BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10954
(562 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 144/191 (75%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ YTHEVVT
Sbjct: 106 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 165
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 225
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 226 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 286 FQDVTKPVPHL 296
Score = 221 bits (563), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 106/163 (65%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFE + QDLK F+
Sbjct: 36 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASA 95
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 96 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ YTHEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 193 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 252
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 144/191 (75%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ YTHEVVT
Sbjct: 107 SYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 287 FQDVTKPVPHL 297
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/163 (66%), Positives = 130/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 37 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 96
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 97 LTGIPLP--LIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ YTHEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 144/191 (75%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ YTHEVVT
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 287 FQDVTKPVPHL 297
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/163 (66%), Positives = 130/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 37 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 96
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 97 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ YTHEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 144/191 (75%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ YTHEVVT
Sbjct: 106 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 165
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 225
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 226 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 286 FQDVTKPVPHL 296
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/163 (66%), Positives = 130/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 36 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 95
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 96 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ YTHEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 193 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 252
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 144/191 (75%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ YTHEVVT
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 287 FQDVTKPVPHL 297
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/163 (66%), Positives = 130/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 37 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 96
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 97 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ YTHEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 144/191 (75%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ YTHEVVT
Sbjct: 106 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 165
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 225
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 226 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 286 FQDVTKPVPHL 296
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/163 (66%), Positives = 130/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 36 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 95
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 96 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ YTHEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 193 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 252
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 144/191 (75%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ YTHEVVT
Sbjct: 106 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 165
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 225
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 226 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 286 FQDVTKPVPHL 296
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 108/163 (66%), Positives = 130/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 36 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 95
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 96 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ YTHEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 193 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 252
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 144/191 (75%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ YTHEVVT
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 287 FQDVTKPVPHL 297
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/163 (66%), Positives = 130/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 37 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 96
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 97 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ YTHEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 144/191 (75%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ YTHEVVT
Sbjct: 108 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 167
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 227
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 228 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 288 FQDVTKPVPHL 298
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 108/163 (66%), Positives = 130/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 38 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 97
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 98 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 155
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ YTHEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 156 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 195 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 254
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 144/191 (75%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ YTHEVVT
Sbjct: 114 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 173
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 174 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 233
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 234 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 293
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 294 FQDVTKPVPHL 304
Score = 225 bits (573), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 108/163 (66%), Positives = 130/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 44 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 103
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 104 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 161
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ YTHEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 162 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 204
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 201 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 260
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 144/191 (75%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ YTHEVVT
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 167 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 287 FQDVTKPVPHL 297
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 108/163 (66%), Positives = 130/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 37 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 96
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 97 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ YTHEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEM 197
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 144/191 (75%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ YTHEVVT
Sbjct: 111 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 170
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 230
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 231 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 290
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 291 FQDVTKPVPHL 301
Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 108/163 (66%), Positives = 130/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 41 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 100
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 101 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 158
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ YTHEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 159 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 201
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 198 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 257
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 144/191 (75%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ YTHEVVT
Sbjct: 114 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 173
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 174 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 233
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 234 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 293
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 294 FQDVTKPVPHL 304
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 108/163 (66%), Positives = 130/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 44 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 103
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 104 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 161
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ YTHEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 162 VPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEM 204
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 201 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 260
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 110 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 229
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 230 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 290 FQDVTKPVPHL 300
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 105/163 (64%), Positives = 128/163 (78%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFE + QDLK F+
Sbjct: 40 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASA 99
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 100 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 158 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 197 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 256
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 109 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 168
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 228
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 229 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 289 FQDVTKPVPHL 299
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL DLKDF+
Sbjct: 39 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASA 98
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 99 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 157 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 196 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 255
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 109 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 168
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 228
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 229 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 289 FQDVTKPVPHL 299
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 39 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 98
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 99 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 157 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 196 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 255
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 166
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 287 FQDVTKPVPHL 297
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 37 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 96
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 97 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 155 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 106 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 165
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 225
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 226 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 286 FQDVTKPVPHL 296
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 36 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 95
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 96 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 154 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 193 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 252
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 108 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 167
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 227
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 228 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 288 FQDVTKPVPHL 298
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 38 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 97
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 98 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 155
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 156 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 195 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 254
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 166
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 287 FQDVTKPVPHL 297
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 37 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 96
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 97 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 155 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 110 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 229
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 230 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 290 FQDVTKPVPHL 300
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 40 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASA 99
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 100 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 158 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 197 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 256
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 110 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 229
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 230 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 290 FQDVTKPVPHL 300
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL DLKDF+
Sbjct: 40 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASA 99
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 100 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 158 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 197 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 256
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 166
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 287 FQDVTKPVPHL 297
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 37 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 96
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 97 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 155 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 108 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 167
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 227
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 228 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 288 FQDVTKPVPHL 298
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 38 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 97
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 98 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 155
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 156 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 195 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 254
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 110 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 229
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 230 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 290 FQDVTKPVPHL 300
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 40 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 99
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 100 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 158 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 197 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 256
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 109 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 168
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 228
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 229 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 289 FQDVTKPVPHL 299
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 39 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 98
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 99 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 157 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 196 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 255
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 106 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 165
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 225
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 226 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 286 FQDVTKPVPHL 296
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 36 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 95
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 96 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 154 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 193 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 252
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 111 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 170
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 230
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 231 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 290
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 291 FQDVTKPVPHL 301
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 41 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 100
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 101 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 158
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 159 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 201
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 198 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 257
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 110 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 229
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 230 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 290 FQDVTKPVPHL 300
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 40 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 99
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 100 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 158 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 197 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 256
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 249 bits (635), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKP+N+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 108 SYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 167
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 227
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 228 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 288 FQDVTKPVPHL 298
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/163 (64%), Positives = 128/163 (78%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL DLK F+
Sbjct: 38 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASA 97
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKP+N+LIN GA+KLADFGL+RAF
Sbjct: 98 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG 155
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 156 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 195 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 254
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 249 bits (635), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKP+N+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 109 SYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 168
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 228
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 229 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 289 FQDVTKPVPHL 299
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 106/163 (65%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 39 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 98
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKP+N+LIN GA+KLADFGL+RAF
Sbjct: 99 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG 156
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 157 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 196 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 255
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 249 bits (635), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKP+N+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 110 SYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 229
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 230 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 290 FQDVTKPVPHL 300
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/163 (64%), Positives = 128/163 (78%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL DLK F+
Sbjct: 40 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASA 99
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKP+N+LIN GA+KLADFGL+RAF
Sbjct: 100 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG 157
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 158 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 197 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 256
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKP+N+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 108 SYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 167
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 227
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 228 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 288 FQDVTKPVPHL 298
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/163 (65%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 38 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 97
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKP+N+LIN GA+KLADFGL+RAF
Sbjct: 98 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG 155
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 156 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 195 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 254
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 143/191 (74%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKP+N+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 166
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
Query: 349 FNQVEMVKPTL 359
F V P L
Sbjct: 287 FQDVTKPVPHL 297
Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 130/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLKDF+
Sbjct: 37 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASA 96
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKP+N+LIN GA+KLADFGL+RAF
Sbjct: 97 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG 154
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 155 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 112/182 (61%), Positives = 140/182 (76%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
SYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF +P+ Y HEVVT
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 166
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR PEILLG K YST VDIWS GCIF+EM+T++ LF GDSEIDQLFRIFRTLGTP E
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
VWPGV+ +P YK FP+W + FS+++ D + S+++ DP +R+SAK L H +
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
Query: 349 FN 350
F
Sbjct: 287 FQ 288
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-- 66
R + EGVPSTA+REIS+LKEL HPN+++L DVI + KL+LVFEFL QDLK F+
Sbjct: 37 RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 96
Query: 67 -TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T +P+P L KSYL+QLL+ L +CHS R++HRDLKPQN+LIN GA+KLADFGL+RAF
Sbjct: 97 LTGIPLP--LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+P+ Y HEVVTLWYR PEILLG K YST VDIWS GCIF+EM
Sbjct: 155 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +T++ LF GDSEIDQLFRIFRTLGTP E VWPGV+ +P YK FP+W + FS+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 103/183 (56%), Positives = 134/183 (73%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
S+L QLL + YCH RR++HRDLKPQN+LIN+ G LK+ADFGL+RAF IP+ +YTHEVVT
Sbjct: 104 SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVT 163
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR P++L+G+K YSTT+DIWS GCIF+EM+ LF G SE DQL RIFR LGTP+
Sbjct: 164 LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSK 223
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
WP V++LP Y +F + P + L D +D+ SK++ LDP QR++AK L+H Y
Sbjct: 224 NWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
Query: 349 FNQ 351
F +
Sbjct: 284 FKE 286
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 96/154 (62%), Positives = 121/154 (78%)
Query: 15 EGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPA 74
EG+PST +REIS+LKELKH N+++L+DVI +L LVFE L QDLK L +
Sbjct: 41 EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV 100
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
AKS+L QLL + YCH RR++HRDLKPQN+LIN+ G LK+ADFGL+RAF IP+ +YTHE
Sbjct: 101 TAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVTLWYR P++L+G+K YSTT+DIWS GCIF+EM
Sbjct: 161 VVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEM 194
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E + LF G SE DQL RIFR LGTP+ WP V++LP Y +F + P + L
Sbjct: 191 FAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL 250
Query: 549 NLPDPLAVDVFSRV 562
D +D+ S++
Sbjct: 251 KGLDESGIDLLSKM 264
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 103/183 (56%), Positives = 134/183 (73%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
S+L QLL + YCH RR++HRDLKPQN+LIN+ G LK+ADFGL+RAF IP+ +YTHEVVT
Sbjct: 104 SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVT 163
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR P++L+G+K YSTT+DIWS GCIF+EM+ LF G SE DQL RIFR LGTP+
Sbjct: 164 LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSK 223
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
WP V++LP Y +F + P + L D +D+ SK++ LDP QR++AK L+H Y
Sbjct: 224 NWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
Query: 349 FNQ 351
F +
Sbjct: 284 FKE 286
Score = 214 bits (545), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 96/154 (62%), Positives = 121/154 (78%)
Query: 15 EGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPA 74
EG+PST +REIS+LKELKH N+++L+DVI +L LVFE L QDLK L +
Sbjct: 41 EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV 100
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
AKS+L QLL + YCH RR++HRDLKPQN+LIN+ G LK+ADFGL+RAF IP+ +YTHE
Sbjct: 101 TAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVTLWYR P++L+G+K YSTT+DIWS GCIF+EM
Sbjct: 161 VVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEM 194
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E + LF G SE DQL RIFR LGTP+ WP V++LP Y +F + P + L
Sbjct: 191 FAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL 250
Query: 549 NLPDPLAVDVFSRV 562
D +D+ S++
Sbjct: 251 KGLDESGIDLLSKM 264
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 102/183 (55%), Positives = 134/183 (73%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
S+L QLL + YCH RR++HRDLKPQN+LIN+ G LK+ADFGL+RAF IP+ +YTHE+VT
Sbjct: 104 SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVT 163
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
LWYR P++L+G+K YSTT+DIWS GCIF+EM+ LF G SE DQL RIFR LGTP+
Sbjct: 164 LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSK 223
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
WP V++LP Y +F + P + L D +D+ SK++ LDP QR++AK L+H Y
Sbjct: 224 NWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
Query: 349 FNQ 351
F +
Sbjct: 284 FKE 286
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 95/154 (61%), Positives = 121/154 (78%)
Query: 15 EGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPA 74
EG+PST +REIS+LKELKH N+++L+DVI +L LVFE L QDLK L +
Sbjct: 41 EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV 100
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
AKS+L QLL + YCH RR++HRDLKPQN+LIN+ G LK+ADFGL+RAF IP+ +YTHE
Sbjct: 101 TAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+VTLWYR P++L+G+K YSTT+DIWS GCIF+EM
Sbjct: 161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEM 194
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E + LF G SE DQL RIFR LGTP+ WP V++LP Y +F + P + L
Sbjct: 191 FAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL 250
Query: 549 NLPDPLAVDVFSRV 562
D +D+ S++
Sbjct: 251 KGLDESGIDLLSKM 264
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 98/155 (63%), Positives = 128/155 (82%)
Query: 15 EGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPA 74
EGVPS+ALREI +LKELKH N++RLHDV+ D KL LVFEF QDLK + + + P
Sbjct: 42 EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPE 101
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
+ KS+L+QLL+ L +CHSR ++HRDLKPQN+LIN++G LKLADFGL+RAF IP+ Y+ E
Sbjct: 102 IVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAE 161
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
VVTLWYRPP++L GAK+YST++D+WSAGCIF+E++
Sbjct: 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA 196
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 136/185 (73%), Gaps = 5/185 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
S+L+QLL+ L +CHSR ++HRDLKPQN+LIN++G LKLADFGL+RAF IP+ Y+ EVVT
Sbjct: 105 SFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVT 164
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT-KKTLFAGDSEIDQLFRIFRTLGTPHE 287
LWYRPP++L GAK+YST++D+WSAGCIF+E+ + LF G+ DQL RIFR LGTP E
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTE 224
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLP--DPLAVDVFSKIMALDPKQRVSAKTILQ 345
+ WP ++KLP YK +P + P S + +P + D+ ++ +P QR+SA+ LQ
Sbjct: 225 EQWPSMTKLPDYKP-YPMY-PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282
Query: 346 HEYFN 350
H YF+
Sbjct: 283 HPYFS 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 27/38 (71%)
Query: 496 KTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYK 533
+ LF G+ DQL RIFR LGTP E+ WP ++KLP YK
Sbjct: 200 RPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 97/155 (62%), Positives = 128/155 (82%)
Query: 15 EGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPA 74
EGVPS+ALREI +LKELKH N++RLHDV+ D KL LVFEF QDLK + + + P
Sbjct: 42 EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPE 101
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
+ KS+L+QLL+ L +CHSR ++HRDLKPQN+LIN++G LKLA+FGL+RAF IP+ Y+ E
Sbjct: 102 IVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE 161
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
VVTLWYRPP++L GAK+YST++D+WSAGCIF+E++
Sbjct: 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA 196
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 136/185 (73%), Gaps = 5/185 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
S+L+QLL+ L +CHSR ++HRDLKPQN+LIN++G LKLA+FGL+RAF IP+ Y+ EVVT
Sbjct: 105 SFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVT 164
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITK-KTLFAGDSEIDQLFRIFRTLGTPHE 287
LWYRPP++L GAK+YST++D+WSAGCIF+E+ + LF G+ DQL RIFR LGTP E
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTE 224
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLP--DPLAVDVFSKIMALDPKQRVSAKTILQ 345
+ WP ++KLP YK +P + P S + +P + D+ ++ +P QR+SA+ LQ
Sbjct: 225 EQWPSMTKLPDYKP-YPMY-PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282
Query: 346 HEYFN 350
H YF+
Sbjct: 283 HPYFS 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 27/38 (71%)
Query: 496 KTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYK 533
+ LF G+ DQL RIFR LGTP E+ WP ++KLP YK
Sbjct: 200 RPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 139/189 (73%), Gaps = 6/189 (3%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-----LKLADFGLSRAFTIPMNRYT 223
S+LYQL+ + +CHSRR +HRDLKPQN+L++ S A LK+ DFGL+RAF IP+ ++T
Sbjct: 136 SFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFT 195
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLG 283
HE++TLWYRPPEILLG++ YST+VDIWS CI++EM+ K LF GDSEIDQLF+IF LG
Sbjct: 196 HEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLG 255
Query: 284 TPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKT 342
P + WPGV+ LP +K FP++R K +L L D +D+ + ++ +DP +R+SAK
Sbjct: 256 LPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKN 315
Query: 343 ILQHEYFNQ 351
L+H YF+
Sbjct: 316 ALEHPYFSH 324
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 123/167 (73%), Gaps = 6/167 (3%)
Query: 7 RPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT 66
R R + EGVP TA+RE+S+LKEL+H N+I L VI + +L L+FE+ DLK ++
Sbjct: 66 RIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDK 125
Query: 67 TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-----LKLADFGLS 121
P V + KS+LYQL+ + +CHSRR +HRDLKPQN+L++ S A LK+ DFGL+
Sbjct: 126 NP-DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184
Query: 122 RAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
RAF IP+ ++THE++TLWYRPPEILLG++ YST+VDIWS CI++EM
Sbjct: 185 RAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEM 231
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 481 AVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDF 536
+ S+D+ + E + K LF GDSEIDQLF+IF LG P + WPGV+ LP +K F
Sbjct: 216 STSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSF 275
Query: 537 PEWRPKKFSEILN 549
P++R K +L
Sbjct: 276 PKFRGKTLKRVLG 288
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 132/185 (71%), Gaps = 1/185 (0%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
YLYQLL + +CH RI+HRDLKPQN+LIN GALKLADFGL+RAF IP+ YTHEVVTL
Sbjct: 124 YLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTL 183
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
WYR P++L+G+K YST+VDIWS GCIF+EMIT K LF G ++ DQL +IF LGTP+
Sbjct: 184 WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPRE 243
Query: 290 WPGVSKLPIYKT-DFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
WP V +LP++K F + K +S I+ +D+ S ++ DP +R+SA+ + H Y
Sbjct: 244 WPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
Query: 349 FNQVE 353
F ++
Sbjct: 304 FKDLD 308
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 99/162 (61%), Positives = 122/162 (75%)
Query: 7 RPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT 66
R R + EG+PSTA+REIS+LKEL HPN++ L DVI + L LVFEF+ +DLK L
Sbjct: 52 RIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE 111
Query: 67 TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI 126
+ + K YLYQLL + +CH RI+HRDLKPQN+LIN GALKLADFGL+RAF I
Sbjct: 112 NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI 171
Query: 127 PMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
P+ YTHEVVTLWYR P++L+G+K YST+VDIWS GCIF+EM
Sbjct: 172 PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEM 213
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 481 AVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKT-D 535
+ S+D+ + E IT K LF G ++ DQL +IF LGTP+ WP V +LP++K
Sbjct: 198 STSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRT 257
Query: 536 FPEWRPKKFSEIL 548
F + K +S I+
Sbjct: 258 FQVFEKKPWSSII 270
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 132/185 (71%), Gaps = 1/185 (0%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
YLYQLL + +CH RI+HRDLKPQN+LIN GALKLADFGL+RAF IP+ YTHEVVTL
Sbjct: 124 YLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTL 183
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
WYR P++L+G+K YST+VDIWS GCIF+EMIT K LF G ++ DQL +IF LGTP+
Sbjct: 184 WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPRE 243
Query: 290 WPGVSKLPIYKT-DFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
WP V +LP++K F + K +S I+ +D+ S ++ DP +R+SA+ + H Y
Sbjct: 244 WPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
Query: 349 FNQVE 353
F ++
Sbjct: 304 FKDLD 308
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 99/162 (61%), Positives = 122/162 (75%)
Query: 7 RPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT 66
R R + EG+PSTA+REIS+LKEL HPN++ L DVI + L LVFEF+ +DLK L
Sbjct: 52 RIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE 111
Query: 67 TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI 126
+ + K YLYQLL + +CH RI+HRDLKPQN+LIN GALKLADFGL+RAF I
Sbjct: 112 NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI 171
Query: 127 PMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
P+ YTHEVVTLWYR P++L+G+K YST+VDIWS GCIF+EM
Sbjct: 172 PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEM 213
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 481 AVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKT-D 535
+ S+D+ + E IT K LF G ++ DQL +IF LGTP+ WP V +LP++K
Sbjct: 198 STSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRT 257
Query: 536 FPEWRPKKFSEIL 548
F + K +S I+
Sbjct: 258 FQVFEKKPWSSII 270
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 201 bits (511), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 91/159 (57%), Positives = 122/159 (76%), Gaps = 5/159 (3%)
Query: 15 EGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-----TPV 69
EG PSTA+REIS++KELKH N++RL+DVI + KL LVFEF+ DLK ++ + TP
Sbjct: 44 EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPR 103
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN 129
+ L K + +QLL+ L +CH +I+HRDLKPQN+LINK G LKL DFGL+RAF IP+N
Sbjct: 104 GLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN 163
Query: 130 RYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
++ EVVTLWYR P++L+G++ YST++DIWS GCI +EM
Sbjct: 164 TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEM 202
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 133/194 (68%), Gaps = 9/194 (4%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
+ +QLL+ L +CH +I+HRDLKPQN+LINK G LKL DFGL+RAF IP+N ++ EVVTL
Sbjct: 113 FQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTL 172
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
WYR P++L+G++ YST++DIWS GCI +EMIT K LF G ++ +QL IF +GTP+E +
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESL 232
Query: 290 WPGVSKLPIYKTDFPEWRPKKFSEIL--NLPDPL---AVDVFSKIMALDPKQRVSAKTIL 344
WP V+KLP Y + + P+ ++L + +PL +D ++ L+P R+SAK L
Sbjct: 233 WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQAL 292
Query: 345 QH----EYFNQVEM 354
H EY++ M
Sbjct: 293 HHPWFAEYYHHASM 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 481 AVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDF 536
+ SID+ E IT K LF G ++ +QL IF +GTP+E +WP V+KLP Y +
Sbjct: 187 STSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNI 246
Query: 537 PEWRPKKFSEIL 548
+ P+ ++L
Sbjct: 247 QQRPPRDLRQVL 258
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 87/155 (56%), Positives = 115/155 (74%)
Query: 15 EGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPA 74
EG P TA+RE+S+LK+LKH N++ LHD+I + L LVFE+L +DLK +L +
Sbjct: 41 EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMH 100
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
K +L+QLL L YCH ++++HRDLKPQN+LIN+ G LKLADFGL+RA +IP Y +E
Sbjct: 101 NVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNE 160
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
VVTLWYRPP+ILLG+ YST +D+W GCIF EM+
Sbjct: 161 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMA 195
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 124/181 (68%), Gaps = 1/181 (0%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
+L+QLL L YCH ++++HRDLKPQN+LIN+ G LKLADFGL+RA +IP Y +EVVTL
Sbjct: 105 FLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTL 164
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
WYRPP+ILLG+ YST +D+W GCIF EM T + LF G + +QL IFR LGTP E+
Sbjct: 165 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEET 224
Query: 290 WPGVSKLPIYKT-DFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
WPG+ +KT ++P++R + D D+ +K++ + + R+SA+ ++H +
Sbjct: 225 WPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284
Query: 349 F 349
F
Sbjct: 285 F 285
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKT-DFPEWRPK 542
++E T + LF G + +QL IFR LGTP E+ WPG+ +KT ++P++R +
Sbjct: 191 FYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAE 245
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 116/189 (61%), Gaps = 4/189 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
++QLL L + HS R++HRDLKPQNIL+ SG +KLADFGL+R ++ M T VVTLW
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLW 184
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PE+LL + Y+T VD+WS GCIF+EM +K LF G S++DQL +I +G P E+ W
Sbjct: 185 YRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 291 PGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFN 350
P LP + F + + + D L D+ K + +P +R+SA + L H YF
Sbjct: 244 PRDVALP--RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
Query: 351 QVEMVKPTL 359
+E K L
Sbjct: 302 DLERCKENL 310
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 114/171 (66%), Gaps = 13/171 (7%)
Query: 9 RSRVQV--EGVPSTALREISVLKELK---HPNVIRLHDVIPV-----DFKLFLVFEFLRQ 58
R RVQ EG+P + +RE++VL+ L+ HPNV+RL DV V + KL LVFE + Q
Sbjct: 44 RVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ 103
Query: 59 DLKDFLQTTPVP-VPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL +L P P VP K ++QLL L + HS R++HRDLKPQNIL+ SG +KLAD
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 163
Query: 118 FGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
FGL+R ++ M T VVTLWYR PE+LL + Y+T VD+WS GCIF+EM
Sbjct: 164 FGLARIYSFQMA-LTSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEM 212
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLP 530
+ E +K LF G S++DQL +I +G P E+ WP LP
Sbjct: 209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP 250
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 113/183 (61%), Gaps = 1/183 (0%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ L+ L Y H I+HRDLKP N+L++++G LKLADFGL+++F P Y H+VVT
Sbjct: 116 AYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVT 175
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
WYR PE+L GA++Y VD+W+ GCI +E++ + GDS++DQL RIF TLGTP E+
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEE 235
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
WP + LP Y T F + I + +D+ + +P R++A L+ +Y
Sbjct: 236 QWPDMCSLPDYVT-FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294
Query: 349 FNQ 351
F+
Sbjct: 295 FSN 297
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 104/154 (67%)
Query: 15 EGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPA 74
+G+ TALREI +L+EL HPN+I L D + LVF+F+ DL+ ++ + + P+
Sbjct: 53 DGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPS 112
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
K+Y+ L+ L Y H I+HRDLKP N+L++++G LKLADFGL+++F P Y H+
Sbjct: 113 HIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQ 172
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT WYR PE+L GA++Y VD+W+ GCI +E+
Sbjct: 173 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 206
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 501 GDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKT 534
GDS++DQL RIF TLGTP E+ WP + LP Y T
Sbjct: 215 GDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 248
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 115/186 (61%), Gaps = 4/186 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
++QLL L + HS R++HRDLKPQNIL+ SG +KLADFGL+R ++ M T VVTLW
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLW 184
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PE+LL + Y+T VD+WS GCIF+EM +K LF G S++DQL +I +G P E+ W
Sbjct: 185 YRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 291 PGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFN 350
P LP + F + + + D L D+ K + +P +R+SA + L H YF
Sbjct: 244 PRDVALP--RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
Query: 351 QVEMVK 356
+E K
Sbjct: 302 DLERCK 307
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 114/171 (66%), Gaps = 13/171 (7%)
Query: 9 RSRVQV--EGVPSTALREISVLKELK---HPNVIRLHDVIPV-----DFKLFLVFEFLRQ 58
R RVQ EG+P + +RE++VL+ L+ HPNV+RL DV V + KL LVFE + Q
Sbjct: 44 RVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ 103
Query: 59 DLKDFLQTTPVP-VPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL +L P P VP K ++QLL L + HS R++HRDLKPQNIL+ SG +KLAD
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 163
Query: 118 FGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
FGL+R ++ M T VVTLWYR PE+LL + Y+T VD+WS GCIF+EM
Sbjct: 164 FGLARIYSFQMA-LTSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEM 212
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLP 530
+ E +K LF G S++DQL +I +G P E+ WP LP
Sbjct: 209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP 250
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 112/180 (62%), Gaps = 4/180 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
++QLL L + HS R++HRDLKPQNIL+ SG +KLADFGL+R ++ M T VVTLW
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLW 184
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PE+LL + Y+T VD+WS GCIF+EM +K LF G S++DQL +I +G P E+ W
Sbjct: 185 YRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 291 PGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFN 350
P LP + F + + + D L D+ K + +P +R+SA + L H YF
Sbjct: 244 PRDVALP--RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 114/171 (66%), Gaps = 13/171 (7%)
Query: 9 RSRVQV--EGVPSTALREISVLKELK---HPNVIRLHDVIPV-----DFKLFLVFEFLRQ 58
R RVQ EG+P + +RE++VL+ L+ HPNV+RL DV V + KL LVFE + Q
Sbjct: 44 RVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ 103
Query: 59 DLKDFLQTTPVP-VPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL +L P P VP K ++QLL L + HS R++HRDLKPQNIL+ SG +KLAD
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 163
Query: 118 FGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
FGL+R ++ M T VVTLWYR PE+LL + Y+T VD+WS GCIF+EM
Sbjct: 164 FGLARIYSFQMA-LTSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEM 212
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLP 530
+ E +K LF G S++DQL +I +G P E+ WP LP
Sbjct: 209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP 250
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 119/193 (61%), Gaps = 8/193 (4%)
Query: 165 FSEMSYLYQ-LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--- 220
SE+ + Q LL L Y H +I+HRD+K N+LI + G LKLADFGL+RAF++ N
Sbjct: 124 LSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 221 -RYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIF 279
RY + VVTLWYRPPE+LLG + Y +D+W AGCI +EM T+ + G++E QL I
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 243
Query: 280 RTLGTPHEDVWPGVSKLPIY-KTDFPEWRPKKFSEILN--LPDPLAVDVFSKIMALDPKQ 336
+ G+ +VWP V +Y K + + + +K + L + DP A+D+ K++ LDP Q
Sbjct: 244 QLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQ 303
Query: 337 RVSAKTILQHEYF 349
R+ + L H++F
Sbjct: 304 RIDSDDALNHDFF 316
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 99/166 (59%), Gaps = 12/166 (7%)
Query: 15 EGVPSTALREISVLKELKHPNVIRLHDVIP--------VDFKLFLVFEFLRQDLKDFLQT 66
EG P TALREI +L+ LKH NV+ L ++ ++LVF+F DL L
Sbjct: 58 EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSN 117
Query: 67 TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI 126
V + K + LL L Y H +I+HRD+K N+LI + G LKLADFGL+RAF++
Sbjct: 118 VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL 177
Query: 127 PM----NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
NRY + VVTLWYRPPE+LLG + Y +D+W AGCI +EM
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIY-KTDFPEWRPKKFSEILN 549
E T+ + G++E QL I + G+ +VWP V +Y K + + + +K + L
Sbjct: 222 EMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLK 281
Query: 550 --LPDPLAVDVFSRV 562
+ DP A+D+ ++
Sbjct: 282 AYVRDPYALDLIDKL 296
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 119/193 (61%), Gaps = 8/193 (4%)
Query: 165 FSEMSYLYQ-LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--- 220
SE+ + Q LL L Y H +I+HRD+K N+LI + G LKLADFGL+RAF++ N
Sbjct: 124 LSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 221 -RYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIF 279
RY + VVTLWYRPPE+LLG + Y +D+W AGCI +EM T+ + G++E QL I
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 243
Query: 280 RTLGTPHEDVWPGVSKLPIY-KTDFPEWRPKKFSEILN--LPDPLAVDVFSKIMALDPKQ 336
+ G+ +VWP V +Y K + + + +K + L + DP A+D+ K++ LDP Q
Sbjct: 244 QLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQ 303
Query: 337 RVSAKTILQHEYF 349
R+ + L H++F
Sbjct: 304 RIDSDDALNHDFF 316
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 99/166 (59%), Gaps = 12/166 (7%)
Query: 15 EGVPSTALREISVLKELKHPNVIRLHDVIPVDFK--------LFLVFEFLRQDLKDFLQT 66
EG P TALREI +L+ LKH NV+ L ++ ++LVF+F DL L
Sbjct: 58 EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN 117
Query: 67 TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI 126
V + K + LL L Y H +I+HRD+K N+LI + G LKLADFGL+RAF++
Sbjct: 118 VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL 177
Query: 127 PM----NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
NRY + VVTLWYRPPE+LLG + Y +D+W AGCI +EM
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIY-KTDFPEWRPKKFSEILN 549
E T+ + G++E QL I + G+ +VWP V +Y K + + + +K + L
Sbjct: 222 EMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLK 281
Query: 550 --LPDPLAVDVFSRV 562
+ DP A+D+ ++
Sbjct: 282 AYVRDPYALDLIDKL 296
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 119/193 (61%), Gaps = 8/193 (4%)
Query: 165 FSEMSYLYQ-LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--- 220
SE+ + Q LL L Y H +I+HRD+K N+LI + G LKLADFGL+RAF++ N
Sbjct: 124 LSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 221 -RYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIF 279
RY + VVTLWYRPPE+LLG + Y +D+W AGCI +EM T+ + G++E QL I
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 243
Query: 280 RTLGTPHEDVWPGVSKLPIY-KTDFPEWRPKKFSEILN--LPDPLAVDVFSKIMALDPKQ 336
+ G+ +VWP V +Y K + + + +K + L + DP A+D+ K++ LDP Q
Sbjct: 244 QLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQ 303
Query: 337 RVSAKTILQHEYF 349
R+ + L H++F
Sbjct: 304 RIDSDDALNHDFF 316
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 99/166 (59%), Gaps = 12/166 (7%)
Query: 15 EGVPSTALREISVLKELKHPNVIRLHDVIPVDFK--------LFLVFEFLRQDLKDFLQT 66
EG P TALREI +L+ LKH NV+ L ++ ++LVF+F DL L
Sbjct: 58 EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN 117
Query: 67 TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI 126
V + K + LL L Y H +I+HRD+K N+LI + G LKLADFGL+RAF++
Sbjct: 118 VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL 177
Query: 127 PM----NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
NRY + VVTLWYRPPE+LLG + Y +D+W AGCI +EM
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIY-KTDFPEWRPKKFSEILN 549
E T+ + G++E QL I + G+ +VWP V +Y K + + + +K + L
Sbjct: 222 EMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLK 281
Query: 550 --LPDPLAVDVFSRV 562
+ DP A+D+ ++
Sbjct: 282 AYVRDPYALDLIDKL 296
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 119/193 (61%), Gaps = 8/193 (4%)
Query: 165 FSEMSYLYQ-LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--- 220
SE+ + Q LL L Y H +I+HRD+K N+LI + G LKLADFGL+RAF++ N
Sbjct: 123 LSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 182
Query: 221 -RYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIF 279
RY + VVTLWYRPPE+LLG + Y +D+W AGCI +EM T+ + G++E QL I
Sbjct: 183 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 242
Query: 280 RTLGTPHEDVWPGVSKLPIY-KTDFPEWRPKKFSEILN--LPDPLAVDVFSKIMALDPKQ 336
+ G+ +VWP V +Y K + + + +K + L + DP A+D+ K++ LDP Q
Sbjct: 243 QLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQ 302
Query: 337 RVSAKTILQHEYF 349
R+ + L H++F
Sbjct: 303 RIDSDDALNHDFF 315
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 99/166 (59%), Gaps = 12/166 (7%)
Query: 15 EGVPSTALREISVLKELKHPNVIRLHDVIPVDFK--------LFLVFEFLRQDLKDFLQT 66
EG P TALREI +L+ LKH NV+ L ++ ++LVF+F DL L
Sbjct: 57 EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN 116
Query: 67 TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI 126
V + K + LL L Y H +I+HRD+K N+LI + G LKLADFGL+RAF++
Sbjct: 117 VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL 176
Query: 127 PM----NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
NRY + VVTLWYRPPE+LLG + Y +D+W AGCI +EM
Sbjct: 177 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIY-KTDFPEWRPKKFSEILN 549
E T+ + G++E QL I + G+ +VWP V +Y K + + + +K + L
Sbjct: 221 EMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLK 280
Query: 550 --LPDPLAVDVFSRV 562
+ DP A+D+ ++
Sbjct: 281 AYVRDPYALDLIDKL 295
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQLL L+Y HS IIHRDLKP N+ +N+ L++ DFGL+R M Y V T W
Sbjct: 137 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY---VATRW 193
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++ K LF G IDQL RI +GTP +V
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVL 253
Query: 291 PGVSK--LPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y P K S I +PLA+D+ +++ LD QRVSA L H Y
Sbjct: 254 AKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAY 313
Query: 349 FNQ 351
F+Q
Sbjct: 314 FSQ 316
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 89/152 (58%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIP-----VDF-KLFLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK LKH NVI L DV DF +++LV + DL + +++ +
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALS--DEHV 133
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQLL L+Y HS IIHRDLKP N+ +N+ L++ DFGL+R M Y V
Sbjct: 134 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY---VA 190
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSK--LPIYKTDFPEWRPKKFSEIL 548
E + K LF G IDQL RI +GTP +V +S Y P K S I
Sbjct: 221 ELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIF 280
Query: 549 NLPDPLAVDVFSRV 562
+PLA+D+ R+
Sbjct: 281 RGANPLAIDLLGRM 294
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQLL L+Y HS IIHRDLKP N+ +N+ L++ DFGL+R M Y V T W
Sbjct: 137 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY---VATRW 193
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++ K LF G IDQL RI +GTP +V
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVL 253
Query: 291 PGVSK--LPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y P K S I +PLA+D+ +++ LD QRVSA L H Y
Sbjct: 254 AKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAY 313
Query: 349 FNQ 351
F+Q
Sbjct: 314 FSQ 316
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 88/152 (57%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIP-----VDF-KLFLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK LKH NVI L DV DF +++LV + DL + ++ +
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALS--DEHV 133
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQLL L+Y HS IIHRDLKP N+ +N+ L++ DFGL+R M Y V
Sbjct: 134 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY---VA 190
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSK--LPIYKTDFPEWRPKKFSEIL 548
E + K LF G IDQL RI +GTP +V +S Y P K S I
Sbjct: 221 ELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIF 280
Query: 549 NLPDPLAVDVFSRV 562
+PLA+D+ R+
Sbjct: 281 RGANPLAIDLLGRM 294
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQLL L+Y HS IIHRDLKP N+ +N+ L++ DFGL+R M Y V T W
Sbjct: 129 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGY---VATRW 185
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++ K LF G IDQL RI +GTP +V
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVL 245
Query: 291 PGVSK--LPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y P K S I +PLA+D+ +++ LD QRVSA L H Y
Sbjct: 246 AKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAY 305
Query: 349 FNQ 351
F+Q
Sbjct: 306 FSQ 308
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 88/152 (57%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIP-----VDF-KLFLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK LKH NVI L DV DF +++LV + DL + ++ +
Sbjct: 68 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALS--DEHV 125
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQLL L+Y HS IIHRDLKP N+ +N+ L++ DFGL+R M Y V
Sbjct: 126 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGY---VA 182
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 214
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSK--LPIYKTDFPEWRPKKFSEIL 548
E + K LF G IDQL RI +GTP +V +S Y P K S I
Sbjct: 213 ELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIF 272
Query: 549 NLPDPLAVDVFSRV 562
+PLA+D+ R+
Sbjct: 273 RGANPLAIDLLGRM 286
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 108/184 (58%), Gaps = 5/184 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L+ LRY H+ IIHRDLKP N+ +N+ LK+ DFGL+R M VVT W
Sbjct: 134 VYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM---XGXVVTRW 190
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PE++L Y+ TVDIWS GCI +EMIT KTLF G +DQL I + GTP +
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 250
Query: 291 PGV--SKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+ + Y PE K F+ IL PLAV++ K++ LD +QRV+A L H Y
Sbjct: 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY 310
Query: 349 FNQV 352
F +
Sbjct: 311 FESL 314
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 90/162 (55%), Gaps = 11/162 (6%)
Query: 13 QVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQT 66
Q E A RE+ +LK ++H NVI L DV D L +LV F+ DL ++
Sbjct: 63 QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH 122
Query: 67 TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI 126
+ + +YQ+L+ LRY H+ IIHRDLKP N+ +N+ LK+ DFGL+R
Sbjct: 123 EKLG--EDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS 180
Query: 127 PMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
M VVT WYR PE++L Y+ TVDIWS GCI +EM
Sbjct: 181 EM---XGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEM 219
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGV--SKLPIYKTDFPEWRPKKFSEIL 548
E IT KTLF G +DQL I + GTP + + + Y PE K F+ IL
Sbjct: 218 EMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASIL 277
Query: 549 NLPDPLAVDVFSRV 562
PLAV++ ++
Sbjct: 278 TNASPLAVNLLEKM 291
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 112/186 (60%), Gaps = 11/186 (5%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 160 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 216
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G I+QL +I R GTP V
Sbjct: 217 YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASV- 275
Query: 291 PGVSKLPI-----YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
+S++P Y P+ + F+++ +PLAVD+ K++ LD +R++A L
Sbjct: 276 --ISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALA 333
Query: 346 HEYFNQ 351
H YF+Q
Sbjct: 334 HPYFSQ 339
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 99 RELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 156
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 157 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 213
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 214 TRWYRAPEIMLNWMHYNMTVDIWSVGCIMAEL 245
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI-----YKTDFPEWRPKKFS 545
E +T +TLF G I+QL +I R GTP V +S++P Y P+ + F+
Sbjct: 244 ELLTGRTLFPGTDHINQLQQIMRLTGTPPASV---ISRMPSHEARNYINSLPQMPKRNFA 300
Query: 546 EILNLPDPLAVDVFSRV 562
++ +PLAVD+ ++
Sbjct: 301 DVFIGANPLAVDLLEKM 317
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 107/183 (58%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L A Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L A Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAEL 216
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 112/183 (61%), Gaps = 4/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+ Q L L + H+ I+HRDLKP+NIL+ G +KLADFGL+R ++ M T VVTLW
Sbjct: 126 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LTPVVVTLW 184
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PE+LL + Y+T VD+WS GCIF+EM +K LF G+SE DQL +IF +G P ED W
Sbjct: 185 YRAPEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 243
Query: 291 PGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFN 350
P LP + FP P+ ++ + + +++ +P +R+SA LQH Y +
Sbjct: 244 PRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 301
Query: 351 QVE 353
+ E
Sbjct: 302 KDE 304
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 104/161 (64%), Gaps = 11/161 (6%)
Query: 17 VPSTALREISVLKELK---HPNVIRLHDVIPV-----DFKLFLVFEFLRQDLKDFLQTTP 68
+P + +RE+++L+ L+ HPNV+RL DV + K+ LVFE + QDL+ +L P
Sbjct: 54 LPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAP 113
Query: 69 VP-VPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP 127
P +P K + Q L L + H+ I+HRDLKP+NIL+ G +KLADFGL+R ++
Sbjct: 114 PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ 173
Query: 128 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
M T VVTLWYR PE+LL + Y+T VD+WS GCIF+EM
Sbjct: 174 MA-LTPVVVTLWYRAPEVLLQS-TYATPVDMWSVGCIFAEM 212
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +K LF G+SE DQL +IF +G P ED WP LP + FP P+ ++
Sbjct: 209 FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP--RGAFPPRGPRPVQSVV 266
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 112/183 (61%), Gaps = 4/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+ Q L L + H+ I+HRDLKP+NIL+ G +KLADFGL+R ++ M + VVTLW
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP-VVVTLW 176
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PE+LL + Y+T VD+WS GCIF+EM +K LF G+SE DQL +IF +G P ED W
Sbjct: 177 YRAPEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 291 PGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFN 350
P LP + FP P+ ++ + + +++ +P +R+SA LQH Y +
Sbjct: 236 PRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 293
Query: 351 QVE 353
+ E
Sbjct: 294 KDE 296
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 11/163 (6%)
Query: 15 EGVPSTALREISVLKELK---HPNVIRLHDVIPV-----DFKLFLVFEFLRQDLKDFLQT 66
EG+P + +RE+++L+ L+ HPNV+RL DV + K+ LVFE + QDL+ +L
Sbjct: 44 EGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDK 103
Query: 67 TPVP-VPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
P P +P K + Q L L + H+ I+HRDLKP+NIL+ G +KLADFGL+R ++
Sbjct: 104 APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS 163
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
M + VVTLWYR PE+LL Y+T VD+WS GCIF+EM
Sbjct: 164 YQMALFP-VVVTLWYRAPEVLL-QSTYATPVDMWSVGCIFAEM 204
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +K LF G+SE DQL +IF +G P ED WP LP + FP P+ ++
Sbjct: 201 FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP--RGAFPPRGPRPVQSVV 258
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 111/183 (60%), Gaps = 4/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+ Q L L + H+ I+HRDLKP+NIL+ G +KLADFGL+R ++ M VVTLW
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LAPVVVTLW 176
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PE+LL + Y+T VD+WS GCIF+EM +K LF G+SE DQL +IF +G P ED W
Sbjct: 177 YRAPEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 291 PGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFN 350
P LP + FP P+ ++ + + +++ +P +R+SA LQH Y +
Sbjct: 236 PRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 293
Query: 351 QVE 353
+ E
Sbjct: 294 KDE 296
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 104/163 (63%), Gaps = 11/163 (6%)
Query: 15 EGVPSTALREISVLKELK---HPNVIRLHDVIPV-----DFKLFLVFEFLRQDLKDFLQT 66
EG+P + +RE+++L+ L+ HPNV+RL DV + K+ LVFE + QDL+ +L
Sbjct: 44 EGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDK 103
Query: 67 TPVP-VPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
P P +P K + Q L L + H+ I+HRDLKP+NIL+ G +KLADFGL+R ++
Sbjct: 104 APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS 163
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
M VVTLWYR PE+LL Y+T VD+WS GCIF+EM
Sbjct: 164 YQMA-LAPVVVTLWYRAPEVLL-QSTYATPVDMWSVGCIFAEM 204
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +K LF G+SE DQL +IF +G P ED WP LP + FP P+ ++
Sbjct: 201 FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP--RGAFPPRGPRPVQSVV 258
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY---VATRW 193
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 253
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 254 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 313
Query: 349 FNQ 351
F Q
Sbjct: 314 FAQ 316
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 87/152 (57%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV +F ++LV + DL + ++ +
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 133
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY---VA 190
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 221 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 280
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 281 IGANPLAVDLLEKM 294
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 111/183 (60%), Gaps = 4/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+ Q L L + H+ I+HRDLKP+NIL+ G +KLADFGL+R ++ M VVTLW
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LDPVVVTLW 176
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PE+LL + Y+T VD+WS GCIF+EM +K LF G+SE DQL +IF +G P ED W
Sbjct: 177 YRAPEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 291 PGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFN 350
P LP + FP P+ ++ + + +++ +P +R+SA LQH Y +
Sbjct: 236 PRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 293
Query: 351 QVE 353
+ E
Sbjct: 294 KDE 296
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 104/163 (63%), Gaps = 11/163 (6%)
Query: 15 EGVPSTALREISVLKELK---HPNVIRLHDVIPV-----DFKLFLVFEFLRQDLKDFLQT 66
EG+P + +RE+++L+ L+ HPNV+RL DV + K+ LVFE + QDL+ +L
Sbjct: 44 EGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDK 103
Query: 67 TPVP-VPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
P P +P K + Q L L + H+ I+HRDLKP+NIL+ G +KLADFGL+R ++
Sbjct: 104 APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS 163
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
M VVTLWYR PE+LL Y+T VD+WS GCIF+EM
Sbjct: 164 YQMA-LDPVVVTLWYRAPEVLL-QSTYATPVDMWSVGCIFAEM 204
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 548
+ E +K LF G+SE DQL +IF +G P ED WP LP + FP P+ ++
Sbjct: 201 FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP--RGAFPPRGPRPVQSVV 258
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY---VATRW 189
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 249
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 250 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 309
Query: 349 FNQ 351
F Q
Sbjct: 310 FAQ 312
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 129
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY---VA 186
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 217 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 276
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 277 IGANPLAVDLLEKM 290
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VATRW 194
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314
Query: 349 FNQ 351
F Q
Sbjct: 315 FAQ 317
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 134
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VA 191
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 222 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 281
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 282 IGANPLAVDLLEKM 295
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VATRW 194
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314
Query: 349 FNQ 351
F Q
Sbjct: 315 FAQ 317
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 134
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VA 191
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 222 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 281
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 282 IGANPLAVDLLEKM 295
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VATRW 194
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314
Query: 349 FNQ 351
F Q
Sbjct: 315 FAQ 317
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 87/152 (57%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV +F ++LV + DL + ++ +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 134
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VA 191
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 222 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 281
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 282 IGANPLAVDLLEKM 295
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 193
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 253
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 254 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 313
Query: 349 FNQ 351
F Q
Sbjct: 314 FAQ 316
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 133
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 190
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 221 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVF 280
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 281 IGANPLAVDLLEKM 294
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 87/152 (57%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV +F ++LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRW 192
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 252
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 253 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 312
Query: 349 FNQ 351
F Q
Sbjct: 313 FAQ 315
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 132
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VA 189
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 220 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 279
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 280 IGANPLAVDLLEKM 293
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 151 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 207
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 267
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 268 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 327
Query: 349 FNQ 351
F Q
Sbjct: 328 FAQ 330
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 147
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 204
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 235 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVF 294
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 295 IGANPLAVDLLEKM 308
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRW 192
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 252
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 253 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 312
Query: 349 FNQ 351
F Q
Sbjct: 313 FAQ 315
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 132
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VA 189
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 220 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 279
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 280 IGANPLAVDLLEKM 293
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 87/152 (57%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV +F ++LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 192
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 252
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 253 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 312
Query: 349 FNQ 351
F Q
Sbjct: 313 FAQ 315
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 132
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 189
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 220 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 279
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 280 IGANPLAVDLLEKM 293
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 141 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 197
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 257
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 258 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 317
Query: 349 FNQ 351
F Q
Sbjct: 318 FAQ 320
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 87/152 (57%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV +F ++LV + DL + ++ +
Sbjct: 80 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 137
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 138 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 194
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 195 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 226
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 225 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVF 284
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 285 IGANPLAVDLLEKM 298
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 130 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 186
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 246
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 247 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 306
Query: 349 FNQ 351
F Q
Sbjct: 307 FAQ 309
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 69 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 126
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 127 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 183
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 184 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 215
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 214 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 273
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 274 IGANPLAVDLLEKM 287
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 154 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 210
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 270
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 271 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 330
Query: 349 FNQ 351
F Q
Sbjct: 331 FAQ 333
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 150
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 151 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 207
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 239
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 238 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 297
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 298 IGANPLAVDLLEKM 311
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL R M Y V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGY---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + +++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL R M Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGY---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 189
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 249
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 250 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 309
Query: 349 FNQ 351
F Q
Sbjct: 310 FAQ 312
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 129
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 186
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 217 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 276
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 277 IGANPLAVDLLEKM 290
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 189
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 249
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 250 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 309
Query: 349 FNQ 351
F Q
Sbjct: 310 FAQ 312
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 87/152 (57%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV +F ++LV + DL + ++ +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 129
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 186
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 217 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 276
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 277 IGANPLAVDLLEKM 290
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 150 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 206
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 266
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 267 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 326
Query: 349 FNQ 351
F Q
Sbjct: 327 FAQ 329
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 146
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 147 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 203
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 234 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVF 293
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 294 IGANPLAVDLLEKM 307
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 193
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 253
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 254 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 313
Query: 349 FNQ 351
F Q
Sbjct: 314 FAQ 316
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 87/152 (57%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV +F ++LV + DL + ++ +
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 133
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 190
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 221 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 280
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 281 IGANPLAVDLLEKM 294
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 142 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRW 198
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 258
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 259 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 318
Query: 349 FNQ 351
F Q
Sbjct: 319 FAQ 321
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 87/152 (57%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV +F ++LV + DL + ++ +
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 138
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 139 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VA 195
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 227
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 226 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 285
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 286 IGANPLAVDLLEKM 299
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 194
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314
Query: 349 FNQ 351
F Q
Sbjct: 315 FAQ 317
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 134
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 191
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 222 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 281
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 282 IGANPLAVDLLEKM 295
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 192
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 252
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 253 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 312
Query: 349 FNQ 351
F Q
Sbjct: 313 FAQ 315
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 132
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 189
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 220 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 279
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 280 IGANPLAVDLLEKM 293
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 189
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 249
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 250 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 309
Query: 349 FNQ 351
F Q
Sbjct: 310 FAQ 312
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 129
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 186
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 217 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 276
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 277 IGANPLAVDLLEKM 290
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 150 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 206
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 266
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 267 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 326
Query: 349 FNQ 351
F Q
Sbjct: 327 FAQ 329
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 146
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 147 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 203
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 234 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 293
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 294 IGANPLAVDLLEKM 307
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 143 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 199
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 259
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 260 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 319
Query: 349 FNQ 351
F Q
Sbjct: 320 FAQ 322
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 139
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 196
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 227 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 286
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 287 IGANPLAVDLLEKM 300
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 193
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 253
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 254 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 313
Query: 349 FNQ 351
F Q
Sbjct: 314 FAQ 316
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 87/152 (57%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV +F ++LV + DL + ++ +
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 133
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 190
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 221 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 280
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 281 IGANPLAVDLLEKM 294
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 183
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 244 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303
Query: 349 FNQ 351
F Q
Sbjct: 304 FAQ 306
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLT--DDHV 123
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 180
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 211 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVF 270
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 271 IGANPLAVDLLEKM 284
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 143 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 199
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 259
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 260 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 319
Query: 349 FNQ 351
F Q
Sbjct: 320 FAQ 322
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 139
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 196
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 227 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 286
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 287 IGANPLAVDLLEKM 300
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 151 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 207
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 267
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 268 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 327
Query: 349 FNQ 351
F Q
Sbjct: 328 FAQ 330
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 147
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 204
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 235 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 294
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 295 IGANPLAVDLLEKM 308
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 143 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 199
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 259
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 260 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 319
Query: 349 FNQ 351
F Q
Sbjct: 320 FAQ 322
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 87/152 (57%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV +F ++LV + DL + ++ +
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 139
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 196
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 227 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 286
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 287 IGANPLAVDLLEKM 300
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 183
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 244 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303
Query: 349 FNQ 351
F Q
Sbjct: 304 FAQ 306
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 123
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 180
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 211 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVF 270
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 271 IGANPLAVDLLEKM 284
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 129 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 185
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 245
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 246 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 305
Query: 349 FNQ 351
F Q
Sbjct: 306 FAQ 308
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 68 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 125
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 126 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 182
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 214
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 213 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 272
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 273 IGANPLAVDLLEKM 286
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 142 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 198
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 258
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 259 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 318
Query: 349 FNQ 351
F Q
Sbjct: 319 FAQ 321
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 138
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 139 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 195
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 227
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 226 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 285
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 286 IGANPLAVDLLEKM 299
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 128 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 184
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 244
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 245 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 304
Query: 349 FNQ 351
F Q
Sbjct: 305 FAQ 307
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 124
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 125 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 181
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 213
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 212 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 271
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 272 IGANPLAVDLLEKM 285
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 154 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGY---VATRW 210
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 270
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 271 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 330
Query: 349 FNQ 351
F Q
Sbjct: 331 FAQ 333
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 87/152 (57%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV +F ++LV + DL + ++ +
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 150
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 151 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGY---VA 207
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 239
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 238 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 297
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 298 IGANPLAVDLLEKM 311
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 128 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 184
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 244
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 245 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 304
Query: 349 FNQ 351
F Q
Sbjct: 305 FAQ 307
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 124
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 125 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 181
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 213
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 212 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 271
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 272 IGANPLAVDLLEKM 285
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V T W
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRW 183
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 244 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303
Query: 349 FNQ 351
F Q
Sbjct: 304 FAQ 306
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 123
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M Y V
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 180
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 211 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 270
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 271 IGANPLAVDLLEKM 284
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ D+GL+R M Y V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGY---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ D+GL+R M Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGY---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M T V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGXVATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M T V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGXVA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M + V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M + V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M + V T W
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF---VATRW 183
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 244 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303
Query: 349 FNQ 351
F Q
Sbjct: 304 FAQ 306
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 123
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M + V
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF---VA 180
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 211 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVF 270
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 271 IGANPLAVDLLEKM 284
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ FGL+R M Y V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGY---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 84/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ FGL+R M Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGY---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 112/191 (58%), Gaps = 18/191 (9%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
YL+Q++ + +CHS IIHRD+KP+NIL+++SG +KL DFG +R P Y EV T
Sbjct: 129 YLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATR 188
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGT---PH 286
WYR PE+L+G Y VD+W+ GC+ +EM + LF GDS+IDQL+ I LG H
Sbjct: 189 WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRH 248
Query: 287 ED------VWPGVSKLPIYKTDFP-EWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVS 339
++ V+ GV +LP K P E R K SE++ +D+ K + +DP +R
Sbjct: 249 QELFNKNPVFAGV-RLPEIKEREPLERRYPKLSEVV-------IDLAKKCLHIDPDKRPF 300
Query: 340 AKTILQHEYFN 350
+L H++F
Sbjct: 301 CAELLHHDFFQ 311
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 97/152 (63%)
Query: 17 VPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALA 76
V A+REI +LK+L+H N++ L +V + +LVFEF+ + D L+ P + +
Sbjct: 67 VKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVV 126
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ YL+Q++ + +CHS IIHRD+KP+NIL+++SG +KL DFG +R P Y EV
Sbjct: 127 QKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA 186
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PE+L+G Y VD+W+ GC+ +EM
Sbjct: 187 TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEM 218
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 11/68 (16%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGT---PHED------VWPGVSKLPIYKTDFP-EWR 540
E + LF GDS+IDQL+ I LG H++ V+ GV +LP K P E R
Sbjct: 217 EMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV-RLPEIKEREPLERR 275
Query: 541 PKKFSEIL 548
K SE++
Sbjct: 276 YPKLSEVV 283
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M V T W
Sbjct: 151 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---XGXVATRW 207
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 267
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 268 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 327
Query: 349 FNQ 351
F Q
Sbjct: 328 FAQ 330
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 84/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 147
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DFGL+R M V
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---XGXVA 204
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 235 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVF 294
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 295 IGANPLAVDLLEKM 308
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ D GL+R M Y V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGY---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 84/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ D GL+R M Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGY---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ D GL+R M Y V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGY---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 84/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ D GL+R M Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGY---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ D GL+R M Y V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGY---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 84/152 (55%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV L +LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ D GL+R M Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGY---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
+YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DF L+R M Y V T W
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGY---VATRW 187
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
YR PEI+L Y+ TVDIWS GCI +E++T +TLF G IDQL I R +GTP ++
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+S Y + F+ + +PLAVD+ K++ LD +R++A L H Y
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 349 FNQ 351
F Q
Sbjct: 308 FAQ 310
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPALA 76
RE+ +LK +KH NVI L DV +F ++LV + DL + ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--DDHV 127
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ +YQ+L L+Y HS IIHRDLKP N+ +N+ LK+ DF L+R M Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGY---VA 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PEI+L Y+ TVDIWS GCI +E+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPI--YKTDFPEWRPKKFSEIL 548
E +T +TLF G IDQL I R +GTP ++ +S Y + F+ +
Sbjct: 215 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 274
Query: 549 NLPDPLAVDVFSRV 562
+PLAVD+ ++
Sbjct: 275 IGANPLAVDLLEKM 288
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 112/197 (56%), Gaps = 14/197 (7%)
Query: 162 GCIFSE--MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP 218
G FSE + YL YQ+L+ L+Y HS ++HRDLKP N+ +N+ LK+ DFGL+R
Sbjct: 138 GMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE 197
Query: 219 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
M Y VVT WYR PE++L Y+ TVDIWS GCI +EM+T KTLF G +DQL +I
Sbjct: 198 MTGY---VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 254
Query: 279 FRTLGTPHEDVWPGVSKL-----PIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALD 333
+ G P + V KL Y P+ K F+++ P A D+ K++ LD
Sbjct: 255 LKVTGVPGTEF---VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELD 311
Query: 334 PKQRVSAKTILQHEYFN 350
+R++A L H +F
Sbjct: 312 VDKRLTAAQALTHPFFE 328
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 102/190 (53%), Gaps = 25/190 (13%)
Query: 6 SRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVI-PVD-----FKLFLVFEFLRQD 59
SRP Q E A RE+ +LK ++H NVI L DV P + +LV F++ D
Sbjct: 76 SRP---FQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD 132
Query: 60 LKDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFG 119
L+ + + + +YQ+L+ L+Y HS ++HRDLKP N+ +N+ LK+ DFG
Sbjct: 133 LQKIM---GMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG 189
Query: 120 LSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM----------S 169
L+R M Y VVT WYR PE++L Y+ TVDIWS GCI +EM
Sbjct: 190 LARHADAEMTGY---VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 246
Query: 170 YLYQLLEALR 179
YL QL + L+
Sbjct: 247 YLDQLTQILK 256
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKL-----PIYKTDFPEWRPKKFS 545
E +T KTLF G +DQL +I + G P + V KL Y P+ K F+
Sbjct: 234 EMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF---VQKLNDKAAKSYIQSLPQTPRKDFT 290
Query: 546 EILNLPDPLAVDVFSRV 562
++ P A D+ ++
Sbjct: 291 QLFPRASPQAADLLEKM 307
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 112/197 (56%), Gaps = 14/197 (7%)
Query: 162 GCIFSE--MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP 218
G FSE + YL YQ+L+ L+Y HS ++HRDLKP N+ +N+ LK+ DFGL+R
Sbjct: 120 GLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE 179
Query: 219 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
M Y VVT WYR PE++L Y+ TVDIWS GCI +EM+T KTLF G +DQL +I
Sbjct: 180 MTGY---VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 236
Query: 279 FRTLGTPHEDVWPGVSKL-----PIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALD 333
+ G P + V KL Y P+ K F+++ P A D+ K++ LD
Sbjct: 237 LKVTGVPGTEF---VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELD 293
Query: 334 PKQRVSAKTILQHEYFN 350
+R++A L H +F
Sbjct: 294 VDKRLTAAQALTHPFFE 310
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 102/190 (53%), Gaps = 25/190 (13%)
Query: 6 SRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVI-PVD-----FKLFLVFEFLRQD 59
SRP Q E A RE+ +LK ++H NVI L DV P + +LV F++ D
Sbjct: 58 SRP---FQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD 114
Query: 60 LKDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFG 119
L+ + + + +YQ+L+ L+Y HS ++HRDLKP N+ +N+ LK+ DFG
Sbjct: 115 LQKIM---GLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG 171
Query: 120 LSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM----------S 169
L+R M Y VVT WYR PE++L Y+ TVDIWS GCI +EM
Sbjct: 172 LARHADAEMTGY---VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 228
Query: 170 YLYQLLEALR 179
YL QL + L+
Sbjct: 229 YLDQLTQILK 238
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKL-----PIYKTDFPEWRPKKFS 545
E +T KTLF G +DQL +I + G P + V KL Y P+ K F+
Sbjct: 216 EMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF---VQKLNDKAAKSYIQSLPQTPRKDFT 272
Query: 546 EILNLPDPLAVDVFSRV 562
++ P A D+ ++
Sbjct: 273 QLFPRASPQAADLLEKM 289
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 93/152 (61%)
Query: 17 VPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALA 76
+ ALREI +LK+LKHPN++ L +V +L LVFE+ + L VP L
Sbjct: 45 IKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLV 104
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
KS +Q L+A+ +CH IHRD+KP+NILI K +KL DFG +R T P + Y EV
Sbjct: 105 KSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA 164
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T WYR PE+L+G Y VD+W+ GC+F+E+
Sbjct: 165 TRWYRSPELLVGDTQYGPPVDVWAIGCVFAEL 196
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 108/191 (56%), Gaps = 4/191 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
S +Q L+A+ +CH IHRD+KP+NILI K +KL DFG +R T P + Y EV T
Sbjct: 106 SITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVAT 165
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGT---P 285
WYR PE+L+G Y VD+W+ GC+F+E+++ L+ G S++DQL+ I +TLG
Sbjct: 166 RWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPR 225
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
H+ V+ K PE + N+ P A+ + + +DP +R++ + +L
Sbjct: 226 HQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYP-ALGLLKGCLHMDPTERLTCEQLLH 284
Query: 346 HEYFNQVEMVK 356
H YF + ++
Sbjct: 285 HPYFENIREIE 295
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 107/187 (57%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP- 285
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 286 HEDVWPGVS-KLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
ED+ G++ K Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 251 QEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 311 AHPYLAQ 317
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 90/155 (58%), Gaps = 10/155 (6%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPALA 76
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 71 LREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 130
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTH 133
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 131 --FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTE 188
Query: 134 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 105/188 (55%), Gaps = 6/188 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNR---YTHE 225
+LYQLL L+Y HS ++IHRDLKP N+L+N++ LK+ DFG++R T P T
Sbjct: 164 FLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEY 223
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
V T WYR PE++L Y+ +D+WS GCIF EM+ ++ LF G + + QL I LGTP
Sbjct: 224 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTP 283
Query: 286 HEDVWP--GVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
V G ++ Y P +P + + D A+ + +++ +P R+SA
Sbjct: 284 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAA 343
Query: 344 LQHEYFNQ 351
L+H + +
Sbjct: 344 LRHPFLAK 351
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 111/196 (56%), Gaps = 12/196 (6%)
Query: 22 LREISVLKELKHPNVIRLHDVI-PV----DFK-LFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LRE+ +LK KH N+I + D++ P +FK +++V + + DL + ++ P+
Sbjct: 102 LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-PLTLEH 160
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNR---Y 131
+ +LYQLL L+Y HS ++IHRDLKP N+L+N++ LK+ DFG++R T P
Sbjct: 161 VRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM 220
Query: 132 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRYCHSRRIIHRDL 191
T V T WYR PE++L Y+ +D+WS GCIF EM QL Y H ++I L
Sbjct: 221 TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVL 280
Query: 192 K-PQNILINKSGALKL 206
P +I GA ++
Sbjct: 281 GTPSPAVIQAVGAERV 296
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWP--GVSKLPIYKTDFPEWRPKKFSE 546
+ E + ++ LF G + + QL I LGTP V G ++ Y P +P +
Sbjct: 254 FGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWET 313
Query: 547 ILNLPDPLAVDVFSRV 562
+ D A+ + R+
Sbjct: 314 VYPGADRQALSLLGRM 329
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 105/188 (55%), Gaps = 6/188 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNR---YTHE 225
+LYQLL L+Y HS ++IHRDLKP N+L+N++ LK+ DFG++R T P T
Sbjct: 163 FLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEY 222
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
V T WYR PE++L Y+ +D+WS GCIF EM+ ++ LF G + + QL I LGTP
Sbjct: 223 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTP 282
Query: 286 HEDVWP--GVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
V G ++ Y P +P + + D A+ + +++ +P R+SA
Sbjct: 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAA 342
Query: 344 LQHEYFNQ 351
L+H + +
Sbjct: 343 LRHPFLAK 350
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 111/196 (56%), Gaps = 12/196 (6%)
Query: 22 LREISVLKELKHPNVIRLHDVI-PV----DFK-LFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LRE+ +LK KH N+I + D++ P +FK +++V + + DL + ++ P+
Sbjct: 101 LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-PLTLEH 159
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNR---Y 131
+ +LYQLL L+Y HS ++IHRDLKP N+L+N++ LK+ DFG++R T P
Sbjct: 160 VRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM 219
Query: 132 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRYCHSRRIIHRDL 191
T V T WYR PE++L Y+ +D+WS GCIF EM QL Y H ++I L
Sbjct: 220 TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVL 279
Query: 192 K-PQNILINKSGALKL 206
P +I GA ++
Sbjct: 280 GTPSPAVIQAVGAERV 295
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWP--GVSKLPIYKTDFPEWRPKKFSE 546
+ E + ++ LF G + + QL I LGTP V G ++ Y P +P +
Sbjct: 253 FGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWET 312
Query: 547 ILNLPDPLAVDVFSRV 562
+ D A+ + R+
Sbjct: 313 VYPGADRQALSLLGRM 328
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 112/186 (60%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINK-SGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQLL +L Y HS I HRD+KPQN+L++ SG LKL DFG S I + +
Sbjct: 146 YMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFG-SAKILIAGEPNVSXICS 204
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y+T +DIWS GC+ +E++ + LF G+S IDQL I + LGTP +
Sbjct: 205 RYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSRE 264
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ RP FS++ P A+D+ S+++ P R++A L H
Sbjct: 265 QIKTMN--PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322
Query: 347 EYFNQV 352
+F+++
Sbjct: 323 PFFDEL 328
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 88/160 (55%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFK------LFLVFEFLRQDL-------KDFLQTTPV 69
RE+ +++ +KHPNV+ L + L LV E++ + + QT P+
Sbjct: 81 RELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPM 140
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPM 128
L K Y+YQLL +L Y HS I HRD+KPQN+L++ SG LKL DFG S I
Sbjct: 141 ----LLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFG-SAKILIAG 195
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ + +YR PE++ GA Y+T +DIWS GC+ +E+
Sbjct: 196 EPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAEL 235
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIY-KTDFPEWRPKKFSEILN 549
E + + LF G+S IDQL I + LGTP + ++ P Y + FP+ RP FS++
Sbjct: 234 ELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN--PNYMEHKFPQIRPHPFSKVFR 291
Query: 550 -LPDPLAVDVFSRV 562
P A+D+ SR+
Sbjct: 292 PRTPPDAIDLISRL 305
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 107/175 (61%), Gaps = 17/175 (9%)
Query: 11 RVQVEGVPSTALREISVLKELKHPNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQ--- 65
+++ G+ +A REI++L+ELKHPNVI L V D K++L+F++ DL ++
Sbjct: 55 QIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHR 114
Query: 66 -----TTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILIN----KSGALKLA 116
PV +P + KS LYQ+L+ + Y H+ ++HRDLKP NIL+ + G +K+A
Sbjct: 115 ASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIA 174
Query: 117 DFGLSRAFTIPMNRYTH---EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
D G +R F P+ VVT WYR PE+LLGA+ Y+ +DIW+ GCIF+E+
Sbjct: 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 229
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 119/219 (54%), Gaps = 27/219 (12%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN----KSGALKLADFGLSRAFTIPMNRYTH 224
S LYQ+L+ + Y H+ ++HRDLKP NIL+ + G +K+AD G +R F P+
Sbjct: 132 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 191
Query: 225 ---EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI--------- 272
VVT WYR PE+LLGA+ Y+ +DIW+ GCIF+E++T + +F E
Sbjct: 192 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH 251
Query: 273 DQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNL---------PDPLAV 323
DQL RIF +G P + W + K+P + T ++R ++ + PD A
Sbjct: 252 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAF 311
Query: 324 DVFSKIMALDPKQRVSAKTILQHEYFNQVEMVKPTLAVF 362
+ K++ +DP +R++++ +Q YF +E PT VF
Sbjct: 312 HLLQKLLTMDPIKRITSEQAMQDPYF--LEDPLPTSDVF 348
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 506 DQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFS 545
DQL RIF +G P + W + K+P + T ++R ++
Sbjct: 252 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYT 291
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 108/188 (57%), Gaps = 7/188 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HE 225
+LYQ+L L+Y HS ++HRDLKP N+LIN + LK+ DFGL+R P + +T
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLAR-IADPEHDHTGFLTEX 207
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
V T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
Query: 286 HEDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
++ + + Y P ++++ D A+D+ +++ +P +R++ +
Sbjct: 268 SQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEA 327
Query: 344 LQHEYFNQ 351
L H Y Q
Sbjct: 328 LAHPYLEQ 335
