BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy10956
         (582 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|156550592|ref|XP_001603998.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Nasonia
           vitripennis]
          Length = 582

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/523 (70%), Positives = 451/523 (86%)

Query: 60  DVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPS 119
           D KKTVTVKHPESNKPKPT KK +PIQADL++ KEF+RC++E    LDLSKSSIT+LP S
Sbjct: 60  DTKKTVTVKHPESNKPKPTAKKGKPIQADLDVAKEFIRCRDEGFKRLDLSKSSITNLPNS 119

Query: 120 VEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRH 179
           V  LTHL E YLYGNKL +LP +IG + NL  L L+ENSLTSLPD+L NL+QL+VLDLRH
Sbjct: 120 VRDLTHLVEFYLYGNKLVTLPPEIGCLANLKTLALSENSLTSLPDTLENLKQLKVLDLRH 179

Query: 180 NKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELK 239
           NKLNE+P VVYKLTSL  L+LRFNR++ V  +I+ L+NL+MLS+R+NKI+ELP  +G+L 
Sbjct: 180 NKLNEIPDVVYKLTSLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIKELPAGIGKLT 239

Query: 240 NLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLES 299
           NLVT D++HNHLE LP EIGNC  L TLDLQHNEL++IP+ +GNL+++TRL L YNRL S
Sbjct: 240 NLVTFDVSHNHLEHLPAEIGNCDQLSTLDLQHNELLDIPETIGNLVSVTRLGLRYNRLSS 299

Query: 300 VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVY 359
           +P++L+ C  ++EF+VEG  +S LPDGLLSSL+++  ITLSRN FTAYPSGGP+QFT+VY
Sbjct: 300 IPKSLANCKLMDEFSVEGNQVSQLPDGLLSSLSNLKTITLSRNAFTAYPSGGPSQFTNVY 359

Query: 360 SINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS 419
           SIN EHN+IDKIPYGIFSRAKNL+K+NMK+N LT+LPLD GTW+ + ELNLGTNQ+ K+ 
Sbjct: 360 SINLEHNKIDKIPYGIFSRAKNLTKLNMKENQLTALPLDTGTWINMVELNLGTNQLVKIP 419

Query: 420 EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLIL 479
           +DIQ L NLE+L+LSNNLLK++P+SI +L KL+ LDLEENK+ESLPNEIGFL++LQ+LIL
Sbjct: 420 DDIQYLQNLEILILSNNLLKRIPASIASLSKLRVLDLEENKIESLPNEIGFLRDLQKLIL 479

Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
           QSNQ+ SLPRAIGHLTNL++LSVGENNL  +PEEIGTLENL  LY+NDN  L+N+PFELA
Sbjct: 480 QSNQVTSLPRAIGHLTNLTHLSVGENNLNYLPEEIGTLENLDCLYINDNANLHNLPFELA 539

Query: 540 LCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LC+NL IMS++NCPLSQIP EIV GGPSL+I++LKMQGPYR+M
Sbjct: 540 LCTNLSIMSIENCPLSQIPPEIVAGGPSLVIQFLKMQGPYRSM 582


>gi|91091582|ref|XP_968188.1| PREDICTED: similar to shoc2 [Tribolium castaneum]
 gi|270001034|gb|EEZ97481.1| hypothetical protein TcasGA2_TC011315 [Tribolium castaneum]
          Length = 565

 Score =  748 bits (1932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/559 (67%), Positives = 460/559 (82%), Gaps = 4/559 (0%)

Query: 28  SSTALLNSDSSRSDEYGYFEDMPEK--DNKKCGVDVK--KTVTVKHPESNKPKPTTKKKE 83
            +T L  S+   ++  G  E + +K   +   G D+   K VTVKHPESNKPKPT KK +
Sbjct: 7   GNTCLPESEMPEAESSGVLESVKQKKYSSGSLGGDITRPKVVTVKHPESNKPKPTAKKNK 66

Query: 84  PIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQI 143
           PIQADL++ KEFLRC++E +  LDLSKS+ITHLPP+V  L HL ELYLYGNKL  LP +I
Sbjct: 67  PIQADLDVSKEFLRCRDEGLKRLDLSKSNITHLPPTVRDLIHLSELYLYGNKLVYLPLEI 126

Query: 144 GYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFN 203
           G +TNL  L L+ENSLTSLPDSL +L+ L+VLDLRHNKLN++P VVYKLTSL  L+LRFN
Sbjct: 127 GCLTNLQTLALSENSLTSLPDSLMSLKSLKVLDLRHNKLNDIPDVVYKLTSLTTLFLRFN 186

Query: 204 RIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTM 263
           RI+ V  +I++L++L+MLS+R+NKI+ELP  +G+L NLVT D++HNHLE LP+EIG C  
Sbjct: 187 RIRYVDDEIRFLTSLTMLSLRENKIKELPAGIGKLVNLVTFDVSHNHLEHLPEEIGQCIN 246

Query: 264 LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSL 323
           L TLDLQHNEL++IPD +G L  LTRL L YNRL  +P +LS C H++EFNVEG A+S L
Sbjct: 247 LSTLDLQHNELLDIPDTIGELQQLTRLGLRYNRLSFIPSSLSNCRHMDEFNVEGNAISQL 306

Query: 324 PDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
           P+GLLSSL+ + +ITLSRN F AYPSGGP+QFT+V SIN EHNQIDKIPYGIFSRAK+L+
Sbjct: 307 PEGLLSSLSELTSITLSRNNFAAYPSGGPSQFTNVDSINLEHNQIDKIPYGIFSRAKHLT 366

Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
           K+NMK+N LTSLPLD+GTW  + ELNLGTNQ+ KL +DIQ L  LEVLVLSNNLL+++P 
Sbjct: 367 KLNMKENQLTSLPLDVGTWTNMVELNLGTNQLGKLPDDIQALQALEVLVLSNNLLRRIPP 426

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
           S+GNLRKL+ LDLEEN+LE LPNEIG+L++LQRLI+QSNQL SLPRAIGHL NL +LSVG
Sbjct: 427 SVGNLRKLRVLDLEENRLEQLPNEIGYLRDLQRLIVQSNQLTSLPRAIGHLANLVFLSVG 486

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVV 563
           ENNL  +PEEIGTLENL +LY+NDN  L+N+PFELALCSNLQIMS++NCPLSQIP+EIV 
Sbjct: 487 ENNLAYLPEEIGTLENLESLYVNDNPSLHNLPFELALCSNLQIMSIENCPLSQIPAEIVA 546

Query: 564 GGPSLIIRYLKMQGPYRTM 582
           GGPSL+I+YLKMQGPYR M
Sbjct: 547 GGPSLVIQYLKMQGPYRAM 565


>gi|307178161|gb|EFN66969.1| Leucine-rich repeat protein SHOC-2 [Camponotus floridanus]
          Length = 624

 Score =  748 bits (1930), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/524 (70%), Positives = 459/524 (87%)

Query: 59  VDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPP 118
            D KKTV VKHPESNKPKPTTKK +PIQA+L++ KEF+RC+EE +  LDLSK+SIT+LP 
Sbjct: 101 ADTKKTVMVKHPESNKPKPTTKKGKPIQAELDVAKEFVRCREECVKRLDLSKASITNLPS 160

Query: 119 SVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLR 178
           SV +LTHL E Y+YGNKLA+LP +IG + NL  L L+ENSLTSLP++L NL+ LRVLDLR
Sbjct: 161 SVRELTHLREFYIYGNKLATLPPEIGCLANLETLALSENSLTSLPNTLENLKSLRVLDLR 220

Query: 179 HNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGEL 238
           HNKLNE+P VVYKLTSL  L+LRFNR+K V+ +I+YL+NL+MLS+R+NKI+ELP  +GEL
Sbjct: 221 HNKLNEIPDVVYKLTSLTTLFLRFNRVKYVNDNIRYLTNLTMLSLRENKIKELPAGVGEL 280

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
            NL+T D++HNHLE LP+EIGNC  L TLDLQHNEL++IPD +GNL++LTRL L YNRL 
Sbjct: 281 VNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGNLVSLTRLGLRYNRLS 340

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
           ++P++L+ C  ++EF+VEG  +S LPDGLLSSL+ +  ITLSRN FTAYPSGGP+QFT+V
Sbjct: 341 NIPKSLANCKMMDEFSVEGNQVSHLPDGLLSSLSDLTTITLSRNNFTAYPSGGPSQFTNV 400

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
           YSIN EHN+IDKIPY IFSRAKNL+K+NMK+N LT+LPLD+GTWV + ELNLGTNQ+ K+
Sbjct: 401 YSINLEHNKIDKIPYAIFSRAKNLTKLNMKENQLTALPLDIGTWVNMVELNLGTNQLMKI 460

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
            +DIQ L +LE+L+LSNNLLK++P++I NLRKL+ LDLEEN+++SLPNEIGFL+ELQ+LI
Sbjct: 461 PDDIQYLKSLEILILSNNLLKRIPATIANLRKLRVLDLEENRIDSLPNEIGFLRELQKLI 520

Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFEL 538
           LQSNQ+VSLPRAIGHLTNL+YLSVGENNL  +PEEIGTLENL +LY+NDN  L+N+PFEL
Sbjct: 521 LQSNQVVSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENLESLYINDNANLHNLPFEL 580

Query: 539 ALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           ALC+NL IMS++NCPLSQIP+EIV GGPSL+I++LKMQGPYR+M
Sbjct: 581 ALCTNLSIMSIENCPLSQIPAEIVAGGPSLVIQFLKMQGPYRSM 624


>gi|383865861|ref|XP_003708391.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Megachile
           rotundata]
          Length = 610

 Score =  745 bits (1924), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/552 (68%), Positives = 464/552 (84%), Gaps = 17/552 (3%)

Query: 48  DMPE-----KDNKK------------CGVDVKKTVTVKHPESNKPKPTTKKKEPIQADLN 90
           DMPE     +DNK+             G D KKTVTVKHPESNKPKPTTKK +PIQADL+
Sbjct: 59  DMPEDVDVLRDNKEQTKEKKLSSASIAGPDTKKTVTVKHPESNKPKPTTKKGKPIQADLD 118

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + KEF RCKEE +  LDLSKSSIT+LP +V  LTHL E YLYGNKL +LP +IG + NL 
Sbjct: 119 VSKEFTRCKEECVTRLDLSKSSITNLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLANLE 178

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L+ENSLTSLP++L NL+ LRVLDLRHNKL+E+P VVYKLTSL  L+LRFNR++ V  
Sbjct: 179 TLALSENSLTSLPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTSLTTLFLRFNRVRYVSD 238

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           +I+ L+NL+MLS+R+NKI+ELP  +G+L NL+T D++HNHLE LP+EIGNC  L TLDLQ
Sbjct: 239 NIRNLTNLTMLSLRENKIKELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQ 298

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HNEL++IPD +GNLI+LTRL L YNRL ++P++L+ C  ++EF+VEG  +S LPDGLL+S
Sbjct: 299 HNELLDIPDTIGNLISLTRLGLRYNRLSNIPKSLANCKLMDEFSVEGNQVSQLPDGLLAS 358

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           L+ +  ITLSRN FTAYPSGGP QFT+VYSIN EHN+IDKIPYGIFSRAKNL+K+NMK+N
Sbjct: 359 LSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLTKLNMKEN 418

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            LT+LPLD+GTWV + ELNLGTNQ++K+ +DIQ L +LE+L+LSNNLLK++P+SI NLRK
Sbjct: 419 QLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQSLEILILSNNLLKRIPASIANLRK 478

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L+ LDLEENK+ESLPNEIGFL++LQ+LILQSNQ+ SLPRAIGHLTNL+YLSVGENNL  +
Sbjct: 479 LRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYL 538

Query: 511 PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLII 570
           PEEIGTLENL +LY+NDN  L+N+PFELALC+NL IMS++NCPLSQIP EIV GGPSL+I
Sbjct: 539 PEEIGTLENLDSLYVNDNANLHNLPFELALCTNLSIMSIENCPLSQIPPEIVAGGPSLVI 598

Query: 571 RYLKMQGPYRTM 582
           ++LKMQGPYR+M
Sbjct: 599 QFLKMQGPYRSM 610


>gi|340712839|ref|XP_003394961.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Bombus
           terrestris]
          Length = 610

 Score =  744 bits (1921), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/552 (68%), Positives = 462/552 (83%), Gaps = 17/552 (3%)

Query: 48  DMPE-----KDNKK------------CGVDVKKTVTVKHPESNKPKPTTKKKEPIQADLN 90
           DMPE     +DNK+             G D KKTVTVKHPESNKPKPTTKK +PIQADL+
Sbjct: 59  DMPEDVDVLRDNKEQTKEKKLSSASIAGPDTKKTVTVKHPESNKPKPTTKKGKPIQADLD 118

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + KEF RCKEE +  LDLSKS+ITHLP +V  LTHL E YLYGNKL +LP +IG + NL 
Sbjct: 119 VSKEFTRCKEECLERLDLSKSNITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLGNLE 178

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L+ENSLTSLP++L NL+ LRVLDLRHNKL+E+P VVYKLT+L  L+LRFNR++ V  
Sbjct: 179 TLALSENSLTSLPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSD 238

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           +I+ L+NL+MLS+R+NKIRELP  +G+L NL+T D++HNHLE LP+EIGNC  L TLDLQ
Sbjct: 239 NIRNLTNLTMLSLRENKIRELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQ 298

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HNEL++IPD +G L+ LTRL L YNRL S+P++L+ C  ++EF+VEG  +S LPDGLL+S
Sbjct: 299 HNELLDIPDTIGRLVLLTRLGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGLLAS 358

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           L+ +  ITLSRN FTAYPSGGP QFT+VYSIN EHN+IDKIPYGIFSRAKNL+K+NMK+N
Sbjct: 359 LSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKEN 418

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            LT+LPLD+GTWV + ELNLGTNQ++K+ +DIQ L NLEVL+LSNNLLK++P+SI NLRK
Sbjct: 419 QLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRK 478

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L+ LDLEENK+ESLPNEIGFL++LQ+LILQSNQ+ SLPRAIGHLTNL+YLSVGENNL  +
Sbjct: 479 LRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYL 538

Query: 511 PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLII 570
           PEEIGTLENL +LY+NDN  L+N+PFELALC+NL IMS++NCPLSQIP EIV GGPSL+I
Sbjct: 539 PEEIGTLENLDSLYVNDNANLHNLPFELALCTNLSIMSIENCPLSQIPPEIVAGGPSLVI 598

Query: 571 RYLKMQGPYRTM 582
           ++LKMQGPYR+M
Sbjct: 599 QFLKMQGPYRSM 610


>gi|380011078|ref|XP_003689640.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Apis florea]
          Length = 610

 Score =  743 bits (1919), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/552 (68%), Positives = 463/552 (83%), Gaps = 17/552 (3%)

Query: 48  DMPE-----KDNKK------------CGVDVKKTVTVKHPESNKPKPTTKKKEPIQADLN 90
           DMPE     +DNK              G D KKTVTVKHPESNKPKPTTKK +PIQADL+
Sbjct: 59  DMPEDVDVLRDNKDHTKEKKLSSASIAGPDTKKTVTVKHPESNKPKPTTKKGKPIQADLD 118

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + KEF RC+EE +  LDLSKS+ITHLP +V  LTHL E YLYGNKL +LP +IG + NL 
Sbjct: 119 VSKEFTRCREECLERLDLSKSNITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLGNLE 178

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L+ENSLTSLP++L NL+ LRVLDLRHNKL+E+P VVYKLT+L  L+LRFNR++ V  
Sbjct: 179 TLALSENSLTSLPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSD 238

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           +I+ L+NL+MLS+R+NKIRELP  +G+L NL+T D++HNHLE LP+EIGNC  L TLDLQ
Sbjct: 239 NIRNLTNLTMLSLRENKIRELPAGIGKLINLITFDVSHNHLEHLPEEIGNCVQLSTLDLQ 298

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HNEL++IPD +GNLI+LTRL L YNRL ++P++L+ C  ++EF+VEG  +S LPDGLL+S
Sbjct: 299 HNELLDIPDTIGNLISLTRLGLRYNRLTNIPKSLANCKLMDEFSVEGNQVSQLPDGLLAS 358

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           L+ +  ITLSRN FTAYPSGGP QFT+VYSIN EHN+IDKIPYGIFSRAKNL+K+NMK+N
Sbjct: 359 LSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKEN 418

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            LT+LPLD+GTW+ + ELNLGTNQ++K+ +DIQ L NLEVL+LSNNLLK++P+SI NLRK
Sbjct: 419 QLTALPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRK 478

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L+ LDLEENK+ESLPNEIGFL++LQ+LILQSNQ+ SLPRAIGHLTNL+YLSVGENNL  +
Sbjct: 479 LRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYL 538

Query: 511 PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLII 570
           PEEIGTLENL +LY+NDN  L+N+PFELALC+NL IMS++NCPLSQIP EIV GGPSL+I
Sbjct: 539 PEEIGTLENLDSLYVNDNANLHNLPFELALCTNLSIMSIENCPLSQIPPEIVAGGPSLVI 598

Query: 571 RYLKMQGPYRTM 582
           ++LKMQGPYR+M
Sbjct: 599 QFLKMQGPYRSM 610


>gi|350422758|ref|XP_003493273.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Bombus
           impatiens]
          Length = 610

 Score =  742 bits (1915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/552 (68%), Positives = 461/552 (83%), Gaps = 17/552 (3%)

Query: 48  DMPE-----KDNKK------------CGVDVKKTVTVKHPESNKPKPTTKKKEPIQADLN 90
           DMPE     +DNK+             G D KKTVTVKHPESNKPKPTTKK +PIQADL+
Sbjct: 59  DMPEDVDVLRDNKEQTKEKKLSSASIAGPDTKKTVTVKHPESNKPKPTTKKGKPIQADLD 118

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + KEF RCKEE +  LDLSKS+ITHLP +V  LTHL E YLYGNKL +LP +IG + NL 
Sbjct: 119 VSKEFTRCKEECLERLDLSKSNITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLGNLE 178

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L+ENSLTSLP++L NL+ LRVLDLRHNKL+E+P VVYKLT+L  L+LRFNR++ V  
Sbjct: 179 TLALSENSLTSLPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSD 238

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           +I+ L+NL+MLS+R+NKIRELP  +G+L NL+T D++HNHLE LP+EIGNC  L TLDLQ
Sbjct: 239 NIRNLTNLTMLSLRENKIRELPAGIGKLVNLITFDISHNHLEHLPEEIGNCVQLSTLDLQ 298

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HNEL++IPD +G L++LTRL L YNRL S+P++L+ C  ++EF+VEG  +S LPDGLL+S
Sbjct: 299 HNELLDIPDTIGRLVSLTRLGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGLLAS 358

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           L+ +  ITLSRN FTAYPSGGP QFT+VYSIN EHN+IDKIPY IFSRAKNL+K+NMK+N
Sbjct: 359 LSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYAIFSRAKNLAKLNMKEN 418

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            LT+LPLD+GTWV + ELNLGTNQ++K+ +DIQ L NLEVL+LSNNLLK++P+SI NLRK
Sbjct: 419 QLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRK 478

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L+ LDLEENK+ESLPNEIGFL++LQ+LILQSNQ+ SLPRAIGHLTNL+YLSVGENNL  +
Sbjct: 479 LRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYL 538

Query: 511 PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLII 570
           PEEIGTLENL +LY+NDN  L+N+PFELALC+NL IMS++NCPLS IP EIV GGPSL+I
Sbjct: 539 PEEIGTLENLDSLYVNDNANLHNLPFELALCTNLSIMSIENCPLSHIPPEIVAGGPSLVI 598

Query: 571 RYLKMQGPYRTM 582
           ++LKMQGPYR+M
Sbjct: 599 QFLKMQGPYRSM 610


>gi|357627630|gb|EHJ77268.1| putative shoc2 [Danaus plexippus]
          Length = 567

 Score =  739 bits (1907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/520 (69%), Positives = 440/520 (84%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           K VTVKHPESNKPKPT +K +PIQADL++ +EF+RC++E +  LDLSKSSIT LPP+V  
Sbjct: 48  KVVTVKHPESNKPKPTARKNKPIQADLDVVREFIRCRDEGVKRLDLSKSSITSLPPNVRD 107

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
           LTHL E YLYGNKL +LP++ G +TNL  L L ENSLTSLPDSLA+L+ L+VLDLRHNKL
Sbjct: 108 LTHLVEFYLYGNKLVALPAEFGCLTNLQTLALNENSLTSLPDSLAHLRSLKVLDLRHNKL 167

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
           +++P VVYKLTSL  L+LRFNRI+ V   I  L+NL+MLS+R+NKI+EL   +G+L NLV
Sbjct: 168 SDIPEVVYKLTSLTTLFLRFNRIRVVGDGIANLTNLTMLSLRENKIKELSSGIGKLVNLV 227

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           T D++HNHLE LP+EIGNC  L TLDLQHNEL++IPD +GNL  L R+ L YNRL ++P 
Sbjct: 228 TFDVSHNHLEHLPQEIGNCVNLSTLDLQHNELLDIPDTIGNLQALNRIGLRYNRLNAIPA 287

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
           +LS C H++EFNVEG ++S LPDGLL SLT + ++TLSRN F +YPSGGP QFTSV SIN
Sbjct: 288 SLSNCKHMDEFNVEGNSISQLPDGLLCSLTELTSLTLSRNSFMSYPSGGPAQFTSVSSIN 347

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHNQIDKIPYGIFSRAKNL+K+ MK+NLLTSLPLD+GTW  + ELNLGTNQ+ KL +DI
Sbjct: 348 LEHNQIDKIPYGIFSRAKNLTKLIMKENLLTSLPLDIGTWTNMVELNLGTNQLVKLPDDI 407

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
           Q+L+NLEVL+LSNNLLK++P SIGNLRKL+ LDLEENK+E LPNEIGFL+EL++LI+QSN
Sbjct: 408 QSLINLEVLILSNNLLKRIPPSIGNLRKLRVLDLEENKIEILPNEIGFLQELKKLIVQSN 467

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL SLPR+IGHL NL+YLSVGENNLQ +PEEIGTLENL +LYLNDN  L N+PFELALC 
Sbjct: 468 QLTSLPRSIGHLINLTYLSVGENNLQYLPEEIGTLENLESLYLNDNPNLCNLPFELALCV 527

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           +LQIMS++NCPL+ +P ++V  GPSL+I+YLK QGPYR+M
Sbjct: 528 SLQIMSIENCPLTSLPPDVVSSGPSLVIQYLKSQGPYRSM 567


>gi|321472408|gb|EFX83378.1| hypothetical protein DAPPUDRAFT_315899 [Daphnia pulex]
          Length = 630

 Score =  726 bits (1874), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/526 (70%), Positives = 450/526 (85%)

Query: 57  CGVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHL 116
           C     K VTVKHPESNKPKPT KK +PIQADL++ KEF RCKEE    LDLSKSS+T L
Sbjct: 105 CDGARPKVVTVKHPESNKPKPTVKKNKPIQADLDVAKEFTRCKEEGKSRLDLSKSSVTLL 164

Query: 117 PPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLD 176
           PPSV +LTHL E YLYGNKLA LP +IG + NL+ L L+ENSLT LPDSLANL+ LRVLD
Sbjct: 165 PPSVRELTHLTEFYLYGNKLACLPPEIGCLVNLSTLALSENSLTGLPDSLANLRCLRVLD 224

Query: 177 LRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELG 236
           LRHNKL+++P VVYKL SL  L+LRFNRI+ V  +I+ L++L+MLS+R+NKIRELP  +G
Sbjct: 225 LRHNKLHDIPDVVYKLHSLTTLFLRFNRIRVVGDEIRQLTHLTMLSLRENKIRELPAGIG 284

Query: 237 ELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNR 296
            L NL+T D++HNHLE LP+EIGNC  L +LDLQHNEL++IP+ +G L NL RL L YNR
Sbjct: 285 RLTNLITFDVSHNHLEHLPEEIGNCVQLSSLDLQHNELLDIPESIGQLRNLNRLGLRYNR 344

Query: 297 LESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFT 356
           L SVP +LS CVH++EFNVEG A+S LPDGLLSSL+ + +IT SRN FTAYPSGGP+QF 
Sbjct: 345 LTSVPRSLSNCVHMDEFNVEGNAISHLPDGLLSSLSQLTSITFSRNSFTAYPSGGPSQFI 404

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS 416
           +V+SIN EHNQ+DKIPYGIFSRAK+L+K+NMK+NLLTSLPLD+GTWV + ELNLGTNQ++
Sbjct: 405 NVHSINLEHNQVDKIPYGIFSRAKHLAKLNMKENLLTSLPLDIGTWVNMVELNLGTNQLN 464

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
           K+ +DI  L +LEVL+LSNN LK++P+SIGNLRKL+ LDLEENKLE+LPNEIGFL++L++
Sbjct: 465 KVPDDIALLQSLEVLILSNNNLKRVPNSIGNLRKLRVLDLEENKLETLPNEIGFLRDLKK 524

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
           LI+QSNQL SLPRA+GHL+NL+YLSVGENNL  IPEEIGTLE L +LYLNDN  L+N+PF
Sbjct: 525 LIVQSNQLTSLPRAVGHLSNLTYLSVGENNLSYIPEEIGTLETLESLYLNDNLNLHNLPF 584

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           ELALCS+LQIMS++NCPLSQIP+EIV GGPSL+I++LKMQGPYR+M
Sbjct: 585 ELALCSSLQIMSIENCPLSQIPAEIVGGGPSLVIQFLKMQGPYRSM 630


>gi|328779859|ref|XP_003249714.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Apis
           mellifera]
          Length = 565

 Score =  719 bits (1855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/506 (69%), Positives = 435/506 (85%), Gaps = 2/506 (0%)

Query: 77  PTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKL 136
           PT+K  +  QADL++ KEF RC+EE +  LDLSKS+ITHLP +V  LTHL E YLYGNKL
Sbjct: 62  PTSKSND--QADLDVSKEFTRCREECLERLDLSKSNITHLPSTVRDLTHLIEFYLYGNKL 119

Query: 137 ASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLK 196
            +LP +IG + NL  L L+ENSLTSLP++L NL+ LRVLDLRHNKL+E+P VVYKLT+L 
Sbjct: 120 VTLPPEIGCLGNLETLALSENSLTSLPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLT 179

Query: 197 ILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPK 256
            L+LRFNR++ V  +I+ L+NL+MLS+R+NKIRELP  +G+L NL+T D++HNHLE LP+
Sbjct: 180 TLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIRELPAGIGKLINLITFDVSHNHLEHLPE 239

Query: 257 EIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE 316
           EIGNC  L TLDLQHNEL++IPD +GNLI+LTRL L YNRL ++P++L+ C  ++EF+VE
Sbjct: 240 EIGNCVQLSTLDLQHNELLDIPDTIGNLISLTRLGLRYNRLTNIPKSLANCKLMDEFSVE 299

Query: 317 GCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIF 376
           G  +S LPDGLL+SL+ +  ITLSRN FTAYPSGGP QFT+VYSIN EHN+IDKIPYGIF
Sbjct: 300 GNQVSQLPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIF 359

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
           SRAKNL+K+NMK+N LT+LPLD+GTW+ + ELNLGTNQ++K+ +DIQ L NLEVL+LSNN
Sbjct: 360 SRAKNLAKLNMKENQLTALPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNN 419

Query: 437 LLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
           LLK++P+SI NLRKL+ LDLEENK+ESLPNEIGFL++LQ+LILQSNQ+ SLPRAIGHLTN
Sbjct: 420 LLKRIPASIANLRKLRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTN 479

Query: 497 LSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ 556
           L+YLSVGENNL  +PEEIGTLENL +LY+NDN  L+N+PFELALC+NL IMS++NCPLSQ
Sbjct: 480 LTYLSVGENNLNYLPEEIGTLENLDSLYVNDNANLHNLPFELALCTNLSIMSIENCPLSQ 539

Query: 557 IPSEIVVGGPSLIIRYLKMQGPYRTM 582
           IP EIV GGPSL+I++LKMQGPYR+M
Sbjct: 540 IPPEIVAGGPSLVIQFLKMQGPYRSM 565


>gi|242006348|ref|XP_002424013.1| leucine-rich repeat protein SHOC-2, putative [Pediculus humanus
           corporis]
 gi|212507305|gb|EEB11275.1| leucine-rich repeat protein SHOC-2, putative [Pediculus humanus
           corporis]
          Length = 608

 Score =  716 bits (1847), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/598 (61%), Positives = 465/598 (77%), Gaps = 24/598 (4%)

Query: 9   RSSSESRIAAERLASYR----------------EESSTALLNSDSSRSDEYGYFEDMPEK 52
           R  +ES  AAERLA YR                 +SS   L ++   + E  +F    +K
Sbjct: 7   RGGNESNSAAERLADYRGNGRGLGSSPGKTEDSSDSSKMELGNEVLDTAESSFFGVSRDK 66

Query: 53  DNKK-----CGVD---VKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENIL 104
           D KK      GV+     K VTVKHPES KPKPT KK +P+Q+DL++ K FLRCK++ + 
Sbjct: 67  DMKKLSSGCIGVENTRPSKVVTVKHPESKKPKPTIKKNKPVQSDLDVSKVFLRCKDDLVS 126

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
            LDLSKSSIT LP SV  LTHLEE YLYGNKL SLPS+IG + NL  L L+ENSLTSLP+
Sbjct: 127 RLDLSKSSITQLPSSVRDLTHLEEFYLYGNKLYSLPSEIGCLVNLQTLALSENSLTSLPE 186

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
           SL +L+ L+VLDLRHNKLNE+P VVYKLT+L  L+LRFNRI+ V  DI+ LSNL+MLS+R
Sbjct: 187 SLVSLKSLKVLDLRHNKLNEIPEVVYKLTTLTTLFLRFNRIRVVDDDIRNLSNLTMLSLR 246

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           +NKI+ELPP +G L NL T D++HN LE LP EIG C  L TLDLQHNEL++IP+ +GNL
Sbjct: 247 ENKIKELPPGIGCLINLTTFDVSHNQLEHLPIEIGQCVQLSTLDLQHNELLDIPETIGNL 306

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             LTRL L YNRL +VP++L  C  ++EFNVEG ++S+LP+GLL+SL+ +  IT+SRN  
Sbjct: 307 QLLTRLGLRYNRLVTVPKSLCNCSRMDEFNVEGNSISNLPEGLLASLSDLTAITISRNNM 366

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
           T+YPSGGP QFT+V+SIN EHN IDKIPYGIF+RAKNL+K+NMK+N LTSLPLD+GTW  
Sbjct: 367 TSYPSGGPAQFTNVHSINLEHNLIDKIPYGIFTRAKNLAKLNMKENQLTSLPLDIGTWTN 426

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           + ELNL TN+++K+ EDIQ L +LEVL+LSNN+LK++P+ +GNLRKL+ LDLEEN++E L
Sbjct: 427 MVELNLATNKLTKIPEDIQCLESLEVLILSNNMLKRIPAGMGNLRKLRILDLEENRIEVL 486

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           PNEIGFL++L +LI+ SNQ+  LPRAIGHL++L YLSVG+NNL S+PEEIGTLE L +LY
Sbjct: 487 PNEIGFLRDLTKLIIHSNQISVLPRAIGHLSSLVYLSVGDNNLTSLPEEIGTLEKLESLY 546

Query: 525 LNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           +NDN  L+++PFELALC NL IMS++NCPLSQIP+EIV GGPSL+I YLKMQGPYR++
Sbjct: 547 VNDNLNLHHLPFELALCKNLHIMSIENCPLSQIPAEIVQGGPSLVIHYLKMQGPYRSI 604


>gi|322784971|gb|EFZ11742.1| hypothetical protein SINV_11435 [Solenopsis invicta]
          Length = 580

 Score =  707 bits (1826), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/524 (64%), Positives = 436/524 (83%)

Query: 59  VDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPP 118
           VD KK V VKHP+SNK KPTTK+ +PIQA+L++ KEF+RC+E  +  LDLSK+SIT LP 
Sbjct: 57  VDSKKIVMVKHPDSNKAKPTTKRNKPIQAELDVSKEFVRCRENCVKRLDLSKASITILPS 116

Query: 119 SVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLR 178
           SV++L HL E YLYGNKL +LP +IGY++NL  L L+EN+LTSLP++L NL+ LRVLDLR
Sbjct: 117 SVKELKHLREFYLYGNKLVTLPPEIGYLSNLETLALSENALTSLPNTLDNLKLLRVLDLR 176

Query: 179 HNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGEL 238
           HNKL E+P VVY+LTSL  LYLRFNR+K V  +I  L+ L+MLS R+NKI+ELP  +GEL
Sbjct: 177 HNKLTEIPDVVYRLTSLTTLYLRFNRLKYVSDNICNLTRLTMLSFRENKIKELPAGIGEL 236

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
            NLVT D++HNHLE LP EIG C  L +LD+QHNEL+++PD +GNL+ LTRL L YNRL 
Sbjct: 237 VNLVTFDVSHNHLEHLPVEIGKCVQLSSLDVQHNELLDLPDTIGNLVALTRLGLRYNRLT 296

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
           ++P++L+ C  ++EF+VEG  +S LPDGLL+SL+ +  ITLSRN FT+YP+GGP QF + 
Sbjct: 297 NIPKSLANCRMMDEFSVEGNQVSHLPDGLLASLSCLTTITLSRNNFTSYPAGGPAQFVNA 356

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
           YSIN EHNQIDKIPYGIFSR++NL+K+NMK+NLL +LPLD+G+WV + ELNLGTNQ+ KL
Sbjct: 357 YSINVEHNQIDKIPYGIFSRSRNLTKLNMKENLLNALPLDIGSWVTMVELNLGTNQLMKL 416

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
            +DIQ L +LEVL+LSNNLLK++P+++ NL KL+ LDLEEN+++ LPN+IG + ELQ+LI
Sbjct: 417 PDDIQCLQSLEVLILSNNLLKRIPTTMVNLHKLRVLDLEENRIDMLPNDIGLMTELQKLI 476

Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFEL 538
           LQSNQ+  LPR+IGHL NL+YLSVGENNL  +PEE+GTL++L +LYLNDN  L+N+PFEL
Sbjct: 477 LQSNQITVLPRSIGHLKNLTYLSVGENNLSCLPEEVGTLDSLESLYLNDNPNLHNLPFEL 536

Query: 539 ALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           ALC NL IMS++NCPLS IP+EIV GGPSL++++LKMQGPYR +
Sbjct: 537 ALCKNLGIMSIENCPLSHIPAEIVAGGPSLVVQFLKMQGPYRPL 580


>gi|307211084|gb|EFN87327.1| Leucine-rich repeat protein SHOC-2 [Harpegnathos saltator]
          Length = 506

 Score =  697 bits (1799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/506 (67%), Positives = 424/506 (83%)

Query: 77  PTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKL 136
           PTTKK +PIQA+L++ K F+RC++E    LDLSK+SITHLP +V  LTHL+E YLYGNKL
Sbjct: 1   PTTKKGKPIQANLDVAKAFVRCRDECKKLLDLSKASITHLPSTVRDLTHLKEFYLYGNKL 60

Query: 137 ASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLK 196
            SLPSQIG +TNL  L L ENSLTSLP++L NL++LRVLDLRHNKLNE+P VVYKL SL 
Sbjct: 61  VSLPSQIGCLTNLETLALNENSLTSLPNTLENLKRLRVLDLRHNKLNEIPDVVYKLKSLV 120

Query: 197 ILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPK 256
            L+LRFNRIK V  +I+ L+NL+ LS+R+NKI+ELP  +G+  NL T D++HNHL+ LP+
Sbjct: 121 TLFLRFNRIKYVSDNIRNLTNLATLSLRENKIKELPSGIGDFLNLHTFDVSHNHLDHLPE 180

Query: 257 EIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE 316
           EIG C  L TLDLQHN+L++IPD +GNL+ L RL L YN L S+PE+LS C  ++EF+VE
Sbjct: 181 EIGKCVQLSTLDLQHNDLLDIPDSIGNLVLLMRLGLRYNALTSIPESLSNCKLMDEFSVE 240

Query: 317 GCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIF 376
           G  +S +PDGLLSSL+++  ITLSRN FT+YPSGGP+QFT++YSI+ E NQIDKIPYGIF
Sbjct: 241 GNHVSQVPDGLLSSLSNLTTITLSRNNFTSYPSGGPSQFTNIYSISMEQNQIDKIPYGIF 300

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
           SRAK L+K+NM+DN LT+LPLD+GTWV + ELNLGTNQ++K+ +DIQ L NLEVL+LSNN
Sbjct: 301 SRAKKLTKLNMRDNQLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQFLQNLEVLILSNN 360

Query: 437 LLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
           LLK+L +SI NLRKL+ LDLEEN+LESLPNEIGFL+ELQ+L+LQSNQL SLPRAIGHLTN
Sbjct: 361 LLKRLSASIANLRKLRVLDLEENRLESLPNEIGFLRELQQLVLQSNQLTSLPRAIGHLTN 420

Query: 497 LSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ 556
           L+  SVGENNL  +PEEIGTLENL TL++NDN  L+N+PFELALC  L  MS+DNCPLS 
Sbjct: 421 LTVFSVGENNLNYLPEEIGTLENLETLHINDNANLHNLPFELALCPKLIFMSIDNCPLSL 480

Query: 557 IPSEIVVGGPSLIIRYLKMQGPYRTM 582
           +P EIV GGP+++I++LKMQGPYR M
Sbjct: 481 MPPEIVAGGPAMVIQFLKMQGPYRAM 506


>gi|427783827|gb|JAA57365.1| Putative leucine-rich repeat protein shoc-2 [Rhipicephalus
           pulchellus]
          Length = 626

 Score =  694 bits (1790), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/520 (66%), Positives = 437/520 (84%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           K VTV HP + KPKPT+KKK  IQADL++ KE  RC+++    LDLSKSSIT LP SV +
Sbjct: 107 KQVTVTHPGTTKPKPTSKKKGSIQADLDVSKELCRCRDQGATRLDLSKSSITVLPSSVRE 166

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
           L+HLEE YLYGNKLA+LP ++G + +L  L L+ENSLT+LPD+LANL+QLRVLD+RHNKL
Sbjct: 167 LSHLEEFYLYGNKLATLPDELGSLVHLETLALSENSLTTLPDTLANLKQLRVLDVRHNKL 226

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
           NE+P VVYKLTSL  L+LRFNRI+ V  +I  L+NL+MLS+R+NKIRELP  +G+L  LV
Sbjct: 227 NEIPEVVYKLTSLTTLFLRFNRIREVSENIANLTNLTMLSLRENKIRELPAGIGKLTQLV 286

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           T D ++NHL+ LP EIGNC  L TLD+QHNELV++PD +GNL+ L+R  + YN+L +VP+
Sbjct: 287 TFDASNNHLKHLPAEIGNCVQLSTLDVQHNELVDLPDTIGNLMVLSRFGIRYNQLTAVPK 346

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
           +LS CV + +FNVE   +S LP+GLL+S T+++ +TLSRN F +YPSGGP QFT+V SIN
Sbjct: 347 SLSNCVLITDFNVESNLVSQLPEGLLASFTNLHTLTLSRNNFASYPSGGPAQFTTVTSIN 406

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHNQI+KIP+GIFSRAK+LSK+NMK+N LTSLPLDLGTW  + ELNLGTNQ++K+ +DI
Sbjct: 407 MEHNQINKIPFGIFSRAKHLSKLNMKENQLTSLPLDLGTWTTMVELNLGTNQLNKIPDDI 466

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
           Q LV LEVL+LSNNLL++LP++IG+L  L+ LDLEEN+L+ LPNEIG LK LQRL++QSN
Sbjct: 467 QYLVCLEVLILSNNLLRRLPATIGSLGALRVLDLEENRLDGLPNEIGHLKNLQRLVVQSN 526

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL +LPRAIG+L NL+YLSVGENNL  IPEEIGTLENL +LY+NDN  L+++PFELALC+
Sbjct: 527 QLTNLPRAIGYLVNLTYLSVGENNLNQIPEEIGTLENLESLYINDNPNLHSLPFELALCT 586

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           NLQIMS++NCPLSQIP+EIV GGPSL+I+YLKM+GPYRT+
Sbjct: 587 NLQIMSIENCPLSQIPAEIVNGGPSLVIQYLKMKGPYRTL 626


>gi|157106660|ref|XP_001649425.1| shoc2 [Aedes aegypti]
 gi|108868804|gb|EAT33029.1| AAEL014718-PA [Aedes aegypti]
          Length = 527

 Score =  692 bits (1787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/520 (67%), Positives = 428/520 (82%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           K VTVKHPESNKPKPTTKK + IQAD+++ KEF RCKEE I  LDLSKSSIT +PPSV+ 
Sbjct: 8   KMVTVKHPESNKPKPTTKKGKAIQADVDVIKEFQRCKEEGIQRLDLSKSSITIIPPSVKD 67

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
            T L E YLYGNK++SLP +IG ++NL  L L ENSLTSLPDSL NL+QL+VLDLRHNKL
Sbjct: 68  CTSLVEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSLPDSLQNLKQLKVLDLRHNKL 127

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
           +E+P V+YKL +L  LYLRFNRIK V  +++ LS+L+MLS+R+NKI ELP  +G L NL 
Sbjct: 128 SEIPDVIYKLHTLTTLYLRFNRIKVVGDNLKNLSHLTMLSLRENKIHELPSAIGHLVNLT 187

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLDL+HNHL+ LP EIGNC  L  LDLQHN+L++IP+ +GNL NL RL L YN+L S+P 
Sbjct: 188 TLDLSHNHLKHLPAEIGNCVNLTALDLQHNDLLDIPETIGNLANLMRLGLRYNQLTSIPV 247

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
           +L  C H++EFNVEG  +S LPDGLL+SL+++  ITLSRN F +YPSGGP QFT+V SIN
Sbjct: 248 SLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSIN 307

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHNQIDKI YGIFSRAK L+K+NMK+N LTSLPLD+GTW  + ELN GTN ++KL +DI
Sbjct: 308 MEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDI 367

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NLE+L+LSNN+LK++P++IGNL+KL+ LDLEEN+LESLP+EIG L +LQ+LILQSN
Sbjct: 368 HCLQNLEILILSNNVLKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDLQKLILQSN 427

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL SLPR IGHLTNL+YLSVGENNLQ +PEEIGTLENL +LY+NDN  L  +P+ELALC 
Sbjct: 428 QLTSLPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESLYINDNASLVKLPYELALCQ 487

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           NL IMS++NCPLS +P E+V GGPSL+I+YLK+  PYR M
Sbjct: 488 NLAIMSIENCPLSALPPEVVSGGPSLVIQYLKLHSPYRQM 527


>gi|170032991|ref|XP_001844363.1| leucine-rich repeat protein SHOC-2 [Culex quinquefasciatus]
 gi|261277883|sp|B0W6M9.1|SUR8_CULQU RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|167873320|gb|EDS36703.1| leucine-rich repeat protein SHOC-2 [Culex quinquefasciatus]
          Length = 628

 Score =  691 bits (1783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/520 (66%), Positives = 431/520 (82%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           K VTVKHPESNKPKPTTKK + IQAD+++ KEF RCKEENIL LDLSKSSIT +PPSV+ 
Sbjct: 109 KVVTVKHPESNKPKPTTKKGKAIQADVDVIKEFQRCKEENILRLDLSKSSITVIPPSVKD 168

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
            T L E YLYGNK++SLP +IG ++NL  L L ENSLTSLPDSL NL+ L+VLDLRHNKL
Sbjct: 169 CTSLIEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSLPDSLQNLKALKVLDLRHNKL 228

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
           +E+P V+YKL +L  LYLRFNRIK V  +++ LS+L+MLS+R+NKI ELP  +G L+NL 
Sbjct: 229 SEIPDVIYKLHTLTTLYLRFNRIKVVGDNLKNLSSLTMLSLRENKIHELPAAIGHLRNLT 288

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLDL+HNHL+ LP+ IGNC  L  LDLQHN+L++IP+ +GNL NL RL L YN+L ++P 
Sbjct: 289 TLDLSHNHLKHLPEAIGNCVNLTALDLQHNDLLDIPETIGNLANLQRLGLRYNQLTAIPV 348

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
           +L  C+H++EFNVEG ++S LPDGLL+SL+++  ITLSRN F +YPSGGP QFT+V SIN
Sbjct: 349 SLRNCIHMDEFNVEGNSISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSIN 408

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHNQIDKI YGIFSRAK L+K+NMK+N LTSLPLD+GTW  + ELN GTN ++KL +DI
Sbjct: 409 MEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWSQMVELNFGTNSLAKLPDDI 468

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NLE+L+LSNN+LK++P++IGNL+KL+ LDLEEN+LESLP+EIG L +LQ+LILQSN
Sbjct: 469 HCLQNLEILILSNNMLKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDLQKLILQSN 528

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
            L SLPR IGHLTNL+YLSVGENNLQ +PEEIGTLENL +LY+NDN  L  +P+ELALC 
Sbjct: 529 ALQSLPRTIGHLTNLTYLSVGENNLQYLPEEIGTLENLESLYINDNASLVKLPYELALCQ 588

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           NL IMS++NCPLS +P E+V GGPSL+I+YLK+  PYR M
Sbjct: 589 NLAIMSIENCPLSALPPEVVGGGPSLVIQYLKLHSPYRQM 628


>gi|312378183|gb|EFR24825.1| hypothetical protein AND_10342 [Anopheles darlingi]
          Length = 614

 Score =  690 bits (1780), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/520 (67%), Positives = 426/520 (81%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           K VTVKHPESNKPKPTTKK + IQAD+++ KEF RCKEENI  LDLSKSSIT +P SV+ 
Sbjct: 95  KVVTVKHPESNKPKPTTKKGKAIQADVDVIKEFQRCKEENIQRLDLSKSSITVIPSSVKD 154

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
            T L E YLYGNK++SLP +IG + NL  L L ENSLTSLPDSL NL+ L+VLDLRHNKL
Sbjct: 155 CTSLVEFYLYGNKISSLPPEIGCLANLKTLALNENSLTSLPDSLQNLRHLKVLDLRHNKL 214

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
           +E+P V+YKL +L  LYLRFNRI+ V  +++ LSNL+MLS+R+NKI ELP  +G L NL 
Sbjct: 215 SEIPDVIYKLHTLTTLYLRFNRIRIVGDNLKNLSNLTMLSLRENKIHELPAAIGHLVNLT 274

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLDL+HNHL+ LPK IGNC  L  LDLQHN+L++IP+ +GNL NL RL L YN+L S+P 
Sbjct: 275 TLDLSHNHLKHLPKAIGNCVNLTALDLQHNDLLDIPETIGNLSNLMRLGLRYNQLTSIPA 334

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
           TL  C H++EFNVEG  +S LPDGLL+SL+++  ITLSRN F +YPSGGP QFT+V SIN
Sbjct: 335 TLRNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSIN 394

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHNQIDKI YGIFSRAK L+K+NMK+N LTSLPLD+GTW  + ELN GTN ++KL +DI
Sbjct: 395 LEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDI 454

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NLE+L+LSNNLLK++P++IGNL+KL+ LDLEEN+LESLP+EIG L +LQ+LILQSN
Sbjct: 455 HCLQNLEILILSNNLLKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDLQKLILQSN 514

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL SLPR IGHLTNL+YLSVGENNLQ +PEEIGTLENL +LY+NDN  L  +P+ELALC 
Sbjct: 515 QLNSLPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESLYINDNASLIKLPYELALCQ 574

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           NL IMS++NCPLS +P E+V GGPSL+I+YLK+  PYR M
Sbjct: 575 NLAIMSIENCPLSALPPEVVSGGPSLVIQYLKLHSPYRQM 614


>gi|332017140|gb|EGI57939.1| Leucine-rich repeat protein soc-2-like protein [Acromyrmex
           echinatior]
          Length = 615

 Score =  687 bits (1773), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/519 (64%), Positives = 427/519 (82%)

Query: 62  KKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVE 121
           KK V +KHP+SNK KP  KK +PIQA+L++ KEF+RC+E+ +  LDLSK+ IT LP SV+
Sbjct: 95  KKIVMIKHPDSNKLKPAGKKTKPIQAELDVGKEFIRCREDCVRRLDLSKACITTLPSSVK 154

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
           +L HL E YLYGNKL +LP +IGY++NL  L L+ENSLT+LP++L NL+ LRVLDLRHNK
Sbjct: 155 ELKHLREFYLYGNKLTTLPPEIGYLSNLETLALSENSLTNLPNTLENLKSLRVLDLRHNK 214

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L  +P VVYKLTSL  L+LRFNR+K V  +I  L+NL+MLS R+NKI+ELP  +GEL NL
Sbjct: 215 LIVIPDVVYKLTSLTTLFLRFNRVKYVKNNICNLTNLTMLSFRENKIKELPAGIGELVNL 274

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
           +T D++HNHLE LP EIG C  L TLD+QHNEL+++PD +GNL++LTRL + YN+L S+P
Sbjct: 275 LTFDVSHNHLEHLPPEIGKCVQLSTLDVQHNELLDLPDTIGNLVSLTRLGIRYNKLTSIP 334

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
           ++L+ C  ++EF+VEG  +S LPDGLL+SL+ +  ITLSRN FT+YP+GGP QF + YSI
Sbjct: 335 KSLANCKLMDEFSVEGNQISHLPDGLLASLSYLTTITLSRNLFTSYPAGGPGQFVNAYSI 394

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
           N EHN+IDKIPYGIFSR+KNL+K+NMK+N L +LPLD+G+WV + ELNLGTNQ++KL +D
Sbjct: 395 NVEHNEIDKIPYGIFSRSKNLTKLNMKENKLNTLPLDIGSWVAMVELNLGTNQLTKLPDD 454

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           IQ L +LE+L+LSNN LK +P++I NL+KL+ LDLEEN ++ LPNEIG + ELQ+LILQS
Sbjct: 455 IQCLQSLEILILSNNGLKHIPTTIVNLQKLRVLDLEENYIDVLPNEIGLMTELQKLILQS 514

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           N+L  LPR IGHL NL+YLSVGEN L  +PEE+GTLE+L +LYLNDN  L+N+PFELALC
Sbjct: 515 NKLTELPRTIGHLRNLTYLSVGENQLTYLPEEVGTLESLESLYLNDNKSLHNLPFELALC 574

Query: 542 SNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYR 580
            NL IMS++NCPLS IP EIV GGPSL+I++LKMQGPYR
Sbjct: 575 KNLGIMSIENCPLSHIPMEIVAGGPSLVIQFLKMQGPYR 613


>gi|347971997|ref|XP_313783.5| AGAP004485-PA [Anopheles gambiae str. PEST]
 gi|333469123|gb|EAA44595.5| AGAP004485-PA [Anopheles gambiae str. PEST]
          Length = 595

 Score =  684 bits (1766), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/520 (66%), Positives = 427/520 (82%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           K VTVKHPESNKPKPTTKK + IQAD+++ KEF RCKEENI  LDLSKSSIT +P SV+ 
Sbjct: 76  KVVTVKHPESNKPKPTTKKGKAIQADVDVIKEFQRCKEENIQRLDLSKSSITVIPASVKD 135

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
            T L E YLYGNK++SLP +IG + NL  L L ENSLTSLPDSL NL+QL+VLDLRHNKL
Sbjct: 136 CTSLVEFYLYGNKISSLPPEIGCLANLKTLALNENSLTSLPDSLQNLKQLKVLDLRHNKL 195

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
           +++P V+YKL +L  LYLRFNRI+ V  +++ LS+L+MLS+R+NKI ELP  +G L NL 
Sbjct: 196 SDIPDVIYKLHTLTTLYLRFNRIRVVGDNLKNLSSLTMLSLRENKIHELPAAIGHLVNLT 255

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLDL+HNHL+ LP+ IGNC  L  LDLQHN+L++IP+ +GNL NL RL L YN+L S+P 
Sbjct: 256 TLDLSHNHLKHLPEAIGNCVNLTALDLQHNDLLDIPESIGNLSNLMRLGLRYNQLTSIPV 315

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
           +L  C H++EFNVEG  +S LPDGLL+SL+++  ITLSRN F +YPSGGP QFT+V SIN
Sbjct: 316 SLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSIN 375

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHNQIDKI YGIFSRAK L+K+NMK+N LTSLPLD+GTW  + ELN GTN ++KL +DI
Sbjct: 376 LEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDI 435

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NLE+L+LSNNLLK++P++IGNL+KL+ LDLEEN+LESLP+EIG L +LQ+LILQSN
Sbjct: 436 HCLQNLEILILSNNLLKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDLQKLILQSN 495

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL +LPR IGHLTNL+YLSVGENNLQ +PEEIGTLENL +LY+NDN  L  +P+ELALC 
Sbjct: 496 QLSALPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESLYINDNPSLIKLPYELALCQ 555

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           NL IMS++NCPLS +P E+V GGPSL+I+YLK+  PYR M
Sbjct: 556 NLAIMSIENCPLSALPPEVVSGGPSLVIQYLKLHSPYRQM 595


>gi|86264151|gb|ABC87809.1| leucine-rich repeat protein [Penaeus monodon]
          Length = 561

 Score =  684 bits (1764), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/576 (62%), Positives = 444/576 (77%), Gaps = 20/576 (3%)

Query: 7   KARSSSESRIAAERLASYREESSTALLNSDSSRSDEYGYFEDMPEKDNKKCGVDVKKTVT 66
           K+RS+ ES  AAERLA Y+ +                   E  P   +   G   +  V 
Sbjct: 6   KSRST-ESSAAAERLADYKGD-------------------EKKPSTSSLGSGDSTQVKVV 45

Query: 67  VKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHL 126
               + +KPK T+KK  PIQADL++ KEF RCK++  L LDLS SSI+ +P SV  LTHL
Sbjct: 46  RVMVDDSKPKHTSKKNRPIQADLDVSKEFNRCKDDGALRLDLSNSSISQIPSSVHNLTHL 105

Query: 127 EELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELP 186
            E YLY NKL +LP +IG + NL  LGL+ENSLTSLPD+LANL++LRVLDLRHNKL E+P
Sbjct: 106 VEFYLYSNKLTTLPPEIGCLVNLQTLGLSENSLTSLPDTLANLEKLRVLDLRHNKLCEIP 165

Query: 187 MVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDL 246
            VVYKLTSL  LYLRFNRI+ V  DI+ L NL  LS+R NKIR+ P  +GEL  L TLD 
Sbjct: 166 DVVYKLTSLITLYLRFNRIRVVGEDIRNLKNLITLSLRGNKIRQPPAGIGELTGLATLDA 225

Query: 247 AHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK 306
           AHNH E L +EIGNC  L TL LQHNEL+++P  +G L NLT L L YNRL +VP +LSK
Sbjct: 226 AHNHSEHLSEEIGNCMCLQTLHLQHNELLDLPQSIGYLRNLTCLGLKYNRLTAVPRSLSK 285

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
           C+HL+EFNVEG  +S LP+GLLSSL++++++TLSRN F +YP GGP+QFT+V+SIN EHN
Sbjct: 286 CIHLDEFNVEGNQISQLPEGLLSSLSNLSSLTLSRNAFNSYPVGGPSQFTNVHSINLEHN 345

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
           Q+D+IPYGIFSRA++L+K+NM  N LTSLPLD+G+W  + ELNLGTN ++K+ +DI  L 
Sbjct: 346 QVDRIPYGIFSRARHLTKLNMNYNGLTSLPLDIGSWQNMVELNLGTNHLTKVPDDISCLQ 405

Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
           +LEVL+LSNN L+K+PSSIGNLRKL+ LDLEEN+LE LP EIGFLK+LQRLI+QSNQL +
Sbjct: 406 SLEVLILSNNNLRKIPSSIGNLRKLRVLDLEENRLEGLPPEIGFLKDLQRLIVQSNQLSA 465

Query: 487 LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQI 546
           LPRA+GHL NL+YLSVGENNL  +PEEIGTLE+L TLY+NDN  L+N+PFELALC+NLQI
Sbjct: 466 LPRALGHLVNLTYLSVGENNLSYLPEEIGTLESLETLYINDNPQLHNLPFELALCTNLQI 525

Query: 547 MSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           MS++NCPLSQIP EIV GGPS +I++LKMQGPYRTM
Sbjct: 526 MSIENCPLSQIPPEIVAGGPSFVIQFLKMQGPYRTM 561


>gi|291234605|ref|XP_002737242.1| PREDICTED: leucine rich repeat containing 7-like [Saccoglossus
           kowalevskii]
          Length = 679

 Score =  681 bits (1757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/521 (64%), Positives = 424/521 (81%)

Query: 62  KKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVE 121
           KK VTVK   +   KPT KKK+ +QADL++ KEF++CK++    LDLSKS I+ LP S++
Sbjct: 21  KKQVTVKEHGNVNAKPTVKKKKSVQADLDVVKEFIKCKDQGESRLDLSKSCISVLPSSIK 80

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
            LT L ELYLYGN+L  LP++IGY++NL  L L+ENSLTSLP SL  L+ ++VLDLRHNK
Sbjct: 81  DLTQLVELYLYGNRLQYLPNEIGYLSNLQKLALSENSLTSLPVSLERLKVIKVLDLRHNK 140

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L E+P VVY+LTSL  L+LRFNRI  V  ++  L+NL+MLS+R+NKIR+LP  +G L +L
Sbjct: 141 LKEIPEVVYRLTSLTTLFLRFNRISDVDEELSNLTNLTMLSLRENKIRKLPQGIGNLTHL 200

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
           +T D++HNHLE LP EIGNC  L +LDLQHNEL+++PD LGNL  L+RL L YNRL+++P
Sbjct: 201 ITFDVSHNHLEHLPSEIGNCEQLSSLDLQHNELLDLPDSLGNLRQLSRLGLRYNRLQAIP 260

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
           ++L  C+ + EFNVE   +SSLP+GLLSSL ++ ++ LSRN F +YP GGPTQF +VYSI
Sbjct: 261 KSLCNCLDMEEFNVENNNISSLPEGLLSSLVNLTSLCLSRNNFNSYPIGGPTQFATVYSI 320

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
           N EHN I KIP+GIF+RAK L+K+NMK+N LT+LPLD+G+W+ + ELNLGTNQ+SKL ED
Sbjct: 321 NMEHNHITKIPFGIFTRAKYLTKLNMKENQLTALPLDVGSWMSMVELNLGTNQLSKLPED 380

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           IQ L +LEVL+LSNNLLKKLP  IGNL+K++ LDLEENKLESLP+EI +L  LQRL+LQS
Sbjct: 381 IQALTSLEVLILSNNLLKKLPRGIGNLQKMRVLDLEENKLESLPSEIAYLCSLQRLVLQS 440

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           NQL +LPR IGHL  L YLSVGENNL S+PEEIGTLENL  LYLNDN  L+N+PFELALC
Sbjct: 441 NQLSTLPRNIGHLGTLQYLSVGENNLTSLPEEIGTLENLEQLYLNDNPNLHNLPFELALC 500

Query: 542 SNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           S+LQIMS++NCPLSQ+P E+V GGPSL+I+YLKM GPYR+M
Sbjct: 501 SSLQIMSIENCPLSQLPQEVVAGGPSLVIQYLKMHGPYRSM 541


>gi|391343057|ref|XP_003745831.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Metaseiulus
           occidentalis]
          Length = 516

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/516 (64%), Positives = 423/516 (81%), Gaps = 1/516 (0%)

Query: 67  VKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHL 126
           V  P ++KPKP ++KK  IQADL++ KE  RC++E    LDLS+S+IT LP +V+ LTHL
Sbjct: 2   VTTPGASKPKPASRKKTSIQADLDVAKELTRCRDEGNTRLDLSRSNITALPANVKDLTHL 61

Query: 127 EELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELP 186
            ELYLYGNKL++LP++IG + NL  L L+ENSLT LPDSL NL+QLRVLDLRHNK  E+P
Sbjct: 62  VELYLYGNKLSTLPNEIGGLVNLATLALSENSLTHLPDSLTNLKQLRVLDLRHNKFTEIP 121

Query: 187 MVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDL 246
            V+Y L SL  L+LRFNRI+ V  +I  LSNL+MLS+R+NKIR LP  +G L+ LVTLD 
Sbjct: 122 PVIYTLRSLTTLFLRFNRIREVSNEIAQLSNLTMLSLRENKIRMLPAGIGLLEQLVTLDA 181

Query: 247 AHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK 306
           ++NH+  LP EIG C  L TLD+QHNEL+++P+ LGNL +L RL L YN+L SVP++ + 
Sbjct: 182 SNNHMLHLPPEIGKCKNLSTLDVQHNELIDVPETLGNLKSLVRLGLRYNQLTSVPKSFAA 241

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
           C  + EFNVE   +S+LPDGLLSS T + ++TLSRN+FT+YP GGP QFTSV+SINFEHN
Sbjct: 242 CALMQEFNVESNNISALPDGLLSSFTQMTSLTLSRNQFTSYPVGGPGQFTSVHSINFEHN 301

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
            I KIP+G+FSRAKNLSK+NMKDN L++LPLD+GTW  + ELNL TNQ+ K+ +DIQ L 
Sbjct: 302 HISKIPFGMFSRAKNLSKLNMKDNQLSALPLDIGTWTNMVELNLATNQLVKIPDDIQYLH 361

Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
           +LEVLVLSNN+L++LP SIG L KL+ LDLEENKLE LPNEIGFL +LQ+L++Q+N L +
Sbjct: 362 SLEVLVLSNNILRRLPGSIGGLSKLRVLDLEENKLEQLPNEIGFLHDLQKLMVQNNLLQT 421

Query: 487 LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQI 546
           LPRAIGHLT+L+YL+VGENN+Q IPEEIGT+E L +LYLNDN  L+ +PFELALCSNLQI
Sbjct: 422 LPRAIGHLTSLTYLNVGENNVQHIPEEIGTMEALESLYLNDNP-LHALPFELALCSNLQI 480

Query: 547 MSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           MS++NCPLSQ+P+EIV+GGPSL+I+YLKM+GPYR+M
Sbjct: 481 MSIENCPLSQMPAEIVIGGPSLVIQYLKMKGPYRSM 516


>gi|195056017|ref|XP_001994909.1| GH17496 [Drosophila grimshawi]
 gi|261277886|sp|B4JTV9.1|SUR8_DROGR RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|193892672|gb|EDV91538.1| GH17496 [Drosophila grimshawi]
          Length = 622

 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/521 (63%), Positives = 417/521 (80%), Gaps = 1/521 (0%)

Query: 63  KTVTVKHPESNKPKPTTKK-KEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVE 121
           K VTVKHPESNKPKPTTKK  + IQAD ++ K   RC++E I  LDLSKSSIT LP +V 
Sbjct: 102 KMVTVKHPESNKPKPTTKKIVKNIQADQDVIKALQRCRDEGIKRLDLSKSSITVLPNTVR 161

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
           +  HL ELYLY NK+  LP++IG + NL  L L ENSLTSLP+SL +  QL+VLDLRHNK
Sbjct: 162 ECVHLTELYLYSNKIGQLPTEIGCLVNLRNLALNENSLTSLPESLKHCTQLKVLDLRHNK 221

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L E+P V+Y+L SL  LYLRFNRI TV  D++ L NL+MLS+R+NKI+EL   +G L NL
Sbjct: 222 LAEIPSVIYRLRSLTTLYLRFNRITTVADDLRQLVNLTMLSLRENKIKELGSAIGALVNL 281

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
            TLD++HNHLE LP++IGNC  L  LDLQHNEL++IPD +GNL +L RL L YNRL  VP
Sbjct: 282 TTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLNCVP 341

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
            +L  C  ++EFNVEG  ++ LPDG+L+SL+++ +ITLSRN+FT+YP+GGP QFT+VYSI
Sbjct: 342 VSLKNCKSMDEFNVEGNGITQLPDGMLASLSALTSITLSRNQFTSYPTGGPAQFTNVYSI 401

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
           N EHN+IDKIPYGIFSRAK L+K+NMK+N+LT+LPLD+GTWV + ELNL TN + KL +D
Sbjct: 402 NLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDVGTWVNMVELNLATNALQKLPDD 461

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           I NL NLE+L+LSNN+LKK+P++IGNLRKL+ LDLEEN++E LP+EIG L ELQRLILQ+
Sbjct: 462 IMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQT 521

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           NQ+  LPR++GHL+NL++LSV ENNLQ +PEEIG+LE+L  LY+N N  L  +PFELALC
Sbjct: 522 NQITMLPRSVGHLSNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALC 581

Query: 542 SNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
            NL+ +++D CPL  IP EI  GGPSL++++LKM  PYR M
Sbjct: 582 QNLKYLNIDKCPLGTIPPEIQAGGPSLVLQWLKMHSPYRQM 622


>gi|195391504|ref|XP_002054400.1| GJ22826 [Drosophila virilis]
 gi|261277888|sp|B4LXW1.1|SUR8_DROVI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194152486|gb|EDW67920.1| GJ22826 [Drosophila virilis]
          Length = 614

 Score =  670 bits (1728), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/521 (63%), Positives = 415/521 (79%), Gaps = 1/521 (0%)

Query: 63  KTVTVKHPESNKPKPTTKK-KEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVE 121
           K VTVKHPESNKPKPTTKK  + IQAD ++ K   RC++E I  LDLSKSSIT LP +V 
Sbjct: 94  KMVTVKHPESNKPKPTTKKIVKNIQADQDVIKALQRCRDEGIKRLDLSKSSITVLPNTVR 153

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
           +  HL ELYLY NK+  LP++IG + NL  L L ENSLTSLP+SL +  QL+VLDLRHNK
Sbjct: 154 ECVHLTELYLYSNKIGQLPTEIGCLVNLRNLALNENSLTSLPESLKHCTQLKVLDLRHNK 213

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L E+P V+Y+L SL  LYLRFNRI  V  D++ L NL+MLS+R+NKI+EL   +G L NL
Sbjct: 214 LAEIPSVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIKELGSAIGALVNL 273

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
            TLD++HNHLE LP +IGNC  L  LDLQHNEL++IPD +GNL +L RL L YNRL SVP
Sbjct: 274 TTLDVSHNHLEHLPDDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLNSVP 333

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
            +L  C  ++EFNVEG  ++ LPDG+L+SL+++  ITLSRN+FT+YP+GGP QFT+VYSI
Sbjct: 334 ISLKNCKSMDEFNVEGNGITQLPDGMLASLSALTTITLSRNQFTSYPTGGPAQFTNVYSI 393

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
           N EHN+IDKIPYGIFSRAK L+K+NMK+N+LT+LPLD+GTWV + ELNL TN + KL +D
Sbjct: 394 NLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDVGTWVNMVELNLATNALQKLPDD 453

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           I NL NLE+L+LSNN+LKK+P++IGNLRKL+ LDLEEN++E LP+EIG L ELQRLILQ+
Sbjct: 454 IMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQT 513

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           NQ+  LPR+IGHL+NL++LSV ENNLQ +PEEIG+LE+L  LY+N N  L  +PFELALC
Sbjct: 514 NQITMLPRSIGHLSNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALC 573

Query: 542 SNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
            NL+ +++D CPL  IP EI  GGPSL++++LKM  PYR M
Sbjct: 574 QNLKYLNIDKCPLGTIPPEIQAGGPSLVLQWLKMHSPYRQM 614


>gi|387016708|gb|AFJ50473.1| Leucine-rich repeat protein SHOC-2-like [Crotalus adamanteus]
          Length = 582

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/581 (58%), Positives = 437/581 (75%), Gaps = 11/581 (1%)

Query: 2   KTNKPKARSSSESRIAAERLASYREESSTALLNSDSSRSDEYGYFEDMPEKDNKKCGVDV 61
           K   PK  S+ E    A+    + +ES         S++      +   +  + + GV  
Sbjct: 12  KEKDPKVSSAKEREKEAKASGGFGKESK-----DRESKTKGKETKDGKKDSSSAQPGVAF 66

Query: 62  KKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVE 121
               T+K P    P P  +KK    ++  + KE  +C+EEN + LDL+K SI  LP SV+
Sbjct: 67  SVDNTIKRP---NPAPGARKK---SSNAEVIKELNKCREENSVRLDLAKRSIHLLPSSVK 120

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
           +LT L ELYLYGNKL SLP+++G + NL  L L+ENSLTSLPDSL NL+QLR++DLRHNK
Sbjct: 121 ELTQLTELYLYGNKLQSLPAEVGCLVNLETLALSENSLTSLPDSLGNLKQLRMVDLRHNK 180

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L E+P VVY+LTSL  LYLRFNRI +V  DI+ LSNL+MLS+R+NKI++LP E+GEL NL
Sbjct: 181 LREIPPVVYRLTSLTTLYLRFNRITSVEKDIKNLSNLTMLSIRENKIKQLPAEIGELCNL 240

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
           +TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL  L  L L YNRL ++P
Sbjct: 241 ITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDTIGNLSTLKSLGLRYNRLSAIP 300

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
            TL++C  L+E N+E   +S+LP+GLLSSL ++ ++TL+RN F +YP GGP+QF+++Y++
Sbjct: 301 RTLAQCSKLDELNLENNIISTLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYAL 360

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
           N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K+ ED
Sbjct: 361 NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPED 420

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           +  LV+LEVL+LSNNLL+ LP  IGNLRKL+ LDLEENKLESLPNEI +L++LQRLIL +
Sbjct: 421 VSGLVSLEVLILSNNLLRNLPHGIGNLRKLRELDLEENKLESLPNEIAYLRDLQRLILTN 480

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           NQL +LPR IGHL NL++L +GEN L  +PEEIGTLENL  LYLNDN  LN++PFELALC
Sbjct: 481 NQLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEELYLNDNPHLNSLPFELALC 540

Query: 542 SNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           S L IMS++NCPLS +P++IV GGPS II++LKMQGPYR M
Sbjct: 541 SKLSIMSIENCPLSTLPAQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|301627568|ref|XP_002942945.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Xenopus
           (Silurana) tropicalis]
          Length = 582

 Score =  664 bits (1713), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/585 (58%), Positives = 434/585 (74%), Gaps = 14/585 (2%)

Query: 2   KTNKPKARSSSESRIAAERLASYREESSTALLNSDSSRSDEYGYFEDMPEKD----NKKC 57
           K   PK R    +  A ER     +E+  A L  +S   D     +D  E        + 
Sbjct: 7   KEKDPKEREPKVTSTAKER----EKEAKAAGLVKESKDKDLKTKVKDAKEGKRDPIGAQA 62

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P    +KK    ++  + KE  +C+EEN   LDL+K SI  LP
Sbjct: 63  GVAFSVDNTIKRP---NPASGMRKK---ASNAEVIKELSKCREENATRLDLAKKSIHMLP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S++ LT + ELYLYGNKL SLP+++G + NL  L L+ENSLTSLPDSL NL++L +LDL
Sbjct: 117 VSIKDLTQITELYLYGNKLQSLPAEVGCLVNLVKLALSENSLTSLPDSLDNLKKLCMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L+SL  L+LRFNRI  V  DI+ LS L+MLS+R+NKI+ LP E+GE
Sbjct: 177 RHNKLREIPAVVYRLSSLTTLFLRFNRITAVEKDIKTLSKLTMLSIRENKIKHLPAEIGE 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L+RL L YNRL
Sbjct: 237 LCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLCSLSRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            +VP +L+KC  L+E N+E   +S+LP+GLLSSL  +N++TL+RN F +YP GGP+QF++
Sbjct: 297 SAVPRSLAKCSELDELNLENNNISTLPEGLLSSLVKVNSLTLARNCFQSYPVGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 357 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 416

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV++EVL+LSNNLLKKLP  IGNLRKL+ LDLEENKLESLPNEI +LK+LQ+L
Sbjct: 417 IPEDVSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKL 476

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 477 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE 536

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQG YR M
Sbjct: 537 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGLYRAM 581


>gi|381145579|gb|AFF59222.1| leucine-rich repeat proteins [Scylla paramamosain]
          Length = 630

 Score =  663 bits (1711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/523 (65%), Positives = 429/523 (82%), Gaps = 3/523 (0%)

Query: 60  DVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPS 119
           D  K+V +   + NK KPT KKK PIQAD ++ KEF RCKE+    LDLS SSI+ LP S
Sbjct: 111 DGAKSVYIV--DGNKVKPTIKKK-PIQADRDVSKEFNRCKEDGAQRLDLSNSSISQLPSS 167

Query: 120 VEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRH 179
           +  +THL E YLY NKL +LP +IG + NL  LGL+ENSLTSLPD+L NL QL+VLDLRH
Sbjct: 168 MNNVTHLVEFYLYSNKLVTLPPEIGRLVNLQTLGLSENSLTSLPDTLVNLVQLKVLDLRH 227

Query: 180 NKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELK 239
           NKL E+P VVYKL SL  L+LRFNRI+ V  +I+ L NL  LS+R+N+IR+LP  +GEL 
Sbjct: 228 NKLTEIPDVVYKLPSLITLFLRFNRIRVVGEEIRNLKNLITLSLRENRIRQLPNGIGELT 287

Query: 240 NLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLES 299
            L TLD+AHNHLE L +EIGNC  L TL LQHNELV +P  +GNL NLT L L YNRL+S
Sbjct: 288 RLGTLDVAHNHLEVLTEEIGNCISLQTLHLQHNELVELPQSIGNLRNLTCLGLRYNRLKS 347

Query: 300 VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVY 359
           VP +LS+C++L+EFNVEG  +S LPDGLLSSL++++++TLSRN F +YP GGP+QFT+V+
Sbjct: 348 VPRSLSRCINLDEFNVEGNQISQLPDGLLSSLSNLSSLTLSRNSFNSYPIGGPSQFTNVH 407

Query: 360 SINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS 419
           SIN EHNQ+D+IPYGIFSRAK+L+K+NM  N LTSLPLD+G+W+ + ELNLGTNQ++K+ 
Sbjct: 408 SINLEHNQVDRIPYGIFSRAKHLTKLNMNYNFLTSLPLDIGSWMNMVELNLGTNQLNKVP 467

Query: 420 EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLIL 479
           +DI  L NLEVL+L+NN L+K+PSSIGNLRKL+ LDLEEN+LE LP EIGFLK+LQ+L++
Sbjct: 468 DDISCLQNLEVLILTNNCLRKIPSSIGNLRKLRVLDLEENRLEGLPPEIGFLKDLQKLVV 527

Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
           QSNQL +LPRA+G+L NL+YLSVGENNL  +PEEIGTLE+L TLYLN+N  L+N+PFELA
Sbjct: 528 QSNQLSALPRALGNLINLTYLSVGENNLSYLPEEIGTLESLETLYLNENPMLHNLPFELA 587

Query: 540 LCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LC+NLQIMS++NCPLSQIP EIV GGPSL+I++LKMQGP RTM
Sbjct: 588 LCTNLQIMSIENCPLSQIPPEIVAGGPSLVIQFLKMQGPCRTM 630


>gi|326923993|ref|XP_003208217.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Meleagris
           gallopavo]
          Length = 582

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/581 (58%), Positives = 438/581 (75%), Gaps = 11/581 (1%)

Query: 2   KTNKPKARSSSESRIAAERLASYREESSTALLNSDSSRSDEYGYFEDMPEKDNKKCGVDV 61
           K   PK  SS E    A+    + +ES          ++      +   +  + + GV  
Sbjct: 12  KEKDPKVPSSKEREKEAKASGGFGKESK-----EKEPKTKGKDAKDGKKDSSSTQPGVAF 66

Query: 62  KKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVE 121
               T+K P    P   T+KK    ++  + KE  +C+EEN + LDLSK SI  LP +V+
Sbjct: 67  SVDNTIKRP---NPATGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHMLPSAVK 120

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
           +LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDLRHNK
Sbjct: 121 ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK 180

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L E+P VVY+LTSL  LYLRFNRI TV  DI+ LS L+MLS+R+NKI++LP E+GEL NL
Sbjct: 181 LREIPSVVYRLTSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL 240

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
           +TLD+AHN LE LP+EIG+CT +  LDLQHNEL+++P+ +GNL +L+RL L YNRL ++P
Sbjct: 241 ITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP 300

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
           ++L+KC  L+E N+E   +S+LP+GLLSSL  + ++TL+RN F +YP GGP+QF+++YS+
Sbjct: 301 KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL 360

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
           N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K+ ED
Sbjct: 361 NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED 420

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           +  LV+LEVL+LSNNLLKKLP  IGNLRKL+ LDLEENKLESLPNEI +LK+LQ+L+L +
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFELALC
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 542 SNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           S L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|198451363|ref|XP_002137290.1| GA27118 [Drosophila pseudoobscura pseudoobscura]
 gi|261277894|sp|B5DX45.1|SUR8_DROPS RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|198131455|gb|EDY67848.1| GA27118 [Drosophila pseudoobscura pseudoobscura]
          Length = 629

 Score =  660 bits (1702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/520 (63%), Positives = 418/520 (80%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           K VTVKHPESNKPKPTTKK +PIQAD ++ K   RC++E I  LDLSKSSIT +P +V++
Sbjct: 110 KMVTVKHPESNKPKPTTKKSKPIQADQDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKE 169

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
             HL ELYLY NK+  LP++IG + NL  L L ENSLTSLP+SL N +QL+VLDLRHNKL
Sbjct: 170 CVHLTELYLYSNKIGQLPAEIGCLVNLRNLALNENSLTSLPESLQNCKQLKVLDLRHNKL 229

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
            E+P V+Y+L +L  LYLRFNRI  V  +++ L NL+MLS+R+NKIREL   +G L NL 
Sbjct: 230 AEIPPVIYRLRTLTTLYLRFNRITAVADNLRQLVNLTMLSLRENKIRELGSAIGALVNLT 289

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLD++HNHLE LP++IGNC  L  LDLQHNEL++IPD +GNL +L RL L YNRL SVP 
Sbjct: 290 TLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLSSVPA 349

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
           TL  C  ++EFNVEG  ++ LPDG+L+SL+ +  ITLSRN+FT+YP+GGP QFT+VYSIN
Sbjct: 350 TLKNCKSMDEFNVEGNGMTQLPDGMLASLSGLTTITLSRNQFTSYPTGGPAQFTNVYSIN 409

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHN+IDKIPYGIFSRAK L+K+NMK+N+LT+LPLD+GTWV + ELNL TN + KL +DI
Sbjct: 410 LEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDI 469

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            NL NLE+L+LSNN+LKK+P++IGN+RKL+ LDLEEN++E LP+EIG L ELQRLILQ+N
Sbjct: 470 MNLQNLEILILSNNMLKKIPNTIGNMRKLRILDLEENRIEVLPHEIGLLHELQRLILQTN 529

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           Q+  LPR+IGHL+NL++LSV ENNLQ +PEEIG+LE L  LY+N N  L  +PFELALC 
Sbjct: 530 QITMLPRSIGHLSNLTHLSVSENNLQFLPEEIGSLEGLENLYINQNPGLEKLPFELALCQ 589

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           NL+ +++D CPLS IP EI  GGPSL++++LKM  PYR M
Sbjct: 590 NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSPYRQM 629


>gi|224052809|ref|XP_002197870.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Taeniopygia guttata]
          Length = 582

 Score =  660 bits (1702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/581 (57%), Positives = 438/581 (75%), Gaps = 11/581 (1%)

Query: 2   KTNKPKARSSSESRIAAERLASYREESSTALLNSDSSRSDEYGYFEDMPEKDNKKCGVDV 61
           K   PK +SS E    A+    + +ES          ++      +   +  + + GV  
Sbjct: 12  KEKDPKVQSSKEREKEAKASGGFGKESK-----EKEPKTKGKDAKDGKKDSSSTQPGVAF 66

Query: 62  KKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVE 121
               T+K P    P   T+KK    ++  + KE  +C+EEN + LDLSK SI  LP +++
Sbjct: 67  SVDNTIKRP---NPATGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHLLPSAIK 120

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
           +LT L ELYLY NKL  LP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDLRHNK
Sbjct: 121 ELTQLTELYLYSNKLQCLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNK 180

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L E+P VVY+L+SL  LYLRFNRI TV  DI+ LS L+MLS+R+NKI++LP E+GEL NL
Sbjct: 181 LREIPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL 240

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
           +TLD+AHN LE LP+EIG+CT +  LDLQHNEL+++P+ +GNL +L+RL L YNRL ++P
Sbjct: 241 ITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP 300

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
           ++L+KC  L+E N+E   +S+LP+GLLSSL  + ++TL+RN F +YP GGP+QF+++YS+
Sbjct: 301 KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL 360

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
           N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K+ ED
Sbjct: 361 NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED 420

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           +  LV+LEVL+LSNNLLKKLP  IGNLRKL+ LDLEENKLESLPNEI +LK+LQ+L+L +
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFELALC
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 542 SNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           S L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|449279622|gb|EMC87166.1| Leucine-rich repeat protein SHOC-2 [Columba livia]
          Length = 582

 Score =  659 bits (1699), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/581 (57%), Positives = 437/581 (75%), Gaps = 11/581 (1%)

Query: 2   KTNKPKARSSSESRIAAERLASYREESSTALLNSDSSRSDEYGYFEDMPEKDNKKCGVDV 61
           K   PK  SS E    A+    + +ES          ++      +   +  + + GV  
Sbjct: 12  KEKDPKVPSSKEREKEAKASGGFGKESK-----EKEPKTKGKDAKDGKKDSSSTQPGVAF 66

Query: 62  KKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVE 121
               T+K P    P   T+KK    ++  + KE  +C+EEN + LDLSK SI  LP +++
Sbjct: 67  SVDNTIKRP---NPATGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHMLPSAIK 120

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
           +LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDLRHNK
Sbjct: 121 ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK 180

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L E+P VVY+L+SL  LYLRFNRI TV  DI+ LS L+MLS+R+NKI++LP E+GEL NL
Sbjct: 181 LREIPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL 240

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
           +TLD+AHN LE LP+EIG+C  +  LDLQHNEL+++P+ +GNL +L+RL L YNRL ++P
Sbjct: 241 ITLDVAHNQLEHLPEEIGSCMQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP 300

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
           ++L+KC  L+E N+E   +S+LP+GLLSSL  + ++TL+RN F +YP GGP+QF+++YS+
Sbjct: 301 KSLAKCSELDELNLENNNISALPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL 360

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
           N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K+ ED
Sbjct: 361 NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED 420

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           +  LV+LEVL+LSNNLLKKLP  IGNLRKL+ LDLEENKLESLPNEI +LK+LQ+L+L +
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFELALC
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 542 SNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           S L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|221379722|ref|NP_732231.2| Sur-8, isoform A [Drosophila melanogaster]
 gi|221379725|ref|NP_650620.3| Sur-8, isoform B [Drosophila melanogaster]
 gi|442619579|ref|NP_001262664.1| Sur-8, isoform F [Drosophila melanogaster]
 gi|261277919|sp|Q9VEK6.3|SUR8_DROME RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|21711803|gb|AAM75092.1| RH55123p [Drosophila melanogaster]
 gi|220903112|gb|AAF55415.3| Sur-8, isoform A [Drosophila melanogaster]
 gi|220903113|gb|AAN13743.2| Sur-8, isoform B [Drosophila melanogaster]
 gi|440217531|gb|AGB96044.1| Sur-8, isoform F [Drosophila melanogaster]
          Length = 641

 Score =  657 bits (1696), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/520 (63%), Positives = 415/520 (79%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           K VTVKHPESNKPKPTTKK +PIQAD ++ K   RC++E I  LDLSKSSIT +P +V++
Sbjct: 122 KMVTVKHPESNKPKPTTKKSKPIQADQDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKE 181

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
             HL ELYLY NK+  LP +IG + +L  L L ENSLTSLP+SL N  QL+VLDLRHNKL
Sbjct: 182 CVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKL 241

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
            E+P V+Y+L SL  LYLRFNRI  V  D++ L NL+MLS+R+NKIREL   +G L NL 
Sbjct: 242 AEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLT 301

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLD++HNHLE LP++IGNC  L  LDLQHNEL++IPD +GNL +L RL + YNRL SVP 
Sbjct: 302 TLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPA 361

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
           TL  C  ++EFNVEG  ++ LPDG+L+SL+ +  ITLSRN+F +YP+GGP QFT+VYSIN
Sbjct: 362 TLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSIN 421

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHN+IDKIPYGIFSRAK L+K+NMK+N+LT+LPLD+GTWV + ELNL TN + KL +DI
Sbjct: 422 LEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDI 481

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            NL NLE+L+LSNN+LKK+P++IGNLRKL+ LDLEEN++E LP+EIG L ELQRLILQ+N
Sbjct: 482 MNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTN 541

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           Q+  LPR+IGHL NL++LSV ENNLQ +PEEIG+LE+L  LY+N N  L  +PFELALC 
Sbjct: 542 QITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQ 601

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           NL+ +++D CPLS IP EI  GGPSL++++LKM  PYR M
Sbjct: 602 NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSPYRQM 641


>gi|442619581|ref|NP_001262665.1| Sur-8, isoform E [Drosophila melanogaster]
 gi|440217532|gb|AGB96045.1| Sur-8, isoform E [Drosophila melanogaster]
          Length = 694

 Score =  657 bits (1696), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/520 (63%), Positives = 415/520 (79%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           K VTVKHPESNKPKPTTKK +PIQAD ++ K   RC++E I  LDLSKSSIT +P +V++
Sbjct: 122 KMVTVKHPESNKPKPTTKKSKPIQADQDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKE 181

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
             HL ELYLY NK+  LP +IG + +L  L L ENSLTSLP+SL N  QL+VLDLRHNKL
Sbjct: 182 CVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKL 241

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
            E+P V+Y+L SL  LYLRFNRI  V  D++ L NL+MLS+R+NKIREL   +G L NL 
Sbjct: 242 AEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLT 301

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLD++HNHLE LP++IGNC  L  LDLQHNEL++IPD +GNL +L RL + YNRL SVP 
Sbjct: 302 TLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPA 361

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
           TL  C  ++EFNVEG  ++ LPDG+L+SL+ +  ITLSRN+F +YP+GGP QFT+VYSIN
Sbjct: 362 TLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSIN 421

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHN+IDKIPYGIFSRAK L+K+NMK+N+LT+LPLD+GTWV + ELNL TN + KL +DI
Sbjct: 422 LEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDI 481

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            NL NLE+L+LSNN+LKK+P++IGNLRKL+ LDLEEN++E LP+EIG L ELQRLILQ+N
Sbjct: 482 MNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTN 541

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           Q+  LPR+IGHL NL++LSV ENNLQ +PEEIG+LE+L  LY+N N  L  +PFELALC 
Sbjct: 542 QITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQ 601

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           NL+ +++D CPLS IP EI  GGPSL++++LKM  PYR M
Sbjct: 602 NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSPYRQM 641


>gi|194900450|ref|XP_001979770.1| GG16778 [Drosophila erecta]
 gi|261277885|sp|B3P3E8.1|SUR8_DROER RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|190651473|gb|EDV48728.1| GG16778 [Drosophila erecta]
          Length = 644

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/520 (63%), Positives = 415/520 (79%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           K VTVKHPESNKPKPTTKK +PIQAD ++ K   RC++E I  LDLSKSSIT +P +V++
Sbjct: 125 KMVTVKHPESNKPKPTTKKSKPIQADQDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKE 184

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
             HL ELYLY NK+  LP +IG + +L  L L ENSLTSLP+SL N  QL+VLDLRHNKL
Sbjct: 185 CVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKL 244

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
            E+P V+Y+L SL  LYLRFNRI  V  D++ L NL+MLS+R+NKIREL   +G L NL 
Sbjct: 245 AEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLT 304

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLD++HNHLE LP++IGNC  L  LDLQHNEL++IPD +GNL +L RL + YNRL SVP 
Sbjct: 305 TLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLNSVPA 364

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
           TL  C  ++EFNVEG  ++ LPDG+L+SL+ +  ITLSRN+F +YP+GGP QFT+VYSIN
Sbjct: 365 TLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSIN 424

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHN+IDKIPYGIFSRAK L+K+NMK+N+LT+LPLD+GTWV + ELNL TN + KL +DI
Sbjct: 425 LEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDI 484

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            NL NLE+L+LSNN+LKK+P++IGNLR+L+ LDLEEN++E LP+EIG L ELQRLILQ+N
Sbjct: 485 MNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPHEIGLLHELQRLILQTN 544

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           Q+  LPR+IGHL NL++LSV ENNLQ +PEEIG+LE+L  LY+N N  L  +PFELALC 
Sbjct: 545 QITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQ 604

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           NL+ +++D CPLS IP EI  GGPSL++++LKM  PYR M
Sbjct: 605 NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSPYRQM 644


>gi|156120535|ref|NP_001095413.1| leucine-rich repeat protein SHOC-2 [Bos taurus]
 gi|426253112|ref|XP_004020244.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Ovis
           aries]
 gi|166977671|sp|A6QLV3.1|SHOC2_BOVIN RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|151553933|gb|AAI48098.1| SHOC2 protein [Bos taurus]
 gi|296472607|tpg|DAA14722.1| TPA: leucine-rich repeat protein SHOC-2 [Bos taurus]
 gi|440906851|gb|ELR57068.1| Leucine-rich repeat protein SHOC-2 [Bos grunniens mutus]
          Length = 582

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/581 (58%), Positives = 435/581 (74%), Gaps = 11/581 (1%)

Query: 2   KTNKPKARSSSESRIAAERLASYREESSTALLNSDSSRSDEYGYFEDMPEKDNKKCGVDV 61
           K   PKA S+ E    A+    + +ES          ++      +   +    + GV  
Sbjct: 12  KEKDPKAPSAKEREKEAKASGGFGKESK-----EKEPKTKGKDAKDGKKDSSAAQPGVAF 66

Query: 62  KKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVE 121
               T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP S++
Sbjct: 67  SVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK 120

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
           +LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDLRHNK
Sbjct: 121 ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK 180

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L E+P VVY+L SL  LYLRFNRI TV  DI+ LS LSMLS+R+NKI++LP E+GEL NL
Sbjct: 181 LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL 240

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
           +TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L+RL L YNRL ++P
Sbjct: 241 ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP 300

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
            +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF+++YS+
Sbjct: 301 RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL 360

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
           N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K+ ED
Sbjct: 361 NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED 420

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           +  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L+L +
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFELALC
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 542 SNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           S L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|383872300|ref|NP_001244517.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
 gi|355783099|gb|EHH65020.1| hypothetical protein EGM_18359 [Macaca fascicularis]
 gi|380784083|gb|AFE63917.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
 gi|383421817|gb|AFH34122.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
 gi|384943642|gb|AFI35426.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
          Length = 582

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/525 (63%), Positives = 417/525 (79%), Gaps = 6/525 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDL
Sbjct: 117 SSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ LS LSMLS+R+NKI++LP E+GE
Sbjct: 177 RHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGE 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L+RL L YNRL
Sbjct: 237 LCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +LSKC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 297 SAIPRSLSKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 357 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 416

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L
Sbjct: 417 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKL 476

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 477 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE 536

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 537 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|148225142|ref|NP_001080350.1| leucine-rich repeat protein SHOC-2 [Xenopus laevis]
 gi|82242622|sp|Q8AVI4.1|SHOC2_XENLA RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|27503220|gb|AAH42263.1| Shoc2-prov protein [Xenopus laevis]
          Length = 577

 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/581 (58%), Positives = 433/581 (74%), Gaps = 11/581 (1%)

Query: 2   KTNKPKARSSSESRIAAERLASYREESSTALLNSDSSRSDEYGYFEDMPEKDNKKCGVDV 61
           K  +PK  S ++ R    +     +ES    L S    + E G  + +      + GV  
Sbjct: 7   KDKEPKVSSGTKEREKEAKAVGPVKESKDKDLKSKVKDAKE-GKRDPV----GAQAGVAF 61

Query: 62  KKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVE 121
               T+K      P    +KK    ++  + KE  +C+EEN   LDL+K SI  LP S++
Sbjct: 62  SLDNTIKRAN---PASGMRKK---ASNAEVIKELSKCREENSTRLDLAKKSIHMLPVSIK 115

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
            LT + ELYLYGNKL SLP+++G + NL  L L+ENSLTSLPDSL NL++L +LDLRHNK
Sbjct: 116 DLTQITELYLYGNKLQSLPAEVGNLVNLVKLALSENSLTSLPDSLDNLKKLCMLDLRHNK 175

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L E+P VVY+L+SL  L+LRFNRI  V  D++ L  L+MLS+R+NKI+ LP E+GEL NL
Sbjct: 176 LREIPPVVYRLSSLTTLFLRFNRITAVEKDLKMLPKLTMLSIRENKIKHLPAEIGELCNL 235

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
           +TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L+RL L YNRL +VP
Sbjct: 236 ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAVP 295

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
            +LSKC  L+E N+E   +S+LP+GLLSSL  +N++TL+RN F +YP GGP+QF+S+YS+
Sbjct: 296 RSLSKCSELDELNLENNNISTLPEGLLSSLVKVNSLTLARNCFQSYPVGGPSQFSSIYSL 355

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
           N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K+ ED
Sbjct: 356 NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED 415

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           +  LV++EVL+LSNNLLKKLP  IGNLRKL+ LDLEENKLESLPNEI +LK+LQ+L+L +
Sbjct: 416 VSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 475

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFELALC
Sbjct: 476 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 535

Query: 542 SNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           S L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 536 SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 576


>gi|195501949|ref|XP_002098015.1| GE24170 [Drosophila yakuba]
 gi|261277890|sp|B4PU77.1|SUR8_DROYA RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194184116|gb|EDW97727.1| GE24170 [Drosophila yakuba]
          Length = 645

 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/520 (63%), Positives = 415/520 (79%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           K VTVKHPESNKPKPTTKK +PIQAD ++ K   RC++E I  LDLSKSSIT +P +V++
Sbjct: 126 KMVTVKHPESNKPKPTTKKSKPIQADQDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKE 185

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
             HL ELYLY NK+  LP +IG + +L  L L ENSLTSLP+SL N  QL+VLDLRHNKL
Sbjct: 186 CVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKL 245

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
            E+P V+Y+L SL  LYLRFNRI  V  D++ L NL+MLS+R+NKIREL   +G L NL 
Sbjct: 246 AEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLT 305

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLD++HNHLE LP++IGNC  L  LDLQHNEL++IPD +GNL +L RL + YNRL SVP 
Sbjct: 306 TLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPA 365

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
           TL  C  ++EFNVEG  ++ LPDG+L+SL+ +  ITLSRN+F +YP+GGP QFT+VYSIN
Sbjct: 366 TLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSIN 425

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHN+IDKIPYGIFSRAK L+K+NMK+N+LT+LPLD+GTWV + ELNL TN + KL +DI
Sbjct: 426 LEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDI 485

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            NL NLE+L+LSNN+LKK+P++IGNLR+L+ LDLEEN++E LP+EIG L ELQRLILQ+N
Sbjct: 486 MNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPHEIGLLHELQRLILQTN 545

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           Q+  LPR+IGHL NL++LSV ENNLQ +PEEIG+LE+L  LY+N N  L  +PFELALC 
Sbjct: 546 QITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQ 605

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           NL+ +++D CPLS IP EI  GGPSL++++LKM  PYR M
Sbjct: 606 NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSPYRQM 645


>gi|27819886|gb|AAO24991.1| LP05663p [Drosophila melanogaster]
          Length = 527

 Score =  656 bits (1693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/520 (63%), Positives = 415/520 (79%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           K VTVKHPESNKPKPTTKK +PIQAD ++ K   RC++E I  LDLSKSSIT +P +V++
Sbjct: 8   KMVTVKHPESNKPKPTTKKSKPIQADQDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKE 67

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
             HL ELYLY NK+  LP +IG + +L  L L ENSLTSLP+SL N  QL+VLDLRHNKL
Sbjct: 68  CVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKL 127

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
            E+P V+Y+L SL  LYLRFNRI  V  D++ L NL+MLS+R+NKIREL   +G L NL 
Sbjct: 128 AEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLT 187

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLD++HNHLE LP++IGNC  L  LDLQHNEL++IPD +GNL +L RL + YNRL SVP 
Sbjct: 188 TLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPA 247

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
           TL  C  ++EFNVEG  ++ LPDG+L+SL+ +  ITLSRN+F +YP+GGP QFT+VYSIN
Sbjct: 248 TLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSIN 307

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHN+IDKIPYGIFSRAK L+K+NMK+N+LT+LPLD+GTWV + ELNL TN + KL +DI
Sbjct: 308 LEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDI 367

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            NL NLE+L+LSNN+LKK+P++IGNLRKL+ LDLEEN++E LP+EIG L ELQRLILQ+N
Sbjct: 368 MNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTN 427

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           Q+  LPR+IGHL NL++LSV ENNLQ +PEEIG+LE+L  LY+N N  L  +PFELALC 
Sbjct: 428 QITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQ 487

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           NL+ +++D CPLS IP EI  GGPSL++++LKM  PYR M
Sbjct: 488 NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSPYRQM 527


>gi|41281398|ref|NP_031399.2| leucine-rich repeat protein SHOC-2 isoform 1 [Homo sapiens]
 gi|114632804|ref|XP_521602.2| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Pan
           troglodytes]
 gi|149689670|ref|XP_001496623.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Equus caballus]
 gi|194042023|ref|XP_001927528.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Sus scrofa]
 gi|296221216|ref|XP_002756642.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Callithrix
           jacchus]
 gi|332835019|ref|XP_003312812.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Pan troglodytes]
 gi|395828086|ref|XP_003787217.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Otolemur garnettii]
 gi|397510493|ref|XP_003825630.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Pan
           paniscus]
 gi|397510495|ref|XP_003825631.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Pan
           paniscus]
 gi|426366199|ref|XP_004050149.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Gorilla gorilla
           gorilla]
 gi|14423936|sp|Q9UQ13.2|SHOC2_HUMAN RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|166977684|sp|Q5RAV5.2|SHOC2_PONAB RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|3252979|gb|AAC39856.1| Ras-binding protein SUR-8 [Homo sapiens]
 gi|3293320|gb|AAC25698.1| leucine-rich repeat protein SHOC-2 [Homo sapiens]
 gi|29792199|gb|AAH50445.1| Soc-2 suppressor of clear homolog (C. elegans) [Homo sapiens]
 gi|119569933|gb|EAW49548.1| soc-2 suppressor of clear homolog (C. elegans), isoform CRA_a [Homo
           sapiens]
 gi|410217418|gb|JAA05928.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410217420|gb|JAA05929.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410267376|gb|JAA21654.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410302564|gb|JAA29882.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410333721|gb|JAA35807.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|417402990|gb|JAA48322.1| Putative leucine-rich repeat protein shoc-2 [Desmodus rotundus]
 gi|431895441|gb|ELK04957.1| Leucine-rich repeat protein SHOC-2 [Pteropus alecto]
          Length = 582

 Score =  656 bits (1692), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/525 (63%), Positives = 417/525 (79%), Gaps = 6/525 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDL
Sbjct: 117 SSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ LS LSMLS+R+NKI++LP E+GE
Sbjct: 177 RHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGE 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L+RL L YNRL
Sbjct: 237 LCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 297 SAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 357 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 416

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L
Sbjct: 417 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKL 476

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 477 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE 536

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 537 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|332212811|ref|XP_003255512.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Nomascus
           leucogenys]
 gi|441600055|ref|XP_004087585.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Nomascus
           leucogenys]
          Length = 582

 Score =  656 bits (1692), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/525 (63%), Positives = 417/525 (79%), Gaps = 6/525 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDL
Sbjct: 117 SSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ LS LSMLS+R+NKI++LP E+GE
Sbjct: 177 RHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGE 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L+RL L YNRL
Sbjct: 237 LCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 297 SAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 357 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 416

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L
Sbjct: 417 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKL 476

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 477 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE 536

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 537 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|402881488|ref|XP_003904303.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Papio anubis]
          Length = 582

 Score =  655 bits (1691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/525 (63%), Positives = 416/525 (79%), Gaps = 6/525 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDL
Sbjct: 117 SSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ LS LSMLS+R+NKI++LP E+GE
Sbjct: 177 RHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGE 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L+RL L YNRL
Sbjct: 237 LCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +LSKC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 297 SAIPRSLSKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 357 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 416

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  +GN RKL+ LDLEENKLESLPNEI +LK+LQ+L
Sbjct: 417 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNFRKLRELDLEENKLESLPNEIAYLKDLQKL 476

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 477 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE 536

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 537 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|195349129|ref|XP_002041099.1| GM15368 [Drosophila sechellia]
 gi|261277895|sp|B4IBI9.1|SUR8_DROSE RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194122704|gb|EDW44747.1| GM15368 [Drosophila sechellia]
          Length = 683

 Score =  655 bits (1691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/520 (63%), Positives = 415/520 (79%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           K VTVKHPESNKPKPTTKK +PIQAD ++ K   RC++E I  LDLSKSSIT +P +V++
Sbjct: 125 KMVTVKHPESNKPKPTTKKSKPIQADQDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKE 184

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
             HL ELYLY NK+  LP +IG + +L  L L ENSLTSLP+SL N  QL+VLDLRHNKL
Sbjct: 185 CVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKL 244

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
            E+P V+Y+L SL  LYLRFNRI  V  D++ L NL+MLS+R+NKIREL   +G L NL 
Sbjct: 245 AEIPSVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLT 304

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLD++HNHLE LP++IGNC  L  LDLQHNEL++IPD +GNL +L RL + YNRL SVP 
Sbjct: 305 TLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPA 364

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
           TL  C  ++EFNVEG  ++ LPDG+L+SL+ +  ITLSRN+F +YP+GGP QFT+VYSIN
Sbjct: 365 TLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSIN 424

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHN+IDKIPYGIFSRAK L+K+NMK+N+LT+LPLD+GTWV + ELNL TN + KL +DI
Sbjct: 425 LEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDI 484

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            NL NLE+L+LSNN+LKK+P++IGNLR+L+ LDLEEN++E LP+EIG L ELQRLILQ+N
Sbjct: 485 MNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPHEIGLLHELQRLILQTN 544

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           Q+  LPR+IGHL NL++LSV ENNLQ +PEEIG+LE+L  LY+N N  L  +PFELALC 
Sbjct: 545 QITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQ 604

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           NL+ +++D CPLS IP EI  GGPSL++++LKM  PYR +
Sbjct: 605 NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSPYRQI 644


>gi|195443980|ref|XP_002069663.1| GK11454 [Drosophila willistoni]
 gi|261277889|sp|B4N9T4.1|SUR8_DROWI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194165748|gb|EDW80649.1| GK11454 [Drosophila willistoni]
          Length = 641

 Score =  655 bits (1691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/520 (64%), Positives = 417/520 (80%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           K VTVKHPESNKPKPTTKK +PIQAD ++ K   RC++E I  LDLSKSSIT +P +V++
Sbjct: 122 KVVTVKHPESNKPKPTTKKSKPIQADQDVIKALQRCRDEGIKRLDLSKSSITVIPNTVKE 181

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
             HL ELYLY NK+  LP++IG + NL  L L ENSLTSLPDSL +  QL+VLDLRHNKL
Sbjct: 182 CVHLTELYLYSNKIGQLPTEIGCLVNLRNLALNENSLTSLPDSLQHCNQLKVLDLRHNKL 241

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
            E+P V+Y+L SL  LYLRFNRI TV  D++ L NL+MLS+R+NKIREL   +G L NL 
Sbjct: 242 AEIPPVIYRLRSLTTLYLRFNRITTVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLT 301

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLD++HNHLE LP++IGNC  L  LDLQHNEL++IPD +GNL +L RL L YNRL SVP 
Sbjct: 302 TLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLTSVPA 361

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
           +L  C  ++EFNVEG  ++ LPDG+L+SL  +  ITLSRN+FT+YP+GGP QFT+VY+IN
Sbjct: 362 SLKNCKSMDEFNVEGNGITQLPDGMLASLNGLTIITLSRNQFTSYPTGGPAQFTNVYNIN 421

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHN+IDKIPYGIFSRAK L+K+NMK+N+LT+LPLD+GTWV + ELNL TN + KL +DI
Sbjct: 422 LEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDI 481

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            NL NLE+L+LSNN+LKK+P++IGNLRKL+ LDLEEN++E LP+EIG L ELQRLILQ+N
Sbjct: 482 MNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTN 541

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           Q+  LPR+IGHL+ L++LSV ENNLQ +PEEIG+LE+L  LY+N N  L  +PFELALC 
Sbjct: 542 QITMLPRSIGHLSQLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQ 601

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           NL+ +++D CPLS IP EI  GGPSL++++LKM  PYR M
Sbjct: 602 NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSPYRQM 641


>gi|327267576|ref|XP_003218575.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Anolis
           carolinensis]
          Length = 582

 Score =  655 bits (1691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/549 (60%), Positives = 425/549 (77%), Gaps = 10/549 (1%)

Query: 44  GYFEDMPEKDNKKCGV---DVKKTVTVKHPE-SNKPKPTTKKKEPIQA------DLNIEK 93
           G+ ++  EK+ K  G    D KK  +   P  +     T K+  P QA      +  + K
Sbjct: 33  GFGKESKEKEPKTKGKEAKDGKKDASSAQPGVAFSVDNTIKRPNPAQAARKKSSNAEVIK 92

Query: 94  EFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLG 153
           E  +C+EEN + LDL+K SI  LP SV++LT L ELYLYGNKL SLP ++G + NL  L 
Sbjct: 93  ELNKCREENSVRLDLAKRSIHLLPSSVKELTQLTELYLYGNKLQSLPPEVGCLVNLVTLA 152

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L+ENSLTSLPDSL NL+QLR++DLRHNKL E+P VVY+LTSL  LYLRFNRI  V  DI+
Sbjct: 153 LSENSLTSLPDSLDNLKQLRMVDLRHNKLREIPPVVYRLTSLTTLYLRFNRITAVEKDIK 212

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            LS L+MLS+R+NKI++LP E+GEL NL+TLD+AHN LE LPKEIGNCT +  LDLQHNE
Sbjct: 213 NLSLLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITKLDLQHNE 272

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L+++PD +GNL +L  L L YNRL ++P +L++C  L+E N+E   +S+LP+GLLSSL +
Sbjct: 273 LLDLPDSIGNLSSLKSLGLRYNRLSAIPRSLAQCSKLDELNLENNIISALPEGLLSSLVN 332

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++TL+RN F +YP GGP+QF+++Y++N EHN+I+KIP+GIFSRAK LSK+NMKDN LT
Sbjct: 333 LTSLTLARNCFQSYPVGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           SLPLD GTW  + ELNL TNQ++K+ ED+  LV+LEVL+LSNNLL+ LP  IGNLRKL+ 
Sbjct: 393 SLPLDFGTWTSMVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLRSLPHGIGNLRKLRE 452

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           LDLEENKLESLPNEI +L++LQRLIL +NQL +LPR IGHL NL++L +GEN L  +PEE
Sbjct: 453 LDLEENKLESLPNEIAYLRDLQRLILTNNQLSTLPRGIGHLINLTHLGLGENFLTQLPEE 512

Query: 514 IGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYL 573
           IGTLENL  LYLNDN  LN++PFELALCS L IMS++NCPL+ +P++IV GGPS II++L
Sbjct: 513 IGTLENLEELYLNDNPHLNSLPFELALCSKLSIMSIENCPLNTLPAQIVAGGPSFIIQFL 572

Query: 574 KMQGPYRTM 582
           KMQGPYR M
Sbjct: 573 KMQGPYRAM 581


>gi|194743364|ref|XP_001954170.1| GF16883 [Drosophila ananassae]
 gi|261277884|sp|B3LWU3.1|SUR8_DROAN RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|190627207|gb|EDV42731.1| GF16883 [Drosophila ananassae]
          Length = 641

 Score =  655 bits (1690), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/520 (63%), Positives = 415/520 (79%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           K VTVKHPESNKPKPTTKK +PIQAD ++ K   RC++E I  LDLSKSSIT +P +V+ 
Sbjct: 122 KMVTVKHPESNKPKPTTKKSKPIQADQDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKD 181

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
              + ELYLY NK+  LP +IG + NL  L L ENSLTSLP+SL N  QL+VLDLRHNKL
Sbjct: 182 CVQITELYLYSNKIGQLPPEIGCLVNLRNLALNENSLTSLPESLQNCNQLKVLDLRHNKL 241

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
            E+P V+Y+L SL  LYLRFNRI  V  D++ L NL+MLS+R+NKIREL   +G L NL 
Sbjct: 242 AEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLT 301

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLD++HNHLE LP++IGNC  L  LDLQHNEL++IPD +GNL +L RL + YNRL SVP 
Sbjct: 302 TLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLTSVPA 361

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
           TL  C  ++EFNVEG  ++ LPDG+L+SL+ +  ITLSRN+FT+YP+GGP QFT+VYSIN
Sbjct: 362 TLKNCKCMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFTSYPTGGPAQFTNVYSIN 421

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHN+IDKIPYGIFSRAK L+K+NMK+N+LT+LPLD+GTWV + ELNL TN + KL +DI
Sbjct: 422 LEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDI 481

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            NL NLE+L+LSNN+LKK+P++IGNLR+L+ LDLEEN++E+LP+EIG L ELQRLILQ+N
Sbjct: 482 MNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIETLPHEIGLLHELQRLILQTN 541

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           Q+  LPR+IGHL NL++LSV ENNLQ +PEEIG+LE+L  LY+N N  L  +PFELALC 
Sbjct: 542 QITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQ 601

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           NL+ +++D CPLS IP EI  GGPSL++++LKM  PYR M
Sbjct: 602 NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSPYRQM 641


>gi|197100985|ref|NP_001126707.1| leucine-rich repeat protein SHOC-2 [Pongo abelii]
 gi|55732408|emb|CAH92905.1| hypothetical protein [Pongo abelii]
          Length = 582

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/525 (63%), Positives = 417/525 (79%), Gaps = 6/525 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L ELYLY NKL SLP+++G + NL  L L+EN+LTSLPDSL NL++LR+LDL
Sbjct: 117 SSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENALTSLPDSLDNLKKLRMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ LS LSMLS+R+NKI++LP E+GE
Sbjct: 177 RHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGE 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L+RL L YNRL
Sbjct: 237 LCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 297 SAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 357 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 416

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L
Sbjct: 417 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKL 476

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 477 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE 536

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 537 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|355719293|gb|AES06552.1| soc-2 suppressor of clear-like protein [Mustela putorius furo]
          Length = 582

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/525 (63%), Positives = 416/525 (79%), Gaps = 6/525 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L ELYLY NKL SLP+++G + NL  L L ENSLTSLPDSL NL++LR+LDL
Sbjct: 117 SSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLPDSLDNLKKLRMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ LS LSMLS+R+NKI++LP E+GE
Sbjct: 177 RHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGE 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L+RL L YNRL
Sbjct: 237 LCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 297 SAIPRSLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 357 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 416

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L
Sbjct: 417 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKL 476

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 477 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE 536

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 537 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|354497491|ref|XP_003510853.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Cricetulus griseus]
 gi|344249840|gb|EGW05944.1| Leucine-rich repeat protein SHOC-2 [Cricetulus griseus]
          Length = 582

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/525 (63%), Positives = 414/525 (78%), Gaps = 6/525 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  RC+EEN   LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRP---NPAPGTRKK---SSNAEVMKELNRCREENSARLDLSKRSIHALP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
           PSV++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDL
Sbjct: 117 PSVKELTQLTELYLYSNKLQSLPAELGCLLNLMTLALSENSLTSLPDSLDNLKKLRMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L SL  LYLRFNRI  V  DI+ L  LSMLS+R+NKI++LP E+GE
Sbjct: 177 RHNKLREIPPVVYRLDSLTTLYLRFNRITAVEKDIKNLPKLSMLSIRENKIKQLPAEIGE 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L RL L YNRL
Sbjct: 237 LCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 297 SAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 357 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 416

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L
Sbjct: 417 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKL 476

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 477 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE 536

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 537 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|403259517|ref|XP_003922256.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Saimiri boliviensis
           boliviensis]
          Length = 582

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/525 (63%), Positives = 416/525 (79%), Gaps = 6/525 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDL
Sbjct: 117 SSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ LS LSMLS+R+NKI++LP E+GE
Sbjct: 177 RHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSRLSMLSIRENKIKQLPAEIGE 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L RL L YNRL
Sbjct: 237 LCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 297 SAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 357 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 416

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L
Sbjct: 417 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKL 476

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 477 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE 536

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 537 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|158259127|dbj|BAF85522.1| unnamed protein product [Homo sapiens]
          Length = 582

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/525 (63%), Positives = 416/525 (79%), Gaps = 6/525 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDL
Sbjct: 117 SSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ LS LSMLS+R+NKI++LP E+GE
Sbjct: 177 RHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGE 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L+RL L YNRL
Sbjct: 237 LCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 297 SAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 357 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 416

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ L
Sbjct: 417 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQEL 476

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 477 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE 536

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 537 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|73998572|ref|XP_535013.2| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Canis
           lupus familiaris]
 gi|301755536|ref|XP_002913604.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Ailuropoda
           melanoleuca]
 gi|410976089|ref|XP_003994458.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Felis
           catus]
 gi|281347753|gb|EFB23337.1| hypothetical protein PANDA_001424 [Ailuropoda melanoleuca]
          Length = 582

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/525 (63%), Positives = 416/525 (79%), Gaps = 6/525 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L ELYLY NKL SLP+++G + NL  L L ENSLTSLPDSL NL++LR+LDL
Sbjct: 117 SSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLPDSLDNLKKLRMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ LS LSMLS+R+NKI++LP E+GE
Sbjct: 177 RHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGE 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L+RL L YNRL
Sbjct: 237 LCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 297 SAIPRSLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 357 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 416

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L
Sbjct: 417 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKL 476

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 477 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE 536

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 537 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|31543701|ref|NP_062632.2| leucine-rich repeat protein SHOC-2 [Mus musculus]
 gi|270341361|ref|NP_001161977.1| leucine-rich repeat protein SHOC-2 [Mus musculus]
 gi|51338746|sp|O88520.2|SHOC2_MOUSE RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|26346735|dbj|BAC37016.1| unnamed protein product [Mus musculus]
 gi|29437101|gb|AAH49775.1| Soc-2 (suppressor of clear) homolog (C. elegans) [Mus musculus]
 gi|52789459|gb|AAH83060.1| Shoc2 protein [Mus musculus]
 gi|74138728|dbj|BAE27179.1| unnamed protein product [Mus musculus]
 gi|94962414|gb|ABF48505.1| Shoc2 [Mus musculus]
 gi|148669769|gb|EDL01716.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_b
           [Mus musculus]
          Length = 582

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/532 (62%), Positives = 418/532 (78%), Gaps = 6/532 (1%)

Query: 51  EKDNKKCGVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSK 110
           E    + GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK
Sbjct: 56  ESSAAQPGVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSK 109

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
            SI  LPPSV++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL+
Sbjct: 110 RSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLK 169

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           +LR+LDLRHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ L  LSMLS+R+NKI++
Sbjct: 170 KLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQ 229

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+GEL NL+TLD+AHN LE LPKEIGNCT +  LDLQHN+L+++PD +GNL +L RL
Sbjct: 230 LPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRL 289

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L YNRL ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP G
Sbjct: 290 GLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVG 349

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
           GP+QF+++YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL
Sbjct: 350 GPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNL 409

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
            TNQ++K+ ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +
Sbjct: 410 ATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAY 469

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           LK+LQ+L+L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  
Sbjct: 470 LKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPN 529

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           L+++PFELALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 530 LHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|3252981|gb|AAC40175.1| Ras-binding protein SUR-8 [Mus musculus]
          Length = 582

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/532 (62%), Positives = 418/532 (78%), Gaps = 6/532 (1%)

Query: 51  EKDNKKCGVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSK 110
           E    + GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK
Sbjct: 56  ESSAAQPGVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSK 109

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
            SI  LPPSV++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL+
Sbjct: 110 RSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLK 169

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           +LR+LDLRHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ L  LSMLS+R+NKI++
Sbjct: 170 KLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQ 229

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+GEL NL+TLD+AHN LE LPKEIGNCT +  LDLQHN+L+++PD +GNL +L RL
Sbjct: 230 LPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRL 289

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L YNRL ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP G
Sbjct: 290 GLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVG 349

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
           GP+QF+++YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL
Sbjct: 350 GPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNL 409

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
            TNQ++K+ ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +
Sbjct: 410 ATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAY 469

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           LK+LQ+L+L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  
Sbjct: 470 LKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPN 529

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           L+++PFELALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 530 LHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|168269502|dbj|BAG09878.1| leucine-rich repeat protein SHOC-2 [synthetic construct]
          Length = 582

 Score =  654 bits (1686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/525 (63%), Positives = 416/525 (79%), Gaps = 6/525 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDL
Sbjct: 117 SSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ LS LSMLS+R+NKI++LP E+GE
Sbjct: 177 RHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGE 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L+RL L YNRL
Sbjct: 237 LCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 297 SAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 357 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 416

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L
Sbjct: 417 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKL 476

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++P E
Sbjct: 477 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLE 536

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 537 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|55728731|emb|CAH91105.1| hypothetical protein [Pongo abelii]
          Length = 582

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/525 (62%), Positives = 416/525 (79%), Gaps = 6/525 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDL
Sbjct: 117 SSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ LS LSMLS+R+NKI++LP E+GE
Sbjct: 177 RHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGE 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L+RL L YNRL
Sbjct: 237 LCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 297 SAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK L K+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 357 IYSLNMEHNRINKIPFGIFSRAKVLGKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 416

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK++Q+L
Sbjct: 417 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDIQKL 476

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 477 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE 536

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 537 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|40788390|dbj|BAA74885.2| KIAA0862 protein [Homo sapiens]
          Length = 584

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/525 (63%), Positives = 416/525 (79%), Gaps = 6/525 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 65  GVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILP 118

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDL
Sbjct: 119 SSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDL 178

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ LS LSMLS+R+NKI++LP E+GE
Sbjct: 179 RHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGE 238

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L+RL L YNRL
Sbjct: 239 LCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRL 298

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 299 SAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFST 358

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 359 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 418

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L
Sbjct: 419 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKL 478

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++P E
Sbjct: 479 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLE 538

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 539 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 583


>gi|55733633|emb|CAH93493.1| hypothetical protein [Pongo abelii]
          Length = 582

 Score =  652 bits (1682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/525 (63%), Positives = 416/525 (79%), Gaps = 6/525 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDL
Sbjct: 117 SSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ LS LSMLS+R+NKI++LP E+GE
Sbjct: 177 RHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGE 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L+RL L YNRL
Sbjct: 237 LCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 297 SAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ +K
Sbjct: 357 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQPTK 416

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  +GNLR+L+ LDLEENKLESLPNEI +LK+LQ+L
Sbjct: 417 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRELRELDLEENKLESLPNEIAYLKDLQKL 476

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 477 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE 536

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 537 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|395502117|ref|XP_003755432.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Sarcophilus
           harrisii]
          Length = 582

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/525 (62%), Positives = 417/525 (79%), Gaps = 6/525 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHMLP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDL
Sbjct: 117 SSIKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ LS L MLS+R+NKI++LP E+GE
Sbjct: 177 RHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLSIRENKIKQLPAEIGE 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIG CT +  LDLQHNEL+++P+ +GNL +L RL L YNRL
Sbjct: 237 LCNLITLDVAHNQLEHLPKEIGTCTQITNLDLQHNELLDLPETIGNLSSLNRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S+LP+GLLSSL ++N++TL+RN F +YP GGP+QF++
Sbjct: 297 SAIPRSLAKCSALEELNLENNNISTLPEGLLSSLVNLNSLTLARNCFQSYPMGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LT+LPLD GTW  + ELNL TNQI+K
Sbjct: 357 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLDYGTWTSMVELNLATNQITK 416

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           +SED+  LV+LEVL+LSNN+LK+LP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L
Sbjct: 417 ISEDVSGLVSLEVLILSNNVLKRLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKL 476

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+ +PFE
Sbjct: 477 VLTNNQLNNLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLENLEELYLNDNPNLHGLPFE 536

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 537 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|432848516|ref|XP_004066384.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Oryzias
           latipes]
          Length = 582

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/587 (57%), Positives = 438/587 (74%), Gaps = 11/587 (1%)

Query: 1   MKTNKPKARSSSESRIAAERLASYREESSTALLN--SDSSR-SDEYGYFEDMPEKDNKKC 57
           M +   K + S E    +      RE+ + AL N   DS + +   G      +KD    
Sbjct: 1   MSSTLGKEKDSKEKDPKSGPAGKEREKEAKALANFVKDSGKETKTKGKDAKEGKKDTSSS 60

Query: 58  --GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITH 115
             GV      T+K P    P   T+KK    ++  + KE  +C+EEN + LDLSK SI  
Sbjct: 61  TQGVAFHVDNTIKRP---NPTQGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHM 114

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LP S+++L  L ELYLY NKL SLP+++G ++ L  L L+ENSLTSLPDSL +L++LR+L
Sbjct: 115 LPTSIKELNQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRML 174

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           DLRHNKL E+P VVY+LTSL  LYLRFNRI TV  DI+ LS L+MLS+R+NKI++LP E+
Sbjct: 175 DLRHNKLREIPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEI 234

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
           GEL NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++P+ +GNL ++ RL L YN
Sbjct: 235 GELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYN 294

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
           RL ++P +L+KC  L E N+E   +S LP+GLLSSL ++ ++TL+RN F +YP GGP+QF
Sbjct: 295 RLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQF 354

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
           +++YS+N EHN I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ+
Sbjct: 355 STIYSLNMEHNHINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           +K+ ED+  LV+LEVL+LSNNLLKKLP  IGNLRKL+ LDLEENKLE LPNEI +LK+LQ
Sbjct: 415 AKIPEDVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQ 474

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
           +L+L +NQL +LPR IGHLTNL++L +GEN LQ +PEEIGTLENL  LYLNDN  L+++P
Sbjct: 475 KLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLP 534

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           FELALCS L IMS++NCPL+ +P++IV GGPS II++LKMQGPYR M
Sbjct: 535 FELALCSKLAIMSIENCPLTHLPAQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|344274389|ref|XP_003408999.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Loxodonta africana]
          Length = 581

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/525 (62%), Positives = 415/525 (79%), Gaps = 6/525 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 62  GVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILP 115

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDL
Sbjct: 116 SSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDL 175

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ LS L MLS+R+NKI++LP E+GE
Sbjct: 176 RHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLSIRENKIKQLPAEIGE 235

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIGNC  +  LDLQHNEL+++PD +GNL +L+RL L YNRL
Sbjct: 236 LCNLITLDVAHNQLEHLPKEIGNCIQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRL 295

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 296 SAIPRSLAKCSALEELNLENNNISTLPETLLSSLVKLNSLTLARNCFQLYPMGGPSQFST 355

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 356 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 415

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L
Sbjct: 416 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKL 475

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 476 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE 535

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 536 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 580


>gi|61557121|ref|NP_001013173.1| leucine-rich repeat protein SHOC-2 [Rattus norvegicus]
 gi|81910889|sp|Q6AYI5.1|SHOC2_RAT RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|50925627|gb|AAH79032.1| Soc-2 (suppressor of clear) homolog (C. elegans) [Rattus
           norvegicus]
 gi|149040408|gb|EDL94446.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_a
           [Rattus norvegicus]
          Length = 582