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 91/156 (58%), Gaps = 12/156 (7%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPALA 76
LREI +L +H NVI + D++ +++V + + DL L++ +
Sbjct: 89 LREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY 148
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRY----T 132
+LYQ+L L+Y HS ++HRDLKP N+LIN + LK+ DFGL+R P + + T
Sbjct: 149 --FLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLAR-IADPEHDHTGFLT 205
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 206 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 132/245 (53%), Gaps = 24/245 (9%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL A+ + HS I HRD+KPQN+L+N K LKL DFG ++ IP + +
Sbjct: 146 YIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKL-IPSEPSVAXICS 204
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++LGA Y+ ++D+WS GC+F E+I K LF+G++ IDQL RI + +GTP ++
Sbjct: 205 RFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKE 264
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILNLPDP-LAVDVFSKIMALDPKQRVSAKTILQH 346
+ P Y + FP + K + +IL P LA+D+ +I+ +P R++ + H
Sbjct: 265 QM--IRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAH 322
Query: 347 EYF----NQVEMVKPTLAVFPELGYGGNGCK--DFKPWIAKLIKTQWQRSWDDIPNNKLK 400
+F N E + FP G N + +F P+ + IP N L
Sbjct: 323 PFFDHLRNSYESEVKNNSNFPH-GVNQNIPQLFNFSPYELSI-----------IPGNVLN 370
Query: 401 RIKPK 405
RI PK
Sbjct: 371 RILPK 375
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
Query: 56 LRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALK 114
L + LK F+++ +P L Y+YQL A+ + HS I HRD+KPQN+L+N K LK
Sbjct: 124 LHKVLKSFIRSG-RSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLK 182
Query: 115 LADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
L DFG ++ IP + + +YR PE++LGA Y+ ++D+WS GC+F E+
Sbjct: 183 LCDFGSAKKL-IPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL 235
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 480 DAVSIDVVTYHESITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIY-KTDFPE 538
D SI V + E I K LF+G++ IDQL RI + +GTP ++ + P Y + FP
Sbjct: 224 DLWSIGCV-FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQM--IRMNPHYTEVRFPT 280
Query: 539 WRPKKFSEILNLPDP-LAVDVFSRV 562
+ K + +IL P LA+D+ ++
Sbjct: 281 LKAKDWRKILPEGTPSLAIDLLEQI 305
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPE 246
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 247 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 306
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 307 AHPYLEQ 313
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 66 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 125
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 126 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 219
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 251 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 311 AHPYLEQ 317
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 70 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 129
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 130 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 249 QEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 309 AHPYLEQ 315
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 68 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 127
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 128 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 269 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 328
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 329 AHPYLEQ 335
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 89/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I ++LV + DL L+T +
Sbjct: 88 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHIC 147
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 148 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 205
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 249 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 309 AHPYLEQ 315
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 68 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 127
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 128 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 246
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 247 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 306
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 307 AHPYLEQ 313
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 66 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 125
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 126 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 219
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 249 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 309 AHPYLEQ 315
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 68 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 127
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 128 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 313 AHPYLEQ 319
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 72 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 131
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 132 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 269 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 328
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 329 AHPYLEQ 335
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 88 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 147
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 148 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 205
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 313 AHPYLEQ 319
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 89/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+ +
Sbjct: 72 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHIC 131
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 132 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 137 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 256
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 257 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 316
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 317 AHPYLEQ 323
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 76 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 135
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 136 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 229
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 249 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 309 AHPYLEQ 315
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 68 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 127
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 128 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 253
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 254 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 313
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 314 AHPYLEQ 320
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 73 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 132
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 133 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 135 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 254
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 255 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 314
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 315 AHPYLEQ 321
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 74 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 133
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 134 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 227
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 126 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 245
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 246 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 305
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 306 AHPYLEQ 312
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 65 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 124
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 125 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 218
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 313 AHPYLEQ 319
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 72 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 131
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 132 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 313 AHPYLEQ 319
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 72 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 131
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 132 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 313 AHPYLEQ 319
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 72 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 131
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 132 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 106/188 (56%), Gaps = 7/188 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HE 225
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R P + +T
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLXEX 191
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
V T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 286 HEDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
++ + L Y P ++ + D A+D+ K++ +P +R+ +
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 344 LQHEYFNQ 351
L H Y Q
Sbjct: 312 LAHPYLEQ 319
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 12/157 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 72 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 131
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT--- 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R P + +T
Sbjct: 132 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFL 188
Query: 133 -HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 189 XEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 249 QEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 309 AHPYLEQ 315
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 68 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 127
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 128 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 106/188 (56%), Gaps = 7/188 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HE 225
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R P + +T
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLXEX 192
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
V T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 252
Query: 286 HEDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
++ + L Y P ++ + D A+D+ K++ +P +R+ +
Sbjct: 253 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 312
Query: 344 LQHEYFNQ 351
L H Y Q
Sbjct: 313 LAHPYLEQ 320
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 12/157 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 73 TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 132
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT--- 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R P + +T
Sbjct: 133 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFL 189
Query: 133 -HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 190 XEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YTHEV 226
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T V
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T WYR PEI+L +K Y+ ++DIWS GCI +EM++ + +F G +DQL I LG+P
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 287 EDVWPGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
++ + L Y P ++ + D A+D+ K++ +P +R+ + L
Sbjct: 251 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 345 QHEYFNQ 351
H Y Q
Sbjct: 311 AHPYLAQ 317
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +L +H N+I ++D+I +++V + + DL L+T +
Sbjct: 70 TLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 129
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR---YT 132
+LYQ+L L+Y HS ++HRDLKP N+L+N + LK+ DFGL+R + T
Sbjct: 130 Y--FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
V T WYR PEI+L +K Y+ ++DIWS GCI +EM
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 116/206 (56%), Gaps = 15/206 (7%)
Query: 156 VDIWSAGCIFSEMS--YLYQLLEALRYCHSRRIIHRDLKPQNILINKSG-ALKLADFGLS 212
++ G + E + ++YQLL L+Y HS ++HRDLKP N+ IN LK+ DFGL+
Sbjct: 109 ANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA 168
Query: 213 RAFTIPMNRYTHE------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLF 266
R Y+H+ +VT WYR P +LL Y+ +D+W+AGCIF+EM+T KTLF
Sbjct: 169 RIMD---PHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF 225
Query: 267 AGDSEIDQLFRIFRTLGTPH-EDVWPGVSKLPIY-KTDFPEWRPKKFSEILNLPDPLAVD 324
AG E++Q+ I ++ H ED +S +P+Y + D E K +++L AVD
Sbjct: 226 AGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPH-KPLTQLLPGISREAVD 284
Query: 325 VFSKIMALDPKQRVSAKTILQHEYFN 350
+I+ P R++A+ L H Y +
Sbjct: 285 FLEQILTFSPMDRLTAEEALSHPYMS 310
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 97/169 (57%), Gaps = 26/169 (15%)
Query: 21 ALREISVLKELKHPNVIRLHDVI-PVDFKL-------------FLVFEFLRQDLKDFLQT 66
ALREI +++ L H N++++ +++ P +L ++V E++ DL + L+
Sbjct: 55 ALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQ 114
Query: 67 TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSG-ALKLADFGLSRAFT 125
P+ A+ ++YQLL L+Y HS ++HRDLKP N+ IN LK+ DFGL+R
Sbjct: 115 GPLL--EEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD 172
Query: 126 IPMNRYTHE------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y+H+ +VT WYR P +LL Y+ +D+W+AGCIF+EM
Sbjct: 173 ---PHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 218
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 489 YHESITKKTLFAGDSEIDQLFRIFRTLGTPH-EDVWPGVSKLPIY-KTDFPE 538
+ E +T KTLFAG E++Q+ I ++ H ED +S +P+Y + D E
Sbjct: 215 FAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTE 266
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 102/197 (51%), Gaps = 16/197 (8%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 128 MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF-MMTPYV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP- 285
VT +YR PE++LG Y VDIWS GCI EM+ K LF G IDQ ++ LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 286 -------HEDVWPGVSKLPIYKT-DFPEWRPKKF----SEILNLPDPLAVDVFSKIMALD 333
V V P Y FP+ P SE L A D+ SK++ +D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 334 PKQRVSAKTILQHEYFN 350
P +R+S LQH Y N
Sbjct: 306 PAKRISVDDALQHPYIN 322
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V +F+ ++LV E + +L +Q + +
Sbjct: 70 AYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELDHE 126
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 127 RMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF-MMTPY 185
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 218
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 102/197 (51%), Gaps = 16/197 (8%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 128 MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF-MMTPYV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP- 285
VT +YR PE++LG Y VDIWS GCI EM+ K LF G IDQ ++ LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 286 -------HEDVWPGVSKLPIYKT-DFPEWRPKKF----SEILNLPDPLAVDVFSKIMALD 333
V V P Y FP+ P SE L A D+ SK++ +D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 334 PKQRVSAKTILQHEYFN 350
P +R+S LQH Y N
Sbjct: 306 PAKRISVDDALQHPYIN 322
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V +F+ ++LV E + +L +Q + +
Sbjct: 70 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELDHE 126
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 127 RMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF-MMTPY 185
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 218
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 102/197 (51%), Gaps = 16/197 (8%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 121 MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF-MMTPYV 179
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP- 285
VT +YR PE++LG Y VDIWS GCI EM+ K LF G IDQ ++ LGTP
Sbjct: 180 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238
Query: 286 -------HEDVWPGVSKLPIYKT-DFPEWRPKKF----SEILNLPDPLAVDVFSKIMALD 333
V V P Y FP+ P SE L A D+ SK++ +D
Sbjct: 239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 298
Query: 334 PKQRVSAKTILQHEYFN 350
P +R+S LQH Y N
Sbjct: 299 PAKRISVDDALQHPYIN 315
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V +F+ ++LV E + +L +Q + +
Sbjct: 63 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELDHE 119
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 120 RMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF-MMTPY 178
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 179 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 211
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 101/193 (52%), Gaps = 13/193 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF----------TIPM 219
++YQ L A++ H +IHRDLKP N+LIN + LK+ DFGL+R T
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 220 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIF 279
+ T V T WYR PE++L + YS +D+WS GCI +E+ ++ +F G QL IF
Sbjct: 177 SGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF 236
Query: 280 RTLGTPHEDVWPGVSKLP---IYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQ 336
+GTPH D + P Y P + ++ +P +D+ +++ DP +
Sbjct: 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAK 296
Query: 337 RVSAKTILQHEYF 349
R++AK L+H Y
Sbjct: 297 RITAKEALEHPYL 309
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 90/163 (55%), Gaps = 17/163 (10%)
Query: 21 ALREISVLKELKHPNVIRLHDVI-PVDFK----LFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +LK KH N+I + ++ P F+ ++++ E ++ DL + T +
Sbjct: 56 TLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLS--DDH 113
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF----------T 125
+ ++YQ L A++ H +IHRDLKP N+LIN + LK+ DFGL+R T
Sbjct: 114 IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ T V T WYR PE++L + YS +D+WS GCI +E+
Sbjct: 174 GQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 102/197 (51%), Gaps = 16/197 (8%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 224
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP- 285
VT +YR PE++LG Y VDIWS GCI EM+ K LF G IDQ ++ LGTP
Sbjct: 225 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 283
Query: 286 -------HEDVWPGVSKLPIYKT-DFPEWRPKKF----SEILNLPDPLAVDVFSKIMALD 333
V V P Y FP+ P SE L A D+ SK++ +D
Sbjct: 284 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 343
Query: 334 PKQRVSAKTILQHEYFN 350
P +R+S LQH Y N
Sbjct: 344 PAKRISVDDALQHPYIN 360
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V +F+ ++LV E + +L +Q + +
Sbjct: 108 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHE 164
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPY 223
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 224 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 256
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 102/197 (51%), Gaps = 16/197 (8%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 224
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP- 285
VT +YR PE++LG Y VDIWS GCI EM+ K LF G IDQ ++ LGTP
Sbjct: 225 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 283
Query: 286 -------HEDVWPGVSKLPIYKT-DFPEWRPKKF----SEILNLPDPLAVDVFSKIMALD 333
V V P Y FP+ P SE L A D+ SK++ +D
Sbjct: 284 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 343
Query: 334 PKQRVSAKTILQHEYFN 350
P +R+S LQH Y N
Sbjct: 344 PAKRISVDDALQHPYIN 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V +F+ ++LV E + +L +Q + +
Sbjct: 108 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHE 164
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPY 223
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 224 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 256
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 101/193 (52%), Gaps = 13/193 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF----------TIPM 219
++YQ L A++ H +IHRDLKP N+LIN + LK+ DFGL+R T
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 220 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIF 279
+ T V T WYR PE++L + YS +D+WS GCI +E+ ++ +F G QL IF
Sbjct: 177 SGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF 236
Query: 280 RTLGTPHEDVWPGVSKLP---IYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQ 336
+GTPH D + P Y P + ++ +P +D+ +++ DP +
Sbjct: 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAK 296
Query: 337 RVSAKTILQHEYF 349
R++AK L+H Y
Sbjct: 297 RITAKEALEHPYL 309
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 90/163 (55%), Gaps = 17/163 (10%)
Query: 21 ALREISVLKELKHPNVIRLHDVI-PVDFK----LFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +LK KH N+I + ++ P F+ ++++ E ++ DL + T +
Sbjct: 56 TLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLS--DDH 113
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF----------T 125
+ ++YQ L A++ H +IHRDLKP N+LIN + LK+ DFGL+R T
Sbjct: 114 IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ T V T WYR PE++L + YS +D+WS GCI +E+
Sbjct: 174 GQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 102/197 (51%), Gaps = 16/197 (8%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF-MMTPYV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP- 285
VT +YR PE++LG Y VDIWS GCI EM+ K LF G IDQ ++ LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 286 -------HEDVWPGVSKLPIYKT-DFPEWRPKKF----SEILNLPDPLAVDVFSKIMALD 333
V V P Y FP+ P SE L A D+ SK++ +D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 334 PKQRVSAKTILQHEYFN 350
P +R+S LQH Y N
Sbjct: 306 PAKRISVDDALQHPYIN 322
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V +F+ ++LV E + +L +Q + +
Sbjct: 70 AYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELDHE 126
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF-MMTPY 185
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 218
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 102/197 (51%), Gaps = 16/197 (8%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 129 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 187
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP- 285
VT +YR PE++LG Y VDIWS GCI EM+ K LF G IDQ ++ LGTP
Sbjct: 188 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 246
Query: 286 -------HEDVWPGVSKLPIYKT-DFPEWRPKKF----SEILNLPDPLAVDVFSKIMALD 333
V V P Y FP+ P SE L A D+ SK++ +D
Sbjct: 247 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 306
Query: 334 PKQRVSAKTILQHEYFN 350
P +R+S LQH Y N
Sbjct: 307 PAKRISVDDALQHPYIN 323
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V +F+ ++LV E + +L +Q + +
Sbjct: 71 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHE 127
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 128 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPY 186
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 187 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 102/197 (51%), Gaps = 16/197 (8%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 127 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 185
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP- 285
VT +YR PE++LG Y VDIWS GCI EM+ K LF G IDQ ++ LGTP
Sbjct: 186 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 244
Query: 286 -------HEDVWPGVSKLPIYKT-DFPEWRPKKF----SEILNLPDPLAVDVFSKIMALD 333
V V P Y FP+ P SE L A D+ SK++ +D
Sbjct: 245 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 304
Query: 334 PKQRVSAKTILQHEYFN 350
P +R+S LQH Y N
Sbjct: 305 PAKRISVDDALQHPYIN 321
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V +F+ ++LV E + +L +Q + +
Sbjct: 69 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHE 125
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 126 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPY 184
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 185 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 217
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 102/197 (51%), Gaps = 16/197 (8%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP- 285
VT +YR PE++LG Y VDIWS GCI EM+ K LF G IDQ ++ LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 286 -------HEDVWPGVSKLPIYKT-DFPEWRPKKF----SEILNLPDPLAVDVFSKIMALD 333
V V P Y FP+ P SE L A D+ SK++ +D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 334 PKQRVSAKTILQHEYFN 350
P +R+S LQH Y N
Sbjct: 306 PAKRISVDDALQHPYIN 322
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V +F+ ++LV E + +L +Q + +
Sbjct: 70 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHE 126
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPY 185
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 218
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 102/197 (51%), Gaps = 16/197 (8%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF-MMTPYV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP- 285
VT +YR PE++LG Y VDIWS GCI EM+ K LF G IDQ ++ LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 286 -------HEDVWPGVSKLPIYKT-DFPEWRPKKF----SEILNLPDPLAVDVFSKIMALD 333
V V P Y FP+ P SE L A D+ SK++ +D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 334 PKQRVSAKTILQHEYFN 350
P +R+S LQH Y N
Sbjct: 306 PAKRISVDDALQHPYIN 322
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V +F+ ++LV E + +L +Q + +
Sbjct: 70 AYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHE 126
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF-MMTPY 185
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 218
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 102/197 (51%), Gaps = 16/197 (8%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 129 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 187
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP- 285
VT +YR PE++LG Y VDIWS GCI EM+ K LF G IDQ ++ LGTP
Sbjct: 188 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 246
Query: 286 -------HEDVWPGVSKLPIYKT-DFPEWRPKKF----SEILNLPDPLAVDVFSKIMALD 333
V V P Y FP+ P SE L A D+ SK++ +D
Sbjct: 247 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 306
Query: 334 PKQRVSAKTILQHEYFN 350
P +R+S LQH Y N
Sbjct: 307 PAKRISVDDALQHPYIN 323
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V +F+ ++LV E + +L +Q + +
Sbjct: 71 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHE 127
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 128 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPY 186
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 187 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 102/197 (51%), Gaps = 16/197 (8%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP- 285
VT +YR PE++LG Y VDIWS GCI EM+ K LF G IDQ ++ LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 286 -------HEDVWPGVSKLPIYKT-DFPEWRPKKF----SEILNLPDPLAVDVFSKIMALD 333
V V P Y FP+ P SE L A D+ SK++ +D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 334 PKQRVSAKTILQHEYFN 350
P +R+S LQH Y N
Sbjct: 306 PAKRISVDDALQHPYIN 322
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V +F+ ++LV E + +L +Q + +
Sbjct: 70 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHE 126
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPY 185
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 218
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 102/197 (51%), Gaps = 16/197 (8%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 122 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 180
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP- 285
VT +YR PE++LG Y VDIWS GCI EM+ K LF G IDQ ++ LGTP
Sbjct: 181 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 239
Query: 286 -------HEDVWPGVSKLPIYKT-DFPEWRPKKF----SEILNLPDPLAVDVFSKIMALD 333
V V P Y FP+ P SE L A D+ SK++ +D
Sbjct: 240 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 299
Query: 334 PKQRVSAKTILQHEYFN 350
P +R+S LQH Y N
Sbjct: 300 PAKRISVDDALQHPYIN 316
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V +F+ ++LV E + +L +Q + +
Sbjct: 64 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHE 120
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 121 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPY 179
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 180 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 212
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 102/197 (51%), Gaps = 16/197 (8%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 121 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 179
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP- 285
VT +YR PE++LG Y VDIWS GCI EM+ K LF G IDQ ++ LGTP
Sbjct: 180 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238
Query: 286 -------HEDVWPGVSKLPIYKT-DFPEWRPKKF----SEILNLPDPLAVDVFSKIMALD 333
V V P Y FP+ P SE L A D+ SK++ +D
Sbjct: 239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 298
Query: 334 PKQRVSAKTILQHEYFN 350
P +R+S LQH Y N
Sbjct: 299 PAKRISVDDALQHPYIN 315
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V +F+ ++LV E + +L +Q + +
Sbjct: 63 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHE 119
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 120 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPY 178
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 179 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 211
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 102/197 (51%), Gaps = 16/197 (8%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 122 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 180
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP- 285
VT +YR PE++LG Y VDIWS GCI EM+ K LF G IDQ ++ LGTP
Sbjct: 181 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 239
Query: 286 -------HEDVWPGVSKLPIYKT-DFPEWRPKKF----SEILNLPDPLAVDVFSKIMALD 333
V V P Y FP+ P SE L A D+ SK++ +D
Sbjct: 240 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 299
Query: 334 PKQRVSAKTILQHEYFN 350
P +R+S LQH Y N
Sbjct: 300 PAKRISVDDALQHPYIN 316
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V +F+ ++LV E + +L +Q + +
Sbjct: 64 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHE 120
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 121 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPY 179
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 180 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 212
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 105/200 (52%), Gaps = 24/200 (12%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R + T V
Sbjct: 126 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNF-MMTPYV 184
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
VT +YR PE++LG Y VDIWS GCI E++ +F G IDQ ++ LGTP
Sbjct: 185 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPS 243
Query: 287 ED-----------------VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKI 329
+ +PG++ ++ FP+W SE + A D+ SK+
Sbjct: 244 AEFMAALQPTVRNYVENRPAYPGIA----FEELFPDWIFPSESERDKIKTSQARDLLSKM 299
Query: 330 MALDPKQRVSAKTILQHEYF 349
+ +DP +R+S L+H Y
Sbjct: 300 LVIDPDKRISVDEALRHPYI 319
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ +LK + H N+I L +V +F+ ++LV E + +L Q + +
Sbjct: 68 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL---CQVIHMELDHE 124
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R + T
Sbjct: 125 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNF-MMTPY 183
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI E+
Sbjct: 184 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEL 216
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 104/199 (52%), Gaps = 20/199 (10%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T EV
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPEV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
VT +YR PE++LG Y VDIWS GCI EMI LF G IDQ ++ LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245
Query: 287 EDVWPGVS-KLPIYKTDFPEWRPKKFSEILNLPDPL--------------AVDVFSKIMA 331
+ + + Y + P++ F ++ PD L A D+ SK++
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKL--FPDVLFPADSEHNALKASQARDLLSKMLV 303
Query: 332 LDPKQRVSAKTILQHEYFN 350
+D +R+S LQH Y N
Sbjct: 304 IDASKRISVDEALQHPYIN 322
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V L ++V E + +L +Q + +
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHE 126
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T E
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPE 185
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 218
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 106/186 (56%), Gaps = 4/186 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
++Y +L L H ++HRDL P NIL+ + + + DF L+R T N+ TH V
Sbjct: 139 FMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK-THYVTHR 197
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH-ED 288
WYR PE+++ K ++ VD+WSAGC+ +EM +K LF G + +QL +I +GTP ED
Sbjct: 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIED 257
Query: 289 V--WPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
V + S + + ++ ++ DP+A+D+ +K++ +P++R+S + L+H
Sbjct: 258 VVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317
Query: 347 EYFNQV 352
YF +
Sbjct: 318 PYFESL 323
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVI-----PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALA 76
LREI +L HPN++ L D+ P KL+LV E +R DL + + + P
Sbjct: 77 LREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHI 136
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ ++Y +L L H ++HRDL P NIL+ + + + DF L+R T N+ TH V
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK-THYVT 195
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WYR PE+++ K ++ VD+WSAGC+ +EM
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPH-EDV--WPGVSKLPIYKTDFPEWRPKKFSEI 547
E +K LF G + +QL +I +GTP EDV + S + + ++ +
Sbjct: 226 EMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAV 285
Query: 548 LNLPDPLAVDVFSRV 562
+ DP+A+D+ +++
Sbjct: 286 VPTADPVALDLIAKM 300
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 106/186 (56%), Gaps = 4/186 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
++Y +L L H ++HRDL P NIL+ + + + DF L+R T N+ TH V
Sbjct: 139 FMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK-THYVTHR 197
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH-ED 288
WYR PE+++ K ++ VD+WSAGC+ +EM +K LF G + +QL +I +GTP ED
Sbjct: 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIED 257
Query: 289 V--WPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
V + S + + ++ ++ DP+A+D+ +K++ +P++R+S + L+H
Sbjct: 258 VVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317
Query: 347 EYFNQV 352
YF +
Sbjct: 318 PYFESL 323
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVI-----PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALA 76
LREI +L HPN++ L D+ P KL+LV E +R DL + + + P
Sbjct: 77 LREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHI 136
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
+ ++Y +L L H ++HRDL P NIL+ + + + DF L+R T N+ TH V
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK-THYVT 195
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WYR PE+++ K ++ VD+WSAGC+ +EM
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 491 ESITKKTLFAGDSEIDQLFRIFRTLGTPH-EDV--WPGVSKLPIYKTDFPEWRPKKFSEI 547
E +K LF G + +QL +I +GTP EDV + S + + ++ +
Sbjct: 226 EMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAV 285
Query: 548 LNLPDPLAVDVFSRV 562
+ DP+A+D+ +++
Sbjct: 286 VPTADPVALDLIAKM 300
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 103/199 (51%), Gaps = 20/199 (10%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF-MMTPYV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
VT +YR PE++LG Y VDIWS GCI EMI LF G IDQ ++ LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 287 EDVWPGVS-KLPIYKTDFPEWRPKKFSEILNLPDPL--------------AVDVFSKIMA 331
+ + + Y + P++ F ++ PD L A D+ SK++
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKL--FPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 332 LDPKQRVSAKTILQHEYFN 350
+D +R+S LQH Y N
Sbjct: 304 IDASKRISVDEALQHPYIN 322
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V L ++V E + +L +Q + +
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHE 126
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 127 RMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF-MMTPY 185
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 218
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 103/199 (51%), Gaps = 20/199 (10%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF-MMTPYV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
VT +YR PE++LG Y VDIWS GCI EMI LF G IDQ ++ LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 287 EDVWPGVS-KLPIYKTDFPEWRPKKFSEILNLPDPL--------------AVDVFSKIMA 331
+ + + Y + P++ F ++ PD L A D+ SK++
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKL--FPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 332 LDPKQRVSAKTILQHEYFN 350
+D +R+S LQH Y N
Sbjct: 304 IDASKRISVDEALQHPYIN 322
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V L ++V E + +L +Q + +
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHE 126
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF-MMTPY 185
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 218
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 103/199 (51%), Gaps = 20/199 (10%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF-MMTPYV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
VT +YR PE++LG Y VDIWS GCI EMI LF G IDQ ++ LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 287 EDVWPGVS-KLPIYKTDFPEWRPKKFSEILNLPDPL--------------AVDVFSKIMA 331
+ + + Y + P++ F ++ PD L A D+ SK++
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKL--FPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 332 LDPKQRVSAKTILQHEYFN 350
+D +R+S LQH Y N
Sbjct: 304 IDASKRISVDEALQHPYIN 322
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V L ++V E + +L +Q + +
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHE 126
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF-MMTPY 185
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 218
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 100/194 (51%), Gaps = 13/194 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF----------TIPM 219
++YQ L A++ H +IHRDLKP N+LIN + LK+ DFGL+R T
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 220 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIF 279
+ V T WYR PE++L + YS +D+WS GCI +E+ ++ +F G QL IF
Sbjct: 177 SGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF 236
Query: 280 RTLGTPHEDVWPGVSKLP---IYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQ 336
+GTPH D + P Y P + ++ +P +D+ +++ DP +
Sbjct: 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAK 296
Query: 337 RVSAKTILQHEYFN 350
R++AK L+H Y
Sbjct: 297 RITAKEALEHPYLQ 310
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 89/163 (54%), Gaps = 17/163 (10%)
Query: 21 ALREISVLKELKHPNVIRLHDVI-PVDFK----LFLVFEFLRQDLKDFLQTTPVPVPPAL 75
LREI +LK KH N+I + ++ P F+ ++++ E ++ DL + T +
Sbjct: 56 TLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLS--DDH 113
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF----------T 125
+ ++YQ L A++ H +IHRDLKP N+LIN + LK+ DFGL+R T
Sbjct: 114 IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ V T WYR PE++L + YS +D+WS GCI +E+
Sbjct: 174 GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 104/200 (52%), Gaps = 24/200 (12%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF-MMTPYV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
VT +YR PE++LG Y+ VDIWS GCI E++ +F G IDQ ++ LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPS 245
Query: 287 EDV-----------------WPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKI 329
+ +PG+ ++ FP+W SE + A D+ SK+
Sbjct: 246 AEFMAALQPTVRNYVENRPKYPGIK----FEELFPDWIFPSESERDKIKTSQARDLLSKM 301
Query: 330 MALDPKQRVSAKTILQHEYF 349
+ +DP +R+S L+H Y
Sbjct: 302 LVIDPDKRISVDEALRHPYI 321
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ +LK + H N+I L +V +F+ ++LV E + +L Q + +
Sbjct: 70 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL---CQVIHMELDHE 126
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF-MMTPY 185
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y+ VDIWS GCI E+
Sbjct: 186 VVTRYYRAPEVILGMG-YAANVDIWSVGCIMGEL 218
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 105/201 (52%), Gaps = 24/201 (11%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R EV
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMEPEV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
VT +YR PE++LG Y VDIWS GCI EM+ K LF G IDQ ++ LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP- 244
Query: 287 EDVWPG-VSKLPIYKTDFPEWRPKK--------FSEIL--------NLPDPLAVDVFSKI 329
P + KL ++ E RPK F ++L L A D+ SK+
Sbjct: 245 ---CPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 330 MALDPKQRVSAKTILQHEYFN 350
+ +D +R+S LQH Y N
Sbjct: 302 LVIDASKRISVDEALQHPYIN 322
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V L ++V E + +L +Q + +
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHE 126
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R E
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMEPE 185
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 218
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 103/199 (51%), Gaps = 20/199 (10%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
VT +YR PE++LG Y VDIWS GCI EMI LF G IDQ ++ LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 287 EDVWPGVS-KLPIYKTDFPEWRPKKFSEILNLPDPL--------------AVDVFSKIMA 331
+ + + Y + P++ F ++ PD L A D+ SK++
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKL--FPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 332 LDPKQRVSAKTILQHEYFN 350
+D +R+S LQH Y N
Sbjct: 304 IDASKRISVDEALQHPYIN 322
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V L ++V E + +L +Q + +
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHE 126
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPY 185
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 218
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 103/199 (51%), Gaps = 20/199 (10%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
VT +YR PE++LG Y VDIWS GCI EMI LF G IDQ ++ LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 287 EDVWPGVS-KLPIYKTDFPEWRPKKFSEILNLPDPL--------------AVDVFSKIMA 331
+ + + Y + P++ F ++ PD L A D+ SK++
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKL--FPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 332 LDPKQRVSAKTILQHEYFN 350
+D +R+S LQH Y N
Sbjct: 304 IDASKRISVDEALQHPYIN 322
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V L ++V E + +L +Q + +
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHE 126
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPY 185
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 218
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 104/199 (52%), Gaps = 20/199 (10%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R EV
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMEPEV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
VT +YR PE++LG Y VD+WS GCI EM+ K LF G IDQ ++ LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 287 EDVWPGVS-KLPIYKTDFPEWRPKKFSEILNLPDPL--------------AVDVFSKIMA 331
+ + + Y + P++ F ++ PD L A D+ SK++
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKL--FPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 332 LDPKQRVSAKTILQHEYFN 350
+D +R+S LQH Y N
Sbjct: 304 IDASKRISVDEALQHPYIN 322
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V L ++V E + +L +Q + +
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHE 126
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R E
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMEPE 185
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VD+WS GCI EM
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDLWSVGCIMGEM 218
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 103/199 (51%), Gaps = 20/199 (10%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 129 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 187
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
VT +YR PE++LG Y VDIWS GCI EMI LF G IDQ ++ LGTP
Sbjct: 188 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 246
Query: 287 EDVWPGVS-KLPIYKTDFPEWRPKKFSEILNLPDPL--------------AVDVFSKIMA 331
+ + + Y + P++ F ++ PD L A D+ SK++
Sbjct: 247 PEFMKKLQPTVRTYVENRPKYAGYSFEKL--FPDVLFPADSEHNKLKASQARDLLSKMLV 304
Query: 332 LDPKQRVSAKTILQHEYFN 350
+D +R+S LQH Y N
Sbjct: 305 IDASKRISVDEALQHPYIN 323
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V L ++V E + +L +Q + +
Sbjct: 71 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHE 127
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 128 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPY 186
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 187 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 219
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 103/199 (51%), Gaps = 20/199 (10%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
VT +YR PE++LG Y VDIWS GCI EMI LF G IDQ ++ LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245
Query: 287 EDVWPGVS-KLPIYKTDFPEWRPKKFSEILNLPDPL--------------AVDVFSKIMA 331
+ + + Y + P++ F ++ PD L A D+ SK++
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKL--FPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 332 LDPKQRVSAKTILQHEYFN 350
+D +R+S LQH Y N
Sbjct: 304 IDASKRISVDEALQHPYIN 322
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V L ++V E + +L +Q + +
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHE 126
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPY 185
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 218
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 111/191 (58%), Gaps = 13/191 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y+LL+AL YCHS+ I+HRD+KP N++I+ + L+L D+GL+ F P Y V +
Sbjct: 137 YMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVAS 195
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTP-- 285
+++ PE+L+ ++Y ++D+WS GC+ + MI ++ F G DQL RI + LGT
Sbjct: 196 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEEL 255
Query: 286 -------HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRV 338
H D+ P + + + + W SE +L P A+D+ K++ D +QR+
Sbjct: 256 YGYLKKYHIDLDPHFNDI-LGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRL 314
Query: 339 SAKTILQHEYF 349
+AK ++H YF
Sbjct: 315 TAKEAMEHPYF 325
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 84/137 (61%), Gaps = 7/137 (5%)
Query: 35 NVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCHS 92
N+I+L D + PV LVFE++ DF Q + + + Y+Y+LL+AL YCHS
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINN--TDFKQLYQILTDFDI-RFYMYELLKALDYCHS 150
Query: 93 RRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKV 151
+ I+HRD+KP N++I+ + L+L D+GL+ F P Y V + +++ PE+L+ ++
Sbjct: 151 KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQM 209
Query: 152 YSTTVDIWSAGCIFSEM 168
Y ++D+WS GC+ + M
Sbjct: 210 YDYSLDMWSLGCMLASM 226
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 111/191 (58%), Gaps = 13/191 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y+LL+AL YCHS+ I+HRD+KP N++I+ + L+L D+GL+ F P Y V +
Sbjct: 142 YMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVAS 200
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTP-- 285
+++ PE+L+ ++Y ++D+WS GC+ + MI ++ F G DQL RI + LGT
Sbjct: 201 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEEL 260
Query: 286 -------HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRV 338
H D+ P + + + + W SE +L P A+D+ K++ D +QR+
Sbjct: 261 YGYLKKYHIDLDPHFNDI-LGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRL 319
Query: 339 SAKTILQHEYF 349
+AK ++H YF
Sbjct: 320 TAKEAMEHPYF 330
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 84/137 (61%), Gaps = 7/137 (5%)
Query: 35 NVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCHS 92
N+I+L D + PV LVFE++ DF Q + + + Y+Y+LL+AL YCHS
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINN--TDFKQLYQILTDFDI-RFYMYELLKALDYCHS 155
Query: 93 RRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKV 151
+ I+HRD+KP N++I+ + L+L D+GL+ F P Y V + +++ PE+L+ ++
Sbjct: 156 KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQM 214
Query: 152 YSTTVDIWSAGCIFSEM 168
Y ++D+WS GC+ + M
Sbjct: 215 YDYSLDMWSLGCMLASM 231
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 104/199 (52%), Gaps = 20/199 (10%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 133 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 191
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
VT +YR PE++LG Y VD+WS GCI EM+ K LF G IDQ ++ LGTP
Sbjct: 192 VTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 250
Query: 287 EDVWPGVS-KLPIYKTDFPEWRPKKFSEILNLPDPL--------------AVDVFSKIMA 331
+ + + Y + P++ F ++ PD L A D+ SK++
Sbjct: 251 PEFMKKLQPTVRTYVENRPKYAGYSFEKL--FPDVLFPADSEHNKLKASQARDLLSKMLV 308
Query: 332 LDPKQRVSAKTILQHEYFN 350
+D +R+S LQH Y N
Sbjct: 309 IDASKRISVDEALQHPYIN 327
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V L ++V E + +L +Q + +
Sbjct: 75 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHE 131
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 132 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPY 190
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VD+WS GCI EM
Sbjct: 191 VVTRYYRAPEVILGMG-YKENVDLWSVGCIMGEM 223
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 104/199 (52%), Gaps = 20/199 (10%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 122 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 180
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
VT +YR PE++LG Y VD+WS GCI EM+ K LF G IDQ ++ LGTP
Sbjct: 181 VTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 239
Query: 287 EDVWPGVS-KLPIYKTDFPEWRPKKFSEILNLPDPL--------------AVDVFSKIMA 331
+ + + Y + P++ F ++ PD L A D+ SK++
Sbjct: 240 PEFMKKLQPTVRTYVENRPKYAGYSFEKL--FPDVLFPADSEHNKLKASQARDLLSKMLV 297
Query: 332 LDPKQRVSAKTILQHEYFN 350
+D +R+S LQH Y N
Sbjct: 298 IDASKRISVDEALQHPYIN 316
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V L ++V E + +L +Q + +
Sbjct: 64 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHE 120
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 121 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPY 179
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VD+WS GCI EM
Sbjct: 180 VVTRYYRAPEVILGMG-YKENVDLWSVGCIMGEM 212
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 104/204 (50%), Gaps = 30/204 (14%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRA-----FTIPMNR 221
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R +P
Sbjct: 130 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPF-- 187
Query: 222 YTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRT 281
VVT +YR PE++LG Y VDIWS GCI EMI LF G IDQ ++
Sbjct: 188 ----VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 242
Query: 282 LGTPHEDVWPGVS-KLPIYKTDFPEWRPKKFSEILNLPDPL--------------AVDVF 326
LGTP + + + Y + P++ F ++ PD L A D+
Sbjct: 243 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKL--FPDVLFPADSEHNKLKASQARDLL 300
Query: 327 SKIMALDPKQRVSAKTILQHEYFN 350
SK++ +D +R+S LQH Y N
Sbjct: 301 SKMLVIDASKRISVDEALQHPYIN 324
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 83/159 (52%), Gaps = 21/159 (13%)
Query: 21 ALREISVLKELKHPNVIRLHDVIPVDFKL------FLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V L ++V E + +L +Q + +
Sbjct: 72 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHE 128
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRA-----FTIPMN 129
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R +P
Sbjct: 129 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPF- 187
Query: 130 RYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS GCI EM
Sbjct: 188 -----VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEM 220
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 102/199 (51%), Gaps = 20/199 (10%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF-MMTPYV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
VT +YR PE++LG Y VDIWS G I EMI LF G IDQ ++ LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 287 EDVWPGVS-KLPIYKTDFPEWRPKKFSEILNLPDPL--------------AVDVFSKIMA 331
+ + + Y + P++ F ++ PD L A D+ SK++
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKL--FPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 332 LDPKQRVSAKTILQHEYFN 350
+D +R+S LQH Y N
Sbjct: 304 IDASKRISVDEALQHPYIN 322
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 84/154 (54%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V +F+ +++V E + +L +Q + +
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHE 126
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 127 RMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF-MMTPY 185
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS G I EM
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGVIMGEM 218
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 102/199 (51%), Gaps = 20/199 (10%)
Query: 168 MSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEV 226
MSYL YQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T V
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF-MMTPYV 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
VT +YR PE++LG Y VDIWS G I EMI LF G IDQ ++ LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 287 EDVWPGVS-KLPIYKTDFPEWRPKKFSEILNLPDPL--------------AVDVFSKIMA 331
+ + + Y + P++ F ++ PD L A D+ SK++
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKL--FPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 332 LDPKQRVSAKTILQHEYFN 350
+D +R+S LQH Y N
Sbjct: 304 IDASKRISVDEALQHPYIN 322
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 84/154 (54%), Gaps = 11/154 (7%)
Query: 21 ALREISVLKELKHPNVIRLHDVIP-----VDFK-LFLVFEFLRQDLKDFLQTTPVPVPPA 74
A RE+ ++K + H N+I L +V +F+ +++V E + +L +Q + +
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHE 126
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
LYQ+L +++ HS IIHRDLKP NI++ LK+ DFGL+R T
Sbjct: 127 RMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF-MMTPY 185
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
VVT +YR PE++LG Y VDIWS G I EM
Sbjct: 186 VVTRYYRAPEVILGMG-YKENVDIWSVGVIMGEM 218
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 109/195 (55%), Gaps = 15/195 (7%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y++L+AL YCHS I+HRD+KP N+LI+ + L+L D+GL+ F P Y V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVAS 194
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ ++Y ++D+WS GC+ + MI +K F G DQL RI + LGT E
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--E 252
Query: 288 DVWPGVSKLPIY----------KTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQR 337
D++ + K I + W SE +L P A+D K++ D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 338 VSAKTILQHEYFNQV 352
++A+ ++H YF V
Sbjct: 313 LTAREAMEHPYFYTV 327
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 83/139 (59%), Gaps = 9/139 (6%)
Query: 34 PNVIRLHDVI--PVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLEALRYC 90
PN+I L D++ PV LVFE + D K QT + + Y+Y++L+AL YC
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC 147
Query: 91 HSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 149
HS I+HRD+KP N+LI+ + L+L D+GL+ F P Y V + +++ PE+L+
Sbjct: 148 HSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 150 KVYSTTVDIWSAGCIFSEM 168
++Y ++D+WS GC+ + M
Sbjct: 207 QMYDYSLDMWSLGCMLASM 225
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 15/195 (7%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y++L+AL YCHS I+HRD+KP N++I+ + L+L D+GL+ F P Y V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVAS 194
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ ++Y ++D+WS GC+ + MI +K F G DQL RI + LGT E
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--E 252
Query: 288 DVWPGVSKLPIY----------KTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQR 337
D++ + K I + W SE +L P A+D K++ D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 338 VSAKTILQHEYFNQV 352
++A+ ++H YF V
Sbjct: 313 LTAREAMEHPYFYTV 327
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 9/139 (6%)
Query: 34 PNVIRLHDVI--PVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLEALRYC 90
PN+I L D++ PV LVFE + D K QT + + Y+Y++L+AL YC
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC 147
Query: 91 HSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 149
HS I+HRD+KP N++I+ + L+L D+GL+ F P Y V + +++ PE+L+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 150 KVYSTTVDIWSAGCIFSEM 168
++Y ++D+WS GC+ + M
Sbjct: 207 QMYDYSLDMWSLGCMLASM 225
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 15/195 (7%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y++L+AL YCHS I+HRD+KP N++I+ + L+L D+GL+ F P Y V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVAS 194
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ ++Y ++D+WS GC+ + MI +K F G DQL RI + LGT E
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--E 252
Query: 288 DVWPGVSKLPIY----------KTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQR 337
D++ + K I + W SE +L P A+D K++ D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 338 VSAKTILQHEYFNQV 352
++A+ ++H YF V
Sbjct: 313 LTAREAMEHPYFYTV 327
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 9/139 (6%)
Query: 34 PNVIRLHDVI--PVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLEALRYC 90
PN+I L D++ PV LVFE + D K QT + + Y+Y++L+AL YC
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC 147
Query: 91 HSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 149
HS I+HRD+KP N++I+ + L+L D+GL+ F P Y V + +++ PE+L+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 150 KVYSTTVDIWSAGCIFSEM 168
++Y ++D+WS GC+ + M
Sbjct: 207 QMYDYSLDMWSLGCMLASM 225
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 15/195 (7%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y++L+AL YCHS I+HRD+KP N++I+ + L+L D+GL+ F P Y V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVAS 194
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ ++Y ++D+WS GC+ + MI +K F G DQL RI + LGT E
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--E 252
Query: 288 DVWPGVSKLPIY----------KTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQR 337
D++ + K I + W SE +L P A+D K++ D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 338 VSAKTILQHEYFNQV 352
++A+ ++H YF V
Sbjct: 313 LTAREAMEHPYFYTV 327
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 9/139 (6%)
Query: 34 PNVIRLHDVI--PVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLEALRYC 90
PN+I L D++ PV LVFE + D K QT + + Y+Y++L+AL YC
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC 147
Query: 91 HSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 149
HS I+HRD+KP N++I+ + L+L D+GL+ F P Y V + +++ PE+L+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 150 KVYSTTVDIWSAGCIFSEM 168
++Y ++D+WS GC+ + M
Sbjct: 207 QMYDYSLDMWSLGCMLASM 225
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 15/195 (7%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y++L+AL YCHS I+HRD+KP N++I+ + L+L D+GL+ F P Y V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVAS 194
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ ++Y ++D+WS GC+ + MI +K F G DQL RI + LGT E
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--E 252
Query: 288 DVWPGVSKLPIY----------KTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQR 337
D++ + K I + W SE +L P A+D K++ D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 338 VSAKTILQHEYFNQV 352
++A+ ++H YF V
Sbjct: 313 LTAREAMEHPYFYTV 327
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 9/139 (6%)
Query: 34 PNVIRLHDVI--PVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLEALRYC 90
PN+I L D++ PV LVFE + D K QT + + Y+Y++L+AL YC
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC 147
Query: 91 HSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 149
HS I+HRD+KP N++I+ + L+L D+GL+ F P Y V + +++ PE+L+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 150 KVYSTTVDIWSAGCIFSEM 168
++Y ++D+WS GC+ + M
Sbjct: 207 QMYDYSLDMWSLGCMLASM 225
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 15/195 (7%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y++L+AL YCHS I+HRD+KP N++I+ + L+L D+GL+ F P Y V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVAS 194
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ ++Y ++D+WS GC+ + MI +K F G DQL RI + LGT E
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--E 252
Query: 288 DVWPGVSKLPIY----------KTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQR 337
D++ + K I + W SE +L P A+D K++ D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 338 VSAKTILQHEYFNQV 352
++A+ ++H YF V
Sbjct: 313 LTAREAMEHPYFYTV 327
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 9/139 (6%)
Query: 34 PNVIRLHDVI--PVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLEALRYC 90
PN+I L D++ PV LVFE + D K QT + + Y+Y++L+AL YC
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC 147
Query: 91 HSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 149
HS I+HRD+KP N++I+ + L+L D+GL+ F P Y V + +++ PE+L+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 150 KVYSTTVDIWSAGCIFSEM 168
++Y ++D+WS GC+ + M
Sbjct: 207 QMYDYSLDMWSLGCMLASM 225
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 15/195 (7%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y++L+AL YCHS I+HRD+KP N++I+ + L+L D+GL+ F P Y V +
Sbjct: 134 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVAS 192
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ ++Y ++D+WS GC+ + MI +K F G DQL RI + LGT E
Sbjct: 193 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--E 250
Query: 288 DVWPGVSKLPIY----------KTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQR 337
D++ + K I + W SE +L P A+D K++ D + R
Sbjct: 251 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 310
Query: 338 VSAKTILQHEYFNQV 352
++A+ ++H YF V
Sbjct: 311 LTAREAMEHPYFYTV 325
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 9/139 (6%)
Query: 34 PNVIRLHDVI--PVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLEALRYC 90
PN+I L D++ PV LVFE + D K QT + + Y+Y++L+AL YC
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC 145
Query: 91 HSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 149
HS I+HRD+KP N++I+ + L+L D+GL+ F P Y V + +++ PE+L+
Sbjct: 146 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDY 204
Query: 150 KVYSTTVDIWSAGCIFSEM 168
++Y ++D+WS GC+ + M
Sbjct: 205 QMYDYSLDMWSLGCMLASM 223
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 15/195 (7%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y++L+AL YCHS I+HRD+KP N++I+ + L+L D+GL+ F P Y V +
Sbjct: 135 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVAS 193
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ ++Y ++D+WS GC+ + MI +K F G DQL RI + LGT E
Sbjct: 194 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--E 251
Query: 288 DVWPGVSKLPIY----------KTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQR 337
D++ + K I + W SE +L P A+D K++ D + R
Sbjct: 252 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 311
Query: 338 VSAKTILQHEYFNQV 352
++A+ ++H YF V
Sbjct: 312 LTAREAMEHPYFYTV 326
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 9/139 (6%)
Query: 34 PNVIRLHDVI--PVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLEALRYC 90
PN+I L D++ PV LVFE + D K QT + + Y+Y++L+AL YC
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC 146
Query: 91 HSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 149
HS I+HRD+KP N++I+ + L+L D+GL+ F P Y V + +++ PE+L+
Sbjct: 147 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDY 205
Query: 150 KVYSTTVDIWSAGCIFSEM 168
++Y ++D+WS GC+ + M
Sbjct: 206 QMYDYSLDMWSLGCMLASM 224
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 15/195 (7%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y++L+AL YCHS I+HRD+KP N++I+ + L+L D+GL+ F P Y V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVAS 194
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ ++Y ++D+WS GC+ + MI +K F G DQL RI + LGT E
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--E 252
Query: 288 DVWPGVSKLPIY----------KTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQR 337
D++ + K I + W SE +L P A+D K++ D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 338 VSAKTILQHEYFNQV 352
++A+ ++H YF V
Sbjct: 313 LTAREAMEHPYFYTV 327
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 9/139 (6%)
Query: 34 PNVIRLHDVI--PVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLEALRYC 90
PN+I L D++ PV LVFE + D K QT + + Y+Y++L+AL YC
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC 147
Query: 91 HSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 149
HS I+HRD+KP N++I+ + L+L D+GL+ F P Y V + +++ PE+L+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 150 KVYSTTVDIWSAGCIFSEM 168
++Y ++D+WS GC+ + M
Sbjct: 207 QMYDYSLDMWSLGCMLASM 225
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 15/195 (7%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y++L+AL YCHS I+HRD+KP N++I+ + L+L D+GL+ F P Y V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVAS 194
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ ++Y ++D+WS GC+ + MI +K F G DQL RI + LGT E
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--E 252
Query: 288 DVWPGVSKLPIY----------KTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQR 337
D++ + K I + W SE +L P A+D K++ D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 338 VSAKTILQHEYFNQV 352
++A+ ++H YF V
Sbjct: 313 LTAREAMEHPYFYTV 327
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 9/139 (6%)
Query: 34 PNVIRLHDVI--PVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLEALRYC 90
PN+I L D++ PV LVFE + D K QT + + Y+Y++L+AL YC
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC 147
Query: 91 HSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 149
HS I+HRD+KP N++I+ + L+L D+GL+ F P Y V + +++ PE+L+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 150 KVYSTTVDIWSAGCIFSEM 168
++Y ++D+WS GC+ + M
Sbjct: 207 QMYDYSLDMWSLGCMLASM 225
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 15/195 (7%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y++L+AL YCHS I+HRD+KP N++I+ + L+L D+GL+ F P Y V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVAS 194
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ ++Y ++D+WS GC+ + MI +K F G DQL RI + LGT E
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--E 252
Query: 288 DVWPGVSKLPIY----------KTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQR 337
D++ + K I + W SE +L P A+D K++ D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 338 VSAKTILQHEYFNQV 352
++A+ ++H YF V
Sbjct: 313 LTAREAMEHPYFYTV 327
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 91/151 (60%), Gaps = 10/151 (6%)
Query: 23 REISVLKELKH-PNVIRLHDVI--PVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKS 78
REI +L+ L+ PN+I L D++ PV LVFE + D K QT + +
Sbjct: 80 REIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRF 135
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 137
Y+Y++L+AL YCHS I+HRD+KP N++I+ + L+L D+GL+ F P Y V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVAS 194
Query: 138 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+++ PE+L+ ++Y ++D+WS GC+ + M
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 15/195 (7%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y++L+AL YCHS I+HRD+KP N++I+ + L+L D+GL+ F P Y V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVAS 194
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ ++Y ++D+WS GC+ + MI +K F G DQL RI + LGT E
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--E 252
Query: 288 DVWPGVSKLPIY----------KTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQR 337
D++ + K I + W SE +L P A+D K++ D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 338 VSAKTILQHEYFNQV 352
++A+ ++H YF V
Sbjct: 313 LTAREAMEHPYFYTV 327
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 9/139 (6%)
Query: 34 PNVIRLHDVI--PVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLEALRYC 90
PN+I L D++ PV LVFE + D K QT + + Y+Y++L+AL YC
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLRQT----LTDYDIRFYMYEILKALDYC 147
Query: 91 HSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 149
HS I+HRD+KP N++I+ + L+L D+GL+ F P Y V + +++ PE+L+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 150 KVYSTTVDIWSAGCIFSEM 168
++Y ++D+WS GC+ + M
Sbjct: 207 QMYDYSLDMWSLGCMLASM 225
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 15/195 (7%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y++L+AL YCHS I+HRD+KP N++I+ + L+L D+GL+ F P Y V +
Sbjct: 135 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVAS 193
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ ++Y ++D+WS GC+ + MI +K F G DQL RI + LGT E
Sbjct: 194 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--E 251
Query: 288 DVWPGVSKLPIY----------KTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQR 337
D++ + K I + W SE +L P A+D K++ D + R
Sbjct: 252 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 311
Query: 338 VSAKTILQHEYFNQV 352
++A+ ++H YF V
Sbjct: 312 LTAREAMEHPYFYTV 326
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 9/139 (6%)
Query: 34 PNVIRLHDVI--PVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLEALRYC 90
PN+I L D++ PV LVFE + D K QT + + Y+Y++L+AL YC
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC 146
Query: 91 HSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 149
HS I+HRD+KP N++I+ + L+L D+GL+ F P Y V + +++ PE+L+
Sbjct: 147 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDY 205
Query: 150 KVYSTTVDIWSAGCIFSEM 168
++Y ++D+WS GC+ + M
Sbjct: 206 QMYDYSLDMWSLGCMLASM 224
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 15/195 (7%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y++L+AL YCHS I+HRD+KP N++I+ + L+L D+GL+ F P Y V +
Sbjct: 141 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVAS 199
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ ++Y ++D+WS GC+ + MI +K F G DQL RI + LGT E
Sbjct: 200 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--E 257
Query: 288 DVWPGVSKLPIY----------KTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQR 337
D++ + K I + W SE +L P A+D K++ D + R
Sbjct: 258 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 317
Query: 338 VSAKTILQHEYFNQV 352
++A+ ++H YF V
Sbjct: 318 LTAREAMEHPYFYTV 332
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 9/139 (6%)
Query: 34 PNVIRLHDVI--PVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLEALRYC 90
PN+I L D++ PV LVFE + D K QT + + Y+Y++L+AL YC
Sbjct: 97 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC 152
Query: 91 HSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 149
HS I+HRD+KP N++I+ + L+L D+GL+ F P Y V + +++ PE+L+
Sbjct: 153 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDY 211
Query: 150 KVYSTTVDIWSAGCIFSEM 168
++Y ++D+WS GC+ + M
Sbjct: 212 QMYDYSLDMWSLGCMLASM 230
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 108/192 (56%), Gaps = 15/192 (7%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y++L+AL YCHS I+HRD+KP N++I+ + L+L D+GL+ F P Y V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVAS 194
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ ++Y ++D+WS GC+ + MI +K F G DQL RI + LGT E
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--E 252
Query: 288 DVWPGVSKLPIY----------KTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQR 337
D++ + K I + W SE +L P A+D K++ D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 338 VSAKTILQHEYF 349
++A+ ++H YF
Sbjct: 313 LTAREAMEHPYF 324
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 9/139 (6%)
Query: 34 PNVIRLHDVI--PVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLEALRYC 90
PN+I L D++ PV LVFE + D K QT + + Y+Y++L+AL YC
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC 147
Query: 91 HSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 149
HS I+HRD+KP N++I+ + L+L D+GL+ F P Y V + +++ PE+L+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 150 KVYSTTVDIWSAGCIFSEM 168
++Y ++D+WS GC+ + M
Sbjct: 207 QMYDYSLDMWSLGCMLASM 225
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 113/219 (51%), Gaps = 43/219 (19%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--------TIPM--N 220
+YQL++ ++Y HS ++HRD+KP NIL+N +K+ADFGLSR+F IP+ N
Sbjct: 115 VYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSIN 174
Query: 221 RYTHE-----------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGD 269
T V T WYR PEILLG+ Y+ +D+WS GCI E++ K +F G
Sbjct: 175 ENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234
Query: 270 SEIDQLFRIFRTLGTP-HEDVWPGVSKLPIYKTDFPEWRPK-------------KFSEIL 315
S ++QL RI + P +EDV S P KT + K K+ +L
Sbjct: 235 STMNQLERIIGVIDFPSNEDVESIQS--PFAKTMIESLKEKVEIRQSNKRDIFTKWKNLL 292
Query: 316 NLPDPL------AVDVFSKIMALDPKQRVSAKTILQHEY 348
+P A+D+ K++ +P +R+SA L+H +
Sbjct: 293 LKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPF 331
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 26/172 (15%)
Query: 21 ALREISVLKELK-HPNVIRLHDVIPVDFK--LFLVFEFLRQDLKDFLQTTPVPVPPALAK 77
REI +L EL H N++ L +V+ D ++LVF+++ DL ++ + P +
Sbjct: 55 TFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILE--PVHKQ 112
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--------TIPM- 128
+YQL++ ++Y HS ++HRD+KP NIL+N +K+ADFGLSR+F IP+
Sbjct: 113 YVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLS 172
Query: 129 -NRYTHE-----------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
N T V T WYR PEILLG+ Y+ +D+WS GCI E+
Sbjct: 173 INENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEI 224
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 110/186 (59%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ A LKL DFG ++ ++ + +
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICS 219
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 279
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 280 QIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337
Query: 347 EYFNQV 352
+F+++
Sbjct: 338 SFFDEL 343
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 91/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V E + + + + QT PV
Sbjct: 96 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 155
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ A LKL DFG ++
Sbjct: 156 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 211
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
++ + + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 212 PNVSY-ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 250
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 233 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 276
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 109/186 (58%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ A LKL DFG ++ + + +
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 219
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 279
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 280 QIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337
Query: 347 EYFNQV 352
+F+++
Sbjct: 338 SFFDEL 343
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 90/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V E + + + + QT PV
Sbjct: 96 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 155
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ A LKL DFG ++ +
Sbjct: 156 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 210
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 211 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 250
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 233 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 276
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 110/186 (59%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ A LKL DFG ++ ++ + +
Sbjct: 155 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICS 213
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 214 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 273
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 274 QIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 331
Query: 347 EYFNQV 352
+F+++
Sbjct: 332 SFFDEL 337
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 91/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V E + + + + QT PV
Sbjct: 90 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 149
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ A LKL DFG ++
Sbjct: 150 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 205
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
++ + + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 206 PNVSY-ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 244
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 227 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 270
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 110/186 (59%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ A LKL DFG ++ ++ + +
Sbjct: 163 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICS 221
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 222 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 281
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 282 QIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 339
Query: 347 EYFNQV 352
+F+++
Sbjct: 340 SFFDEL 345
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 91/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V E + + + + QT PV
Sbjct: 98 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 157
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ A LKL DFG ++
Sbjct: 158 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 213
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
++ + + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 214 PNVSY-ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 252
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 235 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 278
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 110/186 (59%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ A LKL DFG ++ ++ + +
Sbjct: 165 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICS 223
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 224 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 283
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 284 QIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 341
Query: 347 EYFNQV 352
+F+++
Sbjct: 342 SFFDEL 347
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 91/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V E + + + + QT PV
Sbjct: 100 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 159
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ A LKL DFG ++
Sbjct: 160 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 215
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
++ + + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 216 PNVSY-ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 254
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 237 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 280
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 110/186 (59%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ A LKL DFG ++ ++ + +
Sbjct: 206 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICS 264
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 265 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 324
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 325 QIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 382
Query: 347 EYFNQV 352
+F+++
Sbjct: 383 SFFDEL 388
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 91/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V E + + + + QT PV
Sbjct: 141 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 200
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ A LKL DFG ++
Sbjct: 201 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 256
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
++ + + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 257 PNVSY-ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 295
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 278 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 321
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 110/186 (59%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++ ++ + +
Sbjct: 132 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICS 190
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 191 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 250
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 251 QIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 308
Query: 347 EYFNQV 352
+F+++
Sbjct: 309 SFFDEL 314
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 91/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V E + + + + QT PV
Sbjct: 67 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 126
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++
Sbjct: 127 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 182
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
++ + + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 183 PNVSY-ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 221
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 204 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 247
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 110/186 (59%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++ ++ + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICS 185
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 246 QIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
Query: 347 EYFNQV 352
+F+++
Sbjct: 304 SFFDEL 309
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 91/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V E + + + + QT PV
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++
Sbjct: 122 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
++ + + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 178 PNVSY-ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 109/186 (58%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ A LKL DFG ++ + + +
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 197
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 257
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 258 QIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 315
Query: 347 EYFNQV 352
+F+++
Sbjct: 316 SFFDEL 321
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 90/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V E + + + + QT PV
Sbjct: 74 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 133
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++ +
Sbjct: 134 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 188
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 189 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 228
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 211 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 254
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 110/186 (59%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ A LKL DFG ++ ++ + +
Sbjct: 140 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICS 198
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 199 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 258
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 259 QIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 316
Query: 347 EYFNQV 352
+F+++
Sbjct: 317 SFFDEL 322
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 91/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V E + + + + QT PV
Sbjct: 75 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 134
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++
Sbjct: 135 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 190
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
++ + + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 191 PNVSY-ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 229
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 212 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 255
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 109/186 (58%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ A LKL DFG ++ + + +
Sbjct: 135 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 193
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 194 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 253
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 254 QIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 311
Query: 347 EYFNQV 352
+F+++
Sbjct: 312 SFFDEL 317
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 90/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V E + + + + QT PV
Sbjct: 70 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 129
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++ +
Sbjct: 130 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 184
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 185 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 224
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 207 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 250
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 110/186 (59%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++ ++ + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICS 185
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 246 QIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
Query: 347 EYFNQV 352
+F+++
Sbjct: 304 SFFDEL 309
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 91/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V E + + + + QT PV
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++
Sbjct: 122 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
++ + + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 178 PNVSY-ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 109/186 (58%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ A LKL DFG ++ + + +
Sbjct: 146 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 204
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 205 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 264
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 265 QIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 322
Query: 347 EYFNQV 352
+F+++
Sbjct: 323 SFFDEL 328
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 90/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V E + + + + QT PV
Sbjct: 81 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 140
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++ +
Sbjct: 141 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 195
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 196 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 235
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 218 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 261
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 110/186 (59%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++ ++ + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICS 185
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 246 QIREMN--PNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
Query: 347 EYFNQV 352
+F+++
Sbjct: 304 SFFDEL 309
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 91/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V E + + + + QT PV
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++
Sbjct: 122 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
++ + + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 178 PNVSY-ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 109/186 (58%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++ + + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 185
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 246 QIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
Query: 347 EYFNQV 352
+F+++
Sbjct: 304 SFFDEL 309
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 90/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V E + + + + QT PV
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++ +
Sbjct: 122 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 176
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 109/186 (58%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++ + + +
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 197
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 257
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 258 QIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 315
Query: 347 EYFNQV 352
+F+++
Sbjct: 316 SFFDEL 321
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 90/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V E + + + + QT PV
Sbjct: 74 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 133
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++ +
Sbjct: 134 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 188
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 189 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 228
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 211 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 254
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 109/186 (58%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++ + + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 185
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 246 QIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
Query: 347 EYFNQV 352
+F+++
Sbjct: 304 SFFDEL 309
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 91/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL DV+ ++ L V E + + + + QT PV
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++ +
Sbjct: 122 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 176
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 109/186 (58%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++ + + +
Sbjct: 128 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 186
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 187 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 246
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 247 QIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 304
Query: 347 EYFNQV 352
+F+++
Sbjct: 305 SFFDEL 310
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 90/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V E + + + + QT PV
Sbjct: 63 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 122
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++ +
Sbjct: 123 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 177
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 178 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 217
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 200 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 243
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 109/186 (58%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++ + + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 185
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 246 QIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
Query: 347 EYFNQV 352
+F+++
Sbjct: 304 SFFDEL 309
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 90/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V E + + + + QT PV
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++ +
Sbjct: 122 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 176
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 109/186 (58%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ A LKL DFG ++ + + +
Sbjct: 131 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 189
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 190 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 249
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 250 QIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 307
Query: 347 EYFNQV 352
+F+++
Sbjct: 308 SFFDEL 313
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 90/160 (56%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V E + + + + QT PV
Sbjct: 66 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 125
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ A LKL DFG ++ +
Sbjct: 126 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 180
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 181 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 220
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 203 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 246
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 109/186 (58%), Gaps = 6/186 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++ + + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICS 185
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+YR PE++ GA Y++++D+WSAGC+ +E++ + +F GDS +DQL I + LGTP +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
Query: 289 VWPGVSKLPIY-KTDFPEWRPKKFSEILN-LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
++ P Y + FP+ + ++++ P A+ + S+++ P R++ H
Sbjct: 246 QIREMN--PNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
Query: 347 EYFNQV 352
+F+++
Sbjct: 304 SFFDEL 309
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 89/160 (55%), Gaps = 19/160 (11%)
Query: 23 REISVLKELKHPNVIRLH----------DVIPVDFKLFLVFEFLRQDLKDFL---QTTPV 69
RE+ ++++L H N++RL D + ++ L V + + + + QT PV
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPV 121
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPM 128
K Y+YQL +L Y HS I HRD+KPQN+L++ + LKL DFG ++ +
Sbjct: 122 ----IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 176
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ + +YR PE++ GA Y++++D+WSAGC+ +E+
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 479 DDAVSIDV----VTYHESITKKTLFAGDSEIDQLFRIFRTLGTP 518
D SIDV E + + +F GDS +DQL I + LGTP
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 96/177 (54%), Gaps = 31/177 (17%)
Query: 22 LREISVLKELKHPNVIRLHD-VIPVDF----KLFLVFEFLRQDLKDFLQTTPVPVPPALA 76
LREI++L LK +IRLHD +IP D +L++V E DLK +T P+ +
Sbjct: 75 LREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKT-PIFLTEQHV 133
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI---------- 126
K+ LY LL ++ H IIHRDLKP N L+N+ ++K+ DFGL+R
Sbjct: 134 KTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDL 193
Query: 127 ----------PMNR-----YTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
P N+ T VVT WYR PE++L + Y+ ++DIWS GCIF+E+
Sbjct: 194 EEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAEL 250
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 102/237 (43%), Gaps = 55/237 (23%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI------------- 217
LY LL ++ H IIHRDLKP N L+N+ ++K+ DFGL+R
Sbjct: 137 LYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEK 196
Query: 218 -------PMNR-----YTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT- 264
P N+ T VVT WYR PE++L + Y+ ++DIWS GCIF+E++
Sbjct: 197 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
Query: 265 ----------LFAGD-----------------SEIDQLFRIFRTLGTPHEDVWPGVSKLP 297
LF G S DQL IF +GTP E+ ++K
Sbjct: 257 HINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQE 316
Query: 298 I--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQV 352
+ Y FP S+ + +D+ ++ + ++R++ L H Y V
Sbjct: 317 VIKYIKLFPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDV 373
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 111/200 (55%), Gaps = 13/200 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y+LL+AL YCHS+ I+HRD+KP N++I+ L+L D+GL+ F P Y V +
Sbjct: 131 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVAS 189
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ + Y ++D+WS GC+F+ MI +K F G DQL +I + LGT
Sbjct: 190 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 249
Query: 288 DVW---------PGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRV 338
+V+ P + L + P W ++ +L P A+D K++ D ++R+
Sbjct: 250 NVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 308
Query: 339 SAKTILQHEYFNQVEMVKPT 358
+A + H YF QV + +
Sbjct: 309 TALEAMTHPYFQQVRAAENS 328
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 82/138 (59%), Gaps = 7/138 (5%)
Query: 34 PNVIRLHDVIPVDFKLF--LVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCH 91
PN+++L D++ L+FE++ DF P + + Y+Y+LL+AL YCH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNN--TDFKVLYPTLTDYDI-RYYIYELLKALDYCH 143
Query: 92 SRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAK 150
S+ I+HRD+KP N++I+ L+L D+GL+ F P Y V + +++ PE+L+ +
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 151 VYSTTVDIWSAGCIFSEM 168
Y ++D+WS GC+F+ M
Sbjct: 203 DYDYSLDMWSLGCMFAGM 220
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 111/200 (55%), Gaps = 13/200 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y+LL+AL YCHS+ I+HRD+KP N++I+ L+L D+GL+ F P Y V +
Sbjct: 132 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVAS 190
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ + Y ++D+WS GC+F+ MI +K F G DQL +I + LGT
Sbjct: 191 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 250
Query: 288 DVW---------PGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRV 338
+V+ P + L + P W ++ +L P A+D K++ D ++R+
Sbjct: 251 NVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 309
Query: 339 SAKTILQHEYFNQVEMVKPT 358
+A + H YF QV + +
Sbjct: 310 TALEAMTHPYFQQVRAAENS 329
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 82/138 (59%), Gaps = 7/138 (5%)
Query: 34 PNVIRLHDVIPVDFKLF--LVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCH 91
PN+++L D++ L+FE++ DF P + + Y+Y+LL+AL YCH
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNN--TDFKVLYPTLTDYDI-RYYIYELLKALDYCH 144
Query: 92 SRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAK 150
S+ I+HRD+KP N++I+ L+L D+GL+ F P Y V + +++ PE+L+ +
Sbjct: 145 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 203
Query: 151 VYSTTVDIWSAGCIFSEM 168
Y ++D+WS GC+F+ M
Sbjct: 204 DYDYSLDMWSLGCMFAGM 221
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 111/200 (55%), Gaps = 13/200 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y+LL+AL YCHS+ I+HRD+KP N++I+ L+L D+GL+ F P Y V +
Sbjct: 131 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVAS 189
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ + Y ++D+WS GC+F+ MI +K F G DQL +I + LGT
Sbjct: 190 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 249
Query: 288 DVW---------PGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRV 338
+V+ P + L + P W ++ +L P A+D K++ D ++R+
Sbjct: 250 NVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 308
Query: 339 SAKTILQHEYFNQVEMVKPT 358
+A + H YF QV + +
Sbjct: 309 TALEAMTHPYFQQVRAAENS 328
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 82/138 (59%), Gaps = 7/138 (5%)
Query: 34 PNVIRLHDVIPVDFKLF--LVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCH 91
PN+++L D++ L+FE++ DF P + + Y+Y+LL+AL YCH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNN--TDFKVLYPTLTDYDI-RYYIYELLKALDYCH 143
Query: 92 SRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAK 150
S+ I+HRD+KP N++I+ L+L D+GL+ F P Y V + +++ PE+L+ +
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 151 VYSTTVDIWSAGCIFSEM 168
Y ++D+WS GC+F+ M
Sbjct: 203 DYDYSLDMWSLGCMFAGM 220
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 111/200 (55%), Gaps = 13/200 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y+LL+AL YCHS+ I+HRD+KP N++I+ L+L D+GL+ F P Y V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVAS 188
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ + Y ++D+WS GC+F+ MI +K F G DQL +I + LGT
Sbjct: 189 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 248
Query: 288 DVW---------PGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRV 338
+V+ P + L + P W ++ +L P A+D K++ D ++R+
Sbjct: 249 NVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 339 SAKTILQHEYFNQVEMVKPT 358
+A + H YF QV + +
Sbjct: 308 TALEAMTHPYFQQVRAAENS 327
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 82/138 (59%), Gaps = 7/138 (5%)
Query: 34 PNVIRLHDVIPVDFKLF--LVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCH 91
PN+++L D++ L+FE++ DF P + + Y+Y+LL+AL YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNN--TDFKVLYPTLTDYDI-RYYIYELLKALDYCH 142
Query: 92 SRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAK 150
S+ I+HRD+KP N++I+ L+L D+GL+ F P Y V + +++ PE+L+ +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 151 VYSTTVDIWSAGCIFSEM 168
Y ++D+WS GC+F+ M
Sbjct: 202 DYDYSLDMWSLGCMFAGM 219
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 111/200 (55%), Gaps = 13/200 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y+LL+AL YCHS+ I+HRD+KP N++I+ L+L D+GL+ F P Y V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVAS 188
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ + Y ++D+WS GC+F+ MI +K F G DQL +I + LGT
Sbjct: 189 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 248
Query: 288 DVW---------PGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRV 338
+V+ P + L + P W ++ +L P A+D K++ D ++R+
Sbjct: 249 NVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 339 SAKTILQHEYFNQVEMVKPT 358
+A + H YF QV + +
Sbjct: 308 TALEAMTHPYFQQVRAAENS 327
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 82/138 (59%), Gaps = 7/138 (5%)
Query: 34 PNVIRLHDVIPVDFKLF--LVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCH 91
PN+++L D++ L+FE++ DF P + + Y+Y+LL+AL YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNN--TDFKVLYPTLTDYDI-RYYIYELLKALDYCH 142
Query: 92 SRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAK 150
S+ I+HRD+KP N++I+ L+L D+GL+ F P Y V + +++ PE+L+ +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 151 VYSTTVDIWSAGCIFSEM 168
Y ++D+WS GC+F+ M
Sbjct: 202 DYDYSLDMWSLGCMFAGM 219
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 111/200 (55%), Gaps = 13/200 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y+LL+AL YCHS+ I+HRD+KP N++I+ L+L D+GL+ F P Y V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVAS 188
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ + Y ++D+WS GC+F+ MI +K F G DQL +I + LGT
Sbjct: 189 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 248
Query: 288 DVW---------PGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRV 338
+V+ P + L + P W ++ +L P A+D K++ D ++R+
Sbjct: 249 NVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 339 SAKTILQHEYFNQVEMVKPT 358
+A + H YF QV + +
Sbjct: 308 TALEAMTHPYFQQVRAAENS 327
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 82/138 (59%), Gaps = 7/138 (5%)
Query: 34 PNVIRLHDVIPVDFKLF--LVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCH 91
PN+++L D++ L+FE++ DF P + + Y+Y+LL+AL YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNN--TDFKVLYPTLTDYDI-RYYIYELLKALDYCH 142
Query: 92 SRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAK 150
S+ I+HRD+KP N++I+ L+L D+GL+ F P Y V + +++ PE+L+ +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 151 VYSTTVDIWSAGCIFSEM 168
Y ++D+WS GC+F+ M
Sbjct: 202 DYDYSLDMWSLGCMFAGM 219
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 109/194 (56%), Gaps = 13/194 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y+LL+AL YCHS+ I+HRD+KP N++I+ L+L D+GL+ F P Y V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVAS 188
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ + Y ++D+WS GC+F+ MI +K F G DQL +I + LGT
Sbjct: 189 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 248
Query: 288 DVW---------PGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRV 338
+V+ P + L + P W ++ +L P A+D K++ D ++R+
Sbjct: 249 NVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 339 SAKTILQHEYFNQV 352
+A + H YF QV
Sbjct: 308 TALEAMTHPYFQQV 321
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 82/138 (59%), Gaps = 7/138 (5%)
Query: 34 PNVIRLHDVIPVDFKLF--LVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCH 91
PN+++L D++ L+FE++ DF P + + Y+Y+LL+AL YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNN--TDFKVLYPTLTDYDI-RYYIYELLKALDYCH 142
Query: 92 SRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAK 150
S+ I+HRD+KP N++I+ L+L D+GL+ F P Y V + +++ PE+L+ +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 151 VYSTTVDIWSAGCIFSEM 168
Y ++D+WS GC+F+ M
Sbjct: 202 DYDYSLDMWSLGCMFAGM 219
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 109/194 (56%), Gaps = 13/194 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y+LL+AL YCHS+ I+HRD+KP N++I+ L+L D+GL+ F P Y V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVAS 188
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ + Y ++D+WS GC+F+ MI +K F G DQL +I + LGT
Sbjct: 189 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 248
Query: 288 DVW---------PGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRV 338
+V+ P + L + P W ++ +L P A+D K++ D ++R+
Sbjct: 249 NVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 339 SAKTILQHEYFNQV 352
+A + H YF QV
Sbjct: 308 TALEAMTHPYFQQV 321
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 82/138 (59%), Gaps = 7/138 (5%)
Query: 34 PNVIRLHDVIPVDFKLF--LVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCH 91
PN+++L D++ L+FE++ DF P + + Y+Y+LL+AL YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNN--TDFKVLYPTLTDYDI-RYYIYELLKALDYCH 142
Query: 92 SRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAK 150
S+ I+HRD+KP N++I+ L+L D+GL+ F P Y V + +++ PE+L+ +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 151 VYSTTVDIWSAGCIFSEM 168
Y ++D+WS GC+F+ M
Sbjct: 202 DYDYSLDMWSLGCMFAGM 219
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 109/194 (56%), Gaps = 13/194 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y+LL+AL YCHS+ I+HRD+KP N++I+ L+L D+GL+ F P Y V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVAS 188
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ + Y ++D+WS GC+F+ MI +K F G DQL +I + LGT
Sbjct: 189 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 248
Query: 288 DVW---------PGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRV 338
+V+ P + L + P W ++ +L P A+D K++ D ++R+
Sbjct: 249 NVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 339 SAKTILQHEYFNQV 352
+A + H YF QV
Sbjct: 308 TALEAMTHPYFQQV 321
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 82/138 (59%), Gaps = 7/138 (5%)
Query: 34 PNVIRLHDVIPVDFKLF--LVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCH 91
PN+++L D++ L+FE++ DF P + + Y+Y+LL+AL YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNN--TDFKVLYPTLTDYDI-RYYIYELLKALDYCH 142
Query: 92 SRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAK 150
S+ I+HRD+KP N++I+ L+L D+GL+ F P Y V + +++ PE+L+ +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 151 VYSTTVDIWSAGCIFSEM 168
Y ++D+WS GC+F+ M
Sbjct: 202 DYDYSLDMWSLGCMFAGM 219
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 105/190 (55%), Gaps = 9/190 (4%)
Query: 170 YLYQLLEALRYCH--SRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEV 226
+L+QL+ ++ H S + HRD+KP N+L+N++ G LKL DFG ++ + P +
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS-PSEPNVAYI 192
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
+ +YR PE++ G + Y+T VDIWS GCIF+EM+ + +F GD+ QL I R LG P
Sbjct: 193 CSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPS 252
Query: 287 EDVW----PGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKT 342
+V P + + +Y + W FS+ A D+ S ++ P++R+
Sbjct: 253 REVLRKLNPSHTDVDLYNSKGIPWS-NVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYE 311
Query: 343 ILQHEYFNQV 352
L H YF+++
Sbjct: 312 ALCHPYFDEL 321
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 111/212 (52%), Gaps = 35/212 (16%)
Query: 23 REISVLKELK---HPNVIRLHDVIPV-------DFKLFLVFEF----LRQDLKDFLQTTP 68
RE+ ++++L HPN+++L D L +V E+ L + +++ +
Sbjct: 65 RELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQV 124
Query: 69 VPVPPALAKSYLYQLLEALRYCH--SRRIIHRDLKPQNILINKS-GALKLADFGLSRAFT 125
P PP L K +L+QL+ ++ H S + HRD+KP N+L+N++ G LKL DFG ++ +
Sbjct: 125 AP-PPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS 183
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM----------SYLYQLL 175
P + + +YR PE++ G + Y+T VDIWS GCIF+EM + QL
Sbjct: 184 -PSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLH 242
Query: 176 EALRY--CHSRRIIHRDLKPQNI---LINKSG 202
E +R C SR ++ R L P + L N G
Sbjct: 243 EIVRVLGCPSREVL-RKLNPSHTDVDLYNSKG 273
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 96/179 (53%), Gaps = 33/179 (18%)
Query: 22 LREISVLKELKHPNVIRLHD-VIPVDFK----LFLVFEFLRQDLKDFLQTTPVPVPPALA 76
LREI++L L H +V+++ D VIP D + L++V E D K +T PV +
Sbjct: 100 LREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRT-PVYLTELHI 158
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN------- 129
K+ LY LL ++Y HS I+HRDLKP N L+N+ ++K+ DFGL+R P N
Sbjct: 159 KTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPI 218
Query: 130 --------------------RYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ T VVT WYR PE++L + Y+ +D+WS GCIF+E+
Sbjct: 219 SPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 60/248 (24%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN-------- 220
+ LY LL ++Y HS I+HRDLKP N L+N+ ++K+ DFGL+R P N
Sbjct: 160 TLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPIS 219
Query: 221 -------------------RYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ T VVT WYR PE++L + Y+ +D+WS GCIF+E++
Sbjct: 220 PREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
Query: 262 -----------KKTLFAGDS--------------------EIDQLFRIFRTLGTPHEDVW 290
+ LF G S DQL IF LGTP E+
Sbjct: 280 MIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDI 339
Query: 291 PGVSKLPI--YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+ K Y FP+ +E A+ + +++ +P +R++ L H +
Sbjct: 340 EALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPF 399
Query: 349 FNQVEMVK 356
F +V + +
Sbjct: 400 FKEVRIAE 407
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 13/200 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVT 228
Y+Y+LL+AL YCHS+ I+HRD+KP N++I+ L+L D+GL+ F P Y V +
Sbjct: 151 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVAS 209
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT-LFAGDSEIDQLFRIFRTLGTPHE 287
+++ PE+L+ + Y ++D+WS GC+F+ MI +K F G DQL +I + LGT
Sbjct: 210 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGL 269
Query: 288 DVW---------PGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRV 338
+ + P + L + P W ++ +L P A+D K++ D ++R+
Sbjct: 270 NAYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 328
Query: 339 SAKTILQHEYFNQVEMVKPT 358
+A + H YF QV + +
Sbjct: 329 TALEAMTHPYFQQVRAAENS 348
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 82/138 (59%), Gaps = 7/138 (5%)
Query: 34 PNVIRLHDVIPVDFKLF--LVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCH 91
PN+++L D++ L+FE++ DF P + + Y+Y+LL+AL YCH
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNN--TDFKVLYPTLTDYDI-RYYIYELLKALDYCH 163
Query: 92 SRRIIHRDLKPQNILINKS-GALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAK 150
S+ I+HRD+KP N++I+ L+L D+GL+ F P Y V + +++ PE+L+ +
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 222
Query: 151 VYSTTVDIWSAGCIFSEM 168
Y ++D+WS GC+F+ M