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/581 (58%), Positives = 430/581 (74%), Gaps = 11/581 (1%)

Query: 2   KTNKPKARSSSESRIAAERLASYREESSTALLNSDSSRSDEYGYFEDMPEKDNKKCGVDV 61
           K   PK  S+ E    A+    + +ES          ++      +   E    + GV  
Sbjct: 12  KEKDPKVPSAKEREKEAKASGGFGKESK-----EKEPKTKGKDAKDGKKESSAAQPGVAF 66

Query: 62  KKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVE 121
               T+K P    P   T+KK    ++  + KE  +C+EEN + LDLSK SI  LPPSV+
Sbjct: 67  SVDNTIKRP---NPALGTRKK---SSNAEVTKELNKCREENSMRLDLSKRSIHILPPSVK 120

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
           +LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDLRHNK
Sbjct: 121 ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK 180

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L E+P VVY+L SL  LYLRFNRI  V  D++ L  LS LS+R+NKI++LP E+GEL NL
Sbjct: 181 LREIPSVVYRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLPAEIGELCNL 240

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
           +TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L RL L YNRL ++P
Sbjct: 241 ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIP 300

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
            +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF+++YS+
Sbjct: 301 RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL 360

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
           N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K+ ED
Sbjct: 361 NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED 420

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           +  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L+L +
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFELALC
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 542 SNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           S L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|113677869|ref|NP_001038251.1| leucine-rich repeat protein SHOC-2 [Danio rerio]
 gi|123888175|sp|Q1L8Y7.1|SHOC2_DANRE RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|94732359|emb|CAK04058.1| novel protein similar to vertebrate soc-2 suppressor of clear
           homolog (C. elegans) (SHOC2) [Danio rerio]
 gi|161611878|gb|AAI55580.1| Si:ch211-197i12.3 [Danio rerio]
          Length = 561

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/517 (63%), Positives = 416/517 (80%), Gaps = 6/517 (1%)

Query: 66  TVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTH 125
           T+K P    P P+T+KK    ++  + KE  +C+EEN + LDLSK SI  LP S+++LT 
Sbjct: 50  TIKRP---NPPPSTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHLLPSSIKELTQ 103

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           L ELYLY NKL SLP ++G ++ L  L L+ENSLTSLPDSL NL++LR+LDLRHNKL E+
Sbjct: 104 LTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREI 163

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P VVY+++SL  LYLRFNRI TV  DI+ LS L+MLS+R+NKI++LP E+GEL NL+TLD
Sbjct: 164 PAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLD 223

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           +AHN LE LPKEIGNCT +  LDLQHN+L+++P+ +GNL ++ RL L YNRL ++P +L+
Sbjct: 224 VAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRSLA 283

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
           KC  L E N+E   +S LP+GLLSSL ++ ++TL+RN F +YP GGP+QF+++YS+N EH
Sbjct: 284 KCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEH 343

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           N+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K+ EDI  L
Sbjct: 344 NRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGL 403

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
           V+LE+L LSNNLLKKLP  IGNLRKL+ LDLEENKLESLPNEI +LK+LQ+L+L +NQL 
Sbjct: 404 VSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLT 463

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
           +LPR IGHLTNL+YL +GEN LQ +PEEIGTLENL  LYLNDN  L+++PFELALCS L 
Sbjct: 464 TLPRGIGHLTNLTYLGLGENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLS 523

Query: 546 IMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 524 IMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 560


>gi|195570161|ref|XP_002103077.1| GD20236 [Drosophila simulans]
 gi|194199004|gb|EDX12580.1| GD20236 [Drosophila simulans]
          Length = 724

 Score =  648 bits (1672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/520 (63%), Positives = 413/520 (79%), Gaps = 3/520 (0%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           K VTVKHPESNKPKPTTKK +PIQAD ++ K   RC+   I  LDLSKSSIT +P +V++
Sbjct: 169 KMVTVKHPESNKPKPTTKKSKPIQADQDVIKALQRCR---IKRLDLSKSSITVIPSTVKE 225

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
             HL ELYLY NK+  LP +IG + +L  L L ENSLTSLP+SL N  QL+VLDLRHNKL
Sbjct: 226 CVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKL 285

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
            E+P V+Y+L SL  LYLRFNRI  V  D++ L NL+MLS+R+NKIREL   +G L NL 
Sbjct: 286 AEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLT 345

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLD++HNHLE LP++IGNC  L  LDLQHNEL++IPD +GNL +L RL + YNRL SVP 
Sbjct: 346 TLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPA 405

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
           TL  C  ++EFNVEG  ++ LPDG+L+SL+ +  ITLSRN+F +YP+GGP QFT+VYSIN
Sbjct: 406 TLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSIN 465

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHN+IDKIPYGIFSRAK L+K+NMK+N+LT+LPLD+GTWV + ELNL TN + KL +DI
Sbjct: 466 LEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDI 525

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            NL NLE+L+LSNN+LKK+P++IGNLR+L+ LDLEEN++E LP+EIG L ELQRLILQ+N
Sbjct: 526 MNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPHEIGLLHELQRLILQTN 585

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           Q+  LPR+IGHL NL++LSV ENNLQ +PEEIG+LE+L  LY+N N  L  +PFELALC 
Sbjct: 586 QITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQ 645

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           NL+ +++D CPLS IP EI  GGPSL++++LKM  PYR +
Sbjct: 646 NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSPYRQI 685


>gi|261277896|sp|B4QVR7.2|SUR8_DROSI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
          Length = 680

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/520 (63%), Positives = 413/520 (79%), Gaps = 3/520 (0%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           K VTVKHPESNKPKPTTKK +PIQAD ++ K   RC+   I  LDLSKSSIT +P +V++
Sbjct: 125 KMVTVKHPESNKPKPTTKKSKPIQADQDVIKALQRCR---IKRLDLSKSSITVIPSTVKE 181

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
             HL ELYLY NK+  LP +IG + +L  L L ENSLTSLP+SL N  QL+VLDLRHNKL
Sbjct: 182 CVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKL 241

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
            E+P V+Y+L SL  LYLRFNRI  V  D++ L NL+MLS+R+NKIREL   +G L NL 
Sbjct: 242 AEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLT 301

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLD++HNHLE LP++IGNC  L  LDLQHNEL++IPD +GNL +L RL + YNRL SVP 
Sbjct: 302 TLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPA 361

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
           TL  C  ++EFNVEG  ++ LPDG+L+SL+ +  ITLSRN+F +YP+GGP QFT+VYSIN
Sbjct: 362 TLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSIN 421

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHN+IDKIPYGIFSRAK L+K+NMK+N+LT+LPLD+GTWV + ELNL TN + KL +DI
Sbjct: 422 LEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDI 481

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            NL NLE+L+LSNN+LKK+P++IGNLR+L+ LDLEEN++E LP+EIG L ELQRLILQ+N
Sbjct: 482 MNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPHEIGLLHELQRLILQTN 541

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           Q+  LPR+IGHL NL++LSV ENNLQ +PEEIG+LE+L  LY+N N  L  +PFELALC 
Sbjct: 542 QITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQ 601

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           NL+ +++D CPLS IP EI  GGPSL++++LKM  PYR +
Sbjct: 602 NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSPYRQI 641


>gi|328716327|ref|XP_003245897.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Acyrthosiphon
           pisum]
          Length = 559

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/521 (63%), Positives = 414/521 (79%), Gaps = 2/521 (0%)

Query: 63  KTVTVKHPESNK-PKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVE 121
           + VTVK  +S K   PT KK+   +   +  KE   C + +   LDLSKS +T +P ++ 
Sbjct: 40  RVVTVKQHDSKKLYTPTAKKENTKKIVQDATKEIQNCNDSSEWRLDLSKSGLTKVPITIR 99

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
             T L ELYLYGNKL +LPS+IG +TNL  L L+ENSLT LPDSLANL  L+VLDLRHNK
Sbjct: 100 DATQLTELYLYGNKLITLPSEIGCLTNLQTLALSENSLTCLPDSLANLTSLKVLDLRHNK 159

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L E+P VVYKL +L  L+LRFNRI+TV  DI  L NL MLS+R+NKI+EL   +G+L  +
Sbjct: 160 LTEVPDVVYKLDTLTTLFLRFNRIRTVSDDISKLVNLVMLSLRENKIKELSSGIGKLDKV 219

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
           VT D++HNHLE LP+EIGNC  L TLDLQHNELV+IP+ +GNL  LTRL L YNRL+++P
Sbjct: 220 VTFDVSHNHLEHLPEEIGNCIQLSTLDLQHNELVDIPETIGNLTLLTRLGLRYNRLKNLP 279

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
            +LS C  ++EFNVEG  LS LPDGLL +L  +N+ITL+RN FTAYP+GGP QF +V SI
Sbjct: 280 NSLSNCNRMDEFNVEGNMLSCLPDGLLVNLKEMNSITLARNSFTAYPTGGPAQFIAVDSI 339

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
           NFEHN+IDKIPYGIFS+A  L+K+NMKDN LTSLPLD+G+W  + ELN+ TN I+KL +D
Sbjct: 340 NFEHNKIDKIPYGIFSKANYLTKLNMKDNALTSLPLDVGSWTNMVELNVATNMITKLPDD 399

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           IQ L +LEVL+LSNNLLK+LP++IGNL+KL+ LDLEENKLE+LP EIG+L+ELQ+LILQS
Sbjct: 400 IQYLQSLEVLILSNNLLKRLPATIGNLQKLRVLDLEENKLETLPQEIGYLRELQKLILQS 459

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           NQL+SLPRAIGHLTNL+YLSVGEN L ++PEEIGTLENL  LY+NDN  L+++PFELALC
Sbjct: 460 NQLLSLPRAIGHLTNLAYLSVGENKLSTLPEEIGTLENLEALYINDNQSLHHLPFELALC 519

Query: 542 SNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           S LQ++ ++NCPLSQ+  + V GGPSL++ YLK+ GPYRT+
Sbjct: 520 SKLQLLGIENCPLSQL-GDAVKGGPSLVMTYLKVNGPYRTL 559


>gi|126273103|ref|XP_001368489.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Monodelphis
           domestica]
          Length = 582

 Score =  645 bits (1665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/517 (63%), Positives = 413/517 (79%), Gaps = 6/517 (1%)

Query: 66  TVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTH 125
           T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP S+++LT 
Sbjct: 71  TIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHMLPSSIKELTQ 124

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDLRHNKL E+
Sbjct: 125 LTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREI 184

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P VVY+L SL  LYLRFNRI TV  DI+ LS L MLS+R+NKI++LP E+GEL NL+TLD
Sbjct: 185 PSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLSIRENKIKQLPAEIGELCNLITLD 244

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           +AHN LE LPKEIG C  +  LDLQHNEL+++P+ +GNL +L RL L YNRL ++P +L+
Sbjct: 245 VAHNQLEHLPKEIGTCIQITNLDLQHNELLDLPETIGNLSSLNRLGLRYNRLSAIPRSLA 304

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
           KC  L E N+E   +S+LP+GLLSSL ++N++TL+RN F +YP GGP+QF+++YS+N EH
Sbjct: 305 KCSALEELNLENNNISTLPEGLLSSLVNLNSLTLARNCFQSYPVGGPSQFSTIYSLNMEH 364

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           N+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K+ ED+  L
Sbjct: 365 NRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLAKIPEDVSGL 424

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
           V+LEVL+LSNN+LKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L+L +NQL 
Sbjct: 425 VSLEVLILSNNVLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLN 484

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
           +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+ +PFELALCS L 
Sbjct: 485 NLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLENLEELYLNDNPNLHGLPFELALCSKLS 544

Query: 546 IMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 545 IMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|242046482|ref|XP_002399506.1| lumican, putative [Ixodes scapularis]
 gi|215497547|gb|EEC07041.1| lumican, putative [Ixodes scapularis]
          Length = 546

 Score =  645 bits (1665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/511 (66%), Positives = 425/511 (83%), Gaps = 2/511 (0%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           K VTV HP + KPKPT+KKK  IQADL++ KE  RCKEE    LDLSKSSIT LP SV +
Sbjct: 24  KQVTVTHPGTTKPKPTSKKKGSIQADLDVSKELSRCKEEGSTRLDLSKSSITVLPSSVRE 83

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
           L HL E YLYGNKLA+LP ++G + NL  L L+ENSLTSLPD+LA+L+QLRVLDLRHNKL
Sbjct: 84  LGHLVEFYLYGNKLATLPGEVGSLVNLQTLALSENSLTSLPDTLAHLRQLRVLDLRHNKL 143

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
           NE+P VVY+LTSL  L+LRFNRI+ V  +I  L+NL+MLS+R+NKIRELP  +G+L  L+
Sbjct: 144 NEIPEVVYRLTSLTTLFLRFNRIREVGDNIANLTNLTMLSLRENKIRELPAGIGKLTQLI 203

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL--RLSYNRLESV 300
           T D ++N L+ LP EIGNC  L TLD+QHNEL++IP+ +GNL  LTRL  R  YN+L SV
Sbjct: 204 TFDASNNQLKHLPTEIGNCVQLSTLDVQHNELIDIPETIGNLKVLTRLGLRQVYNQLTSV 263

Query: 301 PETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYS 360
           P++LS CV++ +FNVE   +S LP+GLLSS ++++++TLSRN FT+YP GGP+QF SVY+
Sbjct: 264 PKSLSNCVNMTDFNVESNLVSQLPEGLLSSFSNLSSLTLSRNNFTSYPVGGPSQFCSVYA 323

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
           IN EHNQI+KIP+GIFSRA+NL+K+NMKDN LTSLPLD+GTW  + ELNLGTNQ+SK+ +
Sbjct: 324 INMEHNQINKIPFGIFSRARNLTKLNMKDNQLTSLPLDMGTWTNMVELNLGTNQLSKVPD 383

Query: 421 DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQ 480
           DIQ L +LEVL LSNNLL++LP +IG+L KL+ LDLEEN+L++LPNEIG L+ELQ+L+ Q
Sbjct: 384 DIQYLQSLEVLTLSNNLLRRLPPTIGSLAKLRVLDLEENRLDALPNEIGMLRELQKLVAQ 443

Query: 481 SNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELAL 540
           SNQL SLPRAIGHL+NL+YL VGENNL  IPEEIGTL++L +LY+NDN  L+++PFELAL
Sbjct: 444 SNQLSSLPRAIGHLSNLTYLGVGENNLNFIPEEIGTLDSLESLYINDNPNLHSLPFELAL 503

Query: 541 CSNLQIMSLDNCPLSQIPSEIVVGGPSLIIR 571
           CSNLQIMS++NCPLSQIP EIV GGPSL+I+
Sbjct: 504 CSNLQIMSIENCPLSQIPPEIVNGGPSLVIQ 534


>gi|348578841|ref|XP_003475190.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat protein
           SHOC-2-like [Cavia porcellus]
          Length = 584

 Score =  640 bits (1651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/527 (61%), Positives = 413/527 (78%), Gaps = 8/527 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDL
Sbjct: 117 SSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ LS LSMLS+R+NKI++LP E+G+
Sbjct: 177 RHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGD 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L+RL L YNRL
Sbjct: 237 LCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 297 SAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 357 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 416

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ-- 475
           + ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEEN  +  PNEI +LK+LQ  
Sbjct: 417 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENXFDHCPNEIAYLKDLQXN 476

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
           +L+L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++P
Sbjct: 477 KLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLP 536

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           FELALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 537 FELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 583


>gi|443691592|gb|ELT93406.1| hypothetical protein CAPTEDRAFT_215585 [Capitella teleta]
          Length = 534

 Score =  638 bits (1646), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 333/527 (63%), Positives = 422/527 (80%), Gaps = 2/527 (0%)

Query: 56  KCGVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITH 115
           KC +     V  K P S+ P     K + + A  +  ++  +CKE N + LDL KSSIT 
Sbjct: 10  KCVLVAPPGVRPKRPGSSNPG--RPKPQVVSAKTSRWQQLNKCKENNAIRLDLCKSSITT 67

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LP S+++L+ L E++LYGNK  +LP ++G++ NL  L L+ENSL SLPD+LANL++LRVL
Sbjct: 68  LPSSIKELSQLTEIFLYGNKFVTLPPELGHLANLDTLALSENSLQSLPDTLANLRRLRVL 127

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           DLRHNKL E+P VVY L SL  L+LRFNRIK V  DI+ L NL+MLS+R+NKI+ELP  +
Sbjct: 128 DLRHNKLCEVPNVVYSLASLTHLFLRFNRIKVVEDDIRNLKNLTMLSLRENKIKELPSGI 187

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
           G+L NL T D++HNHLE LP+E+G C  + +LDLQHNEL++IP+ +GNL  LTRL L YN
Sbjct: 188 GQLFNLSTFDVSHNHLEHLPEELGQCVQMNSLDLQHNELLDIPESIGNLTLLTRLGLRYN 247

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
           RL SVP +LS CV+++EFNVEG  +S LP+GLLSSLT + +ITLSRN F +YP GGP QF
Sbjct: 248 RLNSVPRSLSNCVNMDEFNVEGNNISQLPEGLLSSLTKLQSITLSRNAFASYPVGGPAQF 307

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
            S YSIN EHNQI+K+P+GIFS+A  L+K+NMKDN L+SLPLD+GTW  + ELNLGTNQ+
Sbjct: 308 CSAYSINLEHNQINKVPFGIFSQASCLTKLNMKDNQLSSLPLDIGTWANMVELNLGTNQL 367

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
            K+SEDI++LVNLEVL LSNN LK+LP++IGNL+KL+ LDLEENKLESLP EIGFLKEL 
Sbjct: 368 MKISEDIKDLVNLEVLTLSNNSLKRLPATIGNLKKLRHLDLEENKLESLPQEIGFLKELT 427

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
           +L++QSNQ+ SLPRAIGHL+NL YL  GENNL +IP+EIGTLENL +LY+NDN  L+N+P
Sbjct: 428 KLVVQSNQITSLPRAIGHLSNLQYLGAGENNLTNIPKEIGTLENLESLYINDNPNLHNLP 487

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           FELALCSNLQIMS++NCPL+QIPSEIV GGPSL+I++LK++GPY  M
Sbjct: 488 FELALCSNLQIMSIENCPLTQIPSEIVNGGPSLVIQFLKLKGPYCQM 534


>gi|348524990|ref|XP_003450005.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Oreochromis
           niloticus]
          Length = 570

 Score =  635 bits (1639), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 322/525 (61%), Positives = 413/525 (78%), Gaps = 6/525 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P   T+KK    ++  + KE  +C+EEN   LDLSK SI  LP
Sbjct: 51  GVAFSVDNTIKRPN---PATGTRKK---SSNAEVIKELNKCREENSTRLDLSKRSIHTLP 104

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L ELYLY NKL SLP+++G ++ L  L L+ENSLTSLPDSL +L++LR+LDL
Sbjct: 105 TSIKELTQLTELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDL 164

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+LTSL  LYLRFNRI TV  DI+ LS L+MLS+R+NKI++LP E+GE
Sbjct: 165 RHNKLREIPPVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGE 224

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L +L+TLD+AHN LE LPKEIG+CT +  LDLQHNEL+++P+ +GNL ++ RL L YNRL
Sbjct: 225 LCSLITLDVAHNQLEHLPKEIGHCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRL 284

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L++C  L E N+E   +S LP+GLLSSL ++ ++TL+RN F +YP GGP+QF++
Sbjct: 285 SAIPRSLAQCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFST 344

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LT+LPLD GTW  + ELNL TNQ++K
Sbjct: 345 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLDFGTWTSMVELNLATNQLTK 404

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + EDI  L +LEVL+LSNNLLKKLP  IGNLRKL+ LDLEENKLE LPNEI +LK+LQ+L
Sbjct: 405 IPEDICGLASLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKL 464

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL  LPR IGHL NL++L +GEN LQ +PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 465 VLTNNQLTMLPRGIGHLLNLTHLGLGENQLQHLPEEIGTLENLEELYLNDNPNLHSLPFE 524

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPL+ +P +IV GGPS II++LKMQGPYR M
Sbjct: 525 LALCSKLSIMSIENCPLTHLPPQIVAGGPSFIIQFLKMQGPYRAM 569


>gi|355562779|gb|EHH19373.1| hypothetical protein EGK_20064 [Macaca mulatta]
          Length = 582

 Score =  632 bits (1630), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 333/525 (63%), Positives = 416/525 (79%), Gaps = 6/525 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDL
Sbjct: 117 SSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ LS LSMLS+R+NKI++LP E+GE
Sbjct: 177 RHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGE 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L+RL L YNRL
Sbjct: 237 LCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +LSKC  L E N+E   +S+LP  LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 297 SAIPRSLSKCSALEELNLENNNISTLPXSLLSSLVKLNSLTLARNCFQLYPVGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 357 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 416

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L
Sbjct: 417 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKL 476

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 477 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE 536

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 537 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|351706806|gb|EHB09725.1| Leucine-rich repeat protein SHOC-2 [Heterocephalus glaber]
          Length = 571

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 330/581 (56%), Positives = 424/581 (72%), Gaps = 22/581 (3%)

Query: 2   KTNKPKARSSSESRIAAERLASYREESSTALLNSDSSRSDEYGYFEDMPEKDNKKCGVDV 61
           K   PK  S+ E    A+    + +ES          ++      +   +    + GV  
Sbjct: 12  KEKDPKVPSAKEREKEAKASGGFGKESK-----EKEPKTKGRDAKDGKKDSSAAQPGVAF 66

Query: 62  KKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVE 121
               T+K P    P P  +KK    ++  + KE  +C+EEN + LDLSK SI  LP S++
Sbjct: 67  SVDNTIKRPN---PAPGNRKK---YSNTEVTKELSKCREENSMRLDLSKRSIHILPSSIK 120

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
                       NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDLRHNK
Sbjct: 121 X-----------NKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK 169

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L E+P VVY L SL  LYLRFNRI TV  DI+ LS LSMLS+R+NKI++LP E+G+L NL
Sbjct: 170 LREIPSVVYGLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGDLCNL 229

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
           +TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L+RL L YNRL ++P
Sbjct: 230 ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP 289

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
            +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF+++YS+
Sbjct: 290 RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL 349

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
           N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K+ ED
Sbjct: 350 NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED 409

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           +  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L+L +
Sbjct: 410 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 469

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFELALC
Sbjct: 470 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 529

Query: 542 SNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           S L IMS++NCPLS +P++IV GGPS II++LKMQGPYR M
Sbjct: 530 SKLSIMSIENCPLSHLPAQIVAGGPSFIIQFLKMQGPYRAM 570


>gi|410917029|ref|XP_003971989.1| PREDICTED: leucine-rich repeat protein SHOC-2-like isoform 1
           [Takifugu rubripes]
          Length = 582

 Score =  623 bits (1607), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 326/525 (62%), Positives = 418/525 (79%), Gaps = 6/525 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P   T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRPN---PAAGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHMLP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L ELYLY NKL SLP+++G +++L  L L+ENSLTSLPDSL +L++L++LDL
Sbjct: 117 TSIKELTQLAELYLYSNKLQSLPAELGCLSSLVTLALSENSLTSLPDSLDSLKKLQMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+LT+L  LYLRFNRI TV  DI++LS L+MLS+R+NKI++LP E+GE
Sbjct: 177 RHNKLREIPAVVYRLTTLTTLYLRFNRITTVEKDIRHLSKLTMLSIRENKIKQLPAEIGE 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L +LVTLD+AHN LE LPKEIGNCT +  LDLQHNEL+++P+ +GNL ++ RL L YNRL
Sbjct: 237 LCSLVTLDVAHNQLEHLPKEIGNCTKITNLDLQHNELLDLPETIGNLASINRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S LP+GLLSSL  + ++TL+RN F +YP GGP+QF++
Sbjct: 297 SAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 357 IYSLNMEHNCINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 416

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  IGNLRKL+ LDLEENKLE LPNEI +LK+LQ+L
Sbjct: 417 IPEDVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKL 476

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN LQ++PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 477 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLQNLPEEIGTLENLEELYLNDNPNLHSLPFE 536

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 537 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581


>gi|390347474|ref|XP_798409.3| PREDICTED: leucine-rich repeat protein SHOC-2-like
           [Strongylocentrotus purpuratus]
          Length = 550

 Score =  616 bits (1588), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 311/510 (60%), Positives = 396/510 (77%)

Query: 62  KKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVE 121
           KK V V        +P  KK +   +++++ KEF +CKE+    LDLSK SIT LP S++
Sbjct: 22  KKQVMVMLDGDQVKRPGKKKPKATHSEVDLSKEFSKCKEQGDRRLDLSKMSITILPSSLK 81

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
            LT L ELYLYGN+L SLPS+IG + NL  L L ENSLT+LP+ L  L  L+VLDLRHNK
Sbjct: 82  DLTQLVELYLYGNRLVSLPSEIGCLCNLERLALNENSLTTLPEELEKLGLLKVLDLRHNK 141

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L E+P VVYKL SL  L+LRFNRI  V  DI  L+ L+MLS+R+NKI+ LP  +G+L  L
Sbjct: 142 LKEIPEVVYKLLSLTTLFLRFNRITQVGEDIHNLTKLTMLSLRENKIKALPRGVGKLTLL 201

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
            T D++HNHLE LP+EIGNCT L +LDLQHNEL+++P+  GNL  L+RL L YNRL  +P
Sbjct: 202 TTFDVSHNHLEHLPEEIGNCTQLSSLDLQHNELLDLPETTGNLKCLSRLGLRYNRLTGIP 261

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
           ++LS CV+L EFNVEG  +  LP+GLL SL  + +I LSRN FTAYP GGP QF +V +I
Sbjct: 262 KSLSNCVNLEEFNVEGNNIGILPEGLLCSLNKLTSICLSRNNFTAYPVGGPQQFATVDTI 321

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
           N +HNQI+KIP+GIFSR+K L+K+NMKDN LT+LPLD+ +W  + ELNLGTNQISKL ED
Sbjct: 322 NMDHNQINKIPFGIFSRSKYLTKLNMKDNQLTALPLDVNSWTSMVELNLGTNQISKLPED 381

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           I++L +LEVL+LSNNLL++LP+ IGNL +L+ LDLEEN+LE+LP+E+ +LKELQ+L +Q+
Sbjct: 382 IEHLTSLEVLILSNNLLRRLPTRIGNLSRLRELDLEENRLEALPSELAYLKELQKLSVQT 441

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           NQL  LPR+IG L+NL YL  GENNL S+PEEIG+LE L  LY+NDN  LN++PFELALC
Sbjct: 442 NQLTQLPRSIGRLSNLVYLKAGENNLASLPEEIGSLEQLQQLYINDNLNLNHLPFELALC 501

Query: 542 SNLQIMSLDNCPLSQIPSEIVVGGPSLIIR 571
           S+LQIMS++NCPLSQIP E+V GGPSL+I+
Sbjct: 502 SSLQIMSIENCPLSQIPQEVVAGGPSLVIQ 531


>gi|156373929|ref|XP_001629562.1| predicted protein [Nematostella vectensis]
 gi|261277881|sp|A7SFP1.1|SHOC2_NEMVE RecName: Full=Leucine-rich repeat protein soc-2 homolog
 gi|156216565|gb|EDO37499.1| predicted protein [Nematostella vectensis]
          Length = 577

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 307/550 (55%), Positives = 415/550 (75%)

Query: 33  LNSDSSRSDEYGYFEDMPEKDNKKCGVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIE 92
           +N+D   +      +    K +KK   + KK VT+      KPKPT KK+    ADL+I 
Sbjct: 18  INADYGEAASLTADDSTAHKSDKKHDPEAKKQVTITVQPGVKPKPTVKKRSTPSADLDIH 77

Query: 93  KEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCL 152
           KE  +C+EE    LDLSK+++T LP  +++LT L ELYLYGN++A LP ++G + NL  L
Sbjct: 78  KEIQKCREEGATRLDLSKAAVTVLPKELKELTSLRELYLYGNRIAVLPPEVGLLPNLETL 137

Query: 153 GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
            L+EN+LT+LPD+L  L +L+VLDLRHNK+ E+P V+YKLT+L  LYLRFNRI  V   I
Sbjct: 138 ALSENNLTTLPDNLVKLTKLKVLDLRHNKIKEIPDVIYKLTTLTTLYLRFNRISVVESGI 197

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L  L  LS+R+NKI+ LP  +G+L +LVTLD++HNH+E LP EIGNC  + +LDLQHN
Sbjct: 198 GNLKLLERLSLRENKIKILPRVIGQLVHLVTLDISHNHIENLPAEIGNCVHMTSLDLQHN 257

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
           ++ ++PD +G L  +TRL L YN+L S+P++L+ C  ++EFN+EG  ++ LP+ LLSSL 
Sbjct: 258 DIPSLPDSIGRLTAMTRLGLRYNQLSSLPDSLANCSGIDEFNIEGNNIAELPEKLLSSLK 317

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
           ++ ++TLSRNKF  +P+G P QF  V +   EHN++ KIP+G+F++AK LSK+N+KDN L
Sbjct: 318 NLTSLTLSRNKFEVFPAGPPKQFCQVNTFIMEHNRMQKIPFGVFNKAKYLSKLNVKDNQL 377

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
           TSLPLD G+W+ L ELN+ TNQISKL EDIQ LVNLEVL+LSNNLLKKLP  IG LRKL+
Sbjct: 378 TSLPLDFGSWISLVELNVATNQISKLPEDIQWLVNLEVLILSNNLLKKLPRGIGALRKLR 437

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
            LD+EENKLES+P EI +L+ L+RL+LQSN L SLPR+IG+L++++YLSVGEN L S+P+
Sbjct: 438 VLDIEENKLESIPTEIEYLRSLERLVLQSNCLGSLPRSIGYLSSVTYLSVGENELVSVPQ 497

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRY 572
           EIG +E+L  LYLNDN  L ++P+EL LC +LQIMS++NCPLS +PS+IV GGPSL+I+Y
Sbjct: 498 EIGNMESLEQLYLNDNENLQSLPYELVLCGSLQIMSIENCPLSALPSQIVAGGPSLVIQY 557

Query: 573 LKMQGPYRTM 582
           L++QGPY  M
Sbjct: 558 LRLQGPYNGM 567


>gi|47214759|emb|CAG01294.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 594

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 313/551 (56%), Positives = 397/551 (72%), Gaps = 46/551 (8%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P   T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRPN---PAAGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHMLP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLD- 176
            S++ +T L ELYLY NKL SLP+++G              L+SLP  L  L Q +  D 
Sbjct: 117 TSIKGVTQLAELYLYSNKLQSLPAELG-------------CLSSLPARLFGLSQ-KAADA 162

Query: 177 -LRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
            LRHNKL E+P VVY+L++L  LYLRFNRI  V  DI+ LS L+MLS+R+NKI++LP E+
Sbjct: 163 GLRHNKLREIPAVVYRLSTLTTLYLRFNRITAVEKDIRNLSKLTMLSIRENKIKQLPAEI 222

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
           GEL +LVTLD+AHN LE LPKEIGNCT +  LDLQHNEL+++P+ +GNL ++ RL L YN
Sbjct: 223 GELCSLVTLDVAHNQLEHLPKEIGNCTKITNLDLQHNELLDLPETIGNLASINRLGLRYN 282

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
           RL ++P +L+KC  L E N+E   +S LP+GLLSSL  + ++TL+RN F +YP GGP+QF
Sbjct: 283 RLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQF 342

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
           +++YS+N EHN I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ+
Sbjct: 343 STIYSLNMEHNCINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 402

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           +K+ ED+  LV+LEVL+LSNNLLKKLP  IGNLRKL+ LDLEENKLE LPNEI +LK+LQ
Sbjct: 403 TKIPEDVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQ 462

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI--------------------- 514
           +L+L +NQL +LPR IGHLTNL++L +GEN LQ +PEEI                     
Sbjct: 463 KLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGESAAEPRCSRRLSANPTPPR 522

Query: 515 ---GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIR 571
              GTLENL  LYLNDN  L+++PFELALCS L IMS++NCPLS +P +IV GGPS II+
Sbjct: 523 LSSGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQ 582

Query: 572 YLKMQGPYRTM 582
           +LKMQGPYR M
Sbjct: 583 FLKMQGPYRAM 593


>gi|119569935|gb|EAW49550.1| soc-2 suppressor of clear homolog (C. elegans), isoform CRA_c [Homo
           sapiens]
          Length = 434

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 289/431 (67%), Positives = 359/431 (83%)

Query: 152 LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD 211
           L L+ENSLTSLPDSL NL++LR+LDLRHNKL E+P VVY+L SL  LYLRFNRI TV  D
Sbjct: 3   LALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD 62

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
           I+ LS LSMLS+R+NKI++LP E+GEL NL+TLD+AHN LE LPKEIGNCT +  LDLQH
Sbjct: 63  IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQH 122

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           NEL+++PD +GNL +L+RL L YNRL ++P +L+KC  L E N+E   +S+LP+ LLSSL
Sbjct: 123 NELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSL 182

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
             +N++TL+RN F  YP GGP+QF+++YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN 
Sbjct: 183 VKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQ 242

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           LTSLPLD GTW  + ELNL TNQ++K+ ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL
Sbjct: 243 LTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKL 302

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           + LDLEENKLESLPNEI +LK+LQ+L+L +NQL +LPR IGHLTNL++L +GEN L  +P
Sbjct: 303 RELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLP 362

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIR 571
           EEIGTLENL  LYLNDN  L+++PFELALCS L IMS++NCPLS +P +IV GGPS II+
Sbjct: 363 EEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQ 422

Query: 572 YLKMQGPYRTM 582
           +LKMQGPYR M
Sbjct: 423 FLKMQGPYRAM 433



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 191/374 (51%), Gaps = 11/374 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +++  L L  + IT +   ++ L+ L  L +  NK+  LP++IG + NL  L +A N L 
Sbjct: 44  DSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLE 103

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  + N  Q+  LDL+HN+L +LP  +  L+SL  L LR+NR+  +   +   S L  
Sbjct: 104 HLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEE 163

Query: 221 LSMRDNKIRELPPE-LGELKNLVTLDLAHNHLEELPKEIGNCTMLVT---LDLQHNELVN 276
           L++ +N I  LP   L  L  L +L LA N  +  P  +G  +   T   L+++HN +  
Sbjct: 164 LNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYP--VGGPSQFSTIYSLNMEHNRINK 221

Query: 277 IP-DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           IP  +      L++L +  N+L S+P        + E N+    L+ +P+  +S L S+ 
Sbjct: 222 IPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED-VSGLVSLE 280

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + LS N     P  G      +  ++ E N+++ +P  I +  K+L K+ + +N LT+L
Sbjct: 281 VLILSNNLLKKLPH-GLGNLRKLRELDLEENKLESLPNEI-AYLKDLQKLVLTNNQLTTL 338

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL-LKKLPSSIGNLRKLKCL 454
           P  +G    LT L LG N ++ L E+I  L NLE L L++N  L  LP  +    KL  +
Sbjct: 339 PRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIM 398

Query: 455 DLEENKLESLPNEI 468
            +E   L  LP +I
Sbjct: 399 SIENCPLSHLPPQI 412


>gi|393905431|gb|EJD73969.1| leucine-rich repeat protein SHOC-2 [Loa loa]
          Length = 498

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 283/495 (57%), Positives = 382/495 (77%)

Query: 88  DLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVT 147
           +L+++++  +CK+     LDLS S I  +P S+  L  L EL+LY NKLA LP++IG + 
Sbjct: 2   NLDLQRDLQKCKDNEETRLDLSSSDIVSIPSSIRDLVQLTELFLYKNKLAVLPNEIGNLV 61

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
           NL  LGL+EN LTSLPD+LA L +L  LDLRHNKL ELP V+Y+++SL+ L+LR+NRI +
Sbjct: 62  NLKKLGLSENGLTSLPDTLAALTRLETLDLRHNKLCELPPVIYQISSLETLWLRYNRIVS 121

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
           +  +I  L  L M+ +R+NKIRELPP +G++K+L+   L++NHL  +P+EIG C+ L  L
Sbjct: 122 IGSEIGRLKRLKMIDLRENKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEIGQCSELTQL 181

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
           DLQHN+LV++P+ +GNL NL RL + YN+L  +P  ++ C  L EF VE   L +LP+G+
Sbjct: 182 DLQHNDLVSLPEAMGNLQNLIRLGIRYNKLRHLPSGMAFCHKLEEFIVESNQLEALPEGM 241

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
           L+SL ++  I LSRN+ T +PSGGP QF S  SIN EHN I KIP+GIFS+A  L+K+N+
Sbjct: 242 LASLPNLKTINLSRNELTVFPSGGPQQFASCVSINMEHNAIAKIPFGIFSKATGLTKLNL 301

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
           K+N LTS+PLD+G W+ +TELNL TNQ+  L +D+  LVNLEVLVLSNN+LKKLPS IG+
Sbjct: 302 KENALTSMPLDMGCWLAMTELNLSTNQLRVLPDDVDKLVNLEVLVLSNNMLKKLPSQIGS 361

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           L+KL+ LDLEEN+L+++PNEIGF+  L +L +QSN+LV LPR IG+LTNL+ L  GEN L
Sbjct: 362 LKKLRELDLEENELDAIPNEIGFVTSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENCL 421

Query: 508 QSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPS 567
            S+PEEIG L++L +LY+NDN  L+N+PFELALC++L+IMS++NCPLSQIP EI  GGPS
Sbjct: 422 TSLPEEIGNLDSLRSLYINDNPSLHNLPFELALCASLEIMSIENCPLSQIPPEITAGGPS 481

Query: 568 LIIRYLKMQGPYRTM 582
           L+I+YLKMQGPYR M
Sbjct: 482 LVIQYLKMQGPYRVM 496


>gi|324504718|gb|ADY42033.1| Leucine-rich repeat protein soc-2 [Ascaris suum]
          Length = 587

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 283/491 (57%), Positives = 376/491 (76%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           ++++E  +C+E +   LDLS S I  +P S+  L  L EL+LY NKL +LP +IG + NL
Sbjct: 91  DLQRELQKCRENDEKRLDLSSSDIVSIPTSIRDLVQLTELFLYKNKLTALPHEIGNLVNL 150

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
           T LGL+EN LTSLPDSL+ L QL  LDLRHNKL E+P V+Y+++SL+ L+LR+NRI +V 
Sbjct: 151 TKLGLSENGLTSLPDSLSALTQLETLDLRHNKLCEIPPVIYQISSLETLWLRYNRIVSVG 210

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
            +I  L  L M+ +R+NKIRELP  +G++ +L+   L++NHL  +P EIG CT L  LDL
Sbjct: 211 AEIGRLKRLKMIDLRENKIRELPATIGQISSLLVCLLSYNHLRTIPDEIGQCTELTQLDL 270

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
           QHN+LV++P  +GNL NL RL + YN+L  +P  +S C  L EF VE   L +LPDG+L+
Sbjct: 271 QHNDLVSLPSTMGNLSNLIRLGIRYNKLRYLPPGMSNCHKLEEFIVESNQLEALPDGMLT 330

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
           SL ++  I LSRN+ T +P+GGP QF S  +IN EHN I KIP+GIF++A  L+K+N+K+
Sbjct: 331 SLPNLKTINLSRNELTNFPAGGPQQFASAVTINMEHNSISKIPFGIFAKATGLTKLNLKE 390

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
           N LTS+PLD+G W  +TELNL TNQ+  L +DI  L+NLEVLVLSNN LKKLPS IG L+
Sbjct: 391 NGLTSMPLDMGAWTAMTELNLSTNQLRVLPDDIDKLINLEVLVLSNNQLKKLPSQIGALK 450

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
           KL+ LDLEEN+L+S+P+EIGF+  L +L +QSN+LVSLPR IG+LTNL+ L  GENNL S
Sbjct: 451 KLRELDLEENELDSVPSEIGFVTTLTKLWIQSNKLVSLPRTIGNLTNLTDLRAGENNLTS 510

Query: 510 IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLI 569
           +PEEIG L++L +LY+NDN+ L+N+PFELALC++L+IMS++NCPLSQIP EI  GGPSL+
Sbjct: 511 LPEEIGNLDSLKSLYINDNSSLHNLPFELALCASLEIMSIENCPLSQIPPEITAGGPSLV 570

Query: 570 IRYLKMQGPYR 580
           I+YLKMQGPYR
Sbjct: 571 IQYLKMQGPYR 581


>gi|71895087|ref|NP_001026407.1| leucine-rich repeat protein SHOC-2 [Gallus gallus]
 gi|82231244|sp|Q5F4C4.1|SHOC2_CHICK RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|60098359|emb|CAH65010.1| hypothetical protein RCJMB04_1b13 [Gallus gallus]
          Length = 529

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 281/460 (61%), Positives = 365/460 (79%), Gaps = 6/460 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P   T+KK    ++  + KE  +C+EEN + LDL+K SI  LP
Sbjct: 63  GVAFSVDNTIKRP---NPATGTRKK---SSNAEVIKELNKCREENSMRLDLAKRSIHMLP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            +V++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDL
Sbjct: 117 SAVKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+LTSL  LYLRFNRI TV  DI+ LS L+MLS+R+NKI++LP E+GE
Sbjct: 177 RHNKLREIPSVVYRLTSLATLYLRFNRITTVEKDIKTLSKLTMLSIRENKIKQLPAEIGE 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LP+EIG+CT +  LDLQHNEL+++P+ +GNL +L+RL L YNRL
Sbjct: 237 LCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P++L+KC  L+E N+E   +S+LP+GLLSSL  + ++TL+RN F +YP GGP+QF++
Sbjct: 297 SAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 357 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 416

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  IGNLRKL+ LDLEENKLESLPNEI +LK+LQ+L
Sbjct: 417 IPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKL 476

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIG +
Sbjct: 477 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGKI 516



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 147/320 (45%), Gaps = 61/320 (19%)

Query: 253 ELPKEIGNCTM--LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           E+ KE+  C     + LDL    +  +P  +  L  LT L L  N+L+S+P  +   V+L
Sbjct: 89  EVIKELNKCREENSMRLDLAKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCLVNL 148

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK 370
               +   +L+SLPD L                              +  ++  HN++ +
Sbjct: 149 VTLALSENSLTSLPDSL-------------------------DNLKKLRMLDLRHNKLRE 183

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           IP  ++               LTSL            L L  N+I+ + +DI+ L  L +
Sbjct: 184 IPSVVYR--------------LTSL----------ATLYLRFNRITTVEKDIKTLSKLTM 219

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA 490
           L +  N +K+LP+ IG L  L  LD+  N+LE LP EIG   ++  L LQ N+L+ LP  
Sbjct: 220 LSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPET 279

Query: 491 IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLD 550
           IG+L++LS L +  N L +IP+ +     L  L L +N  ++ +P E  L S +++ SL 
Sbjct: 280 IGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNN-ISTLP-EGLLSSLVKLTSLT 337

Query: 551 ---NCPLSQIPSEIVVGGPS 567
              NC     P    VGGPS
Sbjct: 338 LARNC-FQSYP----VGGPS 352


>gi|198433833|ref|XP_002122418.1| PREDICTED: similar to Leucine-rich repeat protein SHOC-2
           (Ras-binding protein Sur-8) [Ciona intestinalis]
          Length = 531

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 274/520 (52%), Positives = 391/520 (75%), Gaps = 1/520 (0%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           K  +V++P+ +  K   +KK        ++K   +CK+     LDLS+  +T L  +++ 
Sbjct: 12  KKKSVQYPDQHSTKSGKQKKHSKAMAHEMQKRVSKCKDNQDTRLDLSQLDLTSLSTTIKN 71

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
           +T L E++LY NKLA +P ++G + NLT L L EN LTSLP SL NL+QL++LDLRHNKL
Sbjct: 72  MTQLCEIFLYQNKLAKVPDELGQLVNLTILALNENHLTSLPASLQNLKQLKMLDLRHNKL 131

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
            E+P VVY+L SL+ LYLRFN+I T+ P I+ LSNL+ L +R+NK+RE+P E+G+L  LV
Sbjct: 132 REVPQVVYQLQSLRKLYLRFNKITTIDPAIENLSNLTQLIIRENKVREIPSEIGKLTQLV 191

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           T+D+++N L+E+P+EIGNC ++  LDLQ+N L  +P+ +GNL+ L RL L YN L  +P 
Sbjct: 192 TIDVSYNELKEIPEEIGNCRLVTFLDLQYNRLTQLPESIGNLVKLNRLGLKYNHLLGLPR 251

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
           +L  CV L++ N+E   + +LPDG LSSLT++ ++TL+RNKF++YP GGP+QFTS+ ++N
Sbjct: 252 SLQNCVLLSDLNLENNDIETLPDGFLSSLTNLTSVTLARNKFSSYPVGGPSQFTSLGTLN 311

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHNQ+D+IP+ IFSRA +LS +NM+ N LTSLPLD+G+W  + EL L +NQ+++L +DI
Sbjct: 312 MEHNQVDRIPFEIFSRATHLSTLNMRSNQLTSLPLDVGSWKSMVELCLNSNQLTRLPDDI 371

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L +L+VL++SNNLL+K+P SIG L  L+CLDLEEN LESLP+EI  L +L++L LQ N
Sbjct: 372 GKLQSLQVLMVSNNLLRKIPGSIGQLTNLQCLDLEENNLESLPSEIEHLTQLRKLKLQGN 431

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           +L  LPR +GHL+NL+ L+VGEN ++ +P EIG L++L  LYLNDN  L  +PFELALC+
Sbjct: 432 KLTVLPRGLGHLSNLTILAVGENQMRDLPNEIGNLKSLEELYLNDNP-LQVLPFELALCT 490

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
            L +MS+++CPLSQIP+  V GGPS I++YL+++GPYRTM
Sbjct: 491 KLALMSVEDCPLSQIPTLAVEGGPSTIMQYLRVKGPYRTM 530


>gi|358336649|dbj|GAA32880.2| leucine-rich repeat protein soc-2 homolog [Clonorchis sinensis]
          Length = 586

 Score =  556 bits (1434), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 293/530 (55%), Positives = 385/530 (72%), Gaps = 13/530 (2%)

Query: 59  VDVKK-TVTVKHPESNK-----PKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSS 112
           +DVKK  VTV+ P   K     P P   KK     D +  KE  RC+EEN   LDLSK  
Sbjct: 58  LDVKKGKVTVQRPGDQKAYQCGPNPRKSKK----TDSDALKEIHRCREENTTRLDLSKGQ 113

Query: 113 ITHLPPSVEKLT-HLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQ 171
           +  LPPS+  L  HL ELYLY NKL SLP +IG + +L  L L ENSL+ LPDSLA    
Sbjct: 114 LHSLPPSIRDLAGHLRELYLYCNKLVSLPPEIGLLPHLEILMLQENSLSRLPDSLAGCTN 173

Query: 172 LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
           LR+LD+RHNKL E+P V+Y L +L  L +RFNRI+ V  DI  L+ L +LS+R+NKIR L
Sbjct: 174 LRMLDIRHNKLCEIPPVIYSLVNLTHLLMRFNRIRVVDDDISKLTKLQVLSVRENKIRSL 233

Query: 232 P--PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTR 289
           P  P + +L  L+TLD++HNHLE++P+EI +C  L TL+LQHNEL ++P+ +G L  L R
Sbjct: 234 PSNPGIEKLTQLMTLDVSHNHLEQVPEEIQHCQKLTTLNLQHNELRSLPESIGELRLLER 293

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS 349
           + L YN LE +P ++++C +L E N+EG  +  LP+GLL+ L  ++++ +SRN F A+P 
Sbjct: 294 VGLRYNHLECLPASMAQCDNLLELNIEGNNIVQLPEGLLAHLRKLSSLVVSRNYFRAFPP 353

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
           GGP QFTS+ S+N +HNQI KIP+GIFSRA +L+K+NMKDN L SLP D+ +W  L ELN
Sbjct: 354 GGPQQFTSIQSLNMDHNQISKIPFGIFSRASHLAKLNMKDNQLASLPPDIKSWEVLVELN 413

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           LGTNQ++KL +D+++LVNLEVL+LSNN LK++P +I  L+KL+ LDLEEN LE LP EIG
Sbjct: 414 LGTNQLTKLPDDVEHLVNLEVLILSNNQLKRIPPTIQELKKLQLLDLEENHLECLPLEIG 473

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            L ELQRLI+QSN+L  LPR IG L +L +L+VGEN+LQ +P EIG L  L TLYLNDN 
Sbjct: 474 QLSELQRLIVQSNRLTELPRTIGMLQSLIHLAVGENDLQRLPPEIGDLHKLETLYLNDNP 533

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPY 579
            LN++P EL +C +LQIMS++NCPLSQIP E+  GGPSL+I+YL++QG +
Sbjct: 534 NLNDLPTELGMCFSLQIMSIENCPLSQIPVEVTAGGPSLVIQYLRLQGSF 583


>gi|20071327|gb|AAH26364.1| Shoc2 protein [Mus musculus]
          Length = 524

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 294/500 (58%), Positives = 373/500 (74%), Gaps = 12/500 (2%)

Query: 22  ASYREESSTALLNSDSSRSDEYGYFEDMPEKDNKK------CGVDVKKTVTVKHPESNKP 75
           A  RE+ S A         ++    +    KD KK       GV      T+K P    P
Sbjct: 21  AKEREKESKASGGFGKESKEKEPKAKGRDAKDGKKESSAAQPGVAFSVDNTIKRPN---P 77

Query: 76  KPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNK 135
            P T+KK    ++  + KE  +C+EEN + LDLSK SI  LPPSV++LT L ELYLY NK
Sbjct: 78  APGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILPPSVKELTQLTELYLYSNK 134

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDLRHNKL E+P VVY+L SL
Sbjct: 135 LQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSL 194

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
             LYLRFNRI TV  DI+ L  LSMLS+R+NKI++LP E+GEL NL+TLD+AHN LE LP
Sbjct: 195 TTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLP 254

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
           KEIGNCT +  LDLQHN+L+++PD +GNL +L RL L YNRL ++P +L+KC  L E N+
Sbjct: 255 KEIGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNL 314

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
           E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF+++YS+N EHN+I+KIP+GI
Sbjct: 315 ENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGI 374

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
           FSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K+ ED+  LV+LEVL+LSN
Sbjct: 375 FSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSN 434

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           NLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L+L +NQL +LPR IGHLT
Sbjct: 435 NLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLT 494

Query: 496 NLSYLSVGENNLQSIPEEIG 515
           NL++L +GEN L  +PEEIG
Sbjct: 495 NLTHLGLGENLLTHLPEEIG 514



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 103/184 (55%), Gaps = 1/184 (0%)

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           R +N  ++++    +  LP  +     LTEL L +N++  L  ++  LVNL  L LS N 
Sbjct: 98  REENSMRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENS 157

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L  LP S+ NL+KL+ LDL  NKL  +P+ +  L  L  L L+ N++ ++ + I +L  L
Sbjct: 158 LTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKL 217

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
           S LS+ EN ++ +P EIG L NL TL +  N  L ++P E+  C+ +  + L +  L  +
Sbjct: 218 SMLSIRENKIKQLPAEIGELCNLITLDVAHNQ-LEHLPKEIGNCTQITNLDLQHNDLLDL 276

Query: 558 PSEI 561
           P  I
Sbjct: 277 PDTI 280



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 121/277 (43%), Gaps = 72/277 (25%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT- 160
           N++ LD++ + + HLP  +   T +  L L  N L  LP  IG +++L  LGL  N L+ 
Sbjct: 239 NLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSA 298

Query: 161 ----------------------SLPDSL-------------------------ANLQQLR 173
                                 +LP+SL                         +    + 
Sbjct: 299 IPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIY 358

Query: 174 VLDLRHNKLNELPMVVY--------------KLTSLKI----------LYLRFNRIKTVH 209
            L++ HN++N++P  ++              +LTSL +          L L  N++  + 
Sbjct: 359 SLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIP 418

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
            D+  L +L +L + +N +++LP  LG L+ L  LDL  N LE LP EI     L  L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK 306
            +N+L  +P  +G+L NLT L L  N L  +PE + +
Sbjct: 479 TNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGR 515


>gi|148669768|gb|EDL01715.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_a
           [Mus musculus]
          Length = 524

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 286/465 (61%), Positives = 362/465 (77%), Gaps = 6/465 (1%)

Query: 51  EKDNKKCGVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSK 110
           E    + GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK
Sbjct: 56  ESSAAQPGVAFSVDNTIKRPN---PAPGTRKK---SSNAEVIKELNKCREENSMRLDLSK 109

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
            SI  LPPSV++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL+
Sbjct: 110 RSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLK 169

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           +LR+LDLRHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ L  LSMLS+R+NKI++
Sbjct: 170 KLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQ 229

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+GEL NL+TLD+AHN LE LPKEIGNCT +  LDLQHN+L+++PD +GNL +L RL
Sbjct: 230 LPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRL 289

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L YNRL ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP G
Sbjct: 290 GLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVG 349

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
           GP+QF+++YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL
Sbjct: 350 GPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNL 409

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
            TNQ++K+ ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +
Sbjct: 410 ATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAY 469

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           LK+LQ+L+L +NQL +LPR IGHLTNL++L +GEN L  +PEEIG
Sbjct: 470 LKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIG 514



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 103/184 (55%), Gaps = 1/184 (0%)

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           R +N  ++++    +  LP  +     LTEL L +N++  L  ++  LVNL  L LS N 
Sbjct: 98  REENSMRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENS 157

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L  LP S+ NL+KL+ LDL  NKL  +P+ +  L  L  L L+ N++ ++ + I +L  L
Sbjct: 158 LTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKL 217

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
           S LS+ EN ++ +P EIG L NL TL +  N  L ++P E+  C+ +  + L +  L  +
Sbjct: 218 SMLSIRENKIKQLPAEIGELCNLITLDVAHNQ-LEHLPKEIGNCTQITNLDLQHNDLLDL 276

Query: 558 PSEI 561
           P  I
Sbjct: 277 PDTI 280



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 121/277 (43%), Gaps = 72/277 (25%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT- 160
           N++ LD++ + + HLP  +   T +  L L  N L  LP  IG +++L  LGL  N L+ 
Sbjct: 239 NLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSA 298

Query: 161 ----------------------SLPDSL-------------------------ANLQQLR 173
                                 +LP+SL                         +    + 
Sbjct: 299 IPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIY 358

Query: 174 VLDLRHNKLNELPMVVY--------------KLTSLKI----------LYLRFNRIKTVH 209
            L++ HN++N++P  ++              +LTSL +          L L  N++  + 
Sbjct: 359 SLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIP 418

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
            D+  L +L +L + +N +++LP  LG L+ L  LDL  N LE LP EI     L  L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK 306
            +N+L  +P  +G+L NLT L L  N L  +PE + +
Sbjct: 479 TNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGR 515



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 5/74 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL ++ +  LP  +  L  L++L L  N+L++LP  IG++TNLT LGL EN LT LP+ 
Sbjct: 453 LDLEENKLESLPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEE 512

Query: 166 LANLQQLRVLDLRH 179
           +      R L +RH
Sbjct: 513 IG-----RNLRVRH 521


>gi|149040409|gb|EDL94447.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_b
           [Rattus norvegicus]
          Length = 524

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 295/527 (55%), Positives = 380/527 (72%), Gaps = 16/527 (3%)

Query: 2   KTNKPKARSSSESRIAAERLASYREESSTALLNSDSSRSDEYGYFEDMPEKDNKKCGVDV 61
           K   PK  S+ E    A+    + +ES          ++      +   E    + GV  
Sbjct: 12  KEKDPKVPSAKEREKEAKASGGFGKESK-----EKEPKTKGKDAKDGKKESSAAQPGVAF 66

Query: 62  KKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVE 121
               T+K P    P   T+KK    ++  + KE  +C+EEN + LDLSK SI  LPPSV+
Sbjct: 67  SVDNTIKRP---NPALGTRKK---SSNAEVTKELNKCREENSMRLDLSKRSIHILPPSVK 120

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
           +LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDLRHNK
Sbjct: 121 ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK 180

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L E+P VVY+L SL  LYLRFNRI  V  D++ L  LS LS+R+NKI++LP E+GEL NL
Sbjct: 181 LREIPSVVYRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLPAEIGELCNL 240

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
           +TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L RL L YNRL ++P
Sbjct: 241 ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIP 300

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
            +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF+++YS+
Sbjct: 301 RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL 360

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
           N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K+ ED
Sbjct: 361 NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED 420

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           +  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L+L +
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           NQL +LPR IGHLTNL++L +GEN L  +PEEIG L     L++ DN
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGRL-----LWMQDN 522



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 98/208 (47%), Gaps = 24/208 (11%)

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           R +N  ++++    +  LP  +     LTEL L +N++  L  ++  LVNL  L LS N 
Sbjct: 98  REENSMRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENS 157

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS----------- 486
           L  LP S+ NL+KL+ LDL  NKL  +P+ +  L  L  L L+ N++ +           
Sbjct: 158 LTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITAVEKDVRNLPRL 217

Query: 487 ------------LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
                       LP  IG L NL  L V  N L+ +P+EIG    +  L L  N  L ++
Sbjct: 218 STLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELL-DL 276

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEIV 562
           P  +   S+L  + L    LS IP  + 
Sbjct: 277 PDTIGNLSSLNRLGLRYNRLSAIPRSLA 304


>gi|71981160|ref|NP_741391.2| Protein SOC-2, isoform b [Caenorhabditis elegans]
 gi|351065206|emb|CCD61152.1| Protein SOC-2, isoform b [Caenorhabditis elegans]
          Length = 558

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 288/526 (54%), Positives = 383/526 (72%), Gaps = 3/526 (0%)

Query: 58  GVDVKKTVTVKHPESNKP---KPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSIT 114
           GV   K V+V   + ++    +    +     A+ ++ KEF +CKE     LDLS   IT
Sbjct: 26  GVSATKRVSVIATDRDRAYFLRQKNMRNNKGHAEKDLLKEFHKCKEAQDQRLDLSSIEIT 85

Query: 115 HLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRV 174
            +P  +++LT L EL+LY NKL  LP++IG + NL  LGL+EN+LTSLPDSLA+L+ L  
Sbjct: 86  SIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLET 145

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           LDLRHNKL E+P V+YK+ SL+ L+LR+NRI  V   I  LS L ML +R+NKIRELP  
Sbjct: 146 LDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSA 205

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
           +G+L +LV   +++NHL  +P+EIG+C  L  LDLQHN+L  +P  +G L+NL R+ + Y
Sbjct: 206 IGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRY 265

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
           N++  +P  L  C  L EF VE   L  LP  LL+ L  I+ + LSRN+ TA+P+GGP Q
Sbjct: 266 NKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQ 325

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
           F S  +IN EHNQI KIP GIFS+A  L+K+N+K+N L SLPLD+G+W  +TELNL TNQ
Sbjct: 326 FVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQ 385

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +  L EDI+ LVNLE+LVLSNN LKKLP+ IGNL KL+ LDLEEN+LE++P EIGFL+ L
Sbjct: 386 LKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHL 445

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
            +L +QSN++++LPR+IG+L +L  L +GENNL +IPEEIG L++L +LYLNDN+ L+N+
Sbjct: 446 TKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHNL 505

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYR 580
           PFELALC +L+IMS++N PLSQIP EI  GGPSL+I+YLKMQGPYR
Sbjct: 506 PFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGPYR 551


>gi|341884210|gb|EGT40145.1| hypothetical protein CAEBREN_23247 [Caenorhabditis brenneri]
          Length = 559

 Score =  543 bits (1399), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 283/488 (57%), Positives = 367/488 (75%)

Query: 93  KEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCL 152
           KEF +CKE     LDLS   IT +P  +++LT L EL+LY NKL  LP++IG + NL  L
Sbjct: 65  KEFHKCKEAQDQRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKL 124

Query: 153 GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
           GL+EN+LTSLPDSLA+L+ L  LDLRHNKL E+P V+YK+TSL+ L+LR+NRI  V   I
Sbjct: 125 GLSENALTSLPDSLASLESLETLDLRHNKLTEVPPVIYKITSLETLWLRYNRIVAVDEQI 184

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L  L ML +R+NKIRELP  +G+L +LV   +++NHL  +P+EIG C  L  LDLQHN
Sbjct: 185 GNLVKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECQSLTQLDLQHN 244

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
           +L  +P  +G L +L R+ + YN++  +P  L  C  L EF VE   L  LP  LL+ L 
Sbjct: 245 DLSELPYSIGKLTSLVRIGIRYNKIRCIPSELENCQQLEEFIVESNHLQLLPPNLLTMLP 304

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            I+ + LSRN+ TA+P+GGP QF S  +IN EHNQI KIP GIFS+A  L+K+N+K+N L
Sbjct: 305 KIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENEL 364

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
            SLPLD+G+W  +TELNL TNQ+  L EDI+ LVNLE+LVLSNN LKKLP+ IGNL+KL+
Sbjct: 365 VSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLKKLR 424

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
            LDLEEN+LE++P EIGFL+ L +L +QSN++VSLPR+IG+L +L  L +GENNL +IPE
Sbjct: 425 ELDLEENELETVPTEIGFLQHLTKLWVQSNKIVSLPRSIGNLCSLQDLRLGENNLTAIPE 484

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRY 572
           EIG L++L +LYLNDN+ L+N+PFELALC +L+IMS++N PLSQIP EI  GGPSL+I+Y
Sbjct: 485 EIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQY 544

Query: 573 LKMQGPYR 580
           LKMQGPYR
Sbjct: 545 LKMQGPYR 552


>gi|71981152|ref|NP_001021259.1| Protein SOC-2, isoform a [Caenorhabditis elegans]
 gi|74966395|sp|Q22875.3|SHOC2_CAEEL RecName: Full=Leucine-rich repeat protein soc-2; AltName:
           Full=Suppressor of Clr protein 2; AltName:
           Full=Suppressor of activated let-60 Ras protein 8
 gi|3252977|gb|AAC39129.1| Ras-binding protein SUR-8 [Caenorhabditis elegans]
 gi|3293318|gb|AAC25697.1| leucine-rich repeat protein SOC-2 [Caenorhabditis elegans]
 gi|351065205|emb|CCD61151.1| Protein SOC-2, isoform a [Caenorhabditis elegans]
          Length = 559

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 282/488 (57%), Positives = 368/488 (75%)

Query: 93  KEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCL 152
           KEF +CKE     LDLS   IT +P  +++LT L EL+LY NKL  LP++IG + NL  L
Sbjct: 65  KEFHKCKEAQDQRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKL 124

Query: 153 GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
           GL+EN+LTSLPDSLA+L+ L  LDLRHNKL E+P V+YK+ SL+ L+LR+NRI  V   I
Sbjct: 125 GLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQI 184

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             LS L ML +R+NKIRELP  +G+L +LV   +++NHL  +P+EIG+C  L  LDLQHN
Sbjct: 185 GNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHN 244

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
           +L  +P  +G L+NL R+ + YN++  +P  L  C  L EF VE   L  LP  LL+ L 
Sbjct: 245 DLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLP 304

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            I+ + LSRN+ TA+P+GGP QF S  +IN EHNQI KIP GIFS+A  L+K+N+K+N L
Sbjct: 305 KIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENEL 364

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
            SLPLD+G+W  +TELNL TNQ+  L EDI+ LVNLE+LVLSNN LKKLP+ IGNL KL+
Sbjct: 365 VSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLR 424

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
            LDLEEN+LE++P EIGFL+ L +L +QSN++++LPR+IG+L +L  L +GENNL +IPE
Sbjct: 425 ELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPE 484

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRY 572
           EIG L++L +LYLNDN+ L+N+PFELALC +L+IMS++N PLSQIP EI  GGPSL+I+Y
Sbjct: 485 EIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQY 544

Query: 573 LKMQGPYR 580
           LKMQGPYR
Sbjct: 545 LKMQGPYR 552


>gi|308451071|ref|XP_003088533.1| hypothetical protein CRE_29288 [Caenorhabditis remanei]
 gi|308478403|ref|XP_003101413.1| hypothetical protein CRE_13532 [Caenorhabditis remanei]
 gi|308246970|gb|EFO90922.1| hypothetical protein CRE_29288 [Caenorhabditis remanei]
 gi|308263314|gb|EFP07267.1| hypothetical protein CRE_13532 [Caenorhabditis remanei]
          Length = 559

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 280/488 (57%), Positives = 366/488 (75%)

Query: 93  KEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCL 152
           KEF +CKE     LDLS   IT +P  +++LT L EL+LY NKL  LP++IG + NL  L
Sbjct: 65  KEFHKCKEAQDQRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKL 124

Query: 153 GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
           GL+EN+L+SLPDSLA+L+ L  LDLRHNKL E+P V+YK+ SL+ L+LR+NRI  V   I
Sbjct: 125 GLSENALSSLPDSLASLESLETLDLRHNKLTEVPSVIYKINSLETLWLRYNRIVAVDEQI 184

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L  L ML +R+NKIRELP  +G+L +LV   +++NHL  +P+EIG C  L  LDLQHN
Sbjct: 185 GNLVKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECLSLTQLDLQHN 244

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
           +L  +P  +G L NL R+ + YN++  +P  L  C  L EF VE   L  LP  LL+ L 
Sbjct: 245 DLSELPYSIGKLTNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLP 304

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            I+ + LSRN+ TA+P+GGP QF S  +IN EHNQI KIP GIFS+A  L+K+N+K+N L
Sbjct: 305 KIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENEL 364

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
            SLPLD+G+W  +TELNL TNQ+  L EDI+ LVNLE+LVLSNN LKKLP+ IGNL+KL+
Sbjct: 365 VSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLKKLR 424

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
            LDLEEN+LE++P EIGFL+ L +L +QSN++++LPR+IG+L +L  L +GENNL +IPE
Sbjct: 425 ELDLEENELETVPTEIGFLQHLTKLWIQSNKIITLPRSIGNLCSLQDLRLGENNLTAIPE 484

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRY 572
           EIG L++L +LYLNDN+ L+N+PFELALC +L+IMS++N PLSQIP EI  GGPSL+I+Y
Sbjct: 485 EIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQY 544

Query: 573 LKMQGPYR 580
           LKMQGPYR
Sbjct: 545 LKMQGPYR 552


>gi|340375357|ref|XP_003386202.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Amphimedon
           queenslandica]
          Length = 635

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 276/523 (52%), Positives = 366/523 (69%), Gaps = 4/523 (0%)

Query: 64  TVTVKHPESNKPKP---TTKKKEPIQA-DLNIEKEFLRCKEENILNLDLSKSSITHLPPS 119
           T+ V   E  KPKP     K K+ +QA   +I+K+  +CKEE  + LDLSKS I  LP +
Sbjct: 112 TLMVPEGEGEKPKPGGVKGKDKKSVQAPTADIKKKISKCKEEKSIILDLSKSDIAVLPGN 171

Query: 120 VEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRH 179
           +++++ +EELYLYGN++++LP ++G +  L  L L EN LT LP+ L     L VLDLRH
Sbjct: 172 IKEVSFIEELYLYGNRVSTLPPEVGNLKKLRKLALNENMLTDLPNELKQCVSLSVLDLRH 231

Query: 180 NKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELK 239
           NKL E+P VV +L SL+ LYLRFN+I +V+P I  L NL+ L +R+NKIR+LP  +G L 
Sbjct: 232 NKLREVPPVVCELASLQTLYLRFNKIVSVNPAIGNLRNLTSLILRENKIRDLPSTIGSLT 291

Query: 240 NLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLES 299
            L  LD++HNHLE LP EI NC+ L  L LQHN+L  +P  +GNL +L RL L YN+L  
Sbjct: 292 RLTALDVSHNHLESLPDEIANCSQLSFLQLQHNDLTELPVAIGNLKSLKRLGLQYNQLSE 351

Query: 300 VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVY 359
           +P +L  C  LNE  +E   L+SLPD L  S+T ++NI LSRN FT++P   P+   SV 
Sbjct: 352 LPPSLCSCTELNEIGLESNTLTSLPDQLFGSVTKMSNIQLSRNSFTSFPISDPSHLVSVN 411

Query: 360 SINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS 419
           S+  EHN I K+P GIFS+A  L++++++DN +T+LPLD GTWV LTELNLGTNQ+S + 
Sbjct: 412 SLMIEHNHITKVPLGIFSQATELTQLSLRDNQITTLPLDFGTWVTLTELNLGTNQLSSIP 471

Query: 420 EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLIL 479
           E+IQ L  LE+LVL+NN ++ LP  I  LR LK LDLE NKLE L  EI +L+EL +L +
Sbjct: 472 EEIQELTRLEILVLANNTIRTLPKGISALRNLKELDLEGNKLEYLATEISYLRELTKLNV 531

Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
           QSN++ +LPR +G L NL +LS GENNL  IP EIGTLENL  LYLNDN  L  +P+ELA
Sbjct: 532 QSNRITNLPRGLGLLVNLKHLSAGENNLLEIPAEIGTLENLEELYLNDNPNLQFLPYELA 591

Query: 540 LCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LC  L +MS++ CPLS++P  +V GGPS II++LK QGPYR +
Sbjct: 592 LCKRLALMSVEGCPLSRLPPHVVDGGPSAIIQHLKFQGPYRGL 634


>gi|444709489|gb|ELW50501.1| Leucine-rich repeat protein SHOC-2 [Tupaia chinensis]
          Length = 535

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 294/583 (50%), Positives = 377/583 (64%), Gaps = 62/583 (10%)

Query: 2   KTNKPKARSSSESRIAAERLASYREESSTALLNSDSSRSDEYGYFEDMPEKDNKKC--GV 59
           K   PK  S+ E    A+    + +ES      +  +  D         +KD+     GV
Sbjct: 12  KEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGNTKDG--------KKDSSAAQPGV 63

Query: 60  DVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPS 119
                 T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP S
Sbjct: 64  AFSVDNTIKRPN---PAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILPTS 117

Query: 120 VEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRH 179
           +++LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDLRH
Sbjct: 118 IKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRH 177

Query: 180 NKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELK 239
           NKL E+P VVY+L SL  LYLRFNRI TV  DI+ L  L MLS+R+NKI++LP E+GEL 
Sbjct: 178 NKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLIMLSIRENKIKQLPAEIGELC 237

Query: 240 NLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLES 299
           NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L RL L YNRL +
Sbjct: 238 NLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLCSLNRLGLRYNRLSA 297

Query: 300 VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVY 359
           +P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF+++Y
Sbjct: 298 IPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIY 357

Query: 360 SINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS 419
           S+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K+ 
Sbjct: 358 SLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIP 417

Query: 420 EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLIL 479
           ED+  L++LE LVL+NN L  LP  IG+L  L  L L EN L  LP EIG L+ L+ L L
Sbjct: 418 EDVSGLISLEKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYL 477

Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
             N                       NL S+P E+                        A
Sbjct: 478 NDNP----------------------NLHSLPFEL------------------------A 491

Query: 540 LCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 492 LCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 534


>gi|268551887|ref|XP_002633925.1| C. briggsae CBR-SOC-2 protein [Caenorhabditis briggsae]
 gi|261277879|sp|A8XWW4.1|SHOC2_CAEBR RecName: Full=Leucine-rich repeat protein soc-2; AltName:
           Full=Suppressor of Clr protein 2; AltName:
           Full=Suppressor of activated let-60 Ras protein 8
          Length = 559

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 280/488 (57%), Positives = 366/488 (75%)

Query: 93  KEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCL 152
           KEF +CKE     LDLS   IT +P  +++LT L EL+LY NKL  LP++IG + NL  L
Sbjct: 65  KEFHKCKEAQDQRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKL 124

Query: 153 GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
           GL+EN+L+SLPDSL++L+ L  LDLRHNKL E+P V+YK+TSL+ L+LR+NRI  V   I
Sbjct: 125 GLSENALSSLPDSLSSLESLETLDLRHNKLTEVPAVIYKITSLETLWLRYNRIVAVDEQI 184

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L  L ML +R+NKIRELP  +G+L +LV   +++NHL  +P+EIG C  L  LDLQHN
Sbjct: 185 GNLQKLKMLDVRENKIRELPSAIGKLSSLVVCLVSYNHLTRVPEEIGECHALTQLDLQHN 244

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
           +L  +P  +G L NL R+ + YN++  +P  L  C  L EF VE   L  LP  LL+ L 
Sbjct: 245 DLSELPYSIGKLTNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLP 304

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            I+ + LSRN+ TA+P+GGP QF    +IN EHNQI KIP GIFS+A  L+K+N+K+N L
Sbjct: 305 KIHTVNLSRNELTAFPAGGPQQFVPTVTINMEHNQISKIPIGIFSKATRLTKLNLKENEL 364

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
            SLPLD+G+W  +TELNL TNQ+  L EDI+ LVNLE+LVLSNN LKKLP+ IGNL+KL+
Sbjct: 365 VSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLKKLR 424

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
            LDLEEN+LE++P EIGFL+ L +L +QSN++V+LPR+IG+L +L  L +GENNL +IPE
Sbjct: 425 ELDLEENELETVPTEIGFLQHLTKLWVQSNKIVTLPRSIGNLCSLQDLRLGENNLTAIPE 484

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRY 572
           EIG L++L +LYLNDN+ L+N+PFELALC +L+IMS++N PLSQIP EI  GGPSL+I+Y
Sbjct: 485 EIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQY 544

Query: 573 LKMQGPYR 580
           LKMQGPYR
Sbjct: 545 LKMQGPYR 552


>gi|449678559|ref|XP_002158634.2| PREDICTED: leucine-rich repeat protein soc-2 homolog [Hydra
           magnipapillata]
          Length = 499

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 274/489 (56%), Positives = 362/489 (74%), Gaps = 10/489 (2%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           I K  ++CKEE+   L+LSK            LT L +L+LYGNK++ LP +IG + NL 
Sbjct: 13  IVKGLMKCKEESSKMLNLSKLG----------LTGLTQLFLYGNKISKLPPEIGLLVNLE 62

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L ENS++SLP  + N ++L++LDLRHNK+ E+P V+Y L SLK L LRFNR+ TV P
Sbjct: 63  TLLLNENSISSLPAEIVNCKKLQMLDLRHNKIKEIPPVLYSLVSLKQLLLRFNRLTTVEP 122

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           +I  L++L+MLS+R+N+++ +P  +G LK+LVTLDLA NHLE LP EIG C  + TLDL 
Sbjct: 123 EIGNLTHLTMLSLRENRLKHIPDTIGNLKSLVTLDLAKNHLESLPPEIGKCIEMNTLDLA 182

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HNEL ++PD +G L  L+RL L YN+L S+P ++ +C  L E N+E   +SSLP GLL S
Sbjct: 183 HNELRDLPDSIGKLTALSRLGLRYNQLTSLPSSICQCTLLQEINIESNGISSLPSGLLLS 242

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
               ++ITLSRN+F  +PS GP QF SV S+ F+HN+I KIP+GIFS+A+ L+K+N+KDN
Sbjct: 243 SKLCDSITLSRNEFENFPSDGPKQFASVTSLVFDHNKIKKIPFGIFSKAQFLTKLNLKDN 302

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
           L+  LPLD GTW  L ELNLGTNQ++ L +DI+ LVNLEVL+LSNN LK++P SIGNLRK
Sbjct: 303 LIAELPLDFGTWANLDELNLGTNQLTVLPDDIKWLVNLEVLILSNNQLKRIPRSIGNLRK 362

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L+ LDL+EN LE LPNEI +LK L++L+LQSN+L +LP  IGHL  LSYLSVGEN+L  +
Sbjct: 363 LRVLDLDENNLECLPNEIEYLKSLEKLLLQSNKLTTLPATIGHLKKLSYLSVGENDLTVL 422

Query: 511 PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLII 570
           P EIG LE+L  L+LNDN  L+ +P  L LC NL IM++D CPLS +P EIV  GPS++I
Sbjct: 423 PPEIGALESLEQLFLNDNKNLHALPHTLVLCQNLTIMNIDACPLSSLPQEIVANGPSVVI 482

Query: 571 RYLKMQGPY 579
           +YL+ +GPY
Sbjct: 483 QYLRFEGPY 491


>gi|25396047|pir||A88684 protein AC7.2 [imported] - Caenorhabditis elegans
          Length = 613

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 262/462 (56%), Positives = 343/462 (74%), Gaps = 13/462 (2%)

Query: 132 YGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL-----P 186
           + NKL  LP++IG + NL  LGL+EN+LTSLPDSLA+L+ L  LDLRHNKL E+     P
Sbjct: 145 FQNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVIFLQVP 204

Query: 187 MVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDL 246
            V+YK+ SL+ L+LR+NRI  V   I  LS L ML +R+NKIRELP  +G+L +LV   +
Sbjct: 205 SVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLV 264

Query: 247 AHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK 306
           ++NHL  +P+EIG+C  L  LDLQHN+L  +P  +G L+NL R+ + YN++  +P  L  
Sbjct: 265 SYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELES 324

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
           C  L EF VE   L  LP  LL+ L  I+ + LSRN+ TA+P+GGP QF S  +IN EHN
Sbjct: 325 CQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHN 384

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
           QI KIP GIFS+A  L+K+N+K+N L SLPLD+G+W  +TELNL TNQ+  L EDI+ LV
Sbjct: 385 QISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLV 444

Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
           NLE+LVLSNN LKKLP+ IGNL KL+ LDLEEN+LE++P EIGFL+ L +L +QSN++++
Sbjct: 445 NLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILT 504

Query: 487 LPRAIGHLTNLSYLSVGENNLQSIPEEIGT--------LENLHTLYLNDNTCLNNIPFEL 538
           LPR+IG+L +L  L +GENNL +IPEEIG         L++L +LYLNDN+ L+N+PFEL
Sbjct: 505 LPRSIGNLCSLQDLRLGENNLTAIPEEIGEFLVHISSHLDSLKSLYLNDNSSLHNLPFEL 564

Query: 539 ALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYR 580
           ALC +L+IMS++N PLSQIP EI  GGPSL+I+YLKMQGPYR
Sbjct: 565 ALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGPYR 606



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 186/398 (46%), Gaps = 61/398 (15%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L  + I  +   +  L+ L+ L +  NK+  LPS IG +T+L    ++ N LT +P+ 
Sbjct: 216 LWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEE 275

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + +   L  LDL+HN L+ELP  + KL +L  + +R+N+I+ +  +++    L    +  
Sbjct: 276 IGDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVES 335

Query: 226 NKIRELPPEL-------------------------GELKNLVTLDLAHNHLEELPKEI-G 259
           N ++ LPP L                          +  + VT+++ HN + ++P  I  
Sbjct: 336 NHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFS 395

Query: 260 NCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA 319
             T L  L+L+ NELV++P  +G+  ++T L LS N+L+ +PE + K V+L    +    
Sbjct: 396 KATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQ 455

Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           L  LP+        I N+    NK            T    I F                
Sbjct: 456 LKKLPN-------QIGNL----NKLRELDLEENELETVPTEIGF---------------L 489

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI--------QNLVNLEVL 431
           ++L+K+ ++ N + +LP  +G    L +L LG N ++ + E+I         +L +L+ L
Sbjct: 490 QHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGEFLVHISSHLDSLKSL 549

Query: 432 VLSNN-LLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
            L++N  L  LP  +   + L+ + +E + L  +P EI
Sbjct: 550 YLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEI 587



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 9/189 (4%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K   +  L+L ++ +  LP  +   T + EL L  N+L  LP  I  + NL  L L+ N 
Sbjct: 396 KATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQ 455

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP+ + NL +LR LDL  N+L  +P  +  L  L  L+++ N+I T+   I  L +L
Sbjct: 456 LKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSL 515

Query: 219 SMLSMRDNKIRELPPELGE--------LKNLVTLDLAHN-HLEELPKEIGNCTMLVTLDL 269
             L + +N +  +P E+GE        L +L +L L  N  L  LP E+  C  L  + +
Sbjct: 516 QDLRLGENNLTAIPEEIGEFLVHISSHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSI 575

Query: 270 QHNELVNIP 278
           +++ L  IP
Sbjct: 576 ENSPLSQIP 584


>gi|256072891|ref|XP_002572767.1| shoc2 [Schistosoma mansoni]
 gi|360043065|emb|CCD78477.1| putative shoc2 [Schistosoma mansoni]
          Length = 532

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 255/472 (54%), Positives = 343/472 (72%), Gaps = 9/472 (1%)

Query: 62  KKTVTVKHPESNKP---KPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPP 118
           K  VTV+ P   K     P  +K +  + D +  KE  RC+EEN   LDL+K  +  LPP
Sbjct: 62  KVKVTVQRPGDQKAYQCGPHLRKTK--KTDSDAIKEINRCREENTTRLDLTKGQLHFLPP 119

Query: 119 SVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
           S+  + H L+ELYLY NKL +LP++IG +  L  L + ENSL+ LP++LA   QLRVLD+
Sbjct: 120 SIRDVAHHLKELYLYCNKLVNLPNEIGTLFALEILMVQENSLSDLPETLAQCTQLRVLDI 179

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP--PEL 235
           RHNKL E+P VVYKL +L  L+LRFNRI+ V  +I+YL+ L +LS+R+NKI  LP  P +
Sbjct: 180 RHNKLCEIPQVVYKLHNLTHLFLRFNRIRVVDEEIKYLTKLQVLSLRENKIHTLPADPGI 239

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
           G+L NL+TLD++HNHLE+L ++IG+C  L TL LQHNEL ++P+ +G+L  L  + L YN
Sbjct: 240 GQLTNLITLDVSHNHLEQLSEKIGHCQKLCTLSLQHNELRSLPNTIGDLKMLENIGLKYN 299

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
            LES+P++L+ C +L E N+EG  +  LP+GLL+ L  ++ +TLSRN F  +PSGGP QF
Sbjct: 300 HLESLPDSLALCTNLLELNIEGNNIWQLPEGLLTHLKKVSCVTLSRNYFNIFPSGGPQQF 359

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
           TS+ S+N E+NQI +IP+GIFSRA NL+K+NMKDN + + P D+ +W  L ELN+GTNQ+
Sbjct: 360 TSIQSLNMEYNQITRIPFGIFSRASNLTKLNMKDNQIGAFPPDIKSWTSLVELNVGTNQL 419

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           +KL +DI+ L+NLEVL+LSNN LK++P +I  L+KL+ LDLEEN LESLP +IG+L ELQ
Sbjct: 420 TKLPDDIEYLINLEVLILSNNQLKQIPVTIRELQKLQVLDLEENHLESLPPDIGYLGELQ 479

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI-GTLENLHTLYLN 526
           RL++QSN+L SLPR IG L NL YL+VGEN LQSIP EI  T   L   Y+N
Sbjct: 480 RLVVQSNRLTSLPREIGRLYNLIYLAVGENELQSIPNEIVSTSTGLFQSYIN 531



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 166/349 (47%), Gaps = 30/349 (8%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           +L  L +  NK+  LP E+G L  L  L +  N L +LP+ +  CT L  LD++HN+L  
Sbjct: 127 HLKELYLYCNKLVNLPNEIGTLFALEILMVQENSLSDLPETLAQCTQLRVLDIRHNKLCE 186

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           IP ++  L NLT L L +NR+  V E +                          LT +  
Sbjct: 187 IPQVVYKLHNLTHLFLRFNRIRVVDEEIK------------------------YLTKLQV 222

Query: 337 ITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
           ++L  NK    P+  G  Q T++ +++  HN ++++   I    + L  ++++ N L SL
Sbjct: 223 LSLRENKIHTLPADPGIGQLTNLITLDVSHNHLEQLSEKI-GHCQKLCTLSLQHNELRSL 281

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI-GNLRKLKCL 454
           P  +G    L  + L  N +  L + +    NL  L +  N + +LP  +  +L+K+ C+
Sbjct: 282 PNTIGDLKMLENIGLKYNHLESLPDSLALCTNLLELNIEGNNIWQLPEGLLTHLKKVSCV 341

Query: 455 DLEENKLESLPNE-IGFLKELQRLILQSNQLVSLPRAI-GHLTNLSYLSVGENNLQSIPE 512
            L  N     P+        +Q L ++ NQ+  +P  I    +NL+ L++ +N + + P 
Sbjct: 342 TLSRNYFNIFPSGGPQQFTSIQSLNMEYNQITRIPFGIFSRASNLTKLNMKDNQIGAFPP 401

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +I +  +L  L +  N  L  +P ++    NL+++ L N  L QIP  I
Sbjct: 402 DIKSWTSLVELNVGTNQ-LTKLPDDIEYLINLEVLILSNNQLKQIPVTI 449



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 128/240 (53%), Gaps = 3/240 (1%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQI-GYVTNLTCLGLAENSLTSLP 163
           N+ L  + +  LP S+   T+L EL + GN +  LP  +  ++  ++C+ L+ N     P
Sbjct: 293 NIGLKYNHLESLPDSLALCTNLLELNIEGNNIWQLPEGLLTHLKKVSCVTLSRNYFNIFP 352

Query: 164 DSL-ANLQQLRVLDLRHNKLNELPMVVY-KLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
                    ++ L++ +N++  +P  ++ + ++L  L ++ N+I    PDI+  ++L  L
Sbjct: 353 SGGPQQFTSIQSLNMEYNQITRIPFGIFSRASNLTKLNMKDNQIGAFPPDIKSWTSLVEL 412

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++  N++ +LP ++  L NL  L L++N L+++P  I     L  LDL+ N L ++P  +
Sbjct: 413 NVGTNQLTKLPDDIEYLINLEVLILSNNQLKQIPVTIRELQKLQVLDLEENHLESLPPDI 472

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  L RL +  NRL S+P  + +  +L    V    L S+P+ ++S+ T +    ++R
Sbjct: 473 GYLGELQRLVVQSNRLTSLPREIGRLYNLIYLAVGENELQSIPNEIVSTSTGLFQSYINR 532



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 24/222 (10%)

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
           ++    Q+  +P  I   A +L ++ +  N L +LP ++GT   L  L +  N +S L E
Sbjct: 107 LDLTKGQLHFLPPSIRDVAHHLKELYLYCNKLVNLPNEIGTLFALEILMVQENSLSDLPE 166

Query: 421 DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQ 480
            +     L VL + +N L ++P  +  L  L  L L  N++  +  EI +L +LQ L L+
Sbjct: 167 TLAQCTQLRVLDIRHNKLCEIPQVVYKLHNLTHLFLRFNRIRVVDEEIKYLTKLQVLSLR 226

Query: 481 SNQLVSLPR--AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC-------- 530
            N++ +LP    IG LTNL  L V  N+L+ + E+IG  + L TL L  N          
Sbjct: 227 ENKIHTLPADPGIGQLTNLITLDVSHNHLEQLSEKIGHCQKLCTLSLQHNELRSLPNTIG 286

Query: 531 --------------LNNIPFELALCSNLQIMSLDNCPLSQIP 558
                         L ++P  LALC+NL  ++++   + Q+P
Sbjct: 287 DLKMLENIGLKYNHLESLPDSLALCTNLLELNIEGNNIWQLP 328


>gi|426253114|ref|XP_004020245.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Ovis
           aries]
          Length = 536

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 276/581 (47%), Positives = 363/581 (62%), Gaps = 57/581 (9%)

Query: 2   KTNKPKARSSSESRIAAERLASYREESSTALLNSDSSRSDEYGYFEDMPEKDNKKCGVDV 61
           K   PKA S+ E    A+    + +ES          ++      +   +    + GV  
Sbjct: 12  KEKDPKAPSAKEREKEAKASGGFGKES-----KEKEPKTKGKDAKDGKKDSSAAQPGVAF 66

Query: 62  KKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVE 121
               T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI        
Sbjct: 67  SVDNTIKRPN---PAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSI-------- 112

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
              H+            LPS I  +T LT L L  N L SLP  +  L  L  L L  N 
Sbjct: 113 ---HI------------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENS 157

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L  LP                         +  L  L ML +R NK+RE+P  +  L +L
Sbjct: 158 LTSLP-----------------------DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSL 194

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
            TL L  N +  + K+I N + L  L ++ N++  +P  +GNL +L+RL L YNRL ++P
Sbjct: 195 TTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGNLSSLSRLGLRYNRLSAIP 254

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
            +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF+++YS+
Sbjct: 255 RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL 314

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
           N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K+ ED
Sbjct: 315 NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED 374

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           +  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L+L +
Sbjct: 375 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 434

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFELALC
Sbjct: 435 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 494

Query: 542 SNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           S L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 495 SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 535


>gi|392841224|ref|NP_001255968.1| leucine-rich repeat protein SHOC-2 isoform 2 [Homo sapiens]
 gi|296221218|ref|XP_002756643.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Callithrix
           jacchus]
          Length = 536

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 267/525 (50%), Positives = 345/525 (65%), Gaps = 52/525 (9%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI    
Sbjct: 63  GVAFSVDNTIKRPN---PAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSI---- 112

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
                  H+            LPS I  +T LT L L  N L SLP  +  L  L  L L
Sbjct: 113 -------HI------------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLAL 153

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
             N L  LP                         +  L  L ML +R NK+RE+P  +  
Sbjct: 154 SENSLTSLP-----------------------DSLDNLKKLRMLDLRHNKLREIPSVVYR 190

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L +L TL L  N +  + K+I N + L  L ++ N++  +P  +GNL +L+RL L YNRL
Sbjct: 191 LDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGNLSSLSRLGLRYNRL 250

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 251 SAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFST 310

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 311 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 370

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L
Sbjct: 371 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKL 430

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 431 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE 490

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 491 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 535


>gi|410976091|ref|XP_003994459.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Felis
           catus]
          Length = 536

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 267/525 (50%), Positives = 345/525 (65%), Gaps = 52/525 (9%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI    
Sbjct: 63  GVAFSVDNTIKRPN---PAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSI---- 112

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
                  H+            LPS I  +T LT L L  N L SLP  +  L  L  L L
Sbjct: 113 -------HI------------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLAL 153

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
             N L  LP                         +  L  L ML +R NK+RE+P  +  
Sbjct: 154 NENSLTSLP-----------------------DSLDNLKKLRMLDLRHNKLREIPSVVYR 190

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L +L TL L  N +  + K+I N + L  L ++ N++  +P  +GNL +L+RL L YNRL
Sbjct: 191 LDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGNLSSLSRLGLRYNRL 250

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 251 SAIPRSLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFST 310

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 311 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 370

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L
Sbjct: 371 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKL 430

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 431 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE 490

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 491 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 535


>gi|410917031|ref|XP_003971990.1| PREDICTED: leucine-rich repeat protein SHOC-2-like isoform 2
           [Takifugu rubripes]
          Length = 536

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 260/525 (49%), Positives = 341/525 (64%), Gaps = 52/525 (9%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P   T+KK    ++  + KE  +C+EEN + LDLSK       
Sbjct: 63  GVAFSVDNTIKRPN---PAAGTRKK---SSNAEVIKELNKCREENSMRLDLSK------- 109

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
                                                   S+  LP S+  L QL  L L
Sbjct: 110 ---------------------------------------RSIHMLPTSIKELTQLAELYL 130

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
             NKL  LP  +  L+SL  L L  N + ++   +  L  L ML +R NK+RE+P  +  
Sbjct: 131 YSNKLQSLPAELGCLSSLVTLALSENSLTSLPDSLDSLKKLQMLDLRHNKLREIPAVVYR 190

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L  L TL L  N +  + K+I + + L  L ++ N++  +P  +GNL ++ RL L YNRL
Sbjct: 191 LTTLTTLYLRFNRITTVEKDIRHLSKLTMLSIRENKIKQLPAEIGNLASINRLGLRYNRL 250

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S LP+GLLSSL  + ++TL+RN F +YP GGP+QF++
Sbjct: 251 SAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFST 310

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 311 IYSLNMEHNCINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 370

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ED+  LV+LEVL+LSNNLLKKLP  IGNLRKL+ LDLEENKLE LPNEI +LK+LQ+L
Sbjct: 371 IPEDVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKL 430

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L +NQL +LPR IGHLTNL++L +GEN LQ++PEEIGTLENL  LYLNDN  L+++PFE
Sbjct: 431 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLQNLPEEIGTLENLEELYLNDNPNLHSLPFE 490

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           LALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 491 LALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 535


>gi|157124572|ref|XP_001654111.1| shoc2 [Aedes aegypti]
 gi|108873917|gb|EAT38142.1| AAEL009928-PA [Aedes aegypti]
          Length = 472

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 258/519 (49%), Positives = 338/519 (65%), Gaps = 49/519 (9%)

Query: 65  VTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLT 124
           VTVKHPESNKPKPTTKK + IQAD+++ KEF RCKEE I  LDLSKSSIT +PPSV+  T
Sbjct: 2   VTVKHPESNKPKPTTKKGKAIQADVDVIKEFQRCKEEGIQRLDLSKSSITIIPPSVKDCT 61

Query: 125 HLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNE 184
            L E YLYGNK++SLP +IG ++NL  L L ENSLTSLPDSL NL+QL+VLDLRHNKL+E
Sbjct: 62  SLVEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSLPDSLQNLKQLKVLDLRHNKLSE 121

Query: 185 LPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTL 244
           +P V+YKL +L  LYLRFNRIK V  +++ LS+L+MLS+R+NKI ELP  +G L NL TL
Sbjct: 122 IPDVIYKLHTLTTLYLRFNRIKVVGDNLKNLSHLTMLSLRENKIHELPSAIGHLVNLTTL 181

Query: 245 DLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETL 304
           DL+HNHL+ LP EIGNC  L  LDLQHN+L++IP+ +GNL NL RL L YN+L S+P +L
Sbjct: 182 DLSHNHLKHLPAEIGNCVNLTALDLQHNDLLDIPETIGNLANLMRLGLRYNQLTSIPVSL 241

Query: 305 SKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFE 364
             C H++EFNVEG  +S LPDGLL+SL+++  ITLSRN F +YPSGGP QFT++  +NF 
Sbjct: 242 KNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNMVELNFG 301

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN 424
            N + K+P  I    +NL  + + +N+L  +P  +G    L  L+L  N++  L  +I  
Sbjct: 302 TNSLTKLPDDIHC-LQNLEILILSNNVLKRIPNTIGNLKKLRVLDLEENRLESLPSEIGL 360

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN-Q 483
           L +L+ L+L +N L  LP +IG+L  L  L + EN L+ LP EIG L+ L+ L +  N  
Sbjct: 361 LHDLQKLILQSNQLTSLPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESLYINDNAS 420

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
           LV LP  +    NL+ +S+    L ++P E                              
Sbjct: 421 LVKLPYELALCQNLAIMSIENCPLSALPPE------------------------------ 450

Query: 544 LQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
                            +V GGPSL+I+YLK+  PYR M
Sbjct: 451 -----------------VVGGGPSLVIQYLKLHSPYRQM 472


>gi|193786912|dbj|BAG52235.1| unnamed protein product [Homo sapiens]
          Length = 364

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/363 (60%), Positives = 285/363 (78%)

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
           ML +R NK+RE+P  +  L +L TL L  N +  + K+I N + L  L ++ N++  +P 
Sbjct: 1   MLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPA 60

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +GNL +L+RL L YNRL ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL
Sbjct: 61  EIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTL 120

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           +RN F  YP GGP+QF+++YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD 
Sbjct: 121 ARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 180

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           GTW  + ELNL TNQ++K+ ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEEN
Sbjct: 181 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 240

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           KLESLPNEI +LK+LQ+L+L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLEN
Sbjct: 241 KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLEN 300

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPY 579
           L  LYLNDN  L+++PFELALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPY
Sbjct: 301 LEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPY 360

Query: 580 RTM 582
           R M
Sbjct: 361 RAM 363



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 176/346 (50%), Gaps = 11/346 (3%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L  NKL  +PS +  + +LT L L  N +T++   + NL +L +L +R NK+ +LP  
Sbjct: 2   LDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAE 61

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE-LGELKNLVTLDLA 247
           +  L+SL  L LR+NR+  +   +   S L  L++ +N I  LP   L  L  L +L LA
Sbjct: 62  IGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLA 121

Query: 248 HNHLEELPKEIGNCTMLVT---LDLQHNELVNIP-DMLGNLINLTRLRLSYNRLESVPET 303
            N  +  P  +G  +   T   L+++HN +  IP  +      L++L +  N+L S+P  
Sbjct: 122 RNCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD 179

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
                 + E N+    L+ +P+  +S L S+  + LS N     P  G      +  ++ 
Sbjct: 180 FGTWTSMVELNLATNQLTKIPED-VSGLVSLEVLILSNNLLKKLPH-GLGNLRKLRELDL 237

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
           E N+++ +P  I +  K+L K+ + +N LT+LP  +G    LT L LG N ++ L E+I 
Sbjct: 238 EENKLESLPNEI-AYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIG 296

Query: 424 NLVNLEVLVLSNNL-LKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
            L NLE L L++N  L  LP  +    KL  + +E   L  LP +I
Sbjct: 297 TLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 342



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 165/351 (47%), Gaps = 34/351 (9%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +++  L L  + IT +   ++ L+ L  L +  NK+  LP++IG +++L+ LGL  N L+
Sbjct: 20  DSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGNLSSLSRLGLRYNRLS 79

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELP----MVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           ++P SLA    L  L+L +N ++ LP      + KL SL +    F       P     S
Sbjct: 80  AIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPS--QFS 137

Query: 217 NLSMLSMRDNKIRELPPEL-GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
            +  L+M  N+I ++P  +    K L  L++  N L  LP + G  T +V L+L  N+L 
Sbjct: 138 TIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLT 197

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            IP+ +  L++L  L LS N L+ +P  L     L E ++E   L SLP+  ++ L  + 
Sbjct: 198 KIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQ 256

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + L+ N+ T  P G                              NL+ + + +NLLT L
Sbjct: 257 KLVLTNNQLTTLPRG-------------------------IGHLTNLTHLGLGENLLTHL 291

Query: 396 PLDLGTWVGLTELNLGTN-QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           P ++GT   L EL L  N  +  L  ++     L ++ + N  L  LP  I
Sbjct: 292 PEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 342



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 115/230 (50%), Gaps = 25/230 (10%)

Query: 103 ILNLDLSKSSITHLPPSV-EKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           I +L++  + I  +P  +  +   L +L +  N+L SLP   G  T++  L LA N LT 
Sbjct: 139 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 198

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P+ ++ L  L VL L +N L +LP  +  L  L+                        L
Sbjct: 199 IPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLR-----------------------EL 235

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + +NK+  LP E+  LK+L  L L +N L  LP+ IG+ T L  L L  N L ++P+ +
Sbjct: 236 DLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEI 295

Query: 282 GNLINLTRLRLSYN-RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           G L NL  L L+ N  L S+P  L+ C  L+  ++E C LS LP  +++ 
Sbjct: 296 GTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 345


>gi|207080310|ref|NP_001128872.1| DKFZP459K227 protein [Pongo abelii]
 gi|55731898|emb|CAH92658.1| hypothetical protein [Pongo abelii]
          Length = 436

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/374 (59%), Positives = 284/374 (75%), Gaps = 6/374 (1%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRPN---PAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHILP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S++ LT L ELYLY NKL SLP+++G + NL  L L+ENSLTSLPDSL NL++LR+LDL
Sbjct: 117 SSIKVLTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDL 176

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           RHNKL E+P VVY+L SL  LYLRFNRI TV  DI+ LS LSMLS+R+NKI++LP E+GE
Sbjct: 177 RHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGE 236

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L NL+TLD+AHN LE LPKEIGNCT +  LDLQHNEL+++PD +GNL +L+RL L YNRL
Sbjct: 237 LCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRL 296

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
            ++P +L+KC  L E N+E   +S+LP+ LLSSL  +N++TL+RN F  YP GGP+QF++
Sbjct: 297 SAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFST 356

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +YS+N EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K
Sbjct: 357 IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK 416

Query: 418 LSEDIQNLVNLEVL 431
           + ED+  LV L  L
Sbjct: 417 IPEDVSGLVLLRFL 430



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 163/311 (52%), Gaps = 10/311 (3%)

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
           I+ L+ L+ L +  NK++ LP E+G L NL+TL L+ N L  LP  + N   L  LDL+H
Sbjct: 119 IKVLTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRH 178

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           N+L  IP ++  L +LT L L +NR+ +V + +     L+  ++    +  LP   +  L
Sbjct: 179 NKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLP-AEIGEL 237

Query: 332 TSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
            ++  + ++ N+    P   G  TQ T+   ++ +HN++  +P  I     +LS++ ++ 
Sbjct: 238 CNLITLDVAHNQLEHLPKEIGNCTQITN---LDLQHNELLDLPDTI-GNLSSLSRLGLRY 293

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI-QNLVNLEVLVLSNNLLKKLP-SSIGN 447
           N L+++P  L     L ELNL  N IS L E +  +LV L  L L+ N  +  P      
Sbjct: 294 NRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQ 353

Query: 448 LRKLKCLDLEENKLESLPNEI-GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
              +  L++E N++  +P  I    K L +L ++ NQL SLP   G  T++  L++  N 
Sbjct: 354 FSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQ 413

Query: 507 LQSIPEEIGTL 517
           L  IPE++  L
Sbjct: 414 LTKIPEDVSGL 424



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 1/184 (0%)

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           R +N  ++++    +  LP  +     LTEL L +N++  L  ++  LVNL  L LS N 
Sbjct: 98  REENSMRLDLSKRSIHILPSSIKVLTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENS 157

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L  LP S+ NL+KL+ LDL  NKL  +P+ +  L  L  L L+ N++ ++ + I +L+ L
Sbjct: 158 LTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKL 217

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
           S LS+ EN ++ +P EIG L NL TL +  N  L ++P E+  C+ +  + L +  L  +
Sbjct: 218 SMLSIRENKIKQLPAEIGELCNLITLDVAHNQ-LEHLPKEIGNCTQITNLDLQHNELLDL 276

Query: 558 PSEI 561
           P  I
Sbjct: 277 PDTI 280



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 126/265 (47%), Gaps = 51/265 (19%)

Query: 253 ELPKEIGNCTM--LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           E+ KE+  C     + LDL    +  +P  +  L  LT L L  N+L+S+P  +   V+L
Sbjct: 89  EVIKELNKCREENSMRLDLSKRSIHILPSSIKVLTQLTELYLYSNKLQSLPAEVGCLVNL 148

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK 370
               +   +L+SLPD       S++N+   R                   ++  HN++ +
Sbjct: 149 MTLALSENSLTSLPD-------SLDNLKKLR------------------MLDLRHNKLRE 183

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           IP  ++                    LD      LT L L  N+I+ + +DI+NL  L +
Sbjct: 184 IPSVVYR-------------------LD-----SLTTLYLRFNRITTVEKDIKNLSKLSM 219

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA 490
           L +  N +K+LP+ IG L  L  LD+  N+LE LP EIG   ++  L LQ N+L+ LP  
Sbjct: 220 LSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDT 279

Query: 491 IGHLTNLSYLSVGENNLQSIPEEIG 515
           IG+L++LS L +  N L +IP  + 
Sbjct: 280 IGNLSSLSRLGLRYNRLSAIPRSLA 304



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 26/195 (13%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N++ LD++ + + HLP  +   T +  L L  N+L  LP  IG +++L+ LGL  N L++
Sbjct: 239 NLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSA 298

Query: 162 LPDSLA------------------------NLQQLRVLDLRHNKLNELPMVV-YKLTSLK 196
           +P SLA                        +L +L  L L  N     P+    + +++ 
Sbjct: 299 IPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIY 358

Query: 197 ILYLRFNRIKTVHPDIQYLSN-LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
            L +  NRI  +   I   +  LS L+M+DN++  LP + G   ++V L+LA N L ++P
Sbjct: 359 SLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIP 418

Query: 256 KEIGNCTMLVTLDLQ 270
           +++    +L  L  Q
Sbjct: 419 EDVSGLVLLRFLSYQ 433


>gi|312094637|ref|XP_003148090.1| sur-8-PB [Loa loa]
          Length = 380

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/380 (54%), Positives = 286/380 (75%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           +++++  +CK+     LDLS S I  +P S+  L  L EL+LY NKLA LP++IG + NL
Sbjct: 1   DLQRDLQKCKDNEETRLDLSSSDIVSIPSSIRDLVQLTELFLYKNKLAVLPNEIGNLVNL 60

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
             LGL+EN LTSLPD+LA L +L  LDLRHNKL ELP V+Y+++SL+ L+LR+NRI ++ 
Sbjct: 61  KKLGLSENGLTSLPDTLAALTRLETLDLRHNKLCELPPVIYQISSLETLWLRYNRIVSIG 120

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
            +I  L  L M+ +R+NKIRELPP +G++K+L+   L++NHL  +P+EIG C+ L  LDL
Sbjct: 121 SEIGRLKRLKMIDLRENKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEIGQCSELTQLDL 180

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
           QHN+LV++P+ +GNL NL RL + YN+L  +P  ++ C  L EF VE   L +LP+G+L+
Sbjct: 181 QHNDLVSLPEAMGNLQNLIRLGIRYNKLRHLPSGMAFCHKLEEFIVESNQLEALPEGMLA 240

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
           SL ++  I LSRN+ T +PSGGP QF S  SIN EHN I KIP+GIFS+A  L+K+N+K+
Sbjct: 241 SLPNLKTINLSRNELTVFPSGGPQQFASCVSINMEHNAIAKIPFGIFSKATGLTKLNLKE 300

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
           N LTS+PLD+G W+ +TELNL TNQ+  L +D+  LVNLEVLVLSNN+LKKLPS IG+L+
Sbjct: 301 NALTSMPLDMGCWLAMTELNLSTNQLRVLPDDVDKLVNLEVLVLSNNMLKKLPSQIGSLK 360

Query: 450 KLKCLDLEENKLESLPNEIG 469
           KL+ LDLEEN+L+++PNEIG
Sbjct: 361 KLRELDLEENELDAIPNEIG 380



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 161/346 (46%), Gaps = 57/346 (16%)

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           LDL  +++V+IP  + +L+ LT L L  N+L  +P  +   V+L +  +    L+SLPD 
Sbjct: 17  LDLSSSDIVSIPSSIRDLVQLTELFLYKNKLAVLPNEIGNLVNLKKLGLSENGLTSLPDT 76

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPT--QFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
           L ++LT +  + L  NK    P   P   Q +S+ ++   +N+I  I   I  R K L  
Sbjct: 77  L-AALTRLETLDLRHNKLCELP---PVIYQISSLETLWLRYNRIVSIGSEI-GRLKRLKM 131

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
           +++++N +  LP  +G    L    L  N +  + E+I     L  L L +N L  LP +
Sbjct: 132 IDLRENKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEIGQCSELTQLDLQHNDLVSLPEA 191

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR--------------- 489
           +GNL+ L  L +  NKL  LP+ + F  +L+  I++SNQL +LP                
Sbjct: 192 MGNLQNLIRLGIRYNKLRHLPSGMAFCHKLEEFIVESNQLEALPEGMLASLPNLKTINLS 251

Query: 490 --------------------------AIGHL--------TNLSYLSVGENNLQSIPEEIG 515
                                     AI  +        T L+ L++ EN L S+P ++G
Sbjct: 252 RNELTVFPSGGPQQFASCVSINMEHNAIAKIPFGIFSKATGLTKLNLKENALTSMPLDMG 311

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
               +  L L+ N  L  +P ++    NL+++ L N  L ++PS+I
Sbjct: 312 CWLAMTELNLSTNQ-LRVLPDDVDKLVNLEVLVLSNNMLKKLPSQI 356



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 104/188 (55%), Gaps = 1/188 (0%)

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           NL K+ + +N LTSLP  L     L  L+L  N++ +L   I  + +LE L L  N +  
Sbjct: 59  NLKKLGLSENGLTSLPDTLAALTRLETLDLRHNKLCELPPVIYQISSLETLWLRYNRIVS 118

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           + S IG L++LK +DL ENK+  LP  IG +K L   +L  N L ++P  IG  + L+ L
Sbjct: 119 IGSEIGRLKRLKMIDLRENKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEIGQCSELTQL 178

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
            +  N+L S+PE +G L+NL  L +  N  L ++P  +A C  L+   +++  L  +P  
Sbjct: 179 DLQHNDLVSLPEAMGNLQNLIRLGIRYNK-LRHLPSGMAFCHKLEEFIVESNQLEALPEG 237

Query: 561 IVVGGPSL 568
           ++   P+L
Sbjct: 238 MLASLPNL 245



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 100/179 (55%), Gaps = 1/179 (0%)

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
           +++++  + + S+P  +   V LTEL L  N+++ L  +I NLVNL+ L LS N L  LP
Sbjct: 15  TRLDLSSSDIVSIPSSIRDLVQLTELFLYKNKLAVLPNEIGNLVNLKKLGLSENGLTSLP 74

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
            ++  L +L+ LDL  NKL  LP  I  +  L+ L L+ N++VS+   IG L  L  + +
Sbjct: 75  DTLAALTRLETLDLRHNKLCELPPVIYQISSLETLWLRYNRIVSIGSEIGRLKRLKMIDL 134

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            EN ++ +P  IG +++L    L+ N  L  IP E+  CS L  + L +  L  +P  +
Sbjct: 135 RENKIRELPPTIGQIKSLIVCLLSYNH-LRTIPEEIGQCSELTQLDLQHNDLVSLPEAM 192



 Score = 46.2 bits (108), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 3/102 (2%)

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
           E  RL L S+ +VS+P +I  L  L+ L + +N L  +P EIG L NL  L L++N  L 
Sbjct: 13  EETRLDLSSSDIVSIPSSIRDLVQLTELFLYKNKLAVLPNEIGNLVNLKKLGLSENG-LT 71

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIPSEI--VVGGPSLIIRY 572
           ++P  LA  + L+ + L +  L ++P  I  +    +L +RY
Sbjct: 72  SLPDTLAALTRLETLDLRHNKLCELPPVIYQISSLETLWLRY 113


>gi|260836016|ref|XP_002613003.1| hypothetical protein BRAFLDRAFT_213228 [Branchiostoma floridae]
 gi|229298385|gb|EEN69012.1| hypothetical protein BRAFLDRAFT_213228 [Branchiostoma floridae]
          Length = 299

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/298 (67%), Positives = 250/298 (83%)

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L+MLS+R+NKIRELP  +G+L NL+ LD++HNHLE LP EIGNC  + +LDLQHNEL+++
Sbjct: 2   LTMLSLRENKIRELPGGIGQLVNLINLDVSHNHLEHLPAEIGNCVQMSSLDLQHNELLDL 61

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P+ +GNL  L+RL L YNRL SVP++LS C  + EFN EG  LSSLP+GLLSSL +++++
Sbjct: 62  PETIGNLKLLSRLGLRYNRLASVPKSLSNCTEMEEFNAEGNNLSSLPEGLLSSLVNMSSL 121

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
           TL+RN F++YP GGP QF +VYSIN EHN I+KIP+GIFSRAK L+K+NMKDN LTSLPL
Sbjct: 122 TLARNNFSSYPIGGPAQFATVYSINMEHNHINKIPFGIFSRAKYLTKLNMKDNQLTSLPL 181

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           D+GTW  + ELNLGTNQ+ KL EDIQ+L NLE L+LSNNLLKKLP  IGNLR L+ LDLE
Sbjct: 182 DVGTWENMVELNLGTNQLQKLPEDIQHLTNLETLILSNNLLKKLPRGIGNLRMLRVLDLE 241

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           EN+LESLP EI +L++L RL++QSNQL ++PRAIGHLTNL+YL VGENNLQ IPEEIG
Sbjct: 242 ENRLESLPTEIAYLRDLNRLVVQSNQLTTMPRAIGHLTNLTYLGVGENNLQQIPEEIG 299



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 152/300 (50%), Gaps = 12/300 (4%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L  NK+  LP  IG + NL  L ++ N L  LP  + N  Q+  LDL+HN+L +LP  
Sbjct: 5   LSLRENKIRELPGGIGQLVNLINLDVSHNHLEHLPAEIGNCVQMSSLDLQHNELLDLPET 64

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE-LGELKNLVTLDLA 247
           +  L  L  L LR+NR+ +V   +   + +   +   N +  LP   L  L N+ +L LA
Sbjct: 65  IGNLKLLSRLGLRYNRLASVPKSLSNCTEMEEFNAEGNNLSSLPEGLLSSLVNMSSLTLA 124

Query: 248 HNHLEELPKEIGNCTMLVT---LDLQHNELVNIP-DMLGNLINLTRLRLSYNRLESVPET 303
            N+    P  IG      T   ++++HN +  IP  +      LT+L +  N+L S+P  
Sbjct: 125 RNNFSSYP--IGGPAQFATVYSINMEHNHINKIPFGIFSRAKYLTKLNMKDNQLTSLPLD 182

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSIN 362
           +    ++ E N+    L  LP+  +  LT++  + LS N     P G G  +   V  ++
Sbjct: 183 VGTWENMVELNLGTNQLQKLPED-IQHLTNLETLILSNNLLKKLPRGIGNLRMLRV--LD 239

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            E N+++ +P  I +  ++L+++ ++ N LT++P  +G    LT L +G N + ++ E+I
Sbjct: 240 LEENRLESLPTEI-AYLRDLNRLVVQSNQLTTMPRAIGHLTNLTYLGVGENNLQQIPEEI 298



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 140/273 (51%), Gaps = 27/273 (9%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N++NLD+S + + HLP  +     +  L L  N+L  LP  IG +  L+ LGL  N L S
Sbjct: 24  NLINLDVSHNHLEHLPAEIGNCVQMSSLDLQHNELLDLPETIGNLKLLSRLGLRYNRLAS 83

Query: 162 LPDSLANLQQLRVLDLRHNKLNELP-MVVYKLTSLKILYL--------------RFNRIK 206
           +P SL+N  ++   +   N L+ LP  ++  L ++  L L              +F  + 
Sbjct: 84  VPKSLSNCTEMEEFNAEGNNLSSLPEGLLSSLVNMSSLTLARNNFSSYPIGGPAQFATVY 143

Query: 207 TVHPDIQYLSN-----------LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           +++ +  +++            L+ L+M+DN++  LP ++G  +N+V L+L  N L++LP
Sbjct: 144 SINMEHNHINKIPFGIFSRAKYLTKLNMKDNQLTSLPLDVGTWENMVELNLGTNQLQKLP 203

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
           ++I + T L TL L +N L  +P  +GNL  L  L L  NRLES+P  ++    LN   V
Sbjct: 204 EDIQHLTNLETLILSNNLLKKLPRGIGNLRMLRVLDLEENRLESLPTEIAYLRDLNRLVV 263

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
           +   L+++P   +  LT++  + +  N     P
Sbjct: 264 QSNQLTTMPRA-IGHLTNLTYLGVGENNLQQIP 295



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 116/226 (51%), Gaps = 26/226 (11%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQI-GYVTNLTCLGLAENSLTSLP- 163
           L L  + +  +P S+   T +EE    GN L+SLP  +   + N++ L LA N+ +S P 
Sbjct: 74  LGLRYNRLASVPKSLSNCTEMEEFNAEGNNLSSLPEGLLSSLVNMSSLTLARNNFSSYPI 133

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVY--------------KLTSLKI----------LY 199
              A    +  +++ HN +N++P  ++              +LTSL +          L 
Sbjct: 134 GGPAQFATVYSINMEHNHINKIPFGIFSRAKYLTKLNMKDNQLTSLPLDVGTWENMVELN 193

Query: 200 LRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIG 259
           L  N+++ +  DIQ+L+NL  L + +N +++LP  +G L+ L  LDL  N LE LP EI 
Sbjct: 194 LGTNQLQKLPEDIQHLTNLETLILSNNLLKKLPRGIGNLRMLRVLDLEENRLESLPTEIA 253

Query: 260 NCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
               L  L +Q N+L  +P  +G+L NLT L +  N L+ +PE + 
Sbjct: 254 YLRDLNRLVVQSNQLTTMPRAIGHLTNLTYLGVGENNLQQIPEEIG 299



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 91/158 (57%), Gaps = 1/158 (0%)

Query: 103 ILNLDLSKSSITHLPPSV-EKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           + ++++  + I  +P  +  +  +L +L +  N+L SLP  +G   N+  L L  N L  
Sbjct: 142 VYSINMEHNHINKIPFGIFSRAKYLTKLNMKDNQLTSLPLDVGTWENMVELNLGTNQLQK 201

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP+ + +L  L  L L +N L +LP  +  L  L++L L  NR++++  +I YL +L+ L
Sbjct: 202 LPEDIQHLTNLETLILSNNLLKKLPRGIGNLRMLRVLDLEENRLESLPTEIAYLRDLNRL 261

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIG 259
            ++ N++  +P  +G L NL  L +  N+L+++P+EIG
Sbjct: 262 VVQSNQLTTMPRAIGHLTNLTYLGVGENNLQQIPEEIG 299



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 62/112 (55%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ L+L  + +  LP  ++ LT+LE L L  N L  LP  IG +  L  L L EN L 
Sbjct: 187 ENMVELNLGTNQLQKLPEDIQHLTNLETLILSNNLLKKLPRGIGNLRMLRVLDLEENRLE 246

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
           SLP  +A L+ L  L ++ N+L  +P  +  LT+L  L +  N ++ +  +I
Sbjct: 247 SLPTEIAYLRDLNRLVVQSNQLTTMPRAIGHLTNLTYLGVGENNLQQIPEEI 298



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 1/113 (0%)

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
           KL  L L ENK+  LP  IG L  L  L +  N L  LP  IG+   +S L +  N L  
Sbjct: 1   KLTMLSLRENKIRELPGGIGQLVNLINLDVSHNHLEHLPAEIGNCVQMSSLDLQHNELLD 60

Query: 510 IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           +PE IG L+ L  L L  N  L ++P  L+ C+ ++  + +   LS +P  ++
Sbjct: 61  LPETIGNLKLLSRLGLRYNR-LASVPKSLSNCTEMEEFNAEGNNLSSLPEGLL 112


>gi|345324055|ref|XP_001513272.2| PREDICTED: leucine-rich repeat protein SHOC-2 [Ornithorhynchus
           anatinus]
          Length = 537

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 243/528 (46%), Positives = 329/528 (62%), Gaps = 57/528 (10%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           GV      T+K P    P P T+KK    ++  + KE  +C+EEN + LDLSK SI  LP
Sbjct: 63  GVAFSVDNTIKRP---NPAPGTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHMLP 116

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+++LT L                       T L L  N L SLP  +  L  L  L L
Sbjct: 117 SSIKELTQL-----------------------TELYLYSNKLQSLPAEVGCLVNLMTLAL 153

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
             N L  LP  +  L  L++L LR N+++ +   +  L +L+ L +R N++  +  ++  
Sbjct: 154 SENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRMTTVEKDIKN 213

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L  L+ L +  N +++LP EIG    L+TLD+ HN+L ++P  +GN   +T L L +N L
Sbjct: 214 LSKLIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNEL 273

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
             +PET+                         +L+S+N + L  N+ +A P     + ++
Sbjct: 274 LDLPETIG------------------------NLSSLNRLGLRYNRLSAIPRSL-AKCSA 308

Query: 358 VYSINFEHNQIDKIP---YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
           +  +N E+N I  +P   +GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ
Sbjct: 309 LEELNLENNNISTLPEXXFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQ 368

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           ++K+ ED+  LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+L
Sbjct: 369 LTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 428

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           Q+L+L +NQL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++
Sbjct: 429 QKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSL 488

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           PFELALCS L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 489 PFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 536


>gi|341895737|gb|EGT51672.1| CBN-SOC-2 protein [Caenorhabditis brenneri]
          Length = 368

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/361 (58%), Positives = 277/361 (76%)

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
           ML +R+NKIRELP  +G+L +LV   +++NHL  +P+EIG C  L  LDLQHN+L  +P 
Sbjct: 1   MLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECQSLTQLDLQHNDLSELPY 60

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +G L +L R+ + YN++  +P  L  C  L EF VE   L  LP  LL+ L  I+ + L
Sbjct: 61  SIGKLTSLVRIGIRYNKIRCIPSELENCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNL 120

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           SRN+ TA+P+GGP QF S  +IN EHNQI KIP GIFS+A  L+K+N+K+N L SLPLD+
Sbjct: 121 SRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDM 180

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G+W  +TELNL TNQ+  L EDI+ LVNLE+LVLSNN LKKLP+ IGNL+KL+ LDLEEN
Sbjct: 181 GSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLEEN 240

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +LE++P EIGFL+ L +L +QSN++V+LPR+IG+L +L  L +GENNL +IPEEIG L++
Sbjct: 241 ELETVPTEIGFLQHLTKLWVQSNKIVTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDS 300

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPY 579
           L +LYLNDN+ L+N+PFELALC +L+IMS++N PLSQIP EI  GGPSL+I+YLKMQGPY
Sbjct: 301 LKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGPY 360

Query: 580 R 580
           R
Sbjct: 361 R 361



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 184/364 (50%), Gaps = 34/364 (9%)

Query: 134 NKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLT 193
           NK+  LPS IG +T+L    ++ N LT +P+ +   Q L  LDL+HN L+ELP  + KLT
Sbjct: 7   NKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECQSLTQLDLQHNDLSELPYSIGKLT 66

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE-LGELKNLVTLDLAHNHLE 252
           SL  + +R+N+I+ +  +++    L    +  N ++ LPP  L  L  + T++L+ N L 
Sbjct: 67  SLVRIGIRYNKIRCIPSELENCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELT 126

Query: 253 ELPKEIGNCTML---VTLDLQHNELVNIP-DMLGNLINLTRLRLSYNRLESVPETLSKCV 308
             P   G        VT++++HN++  IP  +      LT+L L  N L S+P  +    
Sbjct: 127 AFPA--GGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWT 184

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
            + E N+    L  LP+  +  L ++  + LS N+    P                 NQI
Sbjct: 185 SITELNLSTNQLKVLPED-IEKLVNLEILVLSNNQLKKLP-----------------NQI 226

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
             +        K L ++++++N L ++P ++G    LT+L + +N+I  L   I NL +L
Sbjct: 227 GNL--------KKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKIVTLPRSIGNLCSL 278

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN-KLESLPNEIGFLKELQRLILQSNQLVSL 487
           + L L  N L  +P  IG+L  LK L L +N  L +LP E+   + L+ + ++++ L  +
Sbjct: 279 QDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQI 338

Query: 488 PRAI 491
           P  I
Sbjct: 339 PPEI 342



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 151/321 (47%), Gaps = 65/321 (20%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQ-------- 142
           + +E   C  +++  LDL  + ++ LP S+ KLT L  + +  NK+  +PS+        
Sbjct: 35  VPEEIGEC--QSLTQLDLQHNDLSELPYSIGKLTSLVRIGIRYNKIRCIPSELENCQQLE 92

Query: 143 ----------------IGYVTNLTCLGLAENSLTSLPDS--------------------- 165
                           +  +  +  + L+ N LT+ P                       
Sbjct: 93  EFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKI 152

Query: 166 ----LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
                +   +L  L+L+ N+L  LP+ +   TS+  L L  N++K +  DI+ L NL +L
Sbjct: 153 PIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEIL 212

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + +N++++LP ++G LK L  LDL  N LE +P EIG    L  L +Q N++V +P  +
Sbjct: 213 VLSNNQLKKLPNQIGNLKKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKIVTLPRSI 272