Sbjct: 223 DYDYSLDMWSLGCMFAGM 240
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 97/179 (54%), Gaps = 28/179 (15%)
Query: 22 LREISVLKELKHPNVIRLHD-VIPVDF----KLFLVFEFLRQDLKDFLQTTPVPVPPALA 76
LREI++L LK +IRL+D +IP D +L++V E DLK +T P+ +
Sbjct: 73 LREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKT-PIFLTEEHI 131
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI---------- 126
K+ LY LL + H IIHRDLKP N L+N+ ++K+ DFGL+R
Sbjct: 132 KTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDL 191
Query: 127 -------PMNR-----YTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQ 173
P N+ T VVT WYR PE++L + Y+ ++DIWS GCIF+E+ + Q
Sbjct: 192 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQ 250
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 103/238 (43%), Gaps = 52/238 (21%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI------------- 217
LY LL + H IIHRDLKP N L+N+ ++K+ DFGL+R
Sbjct: 135 LYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEEN 194
Query: 218 ----PMNR-----YTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMI-------- 260
P N+ T VVT WYR PE++L + Y+ ++DIWS GCIF+E++
Sbjct: 195 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIN 254
Query: 261 ---TKKTLFAGD-----------------SEIDQLFRIFRTLGTPHEDVWPGVSKLPI-- 298
+ LF G S DQL IF +GTP ED ++K +
Sbjct: 255 DPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIK 314
Query: 299 YKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQVEMVK 356
Y FP +P + +++ ++ +P +R++ L H Y V K
Sbjct: 315 YIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKK 372
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTT 67
+S+++ EGV REI + L+HPN++R+++ +++L+ EF R +L LQ
Sbjct: 50 KSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH 109
Query: 68 PVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP 127
+ +++ +L +AL YCH R++IHRD+KP+N+L+ G LK+ADFG S P
Sbjct: 110 GR-FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAP 166
Query: 128 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRYCHS-RRI 186
R TL Y PPE++ G K + VD+W AG + E ++ + + RRI
Sbjct: 167 SLRRRXMCGTLDYLPPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 225
Query: 187 IHRDLK 192
++ DLK
Sbjct: 226 VNVDLK 231
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+++ +L +AL YCH R++IHRD+KP+N+L+ G LK+ADFG S P R T
Sbjct: 119 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGT 176
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G K + VD+W AG + E + F S + RI D
Sbjct: 177 LDYLPPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV------D 229
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
+ K P + +D + D+ SK++ P QR+ K +++H
Sbjct: 230 L-----KFPPFLSDG------------------SKDLISKLLRYHPPQRLPLKGVMEH 264
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTT 67
+S+++ EGV REI + L+HPN++R+++ +++L+ EF R +L LQ
Sbjct: 49 KSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH 108
Query: 68 PVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP 127
+ +++ +L +AL YCH R++IHRD+KP+N+L+ G LK+ADFG S P
Sbjct: 109 GR-FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAP 165
Query: 128 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRYCHS-RRI 186
R TL Y PPE++ G K + VD+W AG + E ++ + + RRI
Sbjct: 166 SLRRRXMCGTLDYLPPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 224
Query: 187 IHRDLK 192
++ DLK
Sbjct: 225 VNVDLK 230
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+++ +L +AL YCH R++IHRD+KP+N+L+ G LK+ADFG S P R T
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGT 175
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G K + VD+W AG + E + F S + RI D
Sbjct: 176 LDYLPPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV------D 228
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
+ K P + +D + D+ SK++ P QR+ K +++H
Sbjct: 229 L-----KFPPFLSDG------------------SKDLISKLLRYHPPQRLPLKGVMEH 263
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTT 67
+S+++ EGV REI + L+HPN++R+++ +++L+ EF R +L LQ
Sbjct: 49 KSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH 108
Query: 68 PVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP 127
+ +++ +L +AL YCH R++IHRD+KP+N+L+ G LK+ADFG S P
Sbjct: 109 GR-FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAP 165
Query: 128 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRYCHS-RRI 186
R TL Y PPE++ G K + VD+W AG + E ++ + + RRI
Sbjct: 166 SLRRRXMCGTLDYLPPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 224
Query: 187 IHRDLK 192
++ DLK
Sbjct: 225 VNVDLK 230
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+++ +L +AL YCH R++IHRD+KP+N+L+ G LK+ADFG S P R T
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGT 175
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G K + VD+W AG + E + F S + RI D
Sbjct: 176 LDYLPPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV------D 228
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
+ K P + +D + D+ SK++ P QR+ K +++H
Sbjct: 229 L-----KFPPFLSDG------------------SKDLISKLLRYHPPQRLPLKGVMEH 263
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 93/161 (57%), Gaps = 5/161 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTT 67
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ R ++ LQ
Sbjct: 48 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL 107
Query: 68 PVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP 127
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P
Sbjct: 108 S-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAP 164
Query: 128 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+R T TL Y PPE++ G +++ VD+WS G + E
Sbjct: 165 SSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 204
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T T
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGT 174
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 175 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 229
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 230 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 262
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 99/189 (52%), Gaps = 19/189 (10%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 69 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 128
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 129 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 180
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRY 180
S P +R T TL Y PPE++ G +++ VD+WS G + E EA Y
Sbjct: 181 S--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 237
Query: 181 CHSRRIIHR 189
+ + I R
Sbjct: 238 QETYKRISR 246
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T T
Sbjct: 138 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGT 195
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 196 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 250
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 251 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 283
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 92/161 (57%), Gaps = 5/161 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTT 67
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ R ++ LQ
Sbjct: 48 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL 107
Query: 68 PVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP 127
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P
Sbjct: 108 S-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAP 164
Query: 128 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+R TL Y PPE++ G +++ VD+WS G + E
Sbjct: 165 SSRRXXLXGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 204
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGT 174
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 175 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 229
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 230 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 262
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 43 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 103 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 154
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R T TL Y PPE++ G +++ VD+WS G + E
Sbjct: 155 S--VHAPSSRRTELCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 199
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T T
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGT 169
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 170 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 224
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 225 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 60 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 119
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 120 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 171
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R T TL Y PPE++ G +++ VD+WS G + E
Sbjct: 172 S--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 216
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T T
Sbjct: 129 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGT 186
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 187 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 241
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 242 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 274
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 48 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 107
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 108 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 159
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R T TL Y PPE++ G +++ VD+WS G + E
Sbjct: 160 S--VHAPSSRRTDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 204
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T T
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGT 174
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 175 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 229
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 230 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 262
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 44 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 103
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 104 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 155
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R T TL Y PPE++ G +++ VD+WS G + E
Sbjct: 156 S--VHAPSSRRTDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 200
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T T
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGT 170
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 171 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 225
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 226 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 258
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 43 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 103 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 154
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R T TL Y PPE++ G +++ VD+WS G + E
Sbjct: 155 S--VHAPSSRRTDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 199
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T T
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGT 169
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 170 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 224
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 225 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 99/189 (52%), Gaps = 19/189 (10%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 47 KTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 106
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 107 SRFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGW 158
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRY 180
S P +R T TL Y PPE++ G +++ VD+WS G + E EA Y
Sbjct: 159 S--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGMPPFEAHTY 215
Query: 181 CHSRRIIHR 189
+ R I R
Sbjct: 216 QETYRRISR 224
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 89/178 (50%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T T
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGT 173
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + F + + RI R T
Sbjct: 174 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT---- 228
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ + QR++ +L+H
Sbjct: 229 --------------FPDFVTEG-----------ARDLISRLLKHNASQRLTLAEVLEH 261
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 43 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 103 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 154
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R T TL Y PPE++ G +++ VD+WS G + E
Sbjct: 155 S--VHAPSSRRTDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 199
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T T
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGT 169
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 170 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 224
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 225 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 48 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 107
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 108 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 159
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R T TL Y PPE++ G +++ VD+WS G + E
Sbjct: 160 S--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 204
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T T
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGT 174
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 175 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 229
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 230 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 262
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 46 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 106 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 157
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R T TL Y PPE++ G +++ VD+WS G + E
Sbjct: 158 S--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 202
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T T
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGT 172
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 173 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 227
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 228 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 43 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 103 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 154
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R T TL Y PPE++ G +++ VD+WS G + E
Sbjct: 155 S--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 199
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T T
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGT 169
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 170 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 224
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 225 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 43 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 103 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 154
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R T TL Y PPE++ G +++ VD+WS G + E
Sbjct: 155 S--VHAPSSRRTXLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 199
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T T
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGT 169
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 170 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 224
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 225 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 47 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 106
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 107 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 158
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R T TL Y PPE++ G +++ VD+WS G + E
Sbjct: 159 S--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 203
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T T
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGT 173
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 174 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 228
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 229 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 261
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 46 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 106 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 157
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R T TL Y PPE++ G +++ VD+WS G + E
Sbjct: 158 S--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 202
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T T
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGT 172
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 173 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 227
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 228 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 42 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 101
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 102 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 153
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R T TL Y PPE++ G +++ VD+WS G + E
Sbjct: 154 S--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 198
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T T
Sbjct: 111 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGT 168
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 169 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 223
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 224 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 256
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 40 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 99
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 100 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 151
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R T TL Y PPE++ G +++ VD+WS G + E
Sbjct: 152 S--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 196
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T T
Sbjct: 109 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGT 166
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 167 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 221
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 222 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 254
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 44 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 103
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 104 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 155
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R T TL Y PPE++ G +++ VD+WS G + E
Sbjct: 156 S--CHAPSSRRTTLSGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 200
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T T
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGT 170
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 171 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 225
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 226 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 258
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 98/189 (51%), Gaps = 19/189 (10%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 69 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 128
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 129 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 180
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRY 180
S P +R TL Y PPE++ G +++ VD+WS G + E EA Y
Sbjct: 181 S--VHAPSSRRDDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 237
Query: 181 CHSRRIIHR 189
+ + I R
Sbjct: 238 QETYKRISR 246
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T
Sbjct: 138 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGT 195
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 196 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 250
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 251 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 283
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 46 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 106 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 157
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R TL Y PPE++ G +++ VD+WS G + E
Sbjct: 158 S--VHAPSSRRAALCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 202
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGT 172
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 173 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 227
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 228 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 90/168 (53%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 48 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 107
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 108 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 159
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R T TL Y PPE + G + + VD+WS G + E
Sbjct: 160 S--VHAPSSRRTTLCGTLDYLPPEXIEG-RXHDEKVDLWSLGVLCYEF 204
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 89/178 (50%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T T
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGT 174
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE + G + + VD+WS G + E + K F ++ + RI R T
Sbjct: 175 LDYLPPEXIEG-RXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 229
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 230 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPXLREVLEH 262
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 45 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 104
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 105 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 156
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R TL Y PPE++ G +++ VD+WS G + E
Sbjct: 157 S--VHAPSSRRXXLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 201
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T
Sbjct: 114 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGT 171
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 172 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 226
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 227 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 259
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 84/146 (57%), Gaps = 2/146 (1%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQ 82
REIS L+ L+HP++I+L+DVI ++ +V E+ +L D++ + A+ + Q
Sbjct: 63 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQ 121
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
++ A+ YCH +I+HRDLKP+N+L+++ +K+ADFGLS T N + Y
Sbjct: 122 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAA 180
Query: 143 PEILLGAKVYSTTVDIWSAGCIFSEM 168
PE++ G VD+WS G I M
Sbjct: 181 PEVISGKLYAGPEVDVWSCGVILYVM 206
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 30/180 (16%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
+ Q++ A+ YCH +I+HRDLKP+N+L+++ +K+ADFGLS T N +
Sbjct: 118 FFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSP 176
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PE++ G VD+WS G I M+ ++ F D I LF+ ++
Sbjct: 177 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF-DDESIPVLFK----------NI 225
Query: 290 WPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYF 349
GV LP + + P A + +++ ++P R+S I+Q ++F
Sbjct: 226 SNGVYTLPKFLS------------------PGAAGLIKRMLIVNPLNRISIHEIMQDDWF 267
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 84/146 (57%), Gaps = 2/146 (1%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQ 82
REIS L+ L+HP++I+L+DVI ++ +V E+ +L D++ + A+ + Q
Sbjct: 62 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQ 120
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
++ A+ YCH +I+HRDLKP+N+L+++ +K+ADFGLS T N + Y
Sbjct: 121 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAA 179
Query: 143 PEILLGAKVYSTTVDIWSAGCIFSEM 168
PE++ G VD+WS G I M
Sbjct: 180 PEVISGKLYAGPEVDVWSCGVILYVM 205
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 30/180 (16%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
+ Q++ A+ YCH +I+HRDLKP+N+L+++ +K+ADFGLS T N +
Sbjct: 117 FFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSP 175
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PE++ G VD+WS G I M+ ++ F D I LF+ ++
Sbjct: 176 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF-DDESIPVLFK----------NI 224
Query: 290 WPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYF 349
GV LP + + P A + +++ ++P R+S I+Q ++F
Sbjct: 225 SNGVYTLPKFLS------------------PGAAGLIKRMLIVNPLNRISIHEIMQDDWF 266
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 45 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 104
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+A+FG
Sbjct: 105 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGW 156
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R T TL Y PPE++ G +++ VD+WS G + E
Sbjct: 157 S--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 201
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+A+FG S P +R T T
Sbjct: 114 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGT 171
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 172 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 226
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 227 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 259
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 19/189 (10%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 47 KTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 106
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 107 SRFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGW 158
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRY 180
S P +R TL Y PPE++ G +++ VD+WS G + E EA Y
Sbjct: 159 S--VHAPSSRRDTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGMPPFEAHTY 215
Query: 181 CHSRRIIHR 189
+ R I R
Sbjct: 216 QETYRRISR 224
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGT 173
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + F + + RI R T
Sbjct: 174 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT---- 228
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ + QR++ +L+H
Sbjct: 229 --------------FPDFVTEG-----------ARDLISRLLKHNASQRLTLAEVLEH 261
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 43 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 103 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 154
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R TL Y PPE++ G +++ VD+WS G + E
Sbjct: 155 S--VHAPSSRRAALCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 199
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGT 169
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 170 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 224
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 225 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 46 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+A+FG
Sbjct: 106 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGW 157
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R T TL Y PPE++ G +++ VD+WS G + E
Sbjct: 158 S--VHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 202
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+A+FG S P +R T T
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGT 172
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 173 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 227
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 228 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 46 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 106 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 157
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R TL Y PPE++ G +++ VD+WS G + E
Sbjct: 158 S--VHAPSSRRXXLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 202
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGT 172
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 173 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 227
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 228 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 44 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 103
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 104 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 155
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R TL Y PPE++ G +++ VD+WS G + E
Sbjct: 156 S--VHAPSSRRDTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 200
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGT 170
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 171 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 225
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 226 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 258
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 84/146 (57%), Gaps = 2/146 (1%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQ 82
REIS L+ L+HP++I+L+DVI ++ +V E+ +L D++ + A+ + Q
Sbjct: 57 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQ 115
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
++ A+ YCH +I+HRDLKP+N+L+++ +K+ADFGLS T N + Y
Sbjct: 116 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAA 174
Query: 143 PEILLGAKVYSTTVDIWSAGCIFSEM 168
PE++ G VD+WS G I M
Sbjct: 175 PEVISGKLYAGPEVDVWSCGVILYVM 200
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 30/180 (16%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
+ Q++ A+ YCH +I+HRDLKP+N+L+++ +K+ADFGLS T N +
Sbjct: 112 FFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSP 170
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PE++ G VD+WS G I M+ ++ F D I LF+ ++
Sbjct: 171 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF-DDESIPVLFK----------NI 219
Query: 290 WPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYF 349
GV LP + + P A + +++ ++P R+S I+Q ++F
Sbjct: 220 SNGVYTLPKFLS------------------PGAAGLIKRMLIVNPLNRISIHEIMQDDWF 261
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 84/146 (57%), Gaps = 2/146 (1%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQ 82
REIS L+ L+HP++I+L+DVI ++ +V E+ +L D++ + A+ + Q
Sbjct: 53 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQ 111
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
++ A+ YCH +I+HRDLKP+N+L+++ +K+ADFGLS T N + Y
Sbjct: 112 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAA 170
Query: 143 PEILLGAKVYSTTVDIWSAGCIFSEM 168
PE++ G VD+WS G I M
Sbjct: 171 PEVISGKLYAGPEVDVWSCGVILYVM 196
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 30/180 (16%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
+ Q++ A+ YCH +I+HRDLKP+N+L+++ +K+ADFGLS T N +
Sbjct: 108 FFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSP 166
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PE++ G VD+WS G I M+ ++ F D I LF+ ++
Sbjct: 167 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF-DDESIPVLFK----------NI 215
Query: 290 WPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYF 349
GV LP + + P A + +++ ++P R+S I+Q ++F
Sbjct: 216 SNGVYTLPKFLS------------------PGAAGLIKRMLIVNPLNRISIHEIMQDDWF 257
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 43 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 103 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 154
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R TL Y PPE++ G +++ VD+WS G + E
Sbjct: 155 S--VHAPSSRRXXLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 199
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGT 169
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 170 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 224
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 225 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 98/189 (51%), Gaps = 19/189 (10%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 46 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 106 SKFDEQRTA--------TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 157
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRY 180
S P +R TL Y PPE++ G +++ VD+WS G + E EA Y
Sbjct: 158 S--VHAPSSRRDDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
Query: 181 CHSRRIIHR 189
+ + I R
Sbjct: 215 QETYKRISR 223
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+R+IHRD+KP+N+L+ +G LK+ADFG S P +R T
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGT 172
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ + RI R T
Sbjct: 173 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 227
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 228 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 7/158 (4%)
Query: 19 STALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEF-----LRQDLKDFLQTTPVPVPP 73
+ ++EI +LK+L HPNVI+ + D +L +V E L + +K F + + +P
Sbjct: 77 ADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRL-IPE 135
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTH 133
Y QL AL + HSRR++HRD+KP N+ I +G +KL D GL R F+
Sbjct: 136 RTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS 195
Query: 134 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYL 171
V T +Y PE + Y+ DIWS GC+ EM+ L
Sbjct: 196 LVGTPYYMSPE-RIHENGYNFKSDIWSLGCLLYEMAAL 232
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y QL AL + HSRR++HRD+KP N+ I +G +KL D GL R F+ V T
Sbjct: 141 YFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTP 200
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGD 269
+Y PE + Y+ DIWS GC+ EM ++ F GD
Sbjct: 201 YYMSPE-RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 19/168 (11%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL--------RQDL 60
+++++ GV RE+ + L+HPN++RL+ +++L+ E+ Q L
Sbjct: 43 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKL 102
Query: 61 KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGL 120
F + +Y+ +L AL YCHS+++IHRD+KP+N+L+ +G LK+ADFG
Sbjct: 103 SKFDEQRTA--------TYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGW 154
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
S P +R TL Y PPE++ G +++ VD+WS G + E
Sbjct: 155 S--VHAPSSRRAALCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEF 199
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 32/178 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
+Y+ +L AL YCHS+++IHRD+KP+N+L+ +G LK+ADFG S P +R T
Sbjct: 112 TYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGT 169
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PPE++ G +++ VD+WS G + E + K F ++ D RI R T
Sbjct: 170 LDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFT---- 224
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
FP++ + A D+ S+++ +P QR + +L+H
Sbjct: 225 --------------FPDFVTEG-----------ARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 3/145 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
RE+ ++K L HPN+++L +VI + L+L+ E+ ++ D+L + A+S
Sbjct: 59 FREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL-VAHGRMKEKEARSKF 117
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ A++YCH +RI+HRDLK +N+L++ +K+ADFG S FT+ T + Y
Sbjct: 118 RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTF-CGSPPY 176
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIF 165
PE+ G K VD+WS G I
Sbjct: 177 AAPELFQGKKYDGPEVDVWSLGVIL 201
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
S Q++ A++YCH +RI+HRDLK +N+L++ +K+ADFG S FT+ T +
Sbjct: 115 SKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTF-CGS 173
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
Y PE+ G K VD+WS G I +++ F G + L E
Sbjct: 174 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-----------QNLKELRER 222
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIM 330
V G ++P Y + E K+F +LN P+ +IM
Sbjct: 223 VLRGKYRIPFYMSTDCENLLKRFL-VLN---PIKRGTLEQIM 260
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
RE+ ++K L HPN+++L +VI + L+L+ E+ ++ D+L + A+S
Sbjct: 62 FREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL-VAHGRMKEKEARSKF 120
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ A++YCH +RI+HRDLK +N+L++ +K+ADFG S FT+ + Y
Sbjct: 121 RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-GKLDAFCGAPPY 179
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIF 165
PE+ G K VD+WS G I
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVIL 204
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
S Q++ A++YCH +RI+HRDLK +N+L++ +K+ADFG S FT+ +
Sbjct: 118 SKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-GKLDAFCGA 176
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
Y PE+ G K VD+WS G I +++ F G + L E
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-----------QNLKELRER 225
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIM 330
V G ++P Y + E K+F +LN P+ +IM
Sbjct: 226 VLRGKYRIPFYMSTDCENLLKRFL-VLN---PIKRGTLEQIM 263
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 83/145 (57%), Gaps = 3/145 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
RE+ ++K L HPN+++L +VI + L+LV E+ ++ D+L + A++
Sbjct: 62 FREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKF 120
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ A++YCH + I+HRDLK +N+L++ +K+ADFG S FT+ N+ + Y
Sbjct: 121 RQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVG-NKLDTFCGSPPY 179
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIF 165
PE+ G K VD+WS G I
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVIL 204
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
Q++ A++YCH + I+HRDLK +N+L++ +K+ADFG S FT+ N+ + Y
Sbjct: 122 QIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVG-NKLDTFCGSPPYA 180
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
PE+ G K VD+WS G I +++ F G + + R+ R
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 228
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 2/146 (1%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQ 82
REIS LK L+HP++I+L+DVI + +V E+ +L D++ + + + Q
Sbjct: 58 REISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYI-VEKKRMTEDEGRRFFQQ 116
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
++ A+ YCH +I+HRDLKP+N+L++ + +K+ADFGLS T N + Y
Sbjct: 117 IICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAA 175
Query: 143 PEILLGAKVYSTTVDIWSAGCIFSEM 168
PE++ G VD+WS G + M
Sbjct: 176 PEVINGKLYAGPEVDVWSCGIVLYVM 201
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 36/184 (19%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
+ Q++ A+ YCH +I+HRDLKP+N+L++ + +K+ADFGLS T N +
Sbjct: 113 FFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTSCGSP 171
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PE++ G VD+WS G + M+
Sbjct: 172 NYAAPEVINGKLYAGPEVDVWSCGIVLYVML----------------------------- 202
Query: 290 WPGVSKLPIYKTDFPEWRPKKFSEILNLPD---PLAVDVFSKIMALDPKQRVSAKTILQH 346
V +LP P K S + +PD P A + +++ DP QR++ + I +
Sbjct: 203 ---VGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259
Query: 347 EYFN 350
+FN
Sbjct: 260 PWFN 263
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
RE+ ++K L HPN+++L +VI + L+LV E+ ++ D+L + A++
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKF 119
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ A++YCH + I+HRDLK +N+L++ +K+ADFG S FT N+ + Y
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDEFCGSPPY 178
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIF 165
PE+ G K VD+WS G I
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVIL 203
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 33/195 (16%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
Q++ A++YCH + I+HRDLK +N+L++ +K+ADFG S FT N+ + Y
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDEFCGSPPYA 179
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPG 292
PE+ G K VD+WS G I +++ F G + L E V G
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-----------QNLKELRERVLRG 228
Query: 293 VSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFN-- 350
++P Y + E KKF + L+P +R + + I++ + N
Sbjct: 229 KYRIPFYMSTDCENLLKKF------------------LILNPSKRGTLEQIMKDRWMNVG 270
Query: 351 -QVEMVKPTLAVFPE 364
+ + +KP + P+
Sbjct: 271 HEDDELKPYVEPLPD 285
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
RE+ ++K L HPN+++L +VI + L+LV E+ ++ D+L + A++
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKF 119
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ A++YCH + I+HRDLK +N+L++ +K+ADFG S FT N+ + Y
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDTFCGSPPY 178
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIF 165
PE+ G K VD+WS G I
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVIL 203
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 33/195 (16%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
Q++ A++YCH + I+HRDLK +N+L++ +K+ADFG S FT N+ + Y
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDTFCGSPPYA 179
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPG 292
PE+ G K VD+WS G I +++ F G + L E V G
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-----------QNLKELRERVLRG 228
Query: 293 VSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFN-- 350
++P Y + E KKF + L+P +R + + I++ + N
Sbjct: 229 KYRIPFYMSTDCENLLKKF------------------LILNPSKRGTLEQIMKDRWMNVG 270
Query: 351 -QVEMVKPTLAVFPE 364
+ + +KP + P+
Sbjct: 271 HEDDELKPYVEPLPD 285
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
RE+ ++K L HPN+++L +VI + L+LV E+ ++ D+L + A++
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKF 119
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ A++YCH + I+HRDLK +N+L++ +K+ADFG S FT N+ + Y
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDTFCGSPPY 178
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIF 165
PE+ G K VD+WS G I
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVIL 203
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 33/195 (16%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
Q++ A++YCH + I+HRDLK +N+L++ +K+ADFG S FT N+ + Y
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDTFCGSPPYA 179
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPG 292
PE+ G K VD+WS G I +++ F G + L E V G
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-----------QNLKELRERVLRG 228
Query: 293 VSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFN-- 350
++P Y + E KKF + L+P +R + + I++ + N
Sbjct: 229 KYRIPFYMSTDCENLLKKF------------------LILNPSKRGTLEQIMKDRWMNVG 270
Query: 351 -QVEMVKPTLAVFPE 364
+ + +KP + P+
Sbjct: 271 HEDDELKPYVEPLPD 285
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
RE+ ++K L HPN+++L +VI + L+LV E+ ++ D+L + A++
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKF 119
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ A++YCH + I+HRDLK +N+L++ +K+ADFG S FT N+ + Y
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDTFCGSPPY 178
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIF 165
PE+ G K VD+WS G I
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVIL 203
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 33/195 (16%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
Q++ A++YCH + I+HRDLK +N+L++ +K+ADFG S FT N+ + Y
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDTFCGSPPYA 179
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPG 292
PE+ G K VD+WS G I +++ F G + L E V G
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-----------QNLKELRERVLRG 228
Query: 293 VSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFN-- 350
++P Y + E KKF + L+P +R + + I++ + N
Sbjct: 229 KYRIPFYMSTDCENLLKKF------------------LILNPSKRGTLEQIMKDRWMNVG 270
Query: 351 -QVEMVKPTLAVFPE 364
+ + +KP +A P+
Sbjct: 271 HEDDELKPYVAPLPD 285
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
RE+ ++K L HPN+++L +VI + L+LV E+ ++ D+L + A++
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKF 119
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ A++YCH + I+HRDLK +N+L++ +K+ADFG S FT N+ Y
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDAFCGAPPY 178
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIF 165
PE+ G K VD+WS G I
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVIL 203
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 33/195 (16%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
Q++ A++YCH + I+HRDLK +N+L++ +K+ADFG S FT N+ Y
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDAFCGAPPYA 179
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPG 292
PE+ G K VD+WS G I +++ F G + L E V G
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-----------QNLKELRERVLRG 228
Query: 293 VSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFN-- 350
++P Y + E KKF + L+P +R + + I++ + N
Sbjct: 229 KYRIPFYMSTDCENLLKKF------------------LILNPSKRGTLEQIMKDRWMNVG 270
Query: 351 -QVEMVKPTLAVFPE 364
+ + +KP + P+
Sbjct: 271 HEDDELKPYVEPLPD 285
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
RE+ ++K L HPN+++L +VI + L+LV E+ ++ D+L + A++
Sbjct: 54 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGWMKEKEARAKF 112
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ A++YCH + I+HRDLK +N+L++ +K+ADFG S FT N+ + Y
Sbjct: 113 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDTFCGSPPY 171
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIF 165
PE+ G K VD+WS G I
Sbjct: 172 AAPELFQGKKYDGPEVDVWSLGVIL 196
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 33/195 (16%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
Q++ A++YCH + I+HRDLK +N+L++ +K+ADFG S FT N+ + Y
Sbjct: 114 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDTFCGSPPYA 172
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPG 292
PE+ G K VD+WS G I +++ F G + L E V G
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-----------QNLKELRERVLRG 221
Query: 293 VSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFN-- 350
++P Y + E KKF + L+P +R + + I++ + N
Sbjct: 222 KYRIPFYMSTDCENLLKKF------------------LILNPSKRGTLEQIMKDRWMNVG 263
Query: 351 -QVEMVKPTLAVFPE 364
+ + +KP + P+
Sbjct: 264 HEDDELKPYVEPLPD 278
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
RE+ + K L HPN+++L +VI + L+LV E+ ++ D+L A++
Sbjct: 61 FREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYL-VAHGRXKEKEARAKF 119
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ A++YCH + I+HRDLK +N+L++ +K+ADFG S FT N+ Y
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFG-NKLDAFCGAPPY 178
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIF 165
PE+ G K VD+WS G I
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVIL 203
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
Q++ A++YCH + I+HRDLK +N+L++ +K+ADFG S FT N+ Y
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFG-NKLDAFCGAPPYA 179
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPG 292
PE+ G K VD+WS G I +++ F G + L E V G
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-----------QNLKELRERVLRG 228
Query: 293 VSKLPIYKTDFPEWRPKKF 311
++P Y + E KKF
Sbjct: 229 KYRIPFYXSTDCENLLKKF 247
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 3/157 (1%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD--LKDFLQTTPVPVPPALAKSYL 80
RE++VL +KHPN+++ + + L++V ++ K V +
Sbjct: 72 REVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF 131
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q+ AL++ H R+I+HRD+K QNI + K G ++L DFG++R + + T +Y
Sbjct: 132 VQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYY 191
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEA 177
PEI K Y+ DIW+ GC+ E+ L EA
Sbjct: 192 LSPEICEN-KPYNNKSDIWALGCVLYELCTLKHAFEA 227
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 4/120 (3%)
Query: 162 GCIFSE---MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP 218
G +F E + + Q+ AL++ H R+I+HRD+K QNI + K G ++L DFG++R
Sbjct: 119 GVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178
Query: 219 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
+ + T +Y PEI K Y+ DIW+ GC+ E+ T K F S + + +I
Sbjct: 179 VELARACIGTPYYLSPEICEN-KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI 237
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 89/155 (57%), Gaps = 5/155 (3%)
Query: 12 VQVEGVPSTALREISVLKELKHPNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPV 69
+Q G +EI++LK+L HPNV++L +V+ P + L++VFE + Q + T
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK- 132
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN 129
P+ A+ Y L++ + Y H ++IIHRD+KP N+L+ + G +K+ADFG+S F
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 130 RYTHEVVTLWYRPPEILLGA-KVYST-TVDIWSAG 162
++ V T + PE L K++S +D+W+ G
Sbjct: 193 LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMG 227
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y L++ + Y H ++IIHRD+KP N+L+ + G +K+ADFG+S F ++ V T
Sbjct: 142 YFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTP 201
Query: 230 WYRPPEILLGA-KVYST-TVDIWSAG 253
+ PE L K++S +D+W+ G
Sbjct: 202 AFMAPESLSETRKIFSGKALDVWAMG 227
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 86/149 (57%), Gaps = 6/149 (4%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQT-TPVPVPPALAKSYL 80
RE+ +L H N++ + DV D +LV E++ L +++++ P+ V A+ ++
Sbjct: 60 REVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAI--NFT 117
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNRYTHEVVTLW 139
Q+L+ +++ H RI+HRD+KPQNILI+ + LK+ DFG+++A + + + H + T+
Sbjct: 118 NQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQ 177
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PE G T DI+S G + EM
Sbjct: 178 YFSPEQAKGEATDECT-DIYSIGIVLYEM 205
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 163 CIFSEMSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNR 221
+ + +++ Q+L+ +++ H RI+HRD+KPQNILI+ + LK+ DFG+++A + + +
Sbjct: 109 SVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ 168
Query: 222 YTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
H + T+ Y PE G T DI+S G + EM+ + F G++ +
Sbjct: 169 TNHVLGTVQYFSPEQAKGEATDECT-DIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 103/186 (55%), Gaps = 6/186 (3%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTT 67
+S+++ EGV REI + L HPN++RL++ +++L+ E+ R +L LQ +
Sbjct: 58 KSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS 117
Query: 68 PVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP 127
+ + +L +AL YCH +++IHRD+KP+N+L+ G LK+ADFG S P
Sbjct: 118 -CTFDEQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS--VHAP 174
Query: 128 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRYCHS-RRI 186
R TL Y PPE++ G ++++ VD+W G + E+ E+ + + RRI
Sbjct: 175 SLRRKTMCGTLDYLPPEMIEG-RMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRI 233
Query: 187 IHRDLK 192
+ DLK
Sbjct: 234 VKVDLK 239
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 6/122 (4%)
Query: 163 CIFSEM---SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPM 219
C F E + + +L +AL YCH +++IHRD+KP+N+L+ G LK+ADFG S P
Sbjct: 118 CTFDEQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS--VHAPS 175
Query: 220 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIF 279
R TL Y PPE++ G ++++ VD+W G + E++ F S + RI
Sbjct: 176 LRRKTMCGTLDYLPPEMIEG-RMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 234
Query: 280 RT 281
+
Sbjct: 235 KV 236
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 43/249 (17%)
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEM------------SYLYQLLEALRYCHSRRIIHRDL 191
EIL + + ++++ G +F E+ + Q+ + Y H I+HRDL
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 192 KPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVD 248
KP+NIL+ K +K+ DFGLS F + + T +Y PE+L G Y D
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRIGTAYYIAPEVLRG--TYDEKCD 204
Query: 249 IWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRP 308
+WSAG I +++ F G +E D L R+ + Y D P+WR
Sbjct: 205 VWSAGVILYILLSGTPPFYGKNEYDILKRV----------------ETGKYAFDLPQWRT 248
Query: 309 KKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQVEMVKPTLAVFPELGYG 368
+ D A D+ K++ P R++A L+H + + PT++ P L
Sbjct: 249 --------ISDD-AKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESA 299
Query: 369 GNGCKDFKP 377
+ F+
Sbjct: 300 MTNIRQFQA 308
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 19 STALREISVLKELKHPNVIRLHDVIPVDFKLFLVFE-FLRQDLKDFLQTTPVPVPPALAK 77
ST LRE+ +LK+L HPN+++L +++ ++V E + +L D + A
Sbjct: 66 STILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-IKRKRFSEHDAA 124
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHE 134
+ Q+ + Y H I+HRDLKP+NIL+ K +K+ DFGLS F +
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDR 183
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
+ T +Y PE+L G Y D+WSAG I
Sbjct: 184 IGTAYYIAPEVLRG--TYDEKCDVWSAGVIL 212
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 6/122 (4%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSG--ALKLADFGLSRAFTIPMNRYTHEVV 227
+ + +L+ L H RIIH DLKP+NIL+ + G +K+ DFG S R +
Sbjct: 205 FAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYXXIQ 261
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
+ +YR PE++LGA+ Y +D+WS GCI +E++T L G+ E DQL + LG P +
Sbjct: 262 SRFYRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQ 320
Query: 288 DV 289
+
Sbjct: 321 KL 322
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 21/168 (12%)
Query: 21 ALREISVLKELKHP------NVIRLHDVIPVDFKLFLVFEFLRQDL-----KDFLQTTPV 69
A EI +L+ L+ NVI + + + + FE L +L K+ Q +
Sbjct: 140 AAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSL 199
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSG--ALKLADFGLSRAFTIP 127
P L + + + +L+ L H RIIH DLKP+NIL+ + G +K+ DFG S
Sbjct: 200 P----LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYE 252
Query: 128 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL 175
R + + +YR PE++LGA+ Y +D+WS GCI +E+ Y LL
Sbjct: 253 HQRVYXXIQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLL 299
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 84/147 (57%), Gaps = 8/147 (5%)
Query: 23 REISVLKELKHPNVIRLHDVIPVD--FKLFLVFEFLRQDLKDFLQTTPVP-VPPALAKSY 79
+EI +L+ L+H NVI+L DV+ + K+++V E+ +++ L + P P A Y
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGY 114
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRA---FTIPMNRYTHEVV 136
QL++ L Y HS+ I+H+D+KP N+L+ G LK++ G++ A F T +
Sbjct: 115 FCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ-G 173
Query: 137 TLWYRPPEILLGAKVYST-TVDIWSAG 162
+ ++PPEI G +S VDIWSAG
Sbjct: 174 SPAFQPPEIANGLDTFSGFKVDIWSAG 200
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 34/187 (18%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRA---FTIPMNRYTHE 225
Y QL++ L Y HS+ I+H+D+KP N+L+ G LK++ G++ A F T +
Sbjct: 113 GYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ 172
Query: 226 VVTLWYRPPEILLGAKVYST-TVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGT 284
+ ++PPEI G +S VDIWSAG + T F GD+ ++++F +G
Sbjct: 173 -GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN----IYKLFENIGK 227
Query: 285 PHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
+ PG P+ D+ ++ +P +R S + I
Sbjct: 228 GSYAI-PGDCGPPL------------------------SDLLKGMLEYEPAKRFSIRQIR 262
Query: 345 QHEYFNQ 351
QH +F +
Sbjct: 263 QHSWFRK 269
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 6/122 (4%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSG--ALKLADFGLSRAFTIPMNRYTHEVV 227
+ + +L+ L H RIIH DLKP+NIL+ + G +K+ DFG S R +
Sbjct: 205 FAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQ 261
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
+ +YR PE++LGA+ Y +D+WS GCI +E++T L G+ E DQL + LG P +
Sbjct: 262 SRFYRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ 320
Query: 288 DV 289
+
Sbjct: 321 KL 322
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 21/168 (12%)
Query: 21 ALREISVLKELKHP------NVIRLHDVIPVDFKLFLVFEFLRQDL-----KDFLQTTPV 69
A EI +L+ L+ NVI + + + + FE L +L K+ Q +
Sbjct: 140 AAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSL 199
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSG--ALKLADFGLSRAFTIP 127
P L + + + +L+ L H RIIH DLKP+NIL+ + G +K+ DFG S
Sbjct: 200 P----LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYE 252
Query: 128 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL 175
R + + +YR PE++LGA+ Y +D+WS GCI +E+ Y LL
Sbjct: 253 HQRVYTXIQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLL 299
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 6/122 (4%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSG--ALKLADFGLSRAFTIPMNRYTHEVV 227
+ + +L+ L H RIIH DLKP+NIL+ + G +K+ DFG S R +
Sbjct: 205 FAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQ 261
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
+ +YR PE++LGA+ Y +D+WS GCI +E++T L G+ E DQL + LG P +
Sbjct: 262 SRFYRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ 320
Query: 288 DV 289
+
Sbjct: 321 KL 322
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 21/168 (12%)
Query: 21 ALREISVLKELKHP------NVIRLHDVIPVDFKLFLVFEFLRQDL-----KDFLQTTPV 69
A EI +L+ L+ NVI + + + + FE L +L K+ Q +
Sbjct: 140 AAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSL 199
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSG--ALKLADFGLSRAFTIP 127
P L + + + +L+ L H RIIH DLKP+NIL+ + G +K+ DFG S
Sbjct: 200 P----LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYE 252
Query: 128 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL 175
R + + +YR PE++LGA+ Y +D+WS GCI +E+ Y LL
Sbjct: 253 HQRVYTXIQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLL 299
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFL------QTTPVPVPPALA 76
RE S+ LKHP+++ L + D L++VFEF+ D D A+A
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGMLYMVFEFM--DGADLCFEIVKRADAGFVYSEAVA 132
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTH 133
Y+ Q+LEALRYCH IIHRD+KP+N+L+ S +KL DFG++
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGG 192
Query: 134 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
V T + PE+ + + Y VD+W G I
Sbjct: 193 RVGTPHFMAPEV-VKREPYGKPVDVWGCGVIL 223
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 132 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM---SYLYQLLEALRYCHSRRIIH 188
T+ + Y E + GA + V AG ++SE Y+ Q+LEALRYCH IIH
Sbjct: 94 TYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIH 153
Query: 189 RDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYST 245
RD+KP+N+L+ S +KL DFG++ V T + PE+ + + Y
Sbjct: 154 RDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEV-VKREPYGK 212
Query: 246 TVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPE 305
VD+W G I +++ F G E R+F E + G K+
Sbjct: 213 PVDVWGCGVILFILLSGCLPFYGTKE-----RLF-------EGIIKGKYKM--------- 251
Query: 306 WRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQ 351
P+++S I A D+ +++ LDP +R++ L H + +
Sbjct: 252 -NPRQWSHI----SESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 85/154 (55%), Gaps = 21/154 (13%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEF-----LRQDL--KDFLQTTPVPVPPAL 75
RE + ++L+HPN++RLHD I + +LVF+ L +D+ ++F A
Sbjct: 77 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS-------EAD 129
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYT 132
A + Q+LE++ YCHS I+HR+LKP+N+L+ K A+KLADFGL A + +
Sbjct: 130 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAW 187
Query: 133 HEVV-TLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
H T Y PE+ L YS VDIW+ G I
Sbjct: 188 HGFAGTPGYLSPEV-LKKDPYSKPVDIWACGVIL 220
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 32/179 (17%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Q+LE++ YCHS I+HR+LKP+N+L+ K A+KLADFGL A + + H
Sbjct: 134 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAWHGFA 191
Query: 228 -TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T Y PE+ L YS VDIW+ G I ++ F + + R++ +
Sbjct: 192 GTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ----HRLYAQI---- 242
Query: 287 EDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
K Y PEW + P A + ++ ++PK+R++A L+
Sbjct: 243 --------KAGAYDYPSPEW---------DTVTPEAKSLIDSMLTVNPKKRITADQALK 284
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 89/176 (50%), Gaps = 9/176 (5%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-D 59
KV+ + R +++ V REI LK +HP++I+L+ VI F+V E++ +
Sbjct: 38 KVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGE 97
Query: 60 LKDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFG 119
L D++ V A+ Q+L A+ YCH ++HRDLKP+N+L++ K+ADFG
Sbjct: 98 LFDYI-CKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG 156
Query: 120 LSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL 175
LS + T + Y PE++ G VDIWS G I LY LL
Sbjct: 157 LSNMMSDGEFLRT-SCGSPNYAAPEVISGRLYAGPEVDIWSCGVI------LYALL 205
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 48/230 (20%)
Query: 140 YRPPEILLGAKVYSTTVDIW------SAGCIFS---------EMS---YLYQLLEALRYC 181
+R P I+ +V ST D + S G +F EM Q+L A+ YC
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYC 127
Query: 182 HSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAK 241
H ++HRDLKP+N+L++ K+ADFGLS + T + Y PE++ G
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT-SCGSPNYAAPEVISGRL 186
Query: 242 VYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKT 301
VDIWS G I ++ TL D + LF+ R GV +
Sbjct: 187 YAGPEVDIWSCGVILYALLC-GTLPFDDEHVPTLFKKIRG----------GVFYI----- 230
Query: 302 DFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQ 351
PE+ + + +L ++ +DP +R + K I +HE+F Q
Sbjct: 231 --PEYLNRSVATLL-----------MHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-D 59
KV+ + R +++ V REI LK +HP++I+L+ VI F+V E++ +
Sbjct: 38 KVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGE 97
Query: 60 LKDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFG 119
L D++ V A+ Q+L A+ YCH ++HRDLKP+N+L++ K+ADFG
Sbjct: 98 LFDYI-CKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG 156
Query: 120 LSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL 175
LS + + Y PE++ G VDIWS G I LY LL
Sbjct: 157 LSNMMS-DGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVI------LYALL 205
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 48/230 (20%)
Query: 140 YRPPEILLGAKVYSTTVDIW------SAGCIFS---------EMS---YLYQLLEALRYC 181
+R P I+ +V ST D + S G +F EM Q+L A+ YC
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYC 127
Query: 182 HSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAK 241
H ++HRDLKP+N+L++ K+ADFGLS + + Y PE++ G
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRDSCGSPNYAAPEVISGRL 186
Query: 242 VYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKT 301
VDIWS G I ++ TL D + LF+ R GV +
Sbjct: 187 YAGPEVDIWSCGVILYALLC-GTLPFDDEHVPTLFKKIRG----------GVFYI----- 230
Query: 302 DFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQ 351
PE+ + + +L ++ +DP +R + K I +HE+F Q
Sbjct: 231 --PEYLNRSVATLL-----------MHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 85/154 (55%), Gaps = 21/154 (13%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEF-----LRQDL--KDFLQTTPVPVPPAL 75
RE + ++L+HPN++RLHD I + +LVF+ L +D+ ++F A
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE-------AD 106
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYT 132
A + Q+LE++ YCHS I+HR+LKP+N+L+ K A+KLADFGL A + +
Sbjct: 107 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAW 164
Query: 133 HEVV-TLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
H T Y PE+ L YS VDIW+ G I
Sbjct: 165 HGFAGTPGYLSPEV-LKKDPYSKPVDIWACGVIL 197
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 32/179 (17%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Q+LE++ YCHS I+HR+LKP+N+L+ K A+KLADFGL A + + H
Sbjct: 111 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAWHGFA 168
Query: 228 -TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T Y PE+ L YS VDIW+ G I ++ F + + R++ +
Sbjct: 169 GTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ----HRLYAQI---- 219
Query: 287 EDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
K Y PEW + P A + ++ ++PK+R++A L+
Sbjct: 220 --------KAGAYDYPSPEW---------DTVTPEAKSLIDSMLTVNPKKRITADQALK 261
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 85/154 (55%), Gaps = 21/154 (13%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEF-----LRQDL--KDFLQTTPVPVPPAL 75
RE + ++L+HPN++RLHD I + +LVF+ L +D+ ++F A
Sbjct: 53 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE-------AD 105
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYT 132
A + Q+LE++ YCHS I+HR+LKP+N+L+ K A+KLADFGL A + +
Sbjct: 106 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAW 163
Query: 133 HEVV-TLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
H T Y PE+ L YS VDIW+ G I
Sbjct: 164 HGFAGTPGYLSPEV-LKKDPYSKPVDIWACGVIL 196
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 32/179 (17%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Q+LE++ YCHS I+HR+LKP+N+L+ K A+KLADFGL A + + H
Sbjct: 110 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAWHGFA 167
Query: 228 -TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T Y PE+ L YS VDIW+ G I ++ F + + R++ +
Sbjct: 168 GTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ----HRLYAQI---- 218
Query: 287 EDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
K Y PEW + P A + ++ ++PK+R++A L+
Sbjct: 219 --------KAGAYDYPSPEW---------DTVTPEAKSLIDSMLTVNPKKRITADQALK 260
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 85/154 (55%), Gaps = 21/154 (13%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEF-----LRQDL--KDFLQTTPVPVPPAL 75
RE + ++L+HPN++RLHD I + +LVF+ L +D+ ++F A
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE-------AD 106
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYT 132
A + Q+LE++ YCHS I+HR+LKP+N+L+ K A+KLADFGL A + +
Sbjct: 107 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAW 164
Query: 133 HEVV-TLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
H T Y PE+ L YS VDIW+ G I
Sbjct: 165 HGFAGTPGYLSPEV-LKKDPYSKPVDIWACGVIL 197
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 32/179 (17%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Q+LE++ YCHS I+HR+LKP+N+L+ K A+KLADFGL A + + H
Sbjct: 111 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAWHGFA 168
Query: 228 -TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPH 286
T Y PE+ L YS VDIW+ G I ++ F + + R++ +
Sbjct: 169 GTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ----HRLYAQI---- 219
Query: 287 EDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
K Y PEW + P A + ++ ++PK+R++A L+
Sbjct: 220 --------KAGAYDYPSPEW---------DTVTPEAKSLIDSMLTVNPKKRITADQALK 261
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 30/202 (14%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
+ L+AL + HS ++IHRD+K NIL+ G++KL DFG T ++ + V T ++
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWM 183
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPG 292
PE++ K Y VDIWS G + EMI + + ++ + L+ + T GTP
Sbjct: 184 APEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQ---- 237
Query: 293 VSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQV 352
P+K S I D ++ + +D ++R SAK +LQH++
Sbjct: 238 --------------NPEKLSAIFR-------DFLNRCLDMDVEKRGSAKELLQHQFL--- 273
Query: 353 EMVKPTLAVFPELGYGGNGCKD 374
++ KP ++ P + K+
Sbjct: 274 KIAKPLSSLTPLIAAAKEATKN 295
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
+ EI V++E K+PN++ D V +L++V E+L L D + T + +
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVC 122
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
+ L+AL + HS ++IHRD+K NIL+ G++KL DFG T ++ + V T ++
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYW 182
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEM 168
PE++ K Y VDIWS G + EM
Sbjct: 183 MAPEVVT-RKAYGPKVDIWSLGIMAIEM 209
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 41/204 (20%)
Query: 186 IIHRDLKPQNILIN--KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVY 243
IIH DLKP+NIL+ K A+K+ DFG S R + + +YR PE+LLG Y
Sbjct: 161 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG---QRIYQXIQSRFYRSPEVLLGMP-Y 216
Query: 244 STTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP--------------HEDV 289
+D+WS GCI EM T + LF+G +E+DQ+ +I LG P E +
Sbjct: 217 DLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKL 276
Query: 290 WPGVSKLPIYKTDFPEWRP---KKFSEILN-----------------LPDPLAV-DVFSK 328
G L K E++P +K IL + D L D+ +
Sbjct: 277 PDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILR 336
Query: 329 IMALDPKQRVSAKTILQHEYFNQV 352
++ DPK R+ LQH +F +
Sbjct: 337 MLDYDPKTRIQPYYALQHSFFKKT 360
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 66/125 (52%), Gaps = 9/125 (7%)
Query: 49 LFLVFEFLRQDLKDFLQTTPV-PVPPALAKSYLYQLLEALRYCHS--RRIIHRDLKPQNI 105
L LVFE L +L D L+ T V L + + Q+ AL + + IIH DLKP+NI
Sbjct: 112 LCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENI 171
Query: 106 LIN--KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGC 163
L+ K A+K+ DFG S R + + +YR PE+LLG Y +D+WS GC
Sbjct: 172 LLCNPKRSAIKIVDFGSSCQLG---QRIYQXIQSRFYRSPEVLLGMP-YDLAIDMWSLGC 227
Query: 164 IFSEM 168
I EM
Sbjct: 228 ILVEM 232
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 41/204 (20%)
Query: 186 IIHRDLKPQNILIN--KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVY 243
IIH DLKP+NIL+ K A+K+ DFG S R + + +YR PE+LLG Y
Sbjct: 180 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG---QRIYQXIQSRFYRSPEVLLGMP-Y 235
Query: 244 STTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP--------------HEDV 289
+D+WS GCI EM T + LF+G +E+DQ+ +I LG P E +
Sbjct: 236 DLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKL 295
Query: 290 WPGVSKLPIYKTDFPEWRP---KKFSEILN-----------------LPDPLAV-DVFSK 328
G L K E++P +K IL + D L D+ +
Sbjct: 296 PDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILR 355
Query: 329 IMALDPKQRVSAKTILQHEYFNQV 352
++ DPK R+ LQH +F +
Sbjct: 356 MLDYDPKTRIQPYYALQHSFFKKT 379
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 66/125 (52%), Gaps = 9/125 (7%)
Query: 49 LFLVFEFLRQDLKDFLQTTPV-PVPPALAKSYLYQLLEALRYCHS--RRIIHRDLKPQNI 105
L LVFE L +L D L+ T V L + + Q+ AL + + IIH DLKP+NI
Sbjct: 131 LCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENI 190
Query: 106 LIN--KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGC 163
L+ K A+K+ DFG S R + + +YR PE+LLG Y +D+WS GC
Sbjct: 191 LLCNPKRSAIKIVDFGSSCQLG---QRIYQXIQSRFYRSPEVLLGMP-YDLAIDMWSLGC 246
Query: 164 IFSEM 168
I EM
Sbjct: 247 ILVEM 251
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 30/202 (14%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
+ L+AL + HS ++IHRD+K NIL+ G++KL DFG T ++ + V T ++
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWM 183
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPG 292
PE++ K Y VDIWS G + EMI + + ++ + L+ + T GTP
Sbjct: 184 APEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQ---- 237
Query: 293 VSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQV 352
P+K S I D ++ + +D ++R SAK +LQH++
Sbjct: 238 --------------NPEKLSAIFR-------DFLNRCLEMDVEKRGSAKELLQHQFL--- 273
Query: 353 EMVKPTLAVFPELGYGGNGCKD 374
++ KP ++ P + K+
Sbjct: 274 KIAKPLSSLTPLIAAAKEATKN 295
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
+ EI V++E K+PN++ D V +L++V E+L L D + T + +
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVC 122
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
+ L+AL + HS ++IHRD+K NIL+ G++KL DFG T ++ + V T ++
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYW 182
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEM 168
PE++ K Y VDIWS G + EM
Sbjct: 183 MAPEVVT-RKAYGPKVDIWSLGIMAIEM 209
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 41/204 (20%)
Query: 186 IIHRDLKPQNILIN--KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVY 243
IIH DLKP+NIL+ K A+K+ DFG S R + + +YR PE+LLG Y
Sbjct: 180 IIHCDLKPENILLCNPKRXAIKIVDFGSSCQLG---QRIYQXIQSRFYRSPEVLLGMP-Y 235
Query: 244 STTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP--------------HEDV 289
+D+WS GCI EM T + LF+G +E+DQ+ +I LG P E +
Sbjct: 236 DLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKL 295
Query: 290 WPGVSKLPIYKTDFPEWRP---KKFSEILN-----------------LPDPLAV-DVFSK 328
G L K E++P +K IL + D L D+ +
Sbjct: 296 PDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILR 355
Query: 329 IMALDPKQRVSAKTILQHEYFNQV 352
++ DPK R+ LQH +F +
Sbjct: 356 MLDYDPKTRIQPYYALQHSFFKKT 379
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 66/125 (52%), Gaps = 9/125 (7%)
Query: 49 LFLVFEFLRQDLKDFLQTTPV-PVPPALAKSYLYQLLEALRYCHS--RRIIHRDLKPQNI 105
L LVFE L +L D L+ T V L + + Q+ AL + + IIH DLKP+NI
Sbjct: 131 LCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENI 190
Query: 106 LIN--KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGC 163
L+ K A+K+ DFG S R + + +YR PE+LLG Y +D+WS GC
Sbjct: 191 LLCNPKRXAIKIVDFGSSCQLG---QRIYQXIQSRFYRSPEVLLGMP-YDLAIDMWSLGC 246
Query: 164 IFSEM 168
I EM
Sbjct: 247 ILVEM 251
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 86/160 (53%), Gaps = 9/160 (5%)
Query: 13 QVEGVPSTALREISVLKELK-HPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVP 70
Q+E V RE +L+++ HP++I L D +FLVF+ +R+ +L D+L T V
Sbjct: 138 QLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVA 196
Query: 71 VPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR 130
+ +S + LLEA+ + H+ I+HRDLKP+NIL++ + ++L+DFG S P +
Sbjct: 197 LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS-CHLEPGEK 255
Query: 131 YTHEVVTLWYRPPEILLGAK-----VYSTTVDIWSAGCIF 165
T Y PEIL + Y VD+W+ G I
Sbjct: 256 LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 228
S + LLEA+ + H+ I+HRDLKP+NIL++ + ++L+DFG S P + T
Sbjct: 204 SIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS-CHLEPGEKLRELCGT 262
Query: 229 LWYRPPEILLGAK-----VYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLG 283
Y PEIL + Y VD+W+ G I ++ F +I L I
Sbjct: 263 PGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQ- 321
Query: 284 TPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
Y+ PEW + + D+ S+++ +DP+ R++A+
Sbjct: 322 ---------------YQFSSPEWDDRSST---------VKDLISRLLQVDPEARLTAEQA 357
Query: 344 LQHEYFNQ 351
LQH +F +
Sbjct: 358 LQHPFFER 365
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 30/202 (14%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
+ L+AL + HS ++IHRD+K NIL+ G++KL DFG T ++ + V T ++
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWM 183
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPG 292
PE++ K Y VDIWS G + EMI + + ++ + L+ + T GTP
Sbjct: 184 APEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQ---- 237
Query: 293 VSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQV 352
P+K S I D ++ + +D ++R SAK +LQH++
Sbjct: 238 --------------NPEKLSAIFR-------DFLNRCLDMDVEKRGSAKELLQHQFL--- 273
Query: 353 EMVKPTLAVFPELGYGGNGCKD 374
++ KP ++ P + K+
Sbjct: 274 KIAKPLSSLTPLIAAAKEATKN 295
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
+ EI V++E K+PN++ D V +L++V E+L L D + T + +
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVC 122
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
+ L+AL + HS ++IHRD+K NIL+ G++KL DFG T ++ + V T ++
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW 182
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEM 168
PE++ K Y VDIWS G + EM
Sbjct: 183 MAPEVVT-RKAYGPKVDIWSLGIMAIEM 209
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 30/202 (14%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
+ L+AL + HS ++IHRD+K NIL+ G++KL DFG T ++ + V T ++
Sbjct: 125 ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWM 184
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPG 292
PE++ K Y VDIWS G + EMI + + ++ + L+ + T GTP
Sbjct: 185 APEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQ---- 238
Query: 293 VSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQV 352
P+K S I D ++ + +D ++R SAK ++QH++
Sbjct: 239 --------------NPEKLSAIFR-------DFLNRCLEMDVEKRGSAKELIQHQFL--- 274
Query: 353 EMVKPTLAVFPELGYGGNGCKD 374
++ KP ++ P + K+
Sbjct: 275 KIAKPLSSLTPLIAAAKEATKN 296
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
+ EI V++E K+PN++ D V +L++V E+L L D + T + +
Sbjct: 66 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVC 123
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
+ L+AL + HS ++IHRD+K NIL+ G++KL DFG T ++ + V T ++
Sbjct: 124 RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYW 183
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEM 168
PE++ K Y VDIWS G + EM
Sbjct: 184 MAPEVVT-RKAYGPKVDIWSLGIMAIEM 210
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQ 82
E +L E+ HP +++LH + KL+L+ +FLR DL L + V K YL +
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAE 135
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
L AL + HS II+RDLKP+NIL+++ G +KL DFGLS+ + T+ Y
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 195
Query: 143 PEILLGAKVYSTTVDIWSAGCIFSEM 168
PE+ + + ++ + D WS G + EM
Sbjct: 196 PEV-VNRRGHTQSADWWSFGVLMFEM 220
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 14/144 (9%)
Query: 156 VDIWSAGCIFSEMS------------YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA 203
+D G +F+ +S YL +L AL + HS II+RDLKP+NIL+++ G
Sbjct: 106 LDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH 165
Query: 204 LKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKK 263
+KL DFGLS+ + T+ Y PE+ + + ++ + D WS G + EM+T
Sbjct: 166 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV-VNRRGHTQSADWWSFGVLMFEMLTGT 224
Query: 264 TLFAGDSEIDQLFRIFRT-LGTPH 286
F G + + I + LG P
Sbjct: 225 LPFQGKDRKETMTMILKAKLGMPQ 248
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 5/151 (3%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKD-FLQTTPVPVPPALAKSYLYQ 82
EI +L HPN+++L D + L+++ EF D + P+ + + Q
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
L+AL Y H +IIHRDLK NIL G +KLADFG+S T + R + T ++
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMA 203
Query: 143 PEILLGA----KVYSTTVDIWSAGCIFSEMS 169
PE+++ + Y D+WS G EM+
Sbjct: 204 PEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
Q L+AL Y H +IIHRDLK NIL G +KLADFG+S T + R + T ++
Sbjct: 143 QTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWM 202
Query: 233 PPEILLGA----KVYSTTVDIWSAGCIFSEM 259
PE+++ + Y D+WS G EM
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQ 82
E +L E+ HP +++LH + KL+L+ +FLR DL L + V K YL +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAE 134
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
L AL + HS II+RDLKP+NIL+++ G +KL DFGLS+ + T+ Y
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 143 PEILLGAKVYSTTVDIWSAGCIFSEM 168
PE+ + + ++ + D WS G + EM
Sbjct: 195 PEV-VNRRGHTQSADWWSFGVLMFEM 219
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 14/144 (9%)
Query: 156 VDIWSAGCIFSEMS------------YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA 203
+D G +F+ +S YL +L AL + HS II+RDLKP+NIL+++ G
Sbjct: 105 LDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH 164
Query: 204 LKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKK 263
+KL DFGLS+ + T+ Y PE+ + + ++ + D WS G + EM+T
Sbjct: 165 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV-VNRRGHTQSADWWSFGVLMFEMLTGT 223
Query: 264 TLFAGDSEIDQLFRIFRT-LGTPH 286
F G + + I + LG P
Sbjct: 224 LPFQGKDRKETMTMILKAKLGMPQ 247
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQ 82
E +L E+ HP +++LH + KL+L+ +FLR DL L + V K YL +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAE 134
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
L AL + HS II+RDLKP+NIL+++ G +KL DFGLS+ + T+ Y
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 143 PEILLGAKVYSTTVDIWSAGCIFSEM 168
PE+ + + ++ + D WS G + EM
Sbjct: 195 PEV-VNRRGHTQSADWWSFGVLMFEM 219
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 14/144 (9%)
Query: 156 VDIWSAGCIFSEMS------------YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA 203
+D G +F+ +S YL +L AL + HS II+RDLKP+NIL+++ G
Sbjct: 105 LDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH 164
Query: 204 LKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKK 263
+KL DFGLS+ + T+ Y PE+ + + ++ + D WS G + EM+T
Sbjct: 165 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV-VNRRGHTQSADWWSFGVLMFEMLTGT 223
Query: 264 TLFAGDSEIDQLFRIFRT-LGTPH 286
F G + + I + LG P
Sbjct: 224 LPFQGKDRKETMTMILKAKLGMPQ 247
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 5/151 (3%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKD-FLQTTPVPVPPALAKSYLYQ 82
EI +L HPN+++L D + L+++ EF D + P+ + + Q
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
L+AL Y H +IIHRDLK NIL G +KLADFG+S T + R + T ++
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMA 203
Query: 143 PEILLGA----KVYSTTVDIWSAGCIFSEMS 169
PE+++ + Y D+WS G EM+
Sbjct: 204 PEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
Q L+AL Y H +IIHRDLK NIL G +KLADFG+S T + R + T ++
Sbjct: 143 QTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWM 202
Query: 233 PPEILLGA----KVYSTTVDIWSAGCIFSEM 259
PE+++ + Y D+WS G EM
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 13 QVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQT-TPVPV 71
+E EIS+LK L HPN+I+L DV +LV EF + + F Q
Sbjct: 85 NIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFY-EGGELFEQIINRHKF 143
Query: 72 PPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGAL---KLADFGLSRAFTIPM 128
A + + Q+L + Y H I+HRD+KP+NIL+ +L K+ DFGLS F+
Sbjct: 144 DECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY 203
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ + T +Y PE+L K Y+ D+WS G I
Sbjct: 204 -KLRDRLGTAYYIAPEVL--KKKYNEKCDVWSCGVI 236
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 31/176 (17%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGAL---KLADFGLSRAFTIPMNRYTHEVVTL 229
Q+L + Y H I+HRD+KP+NIL+ +L K+ DFGLS F+ + + T
Sbjct: 154 QILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY-KLRDRLGTA 212
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
+Y PE+L K Y+ D+WS G I ++ F G ++ +D+
Sbjct: 213 YYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQND---------------QDI 255
Query: 290 WPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
V K Y DF +W+ N+ D A ++ ++ D +R +A+ L
Sbjct: 256 IKKVEKGKYY-FDFNDWK--------NISDE-AKELIKLMLTYDYNKRCTAEEALN 301
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 5/151 (3%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKD-FLQTTPVPVPPALAKSYLYQ 82
EI +L HPN+++L D + L+++ EF D + P+ + + Q
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
L+AL Y H +IIHRDLK NIL G +KLADFG+S T + R + T ++
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMA 203
Query: 143 PEILLGA----KVYSTTVDIWSAGCIFSEMS 169
PE+++ + Y D+WS G EM+
Sbjct: 204 PEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
Q L+AL Y H +IIHRDLK NIL G +KLADFG+S T + R + T ++
Sbjct: 143 QTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWM 202
Query: 233 PPEILLGA----KVYSTTVDIWSAGCIFSEM 259
PE+++ + Y D+WS G EM
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 3/146 (2%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQ 82
E +L ++ HP V++LH + KL+L+ +FLR DL L + V K YL +
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAE 138
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
L L + HS II+RDLKP+NIL+++ G +KL DFGLS+ + T+ Y
Sbjct: 139 LALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMA 198
Query: 143 PEILLGAKVYSTTVDIWSAGCIFSEM 168
PE+ + + +S + D WS G + EM
Sbjct: 199 PEV-VNRQGHSHSADWWSYGVLMFEM 223
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 14/144 (9%)
Query: 156 VDIWSAGCIFSEMS------------YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA 203
+D G +F+ +S YL +L L + HS II+RDLKP+NIL+++ G
Sbjct: 109 LDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGH 168
Query: 204 LKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKK 263
+KL DFGLS+ + T+ Y PE+ + + +S + D WS G + EM+T
Sbjct: 169 IKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEV-VNRQGHSHSADWWSYGVLMFEMLTGS 227
Query: 264 TLFAGDSEIDQLFRIFRT-LGTPH 286
F G + + I + LG P
Sbjct: 228 LPFQGKDRKETMTLILKAKLGMPQ 251
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 8/148 (5%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD--LKDFLQTTPVPVPPALAKSYL 80
RE + + LKHPN++RLHD I + +LVF+ + +D + A A +
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS--EADASHCI 109
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVVT 137
Q+LE++ +CH I+HRDLKP+N+L+ +K A+KLADFGL+ + T
Sbjct: 110 QQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGT 169
Query: 138 LWYRPPEILLGAKVYSTTVDIWSAGCIF 165
Y PE+L Y VD+W+ G I
Sbjct: 170 PGYLSPEVLR-KDPYGKPVDMWACGVIL 196
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 29/192 (15%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Q+LE++ +CH I+HRDLKP+N+L+ +K A+KLADFGL+ +
Sbjct: 109 IQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAG 168
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE+L Y VD+W+ G I ++ F + + R+++ +
Sbjct: 169 TPGYLSPEVLR-KDPYGKPVDMWACGVILYILLVGYPPFWDEDQ----HRLYQQI----- 218
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHE 347
K Y PEW + P A D+ +K++ ++P +R++A L+H
Sbjct: 219 -------KAGAYDFPSPEW---------DTVTPEAKDLINKMLTINPAKRITASEALKHP 262
Query: 348 YFNQVEMVKPTL 359
+ Q V +
Sbjct: 263 WICQRSTVASMM 274
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD--LKDFLQTTPVPVPPALAKSYL 80
RE + + LKHPN++RLHD I + +L+F+ + +D + A A +
Sbjct: 70 REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS--EADASHCI 127
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVT 137
Q+LEA+ +CH ++HRDLKP+N+L+ K A+KLADFGL+ + T
Sbjct: 128 QQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGT 187
Query: 138 LWYRPPEILLGAKVYSTTVDIWSAGCIF 165
Y PE+L Y VD+W+ G I
Sbjct: 188 PGYLSPEVLR-KDPYGKPVDLWACGVIL 214
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 29/192 (15%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILIN---KSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Q+LEA+ +CH ++HRDLKP+N+L+ K A+KLADFGL+ +
Sbjct: 127 IQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAG 186
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE+L Y VD+W+ G I ++ F + + R+++ +
Sbjct: 187 TPGYLSPEVLR-KDPYGKPVDLWACGVILYILLVGYPPFWDEDQ----HRLYQQI----- 236
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHE 347
K Y PEW + P A D+ +K++ ++P +R++A L+H
Sbjct: 237 -------KAGAYDFPSPEW---------DTVTPEAKDLINKMLTINPSKRITAAEALKHP 280
Query: 348 YFNQVEMVKPTL 359
+ + V +
Sbjct: 281 WISHRSTVASCM 292
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 9/168 (5%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTT 67
R +++ V REI LK +HP++I+L+ VI +F+V E++ +L D++
Sbjct: 51 RQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKN 110
Query: 68 PVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP 127
+ ++ Q+L + YCH ++HRDLKP+N+L++ K+ADFGLS +
Sbjct: 111 G-RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS-D 168
Query: 128 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL 175
+ Y PE++ G VDIWS+G I LY LL
Sbjct: 169 GEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVI------LYALL 210
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 99/230 (43%), Gaps = 48/230 (20%)
Query: 140 YRPPEILLGAKVYSTTVDIW------SAGCIFS-----------EMSYLYQ-LLEALRYC 181
+R P I+ +V ST DI+ S G +F E L+Q +L + YC
Sbjct: 73 FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYC 132
Query: 182 HSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAK 241
H ++HRDLKP+N+L++ K+ADFGLS + + Y PE++ G
Sbjct: 133 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRXSCGSPNYAAPEVISGRL 191
Query: 242 VYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKT 301
VDIWS+G I ++ TL D + LF+ + G+ P Y
Sbjct: 192 YAGPEVDIWSSGVILYALLC-GTLPFDDDHVPTLFK----------KICDGIFYTPQY-- 238
Query: 302 DFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQ 351
LN P + + ++ +DP +R + K I +HE+F Q
Sbjct: 239 -------------LN---PSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 272
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 8/148 (5%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD--LKDFLQTTPVPVPPALAKSYL 80
RE + + LKHPN++RLHD I + +LVF+ + +D + A A +
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS--EADASHCI 109
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVVT 137
Q+LE++ +CH I+HRDLKP+N+L+ +K A+KLADFGL+ + T
Sbjct: 110 QQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGT 169
Query: 138 LWYRPPEILLGAKVYSTTVDIWSAGCIF 165
Y PE+L Y VD+W+ G I
Sbjct: 170 PGYLSPEVLR-KDPYGKPVDMWACGVIL 196
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 29/192 (15%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Q+LE++ +CH I+HRDLKP+N+L+ +K A+KLADFGL+ +
Sbjct: 109 IQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAG 168
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE+L Y VD+W+ G I ++ F + + R+++ +
Sbjct: 169 TPGYLSPEVLR-KDPYGKPVDMWACGVILYILLVGYPPFWDEDQ----HRLYQQI----- 218
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHE 347
K Y PEW + P A D+ +K++ ++P +R++A L+H
Sbjct: 219 -------KAGAYDFPSPEW---------DTVTPEAKDLINKMLTINPAKRITASEALKHP 262
Query: 348 YFNQVEMVKPTL 359
+ Q V +
Sbjct: 263 WICQRSTVASMM 274
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD--LKDFLQTTPVPVPPALAKSYL 80
RE + + LKH N++RLHD I + +LVF+ + +D + A A +
Sbjct: 52 REARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS--EADASHCI 109
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVT 137
Q+LEA+ +CH ++HRDLKP+N+L+ K A+KLADFGL+ + T
Sbjct: 110 QQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGT 169
Query: 138 LWYRPPEILLGAKVYSTTVDIWSAGCIF 165
Y PE+L + Y VDIW+ G I
Sbjct: 170 PGYLSPEVLR-KEAYGKPVDIWACGVIL 196
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 29/192 (15%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILIN---KSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Q+LEA+ +CH ++HRDLKP+N+L+ K A+KLADFGL+ +
Sbjct: 109 IQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAG 168
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE+L + Y VDIW+ G I ++ F D + +L++ +
Sbjct: 169 TPGYLSPEVLR-KEAYGKPVDIWACGVILYILLVGYPPF-WDEDQHKLYQQIKA------ 220
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHE 347
G P PEW + P A ++ ++++ ++P +R++A L+H
Sbjct: 221 ----GAYDFP-----SPEW---------DTVTPEAKNLINQMLTINPAKRITAHEALKHP 262
Query: 348 YFNQVEMVKPTL 359
+ Q V +
Sbjct: 263 WVCQRSTVASMM 274
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 8 PRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKD--FL 64
+S V L E++VLK+L HPN+++L++ +LV E R +L D L
Sbjct: 38 KKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL 97
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLS 121
+ V A+ + Q+L Y H I+HRDLKP+N+L+ ++ +K+ DFGLS
Sbjct: 98 RQKFSEVDAAVI---MKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
Query: 122 RAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
F + + + T +Y PE+L K Y D+WS G I
Sbjct: 155 AHFEVG-GKMKERLGTAYYIAPEVL--RKKYDEKCDVWSCGVIL 195
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 43/210 (20%)
Query: 152 YSTTVDIWSAGCIFSEM------------SYLYQLLEALRYCHSRRIIHRDLKPQNILI- 198
Y ++++ G +F E+ + Q+L Y H I+HRDLKP+N+L+
Sbjct: 79 YYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLE 138
Query: 199 --NKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 256
++ +K+ DFGLS F + + + T +Y PE+L K Y D+WS G I
Sbjct: 139 SKSRDALIKIVDFGLSAHFEVG-GKMKERLGTAYYIAPEVL--RKKYDEKCDVWSCGVIL 195
Query: 257 SEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILN 316
++ F G ++ + L R+ + + D P+W
Sbjct: 196 YILLCGYPPFGGQTDQEILKRVEK----------------GKFSFDPPDW--------TQ 231
Query: 317 LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
+ D A + ++ +P +R+SA+ L H
Sbjct: 232 VSDE-AKQLVKLMLTYEPSKRISAEEALNH 260
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 19 STALREISVLKELKHPNVIRLHDVIPVDFKLFLVFE-FLRQDLKDFLQTTPVPVPPALAK 77
ST LRE+ +LK+L HPN+++L +++ ++V E + +L D + A
Sbjct: 66 STILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-IKRKRFSEHDAA 124
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHE 134
+ Q+ + Y H I+HRDLKP+NIL+ K +K+ DFGLS F +
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDR 183
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
+ T +Y PE+L G Y D+WSAG I
Sbjct: 184 IGTAYYIAPEVLRG--TYDEKCDVWSAGVIL 212
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 43/218 (19%)
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEM------------SYLYQLLEALRYCHSRRIIHRDL 191
EIL + + ++++ G +F E+ + Q+ + Y H I+HRDL
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 192 KPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVD 248
KP+NIL+ K +K+ DFGLS F + + T +Y PE+L G Y D
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRIGTAYYIAPEVLRG--TYDEKCD 204
Query: 249 IWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRP 308
+WSAG I +++ F G +E D L R+ + Y D P+WR
Sbjct: 205 VWSAGVILYILLSGTPPFYGKNEYDILKRV----------------ETGKYAFDLPQWR- 247
Query: 309 KKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
+ D A D+ K++ P R++A L+H
Sbjct: 248 -------TISDD-AKDLIRKMLTFHPSLRITATQCLEH 277
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 19 STALREISVLKELKHPNVIRLHDVIPVDFKLFLVFE-FLRQDLKDFLQTTPVPVPPALAK 77
ST LRE+ +LK+L HPN+++L +++ ++V E + +L D + A
Sbjct: 66 STILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-IKRKRFSEHDAA 124
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHE 134
+ Q+ + Y H I+HRDLKP+NIL+ K +K+ DFGLS F +
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDR 183
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
+ T +Y PE+L G Y D+WSAG I
Sbjct: 184 IGTAYYIAPEVLRG--TYDEKCDVWSAGVIL 212
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 43/218 (19%)
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEM------------SYLYQLLEALRYCHSRRIIHRDL 191
EIL + + ++++ G +F E+ + Q+ + Y H I+HRDL
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 192 KPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVD 248
KP+NIL+ K +K+ DFGLS F + + T +Y PE+L G Y D
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRIGTAYYIAPEVLRG--TYDEKCD 204
Query: 249 IWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRP 308
+WSAG I +++ F G +E D L R+ + Y D P+WR
Sbjct: 205 VWSAGVILYILLSGTPPFYGKNEYDILKRV----------------ETGKYAFDLPQWR- 247
Query: 309 KKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
+ D A D+ K++ P R++A L+H
Sbjct: 248 -------TISDD-AKDLIRKMLTFHPSLRITATQCLEH 277
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 30/202 (14%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
+ L+AL + HS ++IHR++K NIL+ G++KL DFG T ++ + V T ++
Sbjct: 125 ECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWM 184
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPG 292
PE++ K Y VDIWS G + EMI + + ++ + L+ + T GTP
Sbjct: 185 APEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQ---- 238
Query: 293 VSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQV 352
P+K S I D ++ + +D ++R SAK ++QH++
Sbjct: 239 --------------NPEKLSAIFR-------DFLNRCLEMDVEKRGSAKELIQHQFL--- 274
Query: 353 EMVKPTLAVFPELGYGGNGCKD 374
++ KP ++ P + K+
Sbjct: 275 KIAKPLSSLTPLIAAAKEATKN 296
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
+ EI V++E K+PN++ D V +L++V E+L L D + T + +
Sbjct: 66 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVC 123
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
+ L+AL + HS ++IHR++K NIL+ G++KL DFG T ++ + V T ++
Sbjct: 124 RECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW 183
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEM 168
PE++ K Y VDIWS G + EM
Sbjct: 184 MAPEVVT-RKAYGPKVDIWSLGIMAIEM 210
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 8/148 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFE-FLRQDLKDFLQTTPVPVPPALAKSYL 80
LRE+ +LK+L HPN+++L++ +LV E + +L D + + A +
Sbjct: 98 LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARII 156
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVVT 137
Q+L + Y H +I+HRDLKP+N+L+ +K +++ DFGLS F + ++ T
Sbjct: 157 RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGT 215
Query: 138 LWYRPPEILLGAKVYSTTVDIWSAGCIF 165
+Y PE+L G Y D+WS G I
Sbjct: 216 AYYIAPEVLHG--TYDEKCDVWSTGVIL 241
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 43/207 (20%)
Query: 157 DIWSAGCIFSEM------------SYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKS 201
++++ G +F E+ + Q+L + Y H +I+HRDLKP+N+L+ +K
Sbjct: 130 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKD 189
Query: 202 GALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+++ DFGLS F + ++ T +Y PE+L G Y D+WS G I +++
Sbjct: 190 ANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLHG--TYDEKCDVWSTGVILYILLS 246
Query: 262 KKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPL 321
F G +E D L ++ + Y + P+W KK SE
Sbjct: 247 GCPPFNGANEYDILKKVEK----------------GKYTFELPQW--KKVSES------- 281
Query: 322 AVDVFSKIMALDPKQRVSAKTILQHEY 348
A D+ K++ P R+SA+ L HE+
Sbjct: 282 AKDLIRKMLTYVPSMRISARDALDHEW 308
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 8/148 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFE-FLRQDLKDFLQTTPVPVPPALAKSYL 80
LRE+ +LK+L HPN+++L++ +LV E + +L D + + A +
Sbjct: 97 LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARII 155
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVVT 137
Q+L + Y H +I+HRDLKP+N+L+ +K +++ DFGLS F + ++ T
Sbjct: 156 RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGT 214
Query: 138 LWYRPPEILLGAKVYSTTVDIWSAGCIF 165
+Y PE+L G Y D+WS G I
Sbjct: 215 AYYIAPEVLHG--TYDEKCDVWSTGVIL 240
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 43/207 (20%)
Query: 157 DIWSAGCIFSEM------------SYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKS 201
++++ G +F E+ + Q+L + Y H +I+HRDLKP+N+L+ +K
Sbjct: 129 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKD 188
Query: 202 GALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+++ DFGLS F + ++ T +Y PE+L G Y D+WS G I +++
Sbjct: 189 ANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLHG--TYDEKCDVWSTGVILYILLS 245
Query: 262 KKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPL 321
F G +E D L ++ + Y + P+W KK SE
Sbjct: 246 GCPPFNGANEYDILKKVEK----------------GKYTFELPQW--KKVSES------- 280
Query: 322 AVDVFSKIMALDPKQRVSAKTILQHEY 348
A D+ K++ P R+SA+ L HE+
Sbjct: 281 AKDLIRKMLTYVPSMRISARDALDHEW 307
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
Query: 8 PRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFE-FLRQDLKDFLQT 66
+ +V+ + + LRE+ +LK+L HPN+++L++ +LV E + +L D +
Sbjct: 60 SKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-I 118
Query: 67 TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRA 123
+ A + Q+L + Y H +I+HRDLKP+N+L+ +K +++ DFGLS
Sbjct: 119 SRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178
Query: 124 FTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
F + ++ T +Y PE+L G Y D+WS G I
Sbjct: 179 FEAS-KKMKDKIGTAYYIAPEVLHG--TYDEKCDVWSTGVIL 217
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 43/207 (20%)
Query: 157 DIWSAGCIFSEM------------SYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKS 201
++++ G +F E+ + Q+L + Y H +I+HRDLKP+N+L+ +K
Sbjct: 106 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKD 165
Query: 202 GALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+++ DFGLS F + ++ T +Y PE+L G Y D+WS G I +++
Sbjct: 166 ANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLHG--TYDEKCDVWSTGVILYILLS 222
Query: 262 KKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPL 321
F G +E D L ++ + Y + P+W KK SE
Sbjct: 223 GCPPFNGANEYDILKKVEK----------------GKYTFELPQW--KKVSES------- 257
Query: 322 AVDVFSKIMALDPKQRVSAKTILQHEY 348
A D+ K++ P R+SA+ L HE+
Sbjct: 258 AKDLIRKMLTYVPSMRISARDALDHEW 284
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
++E+ L++L+HPN I+ + +LV E+ D L+ P+ + +
Sbjct: 63 IKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH 122
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 141
L+ L Y HS +IHRD+K NIL+++ G +KL DFG S + P N + V T ++
Sbjct: 123 GALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFG-SASIMAPANXF---VGTPYWM 178
Query: 142 PPEILLGAK--VYSTTVDIWSAGCIFSEMS 169
PE++L Y VD+WS G E++
Sbjct: 179 APEVILAMDEGQYDGKVDVWSLGITCIELA 208
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 175 LEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPP 234
L+ L Y HS +IHRD+K NIL+++ G +KL DFG S + P N + V T ++ P
Sbjct: 125 LQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFG-SASIMAPANXF---VGTPYWMAP 180
Query: 235 EILLGAK--VYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
E++L Y VD+WS G E+ +K + + L+ I
Sbjct: 181 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 226
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
++E+ L++L+HPN I+ + +LV E+ D L+ P+ + +
Sbjct: 102 IKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH 161
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 141
L+ L Y HS +IHRD+K NIL+++ G +KL DFG S + P N + V T ++
Sbjct: 162 GALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFG-SASIMAPANXF---VGTPYWM 217
Query: 142 PPEILLGAK--VYSTTVDIWSAGCIFSEMS 169
PE++L Y VD+WS G E++
Sbjct: 218 APEVILAMDEGQYDGKVDVWSLGITCIELA 247
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 175 LEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPP 234
L+ L Y HS +IHRD+K NIL+++ G +KL DFG S + P N + V T ++ P
Sbjct: 164 LQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFG-SASIMAPANXF---VGTPYWMAP 219
Query: 235 EILLGAK--VYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRT 281
E++L Y VD+WS G E+ +K + + L+ I +
Sbjct: 220 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 268
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 2/151 (1%)
Query: 16 GVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPA 74
G+ E+ + +LKHP+++ L++ ++LV E ++ +L+ P
Sbjct: 53 GMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSEN 112
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
A+ +++Q++ + Y HS I+HRDL N+L+ ++ +K+ADFGL+ +P ++
Sbjct: 113 EARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL 172
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
T Y PEI + + D+WS GC+F
Sbjct: 173 CGTPNYISPEIATRS-AHGLESDVWSLGCMF 202
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
+++Q++ + Y HS I+HRDL N+L+ ++ +K+ADFGL+ +P ++ T
Sbjct: 117 FMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTP 176
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
Y PEI + + D+WS GC+F ++ + F D+ + L ++
Sbjct: 177 NYISPEIATRS-AHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV 224
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 14 VEGVPSTALREISVLKELKHPNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPV 71
E + E+++L+ELKHPN++R +D I + L++V E+ + T
Sbjct: 45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE 104
Query: 72 PPALAKSY----LYQLLEALRYCHSRR-----IIHRDLKPQNILINKSGALKLADFGLSR 122
L + + + QL AL+ CH R ++HRDLKP N+ ++ +KL DFGL+R
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164
Query: 123 AFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY---------Q 173
+ V T +Y PE + Y+ DIWS GC+ E+ L +
Sbjct: 165 ILNHDEDFAKEFVGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE 223
Query: 174 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 209
L +R RRI +R N +I + L L D+
Sbjct: 224 LAGKIREGKFRRIPYRYSDELNEIITR--MLNLKDY 257
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRR-----IIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
QL AL+ CH R ++HRDLKP N+ ++ +KL DFGL+R + V
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVG 178
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 259
T +Y PE + Y+ DIWS GC+ E+
Sbjct: 179 TPYYMSPE-QMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKD--FLQ 65
+S V L E++VLK+L HPN+++L++ +LV E R +L D L+
Sbjct: 56 KSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR 115
Query: 66 TTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSR 122
V A+ + Q+L Y H I+HRDLKP+N+L+ ++ +K+ DFGLS
Sbjct: 116 QKFSEVDAAVI---MKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA 172
Query: 123 AFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
F + + + T +Y PE+L K Y D+WS G I
Sbjct: 173 HFEVG-GKMKERLGTAYYIAPEVL--RKKYDEKCDVWSCGVIL 212
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 43/210 (20%)
Query: 152 YSTTVDIWSAGCIFSEM------------SYLYQLLEALRYCHSRRIIHRDLKPQNILI- 198
Y ++++ G +F E+ + Q+L Y H I+HRDLKP+N+L+
Sbjct: 96 YYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLE 155
Query: 199 --NKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 256
++ +K+ DFGLS F + + + T +Y PE+L K Y D+WS G I
Sbjct: 156 SKSRDALIKIVDFGLSAHFEVG-GKMKERLGTAYYIAPEVL--RKKYDEKCDVWSCGVIL 212
Query: 257 SEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILN 316
++ F G ++ + L R+ + + D P+W
Sbjct: 213 YILLCGYPPFGGQTDQEILKRVEKGK----------------FSFDPPDWT--------Q 248
Query: 317 LPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
+ D A + ++ +P +R+SA+ L H
Sbjct: 249 VSDE-AKQLVKLMLTYEPSKRISAEEALNH 277
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD--LKDFLQTTPVPVPPALAKSYL 80
RE + + LKHPN++RLHD I + +L+F+ + +D + A A +
Sbjct: 59 REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS--EADASHCI 116
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVT 137
Q+LEA+ +CH ++HR+LKP+N+L+ K A+KLADFGL+ + T
Sbjct: 117 QQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGT 176
Query: 138 LWYRPPEILLGAKVYSTTVDIWSAGCIF 165
Y PE+L Y VD+W+ G I
Sbjct: 177 PGYLSPEVLR-KDPYGKPVDLWACGVIL 203
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 29/192 (15%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILIN---KSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Q+LEA+ +CH ++HR+LKP+N+L+ K A+KLADFGL+ +
Sbjct: 116 IQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAG 175
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE+L Y VD+W+ G I ++ F + + R+++ +
Sbjct: 176 TPGYLSPEVLR-KDPYGKPVDLWACGVILYILLVGYPPFWDEDQ----HRLYQQI----- 225
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHE 347
K Y PEW + P A D+ +K++ ++P +R++A L+H
Sbjct: 226 -------KAGAYDFPSPEW---------DTVTPEAKDLINKMLTINPSKRITAAEALKHP 269
Query: 348 YFNQVEMVKPTL 359
+ + V +
Sbjct: 270 WISHRSTVASCM 281
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD--LKDFLQTTPVPVPPALAKSYL 80
RE + + LKHPN++RLHD I + +LVF+ + +D + A A +
Sbjct: 79 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS--EADASHCI 136
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVT 137
+Q+LE++ + H I+HRDLKP+N+L+ K A+KLADFGL+ + T
Sbjct: 137 HQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGT 196
Query: 138 LWYRPPEILLGAKVYSTTVDIWSAGCIF 165
Y PE+L Y VDIW+ G I
Sbjct: 197 PGYLSPEVLR-KDPYGKPVDIWACGVIL 223
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 29/192 (15%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILIN---KSGALKLADFGLSRAFTIPMNRYTHEVV 227
++Q+LE++ + H I+HRDLKP+N+L+ K A+KLADFGL+ +
Sbjct: 136 IHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAG 195
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE+L Y VDIW+ G I ++ F D + +L+ +
Sbjct: 196 TPGYLSPEVLR-KDPYGKPVDIWACGVILYILLVGYPPF-WDEDQHKLY----------Q 243
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHE 347
+ G P PEW + P A ++ ++++ ++P +R++A L+H
Sbjct: 244 QIKAGAYDFPS-----PEW---------DTVTPEAKNLINQMLTINPAKRITADQALKHP 289
Query: 348 YFNQVEMVKPTL 359
+ Q V +
Sbjct: 290 WVCQRSTVASMM 301
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 86/159 (54%), Gaps = 7/159 (4%)
Query: 10 SRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTP 68
++ +EG + EI+VL ++KHPN++ L D+ L+L+ + + +L D +
Sbjct: 52 AKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG 111
Query: 69 VPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNIL---INKSGALKLADFGLSRAFT 125
A ++Q+L+A++Y H I+HRDLKP+N+L +++ + ++DFGLS+
Sbjct: 112 FYTERD-ASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-ME 169
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
P + + T Y PE+ L K YS VD WS G I
Sbjct: 170 DPGSVLSTACGTPGYVAPEV-LAQKPYSKAVDCWSIGVI 207
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 30/179 (16%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNIL---INKSGALKLADFGLSRAFTIPMNRYTHEVV 227
++Q+L+A++Y H I+HRDLKP+N+L +++ + ++DFGLS+ P + +
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTACG 180
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE+ L K YS VD WS G I ++ F +++ +I +
Sbjct: 181 TPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE----- 234
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
Y+ D P W ++ D A D +M DP++R + + LQH
Sbjct: 235 -----------YEFDSPYWD--------DISDS-AKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 86/159 (54%), Gaps = 7/159 (4%)
Query: 10 SRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTP 68
++ +EG + EI+VL ++KHPN++ L D+ L+L+ + + +L D +
Sbjct: 52 AKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG 111
Query: 69 VPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNIL---INKSGALKLADFGLSRAFT 125
A ++Q+L+A++Y H I+HRDLKP+N+L +++ + ++DFGLS+
Sbjct: 112 FYTERD-ASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-ME 169
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
P + + T Y PE+ L K YS VD WS G I
Sbjct: 170 DPGSVLSTACGTPGYVAPEV-LAQKPYSKAVDCWSIGVI 207
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 30/179 (16%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNIL---INKSGALKLADFGLSRAFTIPMNRYTHEVV 227
++Q+L+A++Y H I+HRDLKP+N+L +++ + ++DFGLS+ P + +
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTACG 180
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE+ L K YS VD WS G I ++ F +++ +I +
Sbjct: 181 TPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE----- 234
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
Y+ D P W ++ D A D +M DP++R + + LQH
Sbjct: 235 -----------YEFDSPYWD--------DISDS-AKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 86/159 (54%), Gaps = 7/159 (4%)
Query: 10 SRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTP 68
++ +EG + EI+VL ++KHPN++ L D+ L+L+ + + +L D +
Sbjct: 52 AKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG 111
Query: 69 VPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNIL---INKSGALKLADFGLSRAFT 125
A ++Q+L+A++Y H I+HRDLKP+N+L +++ + ++DFGLS+
Sbjct: 112 FYTERD-ASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-ME 169
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
P + + T Y PE+ L K YS VD WS G I
Sbjct: 170 DPGSVLSTACGTPGYVAPEV-LAQKPYSKAVDCWSIGVI 207
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 30/179 (16%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNIL---INKSGALKLADFGLSRAFTIPMNRYTHEVV 227
++Q+L+A++Y H I+HRDLKP+N+L +++ + ++DFGLS+ P + +
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTACG 180
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE+ L K YS VD WS G I ++ F +++ +I +
Sbjct: 181 TPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE----- 234
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
Y+ D P W ++ D A D +M DP++R + + LQH
Sbjct: 235 -----------YEFDSPYWD--------DISDS-AKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 86/159 (54%), Gaps = 7/159 (4%)
Query: 10 SRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTP 68
++ +EG + EI+VL ++KHPN++ L D+ L+L+ + + +L D +
Sbjct: 52 AKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG 111
Query: 69 VPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNIL---INKSGALKLADFGLSRAFT 125
A ++Q+L+A++Y H I+HRDLKP+N+L +++ + ++DFGLS+
Sbjct: 112 FYTERD-ASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-ME 169
Query: 126 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
P + + T Y PE+ L K YS VD WS G I
Sbjct: 170 DPGSVLSTACGTPGYVAPEV-LAQKPYSKAVDCWSIGVI 207
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 30/179 (16%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNIL---INKSGALKLADFGLSRAFTIPMNRYTHEVV 227
++Q+L+A++Y H I+HRDLKP+N+L +++ + ++DFGLS+ P + +
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTACG 180
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE+ L K YS VD WS G I ++ F +++ +I +