Query: 282 GNLINLTRLRLSYNRLESVPETLS-----KCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           GNL +L  LRL  N L ++PE +      K ++LN    +  +L +LP   L+   S+  
Sbjct: 273 GNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLN----DNSSLHNLPFE-LALCQSLEI 327

Query: 337 ITLSRNKFTAYP----SGGPT 353
           +++  +  +  P    +GGP+
Sbjct: 328 MSIENSPLSQIPPEITAGGPS 348


>gi|195997513|ref|XP_002108625.1| hypothetical protein TRIADDRAFT_51723 [Trichoplax adhaerens]
 gi|190589401|gb|EDV29423.1| hypothetical protein TRIADDRAFT_51723 [Trichoplax adhaerens]
          Length = 424

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 200/387 (51%), Positives = 272/387 (70%), Gaps = 10/387 (2%)

Query: 191 KLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
           KL  L +L +R N++K           L+++S+R+NKIR+LP  +G L+ LV  D+++NH
Sbjct: 22  KLKRLTVLDMRHNKLK---------DRLNLISLRENKIRKLPSSIGNLRMLVIFDVSYNH 72

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           LEE+P EIGNC  L +LDLQHNEL  IP  +GNL +L RL + YNRL SVP ++S    L
Sbjct: 73  LEEIPSEIGNCLQLTSLDLQHNELTEIPASIGNLRSLKRLEIKYNRLNSVPPSISNIGLL 132

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK 370
            EFN EG  +S LP   L  + S+ +I LSRNKF   P+G P+QF    SI  EHN+I++
Sbjct: 133 EEFNAEGNNISELPVNSLIRMRSLKSIQLSRNKFHELPAGNPSQFAFTQSIVIEHNRIER 192

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           IP  IF  AK L+ +N+KDN L SLP D GTW  LTELNLGTN +  +S+D++NLVNLEV
Sbjct: 193 IPSNIFKLAKLLNSLNLKDNQLASLPPDFGTWTSLTELNLGTNHLGSISDDLENLVNLEV 252

Query: 431 LVLSNNLLKKLP-SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR 489
           L+LSNN+L  LP +++  L+KL+ L++EEN+LE LP EIG +  L RL+  +N L  LP+
Sbjct: 253 LILSNNMLTSLPQNALPALQKLRVLEIEENELEFLPPEIGDMSMLTRLVANNNLLTQLPK 312

Query: 490 AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
            IG L+ L YL+ GEN L SIPEEIG L++L  LYLNDN  LN++P ELA+C +L +MS+
Sbjct: 313 EIGKLSKLMYLAAGENRLMSIPEEIGNLKSLEQLYLNDNEELNDLPLELAMCESLHLMSV 372

Query: 550 DNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
           + CPLS++P+E+  GGPS I +YL+++
Sbjct: 373 EGCPLSRLPAEVTAGGPSFIFQYLRVE 399



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 170/344 (49%), Gaps = 10/344 (2%)

Query: 131 LYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVY 190
           L  NK+  LPS IG +  L    ++ N L  +P  + N  QL  LDL+HN+L E+P  + 
Sbjct: 45  LRENKIRKLPSSIGNLRMLVIFDVSYNHLEEIPSEIGNCLQLTSLDLQHNELTEIPASIG 104

Query: 191 KLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP-ELGELKNLVTLDLAHN 249
            L SLK L +++NR+ +V P I  +  L   +   N I ELP   L  +++L ++ L+ N
Sbjct: 105 NLRSLKRLEIKYNRLNSVPPSISNIGLLEEFNAEGNNISELPVNSLIRMRSLKSIQLSRN 164

Query: 250 HLEELPKEIGNCTMLV---TLDLQHNELVNIPDMLGNLIN-LTRLRLSYNRLESVPETLS 305
              ELP   GN +      ++ ++HN +  IP  +  L   L  L L  N+L S+P    
Sbjct: 165 KFHELPA--GNPSQFAFTQSIVIEHNRIERIPSNIFKLAKLLNSLNLKDNQLASLPPDFG 222

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
               L E N+    L S+ D  L +L ++  + LS N  T+ P         +  +  E 
Sbjct: 223 TWTSLTELNLGTNHLGSISDD-LENLVNLEVLILSNNMLTSLPQNALPALQKLRVLEIEE 281

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           N+++ +P  I   +  L+++   +NLLT LP ++G    L  L  G N++  + E+I NL
Sbjct: 282 NELEFLPPEIGDMSM-LTRLVANNNLLTQLPKEIGKLSKLMYLAAGENRLMSIPEEIGNL 340

Query: 426 VNLEVLVLSNN-LLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
            +LE L L++N  L  LP  +     L  + +E   L  LP E+
Sbjct: 341 KSLEQLYLNDNEELNDLPLELAMCESLHLMSVEGCPLSRLPAEV 384


>gi|358339444|dbj|GAA47507.1| leucine-rich repeat protein soc-2 homolog [Clonorchis sinensis]
          Length = 620

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 237/572 (41%), Positives = 349/572 (61%), Gaps = 17/572 (2%)

Query: 21  LASYREESSTALLNSDSSRSDEYGYFED----MPEKDNKKCGVDVKKTVTVKHPESNK-- 74
           ++ Y     ++L N D      +  F       P         + +KTV ++  +  K  
Sbjct: 49  VSQYSHSPVSSLKNIDGGSKSRHKSFNSNVAAKPSFSGANGSDNARKTVLLQPHDGKKFR 108

Query: 75  --PKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSV-EKLTHLEELYL 131
             PK + +K    Q   ++ +E   C+E     LDLS   +  LP  + + L  L ELYL
Sbjct: 109 LHPKSSLRK----QRSPDLYRELAECRESKNNVLDLSHCELQQLPNGIFDDLPGLTELYL 164

Query: 132 YGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL-NELPMVVY 190
           Y NKL SLP+ IG + +L  L + +N L  LP  +A L  L VLDLRHN+L   LP  + 
Sbjct: 165 YTNKLTSLPASIGQLAHLRRLSIQQNMLARLPKEMAKLTGLEVLDLRHNRLEGNLPECLP 224

Query: 191 KLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHN 249
            L  LK L+L+FN++  +   I+ L +L+ L +  N ++ +LP  +G+L  L TLDL++N
Sbjct: 225 SLKQLKSLFLKFNKLSNIS-GIENLKHLTCLVLGQNSLKNDLPDVIGQLTCLTTLDLSNN 283

Query: 250 HLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVH 309
            +  LP+ IGNCT L +L+LQHN+L  +P+ +GNL NL++L + YN+L  +P++L+ CV 
Sbjct: 284 QITSLPENIGNCTALKSLNLQHNQLQRLPNSIGNLRNLSKLSIKYNQLVEIPQSLANCVL 343

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
           L+EFNVE   LSSLPD LL SL ++ NITLSRN FT +P+GGP QF +  S+N ++NQI 
Sbjct: 344 LDEFNVESNQLSSLPDELLLSLPNLVNITLSRNHFTDFPTGGPGQFKNCISLNVDYNQIT 403

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSL-PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
            IP  IFS A  L+++N+ DN +T L P DL  W  + ELNLG+N+++ L  +I  L +L
Sbjct: 404 TIPQSIFSEATRLNRLNLCDNNITCLVPSDLHHWSSVVELNLGSNRLTSLPAEIGELQHL 463

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           EVL L+ N L+ LP  I  L KL+ L L+ N+LESLP ++  L  LQ L + SN+L + P
Sbjct: 464 EVLELNFNQLRVLPDEITKLSKLRILGLDSNELESLPEDLSGLVSLQELNVLSNRLTTFP 523

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMS 548
           R++ +L  L  +  GEN++Q +P E+G +  L  L+LNDN  LN++P EL+LC NL+I+S
Sbjct: 524 RSVENLPKLKVIKAGENDIQRLPPELGNMSALQELHLNDNLNLNSLPVELSLCKNLKILS 583

Query: 549 LDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYR 580
           L+NCPL  I   +V GG ++II +L+    +R
Sbjct: 584 LENCPLRDIERNVVEGGSAMIIYFLQQVIQFR 615


>gi|386783705|gb|AFJ24747.1| SHOC2 [Schmidtea mediterranea]
          Length = 600

 Score =  341 bits (874), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 206/516 (39%), Positives = 320/516 (62%), Gaps = 15/516 (2%)

Query: 61  VKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILN--LDLSKSSITHLPP 118
           +KK   V+     +PK     K+     L+I K+     +E I++  LDLS   ++ +P 
Sbjct: 85  IKKVSNVQFENYKRPKVAKSMKK-----LDISKKI----DELIISNTLDLSSRGLSSIPN 135

Query: 119 SVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLR 178
             +K  +++EL L  NKL  L      +  L    L +NS++  P  L+    L+VLDLR
Sbjct: 136 LKDK--NIKELMLKDNKLERLEG-FPVLMQLERCYLQQNSISVFPVELSKCTGLKVLDLR 192

Query: 179 HNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGEL 238
            N++  +P  +++L +L++L L  NRI+++   +Q L NL  L +  N I  LPP +G+L
Sbjct: 193 SNRIEIIPECLFELQNLELLILSSNRIESIPDSVQKLQNLKHLGLDKNSISRLPPVIGKL 252

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           + L+ L+LA N ++ELP+E+ NC  +  LD+ HN L  +P+ LGNL NL RL +  N++ 
Sbjct: 253 QRLMNLNLAFNKIDELPEELCNCASMRDLDVMHNRLTELPESLGNLQNLVRLNIRNNQIT 312

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
            +P +L K  +L EF +E   + +LPD  LS+L +++N+ LSRN F  +P+GGP QF + 
Sbjct: 313 KIPISLVKVKNLKEFIMEQNCVENLPDQFLSNLGNLDNVNLSRNAFKTFPTGGPNQFATT 372

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN-LLTSLPLDLGTWVGLTELNLGTNQISK 417
            S+N  +N ID IP GIFS +K+LS +N++ N + T +P D+ TW  L EL+L +NQ+S 
Sbjct: 373 MSLNMSNNHIDCIPMGIFSVSKHLSILNLRGNEICTLIPNDVVTWTTLVELDLSSNQLSI 432

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           +  +I  LVNL+ L LS+N +KKLP +IGNL  L  L+L++N++ESLP+EIG L+ +  L
Sbjct: 433 IPTEIGALVNLQKLHLSSNHIKKLPPTIGNLNALVLLELDDNQIESLPDEIGNLQSVVDL 492

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L +N+L SLP +IG L +L  L + EN+L+ +P EIG + +L  L+L +N  L+N+P E
Sbjct: 493 NLTTNELKSLPASIGKLKSLMKLRLAENDLRIVPPEIGEMSSLTELHLKNNVNLDNLPEE 552

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYL 573
           L LC  L I+SL+NC L  IP ++   G  +I+ + 
Sbjct: 553 LTLCEKLMILSLENCGLRNIPEQVKSQGVRIIVYFF 588


>gi|339235783|ref|XP_003379446.1| putative leucine Rich repeat-containing domain protein [Trichinella
           spiralis]
 gi|316977876|gb|EFV60920.1| putative leucine Rich repeat-containing domain protein [Trichinella
           spiralis]
          Length = 529

 Score =  338 bits (867), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 201/413 (48%), Positives = 264/413 (63%), Gaps = 57/413 (13%)

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           LS L ML +R+NKI+ LP  +G L+ L+ L  ++NHL  +P EIG C  L  LD QHNEL
Sbjct: 124 LSKLKMLDLRENKIQALPYSIGSLQCLLVLLCSYNHLRNVPCEIGQCAELSQLDFQHNEL 183

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             IP+ +G L NLTRL L YN+L ++P +LS C  L EFN+EG  LS LP+G+LS L+++
Sbjct: 184 SEIPESVGCLRNLTRLGLRYNKLTAIPASLSNCTKLEEFNIEGNNLSYLPEGMLSRLSNV 243

Query: 335 NNITLSRNKFTAYPSGGPTQFTS--------VYSINFEHNQIDKIPYG------------ 374
           + I LSRN F A+P GGP QFT+        +YS+    NQ+  +  G            
Sbjct: 244 STINLSRNDFAAFPQGGPAQFTASVVRCRVWLYSLKQFGNQMFVVQTGSQLGAQSNWQNS 303

Query: 375 ---IFSRAKNLSKVNMKDNLLTSLP-----LDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
               F+R +    V  +   +  +      +D+GTW  L ELNL TNQ+  L +DI  L 
Sbjct: 304 FWNFFTR-QTFDHVEFEGERIDCIAVGVYFVDIGTWKSLVELNLSTNQLRLLPDDIDKLQ 362

Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
           NLE+L++SNN +K+LP SIGNL+KL+ LDLEEN+LESLPNEIGFL  L +L++QSN+L S
Sbjct: 363 NLEILIMSNNYIKRLPLSIGNLKKLRELDLEENELESLPNEIGFLLNLTKLLVQSNKLTS 422

Query: 487 LPRAIGHLTNLSYLSVGENNLQSIPEEI-------------------GTLENLHTLYLND 527
           LPR IG          GENNL  +PEEI                   GTLENL +LY+ND
Sbjct: 423 LPRTIG---------AGENNLTYLPEEIGKKNCFRRSFINIGNHSCAGTLENLKSLYIND 473

Query: 528 NTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYR 580
           N  L+ +P+ELALC +L+IMS++NCPLSQIP+EI  GGPSL+I++LKMQGPYR
Sbjct: 474 NPSLHTLPYELALCGSLEIMSIENCPLSQIPAEITAGGPSLVIQFLKMQGPYR 526



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 96/210 (45%), Gaps = 20/210 (9%)

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS 416
           + Y I F   Q+D    G +   + L++  +   L   L      + G T  + G     
Sbjct: 36  ATYRIVFVQEQVDHFADGNWQFGQ-LAQAGLVGKLFNCL----AGFAGCTGRSSGVGSTP 90

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSI--------GNLRKLKCLDLEENKLESLPNEI 468
           + SE            LS+N++  + +SI         NL KLK LDL ENK+++LP  I
Sbjct: 91  QSSERD------STGHLSHNIIGNIVASIQQNHQCRRTNLSKLKMLDLRENKIQALPYSI 144

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G L+ L  L+   N L ++P  IG    LS L    N L  IPE +G L NL  L L  N
Sbjct: 145 GSLQCLLVLLCSYNHLRNVPCEIGQCAELSQLDFQHNELSEIPESVGCLRNLTRLGLRYN 204

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L  IP  L+ C+ L+  +++   LS +P
Sbjct: 205 K-LTAIPASLSNCTKLEEFNIEGNNLSYLP 233



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 112/235 (47%), Gaps = 30/235 (12%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLP-SQIGYVTNLTCLGLAENSL 159
            N+  L L  + +T +P S+   T LEE  + GN L+ LP   +  ++N++ + L+ N  
Sbjct: 194 RNLTRLGLRYNKLTAIPASLSNCTKLEEFNIEGNNLSYLPEGMLSRLSNVSTINLSRNDF 253

Query: 160 TSLPDS-----LANLQQLRVLDLRHNKLNELPMVVYKLTSLKI-------LYLRFNR--- 204
            + P        A++ + RV      +      VV   + L          +  F R   
Sbjct: 254 AAFPQGGPAQFTASVVRCRVWLYSLKQFGNQMFVVQTGSQLGAQSNWQNSFWNFFTRQTF 313

Query: 205 --------------IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
                         +     DI    +L  L++  N++R LP ++ +L+NL  L +++N+
Sbjct: 314 DHVEFEGERIDCIAVGVYFVDIGTWKSLVELNLSTNQLRLLPDDIDKLQNLEILIMSNNY 373

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           ++ LP  IGN   L  LDL+ NEL ++P+ +G L+NLT+L +  N+L S+P T+ 
Sbjct: 374 IKRLPLSIGNLKKLRELDLEENELESLPNEIGFLLNLTKLLVQSNKLTSLPRTIG 428



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 18/185 (9%)

Query: 143 IGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           IG   +L  L L+ N L  LPD +  LQ L +L + +N +  LP+ +  L  L+ L L  
Sbjct: 335 IGTWKSLVELNLSTNQLRLLPDDIDKLQNLEILIMSNNYIKRLPLSIGNLKKLRELDLEE 394

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIG--N 260
           N ++++  +I +L NL+ L ++ NK+  LP  +G            N+L  LP+EIG  N
Sbjct: 395 NELESLPNEIGFLLNLTKLLVQSNKLTSLPRTIGA---------GENNLTYLPEEIGKKN 445

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN-RLESVPETLSKCVHLNEFNVEGCA 319
           C     +++ ++         G L NL  L ++ N  L ++P  L+ C  L   ++E C 
Sbjct: 446 CFRRSFINIGNHSCA------GTLENLKSLYINDNPSLHTLPYELALCGSLEIMSIENCP 499

Query: 320 LSSLP 324
           LS +P
Sbjct: 500 LSQIP 504


>gi|313224282|emb|CBY20071.1| unnamed protein product [Oikopleura dioica]
          Length = 529

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 193/474 (40%), Positives = 293/474 (61%), Gaps = 5/474 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           LDLS  +   +  ++ +L   L+ LY+  NK+ +LP +IG +  +     +EN ++SLP+
Sbjct: 49  LDLSDQNNHSMSANISELAKTLQNLYVQKNKIHTLPREIGCLREMQIFAASENQISSLPE 108

Query: 165 SLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           SLANL  L+ LDLRHNKL  ++P+V+Y+L+SL  LY+  N++  +   +  L NL  L  
Sbjct: 109 SLANLTSLKRLDLRHNKLEGDVPLVIYQLSSLMELYMTHNKLTRLMSGLGNLRNLVHLDF 168

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
             NK+ E+P ELGELK L  L L  NHL  +P+ I  CT L  LD+ HN+L ++P+ +GN
Sbjct: 169 SQNKLTEVPSELGELKALQKLMLKSNHLTSIPEAISQCTSLSILDMSHNQLKSLPEKIGN 228

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
             NLT L L YNRL+ +P+++ +C  L  FNVE   +S  P   L   T I  +T+SRN 
Sbjct: 229 CENLTSLSLKYNRLQVIPDSIDQCKKLVHFNVESNQISCFPPSFLKKCTMIQVLTISRNT 288

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
           F   P        + +  +F  N+I  +   +F+  K L KV + +NL+  +P ++  W 
Sbjct: 289 FKDIPDLSKLDNLTAFDGSF--NKISSLRPKVFALPKIL-KVLLHNNLIKIIPPEIAIWK 345

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            +TEL++ +N +  +S  I NL  L+ L +SNN L+ LP +IG+++ L+ L+L+ENK+E 
Sbjct: 346 TVTELDISSNLLESVSVGIGNLDQLQELKISNNRLEFLPDTIGSMKALRVLELDENKIEY 405

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           +P++IGF   L+ L L SN++  LP  IG L  L  L +GEN+L  IP  IG L++L  L
Sbjct: 406 VPSDIGFCTNLEVLNLTSNKIEQLPTDIGSLQRLRKLLLGENDLLQIPPHIGMLDSLQEL 465

Query: 524 YLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQG 577
           ++N N  L+N+P  LA C +LQI+S+D CPLS+IP E  + GPS +++YLKM+ 
Sbjct: 466 FINSNLNLHNLPEHLANCRSLQILSIDKCPLSEIPDEYRLRGPSFVVQYLKMRA 519


>gi|320162772|gb|EFW39671.1| leucine-rich repeat protein SHOC-2 [Capsaspora owczarzaki ATCC
           30864]
          Length = 490

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 192/416 (46%), Positives = 267/416 (64%), Gaps = 3/416 (0%)

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LTSLPD L  L+ L VLDLRHNK  E+P V+Y++  L  LYLR+N++  +  DI  L+ L
Sbjct: 8   LTSLPDELELLKNLNVLDLRHNKFTEVPPVIYRMKQLSKLYLRYNKLTWISHDIGNLTGL 67

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
           ++LS+R+NKI ELP  LG L  L  LDL +N L  LP  IG  + L +L++++N+L  +P
Sbjct: 68  NILSIRNNKITELPASLGNLAGLQILDLMNNCLTALPSSIGKLSRLSSLNVEYNKLERLP 127

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           + +GNL+ L    L YN L  +P  +  CV L E NVEG  L  LP G+LS L ++NN+ 
Sbjct: 128 EEIGNLVKLKHFGLRYNSLVELPLAIKNCVLLEELNVEGNKLVVLPTGILSQLVNVNNLQ 187

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           LSRN FT  P+      T +   N ++N + +IP GIFS  K L K+N+  N +TS+P D
Sbjct: 188 LSRNNFTTIPA-DLGALTKLEIFNMDNNSVREIPAGIFSSLKLLGKINLNYNSITSIPND 246

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G  V L E+NLG+N++  L E +  LVNLE LVL NN L  LP S   L KL+ LDLE 
Sbjct: 247 IGDLVSLREINLGSNKLELLPETLGQLVNLESLVLGNNNLSALPESASRLVKLRVLDLEG 306

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L  LP EIG L  L+ L  QSN+L +LP+++G+L  L    VGEN L  +P  IG L+
Sbjct: 307 NRLTRLP-EIGSLAALEELHAQSNRLTALPQSLGNLHALRLFYVGENQLTELPLSIGQLK 365

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
           +L + ++NDN  L+++P ELA C  LQ+++LD+ PL+ IP  +  GGPS ++ YL+
Sbjct: 366 SLTSFHVNDNR-LSDVPCELANCLKLQLLNLDDNPLTAIPPNVTSGGPSAVMVYLR 420



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 158/320 (49%), Gaps = 31/320 (9%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++  + +  LP  +  L  L+   L  N L  LP  I       C+ L E         
Sbjct: 116 LNVEYNKLERLPEEIGNLVKLKHFGLRYNSLVELPLAIK-----NCVLLEE--------- 161

Query: 166 LANLQQLRVLDLRHNKLNELPM-VVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
                    L++  NKL  LP  ++ +L ++  L L  N   T+  D+  L+ L + +M 
Sbjct: 162 ---------LNVEGNKLVVLPTGILSQLVNVNNLQLSRNNFTTIPADLGALTKLEIFNMD 212

Query: 225 DNKIRELPPEL-GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
           +N +RE+P  +   LK L  ++L +N +  +P +IG+   L  ++L  N+L  +P+ LG 
Sbjct: 213 NNSVREIPAGIFSSLKLLGKINLNYNSITSIPNDIGDLVSLREINLGSNKLELLPETLGQ 272

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L+NL  L L  N L ++PE+ S+ V L   ++EG  L+ LP+  + SL ++  +    N+
Sbjct: 273 LVNLESLVLGNNNLSALPESASRLVKLRVLDLEGNRLTRLPE--IGSLAALEELHAQSNR 330

Query: 344 FTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
            TA P S G      ++ +    NQ+ ++P  I  + K+L+  ++ DN L+ +P +L   
Sbjct: 331 LTALPQSLGNLHALRLFYVG--ENQLTELPLSI-GQLKSLTSFHVNDNRLSDVPCELANC 387

Query: 403 VGLTELNLGTNQISKLSEDI 422
           + L  LNL  N ++ +  ++
Sbjct: 388 LKLQLLNLDDNPLTAIPPNV 407


>gi|360042765|emb|CCD78175.1| putative shoc2 [Schistosoma mansoni]
          Length = 542

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 194/406 (47%), Positives = 267/406 (65%), Gaps = 8/406 (1%)

Query: 116 LPPSVEK-LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS--LPDSLANLQQL 172
           +P ++ K L+ +++L+LYGNKL +LPS I ++TNL  L L +N LT+  +P+ +  L  L
Sbjct: 121 IPNAIFKDLSFIKDLFLYGNKLTTLPSSISHLTNLKRLLLQQNWLTASGIPNEITKLTNL 180

Query: 173 RVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE- 230
             LDLR+N+L+  LP  +  L +L+ L L +N++  +  +I+YL  LS+L +  N IR+ 
Sbjct: 181 EQLDLRYNRLDGPLPTCICGLYNLEHLLLTYNKLTHIVDEIKYLKRLSVLVVSRNLIRQD 240

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +GEL  LV LDL+ NH+  LP  IG CT L  L+LQHN+L  +PD +GNL+NL RL
Sbjct: 241 LPSSIGELTKLVKLDLSFNHITFLPDSIGKCTSLRDLNLQHNQLTKLPDSIGNLVNLCRL 300

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            + YN+L  +P +L+ CV L+EFNVE   LSSLP+ LL  L ++ NITLSRN FT +PSG
Sbjct: 301 SIKYNQLVEIPASLANCVKLDEFNVENNQLSSLPNNLLPCLHNLLNITLSRNYFTNFPSG 360

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL--PLDLGTWVGLTEL 408
            P QF   Y+IN +HN+I  IP  +FS A NL K+N++DN L SL  P DL     L EL
Sbjct: 361 DPQQFQMCYTINMDHNEITNIPKSVFSLASNLIKLNLRDNALDSLIGP-DLHELKTLVEL 419

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           +LG+N++S+L  +I  LV LEVL L+ N L  LP  I  L KL+ LDLE N LESLPN++
Sbjct: 420 DLGSNRLSELPTEINKLVALEVLRLNYNQLTSLPDEITQLSKLRILDLESNLLESLPNDL 479

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             L  LQ L +  N+L + P +IG LT L  +  GEN++  IP EI
Sbjct: 480 SGLTSLQELNVLCNRLKTFPASIGQLTKLKVIMAGENDITDIPVEI 525



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 28/273 (10%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LDLS + IT LP S+ K T L +L L  N+L  LP  IG + NL  L +  N L  +
Sbjct: 251 LVKLDLSFNHITFLPDSIGKCTSLRDLNLQHNQLTKLPDSIGNLVNLCRLSIKYNQLVEI 310

Query: 163 PDSLANLQQLRVLDLRHNKLNELPM----VVYKLTSLKIL--YL---------RFNRIKT 207
           P SLAN  +L   ++ +N+L+ LP      ++ L ++ +   Y          +F    T
Sbjct: 311 PASLANCVKLDEFNVENNQLSSLPNNLLPCLHNLLNITLSRNYFTNFPSGDPQQFQMCYT 370

Query: 208 VHPD-----------IQYLSNLSMLSMRDNKIREL-PPELGELKNLVTLDLAHNHLEELP 255
           ++ D               SNL  L++RDN +  L  P+L ELK LV LDL  N L ELP
Sbjct: 371 INMDHNEITNIPKSVFSLASNLIKLNLRDNALDSLIGPDLHELKTLVELDLGSNRLSELP 430

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
            EI     L  L L +N+L ++PD +  L  L  L L  N LES+P  LS    L E NV
Sbjct: 431 TEINKLVALEVLRLNYNQLTSLPDEITQLSKLRILDLESNLLESLPNDLSGLTSLQELNV 490

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
               L + P   +  LT +  I    N  T  P
Sbjct: 491 LCNRLKTFPAS-IGQLTKLKVIMAGENDITDIP 522



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 160/361 (44%), Gaps = 57/361 (15%)

Query: 207 TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE--LPKEIGNCTML 264
            +  D+ ++ +L +     NK+  LP  +  L NL  L L  N L    +P EI   T L
Sbjct: 124 AIFKDLSFIKDLFLYG---NKLTTLPSSISHLTNLKRLLLQQNWLTASGIPNEITKLTNL 180

Query: 265 VTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSL 323
             LDL++N L   +P  +  L NL  L L+YN+L  + + +    +L   +V        
Sbjct: 181 EQLDLRYNRLDGPLPTCICGLYNLEHLLLTYNKLTHIVDEIK---YLKRLSV-------- 229

Query: 324 PDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
                        + +SRN                            +P  I    K L 
Sbjct: 230 -------------LVVSRNLIRQ-----------------------DLPSSIGELTK-LV 252

Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
           K+++  N +T LP  +G    L +LNL  NQ++KL + I NLVNL  L +  N L ++P+
Sbjct: 253 KLDLSFNHITFLPDSIGKCTSLRDLNLQHNQLTKLPDSIGNLVNLCRLSIKYNQLVEIPA 312

Query: 444 SIGNLRKLKCLDLEENKLESLPNEI-GFLKELQRLILQSNQLVSLPRAIGHLTNLSY-LS 501
           S+ N  KL   ++E N+L SLPN +   L  L  + L  N   + P        + Y ++
Sbjct: 313 SLANCVKLDEFNVENNQLSSLPNNLLPCLHNLLNITLSRNYFTNFPSGDPQQFQMCYTIN 372

Query: 502 VGENNLQSIPEEIGTL-ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
           +  N + +IP+ + +L  NL  L L DN   + I  +L     L  + L +  LS++P+E
Sbjct: 373 MDHNEITNIPKSVFSLASNLIKLNLRDNALDSLIGPDLHELKTLVELDLGSNRLSELPTE 432

Query: 561 I 561
           I
Sbjct: 433 I 433



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 64/116 (55%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + ++ LDL  + ++ LP  + KL  LE L L  N+L SLP +I  ++ L  L L  N L 
Sbjct: 414 KTLVELDLGSNRLSELPTEINKLVALEVLRLNYNQLTSLPDEITQLSKLRILDLESNLLE 473

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           SLP+ L+ L  L+ L++  N+L   P  + +LT LK++    N I  +  +I + S
Sbjct: 474 SLPNDLSGLTSLQELNVLCNRLKTFPASIGQLTKLKVIMAGENDITDIPVEIDFAS 529


>gi|119569934|gb|EAW49549.1| soc-2 suppressor of clear homolog (C. elegans), isoform CRA_b [Homo
           sapiens]
          Length = 221

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 155/220 (70%), Positives = 187/220 (85%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K+ ED+
Sbjct: 1   MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 60

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L+L +N
Sbjct: 61  SGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNN 120

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFELALCS
Sbjct: 121 QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCS 180

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
            L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 181 KLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 220



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 104/206 (50%), Gaps = 24/206 (11%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           L +L +  N+L SLP   G  T++  L LA N LT +P+ ++ L  L VL L +N L +L
Sbjct: 20  LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 79

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  +  L  L+                        L + +NK+  LP E+  LK+L  L 
Sbjct: 80  PHGLGNLRKLR-----------------------ELDLEENKLESLPNEIAYLKDLQKLV 116

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN-RLESVPETL 304
           L +N L  LP+ IG+ T L  L L  N L ++P+ +G L NL  L L+ N  L S+P  L
Sbjct: 117 LTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFEL 176

Query: 305 SKCVHLNEFNVEGCALSSLPDGLLSS 330
           + C  L+  ++E C LS LP  +++ 
Sbjct: 177 ALCSKLSIMSIENCPLSHLPPQIVAG 202



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 96/174 (55%), Gaps = 1/174 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++  + +T LP      T + EL L  N+L  +P  +  + +L  L L+ N L  LP  
Sbjct: 23  LNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHG 82

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L NL++LR LDL  NKL  LP  +  L  L+ L L  N++ T+   I +L+NL+ L + +
Sbjct: 83  LGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGE 142

Query: 226 NKIRELPPELGELKNLVTLDLAHN-HLEELPKEIGNCTMLVTLDLQHNELVNIP 278
           N +  LP E+G L+NL  L L  N +L  LP E+  C+ L  + +++  L ++P
Sbjct: 143 NLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 196



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 28/225 (12%)

Query: 223 MRDNKIRELPPEL-GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           M  N+I ++P  +    K L  L++  N L  LP + G  T +V L+L  N+L  IP+ +
Sbjct: 1   MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 60

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L++L  L LS N L+ +P  L     L E ++E   L SLP+  ++ L  +  + L+ 
Sbjct: 61  SGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTN 119

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P G                              NL+ + + +NLLT LP ++GT
Sbjct: 120 NQLTTLPRG-------------------------IGHLTNLTHLGLGENLLTHLPEEIGT 154

Query: 402 WVGLTELNLGTN-QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
              L EL L  N  +  L  ++     L ++ + N  L  LP  I
Sbjct: 155 LENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 199



 Score = 40.0 bits (92), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 2/99 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN-SLTSLPD 164
           L L+ + +T LP  +  LT+L  L L  N L  LP +IG + NL  L L +N +L SLP 
Sbjct: 115 LVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPF 174

Query: 165 SLANLQQLRVLDLRHNKLNEL-PMVVYKLTSLKILYLRF 202
            LA   +L ++ + +  L+ L P +V    S  I +L+ 
Sbjct: 175 ELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKM 213


>gi|194373409|dbj|BAG56800.1| unnamed protein product [Homo sapiens]
          Length = 221

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 154/220 (70%), Positives = 186/220 (84%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHN+I+KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K+ ED+
Sbjct: 1   MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 60

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             LV+LEVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI + K+LQ+L+L +N
Sbjct: 61  SGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYFKDLQKLVLTNN 120

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL +LPR IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFELALCS
Sbjct: 121 QLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCS 180

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
            L IMS++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 181 KLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 220



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 103/206 (50%), Gaps = 24/206 (11%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           L +L +  N+L SLP   G  T++  L LA N LT +P+ ++ L  L VL L +N L +L
Sbjct: 20  LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 79

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  +  L  L+                        L + +NK+  LP E+   K+L  L 
Sbjct: 80  PHGLGNLRKLR-----------------------ELDLEENKLESLPNEIAYFKDLQKLV 116

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN-RLESVPETL 304
           L +N L  LP+ IG+ T L  L L  N L ++P+ +G L NL  L L+ N  L S+P  L
Sbjct: 117 LTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFEL 176

Query: 305 SKCVHLNEFNVEGCALSSLPDGLLSS 330
           + C  L+  ++E C LS LP  +++ 
Sbjct: 177 ALCSKLSIMSIENCPLSHLPPQIVAG 202



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 1/174 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++  + +T LP      T + EL L  N+L  +P  +  + +L  L L+ N L  LP  
Sbjct: 23  LNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHG 82

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L NL++LR LDL  NKL  LP  +     L+ L L  N++ T+   I +L+NL+ L + +
Sbjct: 83  LGNLRKLRELDLEENKLESLPNEIAYFKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGE 142

Query: 226 NKIRELPPELGELKNLVTLDLAHN-HLEELPKEIGNCTMLVTLDLQHNELVNIP 278
           N +  LP E+G L+NL  L L  N +L  LP E+  C+ L  + +++  L ++P
Sbjct: 143 NLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 196



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 103/225 (45%), Gaps = 28/225 (12%)

Query: 223 MRDNKIRELPPEL-GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           M  N+I ++P  +    K L  L++  N L  LP + G  T +V L+L  N+L  IP+ +
Sbjct: 1   MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 60

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L++L  L LS N L+ +P  L     L E ++E   L SLP+ +              
Sbjct: 61  SGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEI-------------- 106

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
               AY       F  +  +   +NQ+  +P GI     NL+ + + +NLLT LP ++GT
Sbjct: 107 ----AY-------FKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLPEEIGT 154

Query: 402 WVGLTELNLGTN-QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
              L EL L  N  +  L  ++     L ++ + N  L  LP  I
Sbjct: 155 LENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 199



 Score = 40.0 bits (92), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 2/99 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN-SLTSLPD 164
           L L+ + +T LP  +  LT+L  L L  N L  LP +IG + NL  L L +N +L SLP 
Sbjct: 115 LVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPF 174

Query: 165 SLANLQQLRVLDLRHNKLNEL-PMVVYKLTSLKILYLRF 202
            LA   +L ++ + +  L+ L P +V    S  I +L+ 
Sbjct: 175 ELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKM 213


>gi|15489236|gb|AAH13722.1| Shoc2 protein, partial [Mus musculus]
          Length = 215

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 151/214 (70%), Positives = 182/214 (85%)

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
           +KIP+GIFSRAK LSK+NMKDN LTSLPLD GTW  + ELNL TNQ++K+ ED+  LV+L
Sbjct: 1   NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 60

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           EVL+LSNNLLKKLP  +GNLRKL+ LDLEENKLESLPNEI +LK+LQ+L+L +NQL +LP
Sbjct: 61  EVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLSTLP 120

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMS 548
           R IGHLTNL++L +GEN L  +PEEIGTLENL  LYLNDN  L+++PFELALCS L IMS
Sbjct: 121 RGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMS 180

Query: 549 LDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           ++NCPLS +P +IV GGPS II++LKMQGPYR M
Sbjct: 181 IENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 214



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 104/206 (50%), Gaps = 24/206 (11%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           L +L +  N+L SLP   G  T++  L LA N LT +P+ ++ L  L VL L +N L +L
Sbjct: 14  LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 73

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  +  L  L+                        L + +NK+  LP E+  LK+L  L 
Sbjct: 74  PHGLGNLRKLR-----------------------ELDLEENKLESLPNEIAYLKDLQKLV 110

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN-RLESVPETL 304
           L +N L  LP+ IG+ T L  L L  N L ++P+ +G L NL  L L+ N  L S+P  L
Sbjct: 111 LTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFEL 170

Query: 305 SKCVHLNEFNVEGCALSSLPDGLLSS 330
           + C  L+  ++E C LS LP  +++ 
Sbjct: 171 ALCSKLSIMSIENCPLSHLPPQIVAG 196



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 96/174 (55%), Gaps = 1/174 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++  + +T LP      T + EL L  N+L  +P  +  + +L  L L+ N L  LP  
Sbjct: 17  LNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHG 76

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L NL++LR LDL  NKL  LP  +  L  L+ L L  N++ T+   I +L+NL+ L + +
Sbjct: 77  LGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGE 136

Query: 226 NKIRELPPELGELKNLVTLDLAHN-HLEELPKEIGNCTMLVTLDLQHNELVNIP 278
           N +  LP E+G L+NL  L L  N +L  LP E+  C+ L  + +++  L ++P
Sbjct: 137 NLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 190



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 27/208 (12%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           K L  L++  N L  LP + G  T +V L+L  N+L  IP+ +  L++L  L LS N L+
Sbjct: 12  KVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 71

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
            +P  L     L E ++E   L SLP+  ++ L  +  + L+ N+ +  P G        
Sbjct: 72  KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLSTLPRG-------- 122

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN-QISK 417
                                 NL+ + + +NLLT LP ++GT   L EL L  N  +  
Sbjct: 123 -----------------IGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHS 165

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           L  ++     L ++ + N  L  LP  I
Sbjct: 166 LPFELALCSKLSIMSIENCPLSHLPPQI 193


>gi|402583919|gb|EJW77862.1| hypothetical protein WUBG_11228 [Wuchereria bancrofti]
          Length = 222

 Score =  305 bits (782), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 145/220 (65%), Positives = 186/220 (84%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            EHN I KIP+GIFS+A  L+K+N+K+N LTS+PLD+G W+ +TELNL TNQ+  L +D+
Sbjct: 1   MEHNGIAKIPFGIFSKATGLTKLNLKENALTSMPLDMGCWLAMTELNLSTNQLRVLPDDV 60

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             LVNLEVLVLSNN+LKKLPS IG+L+KL+ LDLEEN+L+++PNEIGF+  L +L +QSN
Sbjct: 61  DKLVNLEVLVLSNNMLKKLPSQIGSLKKLRELDLEENELDAIPNEIGFVSSLTKLWIQSN 120

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           +LV LPR IG+LTNL+ L  GENNL S+PEEIG L++L +LY+NDN  L+N+PFELALC+
Sbjct: 121 KLVGLPRTIGNLTNLTDLRAGENNLTSLPEEIGNLDSLKSLYINDNPSLHNLPFELALCA 180

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           +L+IMS++NCPLSQIP EI  GGPSL+I+YLKMQGPYR M
Sbjct: 181 SLEIMSIENCPLSQIPPEITAGGPSLVIQYLKMQGPYRVM 220



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 99/216 (45%), Gaps = 48/216 (22%)

Query: 134 NKLASLPSQI-GYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKL 192
           N +A +P  I    T LT L L EN+LTS+P  +     +  L+L  N+L  LP      
Sbjct: 4   NGIAKIPFGIFSKATGLTKLNLKENALTSMPLDMGCWLAMTELNLSTNQLRVLP------ 57

Query: 193 TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLE 252
                             D+  L NL +L + +N +++LP ++G LK L  LDL  N L+
Sbjct: 58  -----------------DDVDKLVNLEVLVLSNNMLKKLPSQIGSLKKLRELDLEENELD 100

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE---------- 302
            +P EIG  + L  L +Q N+LV +P  +GNL NLT LR   N L S+PE          
Sbjct: 101 AIPNEIGFVSSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENNLTSLPEEIGNLDSLKS 160

Query: 303 --------------TLSKCVHLNEFNVEGCALSSLP 324
                          L+ C  L   ++E C LS +P
Sbjct: 161 LYINDNPSLHNLPFELALCASLEIMSIENCPLSQIP 196



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 98/181 (54%), Gaps = 1/181 (0%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K   +  L+L ++++T +P  +     + EL L  N+L  LP  +  + NL  L L+ N 
Sbjct: 16  KATGLTKLNLKENALTSMPLDMGCWLAMTELNLSTNQLRVLPDDVDKLVNLEVLVLSNNM 75

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP  + +L++LR LDL  N+L+ +P  +  ++SL  L+++ N++  +   I  L+NL
Sbjct: 76  LKKLPSQIGSLKKLRELDLEENELDAIPNEIGFVSSLTKLWIQSNKLVGLPRTIGNLTNL 135

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHN-HLEELPKEIGNCTMLVTLDLQHNELVNI 277
           + L   +N +  LP E+G L +L +L +  N  L  LP E+  C  L  + +++  L  I
Sbjct: 136 TDLRAGENNLTSLPEEIGNLDSLKSLYINDNPSLHNLPFELALCASLEIMSIENCPLSQI 195

Query: 278 P 278
           P
Sbjct: 196 P 196



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 94/161 (58%), Gaps = 3/161 (1%)

Query: 177 LRHNKLNELPMVVY-KLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           + HN + ++P  ++ K T L  L L+ N + ++  D+     ++ L++  N++R LP ++
Sbjct: 1   MEHNGIAKIPFGIFSKATGLTKLNLKENALTSMPLDMGCWLAMTELNLSTNQLRVLPDDV 60

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
            +L NL  L L++N L++LP +IG+   L  LDL+ NEL  IP+ +G + +LT+L +  N
Sbjct: 61  DKLVNLEVLVLSNNMLKKLPSQIGSLKKLRELDLEENELDAIPNEIGFVSSLTKLWIQSN 120

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSI 334
           +L  +P T+    +L +       L+SLP+  G L SL S+
Sbjct: 121 KLVGLPRTIGNLTNLTDLRAGENNLTSLPEEIGNLDSLKSL 161


>gi|256073912|ref|XP_002573271.1| shoc2 [Schistosoma mansoni]
          Length = 515

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 174/364 (47%), Positives = 236/364 (64%), Gaps = 5/364 (1%)

Query: 156 ENSLTS--LPDSLANLQQLRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
           +N LT+  +P+ +  L  L  LDLR+N+L+  LP  +  L +L+ L L +N++  +  +I
Sbjct: 135 QNWLTASGIPNEITKLTNLEQLDLRYNRLDGPLPTCICGLYNLEHLLLTYNKLTHIVDEI 194

Query: 213 QYLSNLSMLSMRDNKIRE-LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
           +YL  LS+L +  N IR+ LP  +GEL  LV LDL+ NH+  LP  IG CT L  L+LQH
Sbjct: 195 KYLKRLSVLVVSRNLIRQDLPSSIGELTKLVKLDLSFNHITFLPDSIGKCTSLRDLNLQH 254

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           N+L  +PD +GNL+NL RL + YN+L  +P +L+ CV L+EFNVE   LSSLP+ LL  L
Sbjct: 255 NQLTKLPDSIGNLVNLCRLSIKYNQLVEIPASLANCVKLDEFNVENNQLSSLPNNLLPCL 314

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
            ++ NITLSRN FT +PSG P QF   Y+IN +HN+I  IP  +FS A NL K+N++DN 
Sbjct: 315 HNLLNITLSRNYFTNFPSGDPQQFQMCYTINMDHNEITNIPKSVFSLASNLIKLNLRDNA 374

Query: 392 LTSL-PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
           L SL   DL     L EL+LG+N++S+L  +I  LV LEVL L+ N L  LP  I  L K
Sbjct: 375 LDSLIGPDLHELKTLVELDLGSNRLSELPTEINKLVALEVLRLNYNQLTSLPDEITQLSK 434

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L+ LDLE N LESLPN++  L  LQ L +  N+L + P +IG LT L  +  GEN++  I
Sbjct: 435 LRILDLESNLLESLPNDLSGLTSLQELNVLCNRLKTFPASIGQLTKLKVIMAGENDITDI 494

Query: 511 PEEI 514
           P EI
Sbjct: 495 PVEI 498



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 28/273 (10%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LDLS + IT LP S+ K T L +L L  N+L  LP  IG + NL  L +  N L  +
Sbjct: 224 LVKLDLSFNHITFLPDSIGKCTSLRDLNLQHNQLTKLPDSIGNLVNLCRLSIKYNQLVEI 283

Query: 163 PDSLANLQQLRVLDLRHNKLNELPM----VVYKLTSLKIL--YL---------RFNRIKT 207
           P SLAN  +L   ++ +N+L+ LP      ++ L ++ +   Y          +F    T
Sbjct: 284 PASLANCVKLDEFNVENNQLSSLPNNLLPCLHNLLNITLSRNYFTNFPSGDPQQFQMCYT 343

Query: 208 VHPD-----------IQYLSNLSMLSMRDNKIREL-PPELGELKNLVTLDLAHNHLEELP 255
           ++ D               SNL  L++RDN +  L  P+L ELK LV LDL  N L ELP
Sbjct: 344 INMDHNEITNIPKSVFSLASNLIKLNLRDNALDSLIGPDLHELKTLVELDLGSNRLSELP 403

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
            EI     L  L L +N+L ++PD +  L  L  L L  N LES+P  LS    L E NV
Sbjct: 404 TEINKLVALEVLRLNYNQLTSLPDEITQLSKLRILDLESNLLESLPNDLSGLTSLQELNV 463

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
               L + P   +  LT +  I    N  T  P
Sbjct: 464 LCNRLKTFP-ASIGQLTKLKVIMAGENDITDIP 495



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 177/378 (46%), Gaps = 54/378 (14%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAE 156
           C   N+ +L L+ + +TH+   ++ L  L  L +  N +   LPS IG +T L  L L+ 
Sbjct: 172 CGLYNLEHLLLTYNKLTHIVDEIKYLKRLSVLVVSRNLIRQDLPSSIGELTKLVKLDLSF 231

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N +T LPDS+     LR L+L+HN+L +LP  +  L +L  L +++N++  +   +    
Sbjct: 232 NHITFLPDSIGKCTSLRDLNLQHNQLTKLPDSIGNLVNLCRLSIKYNQLVEIPASLANCV 291

Query: 217 NLSMLSMRDNKIRELPPELGE-LKNLVTLDLAHNHLEELPK-EIGNCTMLVTLDLQHNEL 274
            L   ++ +N++  LP  L   L NL+ + L+ N+    P  +     M  T+++ HNE+
Sbjct: 292 KLDEFNVENNQLSSLPNNLLPCLHNLLNITLSRNYFTNFPSGDPQQFQMCYTINMDHNEI 351

Query: 275 VNIPDMLGNLI-NLTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
            NIP  + +L  NL +L L  N L+S +   L +   L E ++    LS LP       T
Sbjct: 352 TNIPKSVFSLASNLIKLNLRDNALDSLIGPDLHELKTLVELDLGSNRLSELP-------T 404

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            IN                  +  ++  +   +NQ+  +P  I   +K L  ++++ NLL
Sbjct: 405 EIN------------------KLVALEVLRLNYNQLTSLPDEITQLSK-LRILDLESNLL 445

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
            SLP DL     L ELN+  N+                       LK  P+SIG L KLK
Sbjct: 446 ESLPNDLSGLTSLQELNVLCNR-----------------------LKTFPASIGQLTKLK 482

Query: 453 CLDLEENKLESLPNEIGF 470
            +   EN +  +P EI F
Sbjct: 483 VIMAGENDITDIPVEIDF 500



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 139/312 (44%), Gaps = 52/312 (16%)

Query: 254 LPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +P EI   T L  LDL++N L   +P  +  L NL  L L+YN+L  + + +    +L  
Sbjct: 143 IPNEITKLTNLEQLDLRYNRLDGPLPTCICGLYNLEHLLLTYNKLTHIVDEIK---YLKR 199

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            +V                     + +SRN                            +P
Sbjct: 200 LSV---------------------LVVSRNLIRQ-----------------------DLP 215

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I    K L K+++  N +T LP  +G    L +LNL  NQ++KL + I NLVNL  L 
Sbjct: 216 SSIGELTK-LVKLDLSFNHITFLPDSIGKCTSLRDLNLQHNQLTKLPDSIGNLVNLCRLS 274

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI-GFLKELQRLILQSNQLVSLPRAI 491
           +  N L ++P+S+ N  KL   ++E N+L SLPN +   L  L  + L  N   + P   
Sbjct: 275 IKYNQLVEIPASLANCVKLDEFNVENNQLSSLPNNLLPCLHNLLNITLSRNYFTNFPSGD 334

Query: 492 GHLTNLSY-LSVGENNLQSIPEEIGTL-ENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
                + Y +++  N + +IP+ + +L  NL  L L DN   + I  +L     L  + L
Sbjct: 335 PQQFQMCYTINMDHNEITNIPKSVFSLASNLIKLNLRDNALDSLIGPDLHELKTLVELDL 394

Query: 550 DNCPLSQIPSEI 561
            +  LS++P+EI
Sbjct: 395 GSNRLSELPTEI 406



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 64/116 (55%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + ++ LDL  + ++ LP  + KL  LE L L  N+L SLP +I  ++ L  L L  N L 
Sbjct: 387 KTLVELDLGSNRLSELPTEINKLVALEVLRLNYNQLTSLPDEITQLSKLRILDLESNLLE 446

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           SLP+ L+ L  L+ L++  N+L   P  + +LT LK++    N I  +  +I + S
Sbjct: 447 SLPNDLSGLTSLQELNVLCNRLKTFPASIGQLTKLKVIMAGENDITDIPVEIDFAS 502


>gi|421097204|ref|ZP_15557898.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410799695|gb|EKS01761.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 671

 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 188/478 (39%), Positives = 284/478 (59%), Gaps = 25/478 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS++ +  LP  + KL +L+ELYL  NKL +LP  IG + NL  L L+ N L +LP  
Sbjct: 165 LDLSRNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNKLEALPKE 224

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L  LDL HN+L  LP  + +L +L+IL LR+N+++T+  +I  L NL  L + +
Sbjct: 225 IGKLRNLPKLDLSHNQLETLPEEIGQLQNLQILDLRYNQLETLPEEIGQLQNLRELHLYN 284

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK++ LP E+G+LKNL TL+L+ N LE LP+EIGN   L TL+LQ+N L  +P+ +G L 
Sbjct: 285 NKLKALPKEIGKLKNLRTLNLSTNKLEALPEEIGNLKNLRTLNLQYNPLKTLPEEIGKLQ 344

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL------------------ 327
           NL  L LS+N+LE++P+ + +  +L + ++    L +LP  +                  
Sbjct: 345 NLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQALPKEIGQLQNLRELHLYNNQLET 404

Query: 328 ----LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
               +  L ++  + LS NK  A P     Q  ++  ++  +NQ++ +P  I  + +NL 
Sbjct: 405 LPEEIGKLQNLQILDLSHNKLEALPK-EIGQLQNLQILDLRYNQLEALPKEI-GKLQNLQ 462

Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
           ++N++ N L +LP ++G    L +LNL  NQ+  L ++I  L NL+ L L  N LK LP 
Sbjct: 463 ELNLRYNKLEALPKEIGKLKNLQKLNLQYNQLKTLPKEIGKLKNLQKLNLQYNQLKTLPK 522

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
            IG L+ L+ LDL  N+L++LP EIG L+ LQ L L+ N+L +LP+ IG L NL  L + 
Sbjct: 523 DIGKLKNLRELDLRNNQLKTLPKEIGKLQNLQELNLRYNKLETLPKEIGKLRNLKILYLS 582

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N LQ++P+EI  L NL  LYL+ N  L  +P E+    NLQ + L N PL  +P +I
Sbjct: 583 HNQLQALPKEIEKLVNLRKLYLSGNQ-LQALPKEIGKLQNLQGLDLGNNPLKTLPKDI 639



 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 188/463 (40%), Positives = 273/463 (58%), Gaps = 4/463 (0%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  LDLS + +  LP  + +L +L ELYL  NKL +LP  IG + NL  L L  N 
Sbjct: 66  KLKNLQELDLSHNQLQALPEDIGQLQNLRELYLSDNKLEALPEDIGNLKNLRTLHLYNNQ 125

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L +LP+ +  LQ L+ L L  NKL  LP  +  L +L+IL L  N++KT+  +I  L NL
Sbjct: 126 LKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNQLKTLPEEIGKLQNL 185

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L + DNK+  LP ++G LKNL  LDL+ N LE LPKEIG    L  LDL HN+L  +P
Sbjct: 186 QELYLSDNKLEALPEDIGNLKNLQILDLSRNKLEALPKEIGKLRNLPKLDLSHNQLETLP 245

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           + +G L NL  L L YN+LE++PE + +  +L E ++    L +LP   +  L ++  + 
Sbjct: 246 EEIGQLQNLQILDLRYNQLETLPEEIGQLQNLRELHLYNNKLKALPKE-IGKLKNLRTLN 304

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           LS NK  A P        ++ ++N ++N +  +P  I  + +NL ++++  N L +LP +
Sbjct: 305 LSTNKLEALPE-EIGNLKNLRTLNLQYNPLKTLPEEI-GKLQNLPELDLSHNKLEALPKE 362

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L +L+L  NQ+  L ++I  L NL  L L NN L+ LP  IG L+ L+ LDL  
Sbjct: 363 IGQLQNLPKLDLSHNQLQALPKEIGQLQNLRELHLYNNQLETLPEEIGKLQNLQILDLSH 422

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           NKLE+LP EIG L+ LQ L L+ NQL +LP+ IG L NL  L++  N L+++P+EIG L+
Sbjct: 423 NKLEALPKEIGQLQNLQILDLRYNQLEALPKEIGKLQNLQELNLRYNKLEALPKEIGKLK 482

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           NL  L L  N  L  +P E+    NLQ ++L    L  +P +I
Sbjct: 483 NLQKLNLQYNQ-LKTLPKEIGKLKNLQKLNLQYNQLKTLPKDI 524



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 160/402 (39%), Positives = 240/402 (59%), Gaps = 4/402 (0%)

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           T L  +LAN  ++ VLDL  NKL  LP  + KL +L+ L L  N+++ +  DI  L NL 
Sbjct: 35  TDLRKALANPSKVFVLDLSSNKLKTLPKEIGKLKNLQELDLSHNQLQALPEDIGQLQNLR 94

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L + DNK+  LP ++G LKNL TL L +N L+ LP+EIG    L  L L  N+L  +P+
Sbjct: 95  ELYLSDNKLEALPEDIGNLKNLRTLHLYNNQLKTLPEEIGKLQNLQELYLSDNKLEALPE 154

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +GNL NL  L LS N+L+++PE + K  +L E  +    L +LP+  + +L ++  + L
Sbjct: 155 DIGNLKNLQILDLSRNQLKTLPEEIGKLQNLQELYLSDNKLEALPED-IGNLKNLQILDL 213

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           SRNK  A P     +  ++  ++  HNQ++ +P  I  + +NL  ++++ N L +LP ++
Sbjct: 214 SRNKLEALPK-EIGKLRNLPKLDLSHNQLETLPEEI-GQLQNLQILDLRYNQLETLPEEI 271

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G    L EL+L  N++  L ++I  L NL  L LS N L+ LP  IGNL+ L+ L+L+ N
Sbjct: 272 GQLQNLRELHLYNNKLKALPKEIGKLKNLRTLNLSTNKLEALPEEIGNLKNLRTLNLQYN 331

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
            L++LP EIG L+ L  L L  N+L +LP+ IG L NL  L +  N LQ++P+EIG L+N
Sbjct: 332 PLKTLPEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQALPKEIGQLQN 391

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L+L +N  L  +P E+    NLQI+ L +  L  +P EI
Sbjct: 392 LRELHLYNNQ-LETLPEEIGKLQNLQILDLSHNKLEALPKEI 432



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 132/353 (37%), Positives = 196/353 (55%), Gaps = 26/353 (7%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  LDLS + +  LP  + +L +L +L L  N+L +LP +IG + NL  L L  N 
Sbjct: 342 KLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQALPKEIGQLQNLRELHLYNNQ 401

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L +LP+ +  LQ L++LDL HNKL  LP  + +L +L+IL LR+N+++ +  +I  L NL
Sbjct: 402 LETLPEEIGKLQNLQILDLSHNKLEALPKEIGQLQNLQILDLRYNQLEALPKEIGKLQNL 461

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++R NK+  LP E+G+LKNL  L+L +N L+ LPKEIG    L  L+LQ+N+L  +P
Sbjct: 462 QELNLRYNKLEALPKEIGKLKNLQKLNLQYNQLKTLPKEIGKLKNLQKLNLQYNQLKTLP 521

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L NL  L L  N+L+++P+ + K  +L E N+    L +LP            I 
Sbjct: 522 KDIGKLKNLRELDLRNNQLKTLPKEIGKLQNLQELNLRYNKLETLPK----------EIG 571

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
             RN    Y S               HNQ+  +P  I  +  NL K+ +  N L +LP +
Sbjct: 572 KLRNLKILYLS---------------HNQLQALPKEI-EKLVNLRKLYLSGNQLQALPKE 615

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           +G    L  L+LG N +  L +DI  L +L+ L L N  L+ LP  IG L +L
Sbjct: 616 IGKLQNLQGLDLGNNPLKTLPKDIGKLKSLQTLCLDNKQLESLPIEIGKLGEL 668



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 54/90 (60%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           LS + +  LP  +EKL +L +LYL GN+L +LP +IG + NL  L L  N L +LP  + 
Sbjct: 581 LSHNQLQALPKEIEKLVNLRKLYLSGNQLQALPKEIGKLQNLQGLDLGNNPLKTLPKDIG 640

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
            L+ L+ L L + +L  LP+ + KL  L I
Sbjct: 641 KLKSLQTLCLDNKQLESLPIEIGKLGELCI 670


>gi|195110657|ref|XP_001999896.1| GI22824 [Drosophila mojavensis]
 gi|193916490|gb|EDW15357.1| GI22824 [Drosophila mojavensis]
          Length = 471

 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 154/339 (45%), Positives = 223/339 (65%), Gaps = 5/339 (1%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           LDL+ + +  LP  +  C  L  L L  N++V +P  +G L+NL  L L+ N L S+PE+
Sbjct: 138 LDLSKSSITVLPTTVRECVHLTELYLYSNKIVQLPAEIGCLVNLRNLALNENSLTSLPES 197

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           L  C  L   ++    L+ +P  ++  L S+  + L  N+ TA  +    Q  ++  ++ 
Sbjct: 198 LRNCTQLKVLDLRHNKLAEIPP-VIYQLRSLTTLYLRFNRITAV-ADDLRQLVNLTMLSL 255

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
             N+I ++   I S   NL+ +++  N L  LP D+G  V L  L+L  N++  + + I 
Sbjct: 256 RENKIKELGSAIGSLV-NLTTLDVSHNHLEHLPDDIGNCVNLNALDLQHNELLDIPDSIG 314

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           N  NLE+L+LSNN+LKK+P++IGNLRKL+ LDLEEN++E LP+E+G L ELQRLILQ+NQ
Sbjct: 315 N--NLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEVGLLHELQRLILQTNQ 372

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
           +  LPR+IGHL+NL++LSV ENNLQ +PEEIG+LE+L  LY+N N  L  +PFELALC N
Sbjct: 373 ITMLPRSIGHLSNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQN 432

Query: 544 LQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           L+ +++D CPL  IP EI  GGPSL++++LKM  PYR M
Sbjct: 433 LKYLNIDKCPLGTIPPEIQAGGPSLVLQWLKMHSPYRQM 471



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 158/366 (43%), Positives = 208/366 (56%), Gaps = 56/366 (15%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLSKSSIT LP +V +  HL ELYLY NK+  LP++IG + NL  L L ENSLTSLP+S
Sbjct: 138 LDLSKSSITVLPTTVRECVHLTELYLYSNKIVQLPAEIGCLVNLRNLALNENSLTSLPES 197

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L N  QL+VLDLRHNKL E+P V+Y+L SL  LYLRFNRI  V  D++ L NL+MLS+R+
Sbjct: 198 LRNCTQLKVLDLRHNKLAEIPPVIYQLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRE 257

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NKI+EL   +G L NL TLD++HNHLE LP +IGNC  L  LDLQHNEL++IPD +GN  
Sbjct: 258 NKIKELGSAIGSLVNLTTLDVSHNHLEHLPDDIGNCVNLNALDLQHNELLDIPDSIGN-- 315

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNK 343
           NL  L LS N L+ +P T+     L   ++E   +  LP   GLL  L            
Sbjct: 316 NLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEVGLLHELQ----------- 364

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
                            +  + NQI  +P  I                        G   
Sbjct: 365 ----------------RLILQTNQITMLPRSI------------------------GHLS 384

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN-LLKKLPSSIGNLRKLKCLDLEENKLE 462
            LT L++  N +  L E+I +L +LE L ++ N  L+KLP  +   + LK L++++  L 
Sbjct: 385 NLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPLG 444

Query: 463 SLPNEI 468
           ++P EI
Sbjct: 445 TIPPEI 450



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 1/138 (0%)

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           N + +++L LS + +  LP+++     L  L L  NK+  LP EIG L  L+ L L  N 
Sbjct: 131 NGIRIKLLDLSKSSITVLPTTVRECVHLTELYLYSNKIVQLPAEIGCLVNLRNLALNENS 190

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
           L SLP ++ + T L  L +  N L  IP  I  L +L TLYL  N  +  +  +L    N
Sbjct: 191 LTSLPESLRNCTQLKVLDLRHNKLAEIPPVIYQLRSLTTLYLRFNR-ITAVADDLRQLVN 249

Query: 544 LQIMSLDNCPLSQIPSEI 561
           L ++SL    + ++ S I
Sbjct: 250 LTMLSLRENKIKELGSAI 267


>gi|195144232|ref|XP_002013100.1| GL23942 [Drosophila persimilis]
 gi|194102043|gb|EDW24086.1| GL23942 [Drosophila persimilis]
          Length = 333

 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 133/220 (60%), Positives = 168/220 (76%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           LYLY NK+  LP++IG + NL  L L ENSLTSLP+SL N +QL+VLDLRHNKL E+P V
Sbjct: 1   LYLYSNKIGQLPAEIGCLVNLRNLALNENSLTSLPESLQNCKQLKVLDLRHNKLAEIPPV 60

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           +Y+L +L  LYLRFNRI  V  +++ L NL+MLS+R+NKIREL   +G L NL TLD++H
Sbjct: 61  IYRLRTLTTLYLRFNRITAVADNLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSH 120

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           NHLE LP++IGNC  L  LDLQHNEL++IPD +GNL +L RL L YNRL SVP TL  C 
Sbjct: 121 NHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLSSVPATLKNCK 180

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            ++EFNVEG  ++ LPDG+L+SL+ +  ITLSRN+FT  P
Sbjct: 181 SMDEFNVEGNGMTQLPDGMLASLSGLTTITLSRNQFTQLP 220



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 87/154 (56%), Gaps = 1/154 (0%)

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           L L +N+I +L  +I  LVNL  L L+ N L  LP S+ N ++LK LDL  NKL  +P  
Sbjct: 1   LYLYSNKIGQLPAEIGCLVNLRNLALNENSLTSLPESLQNCKQLKVLDLRHNKLAEIPPV 60

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
           I  L+ L  L L+ N++ ++   +  L NL+ LS+ EN ++ +   IG L NL TL ++ 
Sbjct: 61  IYRLRTLTTLYLRFNRITAVADNLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSH 120

Query: 528 NTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N  L ++P ++  C NL  + L +  L  IP  I
Sbjct: 121 NH-LEHLPEDIGNCVNLSALDLQHNELLDIPDSI 153



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 91/172 (52%), Gaps = 1/172 (0%)

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
           N +  LP ++G  V L  L L  N ++ L E +QN   L+VL L +N L ++P  I  LR
Sbjct: 6   NKIGQLPAEIGCLVNLRNLALNENSLTSLPESLQNCKQLKVLDLRHNKLAEIPPVIYRLR 65

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            L  L L  N++ ++ + +  L  L  L L+ N++  L  AIG L NL+ L V  N+L+ 
Sbjct: 66  TLTTLYLRFNRITAVADNLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEH 125

Query: 510 IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +PE+IG   NL  L L  N  L +IP  +    +L  + L    LS +P+ +
Sbjct: 126 LPEDIGNCVNLSALDLQHNELL-DIPDSIGNLKSLVRLGLRYNRLSSVPATL 176



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 95/179 (53%)

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           K L  ++++ N L  +P  +     LT L L  N+I+ ++++++ LVNL +L L  N ++
Sbjct: 42  KQLKVLDLRHNKLAEIPPVIYRLRTLTTLYLRFNRITAVADNLRQLVNLTMLSLRENKIR 101

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
           +L S+IG L  L  LD+  N LE LP +IG    L  L LQ N+L+ +P +IG+L +L  
Sbjct: 102 ELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVR 161

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L +  N L S+P  +   +++    +  N         LA  S L  ++L     +Q+P
Sbjct: 162 LGLRYNRLSSVPATLKNCKSMDEFNVEGNGMTQLPDGMLASLSGLTTITLSRNQFTQLP 220


>gi|421099978|ref|ZP_15560620.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796959|gb|EKR99076.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 580

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 186/483 (38%), Positives = 281/483 (58%), Gaps = 35/483 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT--SLP 163
           LDL+ + +T LP  + KL +L++L LY N+L ++P +IGY+  L  L L+ N LT  +LP
Sbjct: 42  LDLNNNQLTTLPKDIGKLQNLQKLNLYNNQLTTIPKEIGYLKELQELNLSRNQLTTLTLP 101

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           + +  LQ+L    L +N+L  LP  + KL +L+ LYL  N++KT+  +I YL  L  L +
Sbjct: 102 NKIGQLQKLY---LDNNQLKTLPKEIGKLQNLQELYLTNNQLKTLPKEIGYLKELQDLDL 158

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIG----------NCTMLVT------- 266
           RDN++  LP E+G+L+NL  LDL+ N L+ LPKEIG          N   L T       
Sbjct: 159 RDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLRELDLNDNQLKTLPKEIGY 218

Query: 267 ------LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
                 LDL+ N+L  +P+ +G L NL +L LS N+L+++P+ + K  +L E  + G  L
Sbjct: 219 LKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLQELYLYGNQL 278

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
            +LP   +  L  +  + LS NK T  P   G   +  ++  ++   NQ+  +P  I   
Sbjct: 279 KTLPKE-IGYLKELQVLHLSDNKLTTLPKEIGQLQKLQAL--LHLGDNQLKTLPKDI-GY 334

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
            K L  +++  N L +LP D+G    L +L L +NQ+  L +DI  L NL+VL LSNN L
Sbjct: 335 LKELQLLDLSGNQLKTLPKDIGQLQKLQDLELDSNQLKTLPKDIGKLQNLQVLNLSNNQL 394

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           K LP  IG L+KL+ L+L  N+L++LP EIG L++LQ L L  N+L +LP+ I  L NL 
Sbjct: 395 KTLPKDIGQLQKLRVLELYNNQLKTLPKEIGQLQKLQELNLSHNKLTTLPKDIEKLQNLQ 454

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L++  N L+++P+EIG L+NL  L L+ N  L  +P ++    NLQ + L N  L+ +P
Sbjct: 455 VLNLTNNQLKTLPKEIGQLQNLQVLNLSHNK-LTTLPKDIGKLQNLQELYLTNNQLTTLP 513

Query: 559 SEI 561
            +I
Sbjct: 514 KDI 516



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 180/467 (38%), Positives = 256/467 (54%), Gaps = 35/467 (7%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  + +  LP  + KL +L+ELYL  N+L +LP +IGY+  L  L L +N LT+LP+ + 
Sbjct: 112 LDNNQLKTLPKEIGKLQNLQELYLTNNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIG 171

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
            LQ L+ LDL  N+L  LP  + KL +L+ L L  N++KT+  +I YL  L  L +RDN+
Sbjct: 172 KLQNLQKLDLSGNQLKTLPKEIGKLQNLRELDLNDNQLKTLPKEIGYLKELQDLDLRDNQ 231

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           +  LP E+G+L+NL  LDL+ N L+ LPKEIG    L  L L  N+L  +P  +G L  L
Sbjct: 232 LTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLQELYLYGNQLKTLPKEIGYLKEL 291

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L LS N+L ++P+ + +   L        AL  L D  L +L           K   Y
Sbjct: 292 QVLHLSDNKLTTLPKEIGQLQKLQ-------ALLHLGDNQLKTLP----------KDIGY 334

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
                     +  ++   NQ+  +P  I  + + L  + +  N L +LP D+G    L  
Sbjct: 335 -------LKELQLLDLSGNQLKTLPKDI-GQLQKLQDLELDSNQLKTLPKDIGKLQNLQV 386

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           LNL  NQ+  L +DI  L  L VL L NN LK LP  IG L+KL+ L+L  NKL +LP +
Sbjct: 387 LNLSNNQLKTLPKDIGQLQKLRVLELYNNQLKTLPKEIGQLQKLQELNLSHNKLTTLPKD 446

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
           I  L+ LQ L L +NQL +LP+ IG L NL  L++  N L ++P++IG L+NL  LYL +
Sbjct: 447 IEKLQNLQVLNLTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTN 506

Query: 528 NTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
           N  L  +P ++    NLQ + L N  L+ +P E         IRYLK
Sbjct: 507 NQ-LTTLPKDIEKLQNLQELYLTNNQLTTLPKE---------IRYLK 543



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 120/349 (34%), Positives = 204/349 (58%), Gaps = 10/349 (2%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL- 274
           +++  L + +N++  LP ++G+L+NL  L+L +N L  +PKEIG    L  L+L  N+L 
Sbjct: 37  TDVRYLDLNNNQLTTLPKDIGKLQNLQKLNLYNNQLTTIPKEIGYLKELQELNLSRNQLT 96

Query: 275 -VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
            + +P+ +G    L +L L  N+L+++P+ + K  +L E  +    L +LP   +  L  
Sbjct: 97  TLTLPNKIG---QLQKLYLDNNQLKTLPKEIGKLQNLQELYLTNNQLKTLPKE-IGYLKE 152

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ L  N+ T  P+    +  ++  ++   NQ+  +P  I  + +NL ++++ DN L 
Sbjct: 153 LQDLDLRDNQLTTLPN-EIGKLQNLQKLDLSGNQLKTLPKEI-GKLQNLRELDLNDNQLK 210

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP ++G    L +L+L  NQ++ L  +I  L NL+ L LS N LK LP  IG L+ L+ 
Sbjct: 211 TLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLQE 270

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL-SYLSVGENNLQSIPE 512
           L L  N+L++LP EIG+LKELQ L L  N+L +LP+ IG L  L + L +G+N L+++P+
Sbjct: 271 LYLYGNQLKTLPKEIGYLKELQVLHLSDNKLTTLPKEIGQLQKLQALLHLGDNQLKTLPK 330

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +IG L+ L  L L+ N  L  +P ++     LQ + LD+  L  +P +I
Sbjct: 331 DIGYLKELQLLDLSGNQ-LKTLPKDIGQLQKLQDLELDSNQLKTLPKDI 378



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 104/174 (59%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +L+L  + +  LP  + KL +L+ L L  N+L +LP  IG +  L  L L  N L +LP 
Sbjct: 363 DLELDSNQLKTLPKDIGKLQNLQVLNLSNNQLKTLPKDIGQLQKLRVLELYNNQLKTLPK 422

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            +  LQ+L+ L+L HNKL  LP  + KL +L++L L  N++KT+  +I  L NL +L++ 
Sbjct: 423 EIGQLQKLQELNLSHNKLTTLPKDIEKLQNLQVLNLTNNQLKTLPKEIGQLQNLQVLNLS 482

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            NK+  LP ++G+L+NL  L L +N L  LPK+I     L  L L +N+L  +P
Sbjct: 483 HNKLTTLPKDIGKLQNLQELYLTNNQLTTLPKDIEKLQNLQELYLTNNQLTTLP 536



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/146 (43%), Positives = 91/146 (62%), Gaps = 6/146 (4%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L+E +QN  ++  L L+NN L  LP  IG L+ L+ L+L  N+L ++P EIG+LKELQ L
Sbjct: 29  LTEALQNPTDVRYLDLNNNQLTTLPKDIGKLQNLQKLNLYNNQLTTIPKEIGYLKELQEL 88

Query: 478 ILQSNQL--VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
            L  NQL  ++LP  IG L  L YL    N L+++P+EIG L+NL  LYL +N  L  +P
Sbjct: 89  NLSRNQLTTLTLPNKIGQLQKL-YLD--NNQLKTLPKEIGKLQNLQELYLTNNQ-LKTLP 144

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEI 561
            E+     LQ + L +  L+ +P+EI
Sbjct: 145 KEIGYLKELQDLDLRDNQLTTLPNEI 170



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 15/137 (10%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L+L+ + +  LP  + +L +L+ L L  NKL +LP  IG + NL  L L  N 
Sbjct: 449 KLQNLQVLNLTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQ 508

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP  +  LQ L+ L L +N+L  LP  +  L  L++L               +L ++
Sbjct: 509 LTTLPKDIEKLQNLQELYLTNNQLTTLPKEIRYLKGLEVL---------------HLDDI 553

Query: 219 SMLSMRDNKIRELPPEL 235
             L  ++ KIR+L P++
Sbjct: 554 PALRSQEKKIRKLLPKI 570


>gi|421127271|ref|ZP_15587495.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136024|ref|ZP_15596135.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019758|gb|EKO86572.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435361|gb|EKP84493.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 659

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 177/463 (38%), Positives = 271/463 (58%), Gaps = 8/463 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN+  L+L+   +T LP  + +L +L+ L LY N+L +LP +IG + NL  L L  N LT
Sbjct: 117 ENLQRLNLNSQKLTTLPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLT 176

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L++LDL +N+L  LP  + +L +L+ LYL +N++  +  +I  L NL  
Sbjct: 177 TLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTILPKEIGQLENLQR 236

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++   K+  LP E+G+L+NL  LDL+ N L  LPKE+G    L  LDL  N L  +P  
Sbjct: 237 LNLNSQKLTTLPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPME 296

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNIT 338
           +G L NL  L L+ N+L ++P+ + +  +L E ++    L++LP   G L +L ++N I 
Sbjct: 297 IGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIV 356

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
               + T  P     +  ++ ++N    Q+  +P  I    +NL  +N+    LT+LP +
Sbjct: 357 ---TQLTTLPK-EIGELQNLKTLNLIVTQLTTLPKEI-GELQNLKTLNLIVTQLTTLPKE 411

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L  LNL  NQ++ L ++I  L NLE+LVL  N +  LP  IG L+ L+ L L +
Sbjct: 412 IGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLGLHQ 471

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L +LP EIG L+ LQRL L  NQL +LP+ IG L NL  L + EN L ++P+EI  L+
Sbjct: 472 NQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQ 531

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           NL  L L DN  L  +P E+    +LQ+++L +  LS +P EI
Sbjct: 532 NLRVLDL-DNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEI 573



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 178/485 (36%), Positives = 275/485 (56%), Gaps = 27/485 (5%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDLS +S+T LP  + +L +L+EL L  N L +LP ++G + NL  L L    LT
Sbjct: 71  QNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLT 130

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L++L L +N+L  LP  + +L +LK+L+L  N++ T+  +I+ L NL M
Sbjct: 131 TLPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQM 190

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIG----------NCTMLVT---- 266
           L + +N++  LP E+G+L+NL  L L++N L  LPKEIG          N   L T    
Sbjct: 191 LDLGNNQLTILPKEIGQLQNLQELYLSYNQLTILPKEIGQLENLQRLNLNSQKLTTLPKE 250

Query: 267 ---------LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
                    LDL  N L  +P  +G L NL RL L  NRL ++P  + +  +L E ++  
Sbjct: 251 IGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNS 310

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             L++LP   +  L ++  + L RN+ T  P     Q  ++ ++N    Q+  +P  I  
Sbjct: 311 NKLTTLPKE-IRQLRNLQELDLHRNQLTTLPK-EIGQLQNLKTLNLIVTQLTTLPKEI-G 367

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
             +NL  +N+    LT+LP ++G    L  LNL   Q++ L ++I  L NL+ L L +N 
Sbjct: 368 ELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQ 427

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L  LP  IG L+ L+ L L EN++ +LP EIG L+ LQ L L  NQL +LP+ IG L NL
Sbjct: 428 LTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLGLHQNQLTTLPKEIGQLQNL 487

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
             L + +N L ++P+EIG L+NL  L L++N  L  +P E+    NL+++ LDN  L+ +
Sbjct: 488 QRLDLHQNQLTTLPKEIGQLQNLQELCLDENQ-LTTLPKEIEQLQNLRVLDLDNNQLTTL 546

Query: 558 PSEIV 562
           P E++
Sbjct: 547 PKEVL 551



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 162/425 (38%), Positives = 247/425 (58%), Gaps = 3/425 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L LS + +T LP  + +L +L+ L L   KL +LP +IG + NL  L L+ NSLT
Sbjct: 209 QNLQELYLSYNQLTILPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRNLQWLDLSFNSLT 268

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L+ LDL  N+L  LPM + +L +L+ L L  N++ T+  +I+ L NL  
Sbjct: 269 TLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQE 328

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+L+NL TL+L    L  LPKEIG    L TL+L   +L  +P  
Sbjct: 329 LDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKE 388

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L   +L ++P+ + +  +L   N+    L++LP  +   L ++  + L 
Sbjct: 389 IGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI-GELQNLEILVLR 447

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ TA P     Q  ++  +    NQ+  +P  I  + +NL ++++  N LT+LP ++G
Sbjct: 448 ENRITALPKE-IGQLQNLQWLGLHQNQLTTLPKEI-GQLQNLQRLDLHQNQLTTLPKEIG 505

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L EL L  NQ++ L ++I+ L NL VL L NN L  LP  +  L+ L+ L L  N+
Sbjct: 506 QLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNR 565

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L +LP EIG L+ LQ L L SNQL++LP+ IG L NL  L + EN L + P+EI  L+NL
Sbjct: 566 LSTLPKEIGQLQNLQVLGLISNQLMTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNL 625

Query: 521 HTLYL 525
             L+L
Sbjct: 626 QELHL 630



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 171/456 (37%), Positives = 252/456 (55%), Gaps = 6/456 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  + +L +L+ELYL  N+L  LP +IG + NL  L L    LT
Sbjct: 186 KNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTILPKEIGQLENLQRLNLNSQKLT 245

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L+ LDL  N L  LP  V +L +L+ L L  NR+ T+  +I  L NL  
Sbjct: 246 TLPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQE 305

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  NK+  LP E+ +L+NL  LDL  N L  LPKEIG    L TL+L   +L  +P  
Sbjct: 306 LDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKE 365

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L   +L ++P+ + +  +L   N+    L++LP  +   L ++  + L 
Sbjct: 366 IGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEI-GELQNLKTLNLL 424

Query: 341 RNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
            N+ T  P   G  Q   +  +    N+I  +P  I  + +NL  + +  N LT+LP ++
Sbjct: 425 DNQLTTLPKEIGELQNLEILVL--RENRITALPKEI-GQLQNLQWLGLHQNQLTTLPKEI 481

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G    L  L+L  NQ++ L ++I  L NL+ L L  N L  LP  I  L+ L+ LDL+ N
Sbjct: 482 GQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNN 541

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L +LP E+  L+ LQ L L SN+L +LP+ IG L NL  L +  N L ++P+EIG L+N
Sbjct: 542 QLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLMTLPKEIGQLQN 601

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           L  L L++N  L   P E+    NLQ + L   PLS
Sbjct: 602 LQELCLDENQ-LTTFPKEIRQLKNLQELHLYLNPLS 636



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 163/451 (36%), Positives = 249/451 (55%), Gaps = 4/451 (0%)

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
            + T L  +++    +  L L   KL  LP +IG + NL  L L+ NSLT+LP  +  L+
Sbjct: 35  GTYTDLAKTLQNPLKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLR 94

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
            L+ LDL  N L  LP  V +L +L+ L L   ++ T+  +I  L NL +L +  N++  
Sbjct: 95  NLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLKNLQLLILYYNQLTA 154

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+G+LKNL  L L +N L  LP EI     L  LDL +N+L  +P  +G L NL  L
Sbjct: 155 LPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQEL 214

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            LSYN+L  +P+ + +  +L   N+    L++LP   +  L ++  + LS N  T  P  
Sbjct: 215 YLSYNQLTILPKEIGQLENLQRLNLNSQKLTTLPKE-IGQLRNLQWLDLSFNSLTTLPK- 272

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              Q  ++  ++   N++  +P  I  + KNL ++++  N LT+LP ++     L EL+L
Sbjct: 273 EVGQLENLQRLDLHQNRLATLPMEI-GQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDL 331

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             NQ++ L ++I  L NL+ L L    L  LP  IG L+ LK L+L   +L +LP EIG 
Sbjct: 332 HRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGE 391

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L+ L+ L L   QL +LP+ IG L NL  L++ +N L ++P+EIG L+NL  L L +N  
Sbjct: 392 LQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENR- 450

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +  +P E+    NLQ + L    L+ +P EI
Sbjct: 451 ITALPKEIGQLQNLQWLGLHQNQLTTLPKEI 481



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 130/222 (58%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + +T LP  + +L +LE L L  N++ +LP +IG + NL  LGL +N LT
Sbjct: 416 QNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLGLHQNQLT 475

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ L+ LDL  N+L  LP  + +L +L+ L L  N++ T+  +I+ L NL +
Sbjct: 476 TLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRV 535

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++  LP E+  L++L  L L  N L  LPKEIG    L  L L  N+L+ +P  
Sbjct: 536 LDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLMTLPKE 595

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           +G L NL  L L  N+L + P+ + +  +L E ++    LSS
Sbjct: 596 IGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 637


>gi|255070553|ref|XP_002507358.1| predicted protein [Micromonas sp. RCC299]
 gi|226522633|gb|ACO68616.1| predicted protein [Micromonas sp. RCC299]
          Length = 574

 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 175/480 (36%), Positives = 273/480 (56%), Gaps = 25/480 (5%)

Query: 104 LNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLP 163
           L L L  + +T +P  + +LT LE L LY N+L S+P++IG +T+LT L L  N LTS+P
Sbjct: 9   LELALDGNELTSVPAEIGQLTSLEVLDLYNNQLTSVPAEIGQLTSLTELYLFGNQLTSVP 68

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
             +  L  L  LDL  N+L  +P  V +LTSL+ L+L  NR+ +V  +I  L++L  L +
Sbjct: 69  AEIGQLTSLTGLDLSGNQLTSVPAEVGQLTSLRELHLWNNRLTSVPAEIGQLTSLEELCL 128

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
            DN++  +P E+G+L +L  L L  N L  +P EIG  T L  L+L+ N+L ++P  +G 
Sbjct: 129 DDNRLTSVPAEIGQLTSLERLYLGGNQLTSVPAEIGRLTSLEELNLKSNQLTSVPAEIGQ 188

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L +L +L L+ N+L SVP  + +   L E ++ G  L+S+P   +  LT +  + L  N+
Sbjct: 189 LASLEKLNLNGNQLTSVPAEIGQLTSLKELDLNGNQLTSVPAD-IGQLTDLKELGLRDNQ 247

Query: 344 FTAYPS-------------GG------PT---QFTSVYSINFEHNQIDKIPYGIFSRAKN 381
            T+ P+             GG      P    Q TS+  +  + NQ+  +P  I+ +  +
Sbjct: 248 LTSVPAEIGQLASLEKLYVGGNQLTSVPAEIGQLTSLEGLELDDNQLTSVPAEIW-QLTS 306

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           L  + + DN LTS+P ++G    LTEL L  NQ++ +  +I  L  L+ L L +N L  +
Sbjct: 307 LRVLYLDDNQLTSVPAEIGQLTSLTELYLSGNQLTSVPAEIGRLTELKELGLRDNQLTSV 366

Query: 442 PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLS 501
           P  I  L  L+ L L++N L+ LP EIG L  L+ L L+ N+L S+P  I  LT+L+ L 
Sbjct: 367 PEEIWQLTSLRVLYLDDNLLDELPAEIGQLTSLEELGLERNELTSVPAEIWQLTSLTELY 426

Query: 502 VGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +G N L S+P EIG L +L  LYL+  T L ++P E+   ++L+++ L    L+ +P+EI
Sbjct: 427 LGCNQLTSVPAEIGQLTSLTKLYLS-GTKLTSVPAEIGQLTSLRVLYLYGNQLTSLPAEI 485



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 168/449 (37%), Positives = 262/449 (58%), Gaps = 4/449 (0%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           +T +P  + +LT L  L L GN+L S+P+++G +T+L  L L  N LTS+P  +  L  L
Sbjct: 64  LTSVPAEIGQLTSLTGLDLSGNQLTSVPAEVGQLTSLRELHLWNNRLTSVPAEIGQLTSL 123

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
             L L  N+L  +P  + +LTSL+ LYL  N++ +V  +I  L++L  L+++ N++  +P
Sbjct: 124 EELCLDDNRLTSVPAEIGQLTSLERLYLGGNQLTSVPAEIGRLTSLEELNLKSNQLTSVP 183

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            E+G+L +L  L+L  N L  +P EIG  T L  LDL  N+L ++P  +G L +L  L L
Sbjct: 184 AEIGQLASLEKLNLNGNQLTSVPAEIGQLTSLKELDLNGNQLTSVPADIGQLTDLKELGL 243

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
             N+L SVP  + +   L +  V G  L+S+P   +  LTS+  + L  N+ T+ P+   
Sbjct: 244 RDNQLTSVPAEIGQLASLEKLYVGGNQLTSVP-AEIGQLTSLEGLELDDNQLTSVPA-EI 301

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
            Q TS+  +  + NQ+  +P  I  +  +L+++ +  N LTS+P ++G    L EL L  
Sbjct: 302 WQLTSLRVLYLDDNQLTSVPAEI-GQLTSLTELYLSGNQLTSVPAEIGRLTELKELGLRD 360

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           NQ++ + E+I  L +L VL L +NLL +LP+ IG L  L+ L LE N+L S+P EI  L 
Sbjct: 361 NQLTSVPEEIWQLTSLRVLYLDDNLLDELPAEIGQLTSLEELGLERNELTSVPAEIWQLT 420

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            L  L L  NQL S+P  IG LT+L+ L +    L S+P EIG L +L  LYL  N  L 
Sbjct: 421 SLTELYLGCNQLTSVPAEIGQLTSLTKLYLSGTKLTSVPAEIGQLTSLRVLYLYGNQ-LT 479

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           ++P E+   ++L+ + L+   L+ +P+EI
Sbjct: 480 SLPAEIGQLASLRELYLNGKQLTSVPAEI 508



 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 163/428 (38%), Positives = 245/428 (57%), Gaps = 4/428 (0%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  + +T +P  + +LT LE LYL GN+L S+P++IG +T+L  L L  N LTS+P  + 
Sbjct: 128 LDDNRLTSVPAEIGQLTSLERLYLGGNQLTSVPAEIGRLTSLEELNLKSNQLTSVPAEIG 187

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
            L  L  L+L  N+L  +P  + +LTSLK L L  N++ +V  DI  L++L  L +RDN+
Sbjct: 188 QLASLEKLNLNGNQLTSVPAEIGQLTSLKELDLNGNQLTSVPADIGQLTDLKELGLRDNQ 247

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           +  +P E+G+L +L  L +  N L  +P EIG  T L  L+L  N+L ++P  +  L +L
Sbjct: 248 LTSVPAEIGQLASLEKLYVGGNQLTSVPAEIGQLTSLEGLELDDNQLTSVPAEIWQLTSL 307

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L L  N+L SVP  + +   L E  + G  L+S+P   +  LT +  + L  N+ T+ 
Sbjct: 308 RVLYLDDNQLTSVPAEIGQLTSLTELYLSGNQLTSVP-AEIGRLTELKELGLRDNQLTSV 366

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
           P     Q TS+  +  + N +D++P  I  +  +L ++ ++ N LTS+P ++     LTE
Sbjct: 367 PEE-IWQLTSLRVLYLDDNLLDELPAEI-GQLTSLEELGLERNELTSVPAEIWQLTSLTE 424

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           L LG NQ++ +  +I  L +L  L LS   L  +P+ IG L  L+ L L  N+L SLP E
Sbjct: 425 LYLGCNQLTSVPAEIGQLTSLTKLYLSGTKLTSVPAEIGQLTSLRVLYLYGNQLTSLPAE 484

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
           IG L  L+ L L   QL S+P  IG LT L  L + +N L S+PEEI  L +L  LYL+D
Sbjct: 485 IGQLASLRELYLNGKQLTSVPAEIGQLTELKELDLRDNKLTSVPEEIWQLTSLRVLYLDD 544

Query: 528 NTCLNNIP 535
           N  L ++P
Sbjct: 545 NQ-LTSVP 551



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/348 (35%), Positives = 190/348 (54%), Gaps = 26/348 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L  + +T +P  + +L  LE+LY+ GN+L S+P++IG +T+L  L L +N LTS+P  
Sbjct: 241 LGLRDNQLTSVPAEIGQLASLEKLYVGGNQLTSVPAEIGQLTSLEGLELDDNQLTSVPAE 300

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  LRVL L  N+L  +P  + +LTSL  LYL  N++ +V  +I  L+ L  L +RD
Sbjct: 301 IWQLTSLRVLYLDDNQLTSVPAEIGQLTSLTELYLSGNQLTSVPAEIGRLTELKELGLRD 360

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  +P E+ +L +L  L L  N L+ELP EIG  T L  L L+ NEL ++P  +  L 
Sbjct: 361 NQLTSVPEEIWQLTSLRVLYLDDNLLDELPAEIGQLTSLEELGLERNELTSVPAEIWQLT 420

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +LT L L  N+L SVP  + +                        LTS+  + LS  K T
Sbjct: 421 SLTELYLGCNQLTSVPAEIGQ------------------------LTSLTKLYLSGTKLT 456

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P+    Q TS+  +    NQ+  +P  I   A +L ++ +    LTS+P ++G    L
Sbjct: 457 SVPAE-IGQLTSLRVLYLYGNQLTSLPAEIGQLA-SLRELYLNGKQLTSVPAEIGQLTEL 514

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            EL+L  N+++ + E+I  L +L VL L +N L  +P++I  L+   C
Sbjct: 515 KELDLRDNKLTSVPEEIWQLTSLRVLYLDDNQLTSVPAAIRELKAAGC 562


>gi|456825507|gb|EMF73903.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 588

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 177/461 (38%), Positives = 264/461 (57%), Gaps = 4/461 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L+LS  + T LP  +EKL +L+ L L  N+LA+LP +IG + NL  L L +N LT 
Sbjct: 51  NVRVLNLSGQNFTTLPKEIEKLKNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTV 110

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  LQ L+ L+L+ N+L  LP+ + +L +L+ L L  N++ T   +I  L NL  L
Sbjct: 111 LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQEL 170

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           +++ N++  LP E+G+LKNL  L+L+ N L   PKEIG    L  L L  N+L   P  +
Sbjct: 171 NLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEI 230

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L L YN+ ++V + + +  +L + N+    L++LP   +  L  + +++L R
Sbjct: 231 GQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLP-AEIGQLKKLQDLSLGR 289

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P     Q  ++Y+++   NQ+  +P  I  + KNL  + +  N LT+ P ++G 
Sbjct: 290 NQLTTLPK-EIGQLKNLYNLDLGTNQLTTLPKEI-GQLKNLYNLGLGRNQLTTFPKEIGQ 347

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L EL+L  N+++ L ++I  L NLE L LS N L   P  IG L+KL+ L L  N+L
Sbjct: 348 LENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRL 407

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
             LP EIG LK LQ L L  N+L +LP+ IG L NL  L + EN L ++P+EIG L+NL 
Sbjct: 408 VILPKEIGQLKNLQTLSLSYNRLTTLPKEIGQLKNLENLELSENRLATLPKEIGQLQNLQ 467

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
            L L+ N      P E+    NL  + L N  L+ +P EI 
Sbjct: 468 KLDLDTNR-FATFPKEIGQLQNLYNLDLGNNQLTALPKEIA 507



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 165/461 (35%), Positives = 267/461 (57%), Gaps = 4/461 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L K+ +T LP  + +L +L+ L L  N+LA+LP +IG + NL  LGL+EN LT
Sbjct: 96  QNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLT 155

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           + P  +  L+ L+ L+L+ N+L  LP  + +L +L+ L L  N++ T   +I  L  L  
Sbjct: 156 TFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQD 215

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++   P E+G+LKNL  LDL +N  + + KEIG    L+ L+L +N+L  +P  
Sbjct: 216 LGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAE 275

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L  L  L L  N+L ++P+ + +  +L   ++    L++LP   +  L ++ N+ L 
Sbjct: 276 IGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKE-IGQLKNLYNLGLG 334

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN+ T +P     Q  ++  ++  +N++  +P  I  + KNL  + + +N LT+ P ++G
Sbjct: 335 RNQLTTFPK-EIGQLENLQELDLWNNRLTALPKEI-GQLKNLENLELSENQLTTFPKEIG 392

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L +L L  N++  L ++I  L NL+ L LS N L  LP  IG L+ L+ L+L EN+
Sbjct: 393 QLKKLQDLGLSYNRLVILPKEIGQLKNLQTLSLSYNRLTTLPKEIGQLKNLENLELSENR 452

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L +LP EIG L+ LQ+L L +N+  + P+ IG L NL  L +G N L ++P+EI  L+NL
Sbjct: 453 LATLPKEIGQLQNLQKLDLDTNRFATFPKEIGQLQNLYNLDLGNNQLTALPKEIAQLKNL 512

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           + L LN N  L  +P E+    NL  + L    L+ +P EI
Sbjct: 513 YDLDLNTNQ-LTTLPKEIGQLKNLYNLGLGTNQLTTLPKEI 552



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 154/415 (37%), Positives = 236/415 (56%), Gaps = 3/415 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L LS++ +T  P  + +L +L+EL L  N+L +LP +IG + NL  L L+EN LT
Sbjct: 142 QNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLT 201

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           + P  +  L++L+ L L  N+L   P  + +L +L++L L +N+ KTV  +I  L NL  
Sbjct: 202 TFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQ 261

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  N++  LP E+G+LK L  L L  N L  LPKEIG    L  LDL  N+L  +P  
Sbjct: 262 LNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKE 321

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L + P+ + +  +L E ++    L++LP   +  L ++ N+ LS
Sbjct: 322 IGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKE-IGQLKNLENLELS 380

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T +P     Q   +  +   +N++  +P  I  + KNL  +++  N LT+LP ++G
Sbjct: 381 ENQLTTFPK-EIGQLKKLQDLGLSYNRLVILPKEI-GQLKNLQTLSLSYNRLTTLPKEIG 438

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L L  N+++ L ++I  L NL+ L L  N     P  IG L+ L  LDL  N+
Sbjct: 439 QLKNLENLELSENRLATLPKEIGQLQNLQKLDLDTNRFATFPKEIGQLQNLYNLDLGNNQ 498

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L +LP EI  LK L  L L +NQL +LP+ IG L NL  L +G N L ++P+EIG
Sbjct: 499 LTALPKEIAQLKNLYDLDLNTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 553


>gi|456875032|gb|EMF90266.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 664

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 183/480 (38%), Positives = 276/480 (57%), Gaps = 21/480 (4%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L+L+++ + +LP  + KL +L+EL+L  N+LA+LP +IG + NL  L L  N 
Sbjct: 189 KLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTRNRLANLPEEIGKLQNLQILNLGVNQ 248

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP  + NLQ+L+ L L  N+   LP  + KL  L+ L L  N++ T+  +I+ L  L
Sbjct: 249 LTTLPKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKL 308

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L +  N++  LP E+ +L+NL  L L +N L  LPKEIG    L  L L++N+L  +P
Sbjct: 309 QQLYLYSNRLANLPEEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLP 368

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L NL  L LS N+L ++P+ + K  HL E ++E   L++LP   +  L ++  + 
Sbjct: 369 KEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKE-IGKLQNLQELR 427

Query: 339 LSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           L  N+ T  P       +   +YS     NQ   +P  I++  +NL  +N+  N LTSLP
Sbjct: 428 LDYNRLTTLPEEIEKLQKLKKLYS---SGNQFTTVPEEIWN-LQNLQALNLYSNQLTSLP 483

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  L L  NQ++ L ++I  L NL++L LS+N L  LP  IG L+ L+ L L
Sbjct: 484 KEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYL 543

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
            +N+L +LP EIG L+ LQ L L  N+L +LP+ IG+L NL  L++  N L ++PEEIG 
Sbjct: 544 RDNQLTTLPKEIGNLQNLQVLNLNHNRLTTLPKEIGNLQNLQVLNLNHNRLTTLPEEIGK 603

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
           L+NL  L+L DN  L  +P E+    NL+ + L             VG PSLI +  K+Q
Sbjct: 604 LQNLQLLHL-DNNQLTTLPEEIGKLQNLKELDL-------------VGNPSLIGQKEKIQ 649


>gi|418744883|ref|ZP_13301228.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794214|gb|EKR92124.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 559

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 177/457 (38%), Positives = 267/457 (58%), Gaps = 4/457 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS + +T LP  + +L +LEEL L+ N+L + P++I  +  L  L LA+N L +LP  
Sbjct: 66  LNLSNNRLTTLPNEIGRLQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKE 125

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L+ L L++N L  LP  + +L  LK LYL  N + T+  +I  L NL  L + D
Sbjct: 126 IGTLQKLQHLYLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLED 185

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L+NL  LD+++NHL  LP EIG    L  L+L +N L+ +P+ +G L 
Sbjct: 186 NQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQ 245

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L LS N+L ++P+ + +   L   ++E   L +LP   + +L  +  + L  N   
Sbjct: 246 NLEELNLSNNQLRTLPQEIGQLQELEWLHLEHNQLITLPQE-IGTLQKLEYLYLKNNHLE 304

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P+    +  S+  ++ EHNQ+  +P  I +     +     + L T LP ++G    L
Sbjct: 305 TLPN-EIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQLAT-LPNEIGQLENL 362

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             LNL  NQ+  L  +I  L NL+ L L NN LK LP+ IG L  L+ L+LE N+L++LP
Sbjct: 363 QYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLP 422

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
           NEIG L+ LQ L L++NQL +LP  IG L NL YL++  N L+++P EIG LENL  L L
Sbjct: 423 NEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGRLENLQYLNL 482

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
            +N  L  +P E+    NL++++L    L  +P EIV
Sbjct: 483 -ENNQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQEIV 518



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 178/458 (38%), Positives = 266/458 (58%), Gaps = 8/458 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS + +  LP  + KL  LE L L  N+L +LP++IG + NL  L L  N LT+ P+ 
Sbjct: 43  LDLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDLFHNRLTTFPNE 102

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L+ L L  N+L  LP  +  L  L+ LYL+ N + T+  +I  L  L  L + +
Sbjct: 103 IVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLATLPSEIGRLQRLKRLYLYN 162

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N +  LP E+G+L+NL  L L  N L  LP+EIG    L  LD+ +N L  +P+ +G L 
Sbjct: 163 NHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLR 222

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L RL LS N L ++P  + K  +L E N+    L +LP   +  L  +  + L  N+  
Sbjct: 223 SLKRLNLSNNLLITLPNEIGKLQNLEELNLSNNQLRTLPQE-IGQLQELEWLHLEHNQLI 281

Query: 346 AYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
             P   G   +   +Y    ++N ++ +P  I  + ++L +++++ N L +LP ++GT  
Sbjct: 282 TLPQEIGTLQKLEYLY---LKNNHLETLPNEI-GKLRSLKRLHLEHNQLITLPQEIGTLQ 337

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            L  LNL  NQ++ L  +I  L NL+ L L NN LK LP+ IG L  L+ L+LE N+L++
Sbjct: 338 NLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKT 397

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           LPNEIG L+ LQ L L++NQL +LP  IG L NL YL++  N L+++P EIG LENL  L
Sbjct: 398 LPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYL 457

Query: 524 YLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L +N  L  +P E+    NLQ ++L+N  L  +P+EI
Sbjct: 458 NL-ENNQLKTLPNEIGRLENLQYLNLENNQLKTLPNEI 494



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 160/422 (37%), Positives = 242/422 (57%), Gaps = 26/422 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L  + +  LP  + +L  L+ LYLY N L +LP +IG + NL  L L +N LT+LP  
Sbjct: 135 LYLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQE 194

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ LD+ +N L  LP  + KL SLK L L  N + T+  +I  L NL  L++ +
Sbjct: 195 IGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQNLEELNLSN 254

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++R LP E+G+L+ L  L L HN L  LP+EIG    L  L L++N L  +P+ +G L 
Sbjct: 255 NQLRTLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKLR 314

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L RL L +N+L ++P+ +    +L   N+    L++LP+ +                  
Sbjct: 315 SLKRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQLATLPNEI------------------ 356

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                   Q  ++  +N E+NQ+  +P  I  + +NL  +N+++N L +LP ++G    L
Sbjct: 357 -------GQLENLQYLNLENNQLKTLPNEI-GQLENLQYLNLENNQLKTLPNEIGQLENL 408

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             LNL  NQ+  L  +I  L NL+ L L NN LK LP+ IG L  L+ L+LE N+L++LP
Sbjct: 409 QYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLP 468

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
           NEIG L+ LQ L L++NQL +LP  IG L NL  L++G N L ++P+EI  L++L  L L
Sbjct: 469 NEIGRLENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQEIVGLKHLQILKL 528

Query: 526 ND 527
            +
Sbjct: 529 KN 530



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 154/421 (36%), Positives = 229/421 (54%), Gaps = 27/421 (6%)

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           ++L N   +R+LDL  N+L  LP  + KL  L+ L L  NR+ T+  +I  L NL  L +
Sbjct: 32  EALKNPMDVRILDLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDL 91

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
             N++   P E+  L+ L  L LA N L  LPKEIG    L  L L++N L  +P  +G 
Sbjct: 92  FHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLATLPSEIGR 151

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L  L RL L  N L ++P+ + K  +L +  +E   L++LP   +  L ++ ++ +S N 
Sbjct: 152 LQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQE-IGQLENLQDLDVSNNH 210

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
            T  P+    +  S+  +N  +N +  +P  I  + +NL ++N+ +N L +LP ++G   
Sbjct: 211 LTTLPN-EIGKLRSLKRLNLSNNLLITLPNEI-GKLQNLEELNLSNNQLRTLPQEIGQLQ 268

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL-- 461
            L  L+L  NQ+  L ++I  L  LE L L NN L+ LP+ IG LR LK L LE N+L  
Sbjct: 269 ELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLIT 328

Query: 462 ---------------------ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
                                 +LPNEIG L+ LQ L L++NQL +LP  IG L NL YL
Sbjct: 329 LPQEIGTLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYL 388

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
           ++  N L+++P EIG LENL  L L +N  L  +P E+    NLQ ++L+N  L  +P+E
Sbjct: 389 NLENNQLKTLPNEIGQLENLQYLNL-ENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNE 447

Query: 561 I 561
           I
Sbjct: 448 I 448



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 133/383 (34%), Positives = 214/383 (55%), Gaps = 26/383 (6%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L L  + +T LP  + +L +L++L +  N L +LP++IG + +L  L L+ N 
Sbjct: 174 KLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNL 233

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L +LP+ +  LQ L  L+L +N+L  LP  + +L  L+ L+L  N++ T+  +I  L  L
Sbjct: 234 LITLPNEIGKLQNLEELNLSNNQLRTLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKL 293

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L +++N +  LP E+G+L++L  L L HN L  LP+EIG    L  L+L +N+L  +P
Sbjct: 294 EYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQLATLP 353

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           + +G L NL  L L  N+L+++P  + +  +L   N+E   L +LP+ +           
Sbjct: 354 NEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEI----------- 402

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
                          Q  ++  +N E+NQ+  +P  I  + +NL  +N+++N L +LP +
Sbjct: 403 --------------GQLENLQYLNLENNQLKTLPNEI-GQLENLQYLNLENNQLKTLPNE 447

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L  LNL  NQ+  L  +I  L NL+ L L NN LK LP+ IG L+ LK L+L  
Sbjct: 448 IGQLENLQYLNLENNQLKTLPNEIGRLENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGG 507

Query: 459 NKLESLPNEIGFLKELQRLILQS 481
           N+L +LP EI  LK LQ L L++
Sbjct: 508 NQLVTLPQEIVGLKHLQILKLKN 530



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 89/144 (61%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
            +E ++N +++ +L LS+N L  LP+ IG LRKL+ L+L  N+L +LPNEIG L+ L+ L
Sbjct: 30  FNEALKNPMDVRILDLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEEL 89

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L  N+L + P  I  L  L +L + +N L ++P+EIGTL+ L  LYL +N  L  +P E
Sbjct: 90  DLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNN-HLATLPSE 148

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +     L+ + L N  L  +P EI
Sbjct: 149 IGRLQRLKRLYLYNNHLMTLPKEI 172



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 1/128 (0%)

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
            N + +    ++ N   ++ LDL +N+L +LPNEIG L++L+ L L +N+L +LP  IG 
Sbjct: 23  DNKVYRDFNEALKNPMDVRILDLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGR 82

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L NL  L +  N L + P EI  L+ L  LYL DN  +  +P E+     LQ + L N  
Sbjct: 83  LQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLV-TLPKEIGTLQKLQHLYLKNNH 141

Query: 554 LSQIPSEI 561
           L+ +PSEI
Sbjct: 142 LATLPSEI 149


>gi|255080388|ref|XP_002503774.1| predicted protein [Micromonas sp. RCC299]
 gi|226519041|gb|ACO65032.1| predicted protein [Micromonas sp. RCC299]
          Length = 683

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 168/460 (36%), Positives = 262/460 (56%), Gaps = 4/460 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           +++ L L+K+ +T LP  + +LT L EL L  N+L S+P++IG +T+LT L L  N LTS
Sbjct: 208 SMVKLSLTKNQLTSLPAEIGQLTSLRELALDNNRLTSVPAEIGQLTSLTELNLNGNQLTS 267

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  +  L  L  L L  N+L  +P  + +LTSL+ L+L  N++ +V  +I  L++L  L
Sbjct: 268 VPAEVVQLTSLDTLRLGGNQLTSVPADIGQLTSLRRLFLYGNQLTSVPAEIAQLTSLREL 327

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
              ++++  +P E+G+L +L   DL  N L  +P EIG  T L  L L  N L ++P  +
Sbjct: 328 GFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEI 387

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L +L +L L  N+L S+P  + +   L E  ++G  L+S+P   +  LTS+  + LS 
Sbjct: 388 GQLASLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVP-AEIGQLTSLEKLDLSD 446

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T+ P+    Q TS+  +    NQ+  +P  I ++  +L ++   ++ LTS+P ++G 
Sbjct: 447 NQLTSVPT-EIGQLTSLTELYLNGNQLTSVPAEI-AQLTSLRELGFYNSQLTSVPAEIGQ 504

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L + +LG N+++ +  +I  L  L  L L  N L  LP+ IG L  LK L L  N+L
Sbjct: 505 LTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQL 564

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            SLP +IG L  L  L L  N+L S+P  IG LT+L  L + +N L S+P EIG L +L 
Sbjct: 565 TSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLT 624

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            LYLN N  L ++P E+A  S L+ + L    L  +P+ I
Sbjct: 625 ELYLNGNQ-LTSVPTEIAQLSLLEQLWLSGNRLKSVPAAI 663



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 175/512 (34%), Positives = 277/512 (54%), Gaps = 15/512 (2%)

Query: 52  KDNKKCGVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKS 111
           +D+   GV   +T     PE  +  P  ++ E  +    +  E  R  +  + + DL+ +
Sbjct: 144 EDDGDAGV--LRTWRTMSPELQETWPEDQQPEYWEG---VTMENSRVVKLELEDFDLTGA 198

Query: 112 SITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQ 171
               +P  + +LT + +L L  N+L SLP++IG +T+L  L L  N LTS+P  +  L  
Sbjct: 199 ----VPAEIGQLTSMVKLSLTKNQLTSLPAEIGQLTSLRELALDNNRLTSVPAEIGQLTS 254

Query: 172 LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
           L  L+L  N+L  +P  V +LTSL  L L  N++ +V  DI  L++L  L +  N++  +
Sbjct: 255 LTELNLNGNQLTSVPAEVVQLTSLDTLRLGGNQLTSVPADIGQLTSLRRLFLYGNQLTSV 314

Query: 232 PPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLR 291
           P E+ +L +L  L   ++ L  +P EIG  T L   DL  NEL ++P  +G L  L  LR
Sbjct: 315 PAEIAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELR 374

Query: 292 LSYNRLESVPETLSKCVHLNEFNVEGC-ALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
           L  NRL S+P  + +   L +  + GC  L+SLP   +  LTS+  + L  N+ T+ P+ 
Sbjct: 375 LDGNRLTSLPAEIGQLASLKKL-LLGCNQLTSLPAD-IGQLTSLWELRLDGNRLTSVPA- 431

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              Q TS+  ++   NQ+  +P  I  +  +L+++ +  N LTS+P ++     L EL  
Sbjct: 432 EIGQLTSLEKLDLSDNQLTSVPTEI-GQLTSLTELYLNGNQLTSVPAEIAQLTSLRELGF 490

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             +Q++ +  +I  L +LE   L  N L  +P+ IG L  L+ L L+ N+L SLP EIG 
Sbjct: 491 YNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQ 550

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L++L+L  NQL SLP  IG LT+L  L +  N L S+P EIG L +L  L L+DN  
Sbjct: 551 LASLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQ- 609

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           L ++P E+   ++L  + L+   L+ +P+EI 
Sbjct: 610 LTSVPTEIGQLTSLTELYLNGNQLTSVPTEIA 641



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 124/343 (36%), Positives = 193/343 (56%), Gaps = 3/343 (0%)

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
           S +T +P  + +LT LE+  L  N+LAS+P++IG +T L  L L  N LTSLP  +  L 
Sbjct: 332 SQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLA 391

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
            L+ L L  N+L  LP  + +LTSL  L L  NR+ +V  +I  L++L  L + DN++  
Sbjct: 392 SLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTS 451

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           +P E+G+L +L  L L  N L  +P EI   T L  L   +++L ++P  +G L +L + 
Sbjct: 452 VPTEIGQLTSLTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKW 511

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L  N L SVP  + +   L E  ++G  L+SLP   +  L S+  + L  N+ T+ P+ 
Sbjct: 512 DLGKNELASVPAEIGQLTALRELRLDGNRLTSLP-AEIGQLASLKKLLLGCNQLTSLPAD 570

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              Q TS++ +  + N++  +P  I  +  +L K+++ DN LTS+P ++G    LTEL L
Sbjct: 571 -IGQLTSLWELRLDGNRLTSVPAEI-GQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYL 628

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
             NQ++ +  +I  L  LE L LS N LK +P++I  LR   C
Sbjct: 629 NGNQLTSVPTEIAQLSLLEQLWLSGNRLKSVPAAIRELRAAGC 671



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/412 (31%), Positives = 208/412 (50%), Gaps = 47/412 (11%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
            L L  + +T +P  + +LT L  L+LYGN+L S+P++I  +T+L  LG   + LTS+P 
Sbjct: 280 TLRLGGNQLTSVPADIGQLTSLRRLFLYGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPA 339

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            +  L  L   DL  N+L  +P  + +LT+L+ L L  NR+ ++  +I  L++L  L + 
Sbjct: 340 EIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLG 399

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
            N++  LP ++G+L +L  L L  N L  +P EIG  T L  LDL  N+L ++P  +G L
Sbjct: 400 CNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQL 459

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
            +LT L L+ N+L SVP  +++   L E       L+S+P   +  LTS+    L +N+ 
Sbjct: 460 TSLTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQLTSVP-AEIGQLTSLEKWDLGKNEL 518

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK----------------------NL 382
            + P+    Q T++  +  + N++  +P  I   A                       +L
Sbjct: 519 ASVPAE-IGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQLTSL 577

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
            ++ +  N LTS+P ++G                        L +LE L LS+N L  +P
Sbjct: 578 WELRLDGNRLTSVPAEIG-----------------------QLTSLEKLDLSDNQLTSVP 614

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
           + IG L  L  L L  N+L S+P EI  L  L++L L  N+L S+P AI  L
Sbjct: 615 TEIGQLTSLTELYLNGNQLTSVPTEIAQLSLLEQLWLSGNRLKSVPAAIREL 666



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/210 (36%), Positives = 107/210 (50%), Gaps = 29/210 (13%)

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
           S +T +P  + +LT LE+  L  N+LAS+P++IG +T L  L L  N LTSLP  +  L 
Sbjct: 493 SQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLA 552

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
            L+ L L  N+L  LP  + +LTSL  L L  NR+ +V                      
Sbjct: 553 SLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSV---------------------- 590

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
            P E+G+L +L  LDL+ N L  +P EIG  T L  L L  N+L ++P  +  L  L +L
Sbjct: 591 -PAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLTSVPTEIAQLSLLEQL 649

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
            LS NRL+SVP        + E    GC +
Sbjct: 650 WLSGNRLKSVP------AAIRELRAAGCTV 673



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 82/145 (56%), Gaps = 1/145 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L  + +T LP  + +L  L++L L  N+L SLP+ IG +T+L  L L  N LTS+P  
Sbjct: 534 LRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAE 593

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L  LDL  N+L  +P  + +LTSL  LYL  N++ +V  +I  LS L  L +  
Sbjct: 594 IGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLTSVPTEIAQLSLLEQLWLSG 653

Query: 226 NKIRELPPELGELKNL-VTLDLAHN 249
           N+++ +P  + EL+    T+DL   
Sbjct: 654 NRLKSVPAAIRELRAAGCTVDLGRG 678


>gi|427738478|ref|YP_007058022.1| hypothetical protein Riv7116_5077 [Rivularia sp. PCC 7116]
 gi|427373519|gb|AFY57475.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 982

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 187/479 (39%), Positives = 270/479 (56%), Gaps = 9/479 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E +  LDLS + +T LPP + +LT+L+ LYL  N+L+SLP++IG +TNL  L L  N L+
Sbjct: 407 EEVTELDLSANKLTALPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLS 466

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP  +  L  L+ L L +N+L+ LP  + +LT+L+ LYL  N++ ++  +I  L+NL  
Sbjct: 467 SLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQS 526

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
             + +  +  LP E+G+L NL +  L +  L  LP EIG  T L +  L +  L ++P  
Sbjct: 527 FYLYNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPAN 586

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L LS N+L  +   + +  +L    +    LSSLP   +  LT++  + L 
Sbjct: 587 IFQLTNLQSLYLSSNQLSILQAEIGQLTNLQSLYLFNNKLSSLP-AEIGQLTNLQTLYLF 645

Query: 341 RNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
            NK ++ P+  G  T   ++Y  N   N++  +P  I  +  NL  + + +N L+SLP +
Sbjct: 646 NNKLSSLPAEIGQLTNLQTLYLFN---NKLSSLPAEI-GQLTNLQTLYLFNNKLSSLPAE 701

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L  L L  NQ+S L  +I  L NL+ L L NN L  LP+ IG L  L+ L L  
Sbjct: 702 IGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSLYLFN 761

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L SLP EIG L  LQ L L +NQL SLP  IG LTNL  L +  N L S+P  IG L 
Sbjct: 762 NQLSSLPAEIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLDNNQLSSLPPGIGQLT 821

Query: 519 NLHTLYLNDNTCLNNIPFELA-LCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
           NL TLYL DN  LN++P E+  L S+L+ + LD  PL  +P EI       I+ + K Q
Sbjct: 822 NLQTLYL-DNNQLNSLPTEIGRLNSSLKNLLLDGNPLKSLPPEIQYQNSKAILNFYKQQ 879



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 146/406 (35%), Positives = 220/406 (54%), Gaps = 11/406 (2%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +L L  + ++ LP  + +LT+L+  YLY   L+SLP++IG +TNL    L    L+S
Sbjct: 500 NLQSLYLFNNKLSSLPAEIGQLTNLQSFYLYNTLLSSLPAEIGQLTNLQSFYLDNTLLSS 559

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L  L+   L +  L+ LP  +++LT+L+ LYL  N++  +  +I  L+NL  L
Sbjct: 560 LPAEIGQLTNLQSFYLDNTLLSSLPANIFQLTNLQSLYLSSNQLSILQAEIGQLTNLQSL 619

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + +NK+  LP E+G+L NL TL L +N L  LP EIG  T L TL L +N+L ++P  +
Sbjct: 620 YLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEI 679

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L L  N+L S+P  + +  +L    ++   LSSLP   +  LT++ ++ L  
Sbjct: 680 GQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLDNNQLSSLP-AEIGQLTNLQSLYLFN 738

Query: 342 NKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           NK ++ P+  G  T   S+Y  N   NQ+  +P  I  +  NL  + + +N L+SLP ++
Sbjct: 739 NKLSSLPAEIGQLTNLQSLYLFN---NQLSSLPAEI-GQLTNLQSLYLDNNQLSSLPAEI 794

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE- 458
           G    L  L L  NQ+S L   I  L NL+ L L NN L  LP+ IG L       L + 
Sbjct: 795 GQLTNLQSLYLDNNQLSSLPPGIGQLTNLQTLYLDNNQLNSLPTEIGRLNSSLKNLLLDG 854

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
           N L+SLP EI +      L     Q   L + I +L    +L +GE
Sbjct: 855 NPLKSLPPEIQYQNSKAILNFYKQQ---LEQTIDNLYEAKFLIIGE 897


>gi|170577657|ref|XP_001894091.1| ras-binding protein SUR-8 [Brugia malayi]
 gi|158599486|gb|EDP37071.1| ras-binding protein SUR-8, putative [Brugia malayi]
          Length = 186

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 122/184 (66%), Positives = 156/184 (84%)

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G W+ +TELNL TNQ+  L +D+  LVNLEVLVLSNN+LKKLPS IG+L+KL+ LDLEE
Sbjct: 1   MGCWLAMTELNLSTNQLRVLPDDVDKLVNLEVLVLSNNMLKKLPSQIGSLKKLRELDLEE 60

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L+++PNEIGF+  L +L +QSN+LV LPR IG+LTNL+ L  GENNL S+PEEIG L+
Sbjct: 61  NELDTIPNEIGFVSSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENNLTSLPEEIGNLD 120

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGP 578
           +L +LY+NDN  L+N+PFELALC++L+IMS++NCPLSQIP EI  GGPSL+I+YLKMQGP
Sbjct: 121 SLKSLYINDNPSLHNLPFELALCASLEIMSIENCPLSQIPPEITAGGPSLVIQYLKMQGP 180

Query: 579 YRTM 582
           YR M
Sbjct: 181 YRVM 184



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 77/151 (50%), Gaps = 24/151 (15%)

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L L  N+++ +  D+  L NL +L + +N +++LP ++G LK L  LDL  N L+ +P E
Sbjct: 10  LNLSTNQLRVLPDDVDKLVNLEVLVLSNNMLKKLPSQIGSLKKLRELDLEENELDTIPNE 69

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE--------------- 302
           IG  + L  L +Q N+LV +P  +GNL NLT LR   N L S+PE               
Sbjct: 70  IGFVSSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENNLTSLPEEIGNLDSLKSLYIND 129

Query: 303 ---------TLSKCVHLNEFNVEGCALSSLP 324
                     L+ C  L   ++E C LS +P
Sbjct: 130 NPSLHNLPFELALCASLEIMSIENCPLSQIP 160



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 85/154 (55%), Gaps = 1/154 (0%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           + EL L  N+L  LP  +  + NL  L L+ N L  LP  + +L++LR LDL  N+L+ +
Sbjct: 7   MTELNLSTNQLRVLPDDVDKLVNLEVLVLSNNMLKKLPSQIGSLKKLRELDLEENELDTI 66

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  +  ++SL  L+++ N++  +   I  L+NL+ L   +N +  LP E+G L +L +L 
Sbjct: 67  PNEIGFVSSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENNLTSLPEEIGNLDSLKSLY 126

Query: 246 LAHN-HLEELPKEIGNCTMLVTLDLQHNELVNIP 278
           +  N  L  LP E+  C  L  + +++  L  IP
Sbjct: 127 INDNPSLHNLPFELALCASLEIMSIENCPLSQIP 160



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 1/154 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS + +  LP  V+KL +LE L L  N L  LPSQIG +  L  L L EN L ++P+ 
Sbjct: 10  LNLSTNQLRVLPDDVDKLVNLEVLVLSNNMLKKLPSQIGSLKKLRELDLEENELDTIPNE 69

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  +  L  L ++ NKL  LP  +  LT+L  L    N + ++  +I  L +L  L + D
Sbjct: 70  IGFVSSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENNLTSLPEEIGNLDSLKSLYIND 129

Query: 226 N-KIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
           N  +  LP EL    +L  + + +  L ++P EI
Sbjct: 130 NPSLHNLPFELALCASLEIMSIENCPLSQIPPEI 163



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 73/119 (61%), Gaps = 2/119 (1%)

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           ++ L++  N++R LP ++ +L NL  L L++N L++LP +IG+   L  LDL+ NEL  I
Sbjct: 7   MTELNLSTNQLRVLPDDVDKLVNLEVLVLSNNMLKKLPSQIGSLKKLRELDLEENELDTI 66

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSI 334
           P+ +G + +LT+L +  N+L  +P T+    +L +       L+SLP+  G L SL S+
Sbjct: 67  PNEIGFVSSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENNLTSLPEEIGNLDSLKSL 125



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 27/189 (14%)

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G  + +T L LS N+L  +P+ + K V+L    +    L  LP  + S           
Sbjct: 1   MGCWLAMTELNLSTNQLRVLPDDVDKLVNLEVLVLSNNMLKKLPSQIGS----------- 49

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
                            +  ++ E N++D IP  I     +L+K+ ++ N L  LP  +G
Sbjct: 50  --------------LKKLRELDLEENELDTIPNEI-GFVSSLTKLWIQSNKLVGLPRTIG 94

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN-LLKKLPSSIGNLRKLKCLDLEEN 459
               LT+L  G N ++ L E+I NL +L+ L +++N  L  LP  +     L+ + +E  
Sbjct: 95  NLTNLTDLRAGENNLTSLPEEIGNLDSLKSLYINDNPSLHNLPFELALCASLEIMSIENC 154

Query: 460 KLESLPNEI 468
            L  +P EI
Sbjct: 155 PLSQIPPEI 163


>gi|255084227|ref|XP_002508688.1| predicted protein [Micromonas sp. RCC299]
 gi|226523965|gb|ACO69946.1| predicted protein [Micromonas sp. RCC299]
          Length = 518

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 181/473 (38%), Positives = 262/473 (55%), Gaps = 30/473 (6%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           +T LP  + +LT L+EL L+GN L SLP++IG +T+LT L L  + LTSLP  +  L  L
Sbjct: 8   LTSLPAEIGQLTSLKELRLHGNGLTSLPAEIGQLTSLTLLILDHDELTSLPAEIGQLASL 67