Sbjct: 181 TPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE----- 234
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQH 346
Y+ D P W ++ D A D +M DP++R + + LQH
Sbjct: 235 -----------YEFDSPYWD--------DISDS-AKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 14 VEGVPSTALREISVLKELKHPNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPV 71
E + E+++L+ELKHPN++R +D I + L++V E+ + T
Sbjct: 45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE 104
Query: 72 PPALAKSY----LYQLLEALRYCHSRR-----IIHRDLKPQNILINKSGALKLADFGLSR 122
L + + + QL AL+ CH R ++HRDLKP N+ ++ +KL DFGL+R
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164
Query: 123 AFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY---------Q 173
+ V T +Y PE + Y+ DIWS GC+ E+ L +
Sbjct: 165 ILNHDTSFAKTFVGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE 223
Query: 174 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 209
L +R RRI +R N +I + L L D+
Sbjct: 224 LAGKIREGKFRRIPYRYSDELNEIITR--MLNLKDY 257
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRR-----IIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
QL AL+ CH R ++HRDLKP N+ ++ +KL DFGL+R + V
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVG 178
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 259
T +Y PE + Y+ DIWS GC+ E+
Sbjct: 179 TPYYMSPE-QMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
Query: 8 PRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFE-FLRQDLKDFLQT 66
+ +V+ + + LRE+ +LK+L HPN+++L++ +LV E + +L D +
Sbjct: 66 SKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-I 124
Query: 67 TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRA 123
+ A + Q+L + Y H +I+HRDLKP+N+L+ +K +++ DFGLS
Sbjct: 125 SRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 184
Query: 124 FTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
F + ++ T +Y PE+L G Y D+WS G I
Sbjct: 185 FEAS-KKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVIL 223
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 43/207 (20%)
Query: 157 DIWSAGCIFSEM------------SYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKS 201
++++ G +F E+ + Q+L + Y H +I+HRDLKP+N+L+ +K
Sbjct: 112 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKD 171
Query: 202 GALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+++ DFGLS F + ++ T +Y PE+L G Y D+WS G I +++
Sbjct: 172 ANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLS 228
Query: 262 KKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPL 321
F G +E D L ++ + Y + P+W KK SE
Sbjct: 229 GCPPFNGANEYDILKKVEKGK----------------YTFELPQW--KKVSES------- 263
Query: 322 AVDVFSKIMALDPKQRVSAKTILQHEY 348
A D+ K++ P R+SA+ L HE+
Sbjct: 264 AKDLIRKMLTYVPSMRISARDALDHEW 290
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 14 VEGVPSTALREISVLKELKHPNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPV 71
E + E+++L+ELKHPN++R +D I + L++V E+ + T
Sbjct: 45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE 104
Query: 72 PPALAKSY----LYQLLEALRYCHSRR-----IIHRDLKPQNILINKSGALKLADFGLSR 122
L + + + QL AL+ CH R ++HRDLKP N+ ++ +KL DFGL+R
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164
Query: 123 AFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY---------Q 173
+ V T +Y PE + Y+ DIWS GC+ E+ L +
Sbjct: 165 ILNHDTSFAKAFVGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE 223
Query: 174 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 209
L +R RRI +R N +I + L L D+
Sbjct: 224 LAGKIREGKFRRIPYRYSDELNEIITR--MLNLKDY 257
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRR-----IIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
QL AL+ CH R ++HRDLKP N+ ++ +KL DFGL+R + V
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVG 178
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 259
T +Y PE + Y+ DIWS GC+ E+
Sbjct: 179 TPYYMSPE-QMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFL------QTTPVPVPPALA 76
RE S+ LKHP+++ L + D L++VFEF+ D D A+A
Sbjct: 77 REASICHMLKHPHIVELLETYSSDGMLYMVFEFM--DGADLCFEIVKRADAGFVYSEAVA 134
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTH 133
Y+ Q+LEALRYCH IIHRD+KP +L+ S +KL FG++
Sbjct: 135 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG 194
Query: 134 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
V T + PE+ + + Y VD+W G I
Sbjct: 195 RVGTPHFMAPEV-VKREPYGKPVDVWGCGVIL 225
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 33/226 (14%)
Query: 132 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM---SYLYQLLEALRYCHSRRIIH 188
T+ + Y E + GA + V AG ++SE Y+ Q+LEALRYCH IIH
Sbjct: 96 TYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIH 155
Query: 189 RDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYST 245
RD+KP +L+ S +KL FG++ V T + PE+ + + Y
Sbjct: 156 RDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV-VKREPYGK 214
Query: 246 TVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPE 305
VD+W G I +++ F G E R+F E + G K+
Sbjct: 215 PVDVWGCGVILFILLSGCLPFYGTKE-----RLF-------EGIIKGKYKM--------- 253
Query: 306 WRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQ 351
P+++S I A D+ +++ LDP +R++ L H + +
Sbjct: 254 -NPRQWSHI----SESAKDLVRRMLMLDPAERITVYEALNHPWLKE 294
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 8/148 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFE-FLRQDLKDFLQTTPVPVPPALAKSYL 80
LRE+ +LK+L HPN+ +L++ +LV E + +L D + + A +
Sbjct: 74 LREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARII 132
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVVT 137
Q+L + Y H +I+HRDLKP+N+L+ +K +++ DFGLS F + ++ T
Sbjct: 133 RQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE-ASKKXKDKIGT 191
Query: 138 LWYRPPEILLGAKVYSTTVDIWSAGCIF 165
+Y PE+L G Y D+WS G I
Sbjct: 192 AYYIAPEVLHG--TYDEKCDVWSTGVIL 217
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 43/207 (20%)
Query: 157 DIWSAGCIFSEM------------SYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKS 201
++++ G +F E+ + Q+L + Y H +I+HRDLKP+N+L+ +K
Sbjct: 106 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKD 165
Query: 202 GALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+++ DFGLS F + ++ T +Y PE+L G Y D+WS G I +++
Sbjct: 166 ANIRIIDFGLSTHFE-ASKKXKDKIGTAYYIAPEVLHG--TYDEKCDVWSTGVILYILLS 222
Query: 262 KKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPL 321
F G +E D L ++ + Y + P+W KK SE
Sbjct: 223 GCPPFNGANEYDILKKVEK----------------GKYTFELPQW--KKVSES------- 257
Query: 322 AVDVFSKIMALDPKQRVSAKTILQHEY 348
A D+ K + P R+SA+ L HE+
Sbjct: 258 AKDLIRKXLTYVPSXRISARDALDHEW 284
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFL------QTTPVPVPPALA 76
RE S+ LKHP+++ L + D L++VFEF+ D D A+A
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGMLYMVFEFM--DGADLCFEIVKRADAGFVYSEAVA 132
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTH 133
Y+ Q+LEALRYCH IIHRD+KP +L+ S +KL FG++
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG 192
Query: 134 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
V T + PE+ + + Y VD+W G I
Sbjct: 193 RVGTPHFMAPEV-VKREPYGKPVDVWGCGVIL 223
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 33/226 (14%)
Query: 132 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM---SYLYQLLEALRYCHSRRIIH 188
T+ + Y E + GA + V AG ++SE Y+ Q+LEALRYCH IIH
Sbjct: 94 TYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIH 153
Query: 189 RDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYST 245
RD+KP +L+ S +KL FG++ V T + PE+ + + Y
Sbjct: 154 RDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV-VKREPYGK 212
Query: 246 TVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPE 305
VD+W G I +++ F G E R+F E + G K+
Sbjct: 213 PVDVWGCGVILFILLSGCLPFYGTKE-----RLF-------EGIIKGKYKM--------- 251
Query: 306 WRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQ 351
P+++S I A D+ +++ LDP +R++ L H + +
Sbjct: 252 -NPRQWSHI----SESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 9/163 (5%)
Query: 10 SRVQVEGVPSTALREISVLKELK-HPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTT 67
S +V+ + L+E+ +L+++ HPN+I+L D + FLVF+ +++ +L D+L T
Sbjct: 46 SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TE 104
Query: 68 PVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP 127
V + + + LLE + H I+HRDLKP+NIL++ +KL DFG S P
Sbjct: 105 KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD-P 163
Query: 128 MNRYTHEVVTLWYRPPEILLGAK-----VYSTTVDIWSAGCIF 165
+ T Y PEI+ + Y VD+WS G I
Sbjct: 164 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 206
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 174 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 233
LLE + H I+HRDLKP+NIL++ +KL DFG S P + T Y
Sbjct: 120 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD-PGEKLREVCGTPSYLA 178
Query: 234 PEILLGAK-----VYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
PEI+ + Y VD+WS G I ++ F ++ L I
Sbjct: 179 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG------- 231
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
Y+ PEW +S+ + D+ S+ + + P++R +A+ L H +
Sbjct: 232 ---------NYQFGSPEW--DDYSDTVK-------DLVSRFLVVQPQKRYTAEEALAHPF 273
Query: 349 FNQ 351
F Q
Sbjct: 274 FQQ 276
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 9/163 (5%)
Query: 10 SRVQVEGVPSTALREISVLKELK-HPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTT 67
S +V+ + L+E+ +L+++ HPN+I+L D + FLVF+ +++ +L D+L T
Sbjct: 59 SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TE 117
Query: 68 PVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP 127
V + + + LLE + H I+HRDLKP+NIL++ +KL DFG S P
Sbjct: 118 KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD-P 176
Query: 128 MNRYTHEVVTLWYRPPEILLGAK-----VYSTTVDIWSAGCIF 165
+ T Y PEI+ + Y VD+WS G I
Sbjct: 177 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 174 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 233
LLE + H I+HRDLKP+NIL++ +KL DFG S P + T Y
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD-PGEKLREVCGTPSYLA 191
Query: 234 PEILLGAK-----VYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
PEI+ + Y VD+WS G I ++ F ++ L I
Sbjct: 192 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG------- 244
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
Y+ PEW +S+ + D+ S+ + + P++R +A+ L H +
Sbjct: 245 ---------NYQFGSPEW--DDYSDTVK-------DLVSRFLVVQPQKRYTAEEALAHPF 286
Query: 349 FNQ 351
F Q
Sbjct: 287 FQQ 289
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-D 59
++S R SR ++E RE+++L+E++HPN+I LHD+ + L+ E + +
Sbjct: 49 RLSSSRRGVSREEIE-------REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGE 101
Query: 60 LKDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKL 115
L DFL + A +L Q+L+ + Y HS+RI H DLKP+NI++ +KL
Sbjct: 102 LFDFLAEKE-SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKL 160
Query: 116 ADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
DFG++ N + + T + PEI + + D+WS G I
Sbjct: 161 IDFGIAHKIE-AGNEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 207
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTHE 225
+L Q+L+ + Y HS+RI H DLKP+NI++ +KL DFG++ N + +
Sbjct: 120 FLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE-AGNEFKNI 178
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
T + PEI + + D+WS G I +++ + F G+++ + L
Sbjct: 179 FGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL---------- 227
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
+ + DF E E + LA D +++ DPK+R+ L+
Sbjct: 228 --------TNISAVNYDFDE-------EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLE 272
Query: 346 H 346
H
Sbjct: 273 H 273
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-D 59
++S R SR ++E RE+++L+E++HPN+I LHD+ + L+ E + +
Sbjct: 42 RLSSSRRGVSREEIE-------REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGE 94
Query: 60 LKDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKL 115
L DFL + A +L Q+L+ + Y HS+RI H DLKP+NI++ +KL
Sbjct: 95 LFDFLAEKE-SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKL 153
Query: 116 ADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
DFG++ N + + T + PEI + + D+WS G I
Sbjct: 154 IDFGIAHKIE-AGNEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 200
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 31/187 (16%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTHE 225
+L Q+L+ + Y HS+RI H DLKP+NI++ +KL DFG++ N + +
Sbjct: 113 FLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE-AGNEFKNI 171
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
T + PEI + + D+WS G I +++ + F G+++ + L
Sbjct: 172 FGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL---------- 220
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
+ + DF E E + LA D +++ DPK+R++ L+
Sbjct: 221 --------TNISAVNYDFDE-------EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265
Query: 346 HEYFNQV 352
H + +
Sbjct: 266 HSWIKAI 272
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 9/163 (5%)
Query: 10 SRVQVEGVPSTALREISVLKELK-HPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTT 67
S +V+ + L+E+ +L+++ HPN+I+L D + FLVF+ +++ +L D+L T
Sbjct: 59 SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TE 117
Query: 68 PVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP 127
V + + + LLE + H I+HRDLKP+NIL++ +KL DFG S P
Sbjct: 118 KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD-P 176
Query: 128 MNRYTHEVVTLWYRPPEILLGAK-----VYSTTVDIWSAGCIF 165
+ T Y PEI+ + Y VD+WS G I
Sbjct: 177 GEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 174 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 233
LLE + H I+HRDLKP+NIL++ +KL DFG S P + T Y
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD-PGEKLRSVCGTPSYLA 191
Query: 234 PEILLGAK-----VYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
PEI+ + Y VD+WS G I ++ F ++ L I
Sbjct: 192 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG------- 244
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
Y+ PEW +S+ + D+ S+ + + P++R +A+ L H +
Sbjct: 245 ---------NYQFGSPEW--DDYSDTVK-------DLVSRFLVVQPQKRYTAEEALAHPF 286
Query: 349 FNQ 351
F Q
Sbjct: 287 FQQ 289
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQL 83
EI++ K L +P+V+ H D +++V E R+ L V A+ ++ Q
Sbjct: 76 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 135
Query: 84 LEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPP 143
++ ++Y H+ R+IHRDLK N+ +N +K+ DFGL+ R T Y P
Sbjct: 136 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAP 195
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL 175
E+L K +S VDIWS GCI LY LL
Sbjct: 196 EVLC-KKGHSFEVDIWSLGCI------LYTLL 220
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
++ Q ++ ++Y H+ R+IHRDLK N+ +N +K+ DFGL+ R T
Sbjct: 131 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP 190
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
Y PE+L K +S VDIWS GCI ++ K F + RI
Sbjct: 191 NYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI 238
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKD-FLQTTPVPVPPALAKSYLYQ 82
EI +L HPN+++L D + L+++ EF D + P+ + + Q
Sbjct: 57 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 116
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNRYTHEVVTLWYR 141
L+AL Y H +IIHRDLK NIL G +KLADFG+S T + R + T ++
Sbjct: 117 TLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWM 176
Query: 142 PPEILLGA----KVYSTTVDIWSAGCIFSEMS 169
PE+++ + Y D+WS G EM+
Sbjct: 177 APEVVMCETSKDRPYDYKADVWSLGITLIEMA 208
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNRYTHEVVTLWY 231
Q L+AL Y H +IIHRDLK NIL G +KLADFG+S T + R + T ++
Sbjct: 116 QTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYW 175
Query: 232 RPPEILLGA----KVYSTTVDIWSAGCIFSEM 259
PE+++ + Y D+WS G EM
Sbjct: 176 MAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 84/172 (48%), Gaps = 14/172 (8%)
Query: 11 RVQVEGVPSTALR-------EISVLKELKHPNVIR-LHDVIPVDFKLFLVFEFLRQDLKD 62
R+ ++ +P R EI++ K LKH N+++ L F + + L
Sbjct: 49 RIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSA 108
Query: 63 FLQT--TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINK-SGALKLADFG 119
L++ P+ Y Q+LE L+Y H +I+HRD+K N+LIN SG LK++DFG
Sbjct: 109 LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFG 168
Query: 120 LSRAFTIPMNRYTHEVV-TLWYRPPEIL-LGAKVYSTTVDIWSAGCIFSEMS 169
S+ +N T TL Y PEI+ G + Y DIWS GC EM+
Sbjct: 169 TSKRLA-GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMA 219
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINK-SGALKLADFGLSRAFTIPMNRYTHEVV- 227
Y Q+LE L+Y H +I+HRD+K N+LIN SG LK++DFG S+ +N T
Sbjct: 127 YTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTG 185
Query: 228 TLWYRPPEIL-LGAKVYSTTVDIWSAGCIFSEMITKKTLF 266
TL Y PEI+ G + Y DIWS GC EM T K F
Sbjct: 186 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQL 83
EI++ K L +P+V+ H D +++V E R+ L V A+ ++ Q
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 84 LEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPP 143
++ ++Y H+ R+IHRDLK N+ +N +K+ DFGL+ R T Y P
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAP 211
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL 175
E+L K +S VDIWS GCI LY LL
Sbjct: 212 EVLC-KKGHSFEVDIWSLGCI------LYTLL 236
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
++ Q ++ ++Y H+ R+IHRDLK N+ +N +K+ DFGL+ R T
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP 206
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
Y PE+L K +S VDIWS GCI ++ K F + RI
Sbjct: 207 NYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI 254
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 19 STALREISVLKELKHPNVIRLHDVIPVDFKLFLVFE-FLRQDLKDFLQTTPVPVPPALAK 77
S L E++VLK L HPN+++L+D +LV E + +L D + + A
Sbjct: 81 SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI-IHRMKFNEVDAA 139
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHE 134
+ Q+L + Y H I+HRDLKP+N+L+ K +K+ DFGLS F +
Sbjct: 140 VIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKKMKER 198
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
+ T +Y PE+L K Y D+WS G I
Sbjct: 199 LGTAYYIAPEVL--RKKYDEKCDVWSIGVIL 227
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 152 YSTTVDIWSAGCIFSEMSY------------LYQLLEALRYCHSRRIIHRDLKPQNILIN 199
Y ++ + G +F E+ + + Q+L + Y H I+HRDLKP+N+L+
Sbjct: 111 YYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLE 170
Query: 200 ---KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 256
K +K+ DFGLS F + + T +Y PE+L K Y D+WS G I
Sbjct: 171 SKEKDALIKIVDFGLSAVFE-NQKKMKERLGTAYYIAPEVL--RKKYDEKCDVWSIGVIL 227
Query: 257 SEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILN 316
++ F G ++ + L ++ + Y D PEW+ N
Sbjct: 228 FILLAGYPPFGGQTDQEILRKVEK----------------GKYTFDSPEWK--------N 263
Query: 317 LPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQVEMVKPTLAVFPELG 366
+ + A D+ +++ D ++R+SA+ L+H + ++ K + P L
Sbjct: 264 VSEG-AKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLA 312
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQL 83
EI++ K L +P+V+ H D +++V E R+ L V A+ ++ Q
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 84 LEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPP 143
++ ++Y H+ R+IHRDLK N+ +N +K+ DFGL+ R T Y P
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAP 211
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL 175
E+L K +S VDIWS GCI LY LL
Sbjct: 212 EVLC-KKGHSFEVDIWSLGCI------LYTLL 236
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
++ Q ++ ++Y H+ R+IHRDLK N+ +N +K+ DFGL+ R T
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTP 206
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
Y PE+L K +S VDIWS GCI ++ K F + RI
Sbjct: 207 NYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI 254
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQL 83
EI++ K L +P+V+ H D +++V E R+ L V A+ ++ Q
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 84 LEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPP 143
++ ++Y H+ R+IHRDLK N+ +N +K+ DFGL+ R T Y P
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAP 211
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL 175
E+L K +S VDIWS GCI LY LL
Sbjct: 212 EVLC-KKGHSFEVDIWSLGCI------LYTLL 236
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
++ Q ++ ++Y H+ R+IHRDLK N+ +N +K+ DFGL+ R T
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTP 206
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
Y PE+L K +S VDIWS GCI ++ K F + RI
Sbjct: 207 NYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI 254
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 31/184 (16%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y +++ L++ HS+ I++RDLK NIL++K G +K+ADFG+ + + + T
Sbjct: 124 YAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTP 183
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PEILLG K Y+ +VD WS G + EM+ ++ F G E ++LF R
Sbjct: 184 DYIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDE-EELFHSIRMDN------ 235
Query: 290 WPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAK-TILQHEY 348
P Y P W K+ A D+ K+ +P++R+ + I QH
Sbjct: 236 -------PFY----PRWLEKE-----------AKDLLVKLFVREPEKRLGVRGDIRQHPL 273
Query: 349 FNQV 352
F ++
Sbjct: 274 FREI 277
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 3/138 (2%)
Query: 32 KHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLEALRYC 90
+HP + + LF V E+L DL +Q+ + A Y +++ L++
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFL 135
Query: 91 HSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAK 150
HS+ I++RDLK NIL++K G +K+ADFG+ + + + T Y PEILLG K
Sbjct: 136 HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQK 195
Query: 151 VYSTTVDIWSAGCIFSEM 168
Y+ +VD WS G + EM
Sbjct: 196 -YNHSVDWWSFGVLLYEM 212
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 77/153 (50%), Gaps = 7/153 (4%)
Query: 23 REISVLKELKHPNVIR-LHDVIPVDFKLFLVFEFLRQDLKDFLQT--TPVPVPPALAKSY 79
EI++ K LKH N+++ L F + + L L++ P+ Y
Sbjct: 54 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFY 113
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINK-SGALKLADFGLSRAFTIPMNRYTHEVV-T 137
Q+LE L+Y H +I+HRD+K N+LIN SG LK++DFG S+ +N T T
Sbjct: 114 TKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGT 172
Query: 138 LWYRPPEIL-LGAKVYSTTVDIWSAGCIFSEMS 169
L Y PEI+ G + Y DIWS GC EM+
Sbjct: 173 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMA 205
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINK-SGALKLADFGLSRAFTIPMNRYTHEVV- 227
Y Q+LE L+Y H +I+HRD+K N+LIN SG LK++DFG S+ +N T
Sbjct: 113 YTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTG 171
Query: 228 TLWYRPPEIL-LGAKVYSTTVDIWSAGCIFSEMITKKTLF 266
TL Y PEI+ G + Y DIWS GC EM T K F
Sbjct: 172 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPV-PPALAKSYLYQ 82
E ++L+E+KHP ++ L KL+L+ E+L + F+Q + A YL +
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGG-ELFMQLEREGIFMEDTACFYLAE 129
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV-TLWYR 141
+ AL + H + II+RDLKP+NI++N G +KL DFGL + +I TH T+ Y
Sbjct: 130 ISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHXFCGTIEYM 188
Query: 142 PPEILLGAKVYSTTVDIWSAGCIFSEM 168
PEIL+ + ++ VD WS G + +M
Sbjct: 189 APEILMRSG-HNRAVDWWSLGALMYDM 214
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 16/146 (10%)
Query: 148 GAKVYSTTVDIWSAGCIFSEMS------------YLYQLLEALRYCHSRRIIHRDLKPQN 195
G K+Y ++ S G +F ++ YL ++ AL + H + II+RDLKP+N
Sbjct: 93 GGKLY-LILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPEN 151
Query: 196 ILINKSGALKLADFGLSRAFTIPMNRYTHEVV-TLWYRPPEILLGAKVYSTTVDIWSAGC 254
I++N G +KL DFGL + +I TH T+ Y PEIL+ + ++ VD WS G
Sbjct: 152 IMLNHQGHVKLTDFGLCKE-SIHDGTVTHXFCGTIEYMAPEILMRSG-HNRAVDWWSLGA 209
Query: 255 IFSEMITKKTLFAGDSEIDQLFRIFR 280
+ +M+T F G++ + +I +
Sbjct: 210 LMYDMLTGAPPFTGENRKKTIDKILK 235
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 31/184 (16%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y +++ L++ HS+ I++RDLK NIL++K G +K+ADFG+ + + + T
Sbjct: 123 YAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTP 182
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PEILLG K Y+ +VD WS G + EM+ ++ F G E ++LF R
Sbjct: 183 DYIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDE-EELFHSIRMDN------ 234
Query: 290 WPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAK-TILQHEY 348
P Y P W K+ A D+ K+ +P++R+ + I QH
Sbjct: 235 -------PFY----PRWLEKE-----------AKDLLVKLFVREPEKRLGVRGDIRQHPL 272
Query: 349 FNQV 352
F ++
Sbjct: 273 FREI 276
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 3/138 (2%)
Query: 32 KHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLEALRYC 90
+HP + + LF V E+L DL +Q+ + A Y +++ L++
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFL 134
Query: 91 HSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAK 150
HS+ I++RDLK NIL++K G +K+ADFG+ + + + T Y PEILLG K
Sbjct: 135 HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQK 194
Query: 151 VYSTTVDIWSAGCIFSEM 168
Y+ +VD WS G + EM
Sbjct: 195 -YNHSVDWWSFGVLLYEM 211
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPV-PPALAKSYLYQ 82
E ++L+E+KHP ++ L KL+L+ E+L + F+Q + A YL +
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGG-ELFMQLEREGIFMEDTACFYLAE 129
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV-TLWYR 141
+ AL + H + II+RDLKP+NI++N G +KL DFGL + +I TH T+ Y
Sbjct: 130 ISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHTFCGTIEYM 188
Query: 142 PPEILLGAKVYSTTVDIWSAGCIFSEM 168
PEIL+ + ++ VD WS G + +M
Sbjct: 189 APEILMRSG-HNRAVDWWSLGALMYDM 214
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 16/146 (10%)
Query: 148 GAKVYSTTVDIWSAGCIFSEMS------------YLYQLLEALRYCHSRRIIHRDLKPQN 195
G K+Y ++ S G +F ++ YL ++ AL + H + II+RDLKP+N
Sbjct: 93 GGKLY-LILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPEN 151
Query: 196 ILINKSGALKLADFGLSRAFTIPMNRYTHEVV-TLWYRPPEILLGAKVYSTTVDIWSAGC 254
I++N G +KL DFGL + +I TH T+ Y PEIL+ + ++ VD WS G
Sbjct: 152 IMLNHQGHVKLTDFGLCKE-SIHDGTVTHTFCGTIEYMAPEILMRSG-HNRAVDWWSLGA 209
Query: 255 IFSEMITKKTLFAGDSEIDQLFRIFR 280
+ +M+T F G++ + +I +
Sbjct: 210 LMYDMLTGAPPFTGENRKKTIDKILK 235
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 84/163 (51%), Gaps = 15/163 (9%)
Query: 7 RPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQ 65
R SR ++E RE+++L+E++HPN+I LHD+ + L+ E + +L DFL
Sbjct: 69 RGVSREEIE-------REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA 121
Query: 66 TTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLS 121
+ A +L Q+L+ + Y HS+RI H DLKP+NI++ +KL DFG++
Sbjct: 122 EKE-SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
Query: 122 RAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
N + + T + PEI + + D+WS G I
Sbjct: 181 HKIE-AGNEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 221
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 31/187 (16%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTHE 225
+L Q+L+ + Y HS+RI H DLKP+NI++ +KL DFG++ N + +
Sbjct: 134 FLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE-AGNEFKNI 192
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
T + PEI + + D+WS G I +++ + F G+++ + L
Sbjct: 193 FGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL---------- 241
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
+ + DF E E + LA D +++ DPK+R+ L+
Sbjct: 242 --------TNISAVNYDFDE-------EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLE 286
Query: 346 HEYFNQV 352
H + +
Sbjct: 287 HSWIKAI 293
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKD--FLQTTPVPVPPALAKSYLY 81
EI +L HP +++L D KL+++ EF D L+ P + +
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI-QVVCR 124
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 141
Q+LEAL + HS+RIIHRDLK N+L+ G ++LADFG+S + + + T ++
Sbjct: 125 QMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWM 184
Query: 142 PPEILLGAKV----YSTTVDIWSAGCIFSEMSYL 171
PE+++ + Y DIWS G EM+ +
Sbjct: 185 APEVVMCETMKDTPYDYKADIWSLGITLIEMAQI 218
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 36/187 (19%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
Q+LEAL + HS+RIIHRDLK N+L+ G ++LADFG+S + + + T ++
Sbjct: 125 QMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWM 184
Query: 233 PPEILLGAKV----YSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
PE+++ + Y DIWS G EM + PH +
Sbjct: 185 APEVVMCETMKDTPYDYKADIWSLGITLIEMA--------------------QIEPPHHE 224
Query: 289 VWPGVSKLPIYKTDFPE-WRPKKFSEILNLPDPLAVDVFSKIMALD--PKQRVSAKTILQ 345
+ P L I K+D P P K+S + D F KI ALD P+ R SA +L+
Sbjct: 225 LNPMRVLLKIAKSDPPTLLTPSKWS--VEFRD------FLKI-ALDKNPETRPSAAQLLE 275
Query: 346 HEYFNQV 352
H + + +
Sbjct: 276 HPFVSSI 282
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKD--FLQTTPVPVPPALAKSYLY 81
EI +L HP +++L D KL+++ EF D L+ P + +
Sbjct: 58 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI-QVVCR 116
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 141
Q+LEAL + HS+RIIHRDLK N+L+ G ++LADFG+S + + + T ++
Sbjct: 117 QMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWM 176
Query: 142 PPEILLGAKV----YSTTVDIWSAGCIFSEMSYL 171
PE+++ + Y DIWS G EM+ +
Sbjct: 177 APEVVMCETMKDTPYDYKADIWSLGITLIEMAQI 210
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 36/187 (19%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
Q+LEAL + HS+RIIHRDLK N+L+ G ++LADFG+S + + + T ++
Sbjct: 117 QMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWM 176
Query: 233 PPEILLGAKV----YSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
PE+++ + Y DIWS G EM + PH +
Sbjct: 177 APEVVMCETMKDTPYDYKADIWSLGITLIEM--------------------AQIEPPHHE 216
Query: 289 VWPGVSKLPIYKTDFPE-WRPKKFSEILNLPDPLAVDVFSKIMALD--PKQRVSAKTILQ 345
+ P L I K+D P P K+S + D F KI ALD P+ R SA +L+
Sbjct: 217 LNPMRVLLKIAKSDPPTLLTPSKWS--VEFRD------FLKI-ALDKNPETRPSAAQLLE 267
Query: 346 HEYFNQV 352
H + + +
Sbjct: 268 HPFVSSI 274
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 94/217 (43%), Gaps = 39/217 (17%)
Query: 144 EILLGAKVYSTTVDIWSAGCIFSE---MSYLYQLLEALRYCHSRRIIHRDLKPQNILINK 200
E G ++ V + G SE + Q++ AL Y HS+ ++H+DLKP+NIL
Sbjct: 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQD 159
Query: 201 SGA---LKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFS 257
+ +K+ DFGL+ F T+ T Y PE+ + + DIWSAG +
Sbjct: 160 TSPHSPIKIIDFGLAELFKSD-EHSTNAAGTALYMAPEVF--KRDVTFKCDIWSAGVVMY 216
Query: 258 EMITKKTLFAGDS--EIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEIL 315
++T F G S E+ Q K P Y E RP
Sbjct: 217 FLLTGCLPFTGTSLEEVQQ----------------KATYKEPNYAV---ECRPLT----- 252
Query: 316 NLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQV 352
P AVD+ +++ DP++R SA +L HE+F Q
Sbjct: 253 ----PQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 18/169 (10%)
Query: 6 SRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQ 65
++ RS+V +E + + EI VLK L HPN+I++ +V +++V E + L+
Sbjct: 56 NKDRSQVPMEQIEA----EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGG--ELLE 109
Query: 66 --TTPVPVPPALAKSY----LYQLLEALRYCHSRRIIHRDLKPQNILINKS---GALKLA 116
+ AL++ Y + Q++ AL Y HS+ ++H+DLKP+NIL + +K+
Sbjct: 110 RIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKII 169
Query: 117 DFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
DFGL+ F T+ T Y PE+ + + DIWSAG +
Sbjct: 170 DFGLAELFKSD-EHSTNAAGTALYMAPEVF--KRDVTFKCDIWSAGVVM 215
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLK-DFLQTTPVPVPPALAKSYLY 81
+EI+VL + P V + + D KL+++ E+L D L+ P P+ + L
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIATILR 126
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 141
++L+ L Y HS + IHRD+K N+L+++ G +KLADFG++ T + V T ++
Sbjct: 127 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWM 186
Query: 142 PPEILLGAKVYSTTVDIWSAGCIFSEMS 169
PE+ + Y + DIWS G E++
Sbjct: 187 APEV-IKQSAYDSKADIWSLGITAIELA 213
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
L ++L+ L Y HS + IHRD+K N+L+++ G +KLADFG++ T + V T +
Sbjct: 125 LREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF 184
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEM 259
+ PE+ + Y + DIWS G E+
Sbjct: 185 WMAPEV-IKQSAYDSKADIWSLGITAIEL 212
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLK-DFLQTTPVPVPPALAKSYLY 81
+EI+VL + P V + + D KL+++ E+L D L+ P P+ + L
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIATILR 111
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 141
++L+ L Y HS + IHRD+K N+L+++ G +KLADFG++ T + V T ++
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWM 171
Query: 142 PPEILLGAKVYSTTVDIWSAGCIFSEMS 169
PE+ + Y + DIWS G E++
Sbjct: 172 APEV-IKQSAYDSKADIWSLGITAIELA 198
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
L ++L+ L Y HS + IHRD+K N+L+++ G +KLADFG++ T + V T +
Sbjct: 110 LREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF 169
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEM 259
+ PE+ + Y + DIWS G E+
Sbjct: 170 WMAPEV-IKQSAYDSKADIWSLGITAIEL 197
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 23 REISVLKELKHPNVIRLHDV----IPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAK 77
RE L HP ++ ++D P ++V E++ L+D + T P+ P A
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAI 119
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV- 136
+ +AL + H IIHRD+KP NI+I+ + A+K+ DFG++RA N T
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 137 --TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T Y PE G V + + D++S GC+ E+
Sbjct: 180 IGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEV 212
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 176 EALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV---TLWYR 232
+AL + H IIHRD+KP NI+I+ + A+K+ DFG++RA N T T Y
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDS 270
PE G V + + D++S GC+ E++T + F GDS
Sbjct: 187 SPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 23 REISVLKELKHPNVIRLHDV----IPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAK 77
RE L HP ++ ++D P ++V E++ L+D + T P+ P A
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAI 119
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV- 136
+ +AL + H IIHRD+KP NI+I+ + A+K+ DFG++RA N T
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 137 --TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T Y PE G V + + D++S GC+ E+
Sbjct: 180 IGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEV 212
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 176 EALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV---TLWYR 232
+AL + H IIHRD+KP NI+I+ + A+K+ DFG++RA N T T Y
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
PE G V + + D++S GC+ E++T + F GDS + ++ R
Sbjct: 187 SPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLK-DFLQTTPVPVPPALAKSYLY 81
+EI+VL + P V + + D KL+++ E+L D L+ P P+ + L
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIATILR 131
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 141
++L+ L Y HS + IHRD+K N+L+++ G +KLADFG++ T + V T ++
Sbjct: 132 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 191
Query: 142 PPEILLGAKVYSTTVDIWSAGCIFSEMS 169
PE+ + Y + DIWS G E++
Sbjct: 192 APEV-IKQSAYDSKADIWSLGITAIELA 218
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
L ++L+ L Y HS + IHRD+K N+L+++ G +KLADFG++ T + V T +
Sbjct: 130 LREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF 189
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEM 259
+ PE+ + Y + DIWS G E+
Sbjct: 190 WMAPEV-IKQSAYDSKADIWSLGITAIEL 217
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 23 REISVLKELKHPNVIRLHDV----IPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAK 77
RE L HP ++ ++D P ++V E++ L+D + T P+ P A
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAI 119
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV- 136
+ +AL + H IIHRD+KP NI+I+ + A+K+ DFG++RA N T
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 137 --TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T Y PE G V + + D++S GC+ E+
Sbjct: 180 IGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEV 212
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 176 EALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV---TLWYR 232
+AL + H IIHRD+KP NI+I+ + A+K+ DFG++RA N T T Y
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
PE G V + + D++S GC+ E++T + F GDS + ++ R
Sbjct: 187 SPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLK-DFLQTTPVPVPPALAKSYLY 81
+EI+VL + P V + + D KL+++ E+L D L+ P P+ + L
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIATILR 111
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 141
++L+ L Y HS + IHRD+K N+L+++ G +KLADFG++ T + V T ++
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 171
Query: 142 PPEILLGAKVYSTTVDIWSAGCIFSEMS 169
PE+ + Y + DIWS G E++
Sbjct: 172 APEV-IKQSAYDSKADIWSLGITAIELA 198
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
L ++L+ L Y HS + IHRD+K N+L+++ G +KLADFG++ T + V T +
Sbjct: 110 LREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF 169
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEM 259
+ PE+ + Y + DIWS G E+
Sbjct: 170 WMAPEV-IKQSAYDSKADIWSLGITAIEL 197
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 23 REISVLKELKHPNVIRLHDV----IPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAK 77
RE L HP ++ ++D P ++V E++ L+D + T P+ P A
Sbjct: 78 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAI 136
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV- 136
+ +AL + H IIHRD+KP NI+I+ + A+K+ DFG++RA N T
Sbjct: 137 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 196
Query: 137 --TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T Y PE G V + + D++S GC+ E+
Sbjct: 197 IGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEV 229
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 176 EALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV---TLWYR 232
+AL + H IIHRD+KP NI+I+ + A+K+ DFG++RA N T T Y
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 203
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
PE G V + + D++S GC+ E++T + F GDS + ++ R
Sbjct: 204 SPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 250
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 32 KHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCH 91
HP ++ LH + +LF V E++ F +P A+ Y ++ AL Y H
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 92 SRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKV 151
R II+RDLK N+L++ G +KL D+G+ + P + + T Y PEIL G
Sbjct: 139 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED- 197
Query: 152 YSTTVDIWSAGCIFSEM 168
Y +VD W+ G + EM
Sbjct: 198 YGFSVDWWALGVLMFEM 214
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y ++ AL Y H R II+RDLK N+L++ G +KL D+G+ + P + + T
Sbjct: 126 YSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP 185
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLF 266
Y PEIL G Y +VD W+ G + EM+ ++ F
Sbjct: 186 NYIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 32 KHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCH 91
HP ++ LH + +LF V E++ F +P A+ Y ++ AL Y H
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 170
Query: 92 SRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKV 151
R II+RDLK N+L++ G +KL D+G+ + P + + T Y PEIL G
Sbjct: 171 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED- 229
Query: 152 YSTTVDIWSAGCIFSEM 168
Y +VD W+ G + EM
Sbjct: 230 YGFSVDWWALGVLMFEM 246
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y ++ AL Y H R II+RDLK N+L++ G +KL D+G+ + P + + T
Sbjct: 158 YSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP 217
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLF 266
Y PEIL G Y +VD W+ G + EM+ ++ F
Sbjct: 218 NYIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 32 KHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCH 91
HP ++ LH + +LF V E++ F +P A+ Y ++ AL Y H
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 92 SRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKV 151
R II+RDLK N+L++ G +KL D+G+ + P + + T Y PEIL G
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED- 182
Query: 152 YSTTVDIWSAGCIFSEM 168
Y +VD W+ G + EM
Sbjct: 183 YGFSVDWWALGVLMFEM 199
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y ++ AL Y H R II+RDLK N+L++ G +KL D+G+ + P + + T
Sbjct: 111 YSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP 170
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLF 266
Y PEIL G Y +VD W+ G + EM+ ++ F
Sbjct: 171 NYIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 32 KHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCH 91
HP ++ LH + +LF V E++ F +P A+ Y ++ AL Y H
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 92 SRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKV 151
R II+RDLK N+L++ G +KL D+G+ + P + + T Y PEIL G
Sbjct: 128 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED- 186
Query: 152 YSTTVDIWSAGCIFSEM 168
Y +VD W+ G + EM
Sbjct: 187 YGFSVDWWALGVLMFEM 203
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y ++ AL Y H R II+RDLK N+L++ G +KL D+G+ + P + + T
Sbjct: 115 YSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP 174
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLF 266
Y PEIL G Y +VD W+ G + EM+ ++ F
Sbjct: 175 NYIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 23 REISVLKELKHPNVIRLHDV----IPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAK 77
RE L HP ++ ++D P ++V E++ L+D + T P+ P A
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAI 119
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV- 136
+ +AL + H IIHRD+KP NILI+ + A+K+ DFG++RA N
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAV 179
Query: 137 --TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T Y PE G V + + D++S GC+ E+
Sbjct: 180 IGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEV 212
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 176 EALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV---TLWYR 232
+AL + H IIHRD+KP NILI+ + A+K+ DFG++RA N T Y
Sbjct: 127 QALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYL 186
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
PE G V + + D++S GC+ E++T + F GDS + ++ R
Sbjct: 187 SPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 81/180 (45%), Gaps = 28/180 (15%)
Query: 19 STALREISVLKELKHPNVIRLH-------------DVIPVDFKLFLVFEFLRQD-LKDFL 64
ST L E+ +L L H V+R + + LF+ E+ L D +
Sbjct: 47 STILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI 106
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLS--- 121
+ + Q+LEAL Y HS+ IIHRDLKP NI I++S +K+ DFGL+
Sbjct: 107 HSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
Query: 122 -RAFTI----------PMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSY 170
R+ I + T + T Y E+L G Y+ +D++S G IF EM Y
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 14/102 (13%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLS----RAFTI----------P 218
Q+LEAL Y HS+ IIHRDLKP NI I++S +K+ DFGL+ R+ I
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 219 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMI 260
+ T + T Y E+L G Y+ +D++S G IF EMI
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + L +++ + Y
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIG-SFDETCTRFYTA 139
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K S + D+W+ GCI +YQL+ L
Sbjct: 200 YVSPE-LLTEKSASKSSDLWALGCI------IYQLVAGL 231
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 32/176 (18%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE LL K S + D+W+ GCI +++ F +E + IF+
Sbjct: 197 TAQYVSPE-LLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQ------- 244
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
K+ + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 245 -------KIIKLEYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 282
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 82/180 (45%), Gaps = 28/180 (15%)
Query: 19 STALREISVLKELKHPNVIRLH-------------DVIPVDFKLFLVFEFL-RQDLKDFL 64
ST L E+ +L L H V+R + + LF+ E+ + L D +
Sbjct: 47 STILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLI 106
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLS--- 121
+ + Q+LEAL Y HS+ IIHRDLKP NI I++S +K+ DFGL+
Sbjct: 107 HSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
Query: 122 -RAFTI----------PMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSY 170
R+ I + T + T Y E+L G Y+ +D++S G IF EM Y
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 14/102 (13%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLS----RAFTI----------P 218
Q+LEAL Y HS+ IIHRDLKP NI I++S +K+ DFGL+ R+ I
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 219 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMI 260
+ T + T Y E+L G Y+ +D++S G IF EMI
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 176 EALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV---TLWYR 232
+AL + H IIHRD+KP NI+I+ + A+K+ DFG++RA N T T Y
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
PE G V + + D++S GC+ E++T + F GDS + ++ R
Sbjct: 187 SPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 23 REISVLKELKHPNVIRLHDV----IPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAK 77
RE L HP ++ ++ P ++V E++ L+D + T P+ P A
Sbjct: 61 REAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAI 119
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV- 136
+ +AL + H IIHRD+KP NI+I+ + A+K+ DFG++RA N T
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 137 --TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T Y PE G V + + D++S GC+ E+
Sbjct: 180 IGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEV 212
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQL 83
EIS+ + L H +V+ H + +F+V E R+ L + A+ YL Q+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 84 LEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPP 143
+ +Y H R+IHRDLK N+ +N+ +K+ DFGL+ R T Y P
Sbjct: 127 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 186
Query: 144 EILLGAKVYSTTVDIWSAGCIF 165
E+ L K +S VD+WS GCI
Sbjct: 187 EV-LSKKGHSFEVDVWSIGCIM 207
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 32/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
YL Q++ +Y H R+IHRDLK N+ +N+ +K+ DFGL+ R T
Sbjct: 122 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP 181
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PE+ L K +S VD+WS GCI ++ K F + RI +
Sbjct: 182 NYIAPEV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-------- 232
Query: 290 WPGVSKLPIYKTDFPEWR-PKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
E+ PK +P+A + K++ DP R + +L E+
Sbjct: 233 ---------------EYSIPKHI-------NPVAASLIQKMLQTDPTARPTINELLNDEF 270
Query: 349 F 349
F
Sbjct: 271 F 271
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 15 EGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPA 74
E + + REI + L+HPN++R +VI L +V E+
Sbjct: 56 EKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED 115
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA--LKLADFGLSRAFTIPMNRYT 132
A+ + QL+ + YCH+ ++ HRDLK +N L++ S A LK+ DFG S++ ++ ++
Sbjct: 116 EARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQPK 174
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM---SYLYQLLEALRYCHSRRIIHR 189
V T Y PE+LL + D+WS G M +Y ++ E + + R+ IHR
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPK--NFRKTIHR 232
Query: 190 DLKPQ 194
L Q
Sbjct: 233 ILNVQ 237
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 30/184 (16%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA--LKLADFGLSRAFTIPMNRYTHEVV 227
+ QL+ + YCH+ ++ HRDLK +N L++ S A LK+ DFG S++ ++ ++ V
Sbjct: 120 FFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQPKSTVG 178
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFR--IFRTLGTP 285
T Y PE+LL + D+WS G M+ F D E + FR I R L
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE-DPEEPKNFRKTIHRILNVQ 237
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
+ +P Y PE R + S+I DP +R+S I
Sbjct: 238 Y--------AIPDYVHISPECR----------------HLISRIFVADPAKRISIPEIRN 273
Query: 346 HEYF 349
HE+F
Sbjct: 274 HEWF 277
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQL 83
EIS+ + L H +V+ H + +F+V E R+ L + A+ YL Q+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 84 LEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPP 143
+ +Y H R+IHRDLK N+ +N+ +K+ DFGL+ R T Y P
Sbjct: 127 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 186
Query: 144 EILLGAKVYSTTVDIWSAGCIF 165
E+ L K +S VD+WS GCI
Sbjct: 187 EV-LSKKGHSFEVDVWSIGCIM 207
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 32/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
YL Q++ +Y H R+IHRDLK N+ +N+ +K+ DFGL+ R T
Sbjct: 122 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP 181
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PE+ L K +S VD+WS GCI ++ K F + RI +
Sbjct: 182 NYIAPEV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-------- 232
Query: 290 WPGVSKLPIYKTDFPEWR-PKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
E+ PK +P+A + K++ DP R + +L E+
Sbjct: 233 ---------------EYSIPKHI-------NPVAASLIQKMLQTDPTARPTINELLNDEF 270
Query: 349 F 349
F
Sbjct: 271 F 271
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 11 RVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPV 69
+V VE ++EIS++++ P+V++ + + L++V E+ + D ++
Sbjct: 61 QVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK 120
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN 129
+ + L L+ L Y H R IHRD+K NIL+N G KLADFG++ T M
Sbjct: 121 TLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMA 180
Query: 130 RYTHEVVTLWYRPPEIL--LGAKVYSTTVDIWSAGCIFSEMS 169
+ + T ++ PE++ +G Y+ DIWS G EM+
Sbjct: 181 KRNXVIGTPFWMAPEVIQEIG---YNCVADIWSLGITAIEMA 219
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 32/211 (15%)
Query: 148 GAKVYSTTVDIWSAGCIFSEMSYLYQ-LLEALRYCHSRRIIHRDLKPQNILINKSGALKL 206
GA S + + + E++ + Q L+ L Y H R IHRD+K NIL+N G KL
Sbjct: 107 GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKL 166
Query: 207 ADFGLSRAFTIPMNRYTHEVVTLWYRPPEIL--LGAKVYSTTVDIWSAGCIFSEMITKKT 264
ADFG++ T M + + T ++ PE++ +G Y+ DIWS G EM K
Sbjct: 167 ADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIG---YNCVADIWSLGITAIEMAEGKP 223
Query: 265 LFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVD 324
+A +I + IF P P K ++ +F D
Sbjct: 224 PYA---DIHPMRAIFMIPTNPP----PTFRKPELWSDNF-------------------TD 257
Query: 325 VFSKIMALDPKQRVSAKTILQHEYFNQVEMV 355
+ + P+QR +A +LQH + + V
Sbjct: 258 FVKQCLVKSPEQRATATQLLQHPFVRSAKGV 288
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQL 83
EIS+ + L H +V+ H + +F+V E R+ L + A+ YL Q+
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 130
Query: 84 LEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPP 143
+ +Y H R+IHRDLK N+ +N+ +K+ DFGL+ R T Y P
Sbjct: 131 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 190
Query: 144 EILLGAKVYSTTVDIWSAGCIF 165
E+ L K +S VD+WS GCI
Sbjct: 191 EV-LSKKGHSFEVDVWSIGCIM 211
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 32/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
YL Q++ +Y H R+IHRDLK N+ +N+ +K+ DFGL+ R T
Sbjct: 126 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP 185
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PE+ L K +S VD+WS GCI ++ K F + RI +
Sbjct: 186 NYIAPEV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-------- 236
Query: 290 WPGVSKLPIYKTDFPEWR-PKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
E+ PK +P+A + K++ DP R + +L E+
Sbjct: 237 ---------------EYSIPKHI-------NPVAASLIQKMLQTDPTARPTINELLNDEF 274
Query: 349 F 349
F
Sbjct: 275 F 275
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 17 VPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPAL 75
P +EI + K L H NV++ + +L E+ +L D ++ + +P
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPD 106
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE- 134
A+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRE 161
Query: 135 ------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 201
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 164
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 210
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 211 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 257
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 258 DIKKDRWYNK 267
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 137
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 198 YVSPE-LLTEKSACKSSDLWALGCI------IYQLVAGL 229
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE LL K + D+W+ GCI +++ F +E + IF+
Sbjct: 195 TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQ------- 242
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
K+ + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 243 -------KIIKLEYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 280
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 17 VPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPAL 75
P +EI + K L H NV++ + +L E+ +L D ++ + +P
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPD 105
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE- 134
A+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRE 160
Query: 135 ------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 163
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 209
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 210 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 257 DIKKDRWYNK 266
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 140
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 201 YVSPE-LLTEKSACKSSDLWALGCI------IYQLVAGL 232
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE LL K + D+W+ GCI +++ F +E + IF+
Sbjct: 198 TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQ------- 245
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
K+ + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 246 -------KIIKLEYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 283
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQL 83
EIS+ + L H +V+ H + +F+V E R+ L + A+ YL Q+
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 124
Query: 84 LEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPP 143
+ +Y H R+IHRDLK N+ +N+ +K+ DFGL+ R T Y P
Sbjct: 125 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 184
Query: 144 EILLGAKVYSTTVDIWSAGCIF 165
E+ L K +S VD+WS GCI
Sbjct: 185 EV-LSKKGHSFEVDVWSIGCIM 205
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 32/183 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
YL Q++ +Y H R+IHRDLK N+ +N+ +K+ DFGL+ R T
Sbjct: 120 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP 179
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PE+ L K +S VD+WS GCI ++ K F + RI +
Sbjct: 180 NYIAPEV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-------- 230
Query: 290 WPGVSKLPIYKTDFPEWR-PKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
E+ PK +P+A + K++ DP R + +L E+
Sbjct: 231 ---------------EYSIPKHI-------NPVAASLIQKMLQTDPTARPTINELLNDEF 268
Query: 349 FNQ 351
F
Sbjct: 269 FTS 271
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 140
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 201 YVSPE-LLTEKSACKSSDLWALGCI------IYQLVAGL 232
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE LL K + D+W+ GCI +++ F +E + IF+
Sbjct: 198 TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQ------- 245
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
K+ + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 246 -------KIIKLEYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 283
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 137
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 198 YVSPE-LLTEKSACKSSDLWALGCI------IYQLVAGL 229
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE LL K + D+W+ GCI +++ F +E + IF+
Sbjct: 195 TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQ------- 242
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
K+ + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 243 -------KIIKLEYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 280
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 137
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 198 YVSPE-LLTEKSACKSSDLWALGCI------IYQLVAGL 229
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE LL K + D+W+ GCI +++ F +E + IF+
Sbjct: 195 TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQ------- 242
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
K+ + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 243 -------KIIKLEYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 280
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 17 VPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPAL 75
P +EI + K L H NV++ + +L E+ +L D ++ + +P
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPD 106
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE- 134
A+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRE 161
Query: 135 ------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 201
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 164
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 210
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 211 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 257
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 258 DIKKDRWYNK 267
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 17 VPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPAL 75
P +EI + K L H NV++ + +L E+ +L D ++ + +P
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPD 106
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE- 134
A+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRE 161
Query: 135 ------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 201
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 164
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 210
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 211 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 257
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 258 DIKKDRWYNK 267
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 139
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 200 YVSPE-LLTEKSACKSSDLWALGCI------IYQLVAGL 231
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 34/177 (19%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLF-AGDSEIDQLFRIFRTLGTPH 286
T Y PE LL K + D+W+ GCI +++ F AG+ +
Sbjct: 197 TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL-------------- 241
Query: 287 EDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
++ + KL + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 242 --IFAKIIKL---EYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 282
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 17 VPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPAL 75
P +EI + K L H NV++ + +L E+ +L D ++ + +P
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPD 106
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE- 134
A+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRE 161
Query: 135 ------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 201
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 164
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 210
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 211 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 257
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 258 DIKKDRWYNK 267
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 139
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 200 YVSPE-LLTEKSACKSSDLWALGCI------IYQLVAGL 231
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE LL K + D+W+ GCI +++ F +E + IF+
Sbjct: 197 TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQ------- 244
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
K+ + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 245 -------KIIKLEYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 282
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 139
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 200 YVSPE-LLTEKSAXKSSDLWALGCI------IYQLVAGL 231
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 34/177 (19%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLF-AGDSEIDQLFRIFRTLGTPH 286
T Y PE LL K + D+W+ GCI +++ F AG+ +
Sbjct: 197 TAQYVSPE-LLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGL-------------- 241
Query: 287 EDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
++ + KL + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 242 --IFAKIIKL---EYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 282
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 76/146 (52%), Gaps = 5/146 (3%)
Query: 27 VLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLE 85
+LK +KHP ++ LH KL+ V +++ +L LQ + P A+ Y ++
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPR-ARFYAAEIAS 150
Query: 86 ALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV-TLWYRPPE 144
AL Y HS I++RDLKP+NIL++ G + L DFGL + I N T T Y PE
Sbjct: 151 ALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKE-NIEHNSTTSTFCGTPEYLAPE 209
Query: 145 ILLGAKVYSTTVDIWSAGCIFSEMSY 170
+ L + Y TVD W G + EM Y
Sbjct: 210 V-LHKQPYDRTVDWWCLGAVLYEMLY 234
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV-T 228
Y ++ AL Y HS I++RDLKP+NIL++ G + L DFGL + I N T T
Sbjct: 144 YAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKE-NIEHNSTTSTFCGT 202
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMI 260
Y PE+ L + Y TVD W G + EM+
Sbjct: 203 PEYLAPEV-LHKQPYDRTVDWWCLGAVLYEML 233
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 17 VPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPAL 75
P +EI + K L H NV++ + +L E+ +L D ++ + +P
Sbjct: 46 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPD 104
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE- 134
A+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 105 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRE 159
Query: 135 ------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 199
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 108 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 162
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 208
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 209 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 255
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 256 DIKKDRWYNK 265
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 139
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 200 YVSPE-LLTEKSACKSSDLWALGCI------IYQLVAGL 231
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE LL K + D+W+ GCI +++ F +E + IF+
Sbjct: 197 TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQ------- 244
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
K+ + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 245 -------KIIKLEYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 282
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 137
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQ 197
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 198 YVSPE-LLTEKSACKSSDLWALGCI------IYQLVAGL 229
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE LL K + D+W+ GCI +++ F +E + IF+
Sbjct: 195 TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQ------- 242
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
K+ + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 243 -------KIIKLEYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 280
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 84 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 142
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 143 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 203 YVSPE-LLTEKSACKSSDLWALGCI------IYQLVAGL 234
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 140 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSE 271
T Y PE LL K + D+W+ GCI +++ F +E
Sbjct: 200 TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 242
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 75/153 (49%), Gaps = 20/153 (13%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFE-------FLRQDLKDFLQTTPVPVPPAL 75
+EI ++K L HPN+IRL++ + ++LV E F R K + +
Sbjct: 55 QEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD------- 107
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYT 132
A + +L A+ YCH + HRDLKP+N L + LKL DFGL+ F P
Sbjct: 108 AARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK-PGKMMR 166
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
+V T +Y P++L G +Y D WSAG +
Sbjct: 167 TKVGTPYYVSPQVLEG--LYGPECDEWSAGVMM 197
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 112/269 (41%), Gaps = 50/269 (18%)
Query: 105 ILINKSGALKLADFGLSRAFTIPMNRYTHEV-VTLWYRPPEILLGAKVYSTTVDIW---- 159
I + K ++ A + + F ++R+ E+ + P I+ + + DI+
Sbjct: 27 IAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86
Query: 160 --SAGCIFSEMSY------------LYQLLEALRYCHSRRIIHRDLKPQNILI---NKSG 202
+ G +F + + + +L A+ YCH + HRDLKP+N L +
Sbjct: 87 LCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDS 146
Query: 203 ALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITK 262
LKL DFGL+ F P +V T +Y P++L G +Y D WSAG + ++
Sbjct: 147 PLKLIDFGLAARFK-PGKMMRTKVGTPYYVSPQVLEG--LYGPECDEWSAGVMMYVLLCG 203
Query: 263 KTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLA 322
F+ ++ + + +I T E W VS P A
Sbjct: 204 YPPFSAPTDXEVMLKIREGTFTFPEKDWLNVS-------------------------PQA 238
Query: 323 VDVFSKIMALDPKQRVSAKTILQHEYFNQ 351
+ +++ PKQR+++ L+HE+F +
Sbjct: 239 ESLIRRLLTKSPKQRITSLQALEHEWFEK 267
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 86 RERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 144
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 145 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 205 YVSPE-LLTEKSACKSSDLWALGCI------IYQLVAGL 236
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 142 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE LL K + D+W+ GCI +++ F +E + IF+
Sbjct: 202 TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQ------- 249
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
K+ + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 250 -------KIIKLEYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 287
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFL 64
+ R++ GV + RE+S+LKE++HPNVI LH+V + L+ E + +L DFL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A +L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL
Sbjct: 106 AEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ N + + T + PEI + + D+WS G I
Sbjct: 165 AHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 206
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTHE 225
+L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL+ N + +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNI 177
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
T + PEI+ + D+WS G I +++ + F GD++ + L + +
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYE 235
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
ED E + LA D +++ DPK+R++ + LQ
Sbjct: 236 FED------------------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 346 H 346
H
Sbjct: 272 H 272
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 139
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 200 YVSPE-LLTEKSACKSSDLWALGCI------IYQLVAGL 231
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE LL K + D+W+ GCI +++ F +E + IF+
Sbjct: 197 TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQ------- 244
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
K+ + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 245 -------KIIKLEYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 282
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 17 VPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPAL 75
P +EI + K L H NV++ + +L E+ +L D ++ + +P
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPD 105
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE- 134
A+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRE 160
Query: 135 ------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 163
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 209
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 210 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 257 DIKKDRWYNK 266
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 17 VPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPAL 75
P +EI + K L H NV++ + +L E+ +L D ++ + +P
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPD 105
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE- 134
A+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRE 160
Query: 135 ------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 163
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 209
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 210 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 257 DIKKDRWYNK 266
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 75/153 (49%), Gaps = 20/153 (13%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFE-------FLRQDLKDFLQTTPVPVPPAL 75
+EI ++K L HPN+IRL++ + ++LV E F R K + +
Sbjct: 72 QEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD------- 124
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYT 132
A + +L A+ YCH + HRDLKP+N L + LKL DFGL+ F P
Sbjct: 125 AARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK-PGKMMR 183
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
+V T +Y P++L G +Y D WSAG +
Sbjct: 184 TKVGTPYYVSPQVLEG--LYGPECDEWSAGVMM 214
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 112/269 (41%), Gaps = 50/269 (18%)
Query: 105 ILINKSGALKLADFGLSRAFTIPMNRYTHEV-VTLWYRPPEILLGAKVYSTTVDIW---- 159
I + K ++ A + + F ++R+ E+ + P I+ + + DI+
Sbjct: 44 IAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 103
Query: 160 --SAGCIFSEMSY------------LYQLLEALRYCHSRRIIHRDLKPQNILI---NKSG 202
+ G +F + + + +L A+ YCH + HRDLKP+N L +
Sbjct: 104 LCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDS 163
Query: 203 ALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITK 262
LKL DFGL+ F P +V T +Y P++L G +Y D WSAG + ++
Sbjct: 164 PLKLIDFGLAARFK-PGKMMRTKVGTPYYVSPQVLEG--LYGPECDEWSAGVMMYVLLCG 220
Query: 263 KTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLA 322
F+ ++ + + +I T E W VS P A
Sbjct: 221 YPPFSAPTDXEVMLKIREGTFTFPEKDWLNVS-------------------------PQA 255
Query: 323 VDVFSKIMALDPKQRVSAKTILQHEYFNQ 351
+ +++ PKQR+++ L+HE+F +
Sbjct: 256 ESLIRRLLTKSPKQRITSLQALEHEWFEK 284
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 78 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 136
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 197 YVSPE-LLTEKSACKSSDLWALGCI------IYQLVAGL 228
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 134 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE LL K + D+W+ GCI +++ F +E + IF+
Sbjct: 194 TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQ------- 241
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
K+ + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 242 -------KIIKLEYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 279
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 63 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 121
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 122 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 182 YVSPE-LLTEKSACKSSDLWALGCI------IYQLVAGL 213
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 119 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE LL K + D+W+ GCI +++ F +E + IF+
Sbjct: 179 TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQ------- 226
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
K+ + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 227 -------KIIKLEYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 264
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQL 83
EIS+ + L H +V+ H + +F+V E R+ L + A+ YL Q+
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 148
Query: 84 LEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPP 143
+ +Y H R+IHRDLK N+ +N+ +K+ DFGL+ R T Y P
Sbjct: 149 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 208
Query: 144 EILLGAKVYSTTVDIWSAGCIF 165
E+ L K +S VD+WS GCI
Sbjct: 209 EV-LSKKGHSFEVDVWSIGCIM 229
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 32/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
YL Q++ +Y H R+IHRDLK N+ +N+ +K+ DFGL+ R T
Sbjct: 144 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP 203
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PE+ L K +S VD+WS GCI ++ K F + RI +
Sbjct: 204 NYIAPEV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-------- 254
Query: 290 WPGVSKLPIYKTDFPEWR-PKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
E+ PK +P+A + K++ DP R + +L E+
Sbjct: 255 ---------------EYSIPKHI-------NPVAASLIQKMLQTDPTARPTINELLNDEF 292
Query: 349 F 349
F
Sbjct: 293 F 293
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 17 VPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPAL 75
P +EI + K L H NV++ + +L E+ +L D ++ + +P
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPD 105
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE- 134
A+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRE 160
Query: 135 ------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 163
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 209
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 210 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 257 DIKKDRWYNK 266
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVIPVDFKLFLVFEFLR--QDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D L+ E + QDL DF+ T + LA+S+
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFI-TERGALQEELARSF 119
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 177
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 207
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 118 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 175
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
T Y PPE + + + + +WS G + +M+ F D EI + FR
Sbjct: 176 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 228
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQL 83
EIS+ + L H +V+ H + +F+V E R+ L + A+ YL Q+
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 150
Query: 84 LEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPP 143
+ +Y H R+IHRDLK N+ +N+ +K+ DFGL+ R T Y P
Sbjct: 151 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 210
Query: 144 EILLGAKVYSTTVDIWSAGCIF 165
E+ L K +S VD+WS GCI
Sbjct: 211 EV-LSKKGHSFEVDVWSIGCIM 231
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 32/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
YL Q++ +Y H R+IHRDLK N+ +N+ +K+ DFGL+ R T
Sbjct: 146 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP 205
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PE+ L K +S VD+WS GCI ++ K F + RI +
Sbjct: 206 NYIAPEV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-------- 256
Query: 290 WPGVSKLPIYKTDFPEWR-PKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
E+ PK +P+A + K++ DP R + +L E+
Sbjct: 257 ---------------EYSIPKHI-------NPVAASLIQKMLQTDPTARPTINELLNDEF 294
Query: 349 F 349
F
Sbjct: 295 F 295
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 17 VPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPAL 75
P +EI + K L H NV++ + +L E+ +L D ++ + +P
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPD 106
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE- 134
A+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRE 161
Query: 135 ------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 201
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 164
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 210
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 211 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 257
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 258 DIKKDRWYNK 267
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 4/148 (2%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLK-DFLQTTPVPVPPALAKSYLY 81
+EI+VL + P + R KL+++ E+L D L+ P P+ + L
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLK--PGPLEETYIATILR 123
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 141
++L+ L Y HS R IHRD+K N+L+++ G +KLADFG++ T + V T ++
Sbjct: 124 EILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWM 183
Query: 142 PPEILLGAKVYSTTVDIWSAGCIFSEMS 169
PE+ + Y DIWS G E++
Sbjct: 184 APEV-IKQSAYDFKADIWSLGITAIELA 210
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
L ++L+ L Y HS R IHRD+K N+L+++ G +KLADFG++ T + V T +
Sbjct: 122 LREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPF 181
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEM 259
+ PE+ + Y DIWS G E+
Sbjct: 182 WMAPEV-IKQSAYDFKADIWSLGITAIEL 209
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 17 VPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPAL 75
P +EI + K L H NV++ + +L E+ +L D ++ + +P
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPD 105
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE- 134
A+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRE 160
Query: 135 ------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 163
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 209
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 210 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 257 DIKKDRWYNK 266
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 78 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 136
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 197 YVSPE-LLTEKSACKSSDLWALGCI------IYQLVAGL 228
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 134 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE LL K + D+W+ GCI +++ F +E + IF+
Sbjct: 194 TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQ------- 241
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
K+ + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 242 -------KIIKLEYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 279
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 84/155 (54%), Gaps = 15/155 (9%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQT---TPVPVPPALAK 77
L E +V+K L+H +++LH V+ + ++++ EF+ + L DFL++ + P+P +
Sbjct: 231 LAEANVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI-- 287
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----H 133
+ Q+ E + + R IHRDL+ NIL++ S K+ADFGL+R I N YT
Sbjct: 288 DFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR--VIEDNEYTAREGA 345
Query: 134 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ W P I G+ ++ D+WS G + E+
Sbjct: 346 KFPIKWTAPEAINFGS--FTIKSDVWSFGILLMEI 378
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ E + + R IHRDL+ NIL++ S K+ADFGL+R I N YT +
Sbjct: 292 QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR--VIEDNEYTAREGAKFPI 349
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
W P I G+ ++ D+WS G + E++T
Sbjct: 350 KWTAPEAINFGS--FTIKSDVWSFGILLMEIVT 380
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALA 76
P +EI + K L H NV++ + +L E+ +L D ++ + +P A
Sbjct: 48 PENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDA 106
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 134
+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRER 161
Query: 135 -----VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 163
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 209
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 210 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 257 DIKKDRWYNK 266
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 56 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 114
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 115 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 174
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 175 YVSPE-LLTEKSACKSSDLWALGCI------IYQLVAGL 206
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 112 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE LL K + D+W+ GCI +++ F +E + IF+
Sbjct: 172 TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQ------- 219
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
K+ + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 220 -------KIIKLEYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 257
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 57 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 115
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 116 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 175
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 176 YVSPE-LLTEKSACKSSDLWALGCI------IYQLVAGL 207
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 113 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE LL K + D+W+ GCI +++ F +E + IF+
Sbjct: 173 TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQ------- 220
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
K+ + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 221 -------KIIKLEYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 258
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 17 VPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPAL 75
P +EI + K L H NV++ + +L E+ +L D ++ + +P
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPD 105
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE- 134
A+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRE 160
Query: 135 ------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 163
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 209
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 210 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 257 DIKKDRWYNK 266
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 17 VPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPAL 75
P +EI + K L H NV++ + +L E+ +L D ++ + +P
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPD 105
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE- 134
A+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRE 160
Query: 135 ------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 163
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 209
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 210 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 257 DIKKDRWYNK 266
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 58 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 116
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 117 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 176
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 177 YVSPE-LLTEKSACKSSDLWALGCI------IYQLVAGL 208
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 114 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE LL K + D+W+ GCI +++ F +E + IF+
Sbjct: 174 TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQ------- 221
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
K+ + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 222 -------KIIKLEYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 259
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 84/155 (54%), Gaps = 15/155 (9%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQT---TPVPVPPALAK 77
L E +V+K L+H +++LH V+ + ++++ EF+ + L DFL++ + P+P +
Sbjct: 58 LAEANVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI-- 114
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----H 133
+ Q+ E + + R IHRDL+ NIL++ S K+ADFGL+R I N YT
Sbjct: 115 DFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR--VIEDNEYTAREGA 172
Query: 134 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ W P I G+ ++ D+WS G + E+
Sbjct: 173 KFPIKWTAPEAINFGS--FTIKSDVWSFGILLMEI 205
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT---- 223
+ + Q+ E + + R IHRDL+ NIL++ S K+ADFGL+R I N YT
Sbjct: 114 IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR--VIEDNEYTAREG 171
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ W P I G+ ++ D+WS G + E++T
Sbjct: 172 AKFPIKWTAPEAINFGS--FTIKSDVWSFGILLMEIVT 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE V+ L HP ++L+ D KL+ + + +L +++ + Y
Sbjct: 59 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTA 117
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVVTLW 139
+++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V T
Sbjct: 118 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 177
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
Y PE LL K + D+W+ GCI +YQL+ L
Sbjct: 178 YVSPE-LLTEKSACKSSDLWALGCI------IYQLVAGL 209
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT--IPMNRYTHEVV 227
Y +++ AL Y H + IIHRDLKP+NIL+N+ +++ DFG ++ + R V
Sbjct: 115 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
T Y PE LL K + D+W+ GCI +++ F +E + IF+
Sbjct: 175 TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQ------- 222
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
K+ + DFPE KF P A D+ K++ LD +R+ + +
Sbjct: 223 -------KIIKLEYDFPE----KFF-------PKARDLVEKLLVLDATKRLGCEEM 260
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALA 76
P +EI + K L H NV++ + +L E+ +L D ++ + +P A
Sbjct: 48 PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDA 106
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 134
+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRER 161
Query: 135 -----VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 163
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 209
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 210 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 257 DIKKDRWYNK 266
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFL 64
+ R++ GV + RE+S+LKE++HPNVI LH+V + L+ E + +L DFL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A +L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL
Sbjct: 106 AEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ N + + T + PEI + + D+WS G I
Sbjct: 165 AHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 206
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 31/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTHE 225
+L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL+ N + +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNI 177
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
T + PEI+ + D+WS G I +++ + F GD++
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTK-------------- 222
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
++ VS + E+ + FS LA D +++ DPK+R++ + LQ
Sbjct: 223 -QETLANVSAVNY------EFEDEYFSN----TSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 346 H 346
H
Sbjct: 272 H 272
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 17 VPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPAL 75
P +EI + K L H NV++ + +L E+ +L D ++ + +P
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPD 106
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE- 134
A+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRE 161
Query: 135 ------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 201
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 164
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 210
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 211 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 257
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 258 DIKKDRWYNK 267
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFL 64
+ R++ GV + RE+S+LKE++HPNVI LH+V + L+ E + +L DFL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A +L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL
Sbjct: 106 AEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ N + + T + PEI + + D+WS G I
Sbjct: 165 AHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 206
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 31/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTHE 225
+L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL+ N + +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNI 177
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
T + PEI+ + D+WS G I +++ + F GD++
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTK-------------- 222
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
++ VS + E+ + FS LA D +++ DPK+R++ + LQ
Sbjct: 223 -QETLANVSAVNY------EFEDEYFSN----TSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 346 H 346
H
Sbjct: 272 H 272
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFL 64
+ R++ GV + RE+S+LKE++HPNVI LH+V + L+ E + +L DFL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A +L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL
Sbjct: 106 AEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ N + + T + PEI + + D+WS G I
Sbjct: 165 AHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 206
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTHE 225
+L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL+ N + +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNI 177
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
T + PEI+ + D+WS G I +++ + F GD++ + L + +
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYE 235
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
ED E + LA D +++ DPK+R++ + LQ
Sbjct: 236 FED------------------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 346 H 346
H
Sbjct: 272 H 272
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFL 64
+ R++ GV + RE+S+LKE++HPNVI LH+V + L+ E + +L DFL
Sbjct: 45 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 104
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A +L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL
Sbjct: 105 AEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ N + + T + PEI + + D+WS G I
Sbjct: 164 AHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 205
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTHE 225
+L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL+ N + +
Sbjct: 118 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNI 176
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
T + PEI+ + D+WS G I +++ + F GD++ + L + +
Sbjct: 177 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYE 234
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
ED E + LA D +++ DPK+R++ + LQ
Sbjct: 235 FED------------------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270
Query: 346 H 346
H
Sbjct: 271 H 271
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFL 64
+ R++ GV + RE+S+LKE++HPNVI LH+V + L+ E + +L DFL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A +L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL
Sbjct: 106 AEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ N + + T + PEI + + D+WS G I
Sbjct: 165 AHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 206
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTHE 225
+L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL+ N + +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNI 177
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
T + PEI+ + D+WS G I +++ + F GD++ + L + +
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYE 235
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
ED E + LA D +++ DPK+R++ + LQ
Sbjct: 236 FED------------------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 346 H 346
H
Sbjct: 272 H 272
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFL 64
+ R++ GV + RE+S+LKE++HPNVI LH+V + L+ E + +L DFL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A +L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL
Sbjct: 106 AEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ N + + T + PEI + + D+WS G I
Sbjct: 165 AHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 206
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 31/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTHE 225
+L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL+ N + +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNI 177
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
T + PEI+ + D+WS G I +++ + F GD++
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTK-------------- 222
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
++ VS + E+ + FS LA D +++ DPK+R++ + LQ
Sbjct: 223 -QETLANVSAVNY------EFEDEYFSN----TSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 346 H 346
H
Sbjct: 272 H 272
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFL 64
+ R++ GV + RE+S+LKE++HPNVI LH+V + L+ E + +L DFL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A +L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL
Sbjct: 106 AEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ N + + T + PEI + + D+WS G I
Sbjct: 165 AHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 206
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTHE 225
+L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL+ N + +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNI 177
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
T + PEI+ + D+WS G I +++ + F GD++ + L + +
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYE 235
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
ED E + LA D +++ DPK+R++ + LQ
Sbjct: 236 FED------------------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 346 H 346
H
Sbjct: 272 H 272
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALA 76
P +EI + K L H NV++ + +L E+ +L D ++ + +P A
Sbjct: 48 PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDA 106
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 134
+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRER 161
Query: 135 -----VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 163
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 209
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P S ++ +W+ KK + D + + KI+ +P R++
Sbjct: 210 --------PSDS-----XQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 257 DIKKDRWYNK 266
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFL 64
+ R++ GV + RE+S+LKE++HPNVI LH+V + L+ E + +L DFL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A +L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL
Sbjct: 106 AEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ N + + T + PEI + + D+WS G I
Sbjct: 165 AHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 206
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTHE 225
+L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL+ N + +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNI 177
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
T + PEI+ + D+WS G I +++ + F GD++ + L + +
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYE 235
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
ED E + LA D +++ DPK+R++ + LQ
Sbjct: 236 FED------------------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 346 H 346
H
Sbjct: 272 H 272
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFL 64
+ R++ GV + RE+S+LKE++HPNVI LH+V + L+ E + +L DFL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A +L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL
Sbjct: 106 AEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ N + + T + PEI + + D+WS G I
Sbjct: 165 AHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 206
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTHE 225
+L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL+ N + +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNI 177
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
T + PEI+ + D+WS G I +++ + F GD++ + L + +
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYE 235
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
ED E + LA D +++ DPK+R++ + LQ
Sbjct: 236 FED------------------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 346 H 346
H
Sbjct: 272 H 272
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFL 64
+ R++ GV + RE+S+LKE++HPNVI LH+V + L+ E + +L DFL
Sbjct: 45 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 104
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A +L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL
Sbjct: 105 AEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ N + + T + PEI + + D+WS G I
Sbjct: 164 AHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 205
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTHE 225
+L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL+ N + +
Sbjct: 118 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNI 176
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
T + PEI+ + D+WS G I +++ + F GD++ + L + +
Sbjct: 177 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYE 234
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
ED E + LA D +++ DPK+R++ + LQ
Sbjct: 235 FED------------------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270
Query: 346 H 346
H
Sbjct: 271 H 271
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFL 64
+ R++ GV + RE+S+LKE++HPNVI LH+V + L+ E + +L DFL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A +L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL
Sbjct: 106 AEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ N + + T + PEI + + D+WS G I
Sbjct: 165 AHKIDFG-NEFKNIFGTPAFVAPEI-VNYEPLGLEADMWSIGVI 206
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTHE 225
+L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL+ N + +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNI 177
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
T + PEI+ + D+WS G I +++ + F GD++ + L + +
Sbjct: 178 FGTPAFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYE 235
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
ED E + LA D +++ DPK+R++ + LQ
Sbjct: 236 FED------------------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 346 H 346
H
Sbjct: 272 H 272
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALA 76
P +EI + K L H NV++ + +L E+ +L D ++ + +P A
Sbjct: 48 PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDA 106
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 134
+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRER 161
Query: 135 -----VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 163
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 209
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 210 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 257 DIKKDRWYNK 266
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALA 76
P +EI + K L H NV++ + +L E+ +L D ++ + +P A
Sbjct: 48 PENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDA 106
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 134
+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRER 161
Query: 135 -----VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 163
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 209
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 210 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 256
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 257 DIKKDRWYNK 266
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 40/208 (19%)
Query: 4 DESRPRSRVQVE-----GVPSTALR-EISVLKELKHPN------VIRLHDVIPVDFKLFL 51
D +R +S+V ++ G A R EI+VLK++K + + + D + +
Sbjct: 49 DHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCI 108
Query: 52 VFEFLRQDLKDFLQTT---PVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNIL-I 107
FE L ++ +FL+ P P+P + YQL ALR+ H ++ H DLKP+NIL +
Sbjct: 109 AFELLGKNTFEFLKENNFQPYPLPHV--RHMAYQLCHALRFLHENQLTHTDLKPENILFV 166
Query: 108 N------------------KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 149
N K+ ++++ADFG + T +T V T YRPPE++L
Sbjct: 167 NSEFETLYNEHKSCEEKSVKNTSIRVADFG---SATFDHEHHTTIVATRHYRPPEVILEL 223
Query: 150 KVYSTTVDIWSAGCIFSEMSYLYQLLEA 177
++ D+WS GCI E + L +
Sbjct: 224 G-WAQPCDVWSIGCILFEYYRGFTLFQT 250
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 38/212 (17%)
Query: 172 YQLLEALRYCHSRRIIHRDLKPQNIL-IN------------------KSGALKLADFGLS 212
YQL ALR+ H ++ H DLKP+NIL +N K+ ++++ADFG
Sbjct: 139 YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG-- 196
Query: 213 RAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
+ T +T V T YRPPE++L ++ D+WS GCI E TLF
Sbjct: 197 -SATFDHEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENR 254
Query: 273 DQLFRIFRTLG-TPHEDVWPGVSKLPIYKTDF-------------PEWRP-KKFSEILNL 317
+ L + + LG P + + YK +P K + +L
Sbjct: 255 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSL 314
Query: 318 PDPLAVDVFSKIMALDPKQRVSAKTILQHEYF 349
D+ +++ DP QR++ L H +F
Sbjct: 315 EHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALA 76
P +EI + K L H NV++ + +L E+ +L D ++ + +P A
Sbjct: 49 PENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDA 107
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 134
+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRER 162
Query: 135 -----VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 163 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 201
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 164
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 165 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 210
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 211 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 257
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 258 DIKKDRWYNK 267
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 33/221 (14%)
Query: 2 VSDESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVF 53
V DE P +RV ++ V A L E SV+KE +V+RL V+ ++
Sbjct: 44 VKDE--PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM 101
Query: 54 EFL-RQDLKDFL-------QTTPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQ 103
E + R DLK +L + PV PP+L+K ++ + + Y ++ + +HRDL +
Sbjct: 102 ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 161
Query: 104 NILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSA 161
N ++ + +K+ DFG++R T + ++ + + PE L V++T D+WS
Sbjct: 162 NCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDG-VFTTYSDVWSF 220
Query: 162 GCIFSEMSYL----YQLL---EALRYCHSRRIIHRDLKPQN 195
G + E++ L YQ L + LR+ ++ KP N
Sbjct: 221 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD---KPDN 258
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++ + +HRDL +N ++ + +K+ DFG++R T + ++ +
Sbjct: 140 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 199
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T D+WS G + E+ T
Sbjct: 200 WMSPESLKDG-VFTTYSDVWSFGVVLWEIAT 229
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
Query: 20 TALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKS 78
T EIS++ +L HP +I LHD +++ L+ EFL +L D + + A +
Sbjct: 94 TVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVIN 153
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILIN--KSGALKLADFGLSRAFTIPMNRYTHEVV 136
Y+ Q E L++ H I+H D+KP+NI+ K+ ++K+ DFGL+ P
Sbjct: 154 YMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN-PDEIVKVTTA 212
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCI 164
T + PEI+ V T D+W+ G +
Sbjct: 213 TAEFAAPEIVDREPVGFYT-DMWAIGVL 239
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 29/181 (16%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILIN--KSGALKLADFGLSRAFTIPMNRYTHE 225
++Y+ Q E L++ H I+H D+KP+NI+ K+ ++K+ DFGL+ P
Sbjct: 152 INYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN-PDEIVKVT 210
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
T + PEI+ V T D+W+ G + +++ + FAG+ +++ L + R
Sbjct: 211 TATAEFAAPEIVDREPVGFYT-DMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEF 269
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
ED + VS P A D ++ +P++R++ L+
Sbjct: 270 DEDAFSSVS-------------------------PEAKDFIKNLLQKEPRKRLTVHDALE 304
Query: 346 H 346
H
Sbjct: 305 H 305
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 8/185 (4%)
Query: 15 EGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPA 74
E + REI + L+HPN++R +VI L +V E+
Sbjct: 55 EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED 114
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA--LKLADFGLSRAFTIPMNRYT 132
A+ + QL+ + YCH+ ++ HRDLK +N L++ S A LK+ DFG S++ ++ ++
Sbjct: 115 EARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQPK 173
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM---SYLYQLLEALRYCHSRRIIHR 189
V T Y PE+LL + D+WS G M +Y ++ E + + R+ IHR
Sbjct: 174 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPK--NFRKTIHR 231
Query: 190 DLKPQ 194
L Q
Sbjct: 232 ILNVQ 236
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 30/184 (16%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA--LKLADFGLSRAFTIPMNRYTHEVV 227
+ QL+ + YCH+ ++ HRDLK +N L++ S A LK+ DFG S++ ++ ++ V
Sbjct: 119 FFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQPKSTVG 177
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFR--IFRTLGTP 285
T Y PE+LL + D+WS G M+ F D E + FR I R L
Sbjct: 178 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE-DPEEPKNFRKTIHRILNVQ 236
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
+ +P Y PE R + S+I DP +R+S I
Sbjct: 237 Y--------AIPDYVHISPECR----------------HLISRIFVADPAKRISIPEIRN 272
Query: 346 HEYF 349
HE+F
Sbjct: 273 HEWF 276
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 40/208 (19%)
Query: 4 DESRPRSRVQVE-----GVPSTALR-EISVLKELKHPN------VIRLHDVIPVDFKLFL 51
D +R +S+V ++ G A R EI+VLK++K + + + D + +
Sbjct: 72 DHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCI 131
Query: 52 VFEFLRQDLKDFLQTT---PVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNIL-I 107
FE L ++ +FL+ P P+P + YQL ALR+ H ++ H DLKP+NIL +
Sbjct: 132 AFELLGKNTFEFLKENNFQPYPLPHV--RHMAYQLCHALRFLHENQLTHTDLKPENILFV 189
Query: 108 N------------------KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 149
N K+ ++++ADFG + T +T V T YRPPE++L
Sbjct: 190 NSEFETLYNEHKSCEEKSVKNTSIRVADFG---SATFDHEHHTTIVATRHYRPPEVILEL 246
Query: 150 KVYSTTVDIWSAGCIFSEMSYLYQLLEA 177
++ D+WS GCI E + L +
Sbjct: 247 G-WAQPCDVWSIGCILFEYYRGFTLFQT 273
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 38/212 (17%)
Query: 172 YQLLEALRYCHSRRIIHRDLKPQNIL-IN------------------KSGALKLADFGLS 212
YQL ALR+ H ++ H DLKP+NIL +N K+ ++++ADFG
Sbjct: 162 YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG-- 219
Query: 213 RAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
+ T +T V T YRPPE++L ++ D+WS GCI E TLF
Sbjct: 220 -SATFDHEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENR 277
Query: 273 DQLFRIFRTLG-TPHEDVWPGVSKLPIYKTDF-------------PEWRP-KKFSEILNL 317
+ L + + LG P + + YK +P K + +L
Sbjct: 278 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSL 337
Query: 318 PDPLAVDVFSKIMALDPKQRVSAKTILQHEYF 349
D+ +++ DP QR++ L H +F
Sbjct: 338 EHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFL 64
+ R++ GV + RE+S+LKE++HPNVI LH+V + L+ E + +L DFL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A +L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL
Sbjct: 106 AEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ N + + T + PEI + + D+WS G I
Sbjct: 165 AHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 206
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTHE 225
+L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL+ N + +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNI 177
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
T + PEI+ + D+WS G I +++ + F GD++ + L + +
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYE 235
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
ED E + LA D +++ DPK+R++ + LQ
Sbjct: 236 FED------------------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 346 H 346
H
Sbjct: 272 H 272
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 36/206 (17%)
Query: 4 DESRPRSRVQVE-----GVPSTALR-EISVLKELKHPN------VIRLHDVIPVDFKLFL 51
D +R +S+V ++ G A R EI+VLK++K + + + D + +
Sbjct: 40 DHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCI 99
Query: 52 VFEFLRQDLKDFLQTTPV-PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNIL-IN- 108
FE L ++ +FL+ P P + YQL ALR+ H ++ H DLKP+NIL +N
Sbjct: 100 AFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNS 159
Query: 109 -----------------KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKV 151
K+ ++++ADFG + T +T V T YRPPE++L
Sbjct: 160 EFETLYNEHKSCEEKSVKNTSIRVADFG---SATFDHEHHTTIVATRHYRPPEVILELG- 215
Query: 152 YSTTVDIWSAGCIFSEMSYLYQLLEA 177
++ D+WS GCI E + L +
Sbjct: 216 WAQPCDVWSIGCILFEYYRGFTLFQT 241
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 38/212 (17%)
Query: 172 YQLLEALRYCHSRRIIHRDLKPQNIL-IN------------------KSGALKLADFGLS 212
YQL ALR+ H ++ H DLKP+NIL +N K+ ++++ADFG
Sbjct: 130 YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG-- 187
Query: 213 RAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
+ T +T V T YRPPE++L ++ D+WS GCI E TLF
Sbjct: 188 -SATFDHEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENR 245
Query: 273 DQLFRIFRTLG-TPHEDVWPGVSKLPIYKTDF-------------PEWRP-KKFSEILNL 317
+ L + + LG P + + YK +P K + +L
Sbjct: 246 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSL 305
Query: 318 PDPLAVDVFSKIMALDPKQRVSAKTILQHEYF 349
D+ +++ DP QR++ L H +F
Sbjct: 306 EHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFK--LFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
REI +LK L+H N+++ V + L L+ E+L L+D+LQ + Y
Sbjct: 63 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQY 122
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT-- 137
Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--VLPQDKEXXKVKEPG 180
Query: 138 ----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY PE L +K +S D+WS G + E+
Sbjct: 181 ESPIFWY-APESLTESK-FSVASDVWSFGVVLYEL 213
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Y Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 120 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--VLPQDKEXXKVK 177
Query: 228 T------LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L +K +S D+WS G + E+ T
Sbjct: 178 EPGESPIFWY-APESLTESK-FSVASDVWSFGVVLYELFT 215
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 115
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 116 FWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 173
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 203
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 114 SFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 171
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
T Y PPE + + + + +WS G + +M+ F D EI
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 10/154 (6%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V ++ ++V E++ +L D+L+ A+ Y+
Sbjct: 76 LKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYM 135
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT-- 137
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT
Sbjct: 136 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMT--GDTYTAHAGAKF 193
Query: 138 --LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
W P L +S D+W+ G + E++
Sbjct: 194 PIKWTAPES--LAYNTFSIKSDVWAFGVLLWEIA 225
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---- 228
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT
Sbjct: 138 QISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMT--GDTYTAHAGAKFPI 195
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
W P L +S D+W+ G + E+ T
Sbjct: 196 KWTAPES--LAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 82/146 (56%), Gaps = 4/146 (2%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYLYQ 82
E+ ++++ +H NV+ ++ V +L+++ EFL+ L D + + V + +
Sbjct: 92 EVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEA 149
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
+L+AL Y H++ +IHRD+K +IL+ G +KL+DFG + + + V T ++
Sbjct: 150 VLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMA 209
Query: 143 PEILLGAKVYSTTVDIWSAGCIFSEM 168
PE+ + +Y+T VDIWS G + EM
Sbjct: 210 PEV-ISRSLYATEVDIWSLGIMVIEM 234
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 27/178 (15%)
Query: 174 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 233
+L+AL Y H++ +IHRD+K +IL+ G +KL+DFG + + + V T ++
Sbjct: 150 VLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMA 209
Query: 234 PEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGV 293
PE+ + +Y+T VDIWS G + EM+ + + DS + + R+
Sbjct: 210 PEV-ISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL--------------- 253
Query: 294 SKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQ 351