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRF---------------------NRIKTVHPD 211
             LDL +N+L  LP  + +LTSL  L L                       NR+ ++  +
Sbjct: 68  VELDLSYNQLTSLPAEIGQLTSLVKLDLTTWLEEPPSLLEELDSWELNLGNNRLTSLPAE 127

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
           I  L++L  L++  NK+ ELP E+G+L +LV L+L +N L  LP EIG  T LV L+L  
Sbjct: 128 IGQLTSLVELNLEHNKLTELPAEIGQLASLVELNLGNNRLTSLPAEIGQLTSLVELNLDD 187

Query: 272 NE-LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLL 328
           N  L  +P  +G L +L  L L  NRL S+P  + +   L    +    L+SLP   G L
Sbjct: 188 NTPLTELPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTSLKRLFLHRNQLTSLPAEIGQL 247

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           +SL  +N   L RN+ T+ P+    Q TS+  +    NQ+  +P  I  +  +L K+++ 
Sbjct: 248 ASLVELN---LHRNQLTSVPA-EIGQLTSLKRLFLHRNQLTSLPAEI-GQLTSLVKLDLT 302

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
            N LTSLP ++G    L EL L  NQ+  +  +I  L +L +L L NN L  +P+ IG L
Sbjct: 303 TNKLTSLPAEIGQLESLRELRLSGNQLRSVPAEIGQLTSLTLLDLGNNQLTSMPAEIGQL 362

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
             L  L+L  N L S+P EIG L  L+RL L  NQL S+P  IG LT+L  L +G N L 
Sbjct: 363 TSLVELNLGGNHLTSMPAEIGQLASLKRLFLHRNQLTSMPAEIGQLTSLEMLHLGGNQLM 422

Query: 509 SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           S+P E G L +L  L L+ N  L ++P E+   ++L+++ L    L+ +P+EI
Sbjct: 423 SVPAEAGQLTSLKRLLLDRNQ-LTSVPAEIGQLTSLEMLHLGGNQLTSVPAEI 474



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/376 (34%), Positives = 204/376 (54%), Gaps = 27/376 (7%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS-LT 160
           +++ L+L  + +T LP  + +L  L EL L  N+L SLP++IG +T+L  L L +N+ LT
Sbjct: 133 SLVELNLEHNKLTELPAEIGQLASLVELNLGNNRLTSLPAEIGQLTSLVELNLDDNTPLT 192

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  L  LR L+L +N+L  LP  + +LTSLK L+L  N++ ++  +I  L++L  
Sbjct: 193 ELPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLASLVE 252

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  N++  +P E+G+L +L  L L  N L  LP EIG  T LV LDL  N+L ++P  
Sbjct: 253 LNLHRNQLTSVPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLTSLVKLDLTTNKLTSLPAE 312

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLN-----------------------EFNVEG 317
           +G L +L  LRLS N+L SVP  + +   L                        E N+ G
Sbjct: 313 IGQLESLRELRLSGNQLRSVPAEIGQLTSLTLLDLGNNQLTSMPAEIGQLTSLVELNLGG 372

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             L+S+P  +   L S+  + L RN+ T+ P+    Q TS+  ++   NQ+  +P     
Sbjct: 373 NHLTSMPAEI-GQLASLKRLFLHRNQLTSMPAE-IGQLTSLEMLHLGGNQLMSVPAE-AG 429

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           +  +L ++ +  N LTS+P ++G    L  L+LG NQ++ +  +I  L +L  L L  N 
Sbjct: 430 QLTSLKRLLLDRNQLTSVPAEIGQLTSLEMLHLGGNQLTSVPAEIGQLTSLWTLHLGGNQ 489

Query: 438 LKKLPSSIGNLRKLKC 453
           L  LP++I +L    C
Sbjct: 490 LTSLPAAIRDLGAADC 505



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 108/184 (58%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E++  L LS + +  +P  + +LT L  L L  N+L S+P++IG +T+L  L L  N LT
Sbjct: 317 ESLRELRLSGNQLRSVPAEIGQLTSLTLLDLGNNQLTSMPAEIGQLTSLVELNLGGNHLT 376

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           S+P  +  L  L+ L L  N+L  +P  + +LTSL++L+L  N++ +V  +   L++L  
Sbjct: 377 SMPAEIGQLASLKRLFLHRNQLTSMPAEIGQLTSLEMLHLGGNQLMSVPAEAGQLTSLKR 436

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  +P E+G+L +L  L L  N L  +P EIG  T L TL L  N+L ++P  
Sbjct: 437 LLLDRNQLTSVPAEIGQLTSLEMLHLGGNQLTSVPAEIGQLTSLWTLHLGGNQLTSLPAA 496

Query: 281 LGNL 284
           + +L
Sbjct: 497 IRDL 500



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 119/222 (53%), Gaps = 22/222 (9%)

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
           +N   NQ+  +P  I  +  +L ++ +  N LTSLP ++G    LT L L  ++++ L  
Sbjct: 1   MNLICNQLTSLPAEI-GQLTSLKELRLHGNGLTSLPAEIGQLTSLTLLILDHDELTSLPA 59

Query: 421 DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL-----------EE----------N 459
           +I  L +L  L LS N L  LP+ IG L  L  LDL           EE          N
Sbjct: 60  EIGQLASLVELDLSYNQLTSLPAEIGQLTSLVKLDLTTWLEEPPSLLEELDSWELNLGNN 119

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L SLP EIG L  L  L L+ N+L  LP  IG L +L  L++G N L S+P EIG L +
Sbjct: 120 RLTSLPAEIGQLTSLVELNLEHNKLTELPAEIGQLASLVELNLGNNRLTSLPAEIGQLTS 179

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L L+DNT L  +P E+   ++L+ ++L N  L+ +P+EI
Sbjct: 180 LVELNLDDNTPLTELPAEIGQLTSLRELNLCNNRLTSLPAEI 221


>gi|186686076|ref|YP_001869272.1| Miro domain-containing protein [Nostoc punctiforme PCC 73102]
 gi|186468528|gb|ACC84329.1| Miro domain protein [Nostoc punctiforme PCC 73102]
          Length = 1109

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 170/432 (39%), Positives = 246/432 (56%), Gaps = 3/432 (0%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE 156
           +  ++ +  LDLS   +T LPP + +LT+L+ L+L  N+L+SLP +IG +TNL  L L  
Sbjct: 12  QAVKDEVTELDLSYKGLTILPPEIGQLTNLQTLHLDSNQLSSLPPKIGQLTNLQTLHLRS 71

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N L+SLP  +  L  L+ L L +N+L+ LP  + +LT+L+ L+L  N++ ++ P+I  L+
Sbjct: 72  NQLSSLPPEIGQLTNLQTLHLGNNQLSSLPPEIGQLTNLQSLHLWINQLSSLPPEIGQLT 131

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           NL  L +  N++  LPPE G+L NL +LDL  N L  LP EIG  T L +LDL  N+L +
Sbjct: 132 NLQSLDLDSNQLSSLPPEFGQLTNLQSLDLGSNQLSSLPPEIGQLTKLQSLDLSRNQLSS 191

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +  L  L  L L  N+L S+P    +   L   ++    LSSLP  ++  LT + +
Sbjct: 192 LPPEIVQLTKLQSLDLRSNQLSSLPPEFGQLTKLQSLDLGSNQLSSLPPEIV-QLTKLQS 250

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L  N+ ++ P     Q T++ S++   NQ+  +P  I    K L  + +  N L+SLP
Sbjct: 251 LDLGSNQLSSLPPEI-VQLTNLQSLDLSSNQLSSLPPEIVQLTK-LQSLYLSSNQLSSLP 308

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++     L  L+LG+NQ+S L  +I  L  L+ L L +N L  LP  I  L  L+ LDL
Sbjct: 309 PEIVQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDL 368

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+L SLP EI  L +LQ L L SNQL SLP  I  LT L  L +G N L S+P EI  
Sbjct: 369 SSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPREIRQ 428

Query: 517 LENLHTLYLNDN 528
           L NL  L L  N
Sbjct: 429 LSNLKKLDLRRN 440



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 150/388 (38%), Positives = 209/388 (53%), Gaps = 27/388 (6%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           LDL +  L  LP  + +LT+L+ L+L  N++ ++ P I  L+NL  L +R N++  LPPE
Sbjct: 21  LDLSYKGLTILPPEIGQLTNLQTLHLDSNQLSSLPPKIGQLTNLQTLHLRSNQLSSLPPE 80

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
           +G+L NL TL L +N L  LP EIG  T L +L L  N+L ++P  +G L NL  L L  
Sbjct: 81  IGQLTNLQTLHLGNNQLSSLPPEIGQLTNLQSLHLWINQLSSLPPEIGQLTNLQSLDLDS 140

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
           N+L S+P    +  +L   ++    LSSLP                       P  G  Q
Sbjct: 141 NQLSSLPPEFGQLTNLQSLDLGSNQLSSLP-----------------------PEIG--Q 175

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
            T + S++   NQ+  +P  I    K L  ++++ N L+SLP + G    L  L+LG+NQ
Sbjct: 176 LTKLQSLDLSRNQLSSLPPEIVQLTK-LQSLDLRSNQLSSLPPEFGQLTKLQSLDLGSNQ 234

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +S L  +I  L  L+ L L +N L  LP  I  L  L+ LDL  N+L SLP EI  L +L
Sbjct: 235 LSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLTKL 294

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           Q L L SNQL SLP  I  LT L  L +G N L S+P EI  L  L +L L  N  L+++
Sbjct: 295 QSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQ-LSSL 353

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEIV 562
           P E+   +NLQ + L +  LS +P EIV
Sbjct: 354 PPEIVQLTNLQSLDLSSNQLSSLPPEIV 381



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 121/200 (60%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +LDL  + ++ LPP + +LT+L+ L L  N+L+SLP +I  +T L  L L+ N L+SLP 
Sbjct: 250 SLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPP 309

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            +  L +L+ LDL  N+L+ LP  + +LT L+ L L  N++ ++ P+I  L+NL  L + 
Sbjct: 310 EIVQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLS 369

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
            N++  LPPE+ +L  L +L L+ N L  LP EI   T L +LDL  N+L ++P  +  L
Sbjct: 370 SNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPREIRQL 429

Query: 285 INLTRLRLSYNRLESVPETL 304
            NL +L L  N +   PE L
Sbjct: 430 SNLKKLDLRRNPVPIPPEIL 449



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/181 (40%), Positives = 113/181 (62%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +LDLS + ++ LPP + +LT L+ LYL  N+L+SLP +I  +T L  L L  N L+S
Sbjct: 270 NLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSS 329

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L +L+ LDL  N+L+ LP  + +LT+L+ L L  N++ ++ P+I  L+ L  L
Sbjct: 330 LPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSL 389

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  LPPE+ +L  L +LDL  N L  LP+EI   + L  LDL+ N +   P++L
Sbjct: 390 YLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPREIRQLSNLKKLDLRRNPVPIPPEIL 449

Query: 282 G 282
           G
Sbjct: 450 G 450


>gi|351705772|gb|EHB08691.1| Leucine-rich repeat protein SHOC-2 [Heterocephalus glaber]
          Length = 197

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 128/196 (65%), Positives = 156/196 (79%)

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           MKDN  TSL LD GTW  + ELNL TNQ +K+ ED+  LV+LEVL+L NNLLKKLP  +G
Sbjct: 1   MKDNQFTSLLLDFGTWTNMVELNLATNQFTKIPEDLYGLVSLEVLILPNNLLKKLPHGLG 60

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
           NLRKL+ LDLEENKLESLPNEI +LK+LQ+L+L +NQL +LPR I H TNL++L + EN 
Sbjct: 61  NLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIAHPTNLTHLGLRENL 120

Query: 507 LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGP 566
           L   PEEIGTLENL  L LNDN  L+++PFELALCS L +MS++NCPLS +P++IV GG 
Sbjct: 121 LTHPPEEIGTLENLEELCLNDNPNLHSLPFELALCSKLSVMSIENCPLSHLPAQIVAGGL 180

Query: 567 SLIIRYLKMQGPYRTM 582
             II++LKMQGPYRTM
Sbjct: 181 PCIIQFLKMQGPYRTM 196



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 94/178 (52%), Gaps = 1/178 (0%)

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           + +N  TSL         +  L+L  N+  ++P  +Y L SL++L L  N +K +   + 
Sbjct: 1   MKDNQFTSLLLDFGTWTNMVELNLATNQFTKIPEDLYGLVSLEVLILPNNLLKKLPHGLG 60

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L  L  L + +NK+  LP E+  LK+L  L L +N L  LP+ I + T L  L L+ N 
Sbjct: 61  NLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIAHPTNLTHLGLRENL 120

Query: 274 LVNIPDMLGNLINLTRLRLSYN-RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           L + P+ +G L NL  L L+ N  L S+P  L+ C  L+  ++E C LS LP  +++ 
Sbjct: 121 LTHPPEEIGTLENLEELCLNDNPNLHSLPFELALCSKLSVMSIENCPLSHLPAQIVAG 178



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 86/156 (55%), Gaps = 1/156 (0%)

Query: 124 THLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLN 183
           T++ EL L  N+   +P  +  + +L  L L  N L  LP  L NL++LR LDL  NKL 
Sbjct: 17  TNMVELNLATNQFTKIPEDLYGLVSLEVLILPNNLLKKLPHGLGNLRKLRELDLEENKLE 76

Query: 184 ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVT 243
            LP  +  L  L+ L L  N++ T+   I + +NL+ L +R+N +   P E+G L+NL  
Sbjct: 77  SLPNEIAYLKDLQKLVLTNNQLTTLPRGIAHPTNLTHLGLRENLLTHPPEEIGTLENLEE 136

Query: 244 LDLAHN-HLEELPKEIGNCTMLVTLDLQHNELVNIP 278
           L L  N +L  LP E+  C+ L  + +++  L ++P
Sbjct: 137 LCLNDNPNLHSLPFELALCSKLSVMSIENCPLSHLP 172



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 94/224 (41%), Gaps = 50/224 (22%)

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           M+DN+   L  + G   N+V L+LA N   ++P+++     L  L L +N L  +P  LG
Sbjct: 1   MKDNQFTSLLLDFGTWTNMVELNLATNQFTKIPEDLYGLVSLEVLILPNNLLKKLPHGLG 60

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
           NL  L  L L  N+LES+P         NE               ++ L  +  + L+ N
Sbjct: 61  NLRKLRELDLEENKLESLP---------NE---------------IAYLKDLQKLVLTNN 96

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
           + T  P G                          +   NL+ + +++NLLT  P ++GT 
Sbjct: 97  QLTTLPRG-------------------------IAHPTNLTHLGLRENLLTHPPEEIGTL 131

Query: 403 VGLTELNLGTN-QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
             L EL L  N  +  L  ++     L V+ + N  L  LP+ I
Sbjct: 132 ENLEELCLNDNPNLHSLPFELALCSKLSVMSIENCPLSHLPAQI 175


>gi|116487781|gb|AAI25840.1| Si:ch211-197i12.3 protein [Danio rerio]
          Length = 277

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 128/217 (58%), Positives = 168/217 (77%), Gaps = 6/217 (2%)

Query: 66  TVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTH 125
           T+K P    P P+T+KK    ++  + KE  +C+EEN + LDLSK SI  LP S+++LT 
Sbjct: 50  TIKRPN---PPPSTRKK---SSNAEVIKELNKCREENSMRLDLSKRSIHLLPSSIKELTQ 103

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           L ELYLY NKL SLP ++G ++ L  L L+ENSLTSLPDSL NL++LR+LDLRHNKL E+
Sbjct: 104 LTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREI 163

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P VVY+++SL  LYLRFNRI TV  DI+ LS L+MLS+R+NKI++LP E+GEL NL+TLD
Sbjct: 164 PAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLD 223

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +AHN LE LPKEIGNCT +  LDLQHN+L+++P+ +G
Sbjct: 224 VAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIG 260



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 101/184 (54%), Gaps = 1/184 (0%)

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           R +N  ++++    +  LP  +     LTEL L +N++  L  ++  L  L  L LS N 
Sbjct: 77  REENSMRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENS 136

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L  LP S+ NL+KL+ LDL  NKL  +P  +  +  L  L L+ N++ ++ + I +L+ L
Sbjct: 137 LTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKL 196

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
           + LS+ EN ++ +P EIG L NL TL +  N  L ++P E+  C+ +  + L +  L  +
Sbjct: 197 TMLSIRENKIKQLPAEIGELCNLITLDVAHNQ-LEHLPKEIGNCTQITNLDLQHNDLLDL 255

Query: 558 PSEI 561
           P  I
Sbjct: 256 PETI 259



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 30/210 (14%)

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNK 343
           N  RL LS   +  +P ++ +   L E  +    L SLP   G LS L ++    LS N 
Sbjct: 80  NSMRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTL---ALSENS 136

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
            T+ P         +  ++  HN++ +IP  ++  +                        
Sbjct: 137 LTSLPDSL-DNLKKLRMLDLRHNKLREIPAVVYRVS------------------------ 171

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            LT L L  N+I+ + +DI+NL  L +L +  N +K+LP+ IG L  L  LD+  N+LE 
Sbjct: 172 SLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 231

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           LP EIG   ++  L LQ N L+ LP  IG 
Sbjct: 232 LPKEIGNCTQITNLDLQHNDLLDLPETIGE 261



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 23/157 (14%)

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           L+++ +  N L SLP ++G   GL  L L  N ++ L + + NL  L +L L +N L+++
Sbjct: 104 LTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREI 163

Query: 442 PS-----------------------SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
           P+                        I NL KL  L + ENK++ LP EIG L  L  L 
Sbjct: 164 PAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLD 223

Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           +  NQL  LP+ IG+ T ++ L +  N+L  +PE IG
Sbjct: 224 VAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIG 260



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 28/219 (12%)

Query: 253 ELPKEIGNCTM--LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           E+ KE+  C     + LDL    +  +P  +  L  LT L L  N+L+S+P  +     L
Sbjct: 68  EVIKELNKCREENSMRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGL 127

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK 370
               +   +L+SLPD L                              +  ++  HN++ +
Sbjct: 128 VTLALSENSLTSLPDSL-------------------------DNLKKLRMLDLRHNKLRE 162

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           IP  ++ R  +L+ + ++ N +T++  D+     LT L++  N+I +L  +I  L NL  
Sbjct: 163 IPAVVY-RVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLIT 221

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           L +++N L+ LP  IGN  ++  LDL+ N L  LP  IG
Sbjct: 222 LDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIG 260


>gi|255070745|ref|XP_002507454.1| predicted protein [Micromonas sp. RCC299]
 gi|226522729|gb|ACO68712.1| predicted protein [Micromonas sp. RCC299]
          Length = 642

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 173/499 (34%), Positives = 268/499 (53%), Gaps = 34/499 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L  + +T +P  + +LT L +LYL  N+L S+P+ IG +T+L  L L  N LTS+P  
Sbjct: 148 LTLYGNQLTSVPAEIGQLTSLTDLYLGCNQLTSVPAWIGQLTSLKELTLYGNQLTSVPAE 207

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L+ L L+ NKL  +P  + +L +LK+L L  N++ +V  +I  L++L  L +  
Sbjct: 208 IGQLAALQWLSLKDNKLTSVPAEIGQLRALKLLRLNGNQLTSVPAEIGQLASLENLLLGH 267

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  +P E+G+L +L  L L HN L  +P EIG  T LV L+L+ N+L ++P  +  L 
Sbjct: 268 NQLTSVPAEIGQLTSLRKLYLDHNKLTSVPVEIGQLTSLVRLELEGNQLTSVPAEIWQLT 327

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L  L L YN+L SVP  + +   L E  + G  L+S+P  +   L+++  ++LSRN+ T
Sbjct: 328 SLKWLNLGYNQLTSVPAEIGQLAALKELCLYGNQLTSVPAEV-GRLSALRKLSLSRNRLT 386

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGI----------------------FSRAKNLS 383
           + P+    Q TS+  +    NQ+  +P  I                        +  +L 
Sbjct: 387 SLPAE-IGQLTSLRELRLSDNQLTSVPAEIGQLRALKLLILLGNQLTSVPAEIGQLASLV 445

Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
            ++++DN LT +P ++G    L  L L  NQ++ L  +I  L +L   +L  N L  +P+
Sbjct: 446 GLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLPAEIGQLTSLVESLLGGNQLTSVPA 505

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
            IG L  L  LDL +N+L S+P E+G L  L+ L +  N L  LP  IG LT+L  L + 
Sbjct: 506 EIGQLTSLTHLDLVDNQLTSVPAEVGRLTALRELNVSRNALTLLPAEIGRLTSLKGLYLD 565

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVV 563
           EN L S+P EIG L +L  L+LNDN  L ++P E+ L   L I+ L    L+ +P+    
Sbjct: 566 ENELTSVPAEIGQLTSLQELWLNDNQ-LTSLPAEIGLLIWLHILRLGGNQLTSMPAA--- 621

Query: 564 GGPSLIIRYLKMQGPYRTM 582
                 IR LK  G +  M
Sbjct: 622 ------IRKLKAAGCHVDM 634



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 169/457 (36%), Positives = 260/457 (56%), Gaps = 4/457 (0%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +L+L  + +T +P  + +L  LE+L+L GN+L S+P++IG +  LT L L  N LTS+P 
Sbjct: 101 HLELWSNRLTSVPAEIGQLASLEKLHLEGNQLTSVPAEIGQLVALTELTLYGNQLTSVPA 160

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            +  L  L  L L  N+L  +P  + +LTSLK L L  N++ +V  +I  L+ L  LS++
Sbjct: 161 EIGQLTSLTDLYLGCNQLTSVPAWIGQLTSLKELTLYGNQLTSVPAEIGQLAALQWLSLK 220

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           DNK+  +P E+G+L+ L  L L  N L  +P EIG    L  L L HN+L ++P  +G L
Sbjct: 221 DNKLTSVPAEIGQLRALKLLRLNGNQLTSVPAEIGQLASLENLLLGHNQLTSVPAEIGQL 280

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
            +L +L L +N+L SVP  + +   L    +EG  L+S+P  +   LTS+  + L  N+ 
Sbjct: 281 TSLRKLYLDHNKLTSVPVEIGQLTSLVRLELEGNQLTSVPAEIW-QLTSLKWLNLGYNQL 339

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
           T+ P+    Q  ++  +    NQ+  +P  +  R   L K+++  N LTSLP ++G    
Sbjct: 340 TSVPA-EIGQLAALKELCLYGNQLTSVPAEV-GRLSALRKLSLSRNRLTSLPAEIGQLTS 397

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L EL L  NQ++ +  +I  L  L++L+L  N L  +P+ IG L  L  L L +N+L  +
Sbjct: 398 LRELRLSDNQLTSVPAEIGQLRALKLLILLGNQLTSVPAEIGQLASLVGLHLRDNRLTGV 457

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P EIG L  L+ L L  NQL SLP  IG LT+L    +G N L S+P EIG L +L  L 
Sbjct: 458 PAEIGQLTSLEWLYLAENQLTSLPAEIGQLTSLVESLLGGNQLTSVPAEIGQLTSLTHLD 517

Query: 525 LNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L DN  L ++P E+   + L+ +++    L+ +P+EI
Sbjct: 518 LVDNQ-LTSVPAEVGRLTALRELNVSRNALTLLPAEI 553



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 163/456 (35%), Positives = 253/456 (55%), Gaps = 4/456 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL    +T +P  + +LT L  L+L  N+L S+P++IG +T+LT L L  N LTS+P  
Sbjct: 33  LDLRNYHLTSVPAEIGQLTSLGVLHLDNNQLTSVPAEIGQLTSLTHLYLGCNQLTSVPAW 92

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L  L+L  N+L  +P  + +L SL+ L+L  N++ +V  +I  L  L+ L++  
Sbjct: 93  IGQLTSLTHLELWSNRLTSVPAEIGQLASLEKLHLEGNQLTSVPAEIGQLVALTELTLYG 152

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  +P E+G+L +L  L L  N L  +P  IG  T L  L L  N+L ++P  +G L 
Sbjct: 153 NQLTSVPAEIGQLTSLTDLYLGCNQLTSVPAWIGQLTSLKELTLYGNQLTSVPAEIGQLA 212

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L  N+L SVP  + +   L    + G  L+S+P   +  L S+ N+ L  N+ T
Sbjct: 213 ALQWLSLKDNKLTSVPAEIGQLRALKLLRLNGNQLTSVPAE-IGQLASLENLLLGHNQLT 271

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P+    Q TS+  +  +HN++  +P  I  +  +L ++ ++ N LTS+P ++     L
Sbjct: 272 SVPA-EIGQLTSLRKLYLDHNKLTSVPVEI-GQLTSLVRLELEGNQLTSVPAEIWQLTSL 329

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             LNLG NQ++ +  +I  L  L+ L L  N L  +P+ +G L  L+ L L  N+L SLP
Sbjct: 330 KWLNLGYNQLTSVPAEIGQLAALKELCLYGNQLTSVPAEVGRLSALRKLSLSRNRLTSLP 389

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            EIG L  L+ L L  NQL S+P  IG L  L  L +  N L S+P EIG L +L  L+L
Sbjct: 390 AEIGQLTSLRELRLSDNQLTSVPAEIGQLRALKLLILLGNQLTSVPAEIGQLASLVGLHL 449

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            DN  L  +P E+   ++L+ + L    L+ +P+EI
Sbjct: 450 RDNR-LTGVPAEIGQLTSLEWLYLAENQLTSLPAEI 484



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/372 (32%), Positives = 195/372 (52%), Gaps = 26/372 (6%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           NL L  + +T +P  + +LT L +LYL  NKL S+P +IG +T+L  L L  N LTS+P 
Sbjct: 262 NLLLGHNQLTSVPAEIGQLTSLRKLYLDHNKLTSVPVEIGQLTSLVRLELEGNQLTSVPA 321

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            +  L  L+ L+L +N+L  +P  + +L +LK L L  N++ +V  ++  LS L  LS+ 
Sbjct: 322 EIWQLTSLKWLNLGYNQLTSVPAEIGQLAALKELCLYGNQLTSVPAEVGRLSALRKLSLS 381

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTM--------------------- 263
            N++  LP E+G+L +L  L L+ N L  +P EIG                         
Sbjct: 382 RNRLTSLPAEIGQLTSLRELRLSDNQLTSVPAEIGQLRALKLLILLGNQLTSVPAEIGQL 441

Query: 264 --LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             LV L L+ N L  +P  +G L +L  L L+ N+L S+P  + +   L E  + G  L+
Sbjct: 442 ASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLPAEIGQLTSLVESLLGGNQLT 501

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
           S+P  +   LTS+ ++ L  N+ T+ P+    + T++  +N   N +  +P  I  R  +
Sbjct: 502 SVPAEI-GQLTSLTHLDLVDNQLTSVPAE-VGRLTALRELNVSRNALTLLPAEI-GRLTS 558

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           L  + + +N LTS+P ++G    L EL L  NQ++ L  +I  L+ L +L L  N L  +
Sbjct: 559 LKGLYLDENELTSVPAEIGQLTSLQELWLNDNQLTSLPAEIGLLIWLHILRLGGNQLTSM 618

Query: 442 PSSIGNLRKLKC 453
           P++I  L+   C
Sbjct: 619 PAAIRKLKAAGC 630



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 108/217 (49%), Gaps = 29/217 (13%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           +++ L L  + +T +P  + +LT LE LYL  N+L SLP++IG +T+L    L  N LTS
Sbjct: 443 SLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLPAEIGQLTSLVESLLGGNQLTS 502

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  +  L  L  LDL  N+L  +P  V +LT+L+                        L
Sbjct: 503 VPAEIGQLTSLTHLDLVDNQLTSVPAEVGRLTALR-----------------------EL 539

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++  N +  LP E+G L +L  L L  N L  +P EIG  T L  L L  N+L ++P  +
Sbjct: 540 NVSRNALTLLPAEIGRLTSLKGLYLDENELTSVPAEIGQLTSLQELWLNDNQLTSLPAEI 599

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
           G LI L  LRL  N+L S+P  + K          GC
Sbjct: 600 GLLIWLHILRLGGNQLTSMPAAIRK------LKAAGC 630


>gi|255084109|ref|XP_002508629.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
 gi|226523906|gb|ACO69887.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
          Length = 1098

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 163/461 (35%), Positives = 264/461 (57%), Gaps = 5/461 (1%)

Query: 103 ILNLDLSKSSIT-HLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++ L+L++  +T  +P  V +LT L EL + GN L S+P++IG +T+L  L L+ N LTS
Sbjct: 243 VVQLELNEFGLTGAVPAEVGRLTALRELVVGGNALTSVPAEIGLLTSLRELWLSGNRLTS 302

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P+ +  L  +  L L  N+L  LP+ + +L SL++L L  N++ +V  +I+ L++L  L
Sbjct: 303 VPEEIGQLTAMTELYLNANQLTSLPVEIGQLRSLEMLQLGGNQLTSVPAEIRQLTSLKCL 362

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + +N++  +P E+G+L +L++L L  N L  +P EIG  T +  L L  N+L ++P  +
Sbjct: 363 DLNNNQLTSVPAEIGQLTSLISLHLGKNQLTSVPAEIGQLTAMTELYLNANQLTSLPAEI 422

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L  LT L L  N+L SVP  + +   L E N+    L+++P   +  L S     LS 
Sbjct: 423 WQLTPLTELYLYGNQLTSVPAEIGQLRSLTELNLSSNQLTNVP-AEIGQLRSRREFGLSG 481

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T+ P+    Q TS+       NQ+  +P  I  R  +L ++ ++DN LTS+P ++G 
Sbjct: 482 NQLTSVPA-EIGQLTSLEEFGLSGNQLTSVPAEI-GRLTSLERLWLEDNKLTSVPAEIGR 539

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L L  NQ++ +  ++  L +LE L L +N L  +P  +G L  L  L+L  N+L
Sbjct: 540 LRALEWLYLHGNQLTSVPAEVGQLTSLEKLDLQHNQLTSVPVEVGQLTSLMSLNLGNNRL 599

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            S+P EIG L  L  L L  N+L S+P  I  LT+L  LS+  N L S+P EIG L +L 
Sbjct: 600 TSVPAEIGQLTSLWELWLHDNELTSVPAEIWQLTSLRELSLAVNQLTSVPAEIGQLTSLK 659

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           TL L  N  L ++P E+   ++L+ + LD+  L+ +P++I+
Sbjct: 660 TLELGGNQ-LTSVPAEIGQLTSLETLDLDDNKLTSVPADIL 699



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 170/493 (34%), Positives = 266/493 (53%), Gaps = 28/493 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + +T +P  + +LT + ELYL  N+L SLP +IG + +L  L L  N LTS+P  
Sbjct: 293 LWLSGNRLTSVPEEIGQLTAMTELYLNANQLTSLPVEIGQLRSLEMLQLGGNQLTSVPAE 352

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L+ LDL +N+L  +P  + +LTSL  L+L  N++ +V  +I  L+ ++ L +  
Sbjct: 353 IRQLTSLKCLDLNNNQLTSVPAEIGQLTSLISLHLGKNQLTSVPAEIGQLTAMTELYLNA 412

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+ +L  L  L L  N L  +P EIG    L  L+L  N+L N+P  +G L 
Sbjct: 413 NQLTSLPAEIWQLTPLTELYLYGNQLTSVPAEIGQLRSLTELNLSSNQLTNVPAEIGQLR 472

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +     LS N+L SVP  + +   L EF + G  L+S+P   +  LTS+  + L  NK T
Sbjct: 473 SRREFGLSGNQLTSVPAEIGQLTSLEEFGLSGNQLTSVP-AEIGRLTSLERLWLEDNKLT 531

Query: 346 AYPS----------------------GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
           + P+                          Q TS+  ++ +HNQ+  +P  +  +  +L 
Sbjct: 532 SVPAEIGRLRALEWLYLHGNQLTSVPAEVGQLTSLEKLDLQHNQLTSVPVEV-GQLTSLM 590

Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
            +N+ +N LTS+P ++G    L EL L  N+++ +  +I  L +L  L L+ N L  +P+
Sbjct: 591 SLNLGNNRLTSVPAEIGQLTSLWELWLHDNELTSVPAEIWQLTSLRELSLAVNQLTSVPA 650

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI-GHLTNLSYLSV 502
            IG L  LK L+L  N+L S+P EIG L  L+ L L  N+L S+P  I   LT+L  L +
Sbjct: 651 EIGQLTSLKTLELGGNQLTSVPAEIGQLTSLETLDLDDNKLTSVPADILQQLTSLESLEL 710

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           G+N+L S PEEIG L +L  L L  N    ++P E+   ++L+ + L    L+ +P+EI 
Sbjct: 711 GDNHLTSWPEEIGQLTSLKELTLRGNKLTTSVPAEIGQLTSLKTLDLRCNQLTSVPAEI- 769

Query: 563 VGGPSLIIRYLKM 575
             G    +R+L +
Sbjct: 770 --GQLTSLRWLWL 780



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 169/457 (36%), Positives = 259/457 (56%), Gaps = 5/457 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L +  +++T +P  +  LT L EL+L GN+L S+P +IG +T +T L L  N LTSLP  
Sbjct: 270 LVVGGNALTSVPAEIGLLTSLRELWLSGNRLTSVPEEIGQLTAMTELYLNANQLTSLPVE 329

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L +L L  N+L  +P  + +LTSLK L L  N++ +V  +I  L++L  L +  
Sbjct: 330 IGQLRSLEMLQLGGNQLTSVPAEIRQLTSLKCLDLNNNQLTSVPAEIGQLTSLISLHLGK 389

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  +P E+G+L  +  L L  N L  LP EI   T L  L L  N+L ++P  +G L 
Sbjct: 390 NQLTSVPAEIGQLTAMTELYLNANQLTSLPAEIWQLTPLTELYLYGNQLTSVPAEIGQLR 449

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +LT L LS N+L +VP  + +     EF + G  L+S+P   +  LTS+    LS N+ T
Sbjct: 450 SLTELNLSSNQLTNVPAEIGQLRSRREFGLSGNQLTSVP-AEIGQLTSLEEFGLSGNQLT 508

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P+    + TS+  +  E N++  +P  I  R + L  + +  N LTS+P ++G    L
Sbjct: 509 SVPA-EIGRLTSLERLWLEDNKLTSVPAEI-GRLRALEWLYLHGNQLTSVPAEVGQLTSL 566

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            +L+L  NQ++ +  ++  L +L  L L NN L  +P+ IG L  L  L L +N+L S+P
Sbjct: 567 EKLDLQHNQLTSVPVEVGQLTSLMSLNLGNNRLTSVPAEIGQLTSLWELWLHDNELTSVP 626

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            EI  L  L+ L L  NQL S+P  IG LT+L  L +G N L S+P EIG L +L TL L
Sbjct: 627 AEIWQLTSLRELSLAVNQLTSVPAEIGQLTSLKTLELGGNQLTSVPAEIGQLTSLETLDL 686

Query: 526 NDNTCLNNIPFE-LALCSNLQIMSLDNCPLSQIPSEI 561
           +DN  L ++P + L   ++L+ + L +  L+  P EI
Sbjct: 687 DDNK-LTSVPADILQQLTSLESLELGDNHLTSWPEEI 722



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 166/481 (34%), Positives = 264/481 (54%), Gaps = 29/481 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L  + +T +P  + +LT L+ L L  N+L S+P++IG +T+L  L L +N LTS+P  
Sbjct: 339 LQLGGNQLTSVPAEIRQLTSLKCLDLNNNQLTSVPAEIGQLTSLISLHLGKNQLTSVPAE 398

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  +  L L  N+L  LP  +++LT L  LYL  N++ +V  +I  L +L+ L++  
Sbjct: 399 IGQLTAMTELYLNANQLTSLPAEIWQLTPLTELYLYGNQLTSVPAEIGQLRSLTELNLSS 458

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  +P E+G+L++     L+ N L  +P EIG  T L    L  N+L ++P  +G L 
Sbjct: 459 NQLTNVPAEIGQLRSRREFGLSGNQLTSVPAEIGQLTSLEEFGLSGNQLTSVPAEIGRLT 518

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L RL L  N+L SVP  + +   L    + G  L+S+P   +  LTS+  + L  N+ T
Sbjct: 519 SLERLWLEDNKLTSVPAEIGRLRALEWLYLHGNQLTSVP-AEVGQLTSLEKLDLQHNQLT 577

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P     Q TS+ S+N  +N++  +P  I  +  +L ++ + DN LTS+P ++     L
Sbjct: 578 SVPVE-VGQLTSLMSLNLGNNRLTSVPAEI-GQLTSLWELWLHDNELTSVPAEIWQLTSL 635

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            EL+L  NQ++ +  +I  L +L+ L L  N L  +P+ IG L  L+ LDL++NKL S+P
Sbjct: 636 RELSLAVNQLTSVPAEIGQLTSLKTLELGGNQLTSVPAEIGQLTSLETLDLDDNKLTSVP 695

Query: 466 ------------------------NEIGFLKELQRLILQSNQLV-SLPRAIGHLTNLSYL 500
                                    EIG L  L+ L L+ N+L  S+P  IG LT+L  L
Sbjct: 696 ADILQQLTSLESLELGDNHLTSWPEEIGQLTSLKELTLRGNKLTTSVPAEIGQLTSLKTL 755

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
            +  N L S+P EIG L +L  L+LNDN  L ++P EL   ++L+ + L    L+ +P+E
Sbjct: 756 DLRCNQLTSVPAEIGQLTSLRWLWLNDNR-LTSVPAELGQLTSLEGLWLKGNQLTIVPAE 814

Query: 561 I 561
           I
Sbjct: 815 I 815



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 177/534 (33%), Positives = 270/534 (50%), Gaps = 79/534 (14%)

Query: 106  LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
            L L  + +T +P  + +L  LE LYL+GN+L S+P+++G +T+L  L L  N LTS+P  
Sbjct: 523  LWLEDNKLTSVPAEIGRLRALEWLYLHGNQLTSVPAEVGQLTSLEKLDLQHNQLTSVPVE 582

Query: 166  LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
            +  L  L  L+L +N+L  +P  + +LTSL  L+L  N + +V  +I  L++L  LS+  
Sbjct: 583  VGQLTSLMSLNLGNNRLTSVPAEIGQLTSLWELWLHDNELTSVPAEIWQLTSLRELSLAV 642

Query: 226  NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP-DMLGNL 284
            N++  +P E+G+L +L TL+L  N L  +P EIG  T L TLDL  N+L ++P D+L  L
Sbjct: 643  NQLTSVPAEIGQLTSLKTLELGGNQLTSVPAEIGQLTSLETLDLDDNKLTSVPADILQQL 702

Query: 285  INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             +L  L L  N L S PE + +   L E  + G  L++     +  LTS+  + L  N+ 
Sbjct: 703  TSLESLELGDNHLTSWPEEIGQLTSLKELTLRGNKLTTSVPAEIGQLTSLKTLDLRCNQL 762

Query: 345  TAYPS--GGPT--------------------QFTSVYSINFEHNQIDKIPY--------- 373
            T+ P+  G  T                    Q TS+  +  + NQ+  +P          
Sbjct: 763  TSVPAEIGQLTSLRWLWLNDNRLTSVPAELGQLTSLEGLWLKGNQLTIVPAEIRELKAAG 822

Query: 374  -------------GIFSRA---------------------KNLSKVNMKDN--------- 390
                         G  +RA                     ++  +V M+++         
Sbjct: 823  CRVDLDDGVTMDEGDDARALRTWRAMCPDLQGMWPEDEQPEDWYRVTMENDGRVVQLELE 882

Query: 391  ---LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
               L  ++P +LG    L  L+L  NQ++ L  +I  L +LEVL L+ N L  +P+ IG 
Sbjct: 883  VFGLTGAVPAELGRLSALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQ 942

Query: 448  LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
            L  L+ L L EN+L S+P EIG L  L RL L+ NQL SLP  IG L  L  LS+  N L
Sbjct: 943  LTSLRELYLYENQLTSVPAEIGQLTALARLELRDNQLTSLPAEIGQLAALEKLSLDSNQL 1002

Query: 508  QSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             S+P EIG L +L TL L+DN  L ++P ++   ++L+ + L    L+ +P EI
Sbjct: 1003 TSVPAEIGQLTSLKTLGLSDN-MLTSVPADIGQLTSLKELRLGGNQLTSVPEEI 1055



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 167/494 (33%), Positives = 263/494 (53%), Gaps = 37/494 (7%)

Query: 102  NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
            ++++L+L  + +T +P  + +LT L EL+L+ N+L S+P++I  +T+L  L LA N LTS
Sbjct: 588  SLMSLNLGNNRLTSVPAEIGQLTSLWELWLHDNELTSVPAEIWQLTSLRELSLAVNQLTS 647

Query: 162  LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI-QYLSNLSM 220
            +P  +  L  L+ L+L  N+L  +P  + +LTSL+ L L  N++ +V  DI Q L++L  
Sbjct: 648  VPAEIGQLTSLKTLELGGNQLTSVPAEIGQLTSLETLDLDDNKLTSVPADILQQLTSLES 707

Query: 221  LSMRDNKIRELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L + DN +   P E+G+L +L  L L  N L   +P EIG  T L TLDL+ N+L ++P 
Sbjct: 708  LELGDNHLTSWPEEIGQLTSLKELTLRGNKLTTSVPAEIGQLTSLKTLDLRCNQLTSVPA 767

Query: 280  MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP--------------- 324
             +G L +L  L L+ NRL SVP  L +   L    ++G  L+ +P               
Sbjct: 768  EIGQLTSLRWLWLNDNRLTSVPAELGQLTSLEGLWLKGNQLTIVPAEIRELKAAGCRVDL 827

Query: 325  -DGLLSSLTSINNITLSRNKFTAYP---SGGPT--QFTSVYSINFEHN----QIDKIPYG 374
             DG+  ++   ++    R      P      P   Q    Y +  E++    Q++   +G
Sbjct: 828  DDGV--TMDEGDDARALRTWRAMCPDLQGMWPEDEQPEDWYRVTMENDGRVVQLELEVFG 885

Query: 375  I-------FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
            +         R   L  +++  N +TSLP ++G    L  L L  NQ++ +  +I  L +
Sbjct: 886  LTGAVPAELGRLSALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQLTS 945

Query: 428  LEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
            L  L L  N L  +P+ IG L  L  L+L +N+L SLP EIG L  L++L L SNQL S+
Sbjct: 946  LRELYLYENQLTSVPAEIGQLTALARLELRDNQLTSLPAEIGQLAALEKLSLDSNQLTSV 1005

Query: 488  PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIM 547
            P  IG LT+L  L + +N L S+P +IG L +L  L L  N  L ++P E+   ++LQ +
Sbjct: 1006 PAEIGQLTSLKTLGLSDNMLTSVPADIGQLTSLKELRLGGNQ-LTSVPEEIGQLTSLQGL 1064

Query: 548  SLDNCPLSQIPSEI 561
             L    L+ +P+ I
Sbjct: 1065 YLWQNRLTSVPAAI 1078



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/394 (32%), Positives = 216/394 (54%), Gaps = 26/394 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++  L+LS + +T++P  + +L    E  L GN+L S+P++IG +T+L   GL+ N LTS
Sbjct: 450 SLTELNLSSNQLTNVPAEIGQLRSRREFGLSGNQLTSVPAEIGQLTSLEEFGLSGNQLTS 509

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  +  L  L  L L  NKL  +P  + +L +L+ LYL  N++ +V  ++  L++L  L
Sbjct: 510 VPAEIGRLTSLERLWLEDNKLTSVPAEIGRLRALEWLYLHGNQLTSVPAEVGQLTSLEKL 569

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            ++ N++  +P E+G+L +L++L+L +N L  +P EIG  T L  L L  NEL ++P  +
Sbjct: 570 DLQHNQLTSVPVEVGQLTSLMSLNLGNNRLTSVPAEIGQLTSLWELWLHDNELTSVPAEI 629

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L +L  L L+ N+L SVP  + +                        LTS+  + L  
Sbjct: 630 WQLTSLRELSLAVNQLTSVPAEIGQ------------------------LTSLKTLELGG 665

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T+ P+    Q TS+ +++ + N++  +P  I  +  +L  + + DN LTS P ++G 
Sbjct: 666 NQLTSVPA-EIGQLTSLETLDLDDNKLTSVPADILQQLTSLESLELGDNHLTSWPEEIGQ 724

Query: 402 WVGLTELNLGTNQI-SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
              L EL L  N++ + +  +I  L +L+ L L  N L  +P+ IG L  L+ L L +N+
Sbjct: 725 LTSLKELTLRGNKLTTSVPAEIGQLTSLKTLDLRCNQLTSVPAEIGQLTSLRWLWLNDNR 784

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
           L S+P E+G L  L+ L L+ NQL  +P  I  L
Sbjct: 785 LTSVPAELGQLTSLEGLWLKGNQLTIVPAEIREL 818



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 134/424 (31%), Positives = 209/424 (49%), Gaps = 61/424 (14%)

Query: 106  LDLSKSSITHLPPSV-EKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT-SLP 163
            LDL  + +T +P  + ++LT LE L L  N L S P +IG +T+L  L L  N LT S+P
Sbjct: 684  LDLDDNKLTSVPADILQQLTSLESLELGDNHLTSWPEEIGQLTSLKELTLRGNKLTTSVP 743

Query: 164  DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
              +  L  L+ LDLR N+L  +P  + +LTSL+ L+L  NR+ +V  ++  L++L  L +
Sbjct: 744  AEIGQLTSLKTLDLRCNQLTSVPAEIGQLTSLRWLWLNDNRLTSVPAELGQLTSLEGLWL 803

Query: 224  RDNKIRELPPELGELK---------NLVTLDLAHNHL------------------EELPK 256
            + N++  +P E+ ELK         + VT+D   +                    +E P+
Sbjct: 804  KGNQLTIVPAEIRELKAAGCRVDLDDGVTMDEGDDARALRTWRAMCPDLQGMWPEDEQPE 863

Query: 257  EIGNCTM-----LVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
            +    TM     +V L+L+   L   +P  LG L  L  L L  N++ S+P  + +   L
Sbjct: 864  DWYRVTMENDGRVVQLELEVFGLTGAVPAELGRLSALRWLSLHGNQVTSLPAEIGQLTSL 923

Query: 311  NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK 370
                +    L+S+P   +  LTS+  + L  N+ T+ P+    Q T++  +    NQ+  
Sbjct: 924  EVLYLTENQLTSVP-AEIGQLTSLRELYLYENQLTSVPAE-IGQLTALARLELRDNQLTS 981

Query: 371  IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
            +P  I   A  L K+++  N LTS+P ++G                        L +L+ 
Sbjct: 982  LPAEIGQLAA-LEKLSLDSNQLTSVPAEIG-----------------------QLTSLKT 1017

Query: 431  LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA 490
            L LS+N+L  +P+ IG L  LK L L  N+L S+P EIG L  LQ L L  N+L S+P A
Sbjct: 1018 LGLSDNMLTSVPADIGQLTSLKELRLGGNQLTSVPEEIGQLTSLQGLYLWQNRLTSVPAA 1077

Query: 491  IGHL 494
            I  L
Sbjct: 1078 IREL 1081



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/279 (34%), Positives = 150/279 (53%), Gaps = 15/279 (5%)

Query: 57   CGVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKE----FLRCKEEN---ILNLDLS 109
            C VD+   VT+   +  +   T +   P    +  E E    + R   EN   ++ L+L 
Sbjct: 823  CRVDLDDGVTMDEGDDARALRTWRAMCPDLQGMWPEDEQPEDWYRVTMENDGRVVQLELE 882

Query: 110  KSSIT-HLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLAN 168
               +T  +P  + +L+ L  L L+GN++ SLP++IG +T+L  L L EN LTS+P  +  
Sbjct: 883  VFGLTGAVPAELGRLSALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQ 942

Query: 169  LQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
            L  LR L L  N+L  +P  + +LT+L  L LR N++ ++  +I  L+ L  LS+  N++
Sbjct: 943  LTSLRELYLYENQLTSVPAEIGQLTALARLELRDNQLTSLPAEIGQLAALEKLSLDSNQL 1002

Query: 229  RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
              +P E+G+L +L TL L+ N L  +P +IG  T L  L L  N+L ++P+ +G L +L 
Sbjct: 1003 TSVPAEIGQLTSLKTLGLSDNMLTSVPADIGQLTSLKELRLGGNQLTSVPEEIGQLTSLQ 1062

Query: 289  RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
             L L  NRL SVP        + E    GC + +L DG+
Sbjct: 1063 GLYLWQNRLTSVP------AAIRELRAVGCYV-NLDDGV 1094


>gi|421099992|ref|ZP_15560634.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796973|gb|EKR99090.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 474

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 166/426 (38%), Positives = 254/426 (59%), Gaps = 3/426 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++L LDL  + +T LP  + KL  L++L L GN++A+LP +IGY+  L  L L+ N L +
Sbjct: 49  DVLILDLIGNQLTTLPKDIGKLQKLQKLDLRGNRIATLPKEIGYLKELQKLDLSNNQLKT 108

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  LQ+  VL L +N    LP  + KL  L+ L L  N++KT+  DI+ L NL +L
Sbjct: 109 LPKDIEQLQKPLVLHLNYNNFTTLPKEIGKLKELQGLELYNNQLKTLPKDIERLQNLQVL 168

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++ +N+++ LP ++G+L+NL  L L +N L  L KEIG    L  LDL +N+L  +P  +
Sbjct: 169 NLTNNQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLDLTNNQLTTLPKDI 228

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G+L  L  L LS+N+L ++P+ + K  +L   ++ G  L++LP   +  L  +  + L  
Sbjct: 229 GHLKELQDLDLSHNKLTALPKDIGKLQNLQVLDLSGNQLTTLPKD-IGYLKELQVLHLED 287

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+FT  P     Q  ++  +   +NQ+  +P  I  + +NL  + +  N LT+LP ++G 
Sbjct: 288 NQFTTLPK-EIGQLQNLRVLYLYNNQLTILPKEI-GKLQNLQVLYLHSNQLTTLPKEIGH 345

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
             GL EL L  NQ++ L ++I  L NL+VL L +N L  LP  IG L+ L  L L  N+L
Sbjct: 346 LKGLQELYLSNNQLTTLPKEIGELQNLQVLYLHSNQLTTLPKEIGQLQNLPVLYLSYNQL 405

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            SLP +IG L+ LQ+L L +NQL +LP  IG L NL  L +  N L+++P+EIG L+ L 
Sbjct: 406 TSLPKDIGKLQNLQKLDLSNNQLTTLPNEIGKLQNLQELYLSNNKLKTLPDEIGKLQKLR 465

Query: 522 TLYLND 527
           TL L+D
Sbjct: 466 TLDLDD 471



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 159/416 (38%), Positives = 235/416 (56%), Gaps = 6/416 (1%)

Query: 147 TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK 206
           T++  L L  N LT+LP  +  LQ+L+ LDLR N++  LP  +  L  L+ L L  N++K
Sbjct: 48  TDVLILDLIGNQLTTLPKDIGKLQKLQKLDLRGNRIATLPKEIGYLKELQKLDLSNNQLK 107

Query: 207 TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
           T+  DI+ L    +L +  N    LP E+G+LK L  L+L +N L+ LPK+I     L  
Sbjct: 108 TLPKDIEQLQKPLVLHLNYNNFTTLPKEIGKLKELQGLELYNNQLKTLPKDIERLQNLQV 167

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           L+L +N+L  +P  +G L NL  LRL  N+L  + + + K  +L   ++    L++LP  
Sbjct: 168 LNLTNNQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLDLTNNQLTTLPKD 227

Query: 327 LLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
           +   L  + ++ LS NK TA P   G  Q   V  ++   NQ+  +P  I    K L  +
Sbjct: 228 I-GHLKELQDLDLSHNKLTALPKDIGKLQNLQV--LDLSGNQLTTLPKDI-GYLKELQVL 283

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           +++DN  T+LP ++G    L  L L  NQ++ L ++I  L NL+VL L +N L  LP  I
Sbjct: 284 HLEDNQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEIGKLQNLQVLYLHSNQLTTLPKEI 343

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
           G+L+ L+ L L  N+L +LP EIG L+ LQ L L SNQL +LP+ IG L NL  L +  N
Sbjct: 344 GHLKGLQELYLSNNQLTTLPKEIGELQNLQVLYLHSNQLTTLPKEIGQLQNLPVLYLSYN 403

Query: 506 NLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L S+P++IG L+NL  L L++N  L  +P E+    NLQ + L N  L  +P EI
Sbjct: 404 QLTSLPKDIGKLQNLQKLDLSNNQ-LTTLPNEIGKLQNLQELYLSNNKLKTLPDEI 458



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 124/358 (34%), Positives = 188/358 (52%), Gaps = 49/358 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L+ + +  LP  + KL +L+ L L  NKL  L  +IG + NL  L L  N LT
Sbjct: 163 QNLQVLNLTNNQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLDLTNNQLT 222

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  + +L++L+ LDL HNKL  LP  + KL +L++L L  N++ T+  DI YL  L +
Sbjct: 223 TLPKDIGHLKELQDLDLSHNKLTALPKDIGKLQNLQVLDLSGNQLTTLPKDIGYLKELQV 282

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN+   LP E+G+L+NL  L L +N L  LPKEIG    L  L L  N+L  +P  
Sbjct: 283 LHLEDNQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEIGKLQNLQVLYLHSNQLTTLPKE 342

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G+L  L  L LS N+L ++P+ + +  +L    +    L++LP   +  L ++  + LS
Sbjct: 343 IGHLKGLQELYLSNNQLTTLPKEIGELQNLQVLYLHSNQLTTLPKE-IGQLQNLPVLYLS 401

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T+ P                             + +NL K+++ +N LT+LP    
Sbjct: 402 YNQLTSLPKD-------------------------IGKLQNLQKLDLSNNQLTTLP---- 432

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
                       N+I KL        NL+ L LSNN LK LP  IG L+KL+ LDL++
Sbjct: 433 ------------NEIGKLQ-------NLQELYLSNNKLKTLPDEIGKLQKLRTLDLDD 471



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 94/251 (37%), Positives = 145/251 (57%), Gaps = 1/251 (0%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  LDL+ + +T LP  +  L  L++L L  NKL +LP  IG + NL  L L+ N 
Sbjct: 207 KLQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSHNKLTALPKDIGKLQNLQVLDLSGNQ 266

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP  +  L++L+VL L  N+   LP  + +L +L++LYL  N++  +  +I  L NL
Sbjct: 267 LTTLPKDIGYLKELQVLHLEDNQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEIGKLQNL 326

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            +L +  N++  LP E+G LK L  L L++N L  LPKEIG    L  L L  N+L  +P
Sbjct: 327 QVLYLHSNQLTTLPKEIGHLKGLQELYLSNNQLTTLPKEIGELQNLQVLYLHSNQLTTLP 386

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L NL  L LSYN+L S+P+ + K  +L + ++    L++LP+  +  L ++  + 
Sbjct: 387 KEIGQLQNLPVLYLSYNQLTSLPKDIGKLQNLQKLDLSNNQLTTLPNE-IGKLQNLQELY 445

Query: 339 LSRNKFTAYPS 349
           LS NK    P 
Sbjct: 446 LSNNKLKTLPD 456


>gi|456875041|gb|EMF90275.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 528

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 169/453 (37%), Positives = 257/453 (56%), Gaps = 27/453 (5%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L  + +T LP  V KL +LEEL L  N+L +LP +IG + NL  L L +N LT
Sbjct: 79  QNLKILGLGSNQLTTLPKEVGKLQNLEELDLGQNQLTTLPEEIGKLQNLQKLNLNQNQLT 138

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  + NLQ+L+ L L  N+   LP  + KL  L+ L L  N++ T+  +I+ L  L  
Sbjct: 139 TLPKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQE 198

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G L+ L TL+L HN L  LPKEIG    L TL+L HN+L  +P  
Sbjct: 199 LDLGINQLTTLPKEIGNLQKLQTLNLNHNQLTNLPKEIGKLQKLQTLNLNHNQLTTLPKE 258

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +GNL NL +L L  N+L ++P+ + K   L E ++    L+S+P+  + +L ++  ++L 
Sbjct: 259 IGNLQNLQQLYLYSNQLTTLPKEIEKLQKLQELHLSDNQLTSVPEE-IGNLQNLQKLSLH 317

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                               + L ++++  N LT LP ++G
Sbjct: 318 SNQLTIIPKE-------------------------IGNLQKLEELDLGQNQLTILPKEIG 352

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+LG N+++ L ++I  L N + L L+ N L  LP  IGNL+KLK L L  N 
Sbjct: 353 NLQKLQTLDLGNNKLTALPKEIGKLQNPQTLYLNRNQLTTLPKEIGNLQKLKWLYLAHNN 412

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L ++P EIG L+ LQ L L SN+L +LP+ IG+L NL  L++ +N L ++P+EIG L NL
Sbjct: 413 LATIPQEIGSLQSLQVLTLNSNRLTTLPKEIGNLQNLQGLNLDKNQLTTLPKEIGKLRNL 472

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
            +L L++N  L + P E+    +L+ + L+N P
Sbjct: 473 ESLDLSENP-LTSFPEEIGKLQHLKWLRLENIP 504



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 164/468 (35%), Positives = 254/468 (54%), Gaps = 30/468 (6%)

Query: 109 SKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLAN 168
           S + +T LP  +E L +L+ L L  N+L +LP ++G + NL  L L +N LT+LP+ +  
Sbjct: 64  SNNQLTTLPKEIENLQNLKILGLGSNQLTTLPKEVGKLQNLEELDLGQNQLTTLPEEIGK 123

Query: 169 LQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           LQ L+ L+L  N+L  LP  +  L  L+ LYL  N+  T+   I  L  L  L +  N++
Sbjct: 124 LQNLQKLNLNQNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQL 183

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LP E+ +L+ L  LDL  N L  LPKEIGN   L TL+L HN+L N+P  +G L  L 
Sbjct: 184 TTLPKEIEKLQKLQELDLGINQLTTLPKEIGNLQKLQTLNLNHNQLTNLPKEIGKLQKLQ 243

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L++N+L ++P+ +    +L +  +    L++LP  +   L  +  + LS N+ T+ P
Sbjct: 244 TLNLNHNQLTTLPKEIGNLQNLQQLYLYSNQLTTLPKEI-EKLQKLQELHLSDNQLTSVP 302

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                          +NL K+++  N LT +P ++G    L EL
Sbjct: 303 EE-------------------------IGNLQNLQKLSLHSNQLTIIPKEIGNLQKLEEL 337

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           +LG NQ++ L ++I NL  L+ L L NN L  LP  IG L+  + L L  N+L +LP EI
Sbjct: 338 DLGQNQLTILPKEIGNLQKLQTLDLGNNKLTALPKEIGKLQNPQTLYLNRNQLTTLPKEI 397

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G L++L+ L L  N L ++P+ IG L +L  L++  N L ++P+EIG L+NL  L L+ N
Sbjct: 398 GNLQKLKWLYLAHNNLATIPQEIGSLQSLQVLTLNSNRLTTLPKEIGNLQNLQGLNLDKN 457

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
             L  +P E+    NL+ + L   PL+  P EI   G    +++L+++
Sbjct: 458 Q-LTTLPKEIGKLRNLESLDLSENPLTSFPEEI---GKLQHLKWLRLE 501



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 154/429 (35%), Positives = 233/429 (54%), Gaps = 26/429 (6%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  LDL ++ +T LP  + KL +L++L L  N+L +LP +IG +  L  L L +N 
Sbjct: 100 KLQNLEELDLGQNQLTTLPEEIGKLQNLQKLNLNQNQLTTLPKEIGNLQKLQELYLGDNQ 159

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
             +LP ++  LQ+L+ LDL  N+L  LP  + KL  L+ L L  N++ T+  +I  L  L
Sbjct: 160 FATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQELDLGINQLTTLPKEIGNLQKL 219

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++  N++  LP E+G+L+ L TL+L HN L  LPKEIGN   L  L L  N+L  +P
Sbjct: 220 QTLNLNHNQLTNLPKEIGKLQKLQTLNLNHNQLTTLPKEIGNLQNLQQLYLYSNQLTTLP 279

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +  L  L  L LS N+L SVPE +    +L + ++    L+ +P   + +L  +  + 
Sbjct: 280 KEIEKLQKLQELHLSDNQLTSVPEEIGNLQNLQKLSLHSNQLTIIPKE-IGNLQKLEELD 338

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           L +N+ T  P                               + L  +++ +N LT+LP +
Sbjct: 339 LGQNQLTILPKE-------------------------IGNLQKLQTLDLGNNKLTALPKE 373

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G       L L  NQ++ L ++I NL  L+ L L++N L  +P  IG+L+ L+ L L  
Sbjct: 374 IGKLQNPQTLYLNRNQLTTLPKEIGNLQKLKWLYLAHNNLATIPQEIGSLQSLQVLTLNS 433

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L +LP EIG L+ LQ L L  NQL +LP+ IG L NL  L + EN L S PEEIG L+
Sbjct: 434 NRLTTLPKEIGNLQNLQGLNLDKNQLTTLPKEIGKLRNLESLDLSENPLTSFPEEIGKLQ 493

Query: 519 NLHTLYLND 527
           +L  L L +
Sbjct: 494 HLKWLRLEN 502


>gi|45656721|ref|YP_000807.1| lipoprotein [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|421102937|ref|ZP_15563539.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599957|gb|AAS69444.1| putative lipoprotein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|410367252|gb|EKP22638.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
          Length = 521