D P + K ++ P+ D +++ DP++R +A+ +L H + Q
Sbjct: 254 -------RDSPPPKLKNSHKV----SPVLRDFLERMLVRDPQERATAQELLDHPFLLQ 300
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 33/221 (14%)
Query: 2 VSDESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVF 53
V DE P +RV ++ V A L E SV+KE +V+RL V+ ++
Sbjct: 35 VKDE--PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM 92
Query: 54 EFL-RQDLKDFL-------QTTPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQ 103
E + R DLK +L + PV PP+L+K ++ + + Y ++ + +HRDL +
Sbjct: 93 ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 152
Query: 104 NILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSA 161
N ++ + +K+ DFG++R T + ++ + + PE L V++T D+WS
Sbjct: 153 NCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDG-VFTTYSDVWSF 211
Query: 162 GCIFSEMSYL----YQLL---EALRYCHSRRIIHRDLKPQN 195
G + E++ L YQ L + LR+ ++ KP N
Sbjct: 212 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD---KPDN 249
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++ + +HRDL +N ++ + +K+ DFG++R T + ++ +
Sbjct: 131 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T D+WS G + E+ T
Sbjct: 191 WMSPESLKDG-VFTTYSDVWSFGVVLWEIAT 220
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 72/142 (50%), Gaps = 3/142 (2%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQ 82
REI + L+HPN++R +VI L ++ E+ A+ + Q
Sbjct: 65 REIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQ 124
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGA--LKLADFGLSRAFTIPMNRYTHEVVTLWY 140
LL + YCHS +I HRDLK +N L++ S A LK+ DFG S++ ++ ++ V T Y
Sbjct: 125 LLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQPKSTVGTPAY 183
Query: 141 RPPEILLGAKVYSTTVDIWSAG 162
PE+LL + D+WS G
Sbjct: 184 IAPEVLLRQEYDGKIADVWSCG 205
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 97/228 (42%), Gaps = 48/228 (21%)
Query: 132 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS---YLYQLLEALRYCHSRRIIH 188
TH + + Y G ++Y I +AG FSE + QLL + YCHS +I H
Sbjct: 89 THLAIIMEYAS-----GGELYER---ICNAG-RFSEDEARFFFQQLLSGVSYCHSMQICH 139
Query: 189 RDLKPQNILINKSGA--LKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTT 246
RDLK +N L++ S A LK+ DFG S++ ++ ++ V T Y PE+LL +
Sbjct: 140 RDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLLRQEYDGKI 198
Query: 247 VDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEW 306
D+WS G +T + G P ED P D+ +
Sbjct: 199 ADVWSCG------VTLYVMLVG--------------AYPFED--------PEEPRDYRKT 230
Query: 307 RPKKFSEILNLPD-----PLAVDVFSKIMALDPKQRVSAKTILQHEYF 349
+ S ++PD P + S+I DP R+S I H +F
Sbjct: 231 IQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFK--LFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
REI +LK L+H N+++ V + L L+ E+L L+D+LQ + Y
Sbjct: 67 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 126
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT-- 137
Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 127 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--VLPQDKEXXKVKEPG 184
Query: 138 ----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY PE L +K +S D+WS G + E+
Sbjct: 185 ESPIFWY-APESLTESK-FSVASDVWSFGVVLYEL 217
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Y Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 124 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--VLPQDKEXXKVK 181
Query: 228 T------LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L +K +S D+WS G + E+ T
Sbjct: 182 EPGESPIFWY-APESLTESK-FSVASDVWSFGVVLYELFT 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFK--LFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
REI +LK L+H N+++ V + L L+ E+L L+D+LQ + Y
Sbjct: 63 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 122
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT-- 137
Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVKEPG 180
Query: 138 ----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY PE L +K +S D+WS G + E+
Sbjct: 181 ESPIFWY-APESLTESK-FSVASDVWSFGVVLYEL 213
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Y Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 120 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVK 177
Query: 228 T------LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L +K +S D+WS G + E+ T
Sbjct: 178 EPGESPIFWY-APESLTESK-FSVASDVWSFGVVLYELFT 215
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT-- 137
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKF 174
Query: 138 -LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ + PE L K +S D+W+ G + E++
Sbjct: 175 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIA 206
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 229
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPI 176
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L K +S D+W+ G + E+ T
Sbjct: 177 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIAT 207
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFK--LFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
REI +LK L+H N+++ V + L L+ E+L L+D+LQ + Y
Sbjct: 91 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 150
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT-- 137
Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 151 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVKEPG 208
Query: 138 ----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY PE L +K +S D+WS G + E+
Sbjct: 209 ESPIFWY-APESLTESK-FSVASDVWSFGVVLYEL 241
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Y Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 148 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVK 205
Query: 228 T------LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L +K +S D+WS G + E+ T
Sbjct: 206 EPGESPIFWY-APESLTESK-FSVASDVWSFGVVLYELFT 243
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFK--LFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
REI +LK L+H N+++ V + L L+ E+L L+D+LQ + Y
Sbjct: 78 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 137
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT-- 137
Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 138 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVKEPG 195
Query: 138 ----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY PE L +K +S D+WS G + E+
Sbjct: 196 ESPIFWY-APESLTESK-FSVASDVWSFGVVLYEL 228
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Y Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 135 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVK 192
Query: 228 T------LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L +K +S D+WS G + E+ T
Sbjct: 193 EPGESPIFWY-APESLTESK-FSVASDVWSFGVVLYELFT 230
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFK--LFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
REI +LK L+H N+++ V + L L+ E+L L+D+LQ + Y
Sbjct: 66 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 125
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT-- 137
Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 126 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--VLPQDKEXXKVKEPG 183
Query: 138 ----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY PE L +K +S D+WS G + E+
Sbjct: 184 ESPIFWY-APESLTESK-FSVASDVWSFGVVLYEL 216
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Y Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 123 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--VLPQDKEXXKVK 180
Query: 228 T------LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L +K +S D+WS G + E+ T
Sbjct: 181 EPGESPIFWY-APESLTESK-FSVASDVWSFGVVLYELFT 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFK--LFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
REI +LK L+H N+++ V + L L+ E+L L+D+LQ + Y
Sbjct: 65 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 124
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT-- 137
Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 125 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--VLPQDKEXXKVKEPG 182
Query: 138 ----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY PE L +K +S D+WS G + E+
Sbjct: 183 ESPIFWY-APESLTESK-FSVASDVWSFGVVLYEL 215
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Y Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 122 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--VLPQDKEXXKVK 179
Query: 228 T------LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L +K +S D+WS G + E+ T
Sbjct: 180 EPGESPIFWY-APESLTESK-FSVASDVWSFGVVLYELFT 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFK--LFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
REI +LK L+H N+++ V + L L+ E+L L+D+LQ + Y
Sbjct: 60 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 119
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT-- 137
Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVKEPG 177
Query: 138 ----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY PE L +K +S D+WS G + E+
Sbjct: 178 ESPIFWY-APESLTESK-FSVASDVWSFGVVLYEL 210
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Y Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 117 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVK 174
Query: 228 T------LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L +K +S D+WS G + E+ T
Sbjct: 175 EPGESPIFWY-APESLTESK-FSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFK--LFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
REI +LK L+H N+++ V + L L+ E+L L+D+LQ + Y
Sbjct: 78 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 137
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT-- 137
Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 138 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVKEPG 195
Query: 138 ----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY PE L +K +S D+WS G + E+
Sbjct: 196 ESPIFWY-APESLTESK-FSVASDVWSFGVVLYEL 228
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Y Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 135 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVK 192
Query: 228 T------LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L +K +S D+WS G + E+ T
Sbjct: 193 EPGESPIFWY-APESLTESK-FSVASDVWSFGVVLYELFT 230
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKF 174
Query: 140 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ PE L K +S D+W+ G + E++
Sbjct: 175 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIA 206
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW-- 230
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPI 176
Query: 231 -YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L K +S D+W+ G + E+ T
Sbjct: 177 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIAT 207
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFK--LFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
REI +LK L+H N+++ V + L L+ E+L L+D+LQ + Y
Sbjct: 60 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 119
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT-- 137
Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVKEPG 177
Query: 138 ----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY PE L +K +S D+WS G + E+
Sbjct: 178 ESPIFWY-APESLTESK-FSVASDVWSFGVVLYEL 210
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Y Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 117 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVK 174
Query: 228 T------LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L +K +S D+WS G + E+ T
Sbjct: 175 EPGESPIFWY-APESLTESK-FSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFK--LFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
REI +LK L+H N+++ V + L L+ E+L L+D+LQ + Y
Sbjct: 58 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 117
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT-- 137
Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 118 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVKEPG 175
Query: 138 ----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY PE L +K +S D+WS G + E+
Sbjct: 176 ESPIFWY-APESLTESK-FSVASDVWSFGVVLYEL 208
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Y Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 115 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVK 172
Query: 228 T------LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L +K +S D+WS G + E+ T
Sbjct: 173 EPGESPIFWY-APESLTESK-FSVASDVWSFGVVLYELFT 210
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 120
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 178
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 208
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 119 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 176
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
T Y PPE + + + + +WS G + +M+ F D EI + FR
Sbjct: 177 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 229
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 120
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 178
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 208
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 119 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 176
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
T Y PPE + + + + +WS G + +M+ F D EI + FR
Sbjct: 177 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 229
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 60 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 118
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 119 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 176
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 177 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 206
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 117 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 174
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
T Y PPE + + + + +WS G + +M+ F D EI
Sbjct: 175 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 219
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFK--LFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
REI +LK L+H N+++ V + L L+ E+L L+D+LQ + Y
Sbjct: 59 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 118
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT-- 137
Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 119 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVKEPG 176
Query: 138 ----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY PE L +K +S D+WS G + E+
Sbjct: 177 ESPIFWY-APESLTESK-FSVASDVWSFGVVLYEL 209
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Y Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 116 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVK 173
Query: 228 T------LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L +K +S D+WS G + E+ T
Sbjct: 174 EPGESPIFWY-APESLTESK-FSVASDVWSFGVVLYELFT 211
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 12 VQVEGVPSTALR-EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPV 69
V+V+G ++ EIS+L +H N++ LH+ +L ++FEF+ D+ + + T+
Sbjct: 38 VKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAF 97
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILIN--KSGALKLADFGLSRAFTIP 127
+ SY++Q+ EAL++ HS I H D++P+NI+ +S +K+ +FG +R P
Sbjct: 98 ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK-P 156
Query: 128 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ + Y PE+ V ST D+WS G +
Sbjct: 157 GDNFRLLFTAPEYYAPEV-HQHDVVSTATDMWSLGTL 192
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 29/186 (15%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILIN--KSGALKLADFGLSRAFTIPMNRYTHE 225
+SY++Q+ EAL++ HS I H D++P+NI+ +S +K+ +FG +R P + +
Sbjct: 105 VSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK-PGDNFRLL 163
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
Y PE+ V ST D+WS G + +++ F ++ + I T
Sbjct: 164 FTAPEYYAPEV-HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF 222
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
E+ + +S A+D +++ + K R++A LQ
Sbjct: 223 DEEAFKEIS-------------------------IEAMDFVDRLLVKERKSRMTASEALQ 257
Query: 346 HEYFNQ 351
H + Q
Sbjct: 258 HPWLKQ 263
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFL 64
+ R++ GV + RE+S+LKE++HPNVI LH+V + L+ E + +L DFL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL 105
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A +L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL
Sbjct: 106 AEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ N + + T + PEI + + D+WS G I
Sbjct: 165 AHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 206
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTHE 225
+L Q+L + Y HS +I H DLKP+NI++ +K+ DFGL+ N + +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNI 177
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTP 285
T + PEI+ + D+WS G I +++ + F GD++ + L + +
Sbjct: 178 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYE 235
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
ED E + LA D +++ DPK+R++ + LQ
Sbjct: 236 FED------------------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 346 H 346
H
Sbjct: 272 H 272
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 119
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 177
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 207
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 118 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 175
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
T Y PPE + + + + +WS G + +M+ F D EI + FR
Sbjct: 176 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 228
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 115
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 116 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 173
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 203
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 114 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 171
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
T Y PPE + + + + +WS G + +M+ F D EI
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFK--LFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
REI +LK L+H N+++ V + L L+ E+L L+D+LQ + Y
Sbjct: 64 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 123
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT-- 137
Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 124 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVKEPG 181
Query: 138 ----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY PE L +K +S D+WS G + E+
Sbjct: 182 ESPIFWY-APESLTESK-FSVASDVWSFGVVLYEL 214
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Y Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 121 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVK 178
Query: 228 T------LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L +K +S D+WS G + E+ T
Sbjct: 179 EPGESPIFWY-APESLTESK-FSVASDVWSFGVVLYELFT 216
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 115
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 116 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 173
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 203
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 114 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 171
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
T Y PPE + + + + +WS G + +M+ F D EI + FR
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 224
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 135
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 193
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 223
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 134 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 191
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
T Y PPE + + + + +WS G + +M+ F D EI + FR
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 244
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 120
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 178
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 208
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 119 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 176
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
T Y PPE + + + + +WS G + +M+ F D EI + FR
Sbjct: 177 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 229
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 134
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 192
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 222
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 133 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 190
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
T Y PPE + + + + +WS G + +M+ F D EI + FR
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 243
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 142
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 143 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 200
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 201 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 230
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 141 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 198
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
T Y PPE + + + + +WS G + +M+ F D EI + FR
Sbjct: 199 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 251
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 135
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 193
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 223
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 134 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 191
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
T Y PPE + + + + +WS G + +M+ F D EI + FR
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 244
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 23 REISVLKELKHPNVIRLHDVI--PVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSY 79
REI +LK L +++ V P L LV E+L L+DFLQ + + Y
Sbjct: 60 REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 119
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEV 135
Q+ + + Y SRR +HRDL +NIL+ +K+ADFGL++ + + Y +
Sbjct: 120 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 179
Query: 136 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY P L ++S D+WS G + E+
Sbjct: 180 PIFWYAPES--LSDNIFSRQSDVWSFGVVLYEL 210
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HE 225
Y Q+ + + Y SRR +HRDL +NIL+ +K+ADFGL++ + + Y +
Sbjct: 119 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 178
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY P L ++S D+WS G + E+ T
Sbjct: 179 SPIFWYAPES--LSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKF 179
Query: 140 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ PE L K +S D+W+ G + E++
Sbjct: 180 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIA 211
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW-- 230
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPI 181
Query: 231 -YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L K +S D+W+ G + E+ T
Sbjct: 182 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIAT 212
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 8/185 (4%)
Query: 15 EGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPA 74
E + REI + L+HPN++R +VI L +V E+
Sbjct: 56 EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED 115
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA--LKLADFGLSRAFTIPMNRYT 132
A+ + QL+ + Y H+ ++ HRDLK +N L++ S A LK+ADFG S+A ++ ++
Sbjct: 116 EARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA-SVLHSQPK 174
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM---SYLYQLLEALRYCHSRRIIHR 189
V T Y PE+LL + D+WS G M +Y ++ E + + R+ IHR
Sbjct: 175 SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPK--NFRKTIHR 232
Query: 190 DLKPQ 194
L Q
Sbjct: 233 ILNVQ 237
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 83/184 (45%), Gaps = 30/184 (16%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA--LKLADFGLSRAFTIPMNRYTHEVV 227
+ QL+ + Y H+ ++ HRDLK +N L++ S A LK+ADFG S+A ++ ++ V
Sbjct: 120 FFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA-SVLHSQPKSAVG 178
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFR--IFRTLGTP 285
T Y PE+LL + D+WS G M+ F D E + FR I R L
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE-DPEEPKNFRKTIHRILNVQ 237
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
+ +P Y PE R + S+I DP +R+S I
Sbjct: 238 Y--------AIPDYVHISPECR----------------HLISRIFVADPAKRISIPEIRN 273
Query: 346 HEYF 349
HE+F
Sbjct: 274 HEWF 277
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 162
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 220
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 250
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 161 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 218
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
T Y PPE + + + + +WS G + +M+ F D EI + FR
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 271
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFK--LFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
REI +LK L+H N+++ V + L L+ EFL L+++LQ + Y
Sbjct: 63 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQY 122
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT-- 137
Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVKEPG 180
Query: 138 ----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY PE L +K +S D+WS G + E+
Sbjct: 181 ESPIFWY-APESLTESK-FSVASDVWSFGVVLYEL 213
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Y Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 120 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEXXKVK 177
Query: 228 T------LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L +K +S D+WS G + E+ T
Sbjct: 178 EPGESPIFWY-APESLTESK-FSVASDVWSFGVVLYELFT 215
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 148
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 206
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 236
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 147 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 204
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
T Y PPE + + + + +WS G + +M+ F D EI
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 147
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 205
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 235
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 146 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 203
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
T Y PPE + + + + +WS G + +M+ F D EI
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 148
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 206
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 236
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 147 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 204
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
T Y PPE + + + + +WS G + +M+ F D EI
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 147
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 205
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 235
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 146 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 203
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
T Y PPE + + + + +WS G + +M+ F D EI
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 23 REISVLKELKHPNVIRLHDVI--PVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSY 79
REI +LK L +++ V P L LV E+L L+DFLQ + + Y
Sbjct: 73 REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 132
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEV 135
Q+ + + Y SRR +HRDL +NIL+ +K+ADFGL++ + + Y +
Sbjct: 133 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 192
Query: 136 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY P L ++S D+WS G + E+
Sbjct: 193 PIFWYAPES--LSDNIFSRQSDVWSFGVVLYEL 223
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HE 225
Y Q+ + + Y SRR +HRDL +NIL+ +K+ADFGL++ + + Y +
Sbjct: 132 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 191
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY P L ++S D+WS G + E+ T
Sbjct: 192 SPIFWYAPES--LSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 134
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 192
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 222
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 133 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 190
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
T Y PPE + + + + +WS G + +M+ F D EI + FR
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 243
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 148
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 206
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 236
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 147 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 204
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
T Y PPE + + + + +WS G + +M+ F D EI
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 147
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 205
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 235
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 146 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 203
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
T Y PPE + + + + +WS G + +M+ F D EI + FR
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 256
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFK--LFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
+EI +L+ L H N+++ + D + L+ EFL LK++L + Y
Sbjct: 72 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY 131
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEV 135
Q+ + + Y SR+ +HRDL +N+L+ +K+ DFGL++A T +
Sbjct: 132 AVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDS 191
Query: 136 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRYCHS 183
WY PE L+ +K Y + D+WS G E+ L YC S
Sbjct: 192 PVFWY-APECLMQSKFYIAS-DVWSFGVTLHEL---------LTYCDS 228
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 167 EMSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT--- 223
++ Y Q+ + + Y SR+ +HRDL +N+L+ +K+ DFGL++A T
Sbjct: 128 QLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKD 187
Query: 224 -HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ WY PE L+ +K Y + D+WS G E++T
Sbjct: 188 DRDSPVFWY-APECLMQSKFYIAS-DVWSFGVTLHELLT 224
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 23 REISVLKELKHPNVIRLHDVI--PVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSY 79
REI +LK L +++ V P L LV E+L L+DFLQ + + Y
Sbjct: 61 REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 120
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEV 135
Q+ + + Y SRR +HRDL +NIL+ +K+ADFGL++ + + Y +
Sbjct: 121 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 180
Query: 136 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY P L ++S D+WS G + E+
Sbjct: 181 PIFWYAPES--LSDNIFSRQSDVWSFGVVLYEL 211
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HE 225
Y Q+ + + Y SRR +HRDL +NIL+ +K+ADFGL++ + + Y +
Sbjct: 120 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 179
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY P L ++S D+WS G + E+ T
Sbjct: 180 SPIFWYAPES--LSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKF 174
Query: 140 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ PE L K +S D+W+ G + E++
Sbjct: 175 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIA 206
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW-- 230
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPI 176
Query: 231 -YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L K +S D+W+ G + E+ T
Sbjct: 177 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIAT 207
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 148
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 206
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 236
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 147 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 204
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
T Y PPE + + + + +WS G + +M+ F D EI
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 96 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 154
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 212
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 213 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 242
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 153 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 210
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
T Y PPE + + + + +WS G + +M+ F D EI + FR
Sbjct: 211 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 263
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 135
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 193
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 223
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 134 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 191
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
T Y PPE + + + + +WS G + +M+ F D EI + FR
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 244
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 147
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 205
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 235
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 146 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 203
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
T Y PPE + + + + +WS G + +M+ F D EI
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 33/221 (14%)
Query: 2 VSDESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVF 53
V DE P +RV ++ V A L E SV+KE +V+RL V+ ++
Sbjct: 37 VKDE--PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM 94
Query: 54 EFL-RQDLKDFL-------QTTPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQ 103
E + R DLK +L + PV PP+L+K ++ + + Y ++ + +HRDL +
Sbjct: 95 ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 154
Query: 104 NILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSA 161
N ++ + +K+ DFG++R T + ++ + + PE L V++T D+WS
Sbjct: 155 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG-VFTTYSDVWSF 213
Query: 162 GCIFSEMSYL----YQLL---EALRYCHSRRIIHRDLKPQN 195
G + E++ L YQ L + LR+ ++ KP N
Sbjct: 214 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD---KPDN 251
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++ + +HRDL +N ++ + +K+ DFG++R T + ++ +
Sbjct: 133 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T D+WS G + E+ T
Sbjct: 193 WMSPESLKDG-VFTTYSDVWSFGVVLWEIAT 222
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 21/173 (12%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 121
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKF 179
Query: 140 ---YRPPEILLGAKVYSTTVDIWSAGCIFSE-------------MSYLYQLLE 176
+ PE L K +S D+W+ G + E +S +Y+LLE
Sbjct: 180 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 231
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW-- 230
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPI 181
Query: 231 -YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L K +S D+W+ G + E+ T
Sbjct: 182 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIAT 212
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 162
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 220
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 250
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 161 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 218
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
T Y PPE + + + + +WS G + +M+ F D EI + FR
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 271
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQ 82
EI VL L HPN+I+L ++ ++ LV E + +L D + A + + Q
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADA-VKQ 156
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINK---SGALKLADFGLSRAFTIPMNRYTHEVV--- 136
+LEA+ Y H I+HRDLKP+N+L LK+ADFGLS+ H+V+
Sbjct: 157 ILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV-------EHQVLMKT 209
Query: 137 ---TLWYRPPEILLGAKVYSTTVDIWSAGCI 164
T Y PEIL G Y VD+WS G I
Sbjct: 210 VCGTPGYCAPEILRGC-AYGPEVDMWSVGII 239
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 84/184 (45%), Gaps = 43/184 (23%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINK---SGALKLADFGLSRAFTIPMNRYTHEVV-- 227
Q+LEA+ Y H I+HRDLKP+N+L LK+ADFGLS+ H+V+
Sbjct: 156 QILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV-------EHQVLMK 208
Query: 228 ----TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLG 283
T Y PEIL G Y VD+WS G I ++ F D DQ F R L
Sbjct: 209 TVCGTPGYCAPEILRGC-AYGPEVDMWSVGIITYILLCGFEPFY-DERGDQ-FMFRRILN 265
Query: 284 TPHEDVWPGVSKLPIYKTDFPEWRPKKFSEI-LNLPDPLAVDVFSKIMALDPKQRVSAKT 342
+ + P W + E+ LN A D+ K++ LDPK+R++
Sbjct: 266 CEYYFISP--------------W----WDEVSLN-----AKDLVRKLIVLDPKKRLTTFQ 302
Query: 343 ILQH 346
LQH
Sbjct: 303 ALQH 306
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 109 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 167
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 225
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 226 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 255
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 166 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 223
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
T Y PPE + + + + +WS G + +M+ F D EI + FR
Sbjct: 224 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 276
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 33/221 (14%)
Query: 2 VSDESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVF 53
V DE P +RV ++ V A L E SV+KE +V+RL V+ ++
Sbjct: 44 VKDE--PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM 101
Query: 54 EFL-RQDLKDFL-------QTTPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQ 103
E + R DLK +L + PV PP+L+K ++ + + Y ++ + +HRDL +
Sbjct: 102 ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 161
Query: 104 NILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSA 161
N ++ + +K+ DFG++R T + ++ + + PE L V++T D+WS
Sbjct: 162 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG-VFTTYSDVWSF 220
Query: 162 GCIFSEMSYL----YQLL---EALRYCHSRRIIHRDLKPQN 195
G + E++ L YQ L + LR+ ++ KP N
Sbjct: 221 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD---KPDN 258
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++ + +HRDL +N ++ + +K+ DFG++R T + ++ +
Sbjct: 140 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 199
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T D+WS G + E+ T
Sbjct: 200 WMSPESLKDG-VFTTYSDVWSFGVVLWEIAT 229
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 24 EISVLKELKH--PNVIRLHDVI--PVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSY 79
E+ +LK++ VIRL D P F L L QDL DF+ T + LA+S+
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSF 162
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
+Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT T
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTR 220
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
Y PPE + + + + +WS G + +M
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDM 250
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
S+ +Q+LEA+R+CH+ ++HRD+K +NILI+ G LKL DFG + YT
Sbjct: 161 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDG 218
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
T Y PPE + + + + +WS G + +M+ F D EI + FR
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 271
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKF 174
Query: 140 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ PE L K +S D+W+ G + E++
Sbjct: 175 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIA 206
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW-- 230
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPI 176
Query: 231 -YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L K +S D+W+ G + E+ T
Sbjct: 177 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIAT 207
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFK--LFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
REI +LK L+H N+++ V + L L+ E+L L+D+LQ + Y
Sbjct: 60 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 119
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT-- 137
Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEFFKVKEPG 177
Query: 138 ----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY PE L +K +S D+WS G + E+
Sbjct: 178 ESPIFWY-APESLTESK-FSVASDVWSFGVVLYEL 210
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Y Q+ + + Y ++R IHRDL +NIL+ +K+ DFGL++ +P ++ +V
Sbjct: 117 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV--LPQDKEFFKVK 174
Query: 228 T------LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L +K +S D+WS G + E+ T
Sbjct: 175 EPGESPIFWY-APESLTESK-FSVASDVWSFGVVLYELFT 212
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 4/151 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI-PMNRYTHEVVTL 138
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + +
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 174
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ PE L K +S D+W+ G + E++
Sbjct: 175 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIA 204
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI-PMNRYTHEVVTLWY 231
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + + +
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 176
Query: 232 RPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
PE L K +S D+W+ G + E+ T
Sbjct: 177 TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 205
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 77/142 (54%), Gaps = 4/142 (2%)
Query: 27 VLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEA 86
+L + HP +IR+ ++F++ +++ L P +AK Y ++ A
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA 118
Query: 87 LRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEIL 146
L Y HS+ II+RDLKP+NIL++K+G +K+ DFG ++ +P Y T Y PE+
Sbjct: 119 LEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKY--VPDVTYXL-CGTPDYIAPEV- 174
Query: 147 LGAKVYSTTVDIWSAGCIFSEM 168
+ K Y+ ++D WS G + EM
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEM 196
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y ++ AL Y HS+ II+RDLKP+NIL++K+G +K+ DFG ++ +P Y T
Sbjct: 111 YAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKY--VPDVTYXL-CGTP 167
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLF 266
Y PE+ + K Y+ ++D WS G + EM+ T F
Sbjct: 168 DYIAPEV-VSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 21/173 (12%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKF 179
Query: 140 ---YRPPEILLGAKVYSTTVDIWSAGCIFSE-------------MSYLYQLLE 176
+ PE L K +S D+W+ G + E +S +Y+LLE
Sbjct: 180 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 231
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW-- 230
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPI 181
Query: 231 -YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L K +S D+W+ G + E+ T
Sbjct: 182 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIAT 212
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 33/221 (14%)
Query: 2 VSDESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVF 53
V DE P +RV ++ V A L E SV+KE +V+RL V+ ++
Sbjct: 41 VKDE--PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM 98
Query: 54 EFL-RQDLKDFL-------QTTPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQ 103
E + R DLK +L + PV PP+L+K ++ + + Y ++ + +HRDL +
Sbjct: 99 ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 158
Query: 104 NILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSA 161
N ++ + +K+ DFG++R T + ++ + + PE L V++T D+WS
Sbjct: 159 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG-VFTTYSDVWSF 217
Query: 162 GCIFSEMSYL----YQLL---EALRYCHSRRIIHRDLKPQN 195
G + E++ L YQ L + LR+ ++ KP N
Sbjct: 218 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD---KPDN 255
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++ + +HRDL +N ++ + +K+ DFG++R T + ++ +
Sbjct: 137 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T D+WS G + E+ T
Sbjct: 197 WMSPESLKDG-VFTTYSDVWSFGVVLWEIAT 226
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 33/221 (14%)
Query: 2 VSDESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVF 53
V DE P +RV ++ V A L E SV+KE +V+RL V+ ++
Sbjct: 43 VKDE--PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM 100
Query: 54 EFL-RQDLKDFL-------QTTPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQ 103
E + R DLK +L + PV PP+L+K ++ + + Y ++ + +HRDL +
Sbjct: 101 ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 160
Query: 104 NILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSA 161
N ++ + +K+ DFG++R T + ++ + + PE L V++T D+WS
Sbjct: 161 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG-VFTTYSDVWSF 219
Query: 162 GCIFSEMSYL----YQLL---EALRYCHSRRIIHRDLKPQN 195
G + E++ L YQ L + LR+ ++ KP N
Sbjct: 220 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD---KPDN 257
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++ + +HRDL +N ++ + +K+ DFG++R T + ++ +
Sbjct: 139 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T D+WS G + E+ T
Sbjct: 199 WMSPESLKDG-VFTTYSDVWSFGVVLWEIAT 228
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFK--LFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
+EI +L+ L H N+++ + D + L+ EFL LK++L + Y
Sbjct: 60 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY 119
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEV 135
Q+ + + Y SR+ +HRDL +N+L+ +K+ DFGL++A T +
Sbjct: 120 AVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDS 179
Query: 136 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRYCHS 183
WY PE L+ +K Y + D+WS G E+ L YC S
Sbjct: 180 PVFWY-APECLMQSKFYIAS-DVWSFGVTLHEL---------LTYCDS 216
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 167 EMSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT--- 223
++ Y Q+ + + Y SR+ +HRDL +N+L+ +K+ DFGL++A T
Sbjct: 116 QLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKD 175
Query: 224 -HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ WY PE L+ +K Y + D+WS G E++T
Sbjct: 176 DRDSPVFWY-APECLMQSKFYIAS-DVWSFGVTLHELLT 212
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYLYQ 82
EI LK L+H ++ +L+ V+ K+F+V E+ +L D++ + + + Q
Sbjct: 58 EIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYI-ISQDRLSEEETRVVFRQ 116
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT----L 138
++ A+ Y HS+ HRDLKP+N+L ++ LKL DFGL P + + T L
Sbjct: 117 IVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAK---PKGNKDYHLQTCCGSL 173
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIF 165
Y PE++ G + D+WS G +
Sbjct: 174 AYAAPELIQGKSYLGSEADVWSMGILL 200
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 36/183 (19%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---- 228
Q++ A+ Y HS+ HRDLKP+N+L ++ LKL DFGL P + + T
Sbjct: 116 QIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAK---PKGNKDYHLQTCCGS 172
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
L Y PE++ G + D+WS G + ++ F D+ + +I R
Sbjct: 173 LAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG------- 225
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
K D P+W P ++ + +++ +DPK+R+S K +L H +
Sbjct: 226 -----------KYDVPKWLS-----------PSSILLLQQMLQVDPKKRISMKNLLNHPW 263
Query: 349 FNQ 351
Q
Sbjct: 264 IMQ 266
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 17 VPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPAL 75
P +EI + L H NV++ + +L E+ +L D ++ + +P
Sbjct: 48 CPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPD 106
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE- 134
A+ + +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRE 161
Query: 135 ------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
TL Y PE+L + ++ VD+WS G + + M
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 201
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---- 225
+ +QL+ + Y H I HRD+KP+N+L+++ LK++DFGL+ F RY +
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF-----RYNNRERLL 164
Query: 226 ---VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
TL Y PE+L + ++ VD+WS G + + M+ AG+ DQ
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML------AGELPWDQ-------- 210
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKK-FSEILNLPDPLAVDVFSKIMALDPKQRVSAK 341
P + ++ +W+ KK + D + + KI+ +P R++
Sbjct: 211 --PSDSC-----------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP 257
Query: 342 TILQHEYFNQ 351
I + ++N+
Sbjct: 258 DIKKDRWYNK 267
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 33 HPNVIRLHDVIPVDFKLFLVFE--FLRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYC 90
HP VIRL D LV E QDL D++ T P+ ++ + Q++ A+++C
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYI-TEKGPLGEGPSRCFFGQVVAAIQHC 155
Query: 91 HSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 149
HSR ++HRD+K +NILI+ + G KL DFG + YT T Y PPE +
Sbjct: 156 HSRGVVHRDIKDENILIDLRRGCAKLIDFG--SGALLHDEPYTDFDGTRVYSPPEWISRH 213
Query: 150 KVYSTTVDIWSAGCIFSEM 168
+ ++ +WS G + +M
Sbjct: 214 QYHALPATVWSLGILLYDM 232
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILIN-KSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Q++ A+++CHSR ++HRD+K +NILI+ + G KL DFG + YT
Sbjct: 143 CFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG--SGALLHDEPYTDFDG 200
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
T Y PPE + + ++ +WS G + +M+ F D EI
Sbjct: 201 TRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI 245
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 119 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKF 176
Query: 140 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ PE L K +S D+W+ G + E++
Sbjct: 177 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIA 208
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW-- 230
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPI 178
Query: 231 -YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L K +S D+W+ G + E+ T
Sbjct: 179 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIAT 209
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 33/221 (14%)
Query: 2 VSDESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVF 53
V DE P +RV ++ V A L E SV+KE +V+RL V+ ++
Sbjct: 43 VKDE--PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM 100
Query: 54 EFL-RQDLKDFL-------QTTPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQ 103
E + R DLK +L + PV PP+L+K ++ + + Y ++ + +HRDL +
Sbjct: 101 ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 160
Query: 104 NILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSA 161
N ++ + +K+ DFG++R T + ++ + + PE L V++T D+WS
Sbjct: 161 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG-VFTTYSDVWSF 219
Query: 162 GCIFSEMSYL----YQLL---EALRYCHSRRIIHRDLKPQN 195
G + E++ L YQ L + LR+ ++ KP N
Sbjct: 220 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD---KPDN 257
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++ + +HRDL +N ++ + +K+ DFG++R T + ++ +
Sbjct: 139 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T D+WS G + E+ T
Sbjct: 199 WMSPESLKDG-VFTTYSDVWSFGVVLWEIAT 228
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFK--LFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
REI +LK L+H N+++ V + L L+ E+L L+D+LQ + Y
Sbjct: 61 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 120
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT-- 137
Q+ + + Y ++R IHR+L +NIL+ +K+ DFGL++ +P ++ ++V
Sbjct: 121 TSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKV--LPQDKEYYKVKEPG 178
Query: 138 ----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY PE L +K +S D+WS G + E+
Sbjct: 179 ESPIFWY-APESLTESK-FSVASDVWSFGVVLYEL 211
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ Y Q+ + + Y ++R IHR+L +NIL+ +K+ DFGL++ +P ++ ++V
Sbjct: 118 LQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKV--LPQDKEYYKVK 175
Query: 228 T------LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L +K +S D+WS G + E+ T
Sbjct: 176 EPGESPIFWY-APESLTESK-FSVASDVWSFGVVLYELFT 213
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 14 VEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVP 72
++G S+ EI+VL+++KH N++ L D+ L+LV + + +L D +
Sbjct: 60 LKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTE 119
Query: 73 PALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMN 129
A + + Q+L+A+ Y H I+HRDLKP+N+L ++ + ++DFGLS+ +
Sbjct: 120 KD-ASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGD 177
Query: 130 RYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ T Y PE+ L K YS VD WS G I
Sbjct: 178 VMSTACGTPGYVAPEV-LAQKPYSKAVDCWSIGVI 211
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Q+L+A+ Y H I+HRDLKP+N+L ++ + ++DFGLS+ + + T
Sbjct: 128 QVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGDVMSTACGTP 186
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCI 255
Y PE+ L K YS VD WS G I
Sbjct: 187 GYVAPEV-LAQKPYSKAVDCWSIGVI 211
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 33/221 (14%)
Query: 2 VSDESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVF 53
V DE P +RV ++ V A L E SV+KE +V+RL V+ ++
Sbjct: 40 VKDE--PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM 97
Query: 54 EFL-RQDLKDFLQT-------TPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQ 103
E + R DLK +L++ PV PP+L+K ++ + + Y ++ + +HRDL +
Sbjct: 98 ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 157
Query: 104 NILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSA 161
N ++ + +K+ DFG++R T + ++ + + PE L V++T D+WS
Sbjct: 158 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG-VFTTYSDVWSF 216
Query: 162 GCIFSEMSYL----YQLL---EALRYCHSRRIIHRDLKPQN 195
G + E++ L YQ L + LR+ ++ KP N
Sbjct: 217 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD---KPDN 254
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++ + +HRDL +N ++ + +K+ DFG++R T + ++ +
Sbjct: 136 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 195
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T D+WS G + E+ T
Sbjct: 196 WMSPESLKDG-VFTTYSDVWSFGVVLWEIAT 225
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFL 64
+ +SR GV + RE+S+L+++ HPN+I LHDV + L+ E + +L DFL
Sbjct: 47 KRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A S++ Q+L+ + Y H+++I H DLKP+NI++ +KL DFGL
Sbjct: 107 AQKE-SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ + + + T + PEI + + D+WS G I
Sbjct: 166 AHEIEDGVE-FKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 207
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 31/182 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTH 224
S++ Q+L+ + Y H+++I H DLKP+NI++ +KL DFGL+ + + +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKN 177
Query: 225 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGT 284
T + PEI + + D+WS G I +++ + F GD++ + L
Sbjct: 178 IFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL--------- 227
Query: 285 PHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
+ + DF E E + LA D K++ + ++R++ + L
Sbjct: 228 ---------ANITAVSYDFDE-------EFFSQTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 345 QH 346
+H
Sbjct: 272 RH 273
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 33/221 (14%)
Query: 2 VSDESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVF 53
V DE P +RV ++ V A L E SV+KE +V+RL V+ ++
Sbjct: 50 VKDE--PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM 107
Query: 54 EFL-RQDLKDFL-------QTTPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQ 103
E + R DLK +L + PV PP+L+K ++ + + Y ++ + +HRDL +
Sbjct: 108 ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 167
Query: 104 NILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSA 161
N ++ + +K+ DFG++R T + ++ + + PE L V++T D+WS
Sbjct: 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG-VFTTYSDVWSF 226
Query: 162 GCIFSEMSYL----YQLL---EALRYCHSRRIIHRDLKPQN 195
G + E++ L YQ L + LR+ ++ KP N
Sbjct: 227 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD---KPDN 264
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++ + +HRDL +N ++ + +K+ DFG++R T + ++ +
Sbjct: 146 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T D+WS G + E+ T
Sbjct: 206 WMSPESLKDG-VFTTYSDVWSFGVVLWEIAT 235
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 5 ESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFL 64
E +P R Q+ +RE+ VL E P ++ + D ++ + E + D +
Sbjct: 61 EIKPAIRNQI-------IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV 113
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRA 123
+P + +++ L Y + +I+HRD+KP NIL+N G +KL DFG+S
Sbjct: 114 LKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 173
Query: 124 FTIPM-NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
M N + V T Y PE L G YS DIWS G EM+
Sbjct: 174 LIDSMANSF---VGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMA 216
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 174 LLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRAFTIPM-NRYTHEVVTLWY 231
+++ L Y + +I+HRD+KP NIL+N G +KL DFG+S M N + V T Y
Sbjct: 132 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSY 188
Query: 232 RPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIF 279
PE L G YS DIWS G EM + S +F +
Sbjct: 189 MSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELL 235
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 119 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKF 176
Query: 140 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ PE L K +S D+W+ G + E++
Sbjct: 177 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIA 208
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW-- 230
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPI 178
Query: 231 -YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L K +S D+W+ G + E+ T
Sbjct: 179 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIAT 209
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKF 179
Query: 140 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ PE L K +S D+W+ G + E++
Sbjct: 180 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIA 211
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW-- 230
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPI 181
Query: 231 -YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L K +S D+W+ G + E+ T
Sbjct: 182 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 120
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 121 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKF 178
Query: 140 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ PE L K +S D+W+ G + E++
Sbjct: 179 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIA 210
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW-- 230
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 123 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPI 180
Query: 231 -YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L K +S D+W+ G + E+ T
Sbjct: 181 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIAT 211
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 116
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKF 174
Query: 140 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ PE L K +S D+W+ G + E++
Sbjct: 175 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIA 206
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW-- 230
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPI 176
Query: 231 -YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L K +S D+W+ G + E+ T
Sbjct: 177 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIAT 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 70 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 129
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 130 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKF 187
Query: 140 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ PE L K +S D+W+ G + E++
Sbjct: 188 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIA 219
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW-- 230
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 132 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPI 189
Query: 231 -YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L K +S D+W+ G + E+ T
Sbjct: 190 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIAT 220
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 116
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKF 174
Query: 140 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ PE L K +S D+W+ G + E++
Sbjct: 175 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIA 206
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW-- 230
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPI 176
Query: 231 -YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L K +S D+W+ G + E+ T
Sbjct: 177 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIAT 207
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 33/221 (14%)
Query: 2 VSDESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVF 53
V DE P +RV ++ V A L E SV+KE +V+RL V+ ++
Sbjct: 50 VKDE--PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM 107
Query: 54 EFL-RQDLKDFLQT-------TPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQ 103
E + R DLK +L++ PV PP+L+K ++ + + Y ++ + +HRDL +
Sbjct: 108 ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 167
Query: 104 NILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSA 161
N ++ + +K+ DFG++R T + ++ + + PE L V++T D+WS
Sbjct: 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG-VFTTYSDVWSF 226
Query: 162 GCIFSEMSYL----YQLL---EALRYCHSRRIIHRDLKPQN 195
G + E++ L YQ L + LR+ ++ KP N
Sbjct: 227 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD---KPDN 264
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++ + +HRDL +N ++ + +K+ DFG++R T + ++ +
Sbjct: 146 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T D+WS G + E+ T
Sbjct: 206 WMSPESLKDG-VFTTYSDVWSFGVVLWEIAT 235
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNIL-INKSG---ALKLADFGLSRAFTIPMNRYTHEV 226
L+ + + + Y HS+ ++HRDLKP NIL +++SG L++ DFG ++
Sbjct: 127 LHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAG---DSEIDQLFRIFRTLG 283
T + PE+ L + Y DIWS G + M+ T FA D+ + L RI
Sbjct: 187 YTANFVAPEV-LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKF 245
Query: 284 TPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
T W VS+ A D+ SK++ +DP QR++AK +
Sbjct: 246 TLSGGNWNTVSE-------------------------TAKDLVSKMLHVDPHQRLTAKQV 280
Query: 344 LQHEYFNQ 351
LQH + Q
Sbjct: 281 LQHPWVTQ 288
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 27 VLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLE 85
+L+ +HPN+I L DV ++LV E +R +L D + A L+ + +
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF-FSEREASFVLHTIGK 132
Query: 86 ALRYCHSRRIIHRDLKPQNIL-INKSG---ALKLADFGLSRAFTIPMNRYTHEVVTLWYR 141
+ Y HS+ ++HRDLKP NIL +++SG L++ DFG ++ T +
Sbjct: 133 TVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV 192
Query: 142 PPEILLGAKVYSTTVDIWSAGCIFSEM 168
PE+ L + Y DIWS G + M
Sbjct: 193 APEV-LKRQGYDEGCDIWSLGILLYTM 218
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 4/151 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 58 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYM 117
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI-PMNRYTHEVVTL 138
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + +
Sbjct: 118 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 177
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ PE L K +S D+W+ G + E++
Sbjct: 178 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIA 207
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI-PMNRYTHEVVTLWY 231
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + + +
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 179
Query: 232 RPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
PE L K +S D+W+ G + E+ T
Sbjct: 180 TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 208
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 4/151 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI-PMNRYTHEVVTL 138
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + +
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI 174
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ PE L K +S D+W+ G + E++
Sbjct: 175 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIA 204
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI-PMNRYTHEVVTLWY 231
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + + +
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKW 176
Query: 232 RPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
PE L K +S D+W+ G + E+ T
Sbjct: 177 TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 205
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 33/221 (14%)
Query: 2 VSDESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVF 53
V DE P +RV ++ V A L E SV+KE +V+RL V+ ++
Sbjct: 72 VKDE--PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM 129
Query: 54 EFL-RQDLKDFL-------QTTPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQ 103
E + R DLK +L + PV PP+L+K ++ + + Y ++ + +HRDL +
Sbjct: 130 ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 189
Query: 104 NILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSA 161
N ++ + +K+ DFG++R T + ++ + + PE L V++T D+WS
Sbjct: 190 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG-VFTTYSDVWSF 248
Query: 162 GCIFSEMSYL----YQLL---EALRYCHSRRIIHRDLKPQN 195
G + E++ L YQ L + LR+ ++ KP N
Sbjct: 249 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD---KPDN 286
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++ + +HRDL +N ++ + +K+ DFG++R T + ++ +
Sbjct: 168 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 227
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T D+WS G + E+ T
Sbjct: 228 WMSPESLKDG-VFTTYSDVWSFGVVLWEIAT 257
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 5 ESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFL 64
E +P R Q+ +RE+ VL E P ++ + D ++ + E + D +
Sbjct: 45 EIKPAIRNQI-------IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV 97
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRA 123
+P + +++ L Y + +I+HRD+KP NIL+N G +KL DFG+S
Sbjct: 98 LKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 157
Query: 124 FTIPM-NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
M N + V T Y PE L G YS DIWS G EM+
Sbjct: 158 LIDEMANEF---VGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMA 200
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 174 LLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRAFTIPM-NRYTHEVVTLWY 231
+++ L Y + +I+HRD+KP NIL+N G +KL DFG+S M N + V T Y
Sbjct: 116 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEF---VGTRSY 172
Query: 232 RPPEILLGAKVYSTTVDIWSAGCIFSEMITKK 263
PE L G YS DIWS G EM +
Sbjct: 173 MSPERLQGTH-YSVQSDIWSMGLSLVEMAVGR 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 5 ESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFL 64
E +P R Q+ +RE+ VL E P ++ + D ++ + E + D +
Sbjct: 69 EIKPAIRNQI-------IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV 121
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRA 123
+P + +++ L Y + +I+HRD+KP NIL+N G +KL DFG+S
Sbjct: 122 LKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 181
Query: 124 FTIPM-NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
M N + V T Y PE L G YS DIWS G EM+
Sbjct: 182 LIDSMANSF---VGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMA 224
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 174 LLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRAFTIPM-NRYTHEVVTLWY 231
+++ L Y + +I+HRD+KP NIL+N G +KL DFG+S M N + V T Y
Sbjct: 140 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSY 196
Query: 232 RPPEILLGAKVYSTTVDIWSAGCIFSEMITKK 263
PE L G YS DIWS G EM +
Sbjct: 197 MSPERLQGTH-YSVQSDIWSMGLSLVEMAVGR 227
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNIL-INKSG---ALKLADFGLSRAFTIPMNRYTHEV 226
L+ + + + Y HS+ ++HRDLKP NIL +++SG L++ DFG ++
Sbjct: 127 LHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAG---DSEIDQLFRIFRTLG 283
T + PE+ L + Y DIWS G + M+ T FA D+ + L RI
Sbjct: 187 YTANFVAPEV-LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKF 245
Query: 284 TPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
T W VS+ A D+ SK++ +DP QR++AK +
Sbjct: 246 TLSGGNWNTVSE-------------------------TAKDLVSKMLHVDPHQRLTAKQV 280
Query: 344 LQHEYFNQ 351
LQH + Q
Sbjct: 281 LQHPWVTQ 288
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 27 VLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLE 85
+L+ +HPN+I L DV ++LV E +R +L D + A L+ + +
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF-FSEREASFVLHTIGK 132
Query: 86 ALRYCHSRRIIHRDLKPQNIL-INKSG---ALKLADFGLSRAFTIPMNRYTHEVVTLWYR 141
+ Y HS+ ++HRDLKP NIL +++SG L++ DFG ++ T +
Sbjct: 133 TVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV 192
Query: 142 PPEILLGAKVYSTTVDIWSAGCIFSEM 168
PE+ L + Y DIWS G + M
Sbjct: 193 APEV-LKRQGYDEGCDIWSLGILLYTM 218
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 4/151 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI-PMNRYTHEVVTL 138
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + +
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 174
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ PE L K +S D+W+ G + E++
Sbjct: 175 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIA 204
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI-PMNRYTHEVVTLWY 231
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + + +
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 176
Query: 232 RPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
PE L K +S D+W+ G + E+ T
Sbjct: 177 TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 205
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 5 ESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFL 64
E +P R Q+ +RE+ VL E P ++ + D ++ + E + D +
Sbjct: 42 EIKPAIRNQI-------IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV 94
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRA 123
+P + +++ L Y + +I+HRD+KP NIL+N G +KL DFG+S
Sbjct: 95 LKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 154
Query: 124 FTIPM-NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
M N + V T Y PE L G YS DIWS G EM+
Sbjct: 155 LIDSMANSF---VGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMA 197
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 174 LLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRAFTIPM-NRYTHEVVTLWY 231
+++ L Y + +I+HRD+KP NIL+N G +KL DFG+S M N + V T Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSY 169
Query: 232 RPPEILLGAKVYSTTVDIWSAGCIFSEMITKK 263
PE L G YS DIWS G EM +
Sbjct: 170 MSPERLQGTH-YSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 5 ESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFL 64
E +P R Q+ +RE+ VL E P ++ + D ++ + E + D +
Sbjct: 42 EIKPAIRNQI-------IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV 94
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRA 123
+P + +++ L Y + +I+HRD+KP NIL+N G +KL DFG+S
Sbjct: 95 LKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 154
Query: 124 FTIPM-NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
M N + V T Y PE L G YS DIWS G EM+
Sbjct: 155 LIDSMANSF---VGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMA 197
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 174 LLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRAFTIPM-NRYTHEVVTLWY 231
+++ L Y + +I+HRD+KP NIL+N G +KL DFG+S M N + V T Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSY 169
Query: 232 RPPEILLGAKVYSTTVDIWSAGCIFSEMITKK 263
PE L G YS DIWS G EM +
Sbjct: 170 MSPERLQGTH-YSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 5 ESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFL 64
E +P R Q+ +RE+ VL E P ++ + D ++ + E + D +
Sbjct: 42 EIKPAIRNQI-------IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV 94
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRA 123
+P + +++ L Y + +I+HRD+KP NIL+N G +KL DFG+S
Sbjct: 95 LKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 154
Query: 124 FTIPM-NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
M N + V T Y PE L G YS DIWS G EM+
Sbjct: 155 LIDSMANSF---VGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMA 197
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 174 LLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRAFTIPM-NRYTHEVVTLWY 231
+++ L Y + +I+HRD+KP NIL+N G +KL DFG+S M N + V T Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSY 169
Query: 232 RPPEILLGAKVYSTTVDIWSAGCIFSEMITKK 263
PE L G YS DIWS G EM +
Sbjct: 170 MSPERLQGTH-YSVQSDIWSMGLSLVEMAVGR 200
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 5 ESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFL 64
E +P R Q+ +RE+ VL E P ++ + D ++ + E + D +
Sbjct: 104 EIKPAIRNQI-------IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV 156
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRA 123
+P + +++ L Y + +I+HRD+KP NIL+N G +KL DFG+S
Sbjct: 157 LKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 216
Query: 124 FTIPM-NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
M N + V T Y PE L G YS DIWS G EM+
Sbjct: 217 LIDSMANSF---VGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMA 259
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 174 LLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRAFTIPM-NRYTHEVVTLWY 231
+++ L Y + +I+HRD+KP NIL+N G +KL DFG+S M N + V T Y
Sbjct: 175 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSY 231
Query: 232 RPPEILLGAKVYSTTVDIWSAGCIFSEMITKK 263
PE L G YS DIWS G EM +
Sbjct: 232 MSPERLQGTH-YSVQSDIWSMGLSLVEMAVGR 262
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 23 REISVLKELKHPNVIRLHDVI--PVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSY 79
REI +LK L +++ V P +L LV E+L L+DFLQ + + Y
Sbjct: 57 REIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 116
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN----RYTHEV 135
Q+ + + Y SRR +HRDL +NIL+ +K+ADFGL++ + + R +
Sbjct: 117 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQS 176
Query: 136 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY P L ++S D+WS G + E+
Sbjct: 177 PIFWYAPES--LSDNIFSRQSDVWSFGVVLYEL 207
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN----RYTHE 225
Y Q+ + + Y SRR +HRDL +NIL+ +K+ADFGL++ + + R +
Sbjct: 116 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQ 175
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY P L ++S D+WS G + E+ T
Sbjct: 176 SPIFWYAPES--LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 5 ESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFL 64
E +P R Q+ +RE+ VL E P ++ + D ++ + E + D +
Sbjct: 42 EIKPAIRNQI-------IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV 94
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRA 123
+P + +++ L Y + +I+HRD+KP NIL+N G +KL DFG+S
Sbjct: 95 LKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 154
Query: 124 FTIPM-NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
M N + V T Y PE L G YS DIWS G EM+
Sbjct: 155 LIDSMANSF---VGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMA 197
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 174 LLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRAFTIPM-NRYTHEVVTLWY 231
+++ L Y + +I+HRD+KP NIL+N G +KL DFG+S M N + V T Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSY 169
Query: 232 RPPEILLGAKVYSTTVDIWSAGCIFSEMITKK 263
PE L G YS DIWS G EM +
Sbjct: 170 MSPERLQGTH-YSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 5 ESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFL 64
E +P R Q+ +RE+ VL E P ++ + D ++ + E + D +
Sbjct: 42 EIKPAIRNQI-------IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV 94
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRA 123
+P + +++ L Y + +I+HRD+KP NIL+N G +KL DFG+S
Sbjct: 95 LKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 154
Query: 124 FTIPM-NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
M N + V T Y PE L G YS DIWS G EM+
Sbjct: 155 LIDSMANSF---VGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMA 197
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 174 LLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRAFTIPM-NRYTHEVVTLWY 231
+++ L Y + +I+HRD+KP NIL+N G +KL DFG+S M N + V T Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSY 169
Query: 232 RPPEILLGAKVYSTTVDIWSAGCIFSEMITKK 263
PE L G YS DIWS G EM +
Sbjct: 170 MSPERLQGTH-YSVQSDIWSMGLSLVEMAVGR 200
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 58 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 117
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 118 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAPAGAKF 175
Query: 140 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ PE L K +S D+W+ G + E++
Sbjct: 176 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIA 207
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW-- 230
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAPAGAKFPI 177
Query: 231 -YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L K +S D+W+ G + E+ T
Sbjct: 178 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 119 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAPAGAKF 176
Query: 140 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ PE L K +S D+W+ G + E++
Sbjct: 177 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIA 208
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW-- 230
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAPAGAKFPI 178
Query: 231 -YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L K +S D+W+ G + E+ T
Sbjct: 179 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIAT 209
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 44/216 (20%)
Query: 156 VDIWSAGCIFSEMS------------YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA 203
+D + G +F+ +S Y+ +++ AL + H II+RD+K +NIL++ +G
Sbjct: 138 LDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGH 197
Query: 204 LKLADFGLSRAFTIPMNRYTHEVV-TLWYRPPEILLGAKV-YSTTVDIWSAGCIFSEMIT 261
+ L DFGLS+ F ++ T+ Y P+I+ G + VD WS G + E++T
Sbjct: 198 VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 257
Query: 262 KKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPL 321
+ F D E + I R I K++ P P++ S L
Sbjct: 258 GASPFTVDGEKNSQAEISRR----------------ILKSEPP--YPQEMS-------AL 292
Query: 322 AVDVFSKIMALDPKQRVS-----AKTILQHEYFNQV 352
A D+ +++ DPK+R+ A I +H +F ++
Sbjct: 293 AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 24 EISVLKELKH-PNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQ 82
E VL+ ++ P ++ LH + KL L+ +++ + + Y+ +
Sbjct: 108 ERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGE 167
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV-TLWYR 141
++ AL + H II+RD+K +NIL++ +G + L DFGLS+ F ++ T+ Y
Sbjct: 168 IVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYM 227
Query: 142 PPEILLGAKV-YSTTVDIWSAGCIFSEM 168
P+I+ G + VD WS G + E+
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYEL 255
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 83/157 (52%), Gaps = 7/157 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
+ E V+ L H +++L+ V +F++ E++ L ++L+
Sbjct: 51 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 110
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+ EA+ Y S++ +HRDL +N L+N G +K++DFGLSR + + YT V + +
Sbjct: 111 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR--YVLDDEYTSSVGSKFP 168
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQL 174
+ PPE+L+ +K +S+ DIW+ G + E+ L ++
Sbjct: 169 VRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLGKM 204
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 19/118 (16%)
Query: 160 SAGCIFS---EMSYLYQ----------LLEALRYCHSRRIIHRDLKPQNILINKSGALKL 206
+ GC+ + EM + +Q + EA+ Y S++ +HRDL +N L+N G +K+
Sbjct: 86 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 145
Query: 207 ADFGLSRAFTIPMNRYTHEVVTLW---YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+DFGLSR + + YT V + + + PPE+L+ +K +S+ DIW+ G + E+ +
Sbjct: 146 SDFGLSR--YVLDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYS 200
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 83/157 (52%), Gaps = 7/157 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
+ E V+ L H +++L+ V +F++ E++ L ++L+
Sbjct: 58 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 117
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+ EA+ Y S++ +HRDL +N L+N G +K++DFGLSR + + YT V + +
Sbjct: 118 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR--YVLDDEYTSSVGSKFP 175
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQL 174
+ PPE+L+ +K +S+ DIW+ G + E+ L ++
Sbjct: 176 VRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLGKM 211
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 19/118 (16%)
Query: 160 SAGCIFS---EMSYLYQ----------LLEALRYCHSRRIIHRDLKPQNILINKSGALKL 206
+ GC+ + EM + +Q + EA+ Y S++ +HRDL +N L+N G +K+
Sbjct: 93 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 152
Query: 207 ADFGLSRAFTIPMNRYTHEVVTLW---YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+DFGLSR + + YT V + + + PPE+L+ +K +S+ DIW+ G + E+ +
Sbjct: 153 SDFGLSR--YVLDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYS 207
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 33/221 (14%)
Query: 2 VSDESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVF 53
V DE P +RV ++ V A L E SV+KE +V+RL V+ ++
Sbjct: 37 VKDE--PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM 94
Query: 54 EFL-RQDLKDFL-------QTTPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQ 103
E + R DLK +L + PV PP+L+K ++ + + Y ++ + +HRDL +
Sbjct: 95 ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 154
Query: 104 NILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSA 161
N + + +K+ DFG++R T + ++ + + PE L V++T D+WS
Sbjct: 155 NCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG-VFTTYSDVWSF 213
Query: 162 GCIFSEMSYL----YQLL---EALRYCHSRRIIHRDLKPQN 195
G + E++ L YQ L + LR+ ++ KP N
Sbjct: 214 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD---KPDN 251
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++ + +HRDL +N + + +K+ DFG++R T + ++ +
Sbjct: 133 EIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T D+WS G + E+ T
Sbjct: 193 WMSPESLKDG-VFTTYSDVWSFGVVLWEIAT 222
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 83/157 (52%), Gaps = 7/157 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
+ E V+ L H +++L+ V +F++ E++ L ++L+
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 126
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+ EA+ Y S++ +HRDL +N L+N G +K++DFGLSR + + YT V + +
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR--YVLDDEYTSSVGSKFP 184
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQL 174
+ PPE+L+ +K +S+ DIW+ G + E+ L ++
Sbjct: 185 VRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLGKM 220
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 19/118 (16%)
Query: 160 SAGCIFS---EMSYLYQ----------LLEALRYCHSRRIIHRDLKPQNILINKSGALKL 206
+ GC+ + EM + +Q + EA+ Y S++ +HRDL +N L+N G +K+
Sbjct: 102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 161
Query: 207 ADFGLSRAFTIPMNRYTHEVVTLW---YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+DFGLSR + + YT V + + + PPE+L+ +K +S+ DIW+ G + E+ +
Sbjct: 162 SDFGLSR--YVLDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYS 216
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 83/155 (53%), Gaps = 14/155 (9%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQT---TPVPVPPALAK 77
L E +++K L+H ++RL+ V+ + ++++ E++ + L DFL++ V +P +
Sbjct: 56 LEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLI-- 113
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----H 133
+ Q+ E + Y + IHRDL+ N+L+++S K+ADFGL+R I N YT
Sbjct: 114 DFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR--VIEDNEYTAREGA 171
Query: 134 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ W P I G ++ D+WS G + E+
Sbjct: 172 KFPIKWTAPEAINFGC--FTIKSDVWSFGILLYEI 204
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 15/126 (11%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ E + Y + IHRDL+ N+L+++S K+ADFGL+R I N YT +
Sbjct: 118 QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR--VIEDNEYTAREGAKFPI 175
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT-KKTLFAGDSEID------QLFRIFRT 281
W P I G ++ D+WS G + E++T K + G + D Q +R+ R
Sbjct: 176 KWTAPEAINFGC--FTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRV 233
Query: 282 LGTPHE 287
P E
Sbjct: 234 ENCPDE 239
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 84/158 (53%), Gaps = 13/158 (8%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALA 76
P L E +++K+L+H ++RL+ V+ + ++++ E++ L DFL+T P + +
Sbjct: 58 PDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKT-PSGIKLTIN 115
Query: 77 K--SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT-- 132
K Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R I N YT
Sbjct: 116 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAR 173
Query: 133 --HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ W P I G ++ D+WS G + +E+
Sbjct: 174 EGAKFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEI 209
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R I N YT +
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPI 180
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
W P I G ++ D+WS G + +E++T
Sbjct: 181 KWTAPEAINYG--TFTIKSDVWSFGILLTEIVT 211
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 4/151 (2%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI-PMNRYTHEVVTL 138
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + +
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 181
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ PE L K +S D+W+ G + E++
Sbjct: 182 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIA 211
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI-PMNRYTHEVVTLWY 231
Q+ A+ Y + IHRDL +N L+ ++ +K+ADFGLSR T + + +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 183
Query: 232 RPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
PE L K +S D+W+ G + E+ T
Sbjct: 184 TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 212
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 83/157 (52%), Gaps = 7/157 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
+ E V+ L H +++L+ V +F++ E++ L ++L+
Sbjct: 52 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 111
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+ EA+ Y S++ +HRDL +N L+N G +K++DFGLSR + + YT V + +
Sbjct: 112 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR--YVLDDEYTSSVGSKFP 169
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQL 174
+ PPE+L+ +K +S+ DIW+ G + E+ L ++
Sbjct: 170 VRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLGKM 205
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 19/118 (16%)
Query: 160 SAGCIFS---EMSYLYQ----------LLEALRYCHSRRIIHRDLKPQNILINKSGALKL 206
+ GC+ + EM + +Q + EA+ Y S++ +HRDL +N L+N G +K+
Sbjct: 87 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 146
Query: 207 ADFGLSRAFTIPMNRYTHEVVTLW---YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+DFGLSR + + YT V + + + PPE+L+ +K +S+ DIW+ G + E+ +
Sbjct: 147 SDFGLSR--YVLDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYS 201
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 84/158 (53%), Gaps = 13/158 (8%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALA 76
P L E +++K+L+H ++RL+ V+ + ++++ E++ L DFL+T P + +
Sbjct: 47 PDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKT-PSGIKLTIN 104
Query: 77 K--SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT-- 132
K Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R I N YT
Sbjct: 105 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAR 162
Query: 133 --HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ W P I G ++ D+WS G + +E+
Sbjct: 163 EGAKFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEI 198
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R I N YT +
Sbjct: 112 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPI 169
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
W P I G ++ D+WS G + +E++T
Sbjct: 170 KWTAPEAINYG--TFTIKSDVWSFGILLTEIVT 200
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 84/158 (53%), Gaps = 13/158 (8%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALA 76
P L E +++K+L+H ++RL+ V+ + ++++ E++ L DFL+T P + +
Sbjct: 57 PDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKT-PSGIKLTIN 114
Query: 77 K--SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT-- 132
K Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R I N YT
Sbjct: 115 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAR 172
Query: 133 --HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ W P I G ++ D+WS G + +E+
Sbjct: 173 EGAKFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEI 208
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R I N YT +
Sbjct: 122 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPI 179
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
W P I G ++ D+WS G + +E++T
Sbjct: 180 KWTAPEAINYG--TFTIKSDVWSFGILLTEIVT 210
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ D+ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +K+ADFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +K+ADFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 81/152 (53%), Gaps = 19/152 (12%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQT---TPVPVPPALAK 77
L E +V+K L+H +++LH V+ + ++++ EF+ + L DFL++ + P+P +
Sbjct: 225 LAEANVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI-- 281
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-AFTIPMNRYTHEVV 136
+ Q+ E + + R IHRDL+ NIL++ S K+ADFGL+R P+
Sbjct: 282 DFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK------- 334
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W P I G+ ++ D+WS G + E+
Sbjct: 335 --WTAPEAINFGS--FTIKSDVWSFGILLMEI 362
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-AFTIPMNRYTHEVVTLWY 231
Q+ E + + R IHRDL+ NIL++ S K+ADFGL+R P+ W
Sbjct: 286 QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK---------WT 336
Query: 232 RPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
P I G+ ++ D+WS G + E++T
Sbjct: 337 APEAINFGS--FTIKSDVWSFGILLMEIVT 364
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 35/196 (17%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALK--LADFGLSRAFTIPMNRY 222
++ L Q L + HS I+HRDLKP NILI N G +K ++DFGL + + + +
Sbjct: 121 ITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF 180
Query: 223 THEV----VTLWYRPPEILLGAKVYST-TVDIWSAGCIFSEMITKKTLFAGDSEIDQLFR 277
+ W P + K T TVDI+SAGC+F +I++ + G S Q
Sbjct: 181 SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ--- 237
Query: 278 IFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQR 337
++ G L P+K ++ +A ++ K++A+DP++R
Sbjct: 238 ---------ANILLGACSLDC-------LHPEKHEDV------IARELIEKMIAMDPQKR 275
Query: 338 VSAKTILQHEYFNQVE 353
SAK +L+H +F +E
Sbjct: 276 PSAKHVLKHPFFWSLE 291
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 79/166 (47%), Gaps = 27/166 (16%)
Query: 19 STALREISVLKEL-KHPNVIRLH--------DVIPVDFKLFLVFEFLRQDLKDFLQTTPV 69
S A RE+ +L+E +HPNVIR I ++ + E++ Q KDF
Sbjct: 62 SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQ--KDFAHLGLE 119
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALK--LADFGLSRAF 124
P+ + L Q L + HS I+HRDLKP NILI N G +K ++DFGL +
Sbjct: 120 PI------TLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173
Query: 125 TIPMNRYTHEV----VTLWYRPPEILLGAKVYST-TVDIWSAGCIF 165
+ + ++ W P + K T TVDI+SAGC+F
Sbjct: 174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVF 219
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 13/167 (7%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTT 67
+S Q P L E +++K+L+H ++RL+ V+ + ++++ E++ L DFL+T
Sbjct: 43 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKT- 100
Query: 68 PVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
P + + K Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR--L 158
Query: 126 IPMNRYT----HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
I N YT + W P I G ++ D+WS G + +E+
Sbjct: 159 IEDNEYTAREGAKFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEI 203
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R I N YT +
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPI 174
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
W P I G ++ D+WS G + +E++T
Sbjct: 175 KWTAPEAINYG--TFTIKSDVWSFGILLTEIVT 205
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 5/153 (3%)
Query: 15 EGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPP 73
E T +EI + L+HP ++ LHD D ++ +++EF+ +L + + +
Sbjct: 89 ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE 148
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILIN--KSGALKLADFGLSRAFTIPMNRY 131
A Y+ Q+ + L + H +H DLKP+NI+ +S LKL DFGL+ A P
Sbjct: 149 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT-AHLDPKQSV 207
Query: 132 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
T + PE+ G V T D+WS G +
Sbjct: 208 KVTTGTAEFAAPEVAEGKPVGYYT-DMWSVGVL 239
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 4/154 (2%)
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRYCHSRRIIHRDLKPQNILIN--KS 201
E + G +++ D + + Y+ Q+ + L + H +H DLKP+NI+ +S
Sbjct: 128 EFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRS 187
Query: 202 GALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
LKL DFGL+ A P T + PE+ G V T D+WS G + +++
Sbjct: 188 NELKLIDFGLT-AHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT-DMWSVGVLSYILLS 245
Query: 262 KKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSK 295
+ F G+++ + L + + + G+S+
Sbjct: 246 GLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE 279
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ D+ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +K+ADFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +K+ADFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 83/157 (52%), Gaps = 7/157 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
+ E V+ L H +++L+ V +F++ E++ L ++L+
Sbjct: 47 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 106
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+ EA+ Y S++ +HRDL +N L+N G +K++DFGLSR + + YT V + +
Sbjct: 107 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR--YVLDDEYTSSVGSKFP 164
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQL 174
+ PPE+L+ +K +S+ DIW+ G + E+ L ++
Sbjct: 165 VRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLGKM 200
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 19/118 (16%)
Query: 160 SAGCIFS---EMSYLYQ----------LLEALRYCHSRRIIHRDLKPQNILINKSGALKL 206
+ GC+ + EM + +Q + EA+ Y S++ +HRDL +N L+N G +K+
Sbjct: 82 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 141
Query: 207 ADFGLSRAFTIPMNRYTHEVVTLW---YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+DFGLSR + + YT V + + + PPE+L+ +K +S+ DIW+ G + E+ +
Sbjct: 142 SDFGLSR--YVLDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYS 196
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 21/173 (12%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 264 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 323
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT-- 137
Q+ A+ Y + IHR+L +N L+ ++ +K+ADFGLSR T + YT
Sbjct: 324 ATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKF 381
Query: 138 -LWYRPPEILLGAKVYSTTVDIWSAGCIFSE-------------MSYLYQLLE 176
+ + PE L K +S D+W+ G + E +S +Y+LLE
Sbjct: 382 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 433
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 229
Q+ A+ Y + IHR+L +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 326 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPI 383
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L K +S D+W+ G + E+ T
Sbjct: 384 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIAT 414
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 83/155 (53%), Gaps = 14/155 (9%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQT---TPVPVPPALAK 77
L E +++K L+H ++RL+ V+ + ++++ EF+ + L DFL++ V +P +
Sbjct: 55 LEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLI-- 112
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----H 133
+ Q+ E + Y + IHRDL+ N+L+++S K+ADFGL+R I N YT
Sbjct: 113 DFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR--VIEDNEYTAREGA 170
Query: 134 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ W P I G ++ ++WS G + E+
Sbjct: 171 KFPIKWTAPEAINFGC--FTIKSNVWSFGILLYEI 203
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 15/126 (11%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ E + Y + IHRDL+ N+L+++S K+ADFGL+R I N YT +
Sbjct: 117 QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR--VIEDNEYTAREGAKFPI 174
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT-KKTLFAGDSEID------QLFRIFRT 281
W P I G ++ ++WS G + E++T K + G + D Q +R+ R
Sbjct: 175 KWTAPEAINFGC--FTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRM 232
Query: 282 LGTPHE 287
P E
Sbjct: 233 ENCPDE 238
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 8/185 (4%)
Query: 15 EGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPA 74
E + REI + L+HPN++R +VI L +V E+
Sbjct: 56 EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED 115
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA--LKLADFGLSRAFTIPMNRYT 132
A+ + QL+ + YCH+ ++ HRDLK +N L++ S A LK+ FG S++ ++ ++
Sbjct: 116 EARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS-SVLHSQPK 174
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM---SYLYQLLEALRYCHSRRIIHR 189
V T Y PE+LL + D+WS G M +Y ++ E + + R+ IHR
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPK--NFRKTIHR 232
Query: 190 DLKPQ 194
L Q
Sbjct: 233 ILNVQ 237
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA--LKLADFGLSRAFTIPMNRYTHEVV 227
+ QL+ + YCH+ ++ HRDLK +N L++ S A LK+ FG S++ ++ ++ V
Sbjct: 120 FFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS-SVLHSQPKSTVG 178
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFR--IFRTLGTP 285
T Y PE+LL + D+WS G M+ F D E + FR I R L
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE-DPEEPKNFRKTIHRILNVQ 237
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
+ +P Y PE R + S+I DP +R+S I
Sbjct: 238 Y--------AIPDYVHISPECR----------------HLISRIFVADPAKRISIPEIRN 273
Query: 346 HEYF 349
HE+F
Sbjct: 274 HEWF 277
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 84/158 (53%), Gaps = 13/158 (8%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALA 76
P L E +++K+L+H ++RL+ V+ + ++++ E++ L DFL+T P + +
Sbjct: 62 PDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKT-PSGIKLTIN 119
Query: 77 K--SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT-- 132
K Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R I N YT
Sbjct: 120 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAR 177
Query: 133 --HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ W P I G ++ D+WS G + +E+
Sbjct: 178 EGAKFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEI 213
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R I N YT +
Sbjct: 127 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPI 184
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
W P I G ++ D+WS G + +E++T
Sbjct: 185 KWTAPEAINYG--TFTIKSDVWSFGILLTEIVT 215
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 8/185 (4%)
Query: 15 EGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPA 74
E + REI + L+HPN++R +VI L +V E+
Sbjct: 56 EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED 115
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA--LKLADFGLSRAFTIPMNRYT 132
A+ + QL+ + YCH+ ++ HRDLK +N L++ S A LK+ FG S++ ++ ++
Sbjct: 116 EARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS-SVLHSQPK 174
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM---SYLYQLLEALRYCHSRRIIHR 189
V T Y PE+LL + D+WS G M +Y ++ E + + R+ IHR
Sbjct: 175 DTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPK--NFRKTIHR 232
Query: 190 DLKPQ 194
L Q
Sbjct: 233 ILNVQ 237
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA--LKLADFGLSRAFTIPMNRYTHEVV 227
+ QL+ + YCH+ ++ HRDLK +N L++ S A LK+ FG S++ ++ ++ V
Sbjct: 120 FFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS-SVLHSQPKDTVG 178
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFR--IFRTLGTP 285
T Y PE+LL + D+WS G M+ F D E + FR I R L
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE-DPEEPKNFRKTIHRILNVQ 237
Query: 286 HEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQ 345
+ +P Y PE R + S+I DP +R+S I
Sbjct: 238 Y--------AIPDYVHISPECR----------------HLISRIFVADPAKRISIPEIRN 273
Query: 346 HEYF 349
HE+F
Sbjct: 274 HEWF 277
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQ 82
EI +LK+L HP +I++ + + ++V E + +L D + + A K Y YQ
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQ 121
Query: 83 LLEALRYCHSRRIIHRDLKPQNILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
+L A++Y H IIHRDLKP+N+L++ + +K+ DFG S+ T T
Sbjct: 122 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPT 180
Query: 140 YRPPEIL--LGAKVYSTTVDIWSAGCIF 165
Y PE+L +G Y+ VD WS G I
Sbjct: 181 YLAPEVLVSVGTAGYNRAVDCWSLGVIL 208
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 37/224 (16%)
Query: 139 WYRPPEILLGAKVYSTTVD---IWSAGCIFSEMSYLYQLLEALRYCHSRRIIHRDLKPQN 195
+Y E++ G +++ V + A C Y YQ+L A++Y H IIHRDLKP+N
Sbjct: 88 YYIVLELMEGGELFDKVVGNKRLKEATCKL----YFYQMLLAVQYLHENGIIHRDLKPEN 143
Query: 196 ILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEIL--LGAKVYSTTVDIW 250
+L++ + +K+ DFG S+ T T Y PE+L +G Y+ VD W
Sbjct: 144 VLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCW 202
Query: 251 SAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKK 310
S G I ++ F+ RT + + + G K +F P+
Sbjct: 203 SLGVILFICLSGYPPFSE----------HRTQVSLKDQITSG-------KYNFI---PEV 242
Query: 311 FSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQVEM 354
++E+ A+D+ K++ +DPK R + + L+H + +M
Sbjct: 243 WAEV----SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDM 282
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQ 82
EI +LK+L HP +I++ + + ++V E + +L D + + A K Y YQ
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQ 122
Query: 83 LLEALRYCHSRRIIHRDLKPQNILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
+L A++Y H IIHRDLKP+N+L++ + +K+ DFG S+ T T
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPT 181
Query: 140 YRPPEIL--LGAKVYSTTVDIWSAGCIF 165
Y PE+L +G Y+ VD WS G I
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 37/224 (16%)
Query: 139 WYRPPEILLGAKVYSTTVD---IWSAGCIFSEMSYLYQLLEALRYCHSRRIIHRDLKPQN 195
+Y E++ G +++ V + A C Y YQ+L A++Y H IIHRDLKP+N
Sbjct: 89 YYIVLELMEGGELFDKVVGNKRLKEATCKL----YFYQMLLAVQYLHENGIIHRDLKPEN 144
Query: 196 ILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEIL--LGAKVYSTTVDIW 250
+L++ + +K+ DFG S+ T T Y PE+L +G Y+ VD W
Sbjct: 145 VLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCW 203
Query: 251 SAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKK 310
S G I ++ F+ RT + + + G K +F P+
Sbjct: 204 SLGVILFICLSGYPPFSE----------HRTQVSLKDQITSG-------KYNFI---PEV 243
Query: 311 FSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQVEM 354
++E+ A+D+ K++ +DPK R + + L+H + +M
Sbjct: 244 WAEV----SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDM 283
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQ 82
EI +LK+L HP +I++ + + ++V E + +L D + + A K Y YQ
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQ 122
Query: 83 LLEALRYCHSRRIIHRDLKPQNILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
+L A++Y H IIHRDLKP+N+L++ + +K+ DFG S+ T T
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPT 181
Query: 140 YRPPEIL--LGAKVYSTTVDIWSAGCIF 165
Y PE+L +G Y+ VD WS G I
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 37/224 (16%)
Query: 139 WYRPPEILLGAKVYSTTVD---IWSAGCIFSEMSYLYQLLEALRYCHSRRIIHRDLKPQN 195
+Y E++ G +++ V + A C Y YQ+L A++Y H IIHRDLKP+N
Sbjct: 89 YYIVLELMEGGELFDKVVGNKRLKEATCKL----YFYQMLLAVQYLHENGIIHRDLKPEN 144
Query: 196 ILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEIL--LGAKVYSTTVDIW 250
+L++ + +K+ DFG S+ T T Y PE+L +G Y+ VD W
Sbjct: 145 VLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCW 203
Query: 251 SAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKK 310
S G I ++ F+ RT + + + G K +F P+
Sbjct: 204 SLGVILFICLSGYPPFSE----------HRTQVSLKDQITSG-------KYNFI---PEV 243
Query: 311 FSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQVEM 354
++E+ A+D+ K++ +DPK R + + L+H + +M
Sbjct: 244 WAEV----SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDM 283
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQ 82
EI +LK+L HP +I++ + + ++V E + +L D + + A K Y YQ
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQ 122
Query: 83 LLEALRYCHSRRIIHRDLKPQNILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
+L A++Y H IIHRDLKP+N+L++ + +K+ DFG S+ T T
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPT 181
Query: 140 YRPPEIL--LGAKVYSTTVDIWSAGCIF 165
Y PE+L +G Y+ VD WS G I
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 37/224 (16%)
Query: 139 WYRPPEILLGAKVYSTTVD---IWSAGCIFSEMSYLYQLLEALRYCHSRRIIHRDLKPQN 195
+Y E++ G +++ V + A C Y YQ+L A++Y H IIHRDLKP+N
Sbjct: 89 YYIVLELMEGGELFDKVVGNKRLKEATCKL----YFYQMLLAVQYLHENGIIHRDLKPEN 144
Query: 196 ILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEIL--LGAKVYSTTVDIW 250
+L++ + +K+ DFG S+ T T Y PE+L +G Y+ VD W
Sbjct: 145 VLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCW 203
Query: 251 SAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKK 310
S G I ++ F+ RT + + + G K +F P+
Sbjct: 204 SLGVILFICLSGYPPFSE----------HRTQVSLKDQITSG-------KYNFI---PEV 243
Query: 311 FSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQVEM 354
++E+ A+D+ K++ +DPK R + + L+H + +M
Sbjct: 244 WAEV----SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDM 283
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQ 82
EI +LK+L HP +I++ + + ++V E + +L D + + A K Y YQ
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQ 128
Query: 83 LLEALRYCHSRRIIHRDLKPQNILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
+L A++Y H IIHRDLKP+N+L++ + +K+ DFG S+ T T
Sbjct: 129 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPT 187
Query: 140 YRPPEIL--LGAKVYSTTVDIWSAGCIF 165
Y PE+L +G Y+ VD WS G I
Sbjct: 188 YLAPEVLVSVGTAGYNRAVDCWSLGVIL 215
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 37/224 (16%)
Query: 139 WYRPPEILLGAKVYSTTVD---IWSAGCIFSEMSYLYQLLEALRYCHSRRIIHRDLKPQN 195
+Y E++ G +++ V + A C Y YQ+L A++Y H IIHRDLKP+N
Sbjct: 95 YYIVLELMEGGELFDKVVGNKRLKEATCKL----YFYQMLLAVQYLHENGIIHRDLKPEN 150
Query: 196 ILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEIL--LGAKVYSTTVDIW 250
+L++ + +K+ DFG S+ T T Y PE+L +G Y+ VD W
Sbjct: 151 VLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCW 209
Query: 251 SAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKK 310
S G I ++ F+ RT + + + G K +F P+
Sbjct: 210 SLGVILFICLSGYPPFSE----------HRTQVSLKDQITSG-------KYNFI---PEV 249
Query: 311 FSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQVEM 354
++E+ A+D+ K++ +DPK R + + L+H + +M
Sbjct: 250 WAEV----SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDM 289
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 20 TALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKS 78
T +EI + L+HP ++ LHD D ++ +++EF+ +L + + + A
Sbjct: 200 TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE 259
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILIN--KSGALKLADFGLSRAFTIPMNRYTHEVV 136
Y+ Q+ + L + H +H DLKP+NI+ +S LKL DFGL+ A P
Sbjct: 260 YMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT-AHLDPKQSVKVTTG 318
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCI 164
T + PE+ G V T D+WS G +
Sbjct: 319 TAEFAAPEVAEGKPVGYYT-DMWSVGVL 345
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 83/205 (40%), Gaps = 29/205 (14%)
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRYCHSRRIIHRDLKPQNILIN--KS 201
E + G +++ D + + Y+ Q+ + L + H +H DLKP+NI+ +S
Sbjct: 234 EFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRS 293
Query: 202 GALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
LKL DFGL+ A P T + PE+ G V T D+WS G + +++
Sbjct: 294 NELKLIDFGLT-AHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT-DMWSVGVLSYILLS 351
Query: 262 KKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPL 321
+ F G+++ + L + + + G+S+
Sbjct: 352 GLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE-------------------------D 386
Query: 322 AVDVFSKIMALDPKQRVSAKTILQH 346
D K++ DP R++ L+H
Sbjct: 387 GKDFIRKLLLADPNTRMTIHQALEH 411
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 4/146 (2%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYLYQ 82
E+ ++++ H NV+ ++ V +L++V EFL L D + T + +
Sbjct: 92 EVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIATVCLS 149
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
+L AL Y H++ +IHRD+K +IL+ G +KL+DFG + + + V T ++
Sbjct: 150 VLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMA 209
Query: 143 PEILLGAKVYSTTVDIWSAGCIFSEM 168
PE+ + Y T VDIWS G + EM
Sbjct: 210 PEV-ISRLPYGTEVDIWSLGIMVIEM 234
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 174 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 233
+L AL Y H++ +IHRD+K +IL+ G +KL+DFG + + + V T ++
Sbjct: 150 VLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMA 209
Query: 234 PEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
PE+ + Y T VDIWS G + EMI + + + + + RI +L
Sbjct: 210 PEV-ISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSL 257
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQ 82
EI +LK+L HP +I++ + + ++V E + +L D + + A K Y YQ
Sbjct: 204 EIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQ 261
Query: 83 LLEALRYCHSRRIIHRDLKPQNILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
+L A++Y H IIHRDLKP+N+L++ + +K+ DFG S+ T T
Sbjct: 262 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPT 320
Query: 140 YRPPEIL--LGAKVYSTTVDIWSAGCIF 165
Y PE+L +G Y+ VD WS G I
Sbjct: 321 YLAPEVLVSVGTAGYNRAVDCWSLGVIL 348
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 37/224 (16%)
Query: 139 WYRPPEILLGAKVYSTTVD---IWSAGCIFSEMSYLYQLLEALRYCHSRRIIHRDLKPQN 195
+Y E++ G +++ V + A C Y YQ+L A++Y H IIHRDLKP+N
Sbjct: 228 YYIVLELMEGGELFDKVVGNKRLKEATCKL----YFYQMLLAVQYLHENGIIHRDLKPEN 283
Query: 196 ILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEIL--LGAKVYSTTVDIW 250
+L++ + +K+ DFG S+ T T Y PE+L +G Y+ VD W
Sbjct: 284 VLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCW 342
Query: 251 SAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKK 310
S G I ++ F+ RT + + + G K +F P+
Sbjct: 343 SLGVILFICLSGYPPFSE----------HRTQVSLKDQITSG-------KYNFI---PEV 382
Query: 311 FSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQVEM 354
++E+ A+D+ K++ +DPK R + + L+H + +M
Sbjct: 383 WAEV----SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDM 422
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPN+IRL V+ + +V E++ L FL+ L
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT---HEVV 136
+ ++Y +HRDL +NILIN + K++DFGLSR P YT ++
Sbjct: 154 RGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
W P I + +++ D+WS G + E MSY
Sbjct: 214 IRWTSPEAI--AYRKFTSASDVWSYGIVLWEVMSY 246
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT--- 223
+ L + ++Y +HRDL +NILIN + K++DFGLSR P YT
Sbjct: 150 VGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 210 GKIPIRWTSPEAI--AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 21/173 (12%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 261 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 320
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
Q+ A+ Y + IHR+L +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 321 ATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKF 378
Query: 140 ---YRPPEILLGAKVYSTTVDIWSAGCIFSE-------------MSYLYQLLE 176
+ PE L K +S D+W+ G + E +S +Y+LLE
Sbjct: 379 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 430
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW-- 230
Q+ A+ Y + IHR+L +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 323 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPI 380
Query: 231 -YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L K +S D+W+ G + E+ T
Sbjct: 381 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIAT 411
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 71/150 (47%), Gaps = 7/150 (4%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYLYQ 82
E ++ P V++L D L++V E++ DL + + VP A+ Y +
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAE 181
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP-MNRYTHEVVTLWYR 141
++ AL HS IHRD+KP N+L++KSG LKLADFG M R V T Y
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 241
Query: 142 PPEILL---GAKVYSTTVDIWSAGCIFSEM 168
PE+L G Y D WS G EM
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP-MNRYTHEVVT 228
Y +++ AL HS IHRD+KP N+L++KSG LKLADFG M R V T
Sbjct: 178 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 229 LWYRPPEILL---GAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
Y PE+L G Y D WS G EM+ T F DS + +I
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 290
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 28/177 (15%)
Query: 21 ALREISVLKELKHPNVIRLHD----------VIPVDFKLFLVFEFL---RQDLKDFL--Q 65
+RE+ L +L+HP ++R + + P K++L + +++LKD++ +
Sbjct: 50 VMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGR 109
Query: 66 TTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT 125
T ++ Q+ EA+ + HS+ ++HRDLKP NI +K+ DFGL A
Sbjct: 110 CTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD 169
Query: 126 ---------IPM---NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSY 170
PM R+T +V T Y PE + G YS VDI+S G I E+ Y
Sbjct: 170 QDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFELLY 225
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 25/189 (13%)
Query: 94 RIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVY- 152
R+ +R+L + ++ KL G+ R F + + T E L P++ L ++
Sbjct: 39 RLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTE--KLQPSSPKVYLYIQMQL 96
Query: 153 --STTVDIWSAG-CIFSE------MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA 203
+ W G C E + Q+ EA+ + HS+ ++HRDLKP NI
Sbjct: 97 CRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV 156
Query: 204 LKLADFGLSRAFT---------IPM---NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWS 251
+K+ DFGL A PM R+T +V T Y PE + G YS VDI+S
Sbjct: 157 VKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNS-YSHKVDIFS 215
Query: 252 AGCIFSEMI 260
G I E++
Sbjct: 216 LGLILFELL 224
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 71/150 (47%), Gaps = 7/150 (4%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYLYQ 82
E ++ P V++L D L++V E++ DL + + VP A+ Y +
Sbjct: 119 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAE 176
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP-MNRYTHEVVTLWYR 141
++ AL HS IHRD+KP N+L++KSG LKLADFG M R V T Y
Sbjct: 177 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 236
Query: 142 PPEILL---GAKVYSTTVDIWSAGCIFSEM 168
PE+L G Y D WS G EM
Sbjct: 237 SPEVLKSQGGDGYYGRECDWWSVGVFLYEM 266
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP-MNRYTHEVVT 228
Y +++ AL HS IHRD+KP N+L++KSG LKLADFG M R V T
Sbjct: 173 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 232
Query: 229 LWYRPPEILL---GAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
Y PE+L G Y D WS G EM+ T F DS + +I
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 285
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 21/173 (12%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +V+KE+KHPN+++L V + +++ EF+ +L D+L+ A+ Y+
Sbjct: 303 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 362
Query: 81 Y-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
Q+ A+ Y + IHR+L +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 363 ATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKF 420
Query: 140 ---YRPPEILLGAKVYSTTVDIWSAGCIFSE-------------MSYLYQLLE 176
+ PE L K +S D+W+ G + E +S +Y+LLE
Sbjct: 421 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 472
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW-- 230
Q+ A+ Y + IHR+L +N L+ ++ +K+ADFGLSR T + YT +
Sbjct: 365 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPI 422
Query: 231 -YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L K +S D+W+ G + E+ T
Sbjct: 423 KWTAPESLAYNK-FSIKSDVWAFGVLLWEIAT 453
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 71/150 (47%), Gaps = 7/150 (4%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYLYQ 82
E ++ P V++L D L++V E++ DL + + VP A+ Y +
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAE 181
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP-MNRYTHEVVTLWYR 141
++ AL HS IHRD+KP N+L++KSG LKLADFG M R V T Y
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 241
Query: 142 PPEILL---GAKVYSTTVDIWSAGCIFSEM 168
PE+L G Y D WS G EM
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP-MNRYTHEVVT 228
Y +++ AL HS IHRD+KP N+L++KSG LKLADFG M R V T
Sbjct: 178 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 229 LWYRPPEILL---GAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
Y PE+L G Y D WS G EM+ T F DS + +I
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 290
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFL 64
+ +SR GV + RE+S+L+++ H NVI LHDV + L+ E + +L DFL
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A S++ Q+L+ + Y H+++I H DLKP+NI++ +KL DFGL
Sbjct: 107 AQKE-SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ + + + T + PEI + + D+WS G I
Sbjct: 166 AHEIEDGV-EFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 207
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 35/196 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTH 224
S++ Q+L+ + Y H+++I H DLKP+NI++ +KL DFGL+ + + +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKN 177
Query: 225 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGT 284
T + PEI + + D+WS G I +++ + F GD++ + L
Sbjct: 178 IFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL--------- 227
Query: 285 PHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
+ + DF E E + LA D K++ + ++R++ + L
Sbjct: 228 ---------ANITSVSYDFDE-------EFFSHTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 345 QHEYF----NQVEMVK 356
+H + NQ MV+
Sbjct: 272 RHPWITPVDNQQAMVR 287
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQ 82
EI +LK+L HP +I++ + + ++V E + +L D + + A K Y YQ
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQ 247
Query: 83 LLEALRYCHSRRIIHRDLKPQNILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVTLW 139
+L A++Y H IIHRDLKP+N+L++ + +K+ DFG S+ T T
Sbjct: 248 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPT 306
Query: 140 YRPPEIL--LGAKVYSTTVDIWSAGCIF 165
Y PE+L +G Y+ VD WS G I
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVIL 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 37/224 (16%)
Query: 139 WYRPPEILLGAKVYSTTVD---IWSAGCIFSEMSYLYQLLEALRYCHSRRIIHRDLKPQN 195
+Y E++ G +++ V + A C Y YQ+L A++Y H IIHRDLKP+N
Sbjct: 214 YYIVLELMEGGELFDKVVGNKRLKEATCKL----YFYQMLLAVQYLHENGIIHRDLKPEN 269
Query: 196 ILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEIL--LGAKVYSTTVDIW 250
+L++ + +K+ DFG S+ T T Y PE+L +G Y+ VD W
Sbjct: 270 VLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVLVSVGTAGYNRAVDCW 328
Query: 251 SAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKK 310
S G I ++ F+ RT + + + G K +F P+
Sbjct: 329 SLGVILFICLSGYPPFSE----------HRTQVSLKDQITSG-------KYNFI---PEV 368
Query: 311 FSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQVEM 354
++E+ A+D+ K++ +DPK R + + L+H + +M
Sbjct: 369 WAEV----SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDM 408
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFL 64
+ +SR GV + RE+S+L+++ H NVI LHDV + L+ E + +L DFL
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A S++ Q+L+ + Y H+++I H DLKP+NI++ +KL DFGL
Sbjct: 107 AQKE-SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ + + + T + PEI + + D+WS G I
Sbjct: 166 AHEIEDGV-EFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 207
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 35/196 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTH 224
S++ Q+L+ + Y H+++I H DLKP+NI++ +KL DFGL+ + + +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKN 177
Query: 225 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGT 284
T + PEI + + D+WS G I +++ + F GD++ + L
Sbjct: 178 IFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL--------- 227
Query: 285 PHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
+ + DF E E + LA D K++ + ++R++ + L
Sbjct: 228 ---------ANITAVSYDFDE-------EFFSQTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 345 QHEYF----NQVEMVK 356
+H + NQ MV+
Sbjct: 272 RHPWITPVDNQQAMVR 287
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPN+IRL V+ + +V E++ L FL+ L
Sbjct: 82 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 141
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT---HEVV 136
+ ++Y +HRDL +NILIN + K++DFGLSR P YT ++
Sbjct: 142 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 201
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
W P I + +++ D+WS G + E MSY
Sbjct: 202 IRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSY 234
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT--- 223
+ L + ++Y +HRDL +NILIN + K++DFGLSR P YT
Sbjct: 138 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 197
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 198 GKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPN+IRL V+ + +V E++ L FL+ L
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNRYT---HEVV 136
+ ++Y +HRDL +NILIN + K++DFGLSR P YT ++
Sbjct: 125 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
W P I + +++ D+WS G + E MSY
Sbjct: 185 IRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSY 217
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNRYT--- 223
+ L + ++Y +HRDL +NILIN + K++DFGLSR P YT
Sbjct: 121 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 181 GKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMS 216
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFL 64
+ +SR GV + RE+S+L+++ H NVI LHDV + L+ E + +L DFL
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A S++ Q+L+ + Y H+++I H DLKP+NI++ +KL DFGL
Sbjct: 107 AQKE-SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ + + + T + PEI + + D+WS G I
Sbjct: 166 AHEIEDGV-EFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 207
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 35/196 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTH 224
S++ Q+L+ + Y H+++I H DLKP+NI++ +KL DFGL+ + + +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKN 177
Query: 225 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGT 284
T + PEI + + D+WS G I +++ + F GD++ + L
Sbjct: 178 IFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL--------- 227
Query: 285 PHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
+ + DF E E + LA D K++ + ++R++ + L
Sbjct: 228 ---------ANITSVSYDFDE-------EFFSHTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 345 QHEYF----NQVEMVK 356
+H + NQ MV+
Sbjct: 272 RHPWITPVDNQQAMVR 287
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 5 ESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFL 64
E +P R Q+ +RE+ VL E P ++ + D ++ + E + D +
Sbjct: 52 EIKPAIRNQI-------IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV 104
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRA 123
+P + +L L Y + +I+HRD+KP NIL+N G +KL DFG+S
Sbjct: 105 LKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 164
Query: 124 FTIPM-NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
M N + V T Y PE L G YS DIWS G E++
Sbjct: 165 LIDSMANSF---VGTRSYMAPERLQGTH-YSVQSDIWSMGLSLVELA 207
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 174 LLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRAFTIPM-NRYTHEVVTLWY 231
+L L Y + +I+HRD+KP NIL+N G +KL DFG+S M N + V T Y
Sbjct: 123 VLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF---VGTRSY 179
Query: 232 RPPEILLGAKVYSTTVDIWSAGCIFSEMITKK 263
PE L G YS DIWS G E+ +
Sbjct: 180 MAPERLQGTH-YSVQSDIWSMGLSLVELAVGR 210
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFL 64
+ +SR GV + RE+S+L+++ H NVI LHDV + L+ E + +L DFL
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A S++ Q+L+ + Y H+++I H DLKP+NI++ +KL DFGL
Sbjct: 107 AQKE-SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ + + + T + PEI + + D+WS G I
Sbjct: 166 AHEIEDGV-EFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 207
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 35/196 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTH 224
S++ Q+L+ + Y H+++I H DLKP+NI++ +KL DFGL+ + + +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKN 177
Query: 225 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGT 284
T + PEI + + D+WS G I +++ + F GD++ + L
Sbjct: 178 IFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL--------- 227
Query: 285 PHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
+ + DF E E + LA D K++ + ++R++ + L
Sbjct: 228 ---------ANITSVSYDFDE-------EFFSHTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 345 QHEYF----NQVEMVK 356
+H + NQ MV+
Sbjct: 272 RHPWITPVDNQQAMVR 287
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 9/164 (5%)
Query: 7 RPRSRVQVEGVPSTAL-REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFL 64
+ +SR GV + RE+S+L+++ H NVI LHDV + L+ E + +L DFL
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGL 120
+ A S++ Q+L+ + Y H+++I H DLKP+NI++ +KL DFGL
Sbjct: 107 AQKE-SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ + + + T + PEI + + D+WS G I
Sbjct: 166 AHEIEDGVE-FKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVI 207
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 35/196 (17%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA----LKLADFGLSRAFTIPMNRYTH 224
S++ Q+L+ + Y H+++I H DLKP+NI++ +KL DFGL+ + + +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKN 177
Query: 225 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGT 284
T + PEI + + D+WS G I +++ + F GD++ + L
Sbjct: 178 IFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL--------- 227
Query: 285 PHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
+ + DF E E + LA D K++ + ++R++ + L
Sbjct: 228 ---------ANITAVSYDFDE-------EFFSQTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 345 QHEYF----NQVEMVK 356
+H + NQ MV+
Sbjct: 272 RHPWITPVDNQQAMVR 287
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 77/151 (50%), Gaps = 10/151 (6%)
Query: 19 STALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAK 77
S+ EI+VLK++KH N++ L D+ +LV + + +L D + V A
Sbjct: 51 SSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKD-AS 109
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHE 134
+ Q+L A++Y H I+HRDLKP+N+L ++ + + DFGLS+ + N
Sbjct: 110 LVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK---MEQNGIMST 166
Query: 135 VV-TLWYRPPEILLGAKVYSTTVDIWSAGCI 164
T Y PE+ L K YS VD WS G I
Sbjct: 167 ACGTPGYVAPEV-LAQKPYSKAVDCWSIGVI 196
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVV-T 228
Q+L A++Y H I+HRDLKP+N+L ++ + + DFGLS+ + N T
Sbjct: 114 QVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK---MEQNGIMSTACGT 170
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCI 255
Y PE+ L K YS VD WS G I
Sbjct: 171 PGYVAPEV-LAQKPYSKAVDCWSIGVI 196
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 24 EISVLKELKHPNVIR-------LHDVIPVDFKLFLVFEF-----LRQDLKDFLQTTPVPV 71
EI ++K+L HPNV+ L + P D L L E+ LR+ L F +
Sbjct: 62 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKE 120
Query: 72 PPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGAL---KLADFGLSRAFTIPM 128
P ++ L + ALRY H RIIHRDLKP+NI++ K+ D G ++
Sbjct: 121 GPI--RTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QG 177
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSE 167
T V TL Y PE LL K Y+ TVD WS G + E
Sbjct: 178 ELCTEFVGTLQYLAPE-LLEQKKYTVTVDYWSFGTLAFE 215
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGAL---KLADFGLSRAFTIPMNRYTHE 225
+ L + ALRY H RIIHRDLKP+NI++ K+ D G ++ T
Sbjct: 125 TLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEF 183
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V TL Y PE LL K Y+ TVD WS G + E IT
Sbjct: 184 VGTLQYLAPE-LLEQKKYTVTVDYWSFGTLAFECIT 218
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 24 EISVLKELKHPNVIR-------LHDVIPVDFKLFLVFEF-----LRQDLKDFLQTTPVPV 71
EI ++K+L HPNV+ L + P D L L E+ LR+ L F +
Sbjct: 63 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKE 121
Query: 72 PPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGAL---KLADFGLSRAFTIPM 128
P ++ L + ALRY H RIIHRDLKP+NI++ K+ D G ++
Sbjct: 122 GPI--RTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QG 178
Query: 129 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSE 167
T V TL Y PE LL K Y+ TVD WS G + E
Sbjct: 179 ELCTEFVGTLQYLAPE-LLEQKKYTVTVDYWSFGTLAFE 216
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGAL---KLADFGLSRAFTIPMNRYTHE 225
+ L + ALRY H RIIHRDLKP+NI++ K+ D G ++ T
Sbjct: 126 TLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEF 184
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V TL Y PE LL K Y+ TVD WS G + E IT
Sbjct: 185 VGTLQYLAPE-LLEQKKYTVTVDYWSFGTLAFECIT 219
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPN+IRL V+ + +V E++ L FL+ L
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT---HEVV 136
+ ++Y +HRDL +NILIN + K++DFGLSR P YT ++
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
W P I + +++ D+WS G + E MSY
Sbjct: 214 IRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSY 246
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT--- 223
+ L + ++Y +HRDL +NILIN + K++DFGLSR P YT
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 210 GKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPN+IRL V+ + +V E++ L FL+ L
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT---HEVV 136
+ ++Y +HRDL +NILIN + K++DFGLSR P YT ++
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
W P I + +++ D+WS G + E MSY
Sbjct: 214 IRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSY 246
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT--- 223
+ L + ++Y +HRDL +NILIN + K++DFGLSR P YT
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 210 GKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMS 245
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 23 REISVLKELKHPN--VIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYL 80
EI+ L +L+ + +IRL+D D +++V E DL +L+ + P KSY
Sbjct: 103 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYW 161
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT--HEVVTL 138
+LEA+ H I+H DLKP N LI G LKL DFG++ +V T+
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 220
Query: 139 WYRPPEIL----------LGAKVYSTTVDIWSAGCIFSEMSY 170
Y PPE + S D+WS GCI M+Y
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 262
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 78/192 (40%), Gaps = 39/192 (20%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT--HEV 226
SY +LEA+ H I+H DLKP N LI G LKL DFG++ +V
Sbjct: 159 SYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQV 217
Query: 227 VTLWYRPPEIL----------LGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLF 276
T+ Y PPE + S D+WS GCI M KT F I+Q+
Sbjct: 218 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQIS 275
Query: 277 RIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQ 336
++ + HE +FP+ +P+ DV + DPKQ
Sbjct: 276 KLHAIIDPNHE-------------IEFPD-----------IPEKDLQDVLKCCLKRDPKQ 311
Query: 337 RVSAKTILQHEY 348
R+S +L H Y
Sbjct: 312 RISIPELLAHPY 323
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 23 REISVLKELKHPN--VIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYL 80
EI+ L +L+ + +IRL+D D +++V E DL +L+ + P KSY
Sbjct: 75 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYW 133
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT--HEVVTL 138
+LEA+ H I+H DLKP N LI G LKL DFG++ +V T+
Sbjct: 134 KNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 192
Query: 139 WYRPPEIL----------LGAKVYSTTVDIWSAGCIFSEMSY 170
Y PPE + S D+WS GCI M+Y
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 234
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 78/192 (40%), Gaps = 39/192 (20%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT--HEV 226
SY +LEA+ H I+H DLKP N LI G LKL DFG++ +V
Sbjct: 131 SYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQV 189
Query: 227 VTLWYRPPEIL----------LGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLF 276
T+ Y PPE + S D+WS GCI M KT F I+Q+
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQIS 247
Query: 277 RIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQ 336
++ + HE +FP+ +P+ DV + DPKQ
Sbjct: 248 KLHAIIDPNHE-------------IEFPD-----------IPEKDLQDVLKCCLKRDPKQ 283
Query: 337 RVSAKTILQHEY 348
R+S +L H Y
Sbjct: 284 RISIPELLAHPY 295
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 23 REISVLKELKH--PNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYL 80
EI+ L +L+ +IRL+D D +++V E DL +L+ + P KSY
Sbjct: 103 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYW 161
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT--HEVVTL 138
+LEA+ H I+H DLKP N LI G LKL DFG++ +V T+
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 220
Query: 139 WYRPPEIL----------LGAKVYSTTVDIWSAGCIFSEMSY 170
Y PPE + S D+WS GCI M+Y
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 262
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 78/192 (40%), Gaps = 39/192 (20%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT--HEV 226
SY +LEA+ H I+H DLKP N LI G LKL DFG++ +V
Sbjct: 159 SYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQV 217
Query: 227 VTLWYRPPEIL----------LGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLF 276
T+ Y PPE + S D+WS GCI M KT F I+Q+
Sbjct: 218 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQIS 275
Query: 277 RIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQ 336
++ + HE +FP+ +P+ DV + DPKQ
Sbjct: 276 KLHAIIDPNHE-------------IEFPD-----------IPEKDLQDVLKCCLKRDPKQ 311
Query: 337 RVSAKTILQHEY 348
R+S +L H Y
Sbjct: 312 RISIPELLAHPY 323
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPN+IRL V+ + +V E++ L FL+ L
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT---HEVV 136
+ ++Y +HRDL +NILIN + K++DFGLSR P YT ++
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
W P I + +++ D+WS G + E MSY
Sbjct: 214 IRWTSPEAI--AYRKFTSASDVWSYGIVLWEVMSY 246
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT--- 223
+ L + ++Y +HRDL +NILIN + K++DFGLSR P YT
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 210 GKIPIRWTSPEAI--AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 23 REISVLKELKHPN--VIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYL 80
EI+ L +L+ + +IRL+D D +++V E DL +L+ + P KSY
Sbjct: 56 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYW 114
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTH--EVVTL 138
+LEA+ H I+H DLKP N LI G LKL DFG++ +V T+
Sbjct: 115 KNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 173
Query: 139 WYRPPEIL----------LGAKVYSTTVDIWSAGCIFSEMSY 170
Y PPE + S D+WS GCI M+Y
Sbjct: 174 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 215
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 78/192 (40%), Gaps = 39/192 (20%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTH--EV 226
SY +LEA+ H I+H DLKP N LI G LKL DFG++ +V
Sbjct: 112 SYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQV 170
Query: 227 VTLWYRPPEIL----------LGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLF 276
T+ Y PPE + S D+WS GCI M KT F I+Q+
Sbjct: 171 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQIS 228
Query: 277 RIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQ 336
++ + HE +FP+ +P+ DV + DPKQ
Sbjct: 229 KLHAIIDPNHE-------------IEFPD-----------IPEKDLQDVLKCCLKRDPKQ 264
Query: 337 RVSAKTILQHEY 348
R+S +L H Y
Sbjct: 265 RISIPELLAHPY 276
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPN+IRL V+ + +V E++ L FL+ L
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT---HEVV 136
+ ++Y +HRDL +NILIN + K++DFGLSR P YT ++
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
W P I + +++ D+WS G + E MSY
Sbjct: 214 IRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSY 246
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT--- 223
+ L + ++Y +HRDL +NILIN + K++DFGLSR P YT
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 210 GKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMS 245
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 23 REISVLKELKHPN--VIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYL 80
EI+ L +L+ + +IRL+D D +++V E DL +L+ + P KSY
Sbjct: 55 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYW 113
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTH--EVVTL 138
+LEA+ H I+H DLKP N LI G LKL DFG++ +V T+
Sbjct: 114 KNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 172
Query: 139 WYRPPEIL----------LGAKVYSTTVDIWSAGCIFSEMSY 170
Y PPE + S D+WS GCI M+Y
Sbjct: 173 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 214
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 78/192 (40%), Gaps = 39/192 (20%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTH--EV 226
SY +LEA+ H I+H DLKP N LI G LKL DFG++ +V
Sbjct: 111 SYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQV 169
Query: 227 VTLWYRPPEIL----------LGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLF 276
T+ Y PPE + S D+WS GCI M KT F I+Q+
Sbjct: 170 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQIS 227
Query: 277 RIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQ 336
++ + HE +FP+ +P+ DV + DPKQ
Sbjct: 228 KLHAIIDPNHE-------------IEFPD-----------IPEKDLQDVLKCCLKRDPKQ 263
Query: 337 RVSAKTILQHEY 348
R+S +L H Y
Sbjct: 264 RISIPELLAHPY 275
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 23 REISVLKELKHPN--VIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYL 80
EI+ L +L+ + +IRL+D D +++V E DL +L+ + P KSY
Sbjct: 59 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYW 117
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTH--EVVTL 138
+LEA+ H I+H DLKP N LI G LKL DFG++ +V T+
Sbjct: 118 KNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 176
Query: 139 WYRPPEIL----------LGAKVYSTTVDIWSAGCIFSEMSY 170
Y PPE + S D+WS GCI M+Y
Sbjct: 177 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 218
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 78/192 (40%), Gaps = 39/192 (20%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTH--EV 226
SY +LEA+ H I+H DLKP N LI G LKL DFG++ +V
Sbjct: 115 SYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQV 173
Query: 227 VTLWYRPPEIL----------LGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLF 276
T+ Y PPE + S D+WS GCI M KT F I+Q+
Sbjct: 174 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQIS 231
Query: 277 RIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQ 336
++ + HE +FP+ +P+ DV + DPKQ
Sbjct: 232 KLHAIIDPNHE-------------IEFPD-----------IPEKDLQDVLKCCLKRDPKQ 267
Query: 337 RVSAKTILQHEY 348
R+S +L H Y
Sbjct: 268 RISIPELLAHPY 279
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPN+IRL V+ + +V E++ L FL+ L
Sbjct: 92 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 151
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT---HEVV 136
+ ++Y +HRDL +NILIN + K++DFGLSR P YT ++
Sbjct: 152 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 211
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
W P I + +++ D+WS G + E MSY
Sbjct: 212 IRWTSPEAI--AYRKFTSASDVWSYGIVLWEVMSY 244
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT--- 223
+ L + ++Y +HRDL +NILIN + K++DFGLSR P YT
Sbjct: 148 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 207
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 208 GKIPIRWTSPEAI--AYRKFTSASDVWSYGIVLWEVMS 243
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 80/180 (44%), Gaps = 28/180 (15%)
Query: 19 STALREISVLKELKHPNVIRLH-------------DVIPVDFKLFLVFEFL-RQDLKDFL 64
ST L E+ +L L H V+R + + LF+ E+ + L D +
Sbjct: 47 STILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLI 106
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLS--- 121
+ + Q+LEAL Y HS+ IIHR+LKP NI I++S +K+ DFGL+
Sbjct: 107 HSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNV 166
Query: 122 -RAFTI----------PMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSY 170
R+ I + T + T Y E+L G Y+ +D +S G IF E Y
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY 226
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLS----RAFTI----------P 218
Q+LEAL Y HS+ IIHR+LKP NI I++S +K+ DFGL+ R+ I
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 219 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMI 260
+ T + T Y E+L G Y+ +D +S G IF E I
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 26/171 (15%)
Query: 21 ALREISVLKELK-HPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPP-ALAKS 78
AL EI +L E HPNVIR + D L++ E +L+D +++ V L K
Sbjct: 73 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE 132
Query: 79 Y-----LYQLLEALRYCHSRRIIHRDLKPQNILINKS---------GALKL----ADFGL 120
Y L Q+ + + HS +IIHRDLKPQNIL++ S GA L +DFGL
Sbjct: 133 YNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 121 SRAFTIPMNRYTHEV----VTLWYRPPEILLGA--KVYSTTVDIWSAGCIF 165
+ + + T +R PE+L + + + ++DI+S GC+F
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 19/124 (15%)
Query: 165 FSEMSYLYQLLEALRYCHSRRIIHRDLKPQNILINKS---------GALKL----ADFGL 211
++ +S L Q+ + + HS +IIHRDLKPQNIL++ S GA L +DFGL
Sbjct: 133 YNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 212 SRAFTIPMNRYTHEV----VTLWYRPPEILLGA--KVYSTTVDIWSAGCIFSEMITKKTL 265
+ + + T +R PE+L + + + ++DI+S GC+F +++K
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 266 FAGD 269
GD
Sbjct: 253 PFGD 256
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 15 EGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPP 73
E T L+E+ V++ L+HPNV++ V+ D +L + E+++ L+ +++ P
Sbjct: 48 EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPW 107
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF----TIPMN 129
+ S+ + + Y HS IIHRDL N L+ ++ + +ADFGL+R T P
Sbjct: 108 SQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG 167
Query: 130 -----------RYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
RYT W P ++ + Y VD++S G + E+
Sbjct: 168 LRSLKKPDRKKRYTVVGNPYWMAPE--MINGRSYDEKVDVFSFGIVLCEI 215
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 17/110 (15%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF----TIPMN--- 220
+S+ + + Y HS IIHRDL N L+ ++ + +ADFGL+R T P
Sbjct: 111 VSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRS 170
Query: 221 --------RYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITK 262
RYT W P ++ + Y VD++S G + E+I +
Sbjct: 171 LKKPDRKKRYTVVGNPYWMAPE--MINGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 7/151 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
+ E V+ +L HP +++L+ V + LVFEF+ L D+L+T
Sbjct: 50 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 109
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+ E + Y +IHRDL +N L+ ++ +K++DFG++R F + ++YT T +
Sbjct: 110 LDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFP 167
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ PE+ ++ YS+ D+WS G + E+
Sbjct: 168 VKWASPEVFSFSR-YSSKSDVWSFGVLMWEV 197
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 174 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW--- 230
+ E + Y +IHRDL +N L+ ++ +K++DFG++R F + ++YT T +
Sbjct: 112 VCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFPVK 169
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL 265
+ PE+ ++ YS+ D+WS G + E+ ++ +
Sbjct: 170 WASPEVFSFSR-YSSKSDVWSFGVLMWEVFSEGKI 203
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 26/171 (15%)
Query: 21 ALREISVLKELK-HPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPP-ALAKS 78
AL EI +L E HPNVIR + D L++ E +L+D +++ V L K
Sbjct: 73 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE 132
Query: 79 Y-----LYQLLEALRYCHSRRIIHRDLKPQNILINKS---------GALKL----ADFGL 120
Y L Q+ + + HS +IIHRDLKPQNIL++ S GA L +DFGL
Sbjct: 133 YNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 121 SRAFTIPMNRYTHEV----VTLWYRPPEILLGA--KVYSTTVDIWSAGCIF 165
+ + + T +R PE+L + + + ++DI+S GC+F
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 19/124 (15%)
Query: 165 FSEMSYLYQLLEALRYCHSRRIIHRDLKPQNILINKS---------GALKL----ADFGL 211
++ +S L Q+ + + HS +IIHRDLKPQNIL++ S GA L +DFGL
Sbjct: 133 YNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 212 SRAFTIPMNRYTHEV----VTLWYRPPEILLGA--KVYSTTVDIWSAGCIFSEMITKKTL 265
+ + + T +R PE+L + + + ++DI+S GC+F +++K
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 266 FAGD 269
GD
Sbjct: 253 PFGD 256
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 23 REISVLKELKHPN--VIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYL 80
EI+ L +L+ + +IRL+D D +++V E DL +L+ + P KSY
Sbjct: 75 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYW 133
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT--HEVVTL 138
+LEA+ H I+H DLKP N LI G LKL DFG++ +V T+
Sbjct: 134 KNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTV 192
Query: 139 WYRPPEIL----------LGAKVYSTTVDIWSAGCIFSEMSY 170
Y PPE + S D+WS GCI M+Y
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 234
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 78/192 (40%), Gaps = 39/192 (20%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT--HEV 226
SY +LEA+ H I+H DLKP N LI G LKL DFG++ +V
Sbjct: 131 SYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQV 189
Query: 227 VTLWYRPPEIL----------LGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLF 276
T+ Y PPE + S D+WS GCI M KT F I+Q+
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQIS 247
Query: 277 RIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQ 336
++ + HE +FP+ +P+ DV + DPKQ
Sbjct: 248 KLHAIIDPNHE-------------IEFPD-----------IPEKDLQDVLKCCLKRDPKQ 283
Query: 337 RVSAKTILQHEY 348
R+S +L H Y
Sbjct: 284 RISIPELLAHPY 295
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 84/175 (48%), Gaps = 30/175 (17%)
Query: 21 ALREISVLKELK-HPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPP-ALAKS 78
AL EI +L E HPNVIR + D L++ E +L+D +++ V L K
Sbjct: 55 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE 114
Query: 79 Y-----LYQLLEALRYCHSRRIIHRDLKPQNILINKS---------GALKL----ADFGL 120
Y L Q+ + + HS +IIHRDLKPQNIL++ S GA L +DFGL
Sbjct: 115 YNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 121 SRAFTIPMNRYTHEVV----TLWYRPPEILLGAKVYST------TVDIWSAGCIF 165
+ + + + T +R PE+L + T ++DI+S GC+F
Sbjct: 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 23/128 (17%)
Query: 165 FSEMSYLYQLLEALRYCHSRRIIHRDLKPQNILINKS---------GALKL----ADFGL 211
++ +S L Q+ + + HS +IIHRDLKPQNIL++ S GA L +DFGL
Sbjct: 115 YNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 212 SRAFTIPMNRYTHEVV----TLWYRPPEILLGAKVYST------TVDIWSAGCIFSEMIT 261
+ + + + T +R PE+L + T ++DI+S GC+F +++
Sbjct: 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 262 KKTLFAGD 269
K GD
Sbjct: 235 KGKHPFGD 242
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 4/146 (2%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYLYQ 82
E+ ++++ +H NV+ +++ V +L++V EFL L D + T + A
Sbjct: 67 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA--VCLA 124
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
+L+AL H++ +IHRD+K +IL+ G +KL+DFG + + R V T ++
Sbjct: 125 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 184
Query: 143 PEILLGAKVYSTTVDIWSAGCIFSEM 168
PE L+ Y VDIWS G + EM
Sbjct: 185 PE-LISRLPYGPEVDIWSLGIMVIEM 209
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 27/176 (15%)
Query: 174 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 233
+L+AL H++ +IHRD+K +IL+ G +KL+DFG + + R V T ++
Sbjct: 125 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 184
Query: 234 PEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGV 293
PE L+ Y VDIWS G + EM+ G P P +
Sbjct: 185 PE-LISRLPYGPEVDIWSLGIMVIEMVD---------------------GEPPYFNEPPL 222
Query: 294 SKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYF 349
+ + + + P R K ++ P +++ DP QR +A +L+H +
Sbjct: 223 KAMKMIRDNLPP-RLKNLHKV----SPSLKGFLDRLLVRDPAQRATAAELLKHPFL 273
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 4/146 (2%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYLYQ 82
E+ ++++ +H NV+ +++ V +L++V EFL L D + T + A
Sbjct: 71 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA--VCLA 128
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
+L+AL H++ +IHRD+K +IL+ G +KL+DFG + + R V T ++
Sbjct: 129 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 188
Query: 143 PEILLGAKVYSTTVDIWSAGCIFSEM 168
PE L+ Y VDIWS G + EM
Sbjct: 189 PE-LISRLPYGPEVDIWSLGIMVIEM 213
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 27/176 (15%)
Query: 174 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 233
+L+AL H++ +IHRD+K +IL+ G +KL+DFG + + R V T ++
Sbjct: 129 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 188
Query: 234 PEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGV 293
PE L+ Y VDIWS G + EM+ G P P +
Sbjct: 189 PE-LISRLPYGPEVDIWSLGIMVIEMVD---------------------GEPPYFNEPPL 226
Query: 294 SKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYF 349
+ + + + P R K ++ P +++ DP QR +A +L+H +
Sbjct: 227 KAMKMIRDNLPP-RLKNLHKV----SPSLKGFLDRLLVRDPAQRATAAELLKHPFL 277
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 4/146 (2%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYLYQ 82
E+ ++++ +H NV+ +++ V +L++V EFL L D + T + A
Sbjct: 78 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA--VCLA 135
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
+L+AL H++ +IHRD+K +IL+ G +KL+DFG + + R V T ++
Sbjct: 136 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 195
Query: 143 PEILLGAKVYSTTVDIWSAGCIFSEM 168
PE L+ Y VDIWS G + EM
Sbjct: 196 PE-LISRLPYGPEVDIWSLGIMVIEM 220
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 27/176 (15%)
Query: 174 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 233
+L+AL H++ +IHRD+K +IL+ G +KL+DFG + + R V T ++
Sbjct: 136 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 195
Query: 234 PEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGV 293
PE L+ Y VDIWS G + EM+ G P P +
Sbjct: 196 PE-LISRLPYGPEVDIWSLGIMVIEMVD---------------------GEPPYFNEPPL 233
Query: 294 SKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYF 349
+ + + + P R K ++ P +++ DP QR +A +L+H +
Sbjct: 234 KAMKMIRDNLPP-RLKNLHKV----SPSLKGFLDRLLVRDPAQRATAAELLKHPFL 284
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 4/146 (2%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYLYQ 82
E+ ++++ +H NV+ +++ V +L++V EFL L D + T + A
Sbjct: 76 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA--VCLA 133
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
+L+AL H++ +IHRD+K +IL+ G +KL+DFG + + R V T ++
Sbjct: 134 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 193
Query: 143 PEILLGAKVYSTTVDIWSAGCIFSEM 168
PE L+ Y VDIWS G + EM
Sbjct: 194 PE-LISRLPYGPEVDIWSLGIMVIEM 218
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 27/176 (15%)
Query: 174 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 233
+L+AL H++ +IHRD+K +IL+ G +KL+DFG + + R V T ++
Sbjct: 134 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 193
Query: 234 PEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGV 293
PE L+ Y VDIWS G + EM+ G P P +
Sbjct: 194 PE-LISRLPYGPEVDIWSLGIMVIEMVD---------------------GEPPYFNEPPL 231
Query: 294 SKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYF 349
+ + + + P R K ++ P +++ DP QR +A +L+H +
Sbjct: 232 KAMKMIRDNLPP-RLKNLHKV----SPSLKGFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 39/178 (21%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQT--------------- 66
RE +++ E +PN+++L V V + L+FE++ DL +FL++
Sbjct: 99 REAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS 158
Query: 67 ------TPVPVPPALAKSYLY--QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
+P P P + A+ Q+ + Y R+ +HRDL +N L+ ++ +K+ADF
Sbjct: 159 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADF 218
Query: 119 GLSRAFTIPMNRYT--------HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GLSR N Y+ ++ + + + PPE + + Y+T D+W+ G + E+
Sbjct: 219 GLSR------NIYSADYYKADGNDAIPIRWMPPESIFYNR-YTTESDVWAYGVVLWEI 269
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 15/97 (15%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT--------H 224
Q+ + Y R+ +HRDL +N L+ ++ +K+ADFGLSR N Y+ +
Sbjct: 182 QVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR------NIYSADYYKADGN 235
Query: 225 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ + + + PPE + + Y+T D+W+ G + E+ +
Sbjct: 236 DAIPIRWMPPESIFYNR-YTTESDVWAYGVVLWEIFS 271
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 84/158 (53%), Gaps = 13/158 (8%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALA 76
P L E +++K+L+H ++RL+ V+ + ++++ E++ L DFL+T P + +
Sbjct: 48 PDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKT-PSGIKLTIN 105
Query: 77 K--SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT-- 132
K Q+ E + + R IHR+L+ NIL++ + + K+ADFGL+R I N YT
Sbjct: 106 KLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAR 163
Query: 133 --HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ W P I G ++ D+WS G + +E+
Sbjct: 164 EGAKFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEI 199
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ E + + R IHR+L+ NIL++ + + K+ADFGL+R I N YT +
Sbjct: 113 QIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPI 170
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
W P I G ++ D+WS G + +E++T
Sbjct: 171 KWTAPEAINYG--TFTIKSDVWSFGILLTEIVT 201
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++L+ PP +
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR---PPGME 141
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
SY YQL + Y S++ IHRDL +N+L+ ++ +K+ADF
Sbjct: 142 XSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 119 GLSRAFTI--PMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L +VY+ D+WS G + E+
Sbjct: 202 GLARDINNIDXXKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEI 252
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI--PMNRYTHE 225
+S YQL + Y S++ IHRDL +N+L+ ++ +K+ADFGL+R + T+
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L +VY+ D+WS G + E+ T +++LF++ +
Sbjct: 220 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 4/146 (2%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYLYQ 82
E+ ++++ +H NV+ +++ V +L++V EFL L D + T + A
Sbjct: 198 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA--VCLA 255
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
+L+AL H++ +IHRD+K +IL+ G +KL+DFG + + R V T ++
Sbjct: 256 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 315
Query: 143 PEILLGAKVYSTTVDIWSAGCIFSEM 168
PE L+ Y VDIWS G + EM
Sbjct: 316 PE-LISRLPYGPEVDIWSLGIMVIEM 340
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 41/236 (17%)
Query: 128 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSY-----------LYQLLE 176
M Y HE V Y L+G +++ ++ G + +++ +L+
Sbjct: 202 MRDYQHENVVEMYN--SYLVGDELW-VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQ 258
Query: 177 ALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEI 236
AL H++ +IHRD+K +IL+ G +KL+DFG + + R V T ++ PE
Sbjct: 259 ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE- 317
Query: 237 LLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKL 296
L+ Y VDIWS G + EM+ G P P + +
Sbjct: 318 LISRLPYGPEVDIWSLGIMVIEMVD---------------------GEPPYFNEPPLKAM 356
Query: 297 PIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQV 352
+ + + P R K ++ P +++ DP QR +A +L+H + +
Sbjct: 357 KMIRDNLPP-RLKNLHKV----SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 407
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 7/151 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
+ E V+ +L HP +++L+ V + LVFEF+ L D+L+T
Sbjct: 53 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 112
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+ E + Y +IHRDL +N L+ ++ +K++DFG++R F + ++YT T +
Sbjct: 113 LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFP 170
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ PE+ ++ YS+ D+WS G + E+
Sbjct: 171 VKWASPEVFSFSR-YSSKSDVWSFGVLMWEV 200
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 174 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW--- 230
+ E + Y +IHRDL +N L+ ++ +K++DFG++R F + ++YT T +
Sbjct: 115 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFPVK 172
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL 265
+ PE+ ++ YS+ D+WS G + E+ ++ +
Sbjct: 173 WASPEVFSFSR-YSSKSDVWSFGVLMWEVFSEGKI 206
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 4/146 (2%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYLYQ 82
E+ ++++ +H NV+ +++ V +L++V EFL L D + T + A
Sbjct: 121 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA--VCLA 178
Query: 83 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
+L+AL H++ +IHRD+K +IL+ G +KL+DFG + + R V T ++
Sbjct: 179 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 238
Query: 143 PEILLGAKVYSTTVDIWSAGCIFSEM 168
PE L+ Y VDIWS G + EM
Sbjct: 239 PE-LISRLPYGPEVDIWSLGIMVIEM 263
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 27/176 (15%)
Query: 174 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 233
+L+AL H++ +IHRD+K +IL+ G +KL+DFG + + R V T ++
Sbjct: 179 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 238
Query: 234 PEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGV 293
PE L+ Y VDIWS G + EM+ G P P +
Sbjct: 239 PE-LISRLPYGPEVDIWSLGIMVIEMVD---------------------GEPPYFNEPPL 276
Query: 294 SKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYF 349
+ + + + P R K ++ P +++ DP QR +A +L+H +
Sbjct: 277 KAMKMIRDNLPP-RLKNLHKV----SPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 84/188 (44%), Gaps = 32/188 (17%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILI--NKSGALKLADFGLSRAFTIPMN----RYTH 224
+ Q+ AL Y H++ I HRD+KP+N L NKS +KL DFGLS+ F N T
Sbjct: 174 MRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTT 233
Query: 225 EVVTLWYRPPEIL-LGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLG 283
+ T ++ PE+L + Y D WSAG + ++ F G ++ D + ++
Sbjct: 234 KAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLN--- 290
Query: 284 TPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
KL ++ N+ PLA D+ S ++ + +R A
Sbjct: 291 ----------KKLCFENPNY------------NVLSPLARDLLSNLLNRNVDERFDAMRA 328
Query: 344 LQHEYFNQ 351
LQH + +Q
Sbjct: 329 LQHPWISQ 336
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 79/189 (41%), Gaps = 47/189 (24%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-----------------LKDFLQT 66
E+ ++K+L HPN+ RL++V + + LV E D ++T
Sbjct: 78 EVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKT 137
Query: 67 TPVPVPPA-----------------------LAKSYLYQLLEALRYCHSRRIIHRDLKPQ 103
P P L + + Q+ AL Y H++ I HRD+KP+
Sbjct: 138 QICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPE 197
Query: 104 NILI--NKSGALKLADFGLSRAFTIPMN----RYTHEVVTLWYRPPEIL-LGAKVYSTTV 156
N L NKS +KL DFGLS+ F N T + T ++ PE+L + Y
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257
Query: 157 DIWSAGCIF 165
D WSAG +
Sbjct: 258 DAWSAGVLL 266
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 7/151 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
+ E V+ +L HP +++L+ V + LVFEF+ L D+L+T
Sbjct: 50 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 109
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+ E + Y +IHRDL +N L+ ++ +K++DFG++R F + ++YT T +
Sbjct: 110 LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFP 167
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ PE+ ++ YS+ D+WS G + E+
Sbjct: 168 VKWASPEVFSFSR-YSSKSDVWSFGVLMWEV 197
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 174 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW--- 230
+ E + Y +IHRDL +N L+ ++ +K++DFG++R F + ++YT T +
Sbjct: 112 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFPVK 169
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL 265
+ PE+ ++ YS+ D+WS G + E+ ++ +
Sbjct: 170 WASPEVFSFSR-YSSKSDVWSFGVLMWEVFSEGKI 203
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPN+IRL V+ + +V E++ L FL+ L
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT---HEVV 136
+ ++Y +HRDL +NILIN + K++DFGL+R P YT ++
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIP 213
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
W P I + +++ D+WS G + E MSY
Sbjct: 214 IRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSY 246
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT--- 223
+ L + ++Y +HRDL +NILIN + K++DFGL+R P YT
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRG 209
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 210 GKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMS 245
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 83/175 (47%), Gaps = 30/175 (17%)
Query: 21 ALREISVLKELK-HPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPP-ALAKS 78
AL EI +L E HPNVIR + D L++ E +L+D +++ V L K
Sbjct: 55 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE 114
Query: 79 Y-----LYQLLEALRYCHSRRIIHRDLKPQNILINKS---------GALKL----ADFGL 120
Y L Q+ + + HS +IIHRDLKPQNIL++ S GA L +DFGL
Sbjct: 115 YNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 121 SRAFTIPMNRYTHEVV----TLWYRPPEILLGAKVYST------TVDIWSAGCIF 165
+ + + T +R PE+L + T ++DI+S GC+F
Sbjct: 175 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 23/128 (17%)
Query: 165 FSEMSYLYQLLEALRYCHSRRIIHRDLKPQNILINKS---------GALKL----ADFGL 211
++ +S L Q+ + + HS +IIHRDLKPQNIL++ S GA L +DFGL
Sbjct: 115 YNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 212 SRAFTIPMNRYTHEVV----TLWYRPPEILLGAKVYST------TVDIWSAGCIFSEMIT 261
+ + + T +R PE+L + T ++DI+S GC+F +++
Sbjct: 175 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 262 KKTLFAGD 269
K GD
Sbjct: 235 KGKHPFGD 242
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 7/151 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
+ E V+ +L HP +++L+ V + LVFEF+ L D+L+T
Sbjct: 48 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 107
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+ E + Y +IHRDL +N L+ ++ +K++DFG++R F + ++YT T +
Sbjct: 108 LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFP 165
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ PE+ ++ YS+ D+WS G + E+
Sbjct: 166 VKWASPEVFSFSR-YSSKSDVWSFGVLMWEV 195
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 174 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW--- 230
+ E + Y +IHRDL +N L+ ++ +K++DFG++R F + ++YT T +
Sbjct: 110 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFPVK 167
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL 265
+ PE+ ++ YS+ D+WS G + E+ ++ +
Sbjct: 168 WASPEVFSFSR-YSSKSDVWSFGVLMWEVFSEGKI 201
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 7/151 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
+ E V+ +L HP +++L+ V + LVFEF+ L D+L+T
Sbjct: 70 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 129
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+ E + Y +IHRDL +N L+ ++ +K++DFG++R F + ++YT T +
Sbjct: 130 LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFP 187
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ PE+ ++ YS+ D+WS G + E+
Sbjct: 188 VKWASPEVFSFSR-YSSKSDVWSFGVLMWEV 217
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 174 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW--- 230
+ E + Y +IHRDL +N L+ ++ +K++DFG++R F + ++YT T +
Sbjct: 132 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFPVK 189
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL 265
+ PE+ ++ YS+ D+WS G + E+ ++ +
Sbjct: 190 WASPEVFSFSR-YSSKSDVWSFGVLMWEVFSEGKI 223
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +K+ADFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +K+ADFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPN+IRL V+ + +V E++ L FL+ L
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT---HEVV 136
+ ++Y +HRDL +NILIN + K++DFGL R P YT ++
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIP 213
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
W P I + +++ D+WS G + E MSY
Sbjct: 214 IRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSY 246
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT--- 223
+ L + ++Y +HRDL +NILIN + K++DFGL R P YT
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRG 209
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 210 GKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMS 245
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++L+ PP +
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR---PPGME 141
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
SY YQL + Y S++ IHRDL +N+L+ ++ +K+ADF
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 119 GLSRAFTI--PMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L +VY+ D+WS G + E+
Sbjct: 202 GLARDINNIDXXKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEI 252
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI--PMNRYTHE 225
+S YQL + Y S++ IHRDL +N+L+ ++ +K+ADFGL+R + T+
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L +VY+ D+WS G + E+ T +++LF++ +
Sbjct: 220 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 82/157 (52%), Gaps = 7/157 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
+ E V+ L H +++L+ V +F++ E++ L ++L+
Sbjct: 52 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 111
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+ EA+ Y S++ +HRDL +N L+N G +K++DFGLSR + + YT + +
Sbjct: 112 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR--YVLDDEYTSSRGSKFP 169
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQL 174
+ PPE+L+ +K +S+ DIW+ G + E+ L ++
Sbjct: 170 VRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLGKM 205
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 19/118 (16%)
Query: 160 SAGCIFS---EMSYLYQ----------LLEALRYCHSRRIIHRDLKPQNILINKSGALKL 206
+ GC+ + EM + +Q + EA+ Y S++ +HRDL +N L+N G +K+
Sbjct: 87 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 146
Query: 207 ADFGLSRAFTIPMNRYTHEVVTLW---YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+DFGLSR + + YT + + + PPE+L+ +K +S+ DIW+ G + E+ +
Sbjct: 147 SDFGLSR--YVLDDEYTSSRGSKFPVRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYS 201
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPN+IRL V+ + +V E + L FL+ L
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT---HEVV 136
+ ++Y +HRDL +NILIN + K++DFGLSR P YT ++
Sbjct: 154 RGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
W P I + +++ D+WS G + E MSY
Sbjct: 214 IRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSY 246
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT--- 223
+ L + ++Y +HRDL +NILIN + K++DFGLSR P YT
Sbjct: 150 VGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 210 GKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMS 245
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++LQ PP L
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARE---PPGLE 134
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
SY YQ+ + Y S++ IHRDL +N+L+ + +K+ADF
Sbjct: 135 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 194
Query: 119 GLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L ++Y+ D+WS G + E+
Sbjct: 195 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEI 245
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHE 225
+S YQ+ + Y S++ IHRDL +N+L+ + +K+ADFGL+R + T+
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L ++Y+ D+WS G + E+ T +++LF++ +
Sbjct: 213 RLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPN+IRL V+ + +V E + L FL+ L
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT---HEVV 136
+ ++Y +HRDL +NILIN + K++DFGLSR P YT ++
Sbjct: 125 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
W P I + +++ D+WS G + E MSY
Sbjct: 185 IRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSY 217
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT--- 223
+ L + ++Y +HRDL +NILIN + K++DFGLSR P YT
Sbjct: 121 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 181 GKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMS 216
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 23/165 (13%)
Query: 17 VPSTALREISVLKELK-HPNVIRLHDVIPVDFKLFLVFEFLR--------QDLKDFLQTT 67
+ + +EI+ LK + HPN+++LH+V FLV E L + K F +T
Sbjct: 48 MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETE 107
Query: 68 PVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAF 124
A + +L+ A+ + H ++HRDLKP+N+L N + +K+ DFG +R
Sbjct: 108 --------ASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR-L 158
Query: 125 TIPMNR-YTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
P N+ TL Y PE LL Y + D+WS G I M
Sbjct: 159 KPPDNQPLKTPCFTLHYAAPE-LLNQNGYDESCDLWSLGVILYTM 202
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 166 SEMSYLY-QLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNR 221
+E SY+ +L+ A+ + H ++HRDLKP+N+L N + +K+ DFG +R P N+
Sbjct: 106 TEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR-LKPPDNQ 164
Query: 222 -YTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLF 266
TL Y PE LL Y + D+WS G I M++ + F
Sbjct: 165 PLKTPCFTLHYAAPE-LLNQNGYDESCDLWSLGVILYTMLSGQVPF 209
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 9/156 (5%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALA 76
P L E +++K+L+H ++RL+ V+ + ++++ E++ L DFL+T P + +
Sbjct: 60 PDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKT-PSGIKLTIN 117
Query: 77 K--SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYT 132
K Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R R
Sbjct: 118 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 177
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ W P I G ++ D+WS G + +E+
Sbjct: 178 AKFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEI 211
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R R + W
Sbjct: 125 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 184
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
P I G ++ D+WS G + +E++T
Sbjct: 185 TAPEAINYG--TFTIKSDVWSFGILLTEIVT 213
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 17/178 (9%)
Query: 20 TALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKS 78
+E+ +++ L+HP ++ L + +F+V + L DL+ LQ V K
Sbjct: 61 NVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQN-VHFKEETVKL 119
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
++ +L+ AL Y ++RIIHRD+KP NIL+++ G + + DF ++ A + T T
Sbjct: 120 FICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIA-AMLPRETQITTMAGTK 178
Query: 139 WYRPPEILLGAK--VYSTTVDIWSAGCIFSEMSYLYQLLEALRYCH------SRRIIH 188
Y PE+ K YS VD WS G Y+LL R H S+ I+H
Sbjct: 179 PYMAPEMFSSRKGAGYSFAVDWWSLGVT------AYELLRGRRPYHIRSSTSSKEIVH 230
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 7/155 (4%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
++ +L+ AL Y ++RIIHRD+KP NIL+++ G + + DF ++ A + T T
Sbjct: 120 FICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIA-AMLPRETQITTMAGTK 178
Query: 230 WYRPPEILLGAK--VYSTTVDIWSAGCIFSEMITKKTLFA--GDSEIDQLFRIFRTLGTP 285
Y PE+ K YS VD WS G E++ + + + ++ F T
Sbjct: 179 PYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVT 238
Query: 286 HEDVWPG--VSKLPIYKTDFPEWRPKKFSEILNLP 318
+ W VS L P+ R + S++ N P
Sbjct: 239 YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFP 273
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 9/156 (5%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALA 76
P L E +++K+L+H ++RL+ V+ + ++++ E++ L DFL+T P + +
Sbjct: 53 PDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKT-PSGIKLTIN 110
Query: 77 K--SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYT 132
K Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R R
Sbjct: 111 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 170
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ W P I G ++ D+WS G + +E+
Sbjct: 171 AKFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEI 204
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R R + W
Sbjct: 118 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 177
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
P I G ++ D+WS G + +E++T
Sbjct: 178 TAPEAINYG--TFTIKSDVWSFGILLTEIVT 206
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPN+IRL V+ + +V E + L FL+ L
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT---HEVV 136
+ ++Y +HRDL +NILIN + K++DFGLSR P YT ++
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
W P I + +++ D+WS G + E MSY
Sbjct: 214 IRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSY 246
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT--- 223
+ L + ++Y +HRDL +NILIN + K++DFGLSR P YT
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 210 GKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMS 245
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 4/148 (2%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLK-DFLQTTPVPVPPALAKSYLY 81
+EI+VL + V + + KL+++ E+L D L+ P + L
Sbjct: 70 QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFD--EFQIATMLK 127
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 141
++L+ L Y HS + IHRD+K N+L+++ G +KLADFG++ T + V T ++
Sbjct: 128 EILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 187
Query: 142 PPEILLGAKVYSTTVDIWSAGCIFSEMS 169
PE++ + Y + DIWS G E++
Sbjct: 188 APEVIQQS-AYDSKADIWSLGITAIELA 214
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 153 STTVDIWSAGCI--FSEMSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFG 210
+ +D+ AG F + L ++L+ L Y HS + IHRD+K N+L+++ G +KLADFG
Sbjct: 106 GSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFG 165
Query: 211 LSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 259
++ T + V T ++ PE++ + Y + DIWS G E+
Sbjct: 166 VAGQLTDTQIKRNTFVGTPFWMAPEVIQQS-AYDSKADIWSLGITAIEL 213
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 9/156 (5%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALA 76
P L E +++K+L+H ++RL+ V+ + ++++ E++ L DFL+T P + +
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKT-PSGIKLTIN 109
Query: 77 K--SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYT 132
K Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R R
Sbjct: 110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 169
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ W P I G ++ D+WS G + +E+
Sbjct: 170 AKFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEI 203
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R R + W
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 176
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
P I G ++ D+WS G + +E++T
Sbjct: 177 TAPEAINYG--TFTIKSDVWSFGILLTEIVT 205
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++LQ PP L
Sbjct: 70 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR---PPGLE 126
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
SY YQ+ + Y S++ IHRDL +N+L+ + +K+ADF
Sbjct: 127 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 186
Query: 119 GLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L ++Y+ D+WS G + E+
Sbjct: 187 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEI 237
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHE 225
+S YQ+ + Y S++ IHRDL +N+L+ + +K+ADFGL+R + T+
Sbjct: 145 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L ++Y+ D+WS G + E+ T +++LF++ +
Sbjct: 205 RLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 258
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 9/165 (5%)
Query: 9 RSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTT 67
+S Q P L E +++K+L+H ++RL+ V+ + ++++ E++ L DFL+T
Sbjct: 45 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKT- 102
Query: 68 PVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF- 124
P + + K Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R
Sbjct: 103 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 162
Query: 125 -TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
R + W P I G ++ D+WS G + +E+
Sbjct: 163 DNEXTAREGAKFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEI 205
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R R + W
Sbjct: 119 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 178
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
P I G ++ D+WS G + +E++T
Sbjct: 179 TAPEAINYG--TFTIKSDVWSFGILLTEIVT 207
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 9/156 (5%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALA 76
P L E +++K+L+H ++RL+ V+ + ++++ E++ L DFL+T P + +
Sbjct: 58 PDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKT-PSGIKLTIN 115
Query: 77 K--SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYT 132
K Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R R
Sbjct: 116 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 175
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ W P I G ++ D+WS G + +E+
Sbjct: 176 AKFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEI 209
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R R + W
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 182
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
P I G ++ D+WS G + +E++T
Sbjct: 183 TAPEAINYG--TFTIKSDVWSFGILLTEIVT 211
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 9/156 (5%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALA 76
P L E +++K+L+H ++RL+ V+ + ++++ E++ L DFL+T P + +
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKT-PSGIKLTIN 109
Query: 77 K--SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYT 132
K Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R R
Sbjct: 110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 169
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ W P I G ++ D+WS G + +E+
Sbjct: 170 AKFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEI 203
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R R + W
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 176
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
P I G ++ D+WS G + +E++T
Sbjct: 177 TAPEAINYG--TFTIKSDVWSFGILLTEIVT 205
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 9/156 (5%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALA 76
P L E +++K+L+H ++RL+ V+ + ++++ E++ L DFL+T P + +
Sbjct: 61 PDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKT-PSGIKLTIN 118
Query: 77 K--SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYT 132
K Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R R
Sbjct: 119 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 178
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ W P I G ++ D+WS G + +E+
Sbjct: 179 AKFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEI 212
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R R + W
Sbjct: 126 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 185
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
P I G ++ D+WS G + +E++T
Sbjct: 186 TAPEAINYG--TFTIKSDVWSFGILLTEIVT 214
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 23 REISVLKELKHPN--VIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYL 80
EI+ L +L+ + +IRL+D D +++V E DL +L+ + P KSY
Sbjct: 103 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYW 161
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT--HEVVTL 138
+LEA+ H I+H DLKP N LI G LKL DFG++ +V +
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAV 220
Query: 139 WYRPPEIL----------LGAKVYSTTVDIWSAGCIFSEMSY 170
Y PPE + S D+WS GCI M+Y
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 262
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 77/192 (40%), Gaps = 39/192 (20%)
Query: 169 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT--HEV 226
SY +LEA+ H I+H DLKP N LI G LKL DFG++ +V
Sbjct: 159 SYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQV 217
Query: 227 VTLWYRPPEIL----------LGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLF 276
+ Y PPE + S D+WS GCI M KT F I+Q+
Sbjct: 218 GAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQIS 275
Query: 277 RIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQ 336
++ + HE +FP+ +P+ DV + DPKQ
Sbjct: 276 KLHAIIDPNHE-------------IEFPD-----------IPEKDLQDVLKCCLKRDPKQ 311
Query: 337 RVSAKTILQHEY 348
R+S +L H Y
Sbjct: 312 RISIPELLAHPY 323
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 9/156 (5%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALA 76
P L E +++K+L+H ++RL+ V+ + ++++ E++ L DFL+T P + +
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKT-PSGIKLTIN 109
Query: 77 K--SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYT 132
K Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R R
Sbjct: 110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREG 169
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ W P I G ++ D+WS G + +E+
Sbjct: 170 AKFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEI 203
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
Q+ E + + R IHRDL+ NIL++ + + K+ADFGL+R R + W
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKW 176
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
P I G ++ D+WS G + +E++T
Sbjct: 177 TAPEAINYG--TFTIKSDVWSFGILLTEIVT 205
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYLY 81
E ++ P V++L D L++V E++ DL + + VP AK Y
Sbjct: 124 EERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN--YDVPEKWAKFYTA 181
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNRYTHEVVTLWY 140
+++ AL HS +IHRD+KP N+L++K G LKLADFG M V T Y
Sbjct: 182 EVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDY 241
Query: 141 RPPEILL---GAKVYSTTVDIWSAGCIFSEM 168
PE+L G Y D WS G EM
Sbjct: 242 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEM 272
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNRYTHEVVT 228
Y +++ AL HS +IHRD+KP N+L++K G LKLADFG M V T
Sbjct: 179 YTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGT 238
Query: 229 LWYRPPEILL---GAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
Y PE+L G Y D WS G EM+ T F DS + +I
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKI 291
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++LQ PP L
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR---PPGLE 134
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
SY YQ+ + Y S++ IHRDL +N+L+ + +K+ADF
Sbjct: 135 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 194
Query: 119 GLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L ++Y+ D+WS G + E+
Sbjct: 195 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEI 245
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHE 225
+S YQ+ + Y S++ IHRDL +N+L+ + +K+ADFGL+R + T+
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L ++Y+ D+WS G + E+ T +++LF++ +
Sbjct: 213 RLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPV--PVPPALAKS 78
LRE++++K L+HPN++ + L +V E+L R L L + + S
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 79 YLYQLLEALRYCHSRR--IIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
Y + + + Y H+R I+HRDLK N+L++K +K+ DFGLSR
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAG 201
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY---------QLLEALRYCHSRRII 187
T + PE+L + D++S G I E++ L Q++ A+ + R I
Sbjct: 202 TPEWMAPEVLRDEPSNEKS-DVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEI 260
Query: 188 HRDLKPQ 194
R+L PQ
Sbjct: 261 PRNLNPQ 267
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 168 MSYLYQLLEALRYCHSRR--IIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 225
+S Y + + + Y H+R I+HRDLK N+L++K +K+ DFGLSR
Sbjct: 140 LSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXA 199
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
T + PE+L + D++S G I E+ T
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKS-DVYSFGVILWELAT 234
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++L+ PP +
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR---PPGME 141
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
SY YQL + Y S++ IHRDL +N+L+ ++ +K+ADF
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 119 GLSRAFTIP--MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L +VY+ D+WS G + E+
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEI 252
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP--MNRYTHE 225
+S YQL + Y S++ IHRDL +N+L+ ++ +K+ADFGL+R + T+
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L +VY+ D+WS G + E+ T +++LF++ +
Sbjct: 220 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++LQ PP L
Sbjct: 67 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR---RPPGLE 123
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
SY YQ+ + Y S++ IHRDL +N+L+ + +K+ADF
Sbjct: 124 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 183
Query: 119 GLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L ++Y+ D+WS G + E+
Sbjct: 184 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEI 234
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHE 225
+S YQ+ + Y S++ IHRDL +N+L+ + +K+ADFGL+R + T+
Sbjct: 142 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L ++Y+ D+WS G + E+ T +++LF++ +
Sbjct: 202 RLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 255
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++L+ PP +
Sbjct: 74 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR---PPGME 130
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
SY YQL + Y S++ IHRDL +N+L+ ++ +K+ADF
Sbjct: 131 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADF 190
Query: 119 GLSRAFTIP--MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L +VY+ D+WS G + E+
Sbjct: 191 GLARDINNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEI 241
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP--MNRYTHE 225
+S YQL + Y S++ IHRDL +N+L+ ++ +K+ADFGL+R + T+
Sbjct: 149 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L +VY+ D+WS G + E+ T +++LF++ +
Sbjct: 209 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 262
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++LQ PP L
Sbjct: 71 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR---PPGLE 127
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
SY YQ+ + Y S++ IHRDL +N+L+ + +K+ADF
Sbjct: 128 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 187
Query: 119 GLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L ++Y+ D+WS G + E+
Sbjct: 188 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEI 238
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHE 225
+S YQ+ + Y S++ IHRDL +N+L+ + +K+ADFGL+R + T+
Sbjct: 146 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L ++Y+ D+WS G + E+ T +++LF++ +
Sbjct: 206 RLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 259
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++L+ PP +
Sbjct: 77 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR---PPGME 133
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
SY YQL + Y S++ IHRDL +N+L+ ++ +K+ADF
Sbjct: 134 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADF 193
Query: 119 GLSRAFTIP--MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L +VY+ D+WS G + E+
Sbjct: 194 GLARDINNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEI 244
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP--MNRYTHE 225
+S YQL + Y S++ IHRDL +N+L+ ++ +K+ADFGL+R + T+
Sbjct: 152 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L +VY+ D+WS G + E+ T +++LF++ +
Sbjct: 212 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 265
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 82/157 (52%), Gaps = 7/157 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
+ E V+ L H +++L+ V +F++ E++ L ++L+
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 126
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+ EA+ Y S++ +HRDL +N L+N G +K++DFGLSR + + T V + +
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR--YVLDDEETSSVGSKFP 184
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQL 174
+ PPE+L+ +K +S+ DIW+ G + E+ L ++
Sbjct: 185 VRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLGKM 220
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 19/118 (16%)
Query: 160 SAGCIFS---EMSYLYQ----------LLEALRYCHSRRIIHRDLKPQNILINKSGALKL 206
+ GC+ + EM + +Q + EA+ Y S++ +HRDL +N L+N G +K+
Sbjct: 102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 161
Query: 207 ADFGLSRAFTIPMNRYTHEVVTLW---YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+DFGLSR + + T V + + + PPE+L+ +K +S+ DIW+ G + E+ +
Sbjct: 162 SDFGLSR--YVLDDEETSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYS 216
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++LQ PP L
Sbjct: 119 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR---RPPGLE 175
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
SY YQ+ + Y S++ IHRDL +N+L+ + +K+ADF
Sbjct: 176 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 235
Query: 119 GLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L ++Y+ D+WS G + E+
Sbjct: 236 GLARDIHHIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEI 286
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHE 225
+S YQ+ + Y S++ IHRDL +N+L+ + +K+ADFGL+R + T+
Sbjct: 194 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L ++Y+ D+WS G + E+ T +++LF++ +
Sbjct: 254 RLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 307
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 87/173 (50%), Gaps = 28/173 (16%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++L+ PP +
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR---PPGME 141
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
SY YQL + Y S++ IHRDL +N+L+ ++ +K+ADF
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 119 GLSRAFTIPMNRY---THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R ++ Y T+ + + + PE L +VY+ D+WS G + E+
Sbjct: 202 GLARDIN-NIDYYKNTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEI 252
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRY---TH 224
+S YQL + Y S++ IHRDL +N+L+ ++ +K+ADFGL+R ++ Y T+
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYYKNTTN 218
Query: 225 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L +VY+ D+WS G + E+ T +++LF++ +
Sbjct: 219 GRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +++ HP++++L VI + ++++ E +L+ FLQ + A Y
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 117
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTL 138
YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + ++
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK 177
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W P I + +++ D+W G E+
Sbjct: 178 WMAPESI--NFRRFTSASDVWMFGVCMWEI 205
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVV 227
Y YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + ++
Sbjct: 116 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLP 175
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAG-CIFSEMITKKTLFAGDSEIDQLFRI 278
W P I + +++ D+W G C++ ++ F G D + RI
Sbjct: 176 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++L+ PP +
Sbjct: 72 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR---PPGME 128
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
SY YQL + Y S++ IHRDL +N+L+ ++ +K+ADF
Sbjct: 129 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADF 188
Query: 119 GLSRAFTIP--MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L +VY+ D+WS G + E+
Sbjct: 189 GLARDINNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEI 239
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP--MNRYTHE 225
+S YQL + Y S++ IHRDL +N+L+ ++ +K+ADFGL+R + T+
Sbjct: 147 VSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L +VY+ D+WS G + E+ T +++LF++ +
Sbjct: 207 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 260
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++L+ PP +
Sbjct: 131 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR---RPPGME 187
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
SY YQL + Y S++ IHRDL +N+L+ ++ +K+ADF
Sbjct: 188 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADF 247
Query: 119 GLSRAFTIP--MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L +VY+ D+WS G + E+
Sbjct: 248 GLARDINNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEI 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP--MNRYTHE 225
+S YQL + Y S++ IHRDL +N+L+ ++ +K+ADFGL+R + T+
Sbjct: 206 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L +VY+ D+WS G + E+ T +++LF++ +
Sbjct: 266 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 319
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 36/192 (18%)
Query: 165 FSE---MSYLYQLLEALRYCHSRRIIHRDLKPQNIL-INKSG---ALKLADFGLSRAFTI 217
FSE + L+ + + + Y H++ ++HRDLKP NIL +++SG ++++ DFG ++
Sbjct: 113 FSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172
Query: 218 PMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAG---DSEIDQ 274
T + PE+ L + Y DIWS G + M+T T FA D+ +
Sbjct: 173 ENGLLMTPCYTANFVAPEV-LERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEI 231
Query: 275 LFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDP 334
L RI + W VS A D+ SK++ +DP
Sbjct: 232 LARIGSGKFSLSGGYWNSVSD-------------------------TAKDLVSKMLHVDP 266
Query: 335 KQRVSAKTILQH 346
QR++A +L+H
Sbjct: 267 HQRLTAALVLRH 278
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 27 VLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLE 85
+L+ +HPN+I L DV +++V E ++ +L D + A + L+ + +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF-FSEREASAVLFTITK 127
Query: 86 ALRYCHSRRIIHRDLKPQNIL-INKSG---ALKLADFGLSRAFTIPMNRYTHEVVTLWYR 141
+ Y H++ ++HRDLKP NIL +++SG ++++ DFG ++ T +
Sbjct: 128 TVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFV 187
Query: 142 PPEILLGAKVYSTTVDIWSAGCIFSEM 168
PE+ L + Y DIWS G + M
Sbjct: 188 APEV-LERQGYDAACDIWSLGVLLYTM 213
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++L+ PP +
Sbjct: 85 SDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARR---PPGME 141
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
SY YQL + Y S++ IHRDL +N+L+ ++ +K+ADF
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 119 GLSRAFTIP--MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L +VY+ D+WS G + E+
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEI 252
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP--MNRYTHE 225
+S YQL + Y S++ IHRDL +N+L+ ++ +K+ADFGL+R + T+
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L +VY+ D+WS G + E+ T +++LF++ +
Sbjct: 220 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++L+ PP +
Sbjct: 85 SDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARR---PPGME 141
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
SY YQL + Y S++ IHRDL +N+L+ ++ +K+ADF
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 119 GLSRAFTIP--MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L +VY+ D+WS G + E+
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEI 252
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP--MNRYTHE 225
+S YQL + Y S++ IHRDL +N+L+ ++ +K+ADFGL+R + T+
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L +VY+ D+WS G + E+ T +++LF++ +
Sbjct: 220 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVP-------VPP 73
L+EI + + HPN++ + V +L+LV + L + D ++ +
Sbjct: 61 LKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE 120
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTH 133
+ + L ++LE L Y H IHRD+K NIL+ + G++++ADFG+S AF T
Sbjct: 121 STIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS-AFLATGGDITR 179
Query: 134 E------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
V T + PE++ + Y DIWS G E++
Sbjct: 180 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELA 221
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 26/189 (13%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE----- 225
L ++LE L Y H IHRD+K NIL+ + G++++ADFG+S AF T
Sbjct: 127 LREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS-AFLATGGDITRNKVRKT 185
Query: 226 -VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGT 284
V T + PE++ + Y DIWS G E+ T + + + + TL
Sbjct: 186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY---HKYPPMKVLMLTLQN 242
Query: 285 PHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
+ GV + K K F ++++L + DP++R +A +L
Sbjct: 243 DPPSLETGVQDKEMLKK-----YGKSFRKMISL-----------CLQKDPEKRPTAAELL 286
Query: 345 QHEYFNQVE 353
+H++F + +
Sbjct: 287 RHKFFQKAK 295
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +++ HP++++L VI + ++++ E +L+ FLQ + A Y
Sbjct: 62 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 120
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL-- 138
YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + Y L
Sbjct: 121 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPI 179
Query: 139 -WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W P I + +++ D+W G E+
Sbjct: 180 KWMAPESI--NFRRFTSASDVWMFGVCMWEI 208
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + Y L
Sbjct: 119 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL 177
Query: 230 ---WYRPPEILLGAKVYSTTVDIWSAG-CIFSEMITKKTLFAGDSEIDQLFRI 278
W P I + +++ D+W G C++ ++ F G D + RI
Sbjct: 178 PIKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 228
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +++ HP++++L VI + ++++ E +L+ FLQ + A Y
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 117
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTL 138
YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + ++
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W P I + +++ D+W G E+
Sbjct: 178 WMAPESI--NFRRFTSASDVWMFGVCMWEI 205
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVV 227
Y YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + ++
Sbjct: 116 YAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAG-CIFSEMITKKTLFAGDSEIDQLFRI 278
W P I + +++ D+W G C++ ++ F G D + RI
Sbjct: 176 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPN+IRL V+ +V E++ L FL+T L
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNRYT---HEVV 136
+ +RY +HRDL +N+L++ + K++DFGLSR P YT ++
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIP 217
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W P I + +S+ D+WS G + E+
Sbjct: 218 IRWTAPEAIAF--RTFSSASDVWSFGVVMWEV 247
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 19/137 (13%)
Query: 164 IFSEMSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNRY 222
I + L + +RY +HRDL +N+L++ + K++DFGLSR P Y
Sbjct: 150 IMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209
Query: 223 T---HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMI----------TKKTLFAGD 269
T ++ W P I + +S+ D+WS G + E++ T + +
Sbjct: 210 TTTGGKIPIRWTAPEAIAF--RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI--- 264
Query: 270 SEIDQLFRIFRTLGTPH 286
S +++ +R+ +G PH
Sbjct: 265 SSVEEGYRLPAPMGCPH 281
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +++ HP++++L VI + ++++ E +L+ FLQ + A Y
Sbjct: 87 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 145
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTL 138
YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + ++
Sbjct: 146 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 205
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W P I + +++ D+W G E+
Sbjct: 206 WMAPESI--NFRRFTSASDVWMFGVCMWEI 233
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVV 227
Y YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + ++
Sbjct: 144 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 203
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAG-CIFSEMITKKTLFAGDSEIDQLFRI 278
W P I + +++ D+W G C++ ++ F G D + RI
Sbjct: 204 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 253
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVP-------VPP 73
L+EI + + HPN++ + V +L+LV + L + D ++ +
Sbjct: 56 LKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE 115
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTH 133
+ + L ++LE L Y H IHRD+K NIL+ + G++++ADFG+S AF T
Sbjct: 116 STIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS-AFLATGGDITR 174
Query: 134 E------VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
V T + PE++ + Y DIWS G E++
Sbjct: 175 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELA 216
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 26/189 (13%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE----- 225
L ++LE L Y H IHRD+K NIL+ + G++++ADFG+S AF T
Sbjct: 122 LREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS-AFLATGGDITRNKVRKT 180
Query: 226 -VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGT 284
V T + PE++ + Y DIWS G E+ T + + + + TL
Sbjct: 181 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY---HKYPPMKVLMLTLQN 237
Query: 285 PHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
+ GV + K K F ++++L + DP++R +A +L
Sbjct: 238 DPPSLETGVQDKEMLKK-----YGKSFRKMISL-----------CLQKDPEKRPTAAELL 281
Query: 345 QHEYFNQVE 353
+H++F + +
Sbjct: 282 RHKFFQKAK 290
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +++ HP++++L VI + ++++ E +L+ FLQ + A Y
Sbjct: 64 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 122
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL-- 138
YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + Y L
Sbjct: 123 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPI 181
Query: 139 -WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W P I + +++ D+W G E+
Sbjct: 182 KWMAPESI--NFRRFTSASDVWMFGVCMWEI 210
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + Y L
Sbjct: 121 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL 179
Query: 230 ---WYRPPEILLGAKVYSTTVDIWSAG-CIFSEMITKKTLFAGDSEIDQLFRI 278
W P I + +++ D+W G C++ ++ F G D + RI
Sbjct: 180 PIKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 230
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 33/205 (16%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAK--- 77
L E +VLK++ HP+VI+L+ D L L+ E+ + L+ FL+ + P L
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 78 --------------------SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
S+ +Q+ + ++Y +++HRDL +NIL+ + +K++D
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISD 193
Query: 118 FGLSRAF---TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYL--- 171
FGLSR + R + W + +Y+T D+WS G + E+ L
Sbjct: 194 FGLSRDVYEEDSXVKRSQGRIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 172 -YQLLEALRYCHSRRIIHRDLKPQN 195
Y + R + + HR +P N
Sbjct: 252 PYPGIPPERLFNLLKTGHRMERPDN 276
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF---TIPMNRYTH 224
+S+ +Q+ + ++Y +++HRDL +NIL+ + +K++DFGLSR + R
Sbjct: 153 ISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQG 212
Query: 225 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ W + +Y+T D+WS G + E++T
Sbjct: 213 RIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +++ HP++++L VI + ++++ E +L+ FLQ + A Y
Sbjct: 61 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 119
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL-- 138
YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + Y L
Sbjct: 120 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPI 178
Query: 139 -WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W P I + +++ D+W G E+
Sbjct: 179 KWMAPESI--NFRRFTSASDVWMFGVCMWEI 207
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + Y L
Sbjct: 118 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL 176
Query: 230 ---WYRPPEILLGAKVYSTTVDIWSAG-CIFSEMITKKTLFAGDSEIDQLFRI 278
W P I + +++ D+W G C++ ++ F G D + RI
Sbjct: 177 PIKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 227
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++L+ PP +
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR---PPGME 141
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
SY YQL + Y S++ IHRDL +N+L+ ++ +++ADF
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADF 201
Query: 119 GLSRAFTIP--MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L +VY+ D+WS G + E+
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEI 252
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP--MNRYTHE 225
+S YQL + Y S++ IHRDL +N+L+ ++ +++ADFGL+R + T+
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L +VY+ D+WS G + E+ T +++LF++ +
Sbjct: 220 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 10/157 (6%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
L E S++ + +HPN+IRL V+ + ++ EF+ L FL+ L
Sbjct: 63 LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML 122
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTH------E 134
+ +RY +HRDL +NIL+N + K++DFGLSR + T+ +
Sbjct: 123 RGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGK 182
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
+ W P I + +++ D WS G + E MS+
Sbjct: 183 IPIRWTAPEAIAF--RKFTSASDAWSYGIVMWEVMSF 217
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTH--- 224
+ L + +RY +HRDL +NIL+N + K++DFGLSR + T+
Sbjct: 119 VGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSS 178
Query: 225 ---EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D WS G + E+++
Sbjct: 179 LGGKIPIRWTAPEAIAF--RKFTSASDAWSYGIVMWEVMS 216
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +++ HP++++L VI + ++++ E +L+ FLQ + A Y
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 117
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTL 138
YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + ++
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W P I + +++ D+W G E+
Sbjct: 178 WMAPESI--NFRRFTSASDVWMFGVCMWEI 205
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVV 227
Y YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + ++
Sbjct: 116 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAG-CIFSEMITKKTLFAGDSEIDQLFRI 278
W P I + +++ D+W G C++ ++ F G D + RI
Sbjct: 176 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +++ HP++++L VI + ++++ E +L+ FLQ + A Y
Sbjct: 56 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 114
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL-- 138
YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + Y L
Sbjct: 115 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPI 173
Query: 139 -WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W P I + +++ D+W G E+
Sbjct: 174 KWMAPESI--NFRRFTSASDVWMFGVCMWEI 202
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + Y L
Sbjct: 113 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL 171
Query: 230 ---WYRPPEILLGAKVYSTTVDIWSAG-CIFSEMITKKTLFAGDSEIDQLFRI 278
W P I + +++ D+W G C++ ++ F G D + RI
Sbjct: 172 PIKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 222
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E+ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N++I++ G +K+ DFGL++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N++I++ G +K+ DFGL++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +++ HP++++L VI + ++++ E +L+ FLQ + A Y
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 117
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTL 138
YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + ++
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W P I + +++ D+W G E+
Sbjct: 178 WMAPESI--NFRRFTSASDVWMFGVCMWEI 205
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVV 227
Y YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + ++
Sbjct: 116 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAG-CIFSEMITKKTLFAGDSEIDQLFRI 278
W P I + +++ D+W G C++ ++ F G D + RI
Sbjct: 176 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +++ HP++++L VI + ++++ E +L+ FLQ + A Y
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL-- 138
YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + Y L
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPI 556
Query: 139 -WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W P I + +++ D+W G E+
Sbjct: 557 KWMAPESI--NFRRFTSASDVWMFGVCMWEI 585
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + Y L
Sbjct: 496 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL 554
Query: 230 ---WYRPPEILLGAKVYSTTVDIWSAG-CIFSEMITKKTLFAGDSEIDQLFRI 278
W P I + +++ D+W G C++ ++ F G D + RI
Sbjct: 555 PIKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++LQ PP L
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR---PPGLE 134
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
S+ YQ+ + Y S++ IHRDL +N+L+ + +K+ADF
Sbjct: 135 FSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 194
Query: 119 GLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L ++Y+ D+WS G + E+
Sbjct: 195 GLARDIHHIDXXKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEI 245
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHE 225
+S YQ+ + Y S++ IHRDL +N+L+ + +K+ADFGL+R + T+
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L ++Y+ D+WS G + E+ T +++LF++ +
Sbjct: 213 RLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYL 80
L+E +++ HP++++L VI + ++++ E +L+ FLQ + A Y
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL-- 138
YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + Y L
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPI 556
Query: 139 -WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W P I + +++ D+W G E+
Sbjct: 557 KWMAPESI--NFRRFTSASDVWMFGVCMWEI 585
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y YQL AL Y S+R +HRD+ +N+L++ + +KL DFGLSR + Y L
Sbjct: 496 YAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKL 554
Query: 230 ---WYRPPEILLGAKVYSTTVDIWSAG-CIFSEMITKKTLFAGDSEIDQLFRI 278
W P I + +++ D+W G C++ ++ F G D + RI
Sbjct: 555 PIKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 81/151 (53%), Gaps = 7/151 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
+E + +L HP +++ + V ++ +++V E++ L ++L++ + P+
Sbjct: 51 FQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMC 110
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
Y + E + + S + IHRDL +N L+++ +K++DFG++R + ++Y V T +
Sbjct: 111 YDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTR--YVLDDQYVSSVGTKFP 168
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ PE+ K YS+ D+W+ G + E+
Sbjct: 169 VKWSAPEVFHYFK-YSSKSDVWAFGILMWEV 198
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 81/166 (48%), Gaps = 30/166 (18%)
Query: 172 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 230
Y + E + + S + IHRDL +N L+++ +K++DFG++R + ++Y V T +
Sbjct: 111 YDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTR--YVLDDQYVSSVGTKFP 168
Query: 231 --YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL---FAGDSE----IDQLFRIFRT 281
+ PE+ K YS+ D+W+ G + E+ + + +SE + Q R++R
Sbjct: 169 VKWSAPEVFHYFK-YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYR- 226
Query: 282 LGTPHEDVWPGVSKLPIYKT------DFPEWRPKKFSEILNLPDPL 321
P ++ IY+ + PE RP F ++L+ +PL
Sbjct: 227 ---------PHLASDTIYQIMYSCWHELPEKRP-TFQQLLSSIEPL 262
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKD-FLQTTPVPVPPALAKSYL 80
L E S++ + HPNV+ L V+ + +V EF+ D FL+ L
Sbjct: 92 LCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGML 151
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNRYT---HEVV 136
+ +RY +HRDL +NIL+N + K++DFGLSR P YT ++
Sbjct: 152 RGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIP 211
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
W P I + +++ D+WS G + E MSY
Sbjct: 212 VRWTAPEAIQY--RKFTSASDVWSYGIVMWEVMSY 244
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNRYT--- 223
+ L + +RY +HRDL +NIL+N + K++DFGLSR P YT
Sbjct: 148 VGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTG 207
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 208 GKIPVRWTAPEAIQY--RKFTSASDVWSYGIVMWEVMS 243
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 16/161 (9%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQT-TPVPV-------PP 73
RE +L L+H ++++ + V L +VFE+++ DL FL+ P V P
Sbjct: 64 REAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPT 123
Query: 74 ALAKSYLY----QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-AFTIPM 128
L +S + Q+ + Y S+ +HRDL +N L+ ++ +K+ DFG+SR ++
Sbjct: 124 ELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY 183
Query: 129 NRY-THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
R H ++ + + PPE ++ K ++T D+WS G + E+
Sbjct: 184 YRVGGHTMLPIRWMPPESIMYRK-FTTESDVWSLGVVLWEI 223
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 166 SEMSYLYQLLEA-LRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-AFTIPMNRY- 222
S+M ++ Q + A + Y S+ +HRDL +N L+ ++ +K+ DFG+SR ++ R
Sbjct: 128 SQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVG 187
Query: 223 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
H ++ + + PPE ++ K ++T D+WS G + E+ T
Sbjct: 188 GHTMLPIRWMPPESIMYRK-FTTESDVWSLGVVLWEIFT 225
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPV--PVPPALAKS 78
LRE++++K L+HPN++ + L +V E+L R L L + + S
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 79 YLYQLLEALRYCHSRR--IIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 136
Y + + + Y H+R I+HR+LK N+L++K +K+ DFGLSR
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAG 201
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY---------QLLEALRYCHSRRII 187
T + PE+L + D++S G I E++ L Q++ A+ + R I
Sbjct: 202 TPEWMAPEVLRDEPSNEKS-DVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEI 260
Query: 188 HRDLKPQ 194
R+L PQ
Sbjct: 261 PRNLNPQ 267
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 168 MSYLYQLLEALRYCHSRR--IIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 225
+S Y + + + Y H+R I+HR+LK N+L++K +K+ DFGLSR
Sbjct: 140 LSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA 199
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
T + PE+L + D++S G I E+ T
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKS-DVYSFGVILWELAT 234
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L+E +LK+ HPN++RL V +++V E ++ D FL+T + +
Sbjct: 160 LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMV 219
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRA---FTIPMNRYTHEVVT 137
+ Y S+ IHRDL +N L+ + LK++DFG+SR + +V
Sbjct: 220 GDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPV 279
Query: 138 LWYRPPEILLGAKVYSTTVDIWSAGCIFSE 167
W P + G YS+ D+WS G + E
Sbjct: 280 KWTAPEALNYGR--YSSESDVWSFGILLWE 307
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 177 ALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRA---FTIPMNRYTHEVVTLWYRP 233
+ Y S+ IHRDL +N L+ + LK++DFG+SR + +V W P
Sbjct: 225 GMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAP 284
Query: 234 PEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ G YS+ D+WS G + E +
Sbjct: 285 EALNYGR--YSSESDVWSFGILLWETFS 310
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 12/158 (7%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
L E S++ + +HPN+IRL V+ + ++ EF+ L FL+ L
Sbjct: 65 LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML 124
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL-- 138
+ +RY +HRDL +NIL+N + K++DFGLSR F + E +L
Sbjct: 125 RGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSR-FLEENSSDPTETSSLGG 183
Query: 139 -----WYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
W P I + +++ D WS G + E MS+
Sbjct: 184 KIPIRWTAPEAIAF--RKFTSASDAWSYGIVMWEVMSF 219
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ L + +RY +HRDL +NIL+N + K++DFGLSR F + E
Sbjct: 121 VGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSR-FLEENSSDPTETS 179
Query: 228 TL-------WYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+L W P I + +++ D WS G + E+++
Sbjct: 180 SLGGKIPIRWTAPEAIAF--RKFTSASDAWSYGIVMWEVMS 218
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L+E +LK+ HPN++RL V +++V E ++ D FL+T + +
Sbjct: 160 LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMV 219
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRA---FTIPMNRYTHEVVT 137
+ Y S+ IHRDL +N L+ + LK++DFG+SR + +V
Sbjct: 220 GDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPV 279
Query: 138 LWYRPPEILLGAKVYSTTVDIWSAGCIFSE 167
W P + G YS+ D+WS G + E
Sbjct: 280 KWTAPEALNYGR--YSSESDVWSFGILLWE 307
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 177 ALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRA---FTIPMNRYTHEVVTLWYRP 233
+ Y S+ IHRDL +N L+ + LK++DFG+SR + +V W P
Sbjct: 225 GMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAP 284
Query: 234 PEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ G YS+ D+WS G + E +
Sbjct: 285 EALNYGR--YSSESDVWSFGILLWETFS 310
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 33/205 (16%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAK--- 77
L E +VLK++ HP+VI+L+ D L L+ E+ + L+ FL+ + P L
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 78 --------------------SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
S+ +Q+ + ++Y +++HRDL +NIL+ + +K++D
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISD 193
Query: 118 FGLSRAFTIP---MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYL--- 171
FGLSR + R + W + +Y+T D+WS G + E+ L
Sbjct: 194 FGLSRDVYEEDSYVKRSQGRIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 172 -YQLLEALRYCHSRRIIHRDLKPQN 195
Y + R + + HR +P N
Sbjct: 252 PYPGIPPERLFNLLKTGHRMERPDN 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP---MNRYTH 224
+S+ +Q+ + ++Y +++HRDL +NIL+ + +K++DFGLSR + R
Sbjct: 153 ISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQG 212
Query: 225 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ W + +Y+T D+WS G + E++T
Sbjct: 213 RIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 38/213 (17%)
Query: 172 YQLLEALRYCHSRRIIHRDLKPQNILINKSG-------------------ALKLADFGLS 212
YQ+ +++ + HS ++ H DLKP+NIL +S +K+ DFG
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG-- 182
Query: 213 RAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
+ T ++ V T YR PE++L A +S D+WS GCI E T+F
Sbjct: 183 -SATYDDEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240
Query: 273 DQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEW--------------RP-KKFSEILNL 317
+ L + R LG + + K + D +W +P K+F ++
Sbjct: 241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDV 300
Query: 318 PDPLAVDVFSKIMALDPKQRVSAKTILQHEYFN 350
D+ K++ DP +R++ + L+H +F+
Sbjct: 301 EHERLFDLIQKMLEYDPAKRITLREALKHPFFD 333
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 41/184 (22%)
Query: 9 RSRVQV-----EGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDF 63
RS +QV P++ R + +L+ +H I +VFE L DF
Sbjct: 59 RSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI------------CIVFELLGLSTYDF 106
Query: 64 LQTTP-VPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSG----------- 111
++ +P + YQ+ +++ + HS ++ H DLKP+NIL +S
Sbjct: 107 IKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKR 166
Query: 112 --------ALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGC 163
+K+ DFG + T ++ V T YR PE++L A +S D+WS GC
Sbjct: 167 DERTLINPDIKVVDFG---SATYDDEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGC 222
Query: 164 IFSE 167
I E
Sbjct: 223 ILIE 226
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++LQ PP L
Sbjct: 63 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR---PPGLE 119
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
Y YQ+ + Y S++ IHRDL +N+L+ + +K+ADF
Sbjct: 120 YCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 179
Query: 119 GLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L ++Y+ D+WS G + E+
Sbjct: 180 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEI 230
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHE 225
+S YQ+ + Y S++ IHRDL +N+L+ + +K+ADFGL+R + T+
Sbjct: 138 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L ++Y+ D+WS G + E+ T +++LF++ +
Sbjct: 198 RLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 251
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 45/218 (20%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR-YTHEVVT 228
Y ++ L H RI++RDLKP+NIL++ G ++++D GL A +P + V T
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL--AVHVPEGQTIKGRVGT 348
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+ Y PE++ + Y+ + D W+ GC+ EMI AG S Q R E+
Sbjct: 349 VGYMAPEVVKNER-YTFSPDWWALGCLLYEMI------AGQSPFQQ-----RKKKIKREE 396
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRV-----SAKTI 343
V V ++ PE ++FS P A + S+++ DP +R+ SA+ +
Sbjct: 397 VERLVKEV-------PEEYSERFS-------PQARSLCSQLLCKDPAERLGCRGGSAREV 442
Query: 344 LQHEYFNQVE-------MVKPTLAVFPELGYGGNGCKD 374
+H F ++ M++P P+ Y CKD
Sbjct: 443 KEHPLFKKLNFKRLGAGMLEPPFKPDPQAIY----CKD 476
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 19 STALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLK-DFLQTTPVPVPPALA 76
+ AL E +L+++ V+ L L LV + DLK P A A
Sbjct: 229 AMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARA 288
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR-YTHEV 135
Y ++ L H RI++RDLKP+NIL++ G ++++D GL A +P + V
Sbjct: 289 VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL--AVHVPEGQTIKGRV 346
Query: 136 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T+ Y PE++ + Y+ + D W+ GC+ EM
Sbjct: 347 GTVGYMAPEVVKNER-YTFSPDWWALGCLLYEM 378
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 36/203 (17%)
Query: 173 QLLEALRYCHSR-RIIHRDLKPQNILINKSGA------LKLADFGLSRAFTIPMNRYTHE 225
QLL L Y H R IIH D+KP+N+L+ + +K+AD G + + YT+
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD---EHYTNS 195
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDS------EIDQLFRIF 279
+ T YR PE+LLGA + DIWS C+ E+IT LF D + D + +I
Sbjct: 196 IQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII 254
Query: 280 RTLGT----------------PHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAV 323
LG + +SKL + + KFS+ + ++
Sbjct: 255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSK--DEAKEIS- 311
Query: 324 DVFSKIMALDPKQRVSAKTILQH 346
D S ++ LDP++R A ++ H
Sbjct: 312 DFLSPMLQLDPRKRADAGGLVNH 334
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 21/191 (10%)
Query: 2 VSDESRPRSRVQ-VEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDL 60
DE + RV + ++ +LK L H N P + +VFE L ++L
Sbjct: 62 AEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN-----HKGPNGVHVVMVFEVLGENL 116
Query: 61 KDFLQTTP-VPVPPALAKSYLYQLLEALRYCHSR-RIIHRDLKPQNILINKSGA------ 112
++ +P K QLL L Y H R IIH D+KP+N+L+ +
Sbjct: 117 LALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ 176
Query: 113 LKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM---S 169
+K+AD G + + YT+ + T YR PE+LLGA + DIWS C+ E+
Sbjct: 177 IKIADLGNACWYD---EHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGD 232
Query: 170 YLYQLLEALRY 180
+L++ E Y
Sbjct: 233 FLFEPDEGHSY 243
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 36/203 (17%)
Query: 173 QLLEALRYCHSR-RIIHRDLKPQNILINKSGA------LKLADFGLSRAFTIPMNRYTHE 225
QLL L Y H R IIH D+KP+N+L+ + +K+AD G + + YT+
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD---EHYTNS 195
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDS------EIDQLFRIF 279
+ T YR PE+LLGA + DIWS C+ E+IT LF D + D + +I
Sbjct: 196 IQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII 254
Query: 280 RTLGT----------------PHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAV 323
LG + +SKL + + KFS+ + ++
Sbjct: 255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSK--DEAKEIS- 311
Query: 324 DVFSKIMALDPKQRVSAKTILQH 346
D S ++ LDP++R A ++ H
Sbjct: 312 DFLSPMLQLDPRKRADAGGLVNH 334
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 21/191 (10%)
Query: 2 VSDESRPRSRVQ-VEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDL 60
DE + RV + ++ +LK L H N P + +VFE L ++L
Sbjct: 62 AEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN-----HKGPNGVHVVMVFEVLGENL 116
Query: 61 KDFLQTTP-VPVPPALAKSYLYQLLEALRYCHSR-RIIHRDLKPQNILINKSGA------ 112
++ +P K QLL L Y H R IIH D+KP+N+L+ +
Sbjct: 117 LALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ 176
Query: 113 LKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM---S 169
+K+AD G + + YT+ + T YR PE+LLGA + DIWS C+ E+
Sbjct: 177 IKIADLGNACWYD---EHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGD 232
Query: 170 YLYQLLEALRY 180
+L++ E Y
Sbjct: 233 FLFEPDEGHSY 243
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 45/218 (20%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR-YTHEVVT 228
Y ++ L H RI++RDLKP+NIL++ G ++++D GL A +P + V T
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL--AVHVPEGQTIKGRVGT 348
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
+ Y PE++ + Y+ + D W+ GC+ EMI AG S Q R E+
Sbjct: 349 VGYMAPEVVKNER-YTFSPDWWALGCLLYEMI------AGQSPFQQ-----RKKKIKREE 396
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRV-----SAKTI 343
V V ++ PE ++FS P A + S+++ DP +R+ SA+ +
Sbjct: 397 VERLVKEV-------PEEYSERFS-------PQARSLCSQLLCKDPAERLGCRGGSAREV 442
Query: 344 LQHEYFNQVE-------MVKPTLAVFPELGYGGNGCKD 374
+H F ++ M++P P+ Y CKD
Sbjct: 443 KEHPLFKKLNFKRLGAGMLEPPFKPDPQAIY----CKD 476
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 19 STALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLK-DFLQTTPVPVPPALA 76
+ AL E +L+++ V+ L L LV + DLK P A A
Sbjct: 229 AMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARA 288
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR-YTHEV 135
Y ++ L H RI++RDLKP+NIL++ G ++++D GL A +P + V
Sbjct: 289 VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL--AVHVPEGQTIKGRV 346
Query: 136 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T+ Y PE++ + Y+ + D W+ GC+ EM
Sbjct: 347 GTVGYMAPEVVKNER-YTFSPDWWALGCLLYEM 378
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 36/206 (17%)
Query: 4 DESRPRSRV------QVEGVPSTALREISVLKELKHPN------VIRLHDVIPVDFKLFL 51
D R +RV VE A EI+VL+++ + +++ D + +
Sbjct: 54 DHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCI 113
Query: 52 VFEFLRQDLKDFLQTTP-VPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNIL-IN- 108
FE L DFL+ +P P + +QL +A+++ H ++ H DLKP+NIL +N
Sbjct: 114 SFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNS 173
Query: 109 -----------------KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKV 151
KS A+++ DFG + T ++ V T YR PE++L
Sbjct: 174 DYELTYNLEKKRDERSVKSTAVRVVDFG---SATFDHEHHSTIVSTRHYRAPEVILELG- 229
Query: 152 YSTTVDIWSAGCIFSEMSYLYQLLEA 177
+S D+WS GCI E + L +
Sbjct: 230 WSQPCDVWSIGCIIFEYYVGFTLFQT 255
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 23/131 (17%)
Query: 172 YQLLEALRYCHSRRIIHRDLKPQNIL-IN------------------KSGALKLADFGLS 212
+QL +A+++ H ++ H DLKP+NIL +N KS A+++ DFG
Sbjct: 144 FQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFG-- 201
Query: 213 RAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
+ T ++ V T YR PE++L +S D+WS GCI E TLF
Sbjct: 202 -SATFDHEHHSTIVSTRHYRAPEVILELG-WSQPCDVWSIGCIIFEYYVGFTLFQTHDNR 259
Query: 273 DQLFRIFRTLG 283
+ L + R LG
Sbjct: 260 EHLAMMERILG 270
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 26/165 (15%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDL------------KDFLQTTPVP 70
E+ ++ ++K+ + +I ++++++E++ D K++ P+
Sbjct: 92 NELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ 151
Query: 71 VPPALAKSYLYQLLEALRYCHS-RRIIHRDLKPQNILINKSGALKLADFGLSRAFT---I 126
V + KS +L + Y H+ + I HRD+KP NIL++K+G +KL+DFG S I
Sbjct: 152 VIKCIIKS----VLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI 207
Query: 127 PMNRYTHEVVTLWYRPPEILLGAKVYS-TTVDIWSAGCIFSEMSY 170
+R T+E + PPE Y+ VDIWS G M Y
Sbjct: 208 KGSRGTYE-----FMPPEFFSNESSYNGAKVDIWSLGICLYVMFY 247
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 27/204 (13%)
Query: 150 KVYSTTVDIWSAGCIFSEMSYLYQLLEALRYCHS-RRIIHRDLKPQNILINKSGALKLAD 208
K Y+ + I CI +L + Y H+ + I HRD+KP NIL++K+G +KL+D
Sbjct: 142 KNYTCFIPIQVIKCIIK------SVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSD 195
Query: 209 FGLSRAFT---IPMNRYTHEVVTLWYRPPEILLGAKVYS-TTVDIWSAGCIFSEMITKKT 264
FG S I +R T+E + PPE Y+ VDIWS G M
Sbjct: 196 FGESEYMVDKKIKGSRGTYE-----FMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVV 250
Query: 265 LFAGDSEIDQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPE-WRPKKFSEILNLPDPLAV 323
F+ + +LF RT + P+ + F KK + N +
Sbjct: 251 PFSLKISLVELFNNIRTKNIEY----------PLDRNHFLYPLTNKKSTCSNNFLSNEDI 300
Query: 324 DVFSKIMALDPKQRVSAKTILQHE 347
D + +P +R++++ L+HE
Sbjct: 301 DFLKLFLRKNPAERITSEDALKHE 324
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH-ARFYA 168
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 225
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 226 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 256
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 167 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 223
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 224 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 265
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 11/159 (6%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
EISV+ +L H N+I+L+D + LV E++ +L D + + ++
Sbjct: 135 NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK 194
Query: 82 QLLEALRYCHSRRIIHRDLKPQNIL-INKSG-ALKLADFGLSRAFTIPMNRYTHEVVTLW 139
Q+ E +R+ H I+H DLKP+NIL +N+ +K+ DFGL+R + P + T
Sbjct: 195 QICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYK-PREKLKVNFGTPE 253
Query: 140 YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEAL 178
+ PE+ + S D+WS G I Y LL L
Sbjct: 254 FLAPEV-VNYDFVSFPTDMWSVGVI------AYMLLSGL 285
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRYCHSRRIIHRDLKPQNIL-INKSG 202
E + G +++ +D + ++ Q+ E +R+ H I+H DLKP+NIL +N+
Sbjct: 166 EYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDA 225
Query: 203 -ALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+K+ DFGL+R + P + T + PE+ + S D+WS G I +++
Sbjct: 226 KQIKIIDFGLARRYK-PREKLKVNFGTPEFLAPEV-VNYDFVSFPTDMWSVGVIAYMLLS 283
Query: 262 KKTLFAGDSEIDQLFRIF 279
+ F GD++ + L I
Sbjct: 284 GLSPFLGDNDAETLNNIL 301
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLAGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLAGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ E+ + +L+++LQ PP L
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR---PPGLE 134
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
Y YQ+ + Y S++ IHRDL +N+L+ + +K+ADF
Sbjct: 135 YCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 194
Query: 119 GLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L ++Y+ D+WS G + E+
Sbjct: 195 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEI 245
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHE 225
+S YQ+ + Y S++ IHRDL +N+L+ + +K+ADFGL+R + T+
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L ++Y+ D+WS G + E+ T +++LF++ +
Sbjct: 213 RLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 32/183 (17%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKS---GALKLADFGLSRAFTIPMNRYTHEVV-T 228
Q+LE + Y H I+H DLKPQNIL++ G +K+ DFG+SR I E++ T
Sbjct: 139 QILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK--IGHACELREIMGT 196
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHED 288
Y PEIL + +T D+W+ G I ++T + F G+ +++
Sbjct: 197 PEYLAPEILNYDPI-TTATDMWNIGIIAYMLLTHTSPFVGED---------------NQE 240
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+ +S++ + ++ + FS + LA D ++ +P++R +A+ L H +
Sbjct: 241 TYLNISQVNV------DYSEETFSSV----SQLATDFIQSLLVKNPEKRPTAEICLSHSW 290
Query: 349 FNQ 351
Q
Sbjct: 291 LQQ 293
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 22 LREISVLKELKH-PNVIRLHDVIPVDFKLFLVFEFLR--QDLKDFLQTTPVPVPPALAKS 78
L EI+VL+ K P VI LH+V ++ L+ E+ + L V
Sbjct: 76 LHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIR 135
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKS---GALKLADFGLSRAFTIPMNRYTHEV 135
+ Q+LE + Y H I+H DLKPQNIL++ G +K+ DFG+SR I E+
Sbjct: 136 LIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK--IGHACELREI 193
Query: 136 V-TLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ T Y PEIL + +T D+W+ G I
Sbjct: 194 MGTPEYLAPEILNYDPI-TTATDMWNIGII 222
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 33/205 (16%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAK--- 77
L E +VLK++ HP+VI+L+ D L L+ E+ + L+ FL+ + P L
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 78 --------------------SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
S+ +Q+ + ++Y ++HRDL +NIL+ + +K++D
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISD 193
Query: 118 FGLSRAF---TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYL--- 171
FGLSR + R + W + +Y+T D+WS G + E+ L
Sbjct: 194 FGLSRDVYEEDSXVKRSQGRIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 172 -YQLLEALRYCHSRRIIHRDLKPQN 195
Y + R + + HR +P N
Sbjct: 252 PYPGIPPERLFNLLKTGHRMERPDN 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF---TIPMNRYTH 224
+S+ +Q+ + ++Y ++HRDL +NIL+ + +K++DFGLSR + R
Sbjct: 153 ISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQG 212
Query: 225 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ W + +Y+T D+WS G + E++T
Sbjct: 213 RIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 84 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH-ARFYA 142
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 143 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 199
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 200 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 230
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 141 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 197
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 198 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 239
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH-ARFYA 148
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 205
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 236
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 203
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 245
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
+ E V+ +L HP +++L+ V + LV EF+ L D+L+T
Sbjct: 51 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMC 110
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+ E + Y +IHRDL +N L+ ++ +K++DFG++R F + ++YT T +
Sbjct: 111 LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFP 168
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ PE+ ++ YS+ D+WS G + E+
Sbjct: 169 VKWASPEVFSFSR-YSSKSDVWSFGVLMWEV 198
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 174 LLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW--- 230
+ E + Y +IHRDL +N L+ ++ +K++DFG++R F + ++YT T +
Sbjct: 113 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFPVK 170
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL 265
+ PE+ ++ YS+ D+WS G + E+ ++ +
Sbjct: 171 WASPEVFSFSR-YSSKSDVWSFGVLMWEVFSEGKI 204
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ + + +L+++L+ PP +
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARR---PPGME 141
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
SY YQL + Y S++ IHRDL +N+L+ ++ +K+ADF
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 119 GLSRAFTIP--MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L +VY+ D+WS G + E+
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEI 252
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP--MNRYTHE 225
+S YQL + Y S++ IHRDL +N+L+ ++ +K+ADFGL+R + T+
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L +VY+ D+WS G + E+ T +++LF++ +
Sbjct: 220 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADEPI 244
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYA 148
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 205
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 236
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 203
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 245
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ L + H R II+RDLKP+N+L++ G ++++D GL+ + T
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSE 271
+ PE+LLG + Y +VD ++ G EMI + F E
Sbjct: 354 GFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPFRARGE 394
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
Y Q++ L + H R II+RDLKP+N+L++ G ++++D GL+ + T
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ PE+LLG + Y +VD ++ G EM
Sbjct: 354 GFMAPELLLGEE-YDFSVDYFALGVTLYEM 382
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ L + H R II+RDLKP+N+L++ G ++++D GL+ + T
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSE 271
+ PE+LLG + Y +VD ++ G EMI + F E
Sbjct: 354 GFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPFRARGE 394
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
Y Q++ L + H R II+RDLKP+N+L++ G ++++D GL+ + T
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ PE+LLG + Y +VD ++ G EM
Sbjct: 354 GFMAPELLLGEE-YDFSVDYFALGVTLYEM 382
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYA 168
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 225
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 226 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 256
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 167 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 223
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 224 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 265
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E+ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N++I++ G +K+ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N++I++ G +K+ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 10/173 (5%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQD 59
K+ D+ + Q+E L E +L+ + P +++L + L++V E++ +
Sbjct: 65 KILDKQKVVKLKQIE----HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE 120
Query: 60 LKDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFG 119
+ L+ P A+ Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG
Sbjct: 121 MFSHLRRIGRFXEPH-ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 179
Query: 120 LSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
++ R T Y PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 180 FAKRVK---GRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 228
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 139 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 195
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 196 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E + + + P +++L + L++V E+ ++ L+ P A+ Y
Sbjct: 90 LNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPH-ARFYA 148
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +K+ADFG ++ R T Y
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---GRTWXLCGTPEY 205
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 236
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +K+ADFG ++ R T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---GRTWXLCGTP 203
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 245
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ L + H R II+RDLKP+N+L++ G ++++D GL+ + T
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSE 271
+ PE+LLG + Y +VD ++ G EMI + F E
Sbjct: 354 GFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPFRARGE 394
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
Y Q++ L + H R II+RDLKP+N+L++ G ++++D GL+ + T
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ PE+LLG + Y +VD ++ G EM
Sbjct: 354 GFMAPELLLGEE-YDFSVDYFALGVTLYEM 382
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYA 148
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 205
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 236
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 203
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 245
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYA 148
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 205
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 236
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 203
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 245
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLXGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLXGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 19/164 (11%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTP------VPVPPAL 75
RE +L L+H ++++ + V L +VFE+++ DL FL+ V P
Sbjct: 66 REAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQ 125
Query: 76 AKSYL---------YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-AFT 125
AK L Q+ + Y S+ +HRDL +N L+ + +K+ DFG+SR ++
Sbjct: 126 AKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYS 185
Query: 126 IPMNRY-THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
R H ++ + + PPE ++ K ++T D+WS G I E+
Sbjct: 186 TDYYRVGGHTMLPIRWMPPESIMYRK-FTTESDVWSFGVILWEI 228
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-AFTIPMNRY-THEVVTLW 230
Q+ + Y S+ +HRDL +N L+ + +K+ DFG+SR ++ R H ++ +
Sbjct: 141 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 200
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PPE ++ K ++T D+WS G I E+ T
Sbjct: 201 WMPPESIMYRK-FTTESDVWSFGVILWEIFT 230
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ L + H R II+RDLKP+N+L++ G ++++D GL+ + T
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSE 271
+ PE+LLG + Y +VD ++ G EMI + F E
Sbjct: 354 GFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPFRARGE 394
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
Y Q++ L + H R II+RDLKP+N+L++ G ++++D GL+ + T
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ PE+LLG + Y +VD ++ G EM
Sbjct: 354 GFMAPELLLGEE-YDFSVDYFALGVTLYEM 382
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E+ ++ L+ P A+ Y
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH-ARFYA 148
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N++I++ G +K+ DFG ++ R T Y
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTPEY 205
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 236
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N++I++ G +K+ DFG ++ R T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTP 203
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 245
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E+ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N++I++ G +++ DFGL++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N++I++ G +++ DFGL++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E+ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N++I++ G +K+ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N++I++ G +K+ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYA 148
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 205
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 236
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 203
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 245
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYA 148
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 205
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 236
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 203
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 245
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
+RE ++ +L +P ++RL V + L LV E L FL +P + L
Sbjct: 58 MREAQIMHQLDNPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELL 116
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+Q+ ++Y + +HRDL +N+L+ K++DFGLS+A + YT W
Sbjct: 117 HQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP 176
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGC-IFSEMSY 170
+ PE + + +S+ D+WS G ++ +SY
Sbjct: 177 LKWYAPEC-INFRKFSSRSDVWSYGVTMWEALSY 209
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
L+Q+ ++Y + +HRDL +N+L+ K++DFGLS+A + YT W
Sbjct: 116 LHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 175
Query: 231 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE + + +S+ D+WS G E ++
Sbjct: 176 PLKWYAPEC-INFRKFSSRSDVWSYGVTMWEALS 208
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 26/172 (15%)
Query: 19 STALREISVLKEL-KHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALA 76
S + E+ ++K + KH N+I L D L+++ + + +L+++L+ PP +
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARR---PPGME 141
Query: 77 KSY------------------LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADF 118
SY YQL + Y S++ IHRDL +N+L+ ++ +K+ADF
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 119 GLSRAFTIP--MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
GL+R + T+ + + + PE L +VY+ D+WS G + E+
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEI 252
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP--MNRYTHE 225
+S YQL + Y S++ IHRDL +N+L+ ++ +K+ADFGL+R + T+
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
+ + + PE L +VY+ D+WS G + E+ T +++LF++ +
Sbjct: 220 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPNVI L V+ + ++ EF+ L FL+ L
Sbjct: 82 LSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML 141
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTH------E 134
+ ++Y +HRDL +NIL+N + K++DFGLSR + T+ +
Sbjct: 142 RGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGK 201
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
+ W P I + +++ D+WS G + E MSY
Sbjct: 202 IPIRWTAPEAIQY--RKFTSASDVWSYGIVMWEVMSY 236
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTH--- 224
+ L + ++Y +HRDL +NIL+N + K++DFGLSR + T+
Sbjct: 138 VGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 197
Query: 225 ---EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 198 LGGKIPIRWTAPEAIQY--RKFTSASDVWSYGIVMWEVMS 235
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 10/173 (5%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-D 59
K+ D+ + Q+E L E +L+ + P +++L + L++V E++ +
Sbjct: 59 KILDKQKVVKLKQIE----HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE 114
Query: 60 LKDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFG 119
+ L+ P A+ Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG
Sbjct: 115 MFSHLRRIGRFSEPH-ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFG 173
Query: 120 LSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
++ R T Y PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 174 FAKRVK---GRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 222
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 133 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK---GRTWXLCGTP 189
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 190 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 231
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 10/173 (5%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQD 59
K+ D+ + Q+E L E +L+ + P +++L + L++V E++ +
Sbjct: 65 KILDKQKVVKLKQIE----HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE 120
Query: 60 LKDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFG 119
+ L+ P A+ Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG
Sbjct: 121 MFSHLRRIGRFSEPH-ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 179
Query: 120 LSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
++ R T Y PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 180 FAKRVK---GRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 228
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 139 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 195
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 196 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 237
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPN+IRL V+ +V E++ L FL+T L
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT----IPMNRYTHEVV 136
+ +RY +HRDL +N+L++ + K++DFGLSR ++
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIP 217
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W P I + +S+ D+WS G + E+
Sbjct: 218 IRWTAPEAIAF--RTFSSASDVWSFGVVMWEV 247
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 19/137 (13%)
Query: 164 IFSEMSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT----IPM 219
I + L + +RY +HRDL +N+L++ + K++DFGLSR
Sbjct: 150 IMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAX 209
Query: 220 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMI----------TKKTLFAGD 269
++ W P I + +S+ D+WS G + E++ T + +
Sbjct: 210 TTTGGKIPIRWTAPEAIAF--RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI--- 264
Query: 270 SEIDQLFRIFRTLGTPH 286
S +++ +R+ +G PH
Sbjct: 265 SSVEEGYRLPAPMGCPH 281
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 13/159 (8%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFL--QTTPVPVPPA 74
P L+E V+K+L+H +++L+ V+ + +++V E++ + L DFL +T P
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQ 281
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
L Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT
Sbjct: 282 LV-DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTAR 338
Query: 135 VVT----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
W P L G ++ D+WS G + +E++
Sbjct: 339 QGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELT 375
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 12/116 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---- 228
Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPI 345
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL----FAGDSEIDQLFRIFR 280
W P L G ++ D+WS G + +E+ TK + +DQ+ R +R
Sbjct: 346 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 399
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPN+I L V+ + +V E++ L FL+ L
Sbjct: 71 LGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGML 130
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNRYT---HEVV 136
+ ++Y +HRDL +NILIN + K++DFGLSR P YT ++
Sbjct: 131 RGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 190
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W P I + +++ D+WS G + E+
Sbjct: 191 IRWTAPEAIAF--RKFTSASDVWSYGIVMWEV 220
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNRYT--- 223
+ L + ++Y +HRDL +NILIN + K++DFGLSR P YT
Sbjct: 127 VGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 186
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 187 GKIPIRWTAPEAIAF--RKFTSASDVWSYGIVMWEVVS 222
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 13/159 (8%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFL--QTTPVPVPPA 74
P L+E V+K+L+H +++L+ V+ + +++V E++ + L DFL +T P
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVGEYMSKGSLLDFLKGETGKYLRLPQ 281
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
L Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT
Sbjct: 282 LV-DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTAR 338
Query: 135 VVT----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
W P L G ++ D+WS G + +E++
Sbjct: 339 QGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELT 375
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 12/116 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---- 228
Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPI 345
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL----FAGDSEIDQLFRIFR 280
W P L G ++ D+WS G + +E+ TK + +DQ+ R +R
Sbjct: 346 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 399
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYA 148
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWTLCGTPEY 205
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 236
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWTLCGTP 203
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 245
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 10/173 (5%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQD 59
K+ D+ + Q+E L E +L+ + P +++L + L++V E++ +
Sbjct: 58 KILDKQKVVKLKQIE----HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE 113
Query: 60 LKDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFG 119
+ L+ P A+ Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG
Sbjct: 114 MFSHLRRIGRFSEPH-ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 172
Query: 120 LSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
++ R T Y PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 173 FAKRVK---GRTWTLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 221
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 132 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWTLCGTP 188
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 189 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 230
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 13/159 (8%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFL--QTTPVPVPPA 74
P L+E V+K+L+H +++L+ V+ + +++V E++ + L DFL +T P
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQ 281
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
L Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT
Sbjct: 282 LV-DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTAR 338
Query: 135 VVT----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
W P L G ++ D+WS G + +E++
Sbjct: 339 QGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELT 375
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 12/116 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---- 228
Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPI 345
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL----FAGDSEIDQLFRIFR 280
W P L G ++ D+WS G + +E+ TK + +DQ+ R +R
Sbjct: 346 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 399
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 14/156 (8%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYA 168
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R TL
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGATWTLCG 221
Query: 140 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
Y PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 222 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 256
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R TL
Sbjct: 167 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGATWTL 219
Query: 230 W----YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 220 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 265
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 9/161 (5%)
Query: 12 VQVEGVPSTALREISVLKELKHPNVIRLHDVIPVD-FKLFLVFEFL-RQDLKDFLQTTPV 69
++ + L E SV+ +L+H N+++L VI + L++V E++ + L D+L++
Sbjct: 224 IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR 283
Query: 70 PV--PPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP 127
V L K L + EA+ Y +HRDL +N+L+++ K++DFGL++ +
Sbjct: 284 SVLGGDCLLKFSL-DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342
Query: 128 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ T ++ W P L K +ST D+WS G + E+
Sbjct: 343 QD--TGKLPVKWTAPEA--LREKKFSTKSDVWSFGILLWEI 379
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 31/170 (18%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ + + EA+ Y +HRDL +N+L+++ K++DFGL++ + + T ++
Sbjct: 292 LKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLP 349
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
W P L K +ST D+WS G + E+ + F P +
Sbjct: 350 VKWTAPEA--LREKKFSTKSDVWSFGILLWEIYS--------------FGRVPYPRIPLK 393
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQR 337
DV P V K YK D P+ P P DV LD R
Sbjct: 394 DVVPRVEK--GYKMDAPDGCP-----------PAVYDVMKNCWHLDAATR 430
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 41/188 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y +++ AL Y HSR +++RD+K +N++++K G +K+ DFGL + T
Sbjct: 115 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTP 174
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PE+L Y VD W G + EM+
Sbjct: 175 EYLAPEVLEDND-YGRAVDWWGLGVVMYEMM----------------------------- 204
Query: 290 WPGVSKLPIYKTDFPEWRPKKFSEILNLP---DPLAVDVFSKIMALDPKQRVS-----AK 341
+LP Y D E + P P A + + ++ DPKQR+ AK
Sbjct: 205 ---CGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAK 261
Query: 342 TILQHEYF 349
+++H +F
Sbjct: 262 EVMEHRFF 269
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQL 83
E VL+ +HP + L +L V E+ F + A+ Y ++
Sbjct: 60 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 119
Query: 84 LEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPP 143
+ AL Y HSR +++RD+K +N++++K G +K+ DFGL + T Y P
Sbjct: 120 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 179
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEM 168
E+L Y VD W G + EM
Sbjct: 180 EVLEDND-YGRAVDWWGLGVVMYEM 203
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 9/161 (5%)
Query: 12 VQVEGVPSTALREISVLKELKHPNVIRLHDVIPVD-FKLFLVFEFL-RQDLKDFLQTTPV 69
++ + L E SV+ +L+H N+++L VI + L++V E++ + L D+L++
Sbjct: 52 IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR 111
Query: 70 PV--PPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP 127
V L K L + EA+ Y +HRDL +N+L+++ K++DFGL++ +
Sbjct: 112 SVLGGDCLLKFSL-DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170
Query: 128 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ T ++ W P L K +ST D+WS G + E+
Sbjct: 171 QD--TGKLPVKWTAPEA--LREKKFSTKSDVWSFGILLWEI 207
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 20/148 (13%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ + + EA+ Y +HRDL +N+L+++ K++DFGL++ + + T ++
Sbjct: 120 LKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLP 177
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
W P L K +ST D+WS G + E+ + F P +
Sbjct: 178 VKWTAPEA--LREKKFSTKSDVWSFGILLWEIYS--------------FGRVPYPRIPLK 221
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEIL 315
DV P V K YK D P+ P E++
Sbjct: 222 DVVPRVEK--GYKMDAPDGCPPAVYEVM 247
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 13/159 (8%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFL--QTTPVPVPPA 74
P L+E V+K+L+H +++L+ V+ + +++V E++ + L DFL +T P
Sbjct: 306 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQ 364
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE 134
L Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT
Sbjct: 365 LV-DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTAR 421
Query: 135 VVT----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
W P L G ++ D+WS G + +E++
Sbjct: 422 QGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELT 458
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 12/116 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---- 228
Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT
Sbjct: 371 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPI 428
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL----FAGDSEIDQLFRIFR 280
W P L G ++ D+WS G + +E+ TK + +DQ+ R +R
Sbjct: 429 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 482
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 41/188 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y +++ AL Y HSR +++RD+K +N++++K G +K+ DFGL + T
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTP 169
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PE+L Y VD W G + EM+
Sbjct: 170 EYLAPEVLEDND-YGRAVDWWGLGVVMYEMM----------------------------- 199
Query: 290 WPGVSKLPIYKTDFPEWRPKKFSEILNLP---DPLAVDVFSKIMALDPKQRVS-----AK 341
+LP Y D E + P P A + + ++ DPKQR+ AK
Sbjct: 200 ---CGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAK 256
Query: 342 TILQHEYF 349
+++H +F
Sbjct: 257 EVMEHRFF 264
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQL 83
E VL+ +HP + L +L V E+ F + A+ Y ++
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 84 LEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPP 143
+ AL Y HSR +++RD+K +N++++K G +K+ DFGL + T Y P
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 174
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEM 168
E+L Y VD W G + EM
Sbjct: 175 EVLEDND-YGRAVDWWGLGVVMYEM 198
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 9/161 (5%)
Query: 12 VQVEGVPSTALREISVLKELKHPNVIRLHDVIPVD-FKLFLVFEFL-RQDLKDFLQTTPV 69
++ + L E SV+ +L+H N+++L VI + L++V E++ + L D+L++
Sbjct: 37 IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR 96
Query: 70 PV--PPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP 127
V L K L + EA+ Y +HRDL +N+L+++ K++DFGL++ +
Sbjct: 97 SVLGGDCLLKFSL-DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155
Query: 128 MNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ T ++ W P L K +ST D+WS G + E+
Sbjct: 156 QD--TGKLPVKWTAPEA--LREKKFSTKSDVWSFGILLWEI 192
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 20/148 (13%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ + + EA+ Y +HRDL +N+L+++ K++DFGL++ + + T ++
Sbjct: 105 LKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLP 162
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
W P L K +ST D+WS G + E+ + F P +
Sbjct: 163 VKWTAPEA--LREKKFSTKSDVWSFGILLWEIYS--------------FGRVPYPRIPLK 206
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEIL 315
DV P V K YK D P+ P E++
Sbjct: 207 DVVPRVEK--GYKMDAPDGCPPAVYEVM 232
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFL--QTTPVPVPPA 74
P L+E V+K+L+H +++L+ V+ + +++V E++ + L DFL +T P
Sbjct: 50 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQ 108
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT-- 132
L Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT
Sbjct: 109 LV-DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTAR 165
Query: 133 --HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ W P L G ++ D+WS G + +E++
Sbjct: 166 QGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELT 202
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT +
Sbjct: 115 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPI 172
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL----FAGDSEIDQLFRIFR 280
W P L G ++ D+WS G + +E+ TK + +DQ+ R +R
Sbjct: 173 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 226
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 41/188 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y +++ AL Y HSR +++RD+K +N++++K G +K+ DFGL + T
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTP 169
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PE+L Y VD W G + EM+
Sbjct: 170 EYLAPEVLEDND-YGRAVDWWGLGVVMYEMM----------------------------- 199
Query: 290 WPGVSKLPIYKTDFPEWRPKKFSEILNLP---DPLAVDVFSKIMALDPKQRVS-----AK 341
+LP Y D E + P P A + + ++ DPKQR+ AK
Sbjct: 200 ---CGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAK 256
Query: 342 TILQHEYF 349
+++H +F
Sbjct: 257 EVMEHRFF 264
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQL 83
E VL+ +HP + L +L V E+ F + A+ Y ++
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 84 LEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPP 143
+ AL Y HSR +++RD+K +N++++K G +K+ DFGL + T Y P
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 174
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEM 168
E+L Y VD W G + EM
Sbjct: 175 EVLEDND-YGRAVDWWGLGVVMYEM 198
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 41/188 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y +++ AL Y HSR +++RD+K +N++++K G +K+ DFGL + T
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTP 169
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PE+L Y VD W G + EM+
Sbjct: 170 EYLAPEVLEDND-YGRAVDWWGLGVVMYEMM----------------------------- 199
Query: 290 WPGVSKLPIYKTDFPEWRPKKFSEILNLP---DPLAVDVFSKIMALDPKQRVS-----AK 341
+LP Y D E + P P A + + ++ DPKQR+ AK
Sbjct: 200 ---CGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAK 256
Query: 342 TILQHEYF 349
+++H +F
Sbjct: 257 EVMEHRFF 264
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQL 83
E VL+ +HP + L +L V E+ F + A+ Y ++
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 84 LEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPP 143
+ AL Y HSR +++RD+K +N++++K G +K+ DFGL + T Y P
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 174
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEM 168
E+L Y VD W G + EM
Sbjct: 175 EVLEDND-YGRAVDWWGLGVVMYEM 198
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 38/213 (17%)
Query: 172 YQLLEALRYCHSRRIIHRDLKPQNILINKSG-------------------ALKLADFGLS 212
YQ+ +++ + HS ++ H DLKP+NIL +S +K+ DFG
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG-- 182
Query: 213 RAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
+ T ++ V YR PE++L A +S D+WS GCI E T+F
Sbjct: 183 -SATYDDEHHSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240
Query: 273 DQLFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEW--------------RP-KKFSEILNL 317
+ L + R LG + + K + D +W +P K+F ++
Sbjct: 241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDV 300
Query: 318 PDPLAVDVFSKIMALDPKQRVSAKTILQHEYFN 350
D+ K++ DP +R++ + L+H +F+
Sbjct: 301 EHERLFDLIQKMLEYDPAKRITLREALKHPFFD 333
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 41/184 (22%)
Query: 9 RSRVQV-----EGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDF 63
RS +QV P++ R + +L+ +H I +VFE L DF
Sbjct: 59 RSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI------------CIVFELLGLSTYDF 106
Query: 64 LQTTP-VPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSG----------- 111
++ +P + YQ+ +++ + HS ++ H DLKP+NIL +S
Sbjct: 107 IKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKR 166
Query: 112 --------ALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGC 163
+K+ DFG + T ++ V YR PE++L A +S D+WS GC
Sbjct: 167 DERTLINPDIKVVDFG---SATYDDEHHSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGC 222
Query: 164 IFSE 167
I E
Sbjct: 223 ILIE 226
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 11/173 (6%)
Query: 24 EISVLKELKHPNVIRLHDVIPVD--FKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
EI++L ++H N+I++ D+ F+L + DL F+ P P LA
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEP-LASYIFR 137
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 141
QL+ A+ Y + IIHRD+K +NI+I + +KL DFG S A+ + T+ Y
Sbjct: 138 QLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFG-SAAYLERGKLFYTFCGTIEYC 196
Query: 142 PPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL-EALRYCHSRRIIHRDLKP 193
PE+L+G +++WS G LY L+ E +C + + P
Sbjct: 197 APEVLMGNPYRGPELEMWSLGVT------LYTLVFEENPFCELEETVEAAIHP 243
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 169 SYLY-QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
SY++ QL+ A+ Y + IIHRD+K +NI+I + +KL DFG S A+ +
Sbjct: 133 SYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFG-SAAYLERGKLFYTFCG 191
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFA 267
T+ Y PE+L+G +++WS G ++ ++ F
Sbjct: 192 TIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFC 231
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 41/188 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y +++ AL Y HSR +++RD+K +N++++K G +K+ DFGL + T
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 169
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PE+L Y VD W G + EM+
Sbjct: 170 EYLAPEVLEDND-YGRAVDWWGLGVVMYEMM----------------------------- 199
Query: 290 WPGVSKLPIYKTDFPEWRPKKFSEILNLP---DPLAVDVFSKIMALDPKQRVS-----AK 341
+LP Y D E + P P A + + ++ DPKQR+ AK
Sbjct: 200 ---CGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAK 256
Query: 342 TILQHEYF 349
+++H +F
Sbjct: 257 EVMEHRFF 264
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQL 83
E VL+ +HP + L +L V E+ F + A+ Y ++
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 84 LEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPP 143
+ AL Y HSR +++RD+K +N++++K G +K+ DFGL + T Y P
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAP 174
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEM 168
E+L Y VD W G + EM
Sbjct: 175 EVLEDND-YGRAVDWWGLGVVMYEM 198
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 15/160 (9%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTP---VPVPP 73
P L+E V+K+L+H +++L+ V+ + +++V E++ + L DFL+ + +P
Sbjct: 54 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQ 112
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT- 132
+ S Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT
Sbjct: 113 LVDMSA--QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTA 168
Query: 133 ---HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ W P L G ++ D+WS G + +E++
Sbjct: 169 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELT 206
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT +
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPI 176
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL----FAGDSEIDQLFRIFR 280
W P L G ++ D+WS G + +E+ TK + +DQ+ R +R
Sbjct: 177 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 230
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 41/188 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y +++ AL Y HSR +++RD+K +N++++K G +K+ DFGL + T
Sbjct: 113 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 172
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PE+L Y VD W G + EM+
Sbjct: 173 EYLAPEVLEDND-YGRAVDWWGLGVVMYEMM----------------------------- 202
Query: 290 WPGVSKLPIYKTDFPEWRPKKFSEILNLP---DPLAVDVFSKIMALDPKQRVS-----AK 341
+LP Y D E + P P A + + ++ DPKQR+ AK
Sbjct: 203 ---CGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAK 259
Query: 342 TILQHEYF 349
+++H +F
Sbjct: 260 EVMEHRFF 267
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQL 83
E VL+ +HP + L +L V E+ F + A+ Y ++
Sbjct: 58 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 117
Query: 84 LEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPP 143
+ AL Y HSR +++RD+K +N++++K G +K+ DFGL + T Y P
Sbjct: 118 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAP 177
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEM 168
E+L Y VD W G + EM
Sbjct: 178 EVLEDND-YGRAVDWWGLGVVMYEM 201
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + +M+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYQMAAGY 235
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + +M F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYQMAAGYPPFFADQPI 244
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 41/188 (21%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y +++ AL Y HSR +++RD+K +N++++K G +K+ DFGL + T
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 169
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDV 289
Y PE+L Y VD W G + EM+
Sbjct: 170 EYLAPEVLEDND-YGRAVDWWGLGVVMYEMM----------------------------- 199
Query: 290 WPGVSKLPIYKTDFPEWRPKKFSEILNLP---DPLAVDVFSKIMALDPKQRVS-----AK 341
+LP Y D E + P P A + + ++ DPKQR+ AK
Sbjct: 200 ---CGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAK 256
Query: 342 TILQHEYF 349
+++H +F
Sbjct: 257 EVMEHRFF 264
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQL 83
E VL+ +HP + L +L V E+ F + A+ Y ++
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 84 LEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPP 143
+ AL Y HSR +++RD+K +N++++K G +K+ DFGL + T Y P
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAP 174
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEM 168
E+L Y VD W G + EM
Sbjct: 175 EVLEDND-YGRAVDWWGLGVVMYEM 198
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P + +L + L++V E+ ++ L+ P A+ Y
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPH-ARFYA 148
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N++I++ G +K+ DFG ++ R T Y
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTPEY 205
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 236
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N++I++ G +K+ DFG ++ R T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTP 203
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 245
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E+ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N++I++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N++I++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P + +L + L++V E+ ++ L+ P A+ Y
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH-ARFYA 148
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N++I++ G +K+ DFG ++ R T Y
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTPEY 205
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 236
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N++I++ G +K+ DFG ++ R T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTP 203
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 245
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 36/192 (18%)
Query: 165 FSE---MSYLYQLLEALRYCHSRRIIHRDLKPQNIL-INKSG---ALKLADFGLSRAFTI 217
FSE + L+ + + + Y H++ ++HRDLKP NIL +++SG ++++ DFG ++
Sbjct: 113 FSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172
Query: 218 PMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAG---DSEIDQ 274
T + PE+ L + Y DIWS G + +T T FA D+ +
Sbjct: 173 ENGLLXTPCYTANFVAPEV-LERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEI 231
Query: 275 LFRIFRTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDP 334
L RI + W VS A D+ SK + +DP
Sbjct: 232 LARIGSGKFSLSGGYWNSVSD-------------------------TAKDLVSKXLHVDP 266
Query: 335 KQRVSAKTILQH 346
QR++A +L+H
Sbjct: 267 HQRLTAALVLRH 278
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Query: 27 VLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLE 85
+L+ +HPN+I L DV +++V E + +L D + A + L+ + +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF-FSEREASAVLFTITK 127
Query: 86 ALRYCHSRRIIHRDLKPQNIL-INKSG---ALKLADFGLSRAFTIPMNRYTHEVVTLWYR 141
+ Y H++ ++HRDLKP NIL +++SG ++++ DFG ++ T +
Sbjct: 128 TVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFV 187
Query: 142 PPEILLGAKVYSTTVDIWSAGCIF 165
PE+ L + Y DIWS G +
Sbjct: 188 APEV-LERQGYDAACDIWSLGVLL 210
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 9/151 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVD-FKLFLVFEFL-RQDLKDFLQTTPVPV--PPALAK 77
L E SV+ +L+H N+++L VI + L++V E++ + L D+L++ V L K
Sbjct: 53 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 112
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT 137
L + EA+ Y +HRDL +N+L+++ K++DFGL++ + + T ++
Sbjct: 113 FSL-DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPV 169
Query: 138 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W P + A +ST D+WS G + E+
Sbjct: 170 KWTAPEALREAA--FSTKSDVWSFGILLWEI 198
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 20/148 (13%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ + + EA+ Y +HRDL +N+L+++ K++DFGL++ + + T ++
Sbjct: 111 LKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLP 168
Query: 228 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHE 287
W P + A +ST D+WS G + E+ + F P +
Sbjct: 169 VKWTAPEALREAA--FSTKSDVWSFGILLWEIYS--------------FGRVPYPRIPLK 212
Query: 288 DVWPGVSKLPIYKTDFPEWRPKKFSEIL 315
DV P V K YK D P+ P E++
Sbjct: 213 DVVPRVEK--GYKMDAPDGCPPAVYEVM 238
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 35/200 (17%)
Query: 167 EMSYLYQ-LLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNR- 221
E S + Q + AL + H++ I HRDLKP+NIL N+ +K+ DFGL + +
Sbjct: 112 EASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCS 171
Query: 222 --YTHEVVT----LWYRPPEILLG----AKVYSTTVDIWSAGCIFSEMITKKTLFAGDSE 271
T E++T Y PE++ A +Y D+WS G I +++ F G
Sbjct: 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG--- 228
Query: 272 IDQLFRIFRTLGTPHEDVWPGVSKLPIY-----KTDFPEWRPKKFSEILNLPDPLAVDVF 326
R G + P + K +FP+ K ++ I A D+
Sbjct: 229 -----RCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD---KDWAHI----SCAAKDLI 276
Query: 327 SKIMALDPKQRVSAKTILQH 346
SK++ D KQR+SA +LQH
Sbjct: 277 SKLLVRDAKQRLSAAQVLQH 296
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 15/164 (9%)
Query: 17 VPSTALREISVLKELK-HPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
+ S RE+ +L + + H NV+ L + + + +LVFE +R
Sbjct: 53 IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELE 112
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNR-- 130
A + + AL + H++ I HRDLKP+NIL N+ +K+ DFGL + +
Sbjct: 113 ASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSP 172
Query: 131 -YTHEVVT----LWYRPPEILLG----AKVYSTTVDIWSAGCIF 165
T E++T Y PE++ A +Y D+WS G I
Sbjct: 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P + +L + L++V E+ ++ L+ P A+ Y
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH-ARFYA 148
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N++I++ G +K+ DFG ++ R T Y
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTPEY 205
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 236
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N++I++ G +K+ DFG ++ R T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTP 203
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 245
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N++I++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
PEI++ +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPEIII-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N++I++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y PEI++ +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPEIII-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 15/160 (9%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTP---VPVPP 73
P L+E V+K+L+H +++L+ V+ + +++V E++ + L DFL+ + +P
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQ 115
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT- 132
+ + Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT
Sbjct: 116 LVDMAA--QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTA 171
Query: 133 ---HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ W P L G ++ D+WS G + +E++
Sbjct: 172 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELT 209
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPI 179
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL----FAGDSEIDQLFRIFR 280
W P L G ++ D+WS G + +E+ TK + +DQ+ R +R
Sbjct: 180 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPN+I L V+ + ++ E++ L FL+ L
Sbjct: 78 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 137
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT---HEVV 136
+ ++Y +HRDL +NIL+N + K++DFG+SR P YT ++
Sbjct: 138 RGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 197
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
W P I + +++ D+WS G + E MSY
Sbjct: 198 IRWTAPEAIAY--RKFTSASDVWSYGIVMWEVMSY 230
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF-TIPMNRYT--- 223
+ L + ++Y +HRDL +NIL+N + K++DFG+SR P YT
Sbjct: 134 VGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 193
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 194 GKIPIRWTAPEAIAY--RKFTSASDVWSYGIVMWEVMS 229
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPN+I L V+ + ++ E++ L FL+ L
Sbjct: 63 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 122
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNRYT---HEVV 136
+ ++Y +HRDL +NIL+N + K++DFG+SR P YT ++
Sbjct: 123 RGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 182
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
W P I + +++ D+WS G + E MSY
Sbjct: 183 IRWTAPEAIAY--RKFTSASDVWSYGIVMWEVMSY 215
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNRYT--- 223
+ L + ++Y +HRDL +NIL+N + K++DFG+SR P YT
Sbjct: 119 VGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 178
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 179 GKIPIRWTAPEAIAY--RKFTSASDVWSYGIVMWEVMS 214
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 15/160 (9%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTP---VPVPP 73
P L+E V+K+L+H +++L+ V+ + +++V E++ + L DFL+ + +P
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQ 115
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT- 132
+ + Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT
Sbjct: 116 LVDMAA--QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTA 171
Query: 133 ---HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ W P L G ++ D+WS G + +E++
Sbjct: 172 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELT 209
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPI 179
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL----FAGDSEIDQLFRIFR 280
W P L G ++ D+WS G + +E+ TK + +DQ+ R +R
Sbjct: 180 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Query: 36 VIRLHDVIPVDFKLFLVFEF-LRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRR 94
+ LH D L+LV ++ + DL L +P +A+ YL +++ A+ H
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 95 IIHRDLKPQNILINKSGALKLADFGLS-RAFTIPMNRYTHEVVTLWYRPPEILL----GA 149
+HRD+KP NIL++ +G ++LADFG + + + V T Y PEIL G
Sbjct: 196 YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGK 255
Query: 150 KVYSTTVDIWSAGCIFSEMSY 170
Y D WS G EM Y
Sbjct: 256 GRYGPECDWWSLGVCMYEMLY 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLS-RAFTIPMNRYTHEVVT 228
YL +++ A+ H +HRD+KP NIL++ +G ++LADFG + + + V T
Sbjct: 180 YLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGT 239
Query: 229 LWYRPPEILL----GAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
Y PEIL G Y D WS G EM+ +T F +S ++ +I
Sbjct: 240 PDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 45/201 (22%)
Query: 164 IFSEMS---YLYQLLEALRYCHSRR-IIHRDLKPQNILINKSGALKLADFGLSRAFTIPM 219
+FSE Y +++ AL Y HS + +++RDLK +N++++K G +K+ DFGL +
Sbjct: 106 VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 165
Query: 220 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIF 279
T Y PE+L Y VD W G + EM+
Sbjct: 166 ATMKXFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMM------------------- 205
Query: 280 RTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLP---DPLAVDVFSKIMALDPKQ 336
+LP Y D + E + P P A + S ++ DPKQ
Sbjct: 206 -------------CGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQ 252
Query: 337 RVS-----AKTILQHEYFNQV 352
R+ AK I+QH +F +
Sbjct: 253 RLGGGSEDAKEIMQHRFFAGI 273
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E VL+ +HP + L +L V E+ F + A+ Y
Sbjct: 58 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 117
Query: 82 QLLEALRYCHSRR-IIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
+++ AL Y HS + +++RDLK +N++++K G +K+ DFGL + T Y
Sbjct: 118 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEY 177
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEM 168
PE+L Y VD W G + EM
Sbjct: 178 LAPEVLEDND-YGRAVDWWGLGVVMYEM 204
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 45/201 (22%)
Query: 164 IFSEMS---YLYQLLEALRYCHSRR-IIHRDLKPQNILINKSGALKLADFGLSRAFTIPM 219
+FSE Y +++ AL Y HS + +++RDLK +N++++K G +K+ DFGL +
Sbjct: 104 VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 163
Query: 220 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIF 279
T Y PE+L Y VD W G + EM+
Sbjct: 164 ATMKXFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMM------------------- 203
Query: 280 RTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLP---DPLAVDVFSKIMALDPKQ 336
+LP Y D + E + P P A + S ++ DPKQ
Sbjct: 204 -------------CGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQ 250
Query: 337 RVS-----AKTILQHEYFNQV 352
R+ AK I+QH +F +
Sbjct: 251 RLGGGSEDAKEIMQHRFFAGI 271
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E VL+ +HP + L +L V E+ F + A+ Y
Sbjct: 56 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 115
Query: 82 QLLEALRYCHSRR-IIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
+++ AL Y HS + +++RDLK +N++++K G +K+ DFGL + T Y
Sbjct: 116 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEY 175
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEM 168
PE+L Y VD W G + EM
Sbjct: 176 LAPEVLEDND-YGRAVDWWGLGVVMYEM 202
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 45/201 (22%)
Query: 164 IFSEMS---YLYQLLEALRYCHSRR-IIHRDLKPQNILINKSGALKLADFGLSRAFTIPM 219
+FSE Y +++ AL Y HS + +++RDLK +N++++K G +K+ DFGL +
Sbjct: 105 VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 164
Query: 220 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIF 279
T Y PE+L Y VD W G + EM+
Sbjct: 165 ATMKXFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMM------------------- 204
Query: 280 RTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLP---DPLAVDVFSKIMALDPKQ 336
+LP Y D + E + P P A + S ++ DPKQ
Sbjct: 205 -------------CGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQ 251
Query: 337 RVS-----AKTILQHEYFNQV 352
R+ AK I+QH +F +
Sbjct: 252 RLGGGSEDAKEIMQHRFFAGI 272
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E VL+ +HP + L +L V E+ F + A+ Y
Sbjct: 57 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 116
Query: 82 QLLEALRYCHSRR-IIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
+++ AL Y HS + +++RDLK +N++++K G +K+ DFGL + T Y
Sbjct: 117 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEY 176
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEM 168
PE+L Y VD W G + EM
Sbjct: 177 LAPEVLEDND-YGRAVDWWGLGVVMYEM 203
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T Y
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEY 204
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
P I+L +K Y+ VD W+ G + EM+ Y
Sbjct: 205 LAPAIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTP 202
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
Y P I+L +K Y+ VD W+ G + EM F D I
Sbjct: 203 EYLAPAIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPN+I L V+ + ++ E++ L FL+ L
Sbjct: 57 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 116
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNRYT---HEVV 136
+ ++Y +HRDL +NIL+N + K++DFG+SR P YT ++
Sbjct: 117 RGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 176
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
W P I + +++ D+WS G + E MSY
Sbjct: 177 IRWTAPEAIAY--RKFTSASDVWSYGIVMWEVMSY 209
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNRYT--- 223
+ L + ++Y +HRDL +NIL+N + K++DFG+SR P YT
Sbjct: 113 VGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 172
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 173 GKIPIRWTAPEAIAY--RKFTSASDVWSYGIVMWEVMS 208
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 45/201 (22%)
Query: 164 IFSEMS---YLYQLLEALRYCHSRR-IIHRDLKPQNILINKSGALKLADFGLSRAFTIPM 219
+FSE Y +++ AL Y HS + +++RDLK +N++++K G +K+ DFGL +
Sbjct: 244 VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303
Query: 220 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIF 279
T Y PE+L Y VD W G + EM+
Sbjct: 304 ATMKTFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMM------------------- 343
Query: 280 RTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLP---DPLAVDVFSKIMALDPKQ 336
+LP Y D + E + P P A + S ++ DPKQ
Sbjct: 344 -------------CGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQ 390
Query: 337 RVS-----AKTILQHEYFNQV 352
R+ AK I+QH +F +
Sbjct: 391 RLGGGSEDAKEIMQHRFFAGI 411
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E VL+ +HP + L +L V E+ F + A+ Y
Sbjct: 196 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 255
Query: 82 QLLEALRYCHSRR-IIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
+++ AL Y HS + +++RDLK +N++++K G +K+ DFGL + T Y
Sbjct: 256 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEY 315
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEM 168
PE+L Y VD W G + EM
Sbjct: 316 LAPEVLEDND-YGRAVDWWGLGVVMYEM 342
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 45/201 (22%)
Query: 164 IFSEMS---YLYQLLEALRYCHSRR-IIHRDLKPQNILINKSGALKLADFGLSRAFTIPM 219
+FSE Y +++ AL Y HS + +++RDLK +N++++K G +K+ DFGL +
Sbjct: 247 VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 306
Query: 220 NRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIF 279
T Y PE+L Y VD W G + EM+
Sbjct: 307 ATMKTFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMM------------------- 346
Query: 280 RTLGTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLP---DPLAVDVFSKIMALDPKQ 336
+LP Y D + E + P P A + S ++ DPKQ
Sbjct: 347 -------------CGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQ 393
Query: 337 RVS-----AKTILQHEYFNQV 352
R+ AK I+QH +F +
Sbjct: 394 RLGGGSEDAKEIMQHRFFAGI 414
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E VL+ +HP + L +L V E+ F + A+ Y
Sbjct: 199 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 258
Query: 82 QLLEALRYCHSRR-IIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
+++ AL Y HS + +++RDLK +N++++K G +K+ DFGL + T Y
Sbjct: 259 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEY 318
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEM 168
PE+L Y VD W G + EM
Sbjct: 319 LAPEVLEDND-YGRAVDWWGLGVVMYEM 345
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQT--------------T 67
RE +L L+H +++R V L +VFE++R DL FL++
Sbjct: 92 REAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVA 151
Query: 68 PVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-AFTI 126
P P+ + Q+ + Y +HRDL +N L+ + +K+ DFG+SR ++
Sbjct: 152 PGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 211
Query: 127 PMNRYTHE-VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
R ++ + + PPE +L K ++T D+WS G + E+
Sbjct: 212 DYYRVGGRTMLPIRWMPPESILYRK-FTTESDVWSFGVVLWEI 253
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-AFTIPMNRYTHE-VVTLW 230
Q+ + Y +HRDL +N L+ + +K+ DFG+SR ++ R ++ +
Sbjct: 166 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PPE +L K ++T D+WS G + E+ T
Sbjct: 226 WMPPESILYRK-FTTESDVWSFGVVLWEIFT 255
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 32 KHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCH 91
HP + +L +LF V EF+ F A A+ Y +++ AL + H
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH 141
Query: 92 SRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKV 151
+ II+RDLK N+L++ G KLADFG+ + T Y PEIL +
Sbjct: 142 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQ-EML 200
Query: 152 YSTTVDIWSAGCIFSEMSYLYQLLEA 177
Y VD W+ G + EM + EA
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAPFEA 226
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y +++ AL + H + II+RDLK N+L++ G KLADFG+ + T
Sbjct: 129 YAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTP 188
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFR 277
Y PEIL +Y VD W+ G + EM+ F ++E D LF
Sbjct: 189 DYIAPEILQ-EMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE-DDLFE 234
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 20/158 (12%)
Query: 22 LREISVLKELKHPNVIRLHDVI---PVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPP 73
+RE++ + L H N+IRL+ V+ P+ L + + LR+ FL T
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT------ 116
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT- 132
Y Q+ E + Y S+R IHRDL +N+L+ +K+ DFGL RA + Y
Sbjct: 117 --LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 174
Query: 133 --HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
H V + PE L + +S D W G EM
Sbjct: 175 QEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEM 211
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT---HEV 226
Y Q+ E + Y S+R IHRDL +N+L+ +K+ DFGL RA + Y H
Sbjct: 120 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V + PE L + +S D W G EM T
Sbjct: 180 VPFAWCAPES-LKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 20/158 (12%)
Query: 22 LREISVLKELKHPNVIRLHDVI---PVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPP 73
+RE++ + L H N+IRL+ V+ P+ L + + LR+ FL T
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT------ 122
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT- 132
Y Q+ E + Y S+R IHRDL +N+L+ +K+ DFGL RA + Y
Sbjct: 123 --LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 180
Query: 133 --HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
H V + PE L + +S D W G EM
Sbjct: 181 QEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEM 217
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT---HEV 226
Y Q+ E + Y S+R IHRDL +N+L+ +K+ DFGL RA + Y H
Sbjct: 126 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 185
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V + PE L + +S D W G EM T
Sbjct: 186 VPFAWCAPES-LKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 15/160 (9%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTP---VPVPP 73
P L+E V+K+L+H +++L+ V+ + +++V E++ + L DFL+ + +P
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQ 115
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT- 132
+ + Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT
Sbjct: 116 LVDMAA--QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTA 171
Query: 133 ---HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ W P L G ++ D+WS G + +E++
Sbjct: 172 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELT 209
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPI 179
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL----FAGDSEIDQLFRIFR 280
W P L G ++ D+WS G + +E+ TK + +DQ+ R +R
Sbjct: 180 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 20/158 (12%)
Query: 22 LREISVLKELKHPNVIRLHDVI---PVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPP 73
+RE++ + L H N+IRL+ V+ P+ L + + LR+ FL T
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT------ 112
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT- 132
Y Q+ E + Y S+R IHRDL +N+L+ +K+ DFGL RA + Y
Sbjct: 113 --LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 170
Query: 133 --HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
H V + PE L + +S D W G EM
Sbjct: 171 QEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEM 207
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT---HEV 226
Y Q+ E + Y S+R IHRDL +N+L+ +K+ DFGL RA + Y H
Sbjct: 116 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V + PE L + +S D W G EM T
Sbjct: 176 VPFAWCAPES-LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 20/158 (12%)
Query: 22 LREISVLKELKHPNVIRLHDVI---PVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPP 73
+RE++ + L H N+IRL+ V+ P+ L + + LR+ FL T
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT------ 116
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT- 132
Y Q+ E + Y S+R IHRDL +N+L+ +K+ DFGL RA + Y
Sbjct: 117 --LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 174
Query: 133 --HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
H V + PE L + +S D W G EM
Sbjct: 175 QEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEM 211
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT---HEV 226
Y Q+ E + Y S+R IHRDL +N+L+ +K+ DFGL RA + Y H
Sbjct: 120 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V + PE L + +S D W G EM T
Sbjct: 180 VPFAWCAPES-LKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 15/160 (9%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTP---VPVPP 73
P L+E V+K+L+H +++L+ V+ + +++V E++ + L DFL+ + +P
Sbjct: 48 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ 106
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT- 132
+ + Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT
Sbjct: 107 LVDMAA--QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTA 162
Query: 133 ---HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ W P L G ++ D+WS G + +E++
Sbjct: 163 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELT 200
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT +
Sbjct: 113 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPI 170
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL----FAGDSEIDQLFRIFR 280
W P L G ++ D+WS G + +E+ TK + +DQ+ R +R
Sbjct: 171 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 224
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQT--------------T 67
RE +L L+H +++R V L +VFE++R DL FL++
Sbjct: 63 REAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVA 122
Query: 68 PVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-AFTI 126
P P+ + Q+ + Y +HRDL +N L+ + +K+ DFG+SR ++
Sbjct: 123 PGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 182
Query: 127 PMNRYTHE-VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
R ++ + + PPE +L K ++T D+WS G + E+
Sbjct: 183 DYYRVGGRTMLPIRWMPPESILYRK-FTTESDVWSFGVVLWEI 224
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-AFTIPMNRYTHE-VVTLW 230
Q+ + Y +HRDL +N L+ + +K+ DFG+SR ++ R ++ +
Sbjct: 137 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PPE +L K ++T D+WS G + E+ T
Sbjct: 197 WMPPESILYRK-FTTESDVWSFGVVLWEIFT 226
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 15/160 (9%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTP---VPVPP 73
P L+E V+K+L+H +++L+ V+ + +++V E++ + L DFL+ + +P
Sbjct: 46 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ 104
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT- 132
+ + Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT
Sbjct: 105 LVDMAA--QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTA 160
Query: 133 ---HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ W P L G ++ D+WS G + +E++
Sbjct: 161 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELT 198
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT +
Sbjct: 111 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPI 168
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL----FAGDSEIDQLFRIFR 280
W P L G ++ D+WS G + +E+ TK + +DQ+ R +R
Sbjct: 169 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 222
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 15/160 (9%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTP---VPVPP 73
P L+E V+K+L+H +++L+ V+ + +++V E++ + L DFL+ + +P
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ 115
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT- 132
+ + Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT
Sbjct: 116 LVDMAA--QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTA 171
Query: 133 ---HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ W P L G ++ D+WS G + +E++
Sbjct: 172 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELT 209
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPI 179
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL----FAGDSEIDQLFRIFR 280
W P L G ++ D+WS G + +E+ TK + +DQ+ R +R
Sbjct: 180 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 19/162 (11%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTT-----PVPV 71
P L+E V+K+L+H +++L+ V+ + +++V E++ + L DFL+ +P
Sbjct: 224 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ 282
Query: 72 PPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRY 131
+A Q+ + Y +HRDL+ NIL+ ++ K+ADFGL R I N Y
Sbjct: 283 LVDMAA----QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGR--LIEDNEY 336
Query: 132 THEVVT----LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
T W P L G ++ D+WS G + +E++
Sbjct: 337 TARQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELT 376
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---- 228
Q+ + Y +HRDL+ NIL+ ++ K+ADFGL R I N YT
Sbjct: 289 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGR--LIEDNEYTARQGAKFPI 346
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL----FAGDSEIDQLFRIFR 280
W P L G ++ D+WS G + +E+ TK + +DQ+ R +R
Sbjct: 347 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 400
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQT--------------T 67
RE +L L+H +++R V L +VFE++R DL FL++
Sbjct: 69 REAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVA 128
Query: 68 PVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-AFTI 126
P P+ + Q+ + Y +HRDL +N L+ + +K+ DFG+SR ++
Sbjct: 129 PGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 188
Query: 127 PMNRYTHE-VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
R ++ + + PPE +L K ++T D+WS G + E+
Sbjct: 189 DYYRVGGRTMLPIRWMPPESILYRK-FTTESDVWSFGVVLWEI 230
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-AFTIPMNRYTHE-VVTLW 230
Q+ + Y +HRDL +N L+ + +K+ DFG+SR ++ R ++ +
Sbjct: 143 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PPE +L K ++T D+WS G + E+ T
Sbjct: 203 WMPPESILYRK-FTTESDVWSFGVVLWEIFT 232
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 20/158 (12%)
Query: 22 LREISVLKELKHPNVIRLHDVI---PVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPP 73
+RE++ + L H N+IRL+ V+ P+ L + + LR+ FL T
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT------ 112
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT- 132
Y Q+ E + Y S+R IHRDL +N+L+ +K+ DFGL RA + Y
Sbjct: 113 --LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 170
Query: 133 --HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
H V + PE L + +S D W G EM
Sbjct: 171 QEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEM 207
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT---HEV 226
Y Q+ E + Y S+R IHRDL +N+L+ +K+ DFGL RA + Y H
Sbjct: 116 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 227 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V + PE L + +S D W G EM T
Sbjct: 176 VPFAWCAPES-LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 15/160 (9%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTP---VPVPP 73
P L+E V+K+L+H +++L+ V+ + +++V E++ + L DFL+ + +P
Sbjct: 54 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQ 112
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT- 132
+ S Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N +T
Sbjct: 113 LVDMSA--QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEWTA 168
Query: 133 ---HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ W P L G ++ D+WS G + +E++
Sbjct: 169 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELT 206
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N +T +
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEWTARQGAKFPI 176
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL----FAGDSEIDQLFRIFR 280
W P L G ++ D+WS G + +E+ TK + +DQ+ R +R
Sbjct: 177 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 230
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E S++ + HPNVI L V+ + ++ EF+ L FL+ L
Sbjct: 56 LSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML 115
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTH------E 134
+ ++Y +HR L +NIL+N + K++DFGLSR + T+ +
Sbjct: 116 RGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGK 175
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
+ W P I + +++ D+WS G + E MSY
Sbjct: 176 IPIRWTAPEAIQY--RKFTSASDVWSYGIVMWEVMSY 210
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTH--- 224
+ L + ++Y +HR L +NIL+N + K++DFGLSR + T+
Sbjct: 112 VGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 171
Query: 225 ---EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E+++
Sbjct: 172 LGGKIPIRWTAPEAIQY--RKFTSASDVWSYGIVMWEVMS 209
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 14/156 (8%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYL 80
L E +L+ + P +++L + L++V E++ ++ L+ P A+ Y
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYA 147
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R L
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCG 200
Query: 141 RP----PEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
P PEI+L +K Y+ VD W+ G + EM+ Y
Sbjct: 201 TPEALAPEIIL-SKGYNKAVDWWALGVLIYEMAAGY 235
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q++ Y HS +I+RDLKP+N+LI++ G +++ DFG ++ R L
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXL 198
Query: 230 WYRP----PEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEI 272
P PEI+L +K Y+ VD W+ G + EM F D I
Sbjct: 199 CGTPEALAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 17/158 (10%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYLY 81
+E + LKHPN+I L V + L LV EF R L L +PP + ++
Sbjct: 55 QEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK--RIPPDILVNWAV 112
Query: 82 QLLEALRYCHSRR---IIHRDLKPQNILINK--------SGALKLADFGLSRAFTIPMNR 130
Q+ + Y H IIHRDLK NILI + + LK+ DFGL+R + +
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH-RTTK 171
Query: 131 YTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ W P ++ A ++S D+WS G + E+
Sbjct: 172 MSAAGAYAWMAPE--VIRASMFSKGSDVWSYGVLLWEL 207
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 168 MSYLYQLLEALRYCHSRRI---IHRDLKPQNILINK--------SGALKLADFGLSRAFT 216
+++ Q+ + Y H I IHRDLK NILI + + LK+ DFGL+R +
Sbjct: 108 VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH 167
Query: 217 IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAG 268
+ + W P ++ A ++S D+WS G + E++T + F G
Sbjct: 168 -RTTKMSAAGAYAWMAPE--VIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
+RE ++ +L +P ++RL V + L LV E L FL +P + L
Sbjct: 384 MREAQIMHQLDNPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELL 442
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+Q+ ++Y + +HR+L +N+L+ K++DFGLS+A + YT W
Sbjct: 443 HQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP 502
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGC-IFSEMSY 170
+ PE + + +S+ D+WS G ++ +SY
Sbjct: 503 LKWYAPEC-INFRKFSSRSDVWSYGVTMWEALSY 535
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
L+Q+ ++Y + +HR+L +N+L+ K++DFGLS+A + YT W
Sbjct: 442 LHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 501
Query: 231 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE + + +S+ D+WS G E ++
Sbjct: 502 PLKWYAPEC-INFRKFSSRSDVWSYGVTMWEALS 534
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 15/160 (9%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTP---VPVPP 73
P L+E V+K+L+H +++L+ V+ + +++V E++ + L DFL+ + +P
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQ 115
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT- 132
+ + Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT
Sbjct: 116 LVDMAA--QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTA 171
Query: 133 ---HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ W P L G ++ D+WS G + +E++
Sbjct: 172 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELT 209
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPI 179
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL----FAGDSEIDQLFRIFR 280
W P L G ++ D+WS G + +E+ TK + +DQ+ R +R
Sbjct: 180 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 24 EISVLKELKH-PNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPV-PVPPALAKS-- 78
E+ VL +L H PN+I L L+L E+ +L DFL+ + V PA A +
Sbjct: 75 ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 134
Query: 79 ------------YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI 126
+ + + Y ++ IHRDL +NIL+ ++ K+ADFGLSR +
Sbjct: 135 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV 194
Query: 127 PMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ + + W L VY+T D+WS G + E+
Sbjct: 195 YVKKTMGRLPVRWMAIES--LNYSVYTTNSDVWSYGVLLWEI 234
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 177 ALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEI 236
+ Y ++ IHRDL +NIL+ ++ K+ADFGLSR + + + + W
Sbjct: 154 GMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES- 212
Query: 237 LLGAKVYSTTVDIWSAGCIFSEMIT 261
L VY+T D+WS G + E+++
Sbjct: 213 -LNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQL 83
E+ L P ++ L+ + + + E L L +P A YL Q
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQA 175
Query: 84 LEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
LE L Y HSRRI+H D+K N+L++ G+ L DFG A + + +++T Y P
Sbjct: 176 LEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFG--HAVCLQPDGLGKDLLTGDYIP 233
Query: 143 -------PEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRYCH 182
PE++LG + VD+WS+ C+ +L L CH
Sbjct: 234 GTETHMAPEVVLG-RSCDAKVDVWSSCCM---------MLHMLNGCH 270
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 13/110 (11%)
Query: 162 GCIFSEMS--YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIP 218
GC+ + + YL Q LE L Y HSRRI+H D+K N+L++ G+ L DFG A +
Sbjct: 161 GCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFG--HAVCLQ 218
Query: 219 MNRYTHEVVTLWYRP-------PEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ +++T Y P PE++LG + VD+WS+ C+ M+
Sbjct: 219 PDGLGKDLLTGDYIPGTETHMAPEVVLG-RSCDAKVDVWSSCCMMLHMLN 267
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 3/138 (2%)
Query: 32 KHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCH 91
+HP +RL L+L E L+ + +P A YL L AL + H
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH 174
Query: 92 SRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKV 151
S+ ++H D+KP NI + G KL DFGL E Y PE+L G+
Sbjct: 175 SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR-YMAPELLQGS-- 231
Query: 152 YSTTVDIWSAGCIFSEMS 169
Y T D++S G E++
Sbjct: 232 YGTAADVFSLGLTILEVA 249
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Query: 156 VDIWSAGCIFSEM-SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRA 214
+ W A +++ YL L AL + HS+ ++H D+KP NI + G KL DFGL
Sbjct: 147 CEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVE 206
Query: 215 FTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQ 274
E Y PE+L G+ Y T D++S G E+ L G Q
Sbjct: 207 LGTAGAGEVQEGDPR-YMAPELLQGS--YGTAADVFSLGLTILEVACNMELPHGGEGWQQ 263
Query: 275 L 275
L
Sbjct: 264 L 264
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL-EALRYCHSRRIIHRDLKPQNILINK-- 200
E L G +++S D E S + + + EA++Y HS I HRD+KP+N+L
Sbjct: 93 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 152
Query: 201 -SGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 259
+ LKL DFG ++ T N T T +Y PE+ LG + Y + D+WS G I +
Sbjct: 153 PNAILKLTDFGFAKE-TTSHNSLTEPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYIL 210
Query: 260 ITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVS---KLPIYKTDFPEWRPKKFSEILN 316
+ F + + + PG+ ++ Y+ PEW + SE +
Sbjct: 211 LCGYPPFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEW--SEVSEEVK 253
Query: 317 LPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQVEMVKPT 358
+ + ++ +P QR++ + H + Q V T
Sbjct: 254 M-------LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 288
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINK---SGALKLADFGLSRAFTIPMNRYT 132
A + + EA++Y HS I HRD+KP+N+L + LKL DFG ++ T N T
Sbjct: 117 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLT 175
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
T +Y PE+ LG + Y + D+WS G I
Sbjct: 176 EPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIM 207
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 24 EISVLKELKH-PNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPV-PVPPALAKS-- 78
E+ VL +L H PN+I L L+L E+ +L DFL+ + V PA A +
Sbjct: 65 ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 124
Query: 79 ------------YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI 126
+ + + Y ++ IHRDL +NIL+ ++ K+ADFGLSR +
Sbjct: 125 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV 184
Query: 127 PMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ + + W L VY+T D+WS G + E+
Sbjct: 185 YVKKTMGRLPVRWMAIES--LNYSVYTTNSDVWSYGVLLWEI 224
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 177 ALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEI 236
+ Y ++ IHRDL +NIL+ ++ K+ADFGLSR + + + + W
Sbjct: 144 GMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES- 202
Query: 237 LLGAKVYSTTVDIWSAGCIFSEMIT 261
L VY+T D+WS G + E+++
Sbjct: 203 -LNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 83/160 (51%), Gaps = 15/160 (9%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTP---VPVPP 73
P L+E V+K+++H +++L+ V+ + +++V E++ + L DFL+ + +P
Sbjct: 57 PEAFLQEAQVMKKIRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ 115
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT- 132
+ + Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT
Sbjct: 116 LVDMAA--QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTA 171
Query: 133 ---HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ W P L G ++ D+WS G + +E++
Sbjct: 172 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELT 209
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R I N YT +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPI 179
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL----FAGDSEIDQLFRIFR 280
W P L G ++ D+WS G + +E+ TK + +DQ+ R +R
Sbjct: 180 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 82/160 (51%), Gaps = 15/160 (9%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTP---VPVPP 73
P L+E V+K+L+H +++L+ V+ + +++V E++ + L DFL+ + +P
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ 115
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT- 132
+ + Q+ + Y +HRDL NIL+ ++ K+ADFGL+R I N YT
Sbjct: 116 LVDMAA--QIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLAR--LIEDNEYTA 171
Query: 133 ---HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ W P L G ++ D+WS G + +E++
Sbjct: 172 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELT 209
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 12/116 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYT----HEVVT 228
Q+ + Y +HRDL NIL+ ++ K+ADFGL+R I N YT +
Sbjct: 122 QIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPI 179
Query: 229 LWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL----FAGDSEIDQLFRIFR 280
W P L G ++ D+WS G + +E+ TK + +DQ+ R +R
Sbjct: 180 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL-EALRYCHSRRIIHRDLKPQNILINK-- 200
E L G +++S D E S + + + EA++Y HS I HRD+KP+N+L
Sbjct: 139 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 198
Query: 201 -SGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 256
+ LKL DFG ++ T N T T +Y PE+ LG + Y + D+WS G I
Sbjct: 199 PNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIM 253
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINK---SGALKLADFGLSRAFTIPMNRYT 132
A + + EA++Y HS I HRD+KP+N+L + LKL DFG ++ T N T
Sbjct: 163 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLT 221
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
T +Y PE+ LG + Y + D+WS G I
Sbjct: 222 TPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIM 253
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL-EALRYCHSRRIIHRDLKPQNILINK-- 200
E L G +++S D E S + + + EA++Y HS I HRD+KP+N+L
Sbjct: 101 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 160
Query: 201 -SGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 259
+ LKL DFG ++ T N T T +Y PE+ LG + Y + D+WS G I +
Sbjct: 161 PNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYIL 218
Query: 260 ITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVS---KLPIYKTDFPEWRPKKFSEILN 316
+ F + + + PG+ ++ Y+ PEW + SE +
Sbjct: 219 LCGYPPFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEW--SEVSEEVK 261
Query: 317 LPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQVEMVKPT 358
+ + ++ +P QR++ + H + Q V T
Sbjct: 262 M-------LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 296
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINK---SGALKLADFGLSRAFTIPMNRYT 132
A + + EA++Y HS I HRD+KP+N+L + LKL DFG ++ T N T
Sbjct: 125 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLT 183
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
T +Y PE+ LG + Y + D+WS G I
Sbjct: 184 TPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIM 215
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
L E ++ + H N+IRL VI + ++ E++ L FL+ L
Sbjct: 94 LGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGML 153
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNRYT---HEVV 136
+ ++Y + +HRDL +NIL+N + K++DFGLSR P YT ++
Sbjct: 154 RGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIP 213
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSE-MSY 170
W P I + +++ D+WS G + E M+Y
Sbjct: 214 IRWTAPEAI--SYRKFTSASDVWSFGIVMWEVMTY 246
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT-IPMNRYT--- 223
+ L + ++Y + +HRDL +NIL+N + K++DFGLSR P YT
Sbjct: 150 VGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSG 209
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
++ W P I + +++ D+WS G + E++T
Sbjct: 210 GKIPIRWTAPEAI--SYRKFTSASDVWSFGIVMWEVMT 245
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL-EALRYCHSRRIIHRDLKPQNILINK-- 200
E L G +++S D E S + + + EA++Y HS I HRD+KP+N+L
Sbjct: 145 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 204
Query: 201 -SGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 256
+ LKL DFG ++ T N T T +Y PE+ LG + Y + D+WS G I
Sbjct: 205 PNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIM 259
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINK---SGALKLADFGLSRAFTIPMNRYT 132
A + + EA++Y HS I HRD+KP+N+L + LKL DFG ++ T N T
Sbjct: 169 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLT 227
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
T +Y PE+ LG + Y + D+WS G I
Sbjct: 228 TPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIM 259
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL-EALRYCHSRRIIHRDLKPQNILINK-- 200
E L G +++S D E S + + + EA++Y HS I HRD+KP+N+L
Sbjct: 100 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 159
Query: 201 -SGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 259
+ LKL DFG ++ T N T T +Y PE+ LG + Y + D+WS G I +
Sbjct: 160 PNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYIL 217
Query: 260 ITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVS---KLPIYKTDFPEWRPKKFSEILN 316
+ F + + + PG+ ++ Y+ PEW + SE +
Sbjct: 218 LCGYPPFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEW--SEVSEEVK 260
Query: 317 LPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQVEMVKPT 358
+ + ++ +P QR++ + H + Q V T
Sbjct: 261 M-------LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 295
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINK---SGALKLADFGLSRAFTIPMNRYT 132
A + + EA++Y HS I HRD+KP+N+L + LKL DFG ++ T N T
Sbjct: 124 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLT 182
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
T +Y PE+ LG + Y + D+WS G I
Sbjct: 183 TPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIM 214
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL-EALRYCHSRRIIHRDLKPQNILINK-- 200
E L G +++S D E S + + + EA++Y HS I HRD+KP+N+L
Sbjct: 95 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 154
Query: 201 -SGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 256
+ LKL DFG ++ T N T T +Y PE+ LG + Y + D+WS G I
Sbjct: 155 PNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIM 209
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINK---SGALKLADFGLSRAFTIPMNRYT 132
A + + EA++Y HS I HRD+KP+N+L + LKL DFG ++ T N T
Sbjct: 119 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLT 177
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
T +Y PE+ LG + Y + D+WS G I
Sbjct: 178 TPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIM 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 24/160 (15%)
Query: 22 LREISVLKELKHPNVIRLHDVI---PVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPP 73
+RE++ + L H N+IRL+ V+ P+ L + + LR+ FL T
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT------ 122
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN---- 129
Y Q+ E + Y S+R IHRDL +N+L+ +K+ DFGL RA +P N
Sbjct: 123 --LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA--LPQNDDHX 178
Query: 130 -RYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
H V + PE L + +S D W G EM
Sbjct: 179 VMQEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEM 217
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN-----RYTH 224
Y Q+ E + Y S+R IHRDL +N+L+ +K+ DFGL RA +P N H
Sbjct: 126 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA--LPQNDDHXVMQEH 183
Query: 225 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V + PE L + +S D W G EM T
Sbjct: 184 RKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL-EALRYCHSRRIIHRDLKPQNILINK-- 200
E L G +++S D E S + + + EA++Y HS I HRD+KP+N+L
Sbjct: 99 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 158
Query: 201 -SGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 259
+ LKL DFG ++ T N T T +Y PE+ LG + Y + D+WS G I +
Sbjct: 159 PNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYIL 216
Query: 260 ITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVS---KLPIYKTDFPEWRPKKFSEILN 316
+ F + + + PG+ ++ Y+ PEW + SE +
Sbjct: 217 LCGYPPFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEW--SEVSEEVK 259
Query: 317 LPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQVEMVKPT 358
+ + ++ +P QR++ + H + Q V T
Sbjct: 260 M-------LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 294
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINK---SGALKLADFGLSRAFTIPMNRYT 132
A + + EA++Y HS I HRD+KP+N+L + LKL DFG ++ T N T
Sbjct: 123 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLT 181
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
T +Y PE+ LG + Y + D+WS G I
Sbjct: 182 TPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIM 213
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 5 ESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL 56
+ +RV V+ V +A L E SV+K +V+RL V+ +V E +
Sbjct: 40 KGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELM 99
Query: 57 RQ-DLKDFL-------QTTPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQNIL 106
DLK +L + P PP L + ++ + + Y ++++ +HRDL +N +
Sbjct: 100 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCM 159
Query: 107 INKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ +K+ DFG++R T + ++ + + PE L V++T+ D+WS G +
Sbjct: 160 VAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDG-VFTTSSDMWSFGVV 218
Query: 165 FSEMSYLYQ 173
E++ L +
Sbjct: 219 LWEITSLAE 227
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++++ +HRDL +N ++ +K+ DFG++R T + ++ +
Sbjct: 135 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T+ D+WS G + E+ +
Sbjct: 195 WMAPESLKDG-VFTTSSDMWSFGVVLWEITS 224
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 20/167 (11%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQL 83
E+ L P ++ L+ + + + E L L +P A YL Q
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQA 194
Query: 84 LEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
LE L Y HSRRI+H D+K N+L++ G+ L DFG A + + ++T Y P
Sbjct: 195 LEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFG--HAVCLQPDGLGKSLLTGDYIP 252
Query: 143 -------PEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRYCH 182
PE++LG + VD+WS+ C+ +L L CH
Sbjct: 253 GTETHMAPEVVLG-RSCDAKVDVWSSCCM---------MLHMLNGCH 289
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 13/110 (11%)
Query: 162 GCIFSEMS--YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIP 218
GC+ + + YL Q LE L Y HSRRI+H D+K N+L++ G+ L DFG A +
Sbjct: 180 GCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFG--HAVCLQ 237
Query: 219 MNRYTHEVVTLWYRP-------PEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ ++T Y P PE++LG + VD+WS+ C+ M+
Sbjct: 238 PDGLGKSLLTGDYIPGTETHMAPEVVLG-RSCDAKVDVWSSCCMMLHMLN 286
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL-EALRYCHSRRIIHRDLKPQNILINK-- 200
E L G +++S D E S + + + EA++Y HS I HRD+KP+N+L
Sbjct: 95 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 154
Query: 201 -SGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 256
+ LKL DFG ++ T N T T +Y PE+ LG + Y + D+WS G I
Sbjct: 155 PNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIM 209
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINK---SGALKLADFGLSRAFTIPMNRYT 132
A + + EA++Y HS I HRD+KP+N+L + LKL DFG ++ T N T
Sbjct: 119 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLT 177
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
T +Y PE+ LG + Y + D+WS G I
Sbjct: 178 TPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIM 209
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 24/160 (15%)
Query: 22 LREISVLKELKHPNVIRLHDVI---PVDF-----KLFLVFEFLRQDLKDFLQTTPVPVPP 73
+RE++ + L H N+IRL+ V+ P+ L + + LR+ FL T
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT------ 112
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN---- 129
Y Q+ E + Y S+R IHRDL +N+L+ +K+ DFGL RA +P N
Sbjct: 113 --LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA--LPQNDDHX 168
Query: 130 -RYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
H V + PE L + +S D W G EM
Sbjct: 169 VMQEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEM 207
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN-----RYTH 224
Y Q+ E + Y S+R IHRDL +N+L+ +K+ DFGL RA +P N H
Sbjct: 116 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA--LPQNDDHXVMQEH 173
Query: 225 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V + PE L + +S D W G EM T
Sbjct: 174 RKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 5 ESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL 56
+ +RV V+ V +A L E SV+K +V+RL V+ +V E +
Sbjct: 43 KGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELM 102
Query: 57 RQ-DLKDFL-------QTTPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQNIL 106
DLK +L + P PP L + ++ + + Y ++++ +HRDL +N +
Sbjct: 103 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCM 162
Query: 107 INKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ +K+ DFG++R T + ++ + + PE L V++T+ D+WS G +
Sbjct: 163 VAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDG-VFTTSSDMWSFGVV 221
Query: 165 FSEMSYLYQ 173
E++ L +
Sbjct: 222 LWEITSLAE 230
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++++ +HRDL +N ++ +K+ DFG++R T + ++ +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T+ D+WS G + E+ +
Sbjct: 198 WMAPESLKDG-VFTTSSDMWSFGVVLWEITS 227
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL-EALRYCHSRRIIHRDLKPQNILINK-- 200
E L G +++S D E S + + + EA++Y HS I HRD+KP+N+L
Sbjct: 93 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 152
Query: 201 -SGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 259
+ LKL DFG ++ T N T T +Y PE+ LG + Y + D+WS G I +
Sbjct: 153 PNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYIL 210
Query: 260 ITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVS---KLPIYKTDFPEWRPKKFSEILN 316
+ F + + + PG+ ++ Y+ PEW + SE +
Sbjct: 211 LCGYPPFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEW--SEVSEEVK 253
Query: 317 LPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQVEMVKPT 358
+ + ++ +P QR++ + H + Q V T
Sbjct: 254 M-------LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 288
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINK---SGALKLADFGLSRAFTIPMNRYT 132
A + + EA++Y HS I HRD+KP+N+L + LKL DFG ++ T N T
Sbjct: 117 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLT 175
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
T +Y PE+ LG + Y + D+WS G I
Sbjct: 176 TPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIM 207
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL-EALRYCHSRRIIHRDLKPQNILINK-- 200
E L G +++S D E S + + + EA++Y HS I HRD+KP+N+L
Sbjct: 109 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 168
Query: 201 -SGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 259
+ LKL DFG ++ T N T T +Y PE+ LG + Y + D+WS G I +
Sbjct: 169 PNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYIL 226
Query: 260 ITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGVS---KLPIYKTDFPEWRPKKFSEILN 316
+ F + + + PG+ ++ Y+ PEW + SE +
Sbjct: 227 LCGYPPFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEW--SEVSEEVK 269
Query: 317 LPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFNQVEMVKPT 358
+ + ++ +P QR++ + H + Q V T
Sbjct: 270 M-------LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 304
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINK---SGALKLADFGLSRAFTIPMNRYT 132
A + + EA++Y HS I HRD+KP+N+L + LKL DFG ++ T N T
Sbjct: 133 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLT 191
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
T +Y PE+ LG + Y + D+WS G I
Sbjct: 192 TPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIM 223
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y ++ L + H R II+RDLK N++++ G +K+ADFG+ + + T
Sbjct: 125 YAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTP 184
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFR 277
Y PEI + + Y +VD W+ G + EM+ + F G+ E D+LF+
Sbjct: 185 DYIAPEI-IAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-DELFQ 230
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Query: 32 KHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLEALRYC 90
K P + +LH +L+ V E++ DL +Q P A Y ++ L +
Sbjct: 78 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQ-AVFYAAEISIGLFFL 136
Query: 91 HSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAK 150
H R II+RDLK N++++ G +K+ADFG+ + + T Y PEI + +
Sbjct: 137 HKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEI-IAYQ 195
Query: 151 VYSTTVDIWSAGCIFSEM 168
Y +VD W+ G + EM
Sbjct: 196 PYGKSVDWWAYGVLLYEM 213
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL-EALRYCHSRRIIHRDLKPQNILINK-- 200
E L G +++S D E S + + + EA++Y HS I HRD+KP+N+L
Sbjct: 94 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 153
Query: 201 -SGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 256
+ LKL DFG ++ T N T T +Y PE+ LG + Y + D+WS G I
Sbjct: 154 PNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIM 208
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILINK---SGALKLADFGLSRAFTIPMNRYT 132
A + + EA++Y HS I HRD+KP+N+L + LKL DFG ++ T N T
Sbjct: 118 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLT 176
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIF 165
T +Y PE+ LG + Y + D+WS G I
Sbjct: 177 TPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIM 208
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 5 ESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL 56
+ +RV V+ V +A L E SV+K +V+RL V+ +V E +
Sbjct: 43 KGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELM 102
Query: 57 RQ-DLKDFL-------QTTPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQNIL 106
DLK +L + P PP L + ++ + + Y ++++ +HRDL +N +
Sbjct: 103 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCM 162
Query: 107 INKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ +K+ DFG++R T + ++ + + PE L V++T+ D+WS G +
Sbjct: 163 VAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDG-VFTTSSDMWSFGVV 221
Query: 165 FSEMSYLYQ 173
E++ L +
Sbjct: 222 LWEITSLAE 230
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++++ +HRDL +N ++ +K+ DFG++R T + ++ +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T+ D+WS G + E+ +
Sbjct: 198 WMAPESLKDG-VFTTSSDMWSFGVVLWEITS 227
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTP---VPVPP 73
P L+E V+K+L+H +++L+ V+ + +++V E++ + L DFL+ + +P
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQ 115
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRY 131
+ + Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R R
Sbjct: 116 LVDMAA--QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ 173
Query: 132 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ W P L G ++ D+WS G + +E++
Sbjct: 174 GAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELT 209
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R R + W
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW 181
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL----FAGDSEIDQLFRIFR 280
P L G ++ D+WS G + +E+ TK + +DQ+ R +R
Sbjct: 182 TAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 20/169 (11%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
+ E+ L P ++ L+ + + + E L L +P A YL
Sbjct: 112 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG 171
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q LE L Y H+RRI+H D+K N+L++ G+ L DFG A + + ++T Y
Sbjct: 172 QALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFG--HALCLQPDGLGKSLLTGDY 229
Query: 141 RP-------PEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRYCH 182
P PE+++G K VDIWS+ C+ +L L CH
Sbjct: 230 IPGTETHMAPEVVMG-KPCDAKVDIWSSCCM---------MLHMLNGCH 268
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 13/110 (11%)
Query: 162 GCIFSEMS--YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIP 218
GC+ + + YL Q LE L Y H+RRI+H D+K N+L++ G+ L DFG A +
Sbjct: 159 GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFG--HALCLQ 216
Query: 219 MNRYTHEVVTLWYRP-------PEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ ++T Y P PE+++G K VDIWS+ C+ M+
Sbjct: 217 PDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCDAKVDIWSSCCMMLHMLN 265
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 20/169 (11%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
+ E+ L P ++ L+ + + + E L L +P A YL
Sbjct: 98 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG 157
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q LE L Y H+RRI+H D+K N+L++ G+ L DFG A + + ++T Y
Sbjct: 158 QALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFG--HALCLQPDGLGKSLLTGDY 215
Query: 141 RP-------PEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRYCH 182
P PE+++G K VDIWS+ C+ +L L CH
Sbjct: 216 IPGTETHMAPEVVMG-KPCDAKVDIWSSCCM---------MLHMLNGCH 254
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 13/110 (11%)
Query: 162 GCIFSEMS--YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIP 218
GC+ + + YL Q LE L Y H+RRI+H D+K N+L++ G+ L DFG A +
Sbjct: 145 GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFG--HALCLQ 202
Query: 219 MNRYTHEVVTLWYRP-------PEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ ++T Y P PE+++G K VDIWS+ C+ M+
Sbjct: 203 PDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCDAKVDIWSSCCMMLHMLN 251
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 33/200 (16%)
Query: 174 LLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
+++AL + HS+ +IHRD+KP N+LIN G +K+ DFG+S + + T + Y
Sbjct: 162 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS-GYLVDSVAKTIDAGCKPYM 220
Query: 233 PPEIL---LGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI-FRTLGTPHED 288
PE + L K YS DIWS G E+ + R + + GTP +
Sbjct: 221 APERINPELNQKGYSVKSDIWSLGITMIEL--------------AILRFPYDSWGTPFQQ 266
Query: 289 VWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEY 348
+ + + P+ KFS VD S+ + + K+R + ++QH +
Sbjct: 267 LK------QVVEEPSPQLPADKFSAEF-------VDFTSQCLKKNSKERPTYPELMQHPF 313
Query: 349 FNQVEMVKPTLAVFPELGYG 368
F E +A F +L G
Sbjct: 314 FTLHESKGTDVASFVKLILG 333
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 71 VPPALAKSYLYQLLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN 129
+P + +++AL + HS+ +IHRD+KP N+LIN G +K+ DFG+S + +
Sbjct: 150 IPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS-GYLVDSV 208
Query: 130 RYTHEVVTLWYRPPEIL---LGAKVYSTTVDIWSAGCIFSEMSYL 171
T + Y PE + L K YS DIWS G E++ L
Sbjct: 209 AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAIL 253
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 20/169 (11%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
+ E+ L P ++ L+ + + + E L L +P A YL
Sbjct: 114 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG 173
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPMNRYTHEVVTLWY 140
Q LE L Y H+RRI+H D+K N+L++ G+ L DFG A + + ++T Y
Sbjct: 174 QALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFG--HALCLQPDGLGKSLLTGDY 231
Query: 141 RP-------PEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRYCH 182
P PE+++G K VDIWS+ C+ +L L CH
Sbjct: 232 IPGTETHMAPEVVMG-KPCDAKVDIWSSCCM---------MLHMLNGCH 270
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 13/110 (11%)
Query: 162 GCIFSEMS--YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIP 218
GC+ + + YL Q LE L Y H+RRI+H D+K N+L++ G+ L DFG A +
Sbjct: 161 GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFG--HALCLQ 218
Query: 219 MNRYTHEVVTLWYRP-------PEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ ++T Y P PE+++G K VDIWS+ C+ M+
Sbjct: 219 PDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCDAKVDIWSSCCMMLHMLN 267
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Query: 164 IFSEMS---YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN 220
+FSE Y +++ L + H+R +++RDLKP NIL+++ G ++++D GL+ F+
Sbjct: 287 VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS--KK 344
Query: 221 RYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLF 266
+ V T Y PE+L Y ++ D +S GC+ +++ + F
Sbjct: 345 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
Y +++ L + H+R +++RDLKP NIL+++ G ++++D GL+ F+ + V T
Sbjct: 296 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS--KKKPHASVGTH 353
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIF 165
Y PE+L Y ++ D +S GC+
Sbjct: 354 GYMAPEVLQKGVAYDSSADWFSLGCML 380
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Query: 164 IFSEMS---YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN 220
+FSE Y +++ L + H+R +++RDLKP NIL+++ G ++++D GL+ F+
Sbjct: 288 VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS--KK 345
Query: 221 RYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLF 266
+ V T Y PE+L Y ++ D +S GC+ +++ + F
Sbjct: 346 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
Y +++ L + H+R +++RDLKP NIL+++ G ++++D GL+ F+ + V T
Sbjct: 297 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS--KKKPHASVGTH 354
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIF 165
Y PE+L Y ++ D +S GC+
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCML 381
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Query: 164 IFSEMS---YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN 220
+FSE Y +++ L + H+R +++RDLKP NIL+++ G ++++D GL+ F+
Sbjct: 288 VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS--KK 345
Query: 221 RYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLF 266
+ V T Y PE+L Y ++ D +S GC+ +++ + F
Sbjct: 346 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
Y +++ L + H+R +++RDLKP NIL+++ G ++++D GL+ F+ + V T
Sbjct: 297 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS--KKKPHASVGTH 354
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIF 165
Y PE+L Y ++ D +S GC+
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCML 381
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Query: 164 IFSEMS---YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN 220
+FSE Y +++ L + H+R +++RDLKP NIL+++ G ++++D GL+ F+
Sbjct: 288 VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS--KK 345
Query: 221 RYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLF 266
+ V T Y PE+L Y ++ D +S GC+ +++ + F
Sbjct: 346 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 138
Y +++ L + H+R +++RDLKP NIL+++ G ++++D GL+ F+ + V T
Sbjct: 297 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS--KKKPHASVGTH 354
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIF 165
Y PE+L Y ++ D +S GC+
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCML 381
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFL---QTTPVPVPP 73
P + L E ++K+LKH +++L+ V+ + +++V E++ + L DFL + + +P
Sbjct: 48 PESFLEEAQIMKKLKHDKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKDGEGRALKLPN 106
Query: 74 ALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRY 131
+ + Q+ + Y IHRDL+ NIL+ K+ADFGL+R R
Sbjct: 107 LVDMAA--QVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQ 164
Query: 132 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ W P L G ++ D+WS G + +E+
Sbjct: 165 GAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTEL 199
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
Q+ + Y IHRDL+ NIL+ K+ADFGL+R R + W
Sbjct: 113 QVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKW 172
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITK 262
P L G ++ D+WS G + +E++TK
Sbjct: 173 TAPEAALYGR--FTIKSDVWSFGILLTELVTK 202
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 71 VPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR 130
+ LA Q+ + + Y HS+++IHRDLKP NI + + +K+ DFGL + R
Sbjct: 133 LDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 192
Query: 131 YTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T TL Y PE + ++ Y VD+++ G I +E+
Sbjct: 193 -TRSKGTLRYMSPE-QISSQDYGKEVDLYALGLILAEL 228
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
Q+ + + Y HS+++IHRDLKP NI + + +K+ DFGL + R T TL Y
Sbjct: 144 QITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR-TRSKGTLRYM 202
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMI 260
PE + ++ Y VD+++ G I +E++
Sbjct: 203 SPE-QISSQDYGKEVDLYALGLILAELL 229
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 5 ESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL 56
+ +RV V+ V +A L E SV+K +V+RL V+ +V E +
Sbjct: 43 KGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELM 102
Query: 57 RQ-DLKDFL-------QTTPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQNIL 106
DLK +L + P PP L + ++ + + Y ++++ +HRDL +N +
Sbjct: 103 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCM 162
Query: 107 INKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ +K+ DFG++R T + ++ + + PE L V++T+ D+WS G +
Sbjct: 163 VAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDG-VFTTSSDMWSFGVV 221
Query: 165 FSEMSYLYQ 173
E++ L +
Sbjct: 222 LWEITSLAE 230
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++++ +HRDL +N ++ +K+ DFG++R T + ++ +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T+ D+WS G + E+ +
Sbjct: 198 WMAPESLKDG-VFTTSSDMWSFGVVLWEITS 227
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 35/200 (17%)
Query: 167 EMSYLYQ-LLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNR- 221
E S + Q + AL + H++ I HRDLKP+NIL N+ +K+ DF L + +
Sbjct: 112 EASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS 171
Query: 222 --YTHEVVT----LWYRPPEILLG----AKVYSTTVDIWSAGCIFSEMITKKTLFAGDSE 271
T E++T Y PE++ A +Y D+WS G I +++ F G
Sbjct: 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG--- 228
Query: 272 IDQLFRIFRTLGTPHEDVWPGVSKLPIY-----KTDFPEWRPKKFSEILNLPDPLAVDVF 326
R G + P + K +FP+ K ++ I A D+
Sbjct: 229 -----RCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD---KDWAHI----SCAAKDLI 276
Query: 327 SKIMALDPKQRVSAKTILQH 346
SK++ D KQR+SA +LQH
Sbjct: 277 SKLLVRDAKQRLSAAQVLQH 296
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 15/164 (9%)
Query: 17 VPSTALREISVLKELK-HPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPAL 75
+ S RE+ +L + + H NV+ L + + + +LVFE +R
Sbjct: 53 IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELE 112
Query: 76 AKSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNR-- 130
A + + AL + H++ I HRDLKP+NIL N+ +K+ DF L + +
Sbjct: 113 ASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP 172
Query: 131 -YTHEVVT----LWYRPPEILLG----AKVYSTTVDIWSAGCIF 165
T E++T Y PE++ A +Y D+WS G I
Sbjct: 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 144 EILLGAKVYSTTVDIWSAGCIFSEMSYLYQLL-EALRYCHSRRIIHRDLKPQNILINK-- 200
E L G +++S D E S + + + EA++Y HS I HRD+KP+N+L
Sbjct: 139 ECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 198
Query: 201 -SGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 255
+ LKL DFG ++ T N T T +Y PE+ LG + Y + D WS G I
Sbjct: 199 PNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDXWSLGVI 252
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 85 EALRYCHSRRIIHRDLKPQNILINK---SGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 141
EA++Y HS I HRD+KP+N+L + LKL DFG ++ T N T T +Y
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYV 230
Query: 142 PPEILLGAKVYSTTVDIWSAGCI 164
PE+ LG + Y + D WS G I
Sbjct: 231 APEV-LGPEKYDKSCDXWSLGVI 252
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 53/103 (51%), Gaps = 13/103 (12%)
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT---------IPMNRY- 131
Q+ EA+ + HS+ ++HRDLKP NI +K+ DFGL A PM Y
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 132 TH--EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLY 172
TH +V T Y PE + G YS VDI+S G I E+ Y +
Sbjct: 232 THXGQVGTKLYMSPEQIHGNN-YSHKVDIFSLGLILFELLYSF 273
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 52/100 (52%), Gaps = 13/100 (13%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT---------IPMNRY- 222
Q+ EA+ + HS+ ++HRDLKP NI +K+ DFGL A PM Y
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 223 TH--EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMI 260
TH +V T Y PE + G YS VDI+S G I E++
Sbjct: 232 THXGQVGTKLYMSPEQIHGNN-YSHKVDIFSLGLILFELL 270
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 13/160 (8%)
Query: 23 REISVLKELKHP-NVIRLHDVI------PVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPA 74
+EI++LK+ H N+ + +D +L+LV EF + D ++ T
Sbjct: 69 QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE 128
Query: 75 LAKSYL-YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTH 133
+Y+ ++L L + H ++IHRD+K QN+L+ ++ +KL DFG+S + R
Sbjct: 129 EWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT 188
Query: 134 EVVTLWYRPPEILLGAK----VYSTTVDIWSAGCIFSEMS 169
+ T ++ PE++ + Y D+WS G EM+
Sbjct: 189 FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 228
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
++L L + H ++IHRD+K QN+L+ ++ +KL DFG+S + R + T ++
Sbjct: 137 EILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWM 196
Query: 233 PPEILLGAK----VYSTTVDIWSAGCIFSEM 259
PE++ + Y D+WS G EM
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIEM 227
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 24 EISVLKELKH-PNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFLQTTPV-PVPPALAKS-- 78
E+ VL +L H PN+I L L+L E+ +L DFL+ + V PA A +
Sbjct: 72 ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 131
Query: 79 ------------YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTI 126
+ + + Y ++ IHR+L +NIL+ ++ K+ADFGLSR +
Sbjct: 132 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEV 191
Query: 127 PMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ + + W L VY+T D+WS G + E+
Sbjct: 192 YVKKTMGRLPVRWMAIES--LNYSVYTTNSDVWSYGVLLWEI 231
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 177 ALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEI 236
+ Y ++ IHR+L +NIL+ ++ K+ADFGLSR + + + + W
Sbjct: 151 GMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES- 209
Query: 237 LLGAKVYSTTVDIWSAGCIFSEMIT 261
L VY+T D+WS G + E+++
Sbjct: 210 -LNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 18 PSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL-RQDLKDFL--QTTPVPVPPA 74
P L+E V+K+L+H +++L+ V+ + + +V E++ + L DFL +T P
Sbjct: 47 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIXIVTEYMSKGSLLDFLKGETGKYLRLPQ 105
Query: 75 LAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYT 132
L Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R R
Sbjct: 106 LV-DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQG 164
Query: 133 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ W P L G ++ D+WS G + +E++
Sbjct: 165 AKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELT 199
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
Q+ + Y +HRDL+ NIL+ ++ K+ADFGL+R R + W
Sbjct: 112 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW 171
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL----FAGDSEIDQLFRIFR 280
P L G ++ D+WS G + +E+ TK + +DQ+ R +R
Sbjct: 172 TAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 223
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 5 ESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL 56
+ +RV V+ V +A L E SV+K +V+RL V+ +V E +
Sbjct: 42 KGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELM 101
Query: 57 RQ-DLKDFL-------QTTPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQNIL 106
DLK +L + P PP L + ++ + + Y ++++ +HRDL +N +
Sbjct: 102 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCM 161
Query: 107 INKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ +K+ DFG++R T + ++ + + PE L V++T+ D+WS G +
Sbjct: 162 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG-VFTTSSDMWSFGVV 220
Query: 165 FSEMSYLYQ 173
E++ L +
Sbjct: 221 LWEITSLAE 229
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++++ +HRDL +N ++ +K+ DFG++R T + ++ +
Sbjct: 137 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T+ D+WS G + E+ +
Sbjct: 197 WMAPESLKDG-VFTTSSDMWSFGVVLWEITS 226
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 24 EISVLKELKHPNVIRLHDVIPVDFK----LFLVFEFLRQD-LKDFLQTTPVPVPPALAKS 78
E LK L+HPN++R +D K + LV E LK +L+ V L +S
Sbjct: 75 EAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVL-RS 133
Query: 79 YLYQLLEALRYCHSRR--IIHRDLKPQNILINK-SGALKLADFGLSRAFTIPMNRYTHEV 135
+ Q+L+ L++ H+R IIHRDLK NI I +G++K+ D GL+ T+ + V
Sbjct: 134 WCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA---TLKRASFAKAV 190
Query: 136 V-TLWYRPPEILLGAKVYSTTVDIWSAG-CIFSEMSYLYQLLEALRYCHSRRIIHRDLKP 193
+ T + PE + Y +VD+++ G C + Y E R + +KP
Sbjct: 191 IGTPEFXAPEXY--EEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKP 248
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 35/187 (18%)
Query: 169 SYLYQLLEALRYCHSRR--IIHRDLKPQNILINK-SGALKLADFGLSRAFTIPMNRYTHE 225
S+ Q+L+ L++ H+R IIHRDLK NI I +G++K+ D GL+ T+ +
Sbjct: 133 SWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA---TLKRASFAKA 189
Query: 226 VV-TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGT 284
V+ T + PE + Y +VD+++ G E T + + SE +I+R
Sbjct: 190 VIGTPEFXAPEXY--EEKYDESVDVYAFGXCXLEXATSEYPY---SECQNAAQIYRR--- 241
Query: 285 PHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTIL 344
V GV K PE + ++ + + +R S K +L
Sbjct: 242 ----VTSGVKPASFDKVAIPEVK----------------EIIEGCIRQNKDERYSIKDLL 281
Query: 345 QHEYFNQ 351
H +F +
Sbjct: 282 NHAFFQE 288
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 5 ESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL 56
+ +RV V+ V +A L E SV+K +V+RL V+ +V E +
Sbjct: 43 KGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELM 102
Query: 57 RQ-DLKDFL-------QTTPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQNIL 106
DLK +L + P PP L + ++ + + Y ++++ +HRDL +N +
Sbjct: 103 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCM 162
Query: 107 INKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ +K+ DFG++R T + ++ + + PE L V++T+ D+WS G +
Sbjct: 163 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG-VFTTSSDMWSFGVV 221
Query: 165 FSEMSYLYQ 173
E++ L +
Sbjct: 222 LWEITSLAE 230
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++++ +HRDL +N ++ +K+ DFG++R T + ++ +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T+ D+WS G + E+ +
Sbjct: 198 WMAPESLKDG-VFTTSSDMWSFGVVLWEITS 227
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 19/157 (12%)
Query: 23 REISVLKELKHPNVIRLHDVI--PVDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
+EI +L+ L H ++I+ L LV E++ L+D+L + LA+
Sbjct: 82 QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSI----GLAQLL 137
Query: 80 LY--QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV- 136
L+ Q+ E + Y H++ IHRDL +N+L++ +K+ DFGL++A +P + V
Sbjct: 138 LFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA--VPEGHEXYRVRE 195
Query: 137 -----TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY PE L K Y + D+WS G E+
Sbjct: 196 DGDSPVFWY-APECLKEYKFYYAS-DVWSFGVTLYEL 230
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV----- 227
Q+ E + Y H++ IHRDL +N+L++ +K+ DFGL++A +P + V
Sbjct: 142 QICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA--VPEGHEXYRVREDGDS 199
Query: 228 -TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L K Y + D+WS G E++T
Sbjct: 200 PVFWY-APECLKEYKFYYAS-DVWSFGVTLYELLT 232
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 24/175 (13%)
Query: 23 REISVLKELKHPNVIRLHDVIP--VDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
REI +L+ L H ++++ + + LV E++ L+D+L V + L +
Sbjct: 59 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL--F 116
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV--- 136
Q+ E + Y H++ IHR L +N+L++ +K+ DFGL++A +P + V
Sbjct: 117 AQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKA--VPEGHEYYRVREDG 174
Query: 137 ---TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRYCHSRRIIH 188
WY PE L K Y + D+WS G L E L YC S + H
Sbjct: 175 DSPVFWY-APECLKECKFYYAS-DVWSFGVT---------LYELLTYCDSNQSPH 218
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV----- 227
Q+ E + Y H++ IHR L +N+L++ +K+ DFGL++A +P + V
Sbjct: 119 QICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKA--VPEGHEYYRVREDGDS 176
Query: 228 -TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L K Y + D+WS G E++T
Sbjct: 177 PVFWY-APECLKECKFYYAS-DVWSFGVTLYELLT 209
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 36 VIRLHDVIPVDFKLFLVFEF-LRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRR 94
+ LH + L+LV ++ + DL L +P +A+ Y+ +++ A+ H
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 195
Query: 95 IIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN-----RYTHEVVTLWYRPPEILL-- 147
+HRD+KP N+L++ +G ++LADFG + MN + + V T Y PEIL
Sbjct: 196 YVHRDIKPDNVLLDVNGHIRLADFG----SCLKMNDDGTVQSSVAVGTPDYISPEILQAM 251
Query: 148 --GAKVYSTTVDIWSAGCIFSEMSY 170
G Y D WS G EM Y
Sbjct: 252 EDGMGKYGPECDWWSLGVCMYEMLY 276
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 22/145 (15%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN-----RYTH 224
Y+ +++ A+ H +HRD+KP N+L++ +G ++LADFG + MN + +
Sbjct: 180 YIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG----SCLKMNDDGTVQSSV 235
Query: 225 EVVTLWYRPPEILL----GAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
V T Y PEIL G Y D WS G EM+ +T F +S ++ +I
Sbjct: 236 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
Query: 281 TLGTPHEDVWPGVSKLPIYKTDFPE 305
HE+ + + P + TD E
Sbjct: 296 -----HEERF----QFPSHVTDVSE 311
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 36 VIRLHDVIPVDFKLFLVFEF-LRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRR 94
+ LH + L+LV ++ + DL L +P +A+ Y+ +++ A+ H
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 211
Query: 95 IIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN-----RYTHEVVTLWYRPPEILL-- 147
+HRD+KP N+L++ +G ++LADFG + MN + + V T Y PEIL
Sbjct: 212 YVHRDIKPDNVLLDVNGHIRLADFGS----CLKMNDDGTVQSSVAVGTPDYISPEILQAM 267
Query: 148 --GAKVYSTTVDIWSAGCIFSEMSY 170
G Y D WS G EM Y
Sbjct: 268 EDGMGKYGPECDWWSLGVCMYEMLY 292
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 22/145 (15%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN-----RYTH 224
Y+ +++ A+ H +HRD+KP N+L++ +G ++LADFG + MN + +
Sbjct: 196 YIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGS----CLKMNDDGTVQSSV 251
Query: 225 EVVTLWYRPPEILL----GAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFR 280
V T Y PEIL G Y D WS G EM+ +T F +S ++ +I
Sbjct: 252 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 311
Query: 281 TLGTPHEDVWPGVSKLPIYKTDFPE 305
HE+ + + P + TD E
Sbjct: 312 -----HEERF----QFPSHVTDVSE 327
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 24/175 (13%)
Query: 23 REISVLKELKHPNVIRLHDVIP--VDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
REI +L+ L H ++++ + + LV E++ L+D+L V + L +
Sbjct: 60 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL--F 117
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV--- 136
Q+ E + Y H++ IHR L +N+L++ +K+ DFGL++A +P + V
Sbjct: 118 AQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKA--VPEGHEYYRVREDG 175
Query: 137 ---TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMSYLYQLLEALRYCHSRRIIH 188
WY PE L K Y + D+WS G L E L YC S + H
Sbjct: 176 DSPVFWY-APECLKECKFYYAS-DVWSFGVT---------LYELLTYCDSNQSPH 219
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV----- 227
Q+ E + Y H++ IHR L +N+L++ +K+ DFGL++A +P + V
Sbjct: 120 QICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKA--VPEGHEYYRVREDGDS 177
Query: 228 -TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L K Y + D+WS G E++T
Sbjct: 178 PVFWY-APECLKECKFYYAS-DVWSFGVTLYELLT 210
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 23 REISVLKELKHPNVIRLHDVIP--VDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
+EI +L+ L H ++I+ + L LV E++ L+D+L + + L +
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL--F 122
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV--- 136
Q+ E + Y HS+ IHR+L +N+L++ +K+ DFGL++A +P + V
Sbjct: 123 AQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKA--VPEGHEYYRVREDG 180
Query: 137 ---TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY PE L K Y + D+WS G E+
Sbjct: 181 DSPVFWY-APECLKEYKFYYAS-DVWSFGVTLYEL 213
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV----- 227
Q+ E + Y HS+ IHR+L +N+L++ +K+ DFGL++A +P + V
Sbjct: 125 QICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKA--VPEGHEYYRVREDGDS 182
Query: 228 -TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L K Y + D+WS G E++T
Sbjct: 183 PVFWY-APECLKEYKFYYAS-DVWSFGVTLYELLT 215
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 33/188 (17%)
Query: 177 ALRYCHSRRIIHRDLKPQNILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 233
A+++ HS I HRD+KP+N+L K LKL DFG ++ T N T +Y
Sbjct: 121 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT--QNALQTPCYTPYYVA 178
Query: 234 PEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGV 293
PE+ LG + Y + D+WS G I ++ F ++ + + PG+
Sbjct: 179 PEV-LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT---------------GQAISPGM 222
Query: 294 S---KLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFN 350
+L Y PEW SE+ A + ++ DP +R++ + H + N
Sbjct: 223 KRRIRLGQYGFPNPEW-----SEV----SEDAKQLIRLLLKTDPTERLTITQFMNHPWIN 273
Query: 351 QVEMVKPT 358
Q +V T
Sbjct: 274 QSMVVPQT 281
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 86 ALRYCHSRRIIHRDLKPQNILIN---KSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
A+++ HS I HRD+KP+N+L K LKL DFG ++ T N T +Y
Sbjct: 121 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT--QNALQTPCYTPYYVA 178
Query: 143 PEILLGAKVYSTTVDIWSAGCIF 165
PE+ LG + Y + D+WS G I
Sbjct: 179 PEV-LGPEKYDKSCDMWSLGVIM 200
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 33/188 (17%)
Query: 177 ALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 233
A+++ HS I HRD+KP+N+L K LKL DFG ++ T N T +Y
Sbjct: 140 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT--QNALQTPCYTPYYVA 197
Query: 234 PEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVWPGV 293
PE+ LG + Y + D+WS G I ++ F ++ + + PG+
Sbjct: 198 PEV-LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT---------------GQAISPGM 241
Query: 294 S---KLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFN 350
+L Y PEW SE+ A + ++ DP +R++ + H + N
Sbjct: 242 KRRIRLGQYGFPNPEW-----SEV----SEDAKQLIRLLLKTDPTERLTITQFMNHPWIN 292
Query: 351 QVEMVKPT 358
Q +V T
Sbjct: 293 QSMVVPQT 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 86 ALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRP 142
A+++ HS I HRD+KP+N+L K LKL DFG ++ T N T +Y
Sbjct: 140 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT--QNALQTPCYTPYYVA 197
Query: 143 PEILLGAKVYSTTVDIWSAGCIF 165
PE+ LG + Y + D+WS G I
Sbjct: 198 PEV-LGPEKYDKSCDMWSLGVIM 219
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRA-FTIP--MNRYTH 224
+SY +Q+ + + SR+ IHRDL +NIL++++ +K+ DFGL+R + P + +
Sbjct: 202 ISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 225 EVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ W P I K+YST D+WS G + E+ +
Sbjct: 262 RLPLKWMAPESIF--DKIYSTKSDVWSYGVLLWEIFS 296
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRA-FTIP--MNRYTHE 134
SY +Q+ + + SR+ IHRDL +NIL++++ +K+ DFGL+R + P + +
Sbjct: 203 SYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTR 262
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ W P I K+YST D+WS G + E+
Sbjct: 263 LPLKWMAPESIF--DKIYSTKSDVWSYGVLLWEI 294
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 29/198 (14%)
Query: 174 LLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
+++AL + HS+ +IHRD+KP N+LIN G +K+ DFG+S + + +
Sbjct: 118 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMA 177
Query: 233 PPEI--LLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLGTPHEDVW 290
P I L K YS DIWS G E+ + F DS GTP + +
Sbjct: 178 PERINPELNQKGYSVKSDIWSLGITMIELAILR--FPYDS-----------WGTPFQQLK 224
Query: 291 PGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYFN 350
+ + P+ KFS VD S+ + + K+R + ++QH +F
Sbjct: 225 ------QVVEEPSPQLPADKFSAEF-------VDFTSQCLKKNSKERPTYPELMQHPFFT 271
Query: 351 QVEMVKPTLAVFPELGYG 368
E +A F +L G
Sbjct: 272 LHESKGTDVASFVKLILG 289
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 65 QTTPVPVPPALAKSYLYQLLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRA 123
QT P + +A S +++AL + HS+ +IHRD+KP N+LIN G +K+ DFG+S
Sbjct: 104 QTIPEDILGKIAVS----IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGY 159
Query: 124 FTIPMNRYTHEVVTLWYRPPEI--LLGAKVYSTTVDIWSAGCIFSEMSYL 171
+ + + P I L K YS DIWS G E++ L
Sbjct: 160 LVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAIL 209
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 23 REISVLKELKHPNVIRLHDVIP--VDFKLFLVFEFL-RQDLKDFLQTTPVPVPPALAKSY 79
+EI +L+ L H ++I+ + L LV E++ L+D+L + + L +
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL--F 122
Query: 80 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV--- 136
Q+ E + Y H++ IHR+L +N+L++ +K+ DFGL++A +P + V
Sbjct: 123 AQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKA--VPEGHEYYRVREDG 180
Query: 137 ---TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
WY PE L K Y + D+WS G E+
Sbjct: 181 DSPVFWY-APECLKEYKFYYAS-DVWSFGVTLYEL 213
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV----- 227
Q+ E + Y H++ IHR+L +N+L++ +K+ DFGL++A +P + V
Sbjct: 125 QICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKA--VPEGHEYYRVREDGDS 182
Query: 228 -TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
WY PE L K Y + D+WS G E++T
Sbjct: 183 PVFWY-APECLKEYKFYYAS-DVWSFGVTLYELLT 215
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 5 ESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL 56
+ +RV V+ V +A L E SV+K +V+RL V+ +V E +
Sbjct: 44 KGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELM 103
Query: 57 RQ-DLKDFL-------QTTPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQNIL 106
DLK +L + P PP L + ++ + + Y ++++ +HR+L +N +
Sbjct: 104 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCM 163
Query: 107 INKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ +K+ DFG++R T + ++ + + PE L V++T+ D+WS G +
Sbjct: 164 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG-VFTTSSDMWSFGVV 222
Query: 165 FSEMSYLYQ 173
E++ L +
Sbjct: 223 LWEITSLAE 231
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++++ +HR+L +N ++ +K+ DFG++R T + ++ +
Sbjct: 139 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T+ D+WS G + E+ +
Sbjct: 199 WMAPESLKDG-VFTTSSDMWSFGVVLWEITS 228
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 5 ESRPRSRVQVEGVPSTA--------LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFL 56
+ +RV V+ V +A L E SV+K +V+RL V+ +V E +
Sbjct: 43 KGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELM 102
Query: 57 RQ-DLKDFL-------QTTPVPVPPALAK--SYLYQLLEALRYCHSRRIIHRDLKPQNIL 106
DLK +L + P PP L + ++ + + Y ++++ +HR+L +N +
Sbjct: 103 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCM 162
Query: 107 INKSGALKLADFGLSRAF--TIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCI 164
+ +K+ DFG++R T + ++ + + PE L V++T+ D+WS G +
Sbjct: 163 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG-VFTTSSDMWSFGVV 221
Query: 165 FSEMSYLYQ 173
E++ L +
Sbjct: 222 LWEITSLAE 230
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAF--TIPMNRYTHEVVTLW 230
++ + + Y ++++ +HR+L +N ++ +K+ DFG++R T + ++ +
Sbjct: 138 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 231 YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ PE L V++T+ D+WS G + E+ +
Sbjct: 198 WMAPESLKDG-VFTTSSDMWSFGVVLWEITS 227
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 98/222 (44%), Gaps = 76/222 (34%)
Query: 20 TALREISVLKELKH-----PN---VIRLHDVIPVDFKL--------FLVFEFLRQDL-KD 62
TAL EI +LK ++ PN V++L D DFK+ +VFE L L K
Sbjct: 73 TALDEIKLLKCVRESDPSDPNKDMVVQLID----DFKISGMNGIHVCMVFEVLGHHLLKW 128
Query: 63 FLQTTPVPVPPALAKSYLYQLLEALRYCHSR-RIIHRDLKPQNILI-------------- 107
+++ +P KS + Q+L+ L Y HS+ +IIH D+KP+NIL+
Sbjct: 129 IIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEA 188
Query: 108 ---NKSGA------------------------------LKLADFGLSRAFTIPMNRYTHE 134
K+GA +K+AD G + +T +
Sbjct: 189 TEWQKAGAPPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNA---CWVHKHFTED 245
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS---YLYQ 173
+ T YR E+L+GA YST DIWS C+ E++ YL++
Sbjct: 246 IQTRQYRSIEVLIGAG-YSTPADIWSTACMAFELATGDYLFE 286
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 70/170 (41%), Gaps = 58/170 (34%)
Query: 169 SYLYQLLEALRYCHSR-RIIHRDLKPQNILI-----------------NKSGA------- 203
S + Q+L+ L Y HS+ +IIH D+KP+NIL+ K+GA
Sbjct: 144 SIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSA 203
Query: 204 -----------------------LKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 240
+K+AD G + +T ++ T YR E+L+GA
Sbjct: 204 VSTAPAADLLVNPLDPRNADKIRVKIADLGNA---CWVHKHFTEDIQTRQYRSIEVLIGA 260
Query: 241 KVYSTTVDIWSAGCIFSEMITKKTLFAGDS------EIDQLFRIFRTLGT 284
YST DIWS C+ E+ T LF S + D + I LG+
Sbjct: 261 G-YSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGS 309
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 83/182 (45%), Gaps = 34/182 (18%)
Query: 168 MSYLYQLLEALRYCHS---RRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPMNRYT 223
MS+ Q + + Y HS + +IHRDLKP N+L+ G LK+ DFG + M T
Sbjct: 106 MSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM---T 162
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLG 283
+ + + PE+ G+ YS D++S G I E+IT++ F EI FR +
Sbjct: 163 NNKGSAAWMAPEVFEGSN-YSEKCDVFSWGIILWEVITRRKPF---DEIGG--PAFRIMW 216
Query: 284 TPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
H P P+ K NLP P+ + ++ + DP QR S + I
Sbjct: 217 AVHNGTRP-----PLIK---------------NLPKPIE-SLMTRCWSKDPSQRPSMEEI 255
Query: 344 LQ 345
++
Sbjct: 256 VK 257
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 17/154 (11%)
Query: 24 EISVLKELKHPNVIRLHDVI--PVDFKLFLVFEFLRQ-DLKDFLQTT-PVPV-PPALAKS 78
E+ L + HPN+++L+ PV LV E+ L + L P+P A A S
Sbjct: 52 ELRQLSRVNHPNIVKLYGACLNPV----CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 107
Query: 79 YLYQLLEALRYCHS---RRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPMNRYTHE 134
+ Q + + Y HS + +IHRDLKP N+L+ G LK+ DFG + M T+
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM---TNN 164
Query: 135 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ + PE+ G+ YS D++S G I E+
Sbjct: 165 KGSAAWMAPEVFEGSN-YSEKCDVFSWGIILWEV 197
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 83/182 (45%), Gaps = 34/182 (18%)
Query: 168 MSYLYQLLEALRYCHS---RRIIHRDLKPQNILINKSGA-LKLADFGLSRAFTIPMNRYT 223
MS+ Q + + Y HS + +IHRDLKP N+L+ G LK+ DFG + M T
Sbjct: 105 MSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM---T 161
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTLG 283
+ + + PE+ G+ YS D++S G I E+IT++ F EI FR +
Sbjct: 162 NNKGSAAWMAPEVFEGSN-YSEKCDVFSWGIILWEVITRRKPF---DEIGG--PAFRIMW 215
Query: 284 TPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTI 343
H P P+ K NLP P+ + ++ + DP QR S + I
Sbjct: 216 AVHNGTRP-----PLIK---------------NLPKPIE-SLMTRCWSKDPSQRPSMEEI 254
Query: 344 LQ 345
++
Sbjct: 255 VK 256
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 17/167 (10%)
Query: 11 RVQVEGVPSTALREISVLKELKHPNVIRLHDVI--PVDFKLFLVFEFLRQ-DLKDFLQTT 67
+++ E + E+ L + HPN+++L+ PV LV E+ L + L
Sbjct: 38 QIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPV----CLVMEYAEGGSLYNVLHGA 93
Query: 68 -PVPV-PPALAKSYLYQLLEALRYCHS---RRIIHRDLKPQNILINKSGA-LKLADFGLS 121
P+P A A S+ Q + + Y HS + +IHRDLKP N+L+ G LK+ DFG +
Sbjct: 94 EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153
Query: 122 RAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
M T+ + + PE+ G+ YS D++S G I E+
Sbjct: 154 CDIQTHM---TNNKGSAAWMAPEVFEGSN-YSEKCDVFSWGIILWEV 196
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 24/184 (13%)
Query: 177 ALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTIPMN-------RYTHEV 226
AL + H++ I HRDLKP+NIL K +K+ DF L + + T
Sbjct: 123 ALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC 182
Query: 227 VTLWYRPPEILL----GAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
+ Y PE++ A Y D+WS G + M++ F G D +
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVC 242
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKT 342
++ + + K +FP+ K ++ I A D+ SK++ D KQR+SA
Sbjct: 243 RVCQNKLFESIQE---GKYEFPD---KDWAHI----SSEAKDLISKLLVRDAKQRLSAAQ 292
Query: 343 ILQH 346
+LQH
Sbjct: 293 VLQH 296
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 31/170 (18%)
Query: 19 STALREISVLKELK-HPNVIRLHDVIPVDFKLFLVFEFLR--------QDLKDFLQTTPV 69
S RE+ L + + + N++ L + D + +LVFE L+ Q K F +
Sbjct: 55 SRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNERE-- 112
Query: 70 PVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILI---NKSGALKLADFGLSRAFTI 126
A + + AL + H++ I HRDLKP+NIL K +K+ DF L +
Sbjct: 113 ------ASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKL 166
Query: 127 PMN-------RYTHEVVTLWYRPPEILL----GAKVYSTTVDIWSAGCIF 165
+ T + Y PE++ A Y D+WS G +
Sbjct: 167 NNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVL 216
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 21 ALREISVLKELKHPNVIRLH---DVIPVDFK-------------LFLVFEFL-RQDLKDF 63
A RE+ L +L H N++ + D D + LF+ EF + L+ +
Sbjct: 51 AEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQW 110
Query: 64 LQTT-PVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR 122
++ + LA Q+ + + Y HS+++I+RDLKP NI + + +K+ DFGL
Sbjct: 111 IEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVT 170
Query: 123 AFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ R + TL Y PE + ++ Y VD+++ G I +E+
Sbjct: 171 SLKNDGKRXRSK-GTLRYMSPE-QISSQDYGKEVDLYALGLILAEL 214
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
Q+ + + Y HS+++I+RDLKP NI + + +K+ DFGL + R + TL Y
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK-GTLRYM 188
Query: 233 PPEILLGAKVYSTTVDIWSAGCIFSEMI 260
PE + ++ Y VD+++ G I +E++
Sbjct: 189 SPE-QISSQDYGKEVDLYALGLILAELL 215
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDV-IPVDFKLFLVFEFLRQ- 58
K+ + +R+ G S L E ++K+ HPNV+ L + + + +V +++
Sbjct: 57 KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 116
Query: 59 DLKDFLQT-TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL++F++ T P L + Q+ + ++Y S++ +HRDL +N ++++ +K+AD
Sbjct: 117 DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 175
Query: 118 FGLSRAFTIPMNRYTHEVVTLWYRPPEIL---------LGAKVYSTTVDIWSAGCIFSEM 168
FGL+R + Y E ++ + L L + ++T D+WS G + E+
Sbjct: 176 FGLAR------DMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 229
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ + Q+ + ++Y S++ +HRDL +N ++++ +K+ADFGL+R + Y E
Sbjct: 135 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR------DMYDKEXX 188
Query: 228 TLWYRPPEIL---------LGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
++ + L L + ++T D+WS G + E++T+ D F I
Sbjct: 189 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDI 245
Query: 279 FRTLGTPHEDVWPGVSKLPIYKTDFPEWRPK-----KFSEILN 316
L + P P+Y+ W PK FSE+++
Sbjct: 246 TVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 288
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 8/143 (5%)
Query: 36 VIRLHDVIPVDFKLFLVFEF-LRQDLKDFLQTTPVPVPPALAKSYLYQLLEALRYCHSRR 94
+ +LH + L+LV E+ + DL L +P +A+ YL +++ A+ H
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG 182
Query: 95 IIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN-RYTHEVVTLWYRPPEILLGAKVYS 153
+HRD+KP NIL+++ G ++LADFG R V T Y PEIL
Sbjct: 183 YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGP 242
Query: 154 TT------VDIWSAGCIFSEMSY 170
T D W+ G EM Y
Sbjct: 243 GTGSYGPECDWWALGVFAYEMFY 265
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 166 SEMS--YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN-RY 222
+EM+ YL +++ A+ H +HRD+KP NIL+++ G ++LADFG R
Sbjct: 161 AEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRS 220
Query: 223 THEVVTLWYRPPEILLGAKVYSTT------VDIWSAGCIFSEMITKKTLFAGDSEIDQLF 276
V T Y PEIL T D W+ G EM +T F DS +
Sbjct: 221 LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYG 280
Query: 277 RI 278
+I
Sbjct: 281 KI 282
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y ++ L + S+ II+RDLK N++++ G +K+ADFG+ + T
Sbjct: 126 YAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTP 185
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFR 277
Y PEI + + Y +VD W+ G + EM+ + F G+ E D+LF+
Sbjct: 186 DYIAPEI-IAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQ 231
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 3/158 (1%)
Query: 12 VQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVP 70
+Q + V T + + + K P + +LH +L+ V E++ DL +Q
Sbjct: 59 IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRF 118
Query: 71 VPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR 130
P A Y ++ L + S+ II+RDLK N++++ G +K+ADFG+ +
Sbjct: 119 KEPH-AVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT 177
Query: 131 YTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T Y PEI + + Y +VD W+ G + EM
Sbjct: 178 TKXFCGTPDYIAPEI-IAYQPYGKSVDWWAFGVLLYEM 214
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
+ E ++K L HP++++L +I + ++ + +L +L+ + Y
Sbjct: 61 MSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 120
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL--- 138
Q+ +A+ Y S +HRD+ +NIL+ +KL DFGLSR + + Y V L
Sbjct: 121 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIK 179
Query: 139 WYRPPEILLGAKVYSTTVDIWS-AGCIFSEMSYLYQ 173
W P I + ++T D+W A C++ +S+ Q
Sbjct: 180 WMSPESI--NFRRFTTASDVWMFAVCMWEILSFGKQ 213
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q+ +A+ Y S +HRD+ +NIL+ +KL DFGLSR + + Y V L
Sbjct: 118 YSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRL 176
Query: 230 ---WYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
W P I + ++T D+W E+++
Sbjct: 177 PIKWMSPESI--NFRRFTTASDVWMFAVCMWEILS 209
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
+ E ++K L HP++++L +I + ++ + +L +L+ + Y
Sbjct: 73 MSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 132
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL--- 138
Q+ +A+ Y S +HRD+ +NIL+ +KL DFGLSR + + Y V L
Sbjct: 133 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIK 191
Query: 139 WYRPPEILLGAKVYSTTVDIWS-AGCIFSEMSYLYQ 173
W P I + ++T D+W A C++ +S+ Q
Sbjct: 192 WMSPESI--NFRRFTTASDVWMFAVCMWEILSFGKQ 225
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q+ +A+ Y S +HRD+ +NIL+ +KL DFGLSR + + Y V L
Sbjct: 130 YSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRL 188
Query: 230 ---WYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
W P I + ++T D+W E+++
Sbjct: 189 PIKWMSPESI--NFRRFTTASDVWMFAVCMWEILS 221
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 91/230 (39%), Gaps = 62/230 (26%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILIN-------------------------KSGAL 204
Y ++L+AL Y + H DLKP+NIL++ KS +
Sbjct: 142 YCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGI 201
Query: 205 KLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT 264
KL DFG + T + + + T YR PE++L + + D+WS GC+ +E+ T
Sbjct: 202 KLIDFGCA---TFKSDYHGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGSL 257
Query: 265 LFAGDSEIDQL---------------FRIFRTLGTPHED------VWP----GVSKLPIY 299
LF ++ L + +T G+ + + WP ++ +
Sbjct: 258 LFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHV 317
Query: 300 KTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYF 349
K P ++ K L D I+ +DP R S +L+H++
Sbjct: 318 KKCLPLYKIIKHE--------LFCDFLYSILQIDPTLRPSPAELLKHKFL 359
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 77 KSYLYQLLEALRYCHSRRIIHRDLKPQNILIN-------------------------KSG 111
K Y ++L+AL Y + H DLKP+NIL++ KS
Sbjct: 140 KLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKST 199
Query: 112 ALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+KL DFG + T + + + T YR PE++L + + D+WS GC+ +E+
Sbjct: 200 GIKLIDFGCA---TFKSDYHGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAEL 252
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y ++ L + S+ II+RDLK N++++ G +K+ADFG+ + T
Sbjct: 447 YAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTP 506
Query: 230 WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFR 277
Y PEI + + Y +VD W+ G + EM+ + F G+ E D+LF+
Sbjct: 507 DYIAPEI-IAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQ 552
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 3/158 (1%)
Query: 12 VQVEGVPSTALREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVP 70
+Q + V T + + + K P + +LH +L+ V E++ DL +Q
Sbjct: 380 IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRF 439
Query: 71 VPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR 130
P A Y ++ L + S+ II+RDLK N++++ G +K+ADFG+ +
Sbjct: 440 KEPH-AVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT 498
Query: 131 YTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
T Y PEI + + Y +VD W+ G + EM
Sbjct: 499 TKXFCGTPDYIAPEI-IAYQPYGKSVDWWAFGVLLYEM 535
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDV-IPVDFKLFLVFEFLRQ- 58
K+ + +R+ G S L E ++K+ HPNV+ L + + + +V +++
Sbjct: 59 KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 118
Query: 59 DLKDFLQT-TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL++F++ T P L + Q+ + +++ S++ +HRDL +N ++++ +K+AD
Sbjct: 119 DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVAD 177
Query: 118 FGLSR-----AFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
FGL+R F N+ ++ W L + ++T D+WS G + E+
Sbjct: 178 FGLARDMLDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWEL 231
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-----AFTIPMNRY 222
+ + Q+ + +++ S++ +HRDL +N ++++ +K+ADFGL+R F N+
Sbjct: 137 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKT 196
Query: 223 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
++ W L + ++T D+WS G + E++T+ D F I L
Sbjct: 197 GAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYL 251
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPK-----KFSEILN 316
+ P P+Y+ W PK FSE+++
Sbjct: 252 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
+ E ++K L HP++++L +I + ++ + +L +L+ + Y
Sbjct: 57 MSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 116
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL--- 138
Q+ +A+ Y S +HRD+ +NIL+ +KL DFGLSR + + Y V L
Sbjct: 117 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIK 175
Query: 139 WYRPPEILLGAKVYSTTVDIWS-AGCIFSEMSYLYQ 173
W P I + ++T D+W A C++ +S+ Q
Sbjct: 176 WMSPESI--NFRRFTTASDVWMFAVCMWEILSFGKQ 209
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 170 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL 229
Y Q+ +A+ Y S +HRD+ +NIL+ +KL DFGLSR + + Y V L
Sbjct: 114 YSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRL 172
Query: 230 ---WYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
W P I + ++T D+W E+++
Sbjct: 173 PIKWMSPESI--NFRRFTTASDVWMFAVCMWEILS 205
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDV-IPVDFKLFLVFEFLRQ- 58
K+ + +R+ G S L E ++K+ HPNV+ L + + + +V +++
Sbjct: 59 KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 118
Query: 59 DLKDFLQT-TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL++F++ T P L + Q+ + +++ S++ +HRDL +N ++++ +K+AD
Sbjct: 119 DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVAD 177
Query: 118 FGLSR-----AFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
FGL+R F N+ ++ W L + ++T D+WS G + E+
Sbjct: 178 FGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWEL 231
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-----AFTIPMNRY 222
+ + Q+ + +++ S++ +HRDL +N ++++ +K+ADFGL+R F N+
Sbjct: 137 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 196
Query: 223 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
++ W L + ++T D+WS G + E++T+ D F I L
Sbjct: 197 GAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYL 251
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPK-----KFSEILN 316
+ P P+Y+ W PK FSE+++
Sbjct: 252 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDV-IPVDFKLFLVFEFLRQ- 58
K+ + +R+ G S L E ++K+ HPNV+ L + + + +V +++
Sbjct: 58 KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 117
Query: 59 DLKDFLQT-TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL++F++ T P L + Q+ + ++Y S++ +HRDL +N ++++ +K+AD
Sbjct: 118 DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 118 FGLSR-----AFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
FGL+R + N+ ++ W L + ++T D+WS G + E+
Sbjct: 177 FGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWEL 230
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-----AFTIPMNRY 222
+ + Q+ + ++Y S++ +HRDL +N ++++ +K+ADFGL+R + N+
Sbjct: 136 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 195
Query: 223 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
++ W L + ++T D+WS G + E++T+ D F I L
Sbjct: 196 GAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYL 250
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPK-----KFSEILN 316
+ P P+Y+ W PK FSE+++
Sbjct: 251 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDV-IPVDFKLFLVFEFLRQ- 58
K+ + +R+ G S L E ++K+ HPNV+ L + + + +V +++
Sbjct: 56 KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 115
Query: 59 DLKDFLQT-TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL++F++ T P L + Q+ + +++ S++ +HRDL +N ++++ +K+AD
Sbjct: 116 DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVAD 174
Query: 118 FGLSR-----AFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
FGL+R F N+ ++ W L + ++T D+WS G + E+
Sbjct: 175 FGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWEL 228
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-----AFTIPMNRY 222
+ + Q+ + +++ S++ +HRDL +N ++++ +K+ADFGL+R F N+
Sbjct: 134 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 193
Query: 223 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
++ W L + ++T D+WS G + E++T+ D F I L
Sbjct: 194 GAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYL 248
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPK-----KFSEILN 316
+ P P+Y+ W PK FSE+++
Sbjct: 249 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDV-IPVDFKLFLVFEFLRQ- 58
K+ + +R+ G S L E ++K+ HPNV+ L + + + +V +++
Sbjct: 57 KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 116
Query: 59 DLKDFLQT-TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL++F++ T P L + Q+ + ++Y S++ +HRDL +N ++++ +K+AD
Sbjct: 117 DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 175
Query: 118 FGLSRAFTIPMNRYTHEVVTLWYRPPEIL---------LGAKVYSTTVDIWSAGCIFSEM 168
FGL+R + Y E ++ + L L + ++T D+WS G + E+
Sbjct: 176 FGLAR------DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 229
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ + Q+ + ++Y S++ +HRDL +N ++++ +K+ADFGL+R + Y E
Sbjct: 135 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR------DMYDKEYY 188
Query: 228 TLWYRPPEIL---------LGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
++ + L L + ++T D+WS G + E++T+ D F I
Sbjct: 189 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDI 245
Query: 279 FRTLGTPHEDVWPGVSKLPIYKTDFPEWRPK-----KFSEILN 316
L + P P+Y+ W PK FSE+++
Sbjct: 246 TVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 288
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 33/174 (18%)
Query: 22 LREISVLKELK-HPNVIRLHDVIPV--------DFKLFLVFEFLRQDLKDFLQT--TPVP 70
++E+ +K+L HPN+++ + + L+ E + L +FL+ + P
Sbjct: 73 IQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGP 132
Query: 71 VPPALAKSYLYQLLEALRYCHSRR--IIHRDLKPQNILINKSGALKLADFGLSR------ 122
+ YQ A+++ H ++ IIHRDLK +N+L++ G +KL DFG +
Sbjct: 133 LSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYP 192
Query: 123 --AFTIPMNRYTHEVVTL----WYRPPEILLGAKVYST-----TVDIWSAGCIF 165
+++ E +T YR PEI+ +YS DIW+ GCI
Sbjct: 193 DYSWSAQRRALVEEEITRNTTPMYRTPEII---DLYSNFPIGEKQDIWALGCIL 243
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 22/108 (20%)
Query: 168 MSYLYQLLEALRYCHSRR--IIHRDLKPQNILINKSGALKLADFGLSR--------AFTI 217
+ YQ A+++ H ++ IIHRDLK +N+L++ G +KL DFG + +++
Sbjct: 139 LKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSA 198
Query: 218 PMNRYTHEVVTL----WYRPPEILLGAKVYST-----TVDIWSAGCIF 256
E +T YR PEI+ +YS DIW+ GCI
Sbjct: 199 QRRALVEEEITRNTTPMYRTPEII---DLYSNFPIGEKQDIWALGCIL 243
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDV-IPVDFKLFLVFEFLRQ- 58
K+ + +R+ G S L E ++K+ HPNV+ L + + + +V +++
Sbjct: 53 KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 112
Query: 59 DLKDFLQT-TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL++F++ T P L + Q+ + ++Y S++ +HRDL +N ++++ +K+AD
Sbjct: 113 DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 171
Query: 118 FGLSR-----AFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
FGL+R + N+ ++ W L + ++T D+WS G + E+
Sbjct: 172 FGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWEL 225
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-----AFTIPMNRY 222
+ + Q+ + ++Y S++ +HRDL +N ++++ +K+ADFGL+R + N+
Sbjct: 131 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 190
Query: 223 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
++ W L + ++T D+WS G + E++T+ D F I L
Sbjct: 191 GAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYL 245
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPK-----KFSEILN 316
+ P P+Y+ W PK FSE+++
Sbjct: 246 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDV-IPVDFKLFLVFEFLRQ- 58
K+ + +R+ G S L E ++K+ HPNV+ L + + + +V +++
Sbjct: 58 KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 117
Query: 59 DLKDFLQT-TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL++F++ T P L + Q+ + +++ S++ +HRDL +N ++++ +K+AD
Sbjct: 118 DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 118 FGLSR-----AFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
FGL+R F N+ ++ W L + ++T D+WS G + E+
Sbjct: 177 FGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWEL 230
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-----AFTIPMNRY 222
+ + Q+ + +++ S++ +HRDL +N ++++ +K+ADFGL+R F N+
Sbjct: 136 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 195
Query: 223 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
++ W L + ++T D+WS G + E++T+ D F I L
Sbjct: 196 GAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYL 250
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPK-----KFSEILN 316
+ P P+Y+ W PK FSE+++
Sbjct: 251 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDV-IPVDFKLFLVFEFLRQ- 58
K+ + +R+ G S L E ++K+ HPNV+ L + + + +V +++
Sbjct: 56 KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 115
Query: 59 DLKDFLQT-TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL++F++ T P L + Q+ + ++Y S++ +HRDL +N ++++ +K+AD
Sbjct: 116 DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 174
Query: 118 FGLSRAFTIPMNRYTHEVVTLWYRPPEIL---------LGAKVYSTTVDIWSAGCIFSEM 168
FGL+R + Y E ++ + L L + ++T D+WS G + E+
Sbjct: 175 FGLAR------DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 228
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ + Q+ + ++Y S++ +HRDL +N ++++ +K+ADFGL+R + Y E
Sbjct: 134 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR------DMYDKEYY 187
Query: 228 TLWYRPPEIL---------LGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
++ + L L + ++T D+WS G + E++T+ D F I
Sbjct: 188 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDI 244
Query: 279 FRTLGTPHEDVWPGVSKLPIYKTDFPEWRPK-----KFSEILN 316
L + P P+Y+ W PK FSE+++
Sbjct: 245 TVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDV-IPVDFKLFLVFEFLRQ- 58
K+ + +R+ G S L E ++K+ HPNV+ L + + + +V +++
Sbjct: 55 KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 114
Query: 59 DLKDFLQT-TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL++F++ T P L + Q+ + ++Y S++ +HRDL +N ++++ +K+AD
Sbjct: 115 DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 173
Query: 118 FGLSRAFTIPMNRYTHEVVTLWYRPPEIL---------LGAKVYSTTVDIWSAGCIFSEM 168
FGL+R + Y E ++ + L L + ++T D+WS G + E+
Sbjct: 174 FGLAR------DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 227
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ + Q+ + ++Y S++ +HRDL +N ++++ +K+ADFGL+R + Y E
Sbjct: 133 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR------DMYDKEYY 186
Query: 228 TLWYRPPEIL---------LGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
++ + L L + ++T D+WS G + E++T+ D F I
Sbjct: 187 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDI 243
Query: 279 FRTLGTPHEDVWPGVSKLPIYKTDFPEWRPK-----KFSEILN 316
L + P P+Y+ W PK FSE+++
Sbjct: 244 TVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 286
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDV-IPVDFKLFLVFEFLRQ- 58
K+ + +R+ G S L E ++K+ HPNV+ L + + + +V +++
Sbjct: 58 KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 117
Query: 59 DLKDFLQT-TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL++F++ T P L + Q+ + +++ S++ +HRDL +N ++++ +K+AD
Sbjct: 118 DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 118 FGLSR-----AFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
FGL+R F N+ ++ W L + ++T D+WS G + E+
Sbjct: 177 FGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWEL 230
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-----AFTIPMNRY 222
+ + Q+ + +++ S++ +HRDL +N ++++ +K+ADFGL+R F N+
Sbjct: 136 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 195
Query: 223 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
++ W L + ++T D+WS G + E++T+ D F I L
Sbjct: 196 GAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYL 250
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPK-----KFSEILN 316
+ P P+Y+ W PK FSE+++
Sbjct: 251 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDV-IPVDFKLFLVFEFLRQ- 58
K+ + +R+ G S L E ++K+ HPNV+ L + + + +V +++
Sbjct: 76 KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 135
Query: 59 DLKDFLQT-TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL++F++ T P L + Q+ + ++Y S++ +HRDL +N ++++ +K+AD
Sbjct: 136 DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 194
Query: 118 FGLSRAFTIPMNRYTHEVVTLWYRPPEIL---------LGAKVYSTTVDIWSAGCIFSEM 168
FGL+R + Y E ++ + L L + ++T D+WS G + E+
Sbjct: 195 FGLAR------DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 248
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ + Q+ + ++Y S++ +HRDL +N ++++ +K+ADFGL+R + Y E
Sbjct: 154 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR------DMYDKEYY 207
Query: 228 TLWYRPPEIL---------LGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
++ + L L + ++T D+WS G + E++T+ D F I
Sbjct: 208 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDI 264
Query: 279 FRTLGTPHEDVWPGVSKLPIYKTDFPEWRPK-----KFSEILN 316
L + P P+Y+ W PK FSE+++
Sbjct: 265 TVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 307
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDV-IPVDFKLFLVFEFLRQ- 58
K+ + +R+ G S L E ++K+ HPNV+ L + + + +V +++
Sbjct: 63 KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 122
Query: 59 DLKDFLQT-TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL++F++ T P L + Q+ + +++ S++ +HRDL +N ++++ +K+AD
Sbjct: 123 DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVAD 181
Query: 118 FGLSR-----AFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
FGL+R F N+ ++ W L + ++T D+WS G + E+
Sbjct: 182 FGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWEL 235
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-----AFTIPMNRY 222
+ + Q+ + +++ S++ +HRDL +N ++++ +K+ADFGL+R F N+
Sbjct: 141 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 200
Query: 223 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
++ W L + ++T D+WS G + E++T+ D F I L
Sbjct: 201 GAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYL 255
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPK-----KFSEILN 316
+ P P+Y+ W PK FSE+++
Sbjct: 256 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 294
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDV-IPVDFKLFLVFEFLRQ- 58
K+ + +R+ G S L E ++K+ HPNV+ L + + + +V +++
Sbjct: 58 KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 117
Query: 59 DLKDFLQT-TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL++F++ T P L + Q+ + ++Y S++ +HRDL +N ++++ +K+AD
Sbjct: 118 DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 118 FGLSRAFTIPMNRYTHEVVTLWYRPPEIL---------LGAKVYSTTVDIWSAGCIFSEM 168
FGL+R + Y E ++ + L L + ++T D+WS G + E+
Sbjct: 177 FGLAR------DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ + Q+ + ++Y S++ +HRDL +N ++++ +K+ADFGL+R + Y E
Sbjct: 136 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR------DMYDKEYY 189
Query: 228 TLWYRPPEIL---------LGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
++ + L L + ++T D+WS G + E++T+ D F I
Sbjct: 190 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDI 246
Query: 279 FRTLGTPHEDVWPGVSKLPIYKTDFPEWRPK-----KFSEILN 316
L + P P+Y+ W PK FSE+++
Sbjct: 247 TVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDV-IPVDFKLFLVFEFLRQ- 58
K+ + +R+ G S L E ++K+ HPNV+ L + + + +V +++
Sbjct: 50 KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 109
Query: 59 DLKDFLQT-TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL++F++ T P L + Q+ + ++Y S++ +HRDL +N ++++ +K+AD
Sbjct: 110 DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 168
Query: 118 FGLSR-----AFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
FGL+R + N+ ++ W L + ++T D+WS G + E+
Sbjct: 169 FGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWEL 222
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-----AFTIPMNRY 222
+ + Q+ + ++Y S++ +HRDL +N ++++ +K+ADFGL+R + N+
Sbjct: 128 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 187
Query: 223 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
++ W L + ++T D+WS G + E++T+ D F I L
Sbjct: 188 GAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYL 242
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPK-----KFSEILN 316
+ P P+Y+ W PK FSE+++
Sbjct: 243 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 281
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDV-IPVDFKLFLVFEFLRQ- 58
K+ + +R+ G S L E ++K+ HPNV+ L + + + +V +++
Sbjct: 77 KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 136
Query: 59 DLKDFLQT-TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL++F++ T P L + Q+ + ++Y S++ +HRDL +N ++++ +K+AD
Sbjct: 137 DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 195
Query: 118 FGLSRAFTIPMNRYTHEVVTLWYRPPEIL---------LGAKVYSTTVDIWSAGCIFSEM 168
FGL+R + Y E ++ + L L + ++T D+WS G + E+
Sbjct: 196 FGLAR------DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 249
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ + Q+ + ++Y S++ +HRDL +N ++++ +K+ADFGL+R + Y E
Sbjct: 155 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR------DMYDKEYY 208
Query: 228 TLWYRPPEIL---------LGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
++ + L L + ++T D+WS G + E++T+ D F I
Sbjct: 209 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDI 265
Query: 279 FRTLGTPHEDVWPGVSKLPIYKTDFPEWRPK-----KFSEILN 316
L + P P+Y+ W PK FSE+++
Sbjct: 266 TVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 308
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 1 KVSDESRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDV-IPVDFKLFLVFEFLRQ- 58
K+ + +R+ G S L E ++K+ HPNV+ L + + + +V +++
Sbjct: 117 KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 176
Query: 59 DLKDFLQT-TPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLAD 117
DL++F++ T P L + Q+ + +++ S++ +HRDL +N ++++ +K+AD
Sbjct: 177 DLRNFIRNETHNPTVKDLI-GFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVAD 235
Query: 118 FGLSR-----AFTIPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
FGL+R F N+ ++ W L + ++T D+WS G + E+
Sbjct: 236 FGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWEL 289
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR-----AFTIPMNRY 222
+ + Q+ + +++ S++ +HRDL +N ++++ +K+ADFGL+R F N+
Sbjct: 195 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 254
Query: 223 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRIFRTL 282
++ W L + ++T D+WS G + E++T+ D F I L
Sbjct: 255 GAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYL 309
Query: 283 GTPHEDVWPGVSKLPIYKTDFPEWRPK-----KFSEILN 316
+ P P+Y+ W PK FSE+++
Sbjct: 310 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 348
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 62 DFLQTTPVPVPPALAKSYLYQLLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGL 120
D QT P + +A S +++AL + HS+ +IHRD+KP N+LIN G +K DFG+
Sbjct: 128 DKGQTIPEDILGKIAVS----IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGI 183
Query: 121 SRAFTIPMNRYTHEVVTLWYRPPEI--LLGAKVYSTTVDIWSAGCIFSEMSYL 171
S + + + P I L K YS DIWS G E++ L
Sbjct: 184 SGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAIL 236
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 174 LLEALRYCHSR-RIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
+++AL + HS+ +IHRD+KP N+LIN G +K DFG+S + + +
Sbjct: 145 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXA 204
Query: 233 PPEI--LLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI-FRTLGTPHEDV 289
P I L K YS DIWS G E+ + R + + GTP + +
Sbjct: 205 PERINPELNQKGYSVKSDIWSLGITXIEL--------------AILRFPYDSWGTPFQQL 250
Query: 290 WPGVSKLPIYKTDFPEWRPKKFSEILNLPDPLAVDVFSKIMALDPKQRVSAKTILQHEYF 349
V + P+ KFS VD S+ + + K+R + + QH +F
Sbjct: 251 KQVVEEPS------PQLPADKFSAEF-------VDFTSQCLKKNSKERPTYPELXQHPFF 297
Query: 350 NQVEMVKPTLAVFPEL 365
E +A F +L
Sbjct: 298 TLHESKGTDVASFVKL 313
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 19/165 (11%)
Query: 24 EISVLKELKHPNVIRLHDV----IPVDFKLFLVFEFL-RQDLKDFLQTTPVP------VP 72
E+ L +KH N+++ VD L+L+ F + L DFL+ V +
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIA 127
Query: 73 PALAK--SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNR 130
+A+ +YL++ + L+ H I HRD+K +N+L+ + +ADFGL+ F +
Sbjct: 128 ETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSA 187
Query: 131 Y-TH-EVVTLWYRPPEILLGAKVYSTT----VDIWSAGCIFSEMS 169
TH +V T Y PE+L GA + +D+++ G + E++
Sbjct: 188 GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELA 232
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 13/127 (10%)
Query: 159 WSAGCIFSE-----MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSR 213
W+ C +E ++YL++ + L+ H I HRD+K +N+L+ + +ADFGL+
Sbjct: 120 WNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179
Query: 214 AFTIPMNRY-TH-EVVTLWYRPPEILLGAKVYSTT----VDIWSAGCIFSEMITKKTLFA 267
F + TH +V T Y PE+L GA + +D+++ G + E+ ++ T A
Sbjct: 180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCT--A 237
Query: 268 GDSEIDQ 274
D +D+
Sbjct: 238 ADGPVDE 244
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 23 REISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLY 81
RE L+ P+V+ +HD +D +L++ + DL L+ P+ P A + +
Sbjct: 83 REARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQG-PLAPPRAVAIVR 141
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP-MNRYTHEVVTLWY 140
Q+ AL H+ HRD+KP+NIL++ L DFG++ A T + + + V TL+Y
Sbjct: 142 QIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYY 201
Query: 141 RPPEILLGAKVYST-TVDIWSAGCIFSE 167
PE ++ ++T DI++ C+ E
Sbjct: 202 XAPERF--SESHATYRADIYALTCVLYE 227
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 188 HRDLKPQNILINKSGALKLADFGLSRAFTIP-MNRYTHEVVTLWYRPPEILLGAKVYST- 245
HRD+KP+NIL++ L DFG++ A T + + + V TL+Y PE ++ ++T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERF--SESHATY 214
Query: 246 TVDIWSAGCIFSEMITKKTLFAGD 269
DI++ C+ E +T + GD
Sbjct: 215 RADIYALTCVLYECLTGSPPYQGD 238
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 100/230 (43%), Gaps = 78/230 (33%)
Query: 14 VEGVPSTALREISVLKELKH-----PN---VIRLHDVIPVDFKL--------FLVFEFLR 57
E TAL EI +LK +++ PN V++L D DFK+ +VFE L
Sbjct: 73 AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLD----DFKISGVNGTHICMVFEVLG 128
Query: 58 QDL-KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSR-RIIHRDLKPQNILIN------- 108
L K +++ +P K + Q+L+ L Y H++ RIIH D+KP+NIL++
Sbjct: 129 HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIR 188
Query: 109 ----------KSGA--------------------------------LKLADFGLSRAFTI 126
+SGA +K+AD G +
Sbjct: 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNA---CW 245
Query: 127 PMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS---YLYQ 173
+T ++ T YR E+L+G+ Y+T DIWS C+ E++ YL++
Sbjct: 246 VHKHFTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFE 294
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 54/146 (36%)
Query: 171 LYQLLEALRYCHSR-RIIHRDLKPQNILIN-----------------KSGA--------- 203
+ Q+L+ L Y H++ RIIH D+KP+NIL++ +SGA
Sbjct: 152 IQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVS 211
Query: 204 -----------------------LKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 240
+K+AD G + +T ++ T YR E+L+G+
Sbjct: 212 TAPATAGNFLVNPLEPKNAEKLKVKIADLGNA---CWVHKHFTEDIQTRQYRSLEVLIGS 268
Query: 241 KVYSTTVDIWSAGCIFSEMITKKTLF 266
Y+T DIWS C+ E+ T LF
Sbjct: 269 G-YNTPADIWSTACMAFELATGDYLF 293
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 100/230 (43%), Gaps = 78/230 (33%)
Query: 14 VEGVPSTALREISVLKELKH-----PN---VIRLHDVIPVDFKL--------FLVFEFLR 57
E TAL EI +LK +++ PN V++L D DFK+ +VFE L
Sbjct: 57 AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLD----DFKISGVNGTHICMVFEVLG 112
Query: 58 QDL-KDFLQTTPVPVPPALAKSYLYQLLEALRYCHSR-RIIHRDLKPQNILIN------- 108
L K +++ +P K + Q+L+ L Y H++ RIIH D+KP+NIL++
Sbjct: 113 HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIR 172
Query: 109 ----------KSGA--------------------------------LKLADFGLSRAFTI 126
+SGA +K+AD G +
Sbjct: 173 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNA---CW 229
Query: 127 PMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMS---YLYQ 173
+T ++ T YR E+L+G+ Y+T DIWS C+ E++ YL++
Sbjct: 230 VHKHFTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFE 278
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 54/146 (36%)
Query: 171 LYQLLEALRYCHSR-RIIHRDLKPQNILIN-----------------KSGA--------- 203
+ Q+L+ L Y H++ RIIH D+KP+NIL++ +SGA
Sbjct: 136 IQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVS 195
Query: 204 -----------------------LKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEILLGA 240
+K+AD G + +T ++ T YR E+L+G+
Sbjct: 196 TAPATAGNFLVNPLEPKNAEKLKVKIADLGNA---CWVHKHFTEDIQTRQYRSLEVLIGS 252
Query: 241 KVYSTTVDIWSAGCIFSEMITKKTLF 266
Y+T DIWS C+ E+ T LF
Sbjct: 253 G-YNTPADIWSTACMAFELATGDYLF 277
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
L E +V+++L +P ++R+ + + LV E L +LQ V +
Sbjct: 60 LAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELV 117
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWP 177
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSE 167
+ PE + K +S+ D+WS G + E
Sbjct: 178 VKWYAPECINYYK-FSSKSDVWSFGVLMWE 206
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
++Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW 176
Query: 231 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT---KKTLFAGDSEIDQLFRIFRTLGT 284
+ PE + K +S+ D+WS G + E + K SE+ + +G
Sbjct: 177 PVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC 235
Query: 285 P 285
P
Sbjct: 236 P 236
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
L E +V+++L +P ++R+ + + LV E L +LQ V +
Sbjct: 54 LAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELV 111
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 112 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 171
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSE 167
+ PE + K +S+ D+WS G + E
Sbjct: 172 VKWYAPECINYYK-FSSKSDVWSFGVLMWE 200
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
++Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 111 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 170
Query: 231 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT---KKTLFAGDSEIDQLFRIFRTLGT 284
+ PE + K +S+ D+WS G + E + K SE+ + +G
Sbjct: 171 PVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC 229
Query: 285 P 285
P
Sbjct: 230 P 230
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 7/143 (4%)
Query: 32 KHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLEALR-- 88
+HP+++ L ++ L+++++ +LK L + +P + L + A R
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 89 -YCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV--TLWYRPPEI 145
Y H+R IIHRD+K NIL++++ K+ DFG+S+ T + VV TL Y PE
Sbjct: 153 HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEY 212
Query: 146 LLGAKVYSTTVDIWSAGCIFSEM 168
+ ++ + D++S G + E+
Sbjct: 213 FIKGRLTEKS-DVYSFGVVLFEV 234
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 177 ALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV--TLWYRPP 234
L Y H+R IIHRD+K NIL++++ K+ DFG+S+ T + VV TL Y P
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDP 210
Query: 235 EILLGAKVYSTTVDIWSAGCIFSEMITKKT 264
E + ++ + D++S G + E++ ++
Sbjct: 211 EYFIKGRLTEKS-DVYSFGVVLFEVLCARS 239
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 38/173 (21%)
Query: 22 LREISVLKELKHPNVIRLHDV--------IPVDFKLFLVFEFLR-QDLKDFL-----QTT 67
L E + +K+ HPNVIRL V IP K ++ F++ DL +L +T
Sbjct: 84 LSEAACMKDFSHPNVIRLLGVCIEMSSQGIP---KPMVILPFMKYGDLHTYLLYSRLETG 140
Query: 68 PVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIP 127
P +P ++ + + Y +R +HRDL +N ++ + +ADFGLS+
Sbjct: 141 PKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKI--- 197
Query: 128 MNRYTHEVVTLWYRPPEIL-----------LGAKVYSTTVDIWSAGCIFSEMS 169
Y+ + +YR I L +VY++ D+W+ G E++
Sbjct: 198 ---YSGD----YYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIA 243
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 21/106 (19%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV 227
+ ++ + + Y +R +HRDL +N ++ + +ADFGLS+ Y+ +
Sbjct: 150 LKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKI------YSGD-- 201
Query: 228 TLWYRPPEIL-----------LGAKVYSTTVDIWSAGCIFSEMITK 262
+YR I L +VY++ D+W+ G E+ T+
Sbjct: 202 --YYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR 245
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
L E +V+++L +P ++R+ + + LV E L +LQ V +
Sbjct: 60 LAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELV 117
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 177
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSE 167
+ PE + K +S+ D+WS G + E
Sbjct: 178 VKWYAPECINYYK-FSSKSDVWSFGVLMWE 206
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
++Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 176
Query: 231 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT---KKTLFAGDSEIDQLFRIFRTLGT 284
+ PE + K +S+ D+WS G + E + K SE+ + +G
Sbjct: 177 PVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC 235
Query: 285 P 285
P
Sbjct: 236 P 236
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
L E +V+++L +P ++R+ + + LV E L +LQ V +
Sbjct: 56 LAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELV 113
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 114 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 173
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSE 167
+ PE + K +S+ D+WS G + E
Sbjct: 174 VKWYAPECINYYK-FSSKSDVWSFGVLMWE 202
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
++Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 113 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 172
Query: 231 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT---KKTLFAGDSEIDQLFRIFRTLGT 284
+ PE + K +S+ D+WS G + E + K SE+ + +G
Sbjct: 173 PVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC 231
Query: 285 P 285
P
Sbjct: 232 P 232
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
L E +V+++L +P ++R+ + + LV E L +LQ V +
Sbjct: 76 LAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELV 133
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSE 167
+ PE + K +S+ D+WS G + E
Sbjct: 194 VKWYAPECINYYK-FSSKSDVWSFGVLMWE 222
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
++Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 231 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT---KKTLFAGDSEIDQLFRIFRTLGT 284
+ PE + K +S+ D+WS G + E + K SE+ + +G
Sbjct: 193 PVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC 251
Query: 285 P 285
P
Sbjct: 252 P 252
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
L E +V+++L +P ++R+ + + LV E L +LQ V +
Sbjct: 76 LAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELV 133
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSE 167
+ PE + K +S+ D+WS G + E
Sbjct: 194 VKWYAPECINYYK-FSSKSDVWSFGVLMWE 222
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
++Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 231 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT---KKTLFAGDSEIDQLFRIFRTLGT 284
+ PE + K +S+ D+WS G + E + K SE+ + +G
Sbjct: 193 PVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC 251
Query: 285 P 285
P
Sbjct: 252 P 252
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
L E +V+++L +P ++R+ + + LV E L +LQ V +
Sbjct: 66 LAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELV 123
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 124 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 183
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSE 167
+ PE + K +S+ D+WS G + E
Sbjct: 184 VKWYAPECINYYK-FSSKSDVWSFGVLMWE 212
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
++Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 123 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 182
Query: 231 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT---KKTLFAGDSEIDQLFRIFRTLGT 284
+ PE + K +S+ D+WS G + E + K SE+ + +G
Sbjct: 183 PVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC 241
Query: 285 P 285
P
Sbjct: 242 P 242
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
L E +V+++L +P ++R+ + + LV E L +LQ V +
Sbjct: 74 LAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELV 131
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 132 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 191
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSE 167
+ PE + K +S+ D+WS G + E
Sbjct: 192 VKWYAPECINYYK-FSSKSDVWSFGVLMWE 220
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
++Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 131 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 190
Query: 231 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT---KKTLFAGDSEIDQLFRIFRTLGT 284
+ PE + K +S+ D+WS G + E + K SE+ + +G
Sbjct: 191 PVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC 249
Query: 285 P 285
P
Sbjct: 250 P 250
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 229
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 230 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQ-LFRIFRTLGTP 285
W P I + K YS D+++ G + E++T + ++ + DQ +F + R +P
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 229
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 138
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 139 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEM 168
W P I + K YS D+++ G + E+
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 229
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 230 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQ-LFRIFRTLGTP 285
W P I + K YS D+++ G + E++T + ++ + DQ +F + R +P
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 234
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 138
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 139 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEM 168
W P I + K YS D+++ G + E+
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 207
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHE 225
+ Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ L + PE + +VY+ D+WS G + E+ +
Sbjct: 211 RLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 245
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHEV 135
Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 136 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ L + PE + +VY+ D+WS G + E+
Sbjct: 212 LPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEI 243
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 229
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 230 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQ-LFRIFRTLGTP 285
W P I + K YS D+++ G + E++T + ++ + DQ +F + R +P
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 234
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 138
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 139 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEM 168
W P I + K YS D+++ G + E+
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 207
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 229
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 114 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 173
Query: 230 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQ-LFRIFRTLGTP 285
W P I + K YS D+++ G + E++T + ++ + DQ +F + R +P
Sbjct: 174 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 231
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 138
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 114 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 173
Query: 139 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEM 168
W P I + K YS D+++ G + E+
Sbjct: 174 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 204
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 229
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 230 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQ-LFRIFRTLGTP 285
W P I + K YS D+++ G + E++T + ++ + DQ +F + R +P
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 229
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 138
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 139 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEM 168
W P I + K YS D+++ G + E+
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 7/143 (4%)
Query: 32 KHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFLQTTPVPVPPALAKSYLYQLLEALR-- 88
+HP+++ L ++ L+++++ +LK L + +P + L + A R
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 89 -YCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV--TLWYRPPEI 145
Y H+R IIHRD+K NIL++++ K+ DFG+S+ T + VV TL Y PE
Sbjct: 153 HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEY 212
Query: 146 LLGAKVYSTTVDIWSAGCIFSEM 168
+ ++ + D++S G + E+
Sbjct: 213 FIKGRLTEKS-DVYSFGVVLFEV 234
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 177 ALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVV--TLWYRPP 234
L Y H+R IIHRD+K NIL++++ K+ DFG+S+ T + VV TL Y P
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDP 210
Query: 235 EILLGAKVYSTTVDIWSAGCIFSEMITKKT 264
E + ++ + D++S G + E++ ++
Sbjct: 211 EYFIKGRLTEKS-DVYSFGVVLFEVLCARS 239
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHE 225
+ Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ L + PE + +VY+ D+WS G + E+ +
Sbjct: 211 RLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 245
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 49 LFLVFEFLR-QDLKDFLQT-----TPVPVPPALAKSYL---------YQLLEALRYCHSR 93
L ++ EF + +L +L++ P P L K +L +Q+ + + + SR
Sbjct: 108 LMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASR 167
Query: 94 RIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHEVVTLWYRPPEILLGAKV 151
+ IHRDL +NIL+++ +K+ DFGL+R + R + L + PE + +V
Sbjct: 168 KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFD-RV 226
Query: 152 YSTTVDIWSAGCIFSEM 168
Y+ D+WS G + E+
Sbjct: 227 YTIQSDVWSFGVLLWEI 243
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 229
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 139 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 198
Query: 230 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQ-LFRIFRTLGTP 285
W P I + K YS D+++ G + E++T + ++ + DQ +F + R +P
Sbjct: 199 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 256
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 138
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 139 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 198
Query: 139 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEM 168
W P I + K YS D+++ G + E+
Sbjct: 199 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 229
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 229
Q + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 116 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 175
Query: 230 WYRPPEI-LLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
W P I + + YS D+++ G + E++T + ++ + DQ+ +
Sbjct: 176 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 225
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 138
Q + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 116 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 175
Query: 139 WYRPPEI-LLGAKVYSTTVDIWSAGCIFSEM 168
W P I + + YS D+++ G + E+
Sbjct: 176 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYEL 206
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHE 225
+ Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ L + PE + +VY+ D+WS G + E+ +
Sbjct: 202 RLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 236
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHEVV 136
Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
L + PE + +VY+ D+WS G + E+
Sbjct: 204 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEI 234
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 229
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 199
Query: 230 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQ-LFRIFRTLGTP 285
W P I + K YS D+++ G + E++T + ++ + DQ +F + R +P
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 257
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 138
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 199
Query: 139 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEM 168
W P I + K YS D+++ G + E+
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 230
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHE 225
+ Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 201 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ L + PE + +VY+ D+WS G + E+ +
Sbjct: 261 RLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHEVV 136
Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R +
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
L + PE + +VY+ D+WS G + E+
Sbjct: 263 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEI 293
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 229
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 171
Query: 230 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQ-LFRIFRTLGTP 285
W P I + K YS D+++ G + E++T + ++ + DQ +F + R +P
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 229
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 138
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 171
Query: 139 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEM 168
W P I + K YS D+++ G + E+
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHE 225
+ Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ L + PE + +VY+ D+WS G + E+ +
Sbjct: 202 RLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 236
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHEVV 136
Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
L + PE + +VY+ D+WS G + E+
Sbjct: 204 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEI 234
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 225
+++ Q+ E + Y RR++HRDL +N+L+ +K+ DFGL++ Y E
Sbjct: 117 LNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 176
Query: 226 -VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V W IL ++Y+ D+WS G E++T
Sbjct: 177 KVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 211
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 5/150 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E V+ + +P+V RL + + L D+++ + ++
Sbjct: 62 LDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 121
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---VVTL 138
Q+ E + Y RR++HRDL +N+L+ +K+ DFGL++ Y E V
Sbjct: 122 QIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 181
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W IL ++Y+ D+WS G E+
Sbjct: 182 WMALESIL--HRIYTHQSDVWSYGVTVWEL 209
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 185 RIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEIL---LGAK 241
+IIHRD+KP NIL+++SG +KL DFG+S + + T + Y PE + +
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK-TRDAGCRPYMAPERIDPSASRQ 204
Query: 242 VYSTTVDIWSAGCIFSEMITKKTLFAG-DSEIDQLFRIFR 280
Y D+WS G E+ T + + +S DQL ++ +
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK 244
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 94 RIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEIL---LGAK 150
+IIHRD+KP NIL+++SG +KL DFG+S + + T + Y PE + +
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK-TRDAGCRPYMAPERIDPSASRQ 204
Query: 151 VYSTTVDIWSAGCIFSEMS 169
Y D+WS G E++
Sbjct: 205 GYDVRSDVWSLGITLYELA 223
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHE 225
+ Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 151 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ L + PE + +VY+ D+WS G + E+ +
Sbjct: 211 RLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 245
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHEVV 136
Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R +
Sbjct: 153 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
L + PE + +VY+ D+WS G + E+
Sbjct: 213 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEI 243
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHE 225
+ Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 203 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ L + PE + +VY+ D+WS G + E+ +
Sbjct: 263 RLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 297
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHEVV 136
Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R +
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
L + PE + +VY+ D+WS G + E+
Sbjct: 265 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEI 295
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 229
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 132 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 191
Query: 230 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQ-LFRIFRTLGTP 285
W P I + K YS D+++ G + E++T + ++ + DQ +F + R +P
Sbjct: 192 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 249
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 138
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 132 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 191
Query: 139 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEM 168
W P I + K YS D+++ G + E+
Sbjct: 192 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 222
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 229
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 199
Query: 230 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQ-LFRIFRTLGTP 285
W P I + K YS D+++ G + E++T + ++ + DQ +F + R +P
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 257
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 138
Q + + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 199
Query: 139 WYRPPEILLGAKV-YSTTVDIWSAGCIFSEM 168
W P I + K YS D+++ G + E+
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 230
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 229
Q + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 230 WYRPPEI-LLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
W P I + + YS D+++ G + E++T + ++ + DQ+ +
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 138
Q + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 139 WYRPPEI-LLGAKVYSTTVDIWSAGCIFSEM 168
W P I + + YS D+++ G + E+
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYEL 218
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 81/149 (54%), Gaps = 18/149 (12%)
Query: 28 LKELKHPNVIRLHDVIP-----VDFKLFLVFEFLR-QDLKDFLQTTPVPVPPALAKSYLY 81
L E+ HP+++++ + + D ++V E++ Q LK ++ +P A A +YL
Sbjct: 133 LAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK---RSKGQKLPVAEAIAYLL 189
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFG-LSRAFTIPMNRYTHEVVTLWY 140
++L AL Y HS +++ DLKP+NI++ + LKL D G +SR +N + + T +
Sbjct: 190 EILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSR-----INSFGYLYGTPGF 243
Query: 141 RPPEILLGAKVYSTTVDIWSAGCIFSEMS 169
+ PEI+ +T DI++ G + ++
Sbjct: 244 QAPEIVRTGPTVAT--DIYTVGRTLAALT 270
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 164 IFSEMSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFG-LSRAFTIPMNRY 222
+ ++YL ++L AL Y HS +++ DLKP+NI++ + LKL D G +SR +N +
Sbjct: 181 VAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSR-----INSF 234
Query: 223 THEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 259
+ T ++ PEI+ +T DI++ G + +
Sbjct: 235 GYLYGTPGFQAPEIVRTGPTVAT--DIYTVGRTLAAL 269
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHE 225
+ Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 196 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ L + PE + +VY+ D+WS G + E+ +
Sbjct: 256 RLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 290
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHEVV 136
Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R +
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
L + PE + +VY+ D+WS G + E+
Sbjct: 258 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEI 288
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 229
Q + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 230 WYRPPEI-LLGAKVYSTTVDIWSAGCIFSEMITKKTLFAGDSEIDQLFRI 278
W P I + + YS D+++ G + E++T + ++ + DQ+ +
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVT---L 138
Q + Y H++ IIHRDLK NI +++ +K+ DFGL+ + + E ++ L
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 139 WYRPPEI-LLGAKVYSTTVDIWSAGCIFSEM 168
W P I + + YS D+++ G + E+
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYEL 218
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
L E +V+++L +P ++R+ + + LV E L +LQ V +
Sbjct: 419 LAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELV 476
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 477 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 536
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSE 167
+ PE + K +S+ D+WS G + E
Sbjct: 537 VKWYAPECINYYK-FSSKSDVWSFGVLMWE 565
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
++Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 476 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 535
Query: 231 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT---KKTLFAGDSEIDQLFRIFRTLGT 284
+ PE + K +S+ D+WS G + E + K SE+ + +G
Sbjct: 536 PVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC 594
Query: 285 P 285
P
Sbjct: 595 P 595
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHE 225
+ Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ L + PE + +VY+ D+WS G + E+ +
Sbjct: 211 RLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 245
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHEV 135
Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 136 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ L + PE + +VY+ D+WS G + E+
Sbjct: 212 LPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEI 243
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHE 225
+ Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 194 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ L + PE + +VY+ D+WS G + E+ +
Sbjct: 254 RLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 288
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHEVV 136
Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R +
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
L + PE + +VY+ D+WS G + E+
Sbjct: 256 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEI 286
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQD-LKDFLQTTPVPVPPALAKSYL 80
L E +V+++L +P ++R+ + + LV E L +LQ V +
Sbjct: 418 LAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELV 475
Query: 81 YQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW- 139
+Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 476 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 535
Query: 140 --YRPPEILLGAKVYSTTVDIWSAGCIFSE 167
+ PE + K +S+ D+WS G + E
Sbjct: 536 VKWYAPECINYYK-FSSKSDVWSFGVLMWE 564
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 171 LYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLW 230
++Q+ ++Y +HRDL +N+L+ K++DFGLS+A N Y + W
Sbjct: 475 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 534
Query: 231 ---YRPPEILLGAKVYSTTVDIWSAGCIFSEMIT---KKTLFAGDSEIDQLFRIFRTLGT 284
+ PE + K +S+ D+WS G + E + K SE+ + +G
Sbjct: 535 PVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC 593
Query: 285 P 285
P
Sbjct: 594 P 594
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHE 225
+ Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ L + PE + +VY+ D+WS G + E+ +
Sbjct: 211 RLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 245
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHEV 135
Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 136 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ L + PE + +VY+ D+WS G + E+
Sbjct: 212 LPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEI 243
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHE 225
+ Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 153 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ L + PE + +VY+ D+WS G + E+ +
Sbjct: 213 RLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 247
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHEV 135
Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 154 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 136 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ L + PE + +VY+ D+WS G + E+
Sbjct: 214 LPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEI 245
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHE 225
+ Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ L + PE + +VY+ D+WS G + E+ +
Sbjct: 202 RLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 236
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHEV 135
Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 136 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ L + PE + +VY+ D+WS G + E+
Sbjct: 203 LPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEI 234
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHE 225
+ Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ L + PE + +VY+ D+WS G + E+ +
Sbjct: 202 RLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 236
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHEVV 136
Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
L + PE + +VY+ D+WS G + E+
Sbjct: 204 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEI 234
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHE 225
+ Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 188 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ L + PE + +VY+ D+WS G + E+ +
Sbjct: 248 RLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 282
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 78 SYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHEV 135
Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 189 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 136 VTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ L + PE + +VY+ D+WS G + E+
Sbjct: 249 LPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEI 280
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 4/147 (2%)
Query: 27 VLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLYQLLEA 86
VLK P +++ + +F+ E + + + P+P + +++A
Sbjct: 77 VLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKA 136
Query: 87 LRYCHSRR-IIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYRPPEI 145
L Y + +IHRD+KP NIL+++ G +KL DFG+S + + P I
Sbjct: 137 LYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERI 196
Query: 146 LLGAKV---YSTTVDIWSAGCIFSEMS 169
Y D+WS G E++
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVELA 223
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 174 LLEALRYCHSRR-IIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTLWYR 232
+++AL Y + +IHRD+KP NIL+++ G +KL DFG+S + +
Sbjct: 133 IVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMA 192
Query: 233 PPEILLGAKV---YSTTVDIWSAGCIFSEMITKK 263
P I Y D+WS G E+ T +
Sbjct: 193 PERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 24/177 (13%)
Query: 13 QVEGVPSTALREISVLK-ELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFL------ 64
+ EG R ++L+ L+HPNV+ L V+ D L ++F + DL +FL
Sbjct: 50 KAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPH 109
Query: 65 ---------QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKL 115
+T + P + Q+ + Y S ++H+DL +N+L+ +K+
Sbjct: 110 SDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKI 169
Query: 116 ADFGLSRAFTIPMNRYTHEVVTL----WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+D GL R + Y +L W P I+ G +S DIWS G + E+
Sbjct: 170 SDLGLFRE-VYAADYYKLLGNSLLPIRWMAPEAIMYGK--FSIDSDIWSYGVVLWEV 223
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 12/145 (8%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL--- 229
Q+ + Y S ++H+DL +N+L+ +K++D GL R + Y +L
Sbjct: 136 QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE-VYAADYYKLLGNSLLPI 194
Query: 230 -WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL-FAGDSEID--QLFRIFRTLGTP 285
W P I+ G +S DIWS G + E+ + + G S D ++ R + L P
Sbjct: 195 RWMAPEAIMYGK--FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCP 252
Query: 286 HEDVWPGVSKLPIYK-TDFPEWRPK 309
+D V L I +FP RP+
Sbjct: 253 -DDCPAWVYALMIECWNEFPSRRPR 276
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHE 225
+ Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 147 ICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ L + PE + +VY+ D+WS G + E+ +
Sbjct: 207 RLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 241
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHEVV 136
Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R +
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
L + PE + +VY+ D+WS G + E+
Sbjct: 209 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEI 239
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 24/177 (13%)
Query: 13 QVEGVPSTALREISVLK-ELKHPNVIRLHDVIPVDFKLFLVFEFLRQ-DLKDFL------ 64
+ EG R ++L+ L+HPNV+ L V+ D L ++F + DL +FL
Sbjct: 67 KAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPH 126
Query: 65 ---------QTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKL 115
+T + P + Q+ + Y S ++H+DL +N+L+ +K+
Sbjct: 127 SDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKI 186
Query: 116 ADFGLSRAFTIPMNRYTHEVVTL----WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+D GL R + Y +L W P I+ G +S DIWS G + E+
Sbjct: 187 SDLGLFRE-VYAADYYKLLGNSLLPIRWMAPEAIMYGK--FSIDSDIWSYGVVLWEV 240
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 12/145 (8%)
Query: 173 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHEVVTL--- 229
Q+ + Y S ++H+DL +N+L+ +K++D GL R + Y +L
Sbjct: 153 QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE-VYAADYYKLLGNSLLPI 211
Query: 230 -WYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKTL-FAGDSEID--QLFRIFRTLGTP 285
W P I+ G +S DIWS G + E+ + + G S D ++ R + L P
Sbjct: 212 RWMAPEAIMYGK--FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCP 269
Query: 286 HEDVWPGVSKLPIYK-TDFPEWRPK 309
+D V L I +FP RP+
Sbjct: 270 -DDCPAWVYALMIECWNEFPSRRPR 293
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHE 225
+ Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R
Sbjct: 147 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 226 VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
+ L + PE + +VY+ D+WS G + E+ +
Sbjct: 207 RLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 241
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 79 YLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMN--RYTHEVV 136
Y +Q+ + + + SR+ IHRDL +NIL+++ +K+ DFGL+R + R +
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 137 TLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
L + PE + +VY+ D+WS G + E+
Sbjct: 209 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEI 239
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 6 SRPRSRVQVEGVPSTALREISVLKELKHPNVIRLHDVI--PVDFKLFLVFEFLRQDLKDF 63
SR QVE LRE +++ L HPNV+ L ++ P L+ DL F
Sbjct: 58 SRITEMQQVEAF----LREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQF 113
Query: 64 LQTTPVPVPPALAKSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRA 123
+++ S+ Q+ + Y ++ +HRDL +N ++++S +K+ADFGL+R
Sbjct: 114 IRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARD 173
Query: 124 FT----IPMNRYTHEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
+ ++ H + + + E L + ++T D+WS G + E+
Sbjct: 174 ILDREYYSVQQHRHARLPVKWTALESLQTYR-FTTKSDVWSFGVLLWEL 221
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFT----IPMNRYT 223
+S+ Q+ + Y ++ +HRDL +N ++++S +K+ADFGL+R + ++
Sbjct: 127 ISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHR 186
Query: 224 HEVVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMITKKT 264
H + + + E L + ++T D+WS G + E++T+
Sbjct: 187 HARLPVKWTALESLQTYR-FTTKSDVWSFGVLLWELLTRGA 226
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 225
+++ Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E
Sbjct: 130 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 226 -VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V W IL ++Y+ D+WS G E++T
Sbjct: 190 KVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 224
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 5/150 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E V+ + +P+V RL + + L D+++ + ++
Sbjct: 75 LDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 134
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---VVTL 138
Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E V
Sbjct: 135 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 194
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W IL ++Y+ D+WS G E+
Sbjct: 195 WMALESIL--HRIYTHQSDVWSYGVTVWEL 222
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 225
+++ Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E
Sbjct: 120 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 226 -VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V W IL ++Y+ D+WS G E++T
Sbjct: 180 KVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 214
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 5/150 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E V+ + +P+V RL + + L D+++ + ++
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCV 124
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---VVTL 138
Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E V
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W IL ++Y+ D+WS G E+
Sbjct: 185 WMALESIL--HRIYTHQSDVWSYGVTVWEL 212
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 225
+++ Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E
Sbjct: 145 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 204
Query: 226 -VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V W IL ++Y+ D+WS G E++T
Sbjct: 205 KVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 239
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 5/150 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E V+ + +P+V RL + + L D+++ + ++
Sbjct: 90 LDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 149
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---VVTL 138
Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E V
Sbjct: 150 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 209
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W IL ++Y+ D+WS G E+
Sbjct: 210 WMALESIL--HRIYTHQSDVWSYGVTVWEL 237
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 225
+++ Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E
Sbjct: 122 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 226 -VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V W IL ++Y+ D+WS G E++T
Sbjct: 182 KVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 216
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 5/150 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E V+ + +P+V RL + ++ L D+++ + ++
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---VVTL 138
Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E V
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W IL ++Y+ D+WS G E+
Sbjct: 187 WMALESIL--HRIYTHQSDVWSYGVTVWEL 214
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 225
+++ Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E
Sbjct: 120 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 226 -VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V W IL ++Y+ D+WS G E++T
Sbjct: 180 KVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 214
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 5/150 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E V+ + +P+V RL + + L D+++ + ++
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---VVTL 138
Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E V
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W IL ++Y+ D+WS G E+
Sbjct: 185 WMALESIL--HRIYTHQSDVWSYGVTVWEL 212
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 225
+++ Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E
Sbjct: 124 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 183
Query: 226 -VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V W IL ++Y+ D+WS G E++T
Sbjct: 184 KVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 218
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 5/150 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E V+ + +P+V RL + ++ L D+++ + ++
Sbjct: 69 LDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 128
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---VVTL 138
Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E V
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 188
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W IL ++Y+ D+WS G E+
Sbjct: 189 WMALESIL--HRIYTHQSDVWSYGVTVWEL 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 225
+++ Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E
Sbjct: 121 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 226 -VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V W IL ++Y+ D+WS G E++T
Sbjct: 181 KVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 215
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 5/150 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E V+ + +P+V RL + ++ L D+++ + ++
Sbjct: 66 LDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCV 125
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---VVTL 138
Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E V
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W IL ++Y+ D+WS G E+
Sbjct: 186 WMALESIL--HRIYTHQSDVWSYGVTVWEL 213
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 225
+++ Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E
Sbjct: 121 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 226 -VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V W IL ++Y+ D+WS G E++T
Sbjct: 181 KVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 215
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 5/150 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E V+ + +P+V RL + ++ L D+++ + ++
Sbjct: 66 LDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 125
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---VVTL 138
Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E V
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W IL ++Y+ D+WS G E+
Sbjct: 186 WMALESIL--HRIYTHQSDVWSYGVTVWEL 213
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 225
+++ Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E
Sbjct: 120 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 226 -VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V W IL ++Y+ D+WS G E++T
Sbjct: 180 KVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 214
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 5/150 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E V+ + +P+V RL + + L D+++ + ++
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---VVTL 138
Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E V
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W IL ++Y+ D+WS G E+
Sbjct: 185 WMALESIL--HRIYTHQSDVWSYGVTVWEL 212
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 225
+++ Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E
Sbjct: 122 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 226 -VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V W IL ++Y+ D+WS G E++T
Sbjct: 182 KVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 216
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 5/150 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E V+ + +P+V RL + + L D+++ + ++
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---VVTL 138
Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E V
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W IL ++Y+ D+WS G E+
Sbjct: 187 WMALESIL--HRIYTHQSDVWSYGVTVWEL 214
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 225
+++ Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E
Sbjct: 120 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 226 -VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V W IL ++Y+ D+WS G E++T
Sbjct: 180 KVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 214
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 5/150 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E V+ + +P+V RL + ++ L D+++ + ++
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---VVTL 138
Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E V
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W IL ++Y+ D+WS G E+
Sbjct: 185 WMALESIL--HRIYTHQSDVWSYGVTVWEL 212
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 225
+++ Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E
Sbjct: 120 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 226 -VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V W IL ++Y+ D+WS G E++T
Sbjct: 180 KVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 214
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 5/150 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E V+ + +P+V RL + + L D+++ + ++
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---VVTL 138
Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E V
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W IL ++Y+ D+WS G E+
Sbjct: 185 WMALESIL--HRIYTHQSDVWSYGVTVWEL 212
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 225
+++ Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E
Sbjct: 123 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 226 -VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V W IL ++Y+ D+WS G E++T
Sbjct: 183 KVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 217
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 5/150 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E V+ + +P+V RL + + L D+++ + ++
Sbjct: 68 LDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---VVTL 138
Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E V
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W IL ++Y+ D+WS G E+
Sbjct: 188 WMALESIL--HRIYTHQSDVWSYGVTVWEL 215
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 168 MSYLYQLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE-- 225
+++ Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E
Sbjct: 123 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 226 -VVTLWYRPPEILLGAKVYSTTVDIWSAGCIFSEMIT 261
V W IL ++Y+ D+WS G E++T
Sbjct: 183 KVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMT 217
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 5/150 (3%)
Query: 22 LREISVLKELKHPNVIRLHDVIPVDFKLFLVFEFLRQDLKDFLQTTPVPVPPALAKSYLY 81
L E V+ + +P+V RL + + L D+++ + ++
Sbjct: 68 LDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 82 QLLEALRYCHSRRIIHRDLKPQNILINKSGALKLADFGLSRAFTIPMNRYTHE---VVTL 138
Q+ + + Y RR++HRDL +N+L+ +K+ DFGL++ Y E V
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 139 WYRPPEILLGAKVYSTTVDIWSAGCIFSEM 168
W IL ++Y+ D+WS G E+
Sbjct: 188 WMALESIL--HRIYTHQSDVWSYGVTVWEL 215
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,867,200
Number of Sequences: 62578
Number of extensions: 712413
Number of successful extensions: 6096
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 1205
Number of HSP's gapped (non-prelim): 2579
length of query: 562
length of database: 14,973,337
effective HSP length: 104
effective length of query: 458
effective length of database: 8,465,225
effective search space: 3877073050
effective search space used: 3877073050
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)