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 170/450 (37%), Positives = 259/450 (57%), Gaps = 4/450 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS+  +T LP  +++L +L+ L L  N+L +LP +IG + NL  L L+ NSLT+LP  
Sbjct: 53  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L+L   KL  LP  + +L +L+ L L FN + T+  ++  L NL  L++  
Sbjct: 113 VGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNS 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
            K+  LP E+G+L+NL  LDL+ N L  LPKE+G    L  L+L   +L  +P  +G L 
Sbjct: 173 QKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLR 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L LS+N L ++P+ + +  +L   ++    L++LP   +  L ++  + L+ NK T
Sbjct: 233 NLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPME-IGQLKNLQELDLNSNKLT 291

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++  ++   NQ+  +P  I  + +NL  +N+    LT+LP ++G    L
Sbjct: 292 TLPK-EIRQLRNLQELDLHRNQLTTLPKEI-GQLQNLKTLNLIVTQLTTLPKEIGELQNL 349

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             LNL  NQ++ L ++I  L NLE+LVL  N +  LP  IG L+ L+ LDL +N+L +LP
Sbjct: 350 KTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTLP 409

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            EIG L+ LQ L L  NQL +LP+ I  L NL  L +  N L ++P+EIG L+NL  L L
Sbjct: 410 KEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCL 469

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           ++N  L   P E+    NLQ + L   PLS
Sbjct: 470 DENQ-LTTFPKEIRQLKNLQELHLYLNPLS 498



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 152/414 (36%), Positives = 243/414 (58%), Gaps = 4/414 (0%)

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
           ++  L L+E  LT+LP  +  LQ L++LDL HN+L  LP  + +L +L+ L L FN + T
Sbjct: 49  DVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTT 108

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
           +  ++  L NL  L++   K+  LP E+G+L+NL  LDL+ N L  LPKE+G    L  L
Sbjct: 109 LPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 168

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
           +L   +L  +P  +G L NL  L LS+N L ++P+ + +  +L   N+    L++LP  +
Sbjct: 169 NLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEI 228

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
              L ++  + LS N  T  P     Q  ++  ++   N++  +P  I  + KNL ++++
Sbjct: 229 -GQLRNLQELDLSFNSLTTLPKEV-GQLENLQRLDLHQNRLATLPMEI-GQLKNLQELDL 285

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
             N LT+LP ++     L EL+L  NQ++ L ++I  L NL+ L L    L  LP  IG 
Sbjct: 286 NSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGE 345

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           L+ LK L+L +N+L +LP EIG L+ L+ L+L+ N++ +LP+ IG L NL  L + +N L
Sbjct: 346 LQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQL 405

Query: 508 QSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            ++P+EIG L+NL  L L++N  L  +P E+    NL+++ LDN  L+ +P EI
Sbjct: 406 TTLPKEIGQLQNLQELCLDENQ-LTTLPKEIEQLQNLRVLDLDNNQLTTLPKEI 458



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 163/426 (38%), Positives = 239/426 (56%), Gaps = 30/426 (7%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS +S+T LP  V +L +L+ L L   KL +LP +IG + NL  L L+ NSLT+
Sbjct: 95  NLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTT 154

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L+ L+ L+L   KL  LP  + +L +L+ L L FN + T+  ++  L NL  L
Sbjct: 155 LPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 214

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++   K+  LP E+G+L+NL  LDL+ N L  LPKE+G    L  LDL  N L  +P  +
Sbjct: 215 NLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEI 274

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITL 339
           G L NL  L L+ N+L ++P+ + +  +L E ++    L++LP   G L +L ++N I  
Sbjct: 275 GQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIV- 333

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
                        TQ T+             +P  I    +NL  +N+ DN LT+LP ++
Sbjct: 334 -------------TQLTT-------------LPKEI-GELQNLKTLNLLDNQLTTLPKEI 366

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G    L  L L  N+I+ L ++I  L NL+ L L  N L  LP  IG L+ L+ L L+EN
Sbjct: 367 GELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN 426

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L +LP EI  L+ L+ L L +NQL +LP+ IG L NL  L + EN L + P+EI  L+N
Sbjct: 427 QLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKN 486

Query: 520 LHTLYL 525
           L  L+L
Sbjct: 487 LQELHL 492



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 148/421 (35%), Positives = 234/421 (55%), Gaps = 8/421 (1%)

Query: 145 YVTNLTCLGLAEN----SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           ++ NL+C   AE     +   L  +L N   +RVL L   KL  LP  + +L +LK+L L
Sbjct: 19  FLINLSCKIQAEEVEPEAYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDL 78

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
             N++  +  +I  L NL  L +  N +  LP E+G+L+NL  L+L    L  LPKEIG 
Sbjct: 79  GHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQ 138

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  LDL  N L  +P  +G L NL RL L+  +L ++P+ + +  +L E ++   +L
Sbjct: 139 LRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSL 198

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
           ++LP   +  L ++  + L+  K T  P     Q  ++  ++   N +  +P  +  + +
Sbjct: 199 TTLPKE-VGQLENLQRLNLNSQKLTTLPK-EIGQLRNLQELDLSFNSLTTLPKEV-GQLE 255

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           NL ++++  N L +LP+++G    L EL+L +N+++ L ++I+ L NL+ L L  N L  
Sbjct: 256 NLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTT 315

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           LP  IG L+ LK L+L   +L +LP EIG L+ L+ L L  NQL +LP+ IG L NL  L
Sbjct: 316 LPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEIL 375

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
            + EN + ++P+EIG L+NL  L L+ N  L  +P E+    NLQ + LD   L+ +P E
Sbjct: 376 VLRENRITALPKEIGQLQNLQRLDLHQNQ-LTTLPKEIGQLQNLQELCLDENQLTTLPKE 434

Query: 561 I 561
           I
Sbjct: 435 I 435



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/222 (39%), Positives = 130/222 (58%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL+ + +T LP  + +L +L+EL L+ N+L +LP +IG + NL  L L    LT
Sbjct: 278 KNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLT 337

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ L+ L+L  N+L  LP  + +L +L+IL LR NRI  +  +I  L NL  
Sbjct: 338 TLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQR 397

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+L+NL  L L  N L  LPKEI     L  LDL +N+L  +P  
Sbjct: 398 LDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKE 457

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           +G L NL  L L  N+L + P+ + +  +L E ++    LSS
Sbjct: 458 IGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 499


>gi|418744888|ref|ZP_13301233.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794219|gb|EKR92129.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 481

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 173/436 (39%), Positives = 256/436 (58%), Gaps = 7/436 (1%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            K +N+ +LDLS + +  LP  + KL +L++L L  N+L +LP +IG + NL  L L  N
Sbjct: 32  GKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSN 91

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            LT+L   + NLQ L+ LDL  N+L  LP  ++ L +L+ L L  N++ T+  +I  L N
Sbjct: 92  QLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQN 151

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N++  LP E+G L+NL TLDL  N L  LP+EIGN   L TLDL+ N+L  +
Sbjct: 152 LQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTL 211

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  +G L NL +L L  NRL ++P+ + K  +L E  +    L++LP   +  L ++  +
Sbjct: 212 PKEIGKLQNLKKLYLYNNRLTTLPKEVGKLQNLQELYLYNNRLTTLPKE-IEDLQNLKIL 270

Query: 338 TLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
           +L  N+ T  P   G       +Y  N   N++  +P  I    +NL  +N+  N  T+L
Sbjct: 271 SLGSNQLTTLPKEVGKLQNLQELYLYN---NRLTTLPKEI-GNLQNLQDLNLNSNQFTTL 326

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++     L +L+LG NQ++ L E+I NL NL+ L L  N L  LP  IGNL+ L+ LD
Sbjct: 327 PKEIWNLQKLQKLSLGRNQLTTLPEEIWNLQNLKTLDLEGNQLATLPEEIGNLQNLQKLD 386

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           LE N+L +LP EIG L++L++L L +N+L +LP  IG+L  L  LS+G N L ++P+EIG
Sbjct: 387 LEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPIEIGNLQKLQTLSLGHNQLTTLPKEIG 446

Query: 516 TLENLHTLYLNDNTCL 531
            L+ L  L L  N  L
Sbjct: 447 NLQKLKMLDLGGNPSL 462



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 172/468 (36%), Positives = 260/468 (55%), Gaps = 17/468 (3%)

Query: 109 SKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLAN 168
           S   +  LP  + KL +L +L L  N+L +LP +IG + NL  L L+ N LT+LP  +  
Sbjct: 20  SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQ 79

Query: 169 LQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           LQ L+ L+L  N+L  L   +  L +L+ L L  N++ T+  +I  L NL  L +  N++
Sbjct: 80  LQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQL 139

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LP E+  L+NL TLDL  N L  LP+EIGN   L TLDL+ N+L  +P+ +GNL NL 
Sbjct: 140 TTLPEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQ 199

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L  N+L ++P+ + K  +L +  +    L++LP   +  L ++  + L  N+ T  P
Sbjct: 200 TLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTLPKE-VGKLQNLQELYLYNNRLTTLP 258

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                   ++  ++   NQ+  +P  +  + +NL ++ + +N LT+LP ++G    L +L
Sbjct: 259 K-EIEDLQNLKILSLGSNQLTTLPKEV-GKLQNLQELYLYNNRLTTLPKEIGNLQNLQDL 316

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           NL +NQ + L ++I NL  L+ L L  N L  LP  I NL+ LK LDLE N+L +LP EI
Sbjct: 317 NLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIWNLQNLKTLDLEGNQLATLPEEI 376

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G L+ LQ+L L+ NQL +LP+ IG L  L  L +  N L ++P EIG L+ L TL L  N
Sbjct: 377 GNLQNLQKLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPIEIGNLQKLQTLSLGHN 436

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
             L  +P E+     L+++ L              G PSLI +  K+Q
Sbjct: 437 -QLTTLPKEIGNLQKLKMLDLG-------------GNPSLIDQKEKIQ 470


>gi|255078122|ref|XP_002502641.1| predicted protein [Micromonas sp. RCC299]
 gi|226517906|gb|ACO63899.1| predicted protein [Micromonas sp. RCC299]
          Length = 505

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 165/456 (36%), Positives = 260/456 (57%), Gaps = 4/456 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL  S +T +P  + +LT LE+L LY N+L  +P++IG +  L  L L  + LTS+P  
Sbjct: 32  LDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERLRLGGSKLTSVPAE 91

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L  L+L  N+L  +P  + +LTSL+ L L  N++  V  +I  L+ L  L++  
Sbjct: 92  IGQLTSLVELNLGGNRLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERLNLDG 151

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  +P E+G+L +L  LDL  N L  LP EI   T L  L LQ N+L ++P  +G L 
Sbjct: 152 NQLTSVPAEIGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQGNQLTSVPAEIGQLA 211

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L  L L  N+L SVP  + +   L +  ++   L+S+P   +  LTS+  + LS N+ T
Sbjct: 212 SLKGLDLYNNQLTSVPAEIGQLASLEKLRLDNNQLASVP-AEIGRLTSLTEVDLSFNRLT 270

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P+    Q TS+  ++   N++ ++P  I   A +L ++ + +N LTS+P ++G    L
Sbjct: 271 SVPA-EIGQLTSLTELHLHINKLTRVPAEIGQLA-SLVRLRLDNNQLTSVPAEIGQLTSL 328

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L LG NQ++ +  +I  L +LE L+L  N L  +P+ IG L  L+ L L  N L S+P
Sbjct: 329 EWLGLGGNQLTSVPAEIGQLASLERLLLYGNQLTSVPAEIGQLTSLEWLGLNGNILTSVP 388

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            EIG L  L+ L L  N+L S+P  IG LT+L  L +G+N L  +P EIG L +L  L L
Sbjct: 389 AEIGQLTSLKELYLHGNELTSVPAEIGQLTSLQRLYLGDNQLTRVPAEIGQLTSLTVLGL 448

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N N  L+++P E+   ++++ + L    L+ +P+ I
Sbjct: 449 NSNQ-LSSLPAEIGQLTSVERLDLRCNELTSVPAAI 483



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 160/456 (35%), Positives = 253/456 (55%), Gaps = 27/456 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L       +P  + +L+ L EL LY ++L S+P++IG +T+L  L L  N LT +P  
Sbjct: 9   LGLGSWGPCAVPAEIGRLSALRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIVPAE 68

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L  L L  +KL  +P  + +LTSL  L L  NR+ +V                 
Sbjct: 69  IGQLALLERLRLGGSKLTSVPAEIGQLTSLVELNLGGNRLTSV----------------- 111

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
                 P E+G+L +L  L+L  N L  +P EIG   +L  L+L  N+L ++P  +G L 
Sbjct: 112 ------PAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERLNLDGNQLTSVPAEIGQLT 165

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +LT L L  N+L S+P  + +   L   +++G  L+S+P   +  L S+  + L  N+ T
Sbjct: 166 SLTELDLGRNKLTSLPTEIWQLTSLTCLHLQGNQLTSVP-AEIGQLASLKGLDLYNNQLT 224

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P+    Q  S+  +  ++NQ+  +P  I  R  +L++V++  N LTS+P ++G    L
Sbjct: 225 SVPA-EIGQLASLEKLRLDNNQLASVPAEI-GRLTSLTEVDLSFNRLTSVPAEIGQLTSL 282

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
           TEL+L  N+++++  +I  L +L  L L NN L  +P+ IG L  L+ L L  N+L S+P
Sbjct: 283 TELHLHINKLTRVPAEIGQLASLVRLRLDNNQLTSVPAEIGQLTSLEWLGLGGNQLTSVP 342

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            EIG L  L+RL+L  NQL S+P  IG LT+L +L +  N L S+P EIG L +L  LYL
Sbjct: 343 AEIGQLASLERLLLYGNQLTSVPAEIGQLTSLEWLGLNGNILTSVPAEIGQLTSLKELYL 402

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           + N  L ++P E+   ++LQ + L +  L+++P+EI
Sbjct: 403 HGNE-LTSVPAEIGQLTSLQRLYLGDNQLTRVPAEI 437



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/393 (35%), Positives = 224/393 (56%), Gaps = 3/393 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           +++ L+L  + +T +P  + +LT LE+L LY N+L  +P++IG +  L  L L  N LTS
Sbjct: 97  SLVELNLGGNRLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERLNLDGNQLTS 156

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  +  L  L  LDL  NKL  LP  +++LTSL  L+L+ N++ +V  +I  L++L  L
Sbjct: 157 VPAEIGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQGNQLTSVPAEIGQLASLKGL 216

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + +N++  +P E+G+L +L  L L +N L  +P EIG  T L  +DL  N L ++P  +
Sbjct: 217 DLYNNQLTSVPAEIGQLASLEKLRLDNNQLASVPAEIGRLTSLTEVDLSFNRLTSVPAEI 276

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L +LT L L  N+L  VP  + +   L    ++   L+S+P   +  LTS+  + L  
Sbjct: 277 GQLTSLTELHLHINKLTRVPAEIGQLASLVRLRLDNNQLTSVP-AEIGQLTSLEWLGLGG 335

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T+ P+    Q  S+  +    NQ+  +P  I  +  +L  + +  N+LTS+P ++G 
Sbjct: 336 NQLTSVPA-EIGQLASLERLLLYGNQLTSVPAEI-GQLTSLEWLGLNGNILTSVPAEIGQ 393

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L EL L  N+++ +  +I  L +L+ L L +N L ++P+ IG L  L  L L  N+L
Sbjct: 394 LTSLKELYLHGNELTSVPAEIGQLTSLQRLYLGDNQLTRVPAEIGQLTSLTVLGLNSNQL 453

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
            SLP EIG L  ++RL L+ N+L S+P AI  L
Sbjct: 454 SSLPAEIGQLTSVERLDLRCNELTSVPAAIREL 486



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 78/134 (58%), Gaps = 1/134 (0%)

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           +EVL L +     +P+ IG L  L+ LDL  ++L S+P EIG L  L++L L  NQL  +
Sbjct: 6   VEVLGLGSWGPCAVPAEIGRLSALRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIV 65

Query: 488 PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIM 547
           P  IG L  L  L +G + L S+P EIG L +L  L L  N  L ++P E+   ++L+ +
Sbjct: 66  PAEIGQLALLERLRLGGSKLTSVPAEIGQLTSLVELNLGGNR-LTSVPAEIGQLTSLEKL 124

Query: 548 SLDNCPLSQIPSEI 561
           +L    L+ +P+EI
Sbjct: 125 NLYCNQLTIVPAEI 138



 Score = 42.0 bits (97), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 41/65 (63%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L  + +T +P  + +LT L  L L  N+L+SLP++IG +T++  L L  N LTS+P +
Sbjct: 423 LYLGDNQLTRVPAEIGQLTSLTVLGLNSNQLSSLPAEIGQLTSVERLDLRCNELTSVPAA 482

Query: 166 LANLQ 170
           +  L+
Sbjct: 483 IRELR 487


>gi|254424572|ref|ZP_05038290.1| Miro-like protein [Synechococcus sp. PCC 7335]
 gi|196192061|gb|EDX87025.1| Miro-like protein [Synechococcus sp. PCC 7335]
          Length = 1260

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 161/454 (35%), Positives = 267/454 (58%), Gaps = 4/454 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +++ +LDLS + ++ LP  V +L  L  L L  N+L++LP  +G + +LT L L+ N L+
Sbjct: 185 QSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLSFNQLSTLPEVVGQLQSLTSLNLSSNQLS 244

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L  LDL  N+L+ LP VV +L SL  LYLR N++ T+   +  L +L+ 
Sbjct: 245 TLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTS 304

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP  +G+L++L +L+L  N L  LP+ +G    L +L L  N+L  +P+ 
Sbjct: 305 LDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEVVGQLQSLTSLYLSSNQLSTLPEA 364

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L +LT L LS N+L ++PE + +   L   ++    LS+LP+ ++  L S+ ++ L 
Sbjct: 365 VGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPE-VVGQLQSLTSLYLR 423

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ +  P     Q  S+ S++   NQ+  +P  +  + ++L+ +N++ N L++LP  +G
Sbjct: 424 SNQLSTLPE-AVGQLQSLTSLDLSSNQLSTLP-EVVGQLQSLTSLNLRSNQLSTLPEAVG 481

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               LT L+L +NQ+S L E +  L +L  L L +N L  LP  +G L+ L  LDL  N+
Sbjct: 482 QLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLRSNQLSTLPEVVGQLQSLTSLDLSSNQ 541

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L +LP  +G L+ L  L L+SNQL +LP  IG L +L+ L + +N L  +P +I  L+ L
Sbjct: 542 LSTLPEVVGQLQSLTSLYLRSNQLSTLPEVIGQLQSLTSLDLSDNQLSELPRQICQLDTL 601

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
            +L+L  N  L  +P EL+   +L+ +SL +  L
Sbjct: 602 CSLFLGGN-FLEQLPAELSRLLHLEKLSLGSASL 634



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 174/508 (34%), Positives = 280/508 (55%), Gaps = 41/508 (8%)

Query: 92  EKEFLRCKEENILN----LDLSKSSITHLPPSVEKLTHLEELYL---------YGNKLAS 138
           + E LR  +E   +    LDL+   I  LPP + KLT L+ L L          GN L +
Sbjct: 3   KDELLRLIDEAAADGRSTLDLAGMGIDELPPEIGKLTKLKTLVLGLWDKQRRRRGNNLQT 62

Query: 139 LPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL 198
           LP +IG +T L  L LA N    +P+ +  L++LR L+L  N+L+ LP VV +L SL  L
Sbjct: 63  LPDEIGRLTELRSLFLAYNQFEEIPEVVGRLRKLRSLNLSSNQLSTLPEVVGQLQSLTSL 122

Query: 199 YLRFNRIKTVH----------------------PDIQYLSNLSMLSMRDNKIRELPPELG 236
           YLR N++ T+                       P++    +L+ L++R N++  LP  +G
Sbjct: 123 YLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQQSLTSLNLRSNQLSTLPEVVG 182

Query: 237 ELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNR 296
           +L++L +LDL+ N L  LP+ +G    L +LDL  N+L  +P+++G L +LT L LS N+
Sbjct: 183 QLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLSFNQLSTLPEVVGQLQSLTSLNLSSNQ 242

Query: 297 LESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFT 356
           L ++PE + +   L   ++    LS+LP+ ++  L S+ ++ L  N+ +  P     Q  
Sbjct: 243 LSTLPEVVGQLQSLTSLDLSSNQLSTLPE-VVGQLQSLTSLYLRSNQLSTLPE-AVGQLQ 300

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS 416
           S+ S++   NQ+  +P  +  + ++L+ +N++ N L++LP  +G    LT L L +NQ+S
Sbjct: 301 SLTSLDLSSNQLSTLP-EVVGQLQSLTSLNLRSNQLSTLPEVVGQLQSLTSLYLSSNQLS 359

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
            L E +  L +L  L LS+N L  LP  +G L+ L  LDL  N+L +LP  +G L+ L  
Sbjct: 360 TLPEAVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTS 419

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
           L L+SNQL +LP A+G L +L+ L +  N L ++PE +G L++L +L L  N  L+ +P 
Sbjct: 420 LYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQ-LSTLPE 478

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEIVVG 564
            +    +L  + L +  LS +P   VVG
Sbjct: 479 AVGQLQSLTSLDLSSNQLSTLPE--VVG 504



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 167/464 (35%), Positives = 275/464 (59%), Gaps = 8/464 (1%)

Query: 100 EENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL 159
           ++++ +L+L  + ++ LP  V +L  L  L L  N+L++LP  +G + +LT L L+ N L
Sbjct: 161 QQSLTSLNLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLSFNQL 220

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           ++LP+ +  LQ L  L+L  N+L+ LP VV +L SL  L L  N++ T+   +  L +L+
Sbjct: 221 STLPEVVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLT 280

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L +R N++  LP  +G+L++L +LDL+ N L  LP+ +G    L +L+L+ N+L  +P+
Sbjct: 281 SLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPE 340

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNI 337
           ++G L +LT L LS N+L ++PE + +   L   N+    LS+LP+  G L SLTS++  
Sbjct: 341 VVGQLQSLTSLYLSSNQLSTLPEAVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLD-- 398

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            LS N+ +  P     Q  S+ S+    NQ+  +P  +  + ++L+ +++  N L++LP 
Sbjct: 399 -LSSNQLSTLPE-VVGQLQSLTSLYLRSNQLSTLPEAV-GQLQSLTSLDLSSNQLSTLPE 455

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
            +G    LT LNL +NQ+S L E +  L +L  L LS+N L  LP  +G L+ L  LDL 
Sbjct: 456 VVGQLQSLTSLNLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLR 515

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
            N+L +LP  +G L+ L  L L SNQL +LP  +G L +L+ L +  N L ++PE IG L
Sbjct: 516 SNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEVIGQL 575

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           ++L +L L+DN  L+ +P ++     L  + L    L Q+P+E+
Sbjct: 576 QSLTSLDLSDNQ-LSELPRQICQLDTLCSLFLGGNFLEQLPAEL 618



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 164/463 (35%), Positives = 270/463 (58%), Gaps = 9/463 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +++ +LDLS + ++ LP  V +   L  L L  N+L++LP  +G + +LT L L+ N L+
Sbjct: 140 QSLTSLDLSSNQLSTLPEVVGQ-QSLTSLNLRSNQLSTLPEVVGQLQSLTSLDLSSNQLS 198

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L  LDL  N+L+ LP VV +L SL  L L  N++ T+   +  L +L+ 
Sbjct: 199 TLPEVVGQLQSLTSLDLSFNQLSTLPEVVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTS 258

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP  +G+L++L +L L  N L  LP+ +G    L +LDL  N+L  +P++
Sbjct: 259 LDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEV 318

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNIT 338
           +G L +LT L L  N+L ++PE + +   L    +    LS+LP+  G L SLTS+N   
Sbjct: 319 VGQLQSLTSLNLRSNQLSTLPEVVGQLQSLTSLYLSSNQLSTLPEAVGQLQSLTSLN--- 375

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           LS N+ +  P     Q  S+ S++   NQ+  +P  +  + ++L+ + ++ N L++LP  
Sbjct: 376 LSSNQLSTLPE-VVGQLQSLTSLDLSSNQLSTLP-EVVGQLQSLTSLYLRSNQLSTLPEA 433

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    LT L+L +NQ+S L E +  L +L  L L +N L  LP ++G L+ L  LDL  
Sbjct: 434 VGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEAVGQLQSLTSLDLSS 493

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L +LP  +G L+ L  L L+SNQL +LP  +G L +L+ L +  N L ++PE +G L+
Sbjct: 494 NQLSTLPEVVGQLQSLTSLDLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQ 553

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +L +LYL  N  L+ +P  +    +L  + L +  LS++P +I
Sbjct: 554 SLTSLYLRSNQ-LSTLPEVIGQLQSLTSLDLSDNQLSELPRQI 595



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 165/462 (35%), Positives = 265/462 (57%), Gaps = 11/462 (2%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +L L+ +    +P  V +L  L  L L  N+L++LP  +G + +LT L L  N L++LP+
Sbjct: 75  SLFLAYNQFEEIPEVVGRLRKLRSLNLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPE 134

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            +  LQ L  LDL  N+L+ LP VV +  SL  L LR N++ T+   +  L +L+ L + 
Sbjct: 135 VVGQLQSLTSLDLSSNQLSTLPEVVGQ-QSLTSLNLRSNQLSTLPEVVGQLQSLTSLDLS 193

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
            N++  LP  +G+L++L +LDL+ N L  LP+ +G    L +L+L  N+L  +P+++G L
Sbjct: 194 SNQLSTLPEVVGQLQSLTSLDLSFNQLSTLPEVVGQLQSLTSLNLSSNQLSTLPEVVGQL 253

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRN 342
            +LT L LS N+L ++PE + +   L    +    LS+LP+  G L SLTS++   LS N
Sbjct: 254 QSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLD---LSSN 310

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
           + +  P     Q  S+ S+N   NQ+  +P  +  + ++L+ + +  N L++LP  +G  
Sbjct: 311 QLSTLPE-VVGQLQSLTSLNLRSNQLSTLP-EVVGQLQSLTSLYLSSNQLSTLPEAVGQL 368

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
             LT LNL +NQ+S L E +  L +L  L LS+N L  LP  +G L+ L  L L  N+L 
Sbjct: 369 QSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLS 428

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
           +LP  +G L+ L  L L SNQL +LP  +G L +L+ L++  N L ++PE +G L++L +
Sbjct: 429 TLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEAVGQLQSLTS 488

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVG 564
           L L+ N  L+ +P  +    +L  + L +  LS +P   VVG
Sbjct: 489 LDLSSNQ-LSTLPEVVGQLQSLTSLDLRSNQLSTLPE--VVG 527



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 5/108 (4%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE- 156
           C+ + + +L L  + +  LP  + +L HLE+L L     ASL     Y   L   G ++ 
Sbjct: 596 CQLDTLCSLFLGGNFLEQLPAELSRLLHLEKLSLGS---ASLIFDSYYHNVLRAFGASKQ 652

Query: 157 -NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFN 203
            N LT + D L +L  L VLDL  N+L+ +   +  L  LK + LR N
Sbjct: 653 GNKLTHISDCLFSLPSLEVLDLSFNQLSRVDSKIQSLEKLKQIDLRGN 700


>gi|428298451|ref|YP_007136757.1| small GTP-binding protein [Calothrix sp. PCC 6303]
 gi|428234995|gb|AFZ00785.1| small GTP-binding protein [Calothrix sp. PCC 6303]
          Length = 1408

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 155/466 (33%), Positives = 269/466 (57%), Gaps = 5/466 (1%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            K  N+  L +S + IT +P ++  L++L EL++  N++  +P  I  + NL  L ++ N
Sbjct: 169 AKLSNLRELHVSSNQITEIPEAIANLSNLRELHVSSNQITEIPEAIAKLINLRELQVSSN 228

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            +T +P+ +A L  LR L LR+N++ E+P V+ KLT+L  L L +N+I  +   +  L N
Sbjct: 229 KITEIPEVIAKLTNLRKLYLRNNQITEIPEVIAKLTNLTQLDLSYNQITKISEALAKLIN 288

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L+ + + +NKI E+P  L +L NL  LDL++N + ++P+ +   T L  L L  N++  I
Sbjct: 289 LTQIILHNNKITEIPDALAKLINLTQLDLSYNQITKIPEALAKLTNLTQLILYSNQITEI 348

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P+++  L NLT+L LSYN++  +PE L+K  +L +  +    +S +P+  L+ L ++  I
Sbjct: 349 PEVIAKLTNLTQLDLSYNQITKIPEALAKLTNLTQLILYSNRISEIPEA-LAKLINLTQI 407

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            LS N+ +  P     + T++  ++  +NQI KIP  + ++  NL+++ +  N +T +P 
Sbjct: 408 ILSYNRISEIPE-ALAKLTNLTQLDLSYNQITKIPEAL-AKLINLTQIILHSNKITEIPE 465

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
            L     L +L L  N+I+++ E +  L NL  L LS+N + K+P ++  L  L  LDL 
Sbjct: 466 ALAKLTNLRQLYLSYNRITEIPEALAKLTNLTQLNLSDNQIIKIPKALAKLSNLTQLDLN 525

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN-NLQSIPEEIGT 516
            NK+  +P  +  L  L +L L++N++  +P A+  LTNL+ L +G N N+  IPE I  
Sbjct: 526 RNKITEIPEALAKLTNLTQLYLRNNRITEIPEALAKLTNLTQLDLGTNYNISEIPEAITK 585

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           L NL  L L  ++ +  IP  +A  +NL  ++L +  +++IP  I 
Sbjct: 586 LTNLTQLNLT-SSQITEIPEVIAKLTNLTQLNLTSNQIAEIPEAIA 630



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 147/461 (31%), Positives = 267/461 (57%), Gaps = 5/461 (1%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L  + + I+ +P  + KL++L EL++  NK+  +P  I  ++NL  L ++ N +T 
Sbjct: 127 NLTQLYFNSNHISKIPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSNQITE 186

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P+++ANL  LR L +  N++ E+P  + KL +L+ L +  N+I  +   I  L+NL  L
Sbjct: 187 IPEAIANLSNLRELHVSSNQITEIPEAIAKLINLRELQVSSNKITEIPEVIAKLTNLRKL 246

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +R+N+I E+P  + +L NL  LDL++N + ++ + +     L  + L +N++  IPD L
Sbjct: 247 YLRNNQITEIPEVIAKLTNLTQLDLSYNQITKISEALAKLINLTQIILHNNKITEIPDAL 306

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             LINLT+L LSYN++  +PE L+K  +L +  +    ++ +P+ +++ LT++  + LS 
Sbjct: 307 AKLINLTQLDLSYNQITKIPEALAKLTNLTQLILYSNQITEIPE-VIAKLTNLTQLDLSY 365

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P     + T++  +    N+I +IP  + ++  NL+++ +  N ++ +P  L  
Sbjct: 366 NQITKIPE-ALAKLTNLTQLILYSNRISEIPEAL-AKLINLTQIILSYNRISEIPEALAK 423

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              LT+L+L  NQI+K+ E +  L+NL  ++L +N + ++P ++  L  L+ L L  N++
Sbjct: 424 LTNLTQLDLSYNQITKIPEALAKLINLTQIILHSNKITEIPEALAKLTNLRQLYLSYNRI 483

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
             +P  +  L  L +L L  NQ++ +P+A+  L+NL+ L +  N +  IPE +  L NL 
Sbjct: 484 TEIPEALAKLTNLTQLNLSDNQIIKIPKALAKLSNLTQLDLNRNKITEIPEALAKLTNLT 543

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLD-NCPLSQIPSEI 561
            LYL +N  +  IP  LA  +NL  + L  N  +S+IP  I
Sbjct: 544 QLYLRNNR-ITEIPEALAKLTNLTQLDLGTNYNISEIPEAI 583



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 151/457 (33%), Positives = 261/457 (57%), Gaps = 4/457 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+S + +  +P  V ++ HLEEL L   +L  +P  I  ++NLT L    N ++ 
Sbjct: 81  NLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPEAIANLSNLTQLYFNSNHISK 140

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P+ +A L  LR L +  NK+ E+P  + KL++L+ L++  N+I  +   I  LSNL  L
Sbjct: 141 IPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSNQITEIPEAIANLSNLREL 200

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N+I E+P  + +L NL  L ++ N + E+P+ I   T L  L L++N++  IP+++
Sbjct: 201 HVSSNQITEIPEAIAKLINLRELQVSSNKITEIPEVIAKLTNLRKLYLRNNQITEIPEVI 260

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NLT+L LSYN++  + E L+K ++L +  +    ++ +PD  L+ L ++  + LS 
Sbjct: 261 AKLTNLTQLDLSYNQITKISEALAKLINLTQIILHNNKITEIPDA-LAKLINLTQLDLSY 319

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P     + T++  +    NQI +IP  + ++  NL+++++  N +T +P  L  
Sbjct: 320 NQITKIPE-ALAKLTNLTQLILYSNQITEIP-EVIAKLTNLTQLDLSYNQITKIPEALAK 377

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              LT+L L +N+IS++ E +  L+NL  ++LS N + ++P ++  L  L  LDL  N++
Sbjct: 378 LTNLTQLILYSNRISEIPEALAKLINLTQIILSYNRISEIPEALAKLTNLTQLDLSYNQI 437

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
             +P  +  L  L ++IL SN++  +P A+  LTNL  L +  N +  IPE +  L NL 
Sbjct: 438 TKIPEALAKLINLTQIILHSNKITEIPEALAKLTNLRQLYLSYNRITEIPEALAKLTNLT 497

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L L+DN  +  IP  LA  SNL  + L+   +++IP
Sbjct: 498 QLNLSDNQII-KIPKALAKLSNLTQLDLNRNKITEIP 533



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 150/438 (34%), Positives = 253/438 (57%), Gaps = 5/438 (1%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS + IT +P ++ KLT+L +L LY N++  +P  I  +TNLT L L+ N +T 
Sbjct: 311 NLTQLDLSYNQITKIPEALAKLTNLTQLILYSNQITEIPEVIAKLTNLTQLDLSYNQITK 370

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P++LA L  L  L L  N+++E+P  + KL +L  + L +NRI  +   +  L+NL+ L
Sbjct: 371 IPEALAKLTNLTQLILYSNRISEIPEALAKLINLTQIILSYNRISEIPEALAKLTNLTQL 430

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N+I ++P  L +L NL  + L  N + E+P+ +   T L  L L +N +  IP+ L
Sbjct: 431 DLSYNQITKIPEALAKLINLTQIILHSNKITEIPEALAKLTNLRQLYLSYNRITEIPEAL 490

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NLT+L LS N++  +P+ L+K  +L + ++    ++ +P+ L + LT++  + L  
Sbjct: 491 AKLTNLTQLNLSDNQIIKIPKALAKLSNLTQLDLNRNKITEIPEAL-AKLTNLTQLYLRN 549

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHN-QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           N+ T  P     + T++  ++   N  I +IP  I ++  NL+++N+  + +T +P  + 
Sbjct: 550 NRITEIPEA-LAKLTNLTQLDLGTNYNISEIPEAI-TKLTNLTQLNLTSSQITEIPEVIA 607

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               LT+LNL +NQI+++ E I  L NL  L+L++N + ++P +I  L  L  L+L  N+
Sbjct: 608 KLTNLTQLNLTSNQIAEIPEAIAKLTNLTQLILTSNQITEIPEAIAKLTNLTQLNLTSNQ 667

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           +  +P  I  L  L +LIL  NQ+  +P AI  LTNL+ L +  N +  IP+ I  L NL
Sbjct: 668 ITKIPEAIAKLTNLTQLILSYNQITEIPEAIAKLTNLTQLILTSNQITEIPDAITKLTNL 727

Query: 521 HTLYLNDNTCLNNIPFEL 538
             L L+ N  ++ IP E+
Sbjct: 728 TQLDLSYNR-ISEIPLEI 744



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/395 (32%), Positives = 221/395 (55%), Gaps = 27/395 (6%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            K  N+  LDLS + IT +P ++ KLT+L +L LY N+++ +P  +  + NLT + L+ N
Sbjct: 353 AKLTNLTQLDLSYNQITKIPEALAKLTNLTQLILYSNRISEIPEALAKLINLTQIILSYN 412

Query: 158 SLTSLPDSLANLQQLRVLDLRHN-----------------------KLNELPMVVYKLTS 194
            ++ +P++LA L  L  LDL +N                       K+ E+P  + KLT+
Sbjct: 413 RISEIPEALAKLTNLTQLDLSYNQITKIPEALAKLINLTQIILHSNKITEIPEALAKLTN 472

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L+ LYL +NRI  +   +  L+NL+ L++ DN+I ++P  L +L NL  LDL  N + E+
Sbjct: 473 LRQLYLSYNRITEIPEALAKLTNLTQLNLSDNQIIKIPKALAKLSNLTQLDLNRNKITEI 532

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN-RLESVPETLSKCVHLNEF 313
           P+ +   T L  L L++N +  IP+ L  L NLT+L L  N  +  +PE ++K  +L + 
Sbjct: 533 PEALAKLTNLTQLYLRNNRITEIPEALAKLTNLTQLDLGTNYNISEIPEAITKLTNLTQL 592

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           N+    ++ +P+ +++ LT++  + L+ N+    P     + T++  +    NQI +IP 
Sbjct: 593 NLTSSQITEIPE-VIAKLTNLTQLNLTSNQIAEIPEA-IAKLTNLTQLILTSNQITEIPE 650

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
            I ++  NL+++N+  N +T +P  +     LT+L L  NQI+++ E I  L NL  L+L
Sbjct: 651 AI-AKLTNLTQLNLTSNQITKIPEAIAKLTNLTQLILSYNQITEIPEAIAKLTNLTQLIL 709

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++N + ++P +I  L  L  LDL  N++  +P EI
Sbjct: 710 TSNQITEIPDAITKLTNLTQLDLSYNRISEIPLEI 744



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 140/234 (59%), Gaps = 1/234 (0%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            K  N+  LDL+++ IT +P ++ KLT+L +LYL  N++  +P  +  +TNLT L L  N
Sbjct: 514 AKLSNLTQLDLNRNKITEIPEALAKLTNLTQLYLRNNRITEIPEALAKLTNLTQLDLGTN 573

Query: 158 -SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
            +++ +P+++  L  L  L+L  +++ E+P V+ KLT+L  L L  N+I  +   I  L+
Sbjct: 574 YNISEIPEAITKLTNLTQLNLTSSQITEIPEVIAKLTNLTQLNLTSNQIAEIPEAIAKLT 633

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           NL+ L +  N+I E+P  + +L NL  L+L  N + ++P+ I   T L  L L +N++  
Sbjct: 634 NLTQLILTSNQITEIPEAIAKLTNLTQLNLTSNQITKIPEAIAKLTNLTQLILSYNQITE 693

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           IP+ +  L NLT+L L+ N++  +P+ ++K  +L + ++    +S +P  +L S
Sbjct: 694 IPEAIAKLTNLTQLILTSNQITEIPDAITKLTNLTQLDLSYNRISEIPLEILDS 747



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 85/143 (59%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            K  N+  L+L+ + I  +P ++ KLT+L +L L  N++  +P  I  +TNLT L L  N
Sbjct: 607 AKLTNLTQLNLTSNQIAEIPEAIAKLTNLTQLILTSNQITEIPEAIAKLTNLTQLNLTSN 666

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            +T +P+++A L  L  L L +N++ E+P  + KLT+L  L L  N+I  +   I  L+N
Sbjct: 667 QITKIPEAIAKLTNLTQLILSYNQITEIPEAIAKLTNLTQLILTSNQITEIPDAITKLTN 726

Query: 218 LSMLSMRDNKIRELPPELGELKN 240
           L+ L +  N+I E+P E+ + K+
Sbjct: 727 LTQLDLSYNRISEIPLEILDSKD 749



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 42/150 (28%)

Query: 454 LDLEENKLESLPNEIGFLKELQRLIL------------------QSNQLVSLPRAIGHLT 495
           LDL   +L  LP EIG L++L+ LIL                    N L +LP  +  L 
Sbjct: 21  LDLSGQELTELPGEIGKLQQLESLILGKKLEGYERVGSRILEKVSGNNLKTLPLELLGLP 80

Query: 496 NLSYLSVGENNLQS-----------------------IPEEIGTLENLHTLYLNDNTCLN 532
           NL  L +  N L+S                       IPE I  L NL  LY N N  ++
Sbjct: 81  NLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPEAIANLSNLTQLYFNSN-HIS 139

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
            IP  +A  SNL+ + + +  +++IP  I 
Sbjct: 140 KIPELIAKLSNLRELHVSSNKITEIPEAIA 169


>gi|358331524|dbj|GAA50326.1| leucine-rich repeat protein soc-2 homolog [Clonorchis sinensis]
          Length = 451

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 153/403 (37%), Positives = 236/403 (58%), Gaps = 4/403 (0%)

Query: 175 LDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE-LP 232
           LDLRHN+L+  LP V+  L  L+ L L +N++  +   +  L  L +L ++ N ++  LP
Sbjct: 10  LDLRHNRLDGALPSVILGLHCLQQLLLTYNKLNDIS-GVGTLKELQILVIKSNNLQGPLP 68

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            +LG+L  L  LD ++N +  +P  I +CT L+ L L +N +  +P  +G+L  L +L +
Sbjct: 69  DDLGQLTKLQILDCSNNRITTVPDAIASCTKLMRLLLDYNCIGELPSSIGSLKELQQLGI 128

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
            YNRL  +P  L++C  L E NVEG  +  LPD LL  + S+ + TLSRN F+ +P+G  
Sbjct: 129 KYNRLTRLPTELAQCQQLTELNVEGNQIVRLPDDLLCKMPSLRSATLSRNAFSGFPTGAI 188

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
            Q   +  ++ ++N +D +    F  A  L  +++ +N +  L +    W  L +L+L  
Sbjct: 189 GQLVHLEHLSMDYNNLDTVSTKDFVDADRLRSLSLGNNNIVHLEIAASQWRQLVQLDLSY 248

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N+I+KL ED   L NLE L L++N LK+LP SIG L +L  L+LE N +  LP  IG L+
Sbjct: 249 NRITKLPEDFCELANLEDLDLTSNWLKELPVSIGKLTRLVKLNLEFNHITYLPKSIGELE 308

Query: 473 ELQRLILQSNQLVSLPRAIG-HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
            L+ L L +N L  LP AIG +L NL+ L + +N +Q +P +IG L+ L  L L +N  L
Sbjct: 309 NLRVLNLDANCLTRLPCAIGSNLHNLTSLKLEDNMIQRLPTQIGDLKQLTRLCLRNNKPL 368

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
           + +P ELA    L  +SL+ C L +IP +IV  G   +I+YL+
Sbjct: 369 DQLPVELAALPLLSFLSLEGCNLRRIPEDIVQAGAGAVIKYLR 411



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 179/400 (44%), Gaps = 61/400 (15%)

Query: 119 SVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            V  L  L+ L +  N L   LP  +G +T L  L  + N +T++PD++A+  +L  L L
Sbjct: 46  GVGTLKELQILVIKSNNLQGPLPDDLGQLTKLQILDCSNNRITTVPDAIASCTKLMRLLL 105

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL-- 235
            +N + ELP  +  L  L+ L +++NR+  +  ++     L+ L++  N+I  LP +L  
Sbjct: 106 DYNCIGELPSSIGSLKELQQLGIKYNRLTRLPTELAQCQQLTELNVEGNQIVRLPDDLLC 165

Query: 236 -----------------------GELKNLVTLDLAHNHLEELP-KEIGNCTMLVTLDLQH 271
                                  G+L +L  L + +N+L+ +  K+  +   L +L L +
Sbjct: 166 KMPSLRSATLSRNAFSGFPTGAIGQLVHLEHLSMDYNNLDTVSTKDFVDADRLRSLSLGN 225

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           N +V++         L +L LSYNR+  +PE   +  +L + ++    L  LP       
Sbjct: 226 NNIVHLEIAASQWRQLVQLDLSYNRITKLPEDFCELANLEDLDLTSNWLKELP------- 278

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
            SI                   + T +  +N E N I  +P  I    +NL  +N+  N 
Sbjct: 279 VSIG------------------KLTRLVKLNLEFNHITYLPKSI-GELENLRVLNLDANC 319

Query: 392 LTSLPLDLGTWV-GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL-LKKLPSSIGNLR 449
           LT LP  +G+ +  LT L L  N I +L   I +L  L  L L NN  L +LP  +  L 
Sbjct: 320 LTRLPCAIGSNLHNLTSLKLEDNMIQRLPTQIGDLKQLTRLCLRNNKPLDQLPVELAALP 379

Query: 450 KLKCLDLEENKLESLPNEI------GFLKELQRLILQSNQ 483
            L  L LE   L  +P +I        +K L+ ++L S Q
Sbjct: 380 LLSFLSLEGCNLRRIPEDIVQAGAGAVIKYLRNILLVSEQ 419



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 155/321 (48%), Gaps = 6/321 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD S + IT +P ++   T L  L L  N +  LPS IG +  L  LG+  N LT LP  
Sbjct: 80  LDCSNNRITTVPDAIASCTKLMRLLLDYNCIGELPSSIGSLKELQQLGIKYNRLTRLPTE 139

Query: 166 LANLQQLRVLDLRHNKLNELP-MVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSM 223
           LA  QQL  L++  N++  LP  ++ K+ SL+   L  N         I  L +L  LSM
Sbjct: 140 LAQCQQLTELNVEGNQIVRLPDDLLCKMPSLRSATLSRNAFSGFPTGAIGQLVHLEHLSM 199

Query: 224 RDNKIRELPP-ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
             N +  +   +  +   L +L L +N++  L         LV LDL +N +  +P+   
Sbjct: 200 DYNNLDTVSTKDFVDADRLRSLSLGNNNIVHLEIAASQWRQLVQLDLSYNRITKLPEDFC 259

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L NL  L L+ N L+ +P ++ K   L + N+E   ++ LP   +  L ++  + L  N
Sbjct: 260 ELANLEDLDLTSNWLKELPVSIGKLTRLVKLNLEFNHITYLPKS-IGELENLRVLNLDAN 318

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL-LTSLPLDLGT 401
             T  P    +   ++ S+  E N I ++P  I    K L+++ +++N  L  LP++L  
Sbjct: 319 CLTRLPCAIGSNLHNLTSLKLEDNMIQRLPTQI-GDLKQLTRLCLRNNKPLDQLPVELAA 377

Query: 402 WVGLTELNLGTNQISKLSEDI 422
              L+ L+L    + ++ EDI
Sbjct: 378 LPLLSFLSLEGCNLRRIPEDI 398



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 92/190 (48%), Gaps = 23/190 (12%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           +  E    +   ++ LDLS + IT LP    +L +LE+L L  N L  LP  IG +T L 
Sbjct: 229 VHLEIAASQWRQLVQLDLSYNRITKLPEDFCELANLEDLDLTSNWLKELPVSIGKLTRLV 288

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L  N +T LP S+  L+ LRVL+L  N L  LP  +                     
Sbjct: 289 KLNLEFNHITYLPKSIGELENLRVLNLDANCLTRLPCAIGS------------------- 329

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH-LEELPKEIGNCTMLVTLDL 269
               L NL+ L + DN I+ LP ++G+LK L  L L +N  L++LP E+    +L  L L
Sbjct: 330 ---NLHNLTSLKLEDNMIQRLPTQIGDLKQLTRLCLRNNKPLDQLPVELAALPLLSFLSL 386

Query: 270 QHNELVNIPD 279
           +   L  IP+
Sbjct: 387 EGCNLRRIPE 396



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 126/302 (41%), Gaps = 74/302 (24%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ L L  + I  LP S+  L  L++L +  N+L  LP+++     LT L +  N +  L
Sbjct: 100 LMRLLLDYNCIGELPSSIGSLKELQQLGIKYNRLTRLPTELAQCQQLTELNVEGNQIVRL 159

Query: 163 PDSL-------------------------------------------------ANLQQLR 173
           PD L                                                  +  +LR
Sbjct: 160 PDDLLCKMPSLRSATLSRNAFSGFPTGAIGQLVHLEHLSMDYNNLDTVSTKDFVDADRLR 219

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
            L L +N +  L +   +   L  L L +NRI  +  D   L+NL  L +  N ++ELP 
Sbjct: 220 SLSLGNNNIVHLEIAASQWRQLVQLDLSYNRITKLPEDFCELANLEDLDLTSNWLKELPV 279

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIG------------NCTM------------LVTLDL 269
            +G+L  LV L+L  NH+  LPK IG            NC              L +L L
Sbjct: 280 SIGKLTRLVKLNLEFNHITYLPKSIGELENLRVLNLDANCLTRLPCAIGSNLHNLTSLKL 339

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNR-LESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
           + N +  +P  +G+L  LTRL L  N+ L+ +P  L+    L+  ++EGC L  +P+ ++
Sbjct: 340 EDNMIQRLPTQIGDLKQLTRLCLRNNKPLDQLPVELAALPLLSFLSLEGCNLRRIPEDIV 399

Query: 329 SS 330
            +
Sbjct: 400 QA 401


>gi|359683928|ref|ZP_09253929.1| hypothetical protein Lsan2_04276 [Leptospira santarosai str.
           2000030832]
          Length = 594

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 172/471 (36%), Positives = 273/471 (57%), Gaps = 7/471 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL+ +S+  LP  + KL  L++L L  N+L + P +I  +  L  L LA N LT+LP  
Sbjct: 104 LDLNYNSLATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPKE 163

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L+VL+L  N+   LP  + KL  LK L+L  N+  T+  +I+ L NL  L + +
Sbjct: 164 IGKLQKLKVLNLDGNQFTTLPKEIEKLQKLKELHLGSNQFTTLPKEIKKLQNLQGLHLNN 223

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+++ LP E+G+L+NL  L L +N L+ LPKEIG    L  L L +N+L  +P  +G L 
Sbjct: 224 NQLKTLPKEIGKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLTTLPKEIGKLQ 283

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L YN+L ++P+ + K   L   +     L++LP   +  L ++  + L  N+ T
Sbjct: 284 NLQGLGLHYNQLTTLPKEIGKLQKLQVLSFYSNELTTLPKE-IKKLQNLQWLDLHSNQLT 342

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
              S    +   +  ++   NQ+  +P  I  + + L ++++ DN LT+LP ++G    L
Sbjct: 343 TL-SKEIGKLQKLQELHLSSNQLTTLPKEI-GKLQKLQELHLGDNQLTTLPEEIGKLQKL 400

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            +L L  N+++ L ++I NL  L  L L NN L  LP  IGNL+KLK L L  N+L++LP
Sbjct: 401 KKLYLYNNRLTTLPKEIGNLQKLRGLDLGNNKLTALPIEIGNLQKLKWLYLTFNQLKTLP 460

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            EIG L++L+ L L  NQL ++P  IG+L  L  L + +N L ++P+EIG L++L  LYL
Sbjct: 461 KEIGNLQKLRGLDLSDNQLTTIPEEIGNLQKLRGLDLSDNQLTTLPKEIGNLQDLEVLYL 520

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
           + N  L  +P E+    +L+ ++L N PL+  P EI   G    +++L+++
Sbjct: 521 SGNQ-LTTLPKEIENLQSLESLNLSNNPLTSFPEEI---GKLQHLKWLRLE 567



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 172/461 (37%), Positives = 260/461 (56%), Gaps = 4/461 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L  + +T LP  + KL  LE L L  N LA+LP +IG +  L  L L  N LT
Sbjct: 76  QNLQKLSLYNNQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLT 135

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           + P  +  LQ+L+ L L HN+L  LP  + KL  LK+L L  N+  T+  +I+ L  L  
Sbjct: 136 TFPKEIEKLQKLQKLSLAHNQLTTLPKEIGKLQKLKVLNLDGNQFTTLPKEIEKLQKLKE 195

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+   LP E+ +L+NL  L L +N L+ LPKEIG    L  L L +N+L  +P  
Sbjct: 196 LHLGSNQFTTLPKEIKKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLKTLPKE 255

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L+ N+L ++P+ + K  +L    +    L++LP   +  L  +  ++  
Sbjct: 256 IGKLQNLQGLHLNNNQLTTLPKEIGKLQNLQGLGLHYNQLTTLPKE-IGKLQKLQVLSFY 314

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P     +  ++  ++   NQ+  +   I  + + L ++++  N LT+LP ++G
Sbjct: 315 SNELTTLPK-EIKKLQNLQWLDLHSNQLTTLSKEI-GKLQKLQELHLSSNQLTTLPKEIG 372

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L EL+LG NQ++ L E+I  L  L+ L L NN L  LP  IGNL+KL+ LDL  NK
Sbjct: 373 KLQKLQELHLGDNQLTTLPEEIGKLQKLKKLYLYNNRLTTLPKEIGNLQKLRGLDLGNNK 432

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L +LP EIG L++L+ L L  NQL +LP+ IG+L  L  L + +N L +IPEEIG L+ L
Sbjct: 433 LTALPIEIGNLQKLKWLYLTFNQLKTLPKEIGNLQKLRGLDLSDNQLTTIPEEIGNLQKL 492

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             L L+DN  L  +P E+    +L+++ L    L+ +P EI
Sbjct: 493 RGLDLSDNQ-LTTLPKEIGNLQDLEVLYLSGNQLTTLPKEI 532



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 160/449 (35%), Positives = 258/449 (57%), Gaps = 4/449 (0%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +L L  + +T  P  +EKL  L++L L  N+L +LP +IG +  L  L L  N  T+LP 
Sbjct: 126 DLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPKEIGKLQKLKVLNLDGNQFTTLPK 185

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            +  LQ+L+ L L  N+   LP  + KL +L+ L+L  N++KT+  +I  L NL  L + 
Sbjct: 186 EIEKLQKLKELHLGSNQFTTLPKEIKKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLN 245

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           +N+++ LP E+G+L+NL  L L +N L  LPKEIG    L  L L +N+L  +P  +G L
Sbjct: 246 NNQLKTLPKEIGKLQNLQGLHLNNNQLTTLPKEIGKLQNLQGLGLHYNQLTTLPKEIGKL 305

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             L  L    N L ++P+ + K  +L   ++    L++L    +  L  +  + LS N+ 
Sbjct: 306 QKLQVLSFYSNELTTLPKEIKKLQNLQWLDLHSNQLTTLSKE-IGKLQKLQELHLSSNQL 364

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
           T  P     +   +  ++   NQ+  +P  I  + + L K+ + +N LT+LP ++G    
Sbjct: 365 TTLPK-EIGKLQKLQELHLGDNQLTTLPEEI-GKLQKLKKLYLYNNRLTTLPKEIGNLQK 422

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L  L+LG N+++ L  +I NL  L+ L L+ N LK LP  IGNL+KL+ LDL +N+L ++
Sbjct: 423 LRGLDLGNNKLTALPIEIGNLQKLKWLYLTFNQLKTLPKEIGNLQKLRGLDLSDNQLTTI 482

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P EIG L++L+ L L  NQL +LP+ IG+L +L  L +  N L ++P+EI  L++L +L 
Sbjct: 483 PEEIGNLQKLRGLDLSDNQLTTLPKEIGNLQDLEVLYLSGNQLTTLPKEIENLQSLESLN 542

Query: 525 LNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L++N  L + P E+    +L+ + L+N P
Sbjct: 543 LSNNP-LTSFPEEIGKLQHLKWLRLENIP 570



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 173/337 (51%), Gaps = 30/337 (8%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L L+ + +  LP  + KL +L+ L+L  N+L +LP +IG + NL  LGL  N 
Sbjct: 235 KLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLTTLPKEIGKLQNLQGLGLHYNQ 294

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP  +  LQ+L+VL    N+L  LP  + KL +L+ L L  N++ T+  +I  L  L
Sbjct: 295 LTTLPKEIGKLQKLQVLSFYSNELTTLPKEIKKLQNLQWLDLHSNQLTTLSKEIGKLQKL 354

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHL----EE-------------------LP 255
             L +  N++  LP E+G+L+ L  L L  N L    EE                   LP
Sbjct: 355 QELHLSSNQLTTLPKEIGKLQKLQELHLGDNQLTTLPEEIGKLQKLKKLYLYNNRLTTLP 414

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
           KEIGN   L  LDL +N+L  +P  +GNL  L  L L++N+L+++P+ +     L   ++
Sbjct: 415 KEIGNLQKLRGLDLGNNKLTALPIEIGNLQKLKWLYLTFNQLKTLPKEIGNLQKLRGLDL 474

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPY 373
               L+++P+  + +L  +  + LS N+ T  P   G       +Y      NQ+  +P 
Sbjct: 475 SDNQLTTIPEE-IGNLQKLRGLDLSDNQLTTLPKEIGNLQDLEVLY---LSGNQLTTLPK 530

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
            I    ++L  +N+ +N LTS P ++G    L  L L
Sbjct: 531 EI-ENLQSLESLNLSNNPLTSFPEEIGKLQHLKWLRL 566


>gi|434388059|ref|YP_007098670.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
 gi|428019049|gb|AFY95143.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
          Length = 993

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 169/478 (35%), Positives = 272/478 (56%), Gaps = 31/478 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLP---------SQIGY----------- 145
           LD+ ++ I  LP  + ++T+L +LYLYGNK+ SLP         +++G            
Sbjct: 77  LDVWENKIKSLPDWLAQITNLTKLYLYGNKIESLPNWFSEMTRLTELGLGNSGLAEIPEL 136

Query: 146 ---VTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
              +TNLT LG +EN+L  LP+S++NL+ L+ L L  N L++LP  +  LT L+ LY+  
Sbjct: 137 VFSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSLSQLPESIALLTELEELYIWE 196

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N++  +   I  L++L+ L++ +N+I ELP  +G+L +L +L L  N +  +P+ IGN T
Sbjct: 197 NKLTEIPQAIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAIIPEAIGNLT 256

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  L L  N++  IP+ +GNL +LT L LS+N++  +P+T+     L   ++    ++ 
Sbjct: 257 SLTALGLSSNQIAIIPEAIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLSLRNNQIAE 316

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
           LP   + +LTS+ N+ L RNK    P   G  T  TS+Y     +NQI ++P  I     
Sbjct: 317 LPQT-IGNLTSLTNLFLGRNKIAELPQTIGNLTSLTSLY---LSNNQIAELPQTI-GNLT 371

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           +L+ +++  N +  LP  +G    LT LNL  NQI++L + I NL +L  L LSNN + +
Sbjct: 372 SLTSLDLSFNQIAELPQTIGNLTSLTSLNLYNNQIAELPQTIGNLTSLTNLFLSNNQIAE 431

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           LP +IGNL  L  L+L  N++  LP  IG L  L  L L  NQ+  LP+ IG+LT+L+ L
Sbjct: 432 LPQTIGNLTSLTSLNLWSNQIAELPQTIGNLTSLTSLDLSFNQIAELPQMIGNLTSLTNL 491

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           ++  N +  + + IG L +L  L L++N  +  +P  +   ++L  + L N  ++ IP
Sbjct: 492 NLSFNQIAELLQTIGNLTSLSDLDLSNNQ-IAELPQTIGNLTSLTDLKLYNNQIAVIP 548



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 155/427 (36%), Positives = 242/427 (56%), Gaps = 3/427 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L  S++++  LP S+  L +L++L L GN L+ LP  I  +T L  L + EN LT 
Sbjct: 142 NLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSLSQLPESIALLTELEELYIWENKLTE 201

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P ++  L  L  L+L  N++ ELP ++ KLTSL  L L  N+I  +   I  L++L+ L
Sbjct: 202 IPQAIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAIIPEAIGNLTSLTAL 261

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N+I  +P  +G L +L +LDL+ N + ELP+ IGN T L +L L++N++  +P  +
Sbjct: 262 GLSSNQIAIIPEAIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLSLRNNQIAELPQTI 321

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           GNL +LT L L  N++  +P+T+     L    +    ++ LP   + +LTS+ ++ LS 
Sbjct: 322 GNLTSLTNLFLGRNKIAELPQTIGNLTSLTSLYLSNNQIAELPQT-IGNLTSLTSLDLSF 380

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+    P       TS+ S+N  +NQI ++P  I     +L+ + + +N +  LP  +G 
Sbjct: 381 NQIAELPQ-TIGNLTSLTSLNLYNNQIAELPQTI-GNLTSLTNLFLSNNQIAELPQTIGN 438

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              LT LNL +NQI++L + I NL +L  L LS N + +LP  IGNL  L  L+L  N++
Sbjct: 439 LTSLTSLNLWSNQIAELPQTIGNLTSLTSLDLSFNQIAELPQMIGNLTSLTNLNLSFNQI 498

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
             L   IG L  L  L L +NQ+  LP+ IG+LT+L+ L +  N +  IPE   +L NL 
Sbjct: 499 AELLQTIGNLTSLSDLDLSNNQIAELPQTIGNLTSLTDLKLYNNQIAVIPEWFRSLNNLE 558

Query: 522 TLYLNDN 528
            L L  N
Sbjct: 559 KLDLRGN 565



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 164/483 (33%), Positives = 255/483 (52%), Gaps = 18/483 (3%)

Query: 93  KEFL----RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYL----------YGNKLAS 138
           +EFL    R  EE    LDL+  ++T LPP + KLTHLE+L L           GN L  
Sbjct: 4   QEFLELIDRAAEEQWKELDLAGMNLTELPPEIGKLTHLEKLILGKWDDKTGKAIGNLLTE 63

Query: 139 LPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL 198
           +P  I  +  LT L + EN + SLPD LA +  L  L L  NK+  LP    ++T L  L
Sbjct: 64  IPPVILSLPKLTSLDVWENKIKSLPDWLAQITNLTKLYLYGNKIESLPNWFSEMTRLTEL 123

Query: 199 YLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
            L  + +  +   +  L+NL+ L   +N ++ LP  +  LKNL  L L  N L +LP+ I
Sbjct: 124 GLGNSGLAEIPELVFSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSLSQLPESI 183

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
              T L  L +  N+L  IP  +G L +LT L L  N++  +P+ + K   L    +   
Sbjct: 184 ALLTELEELYIWENKLTEIPQAIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSN 243

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
            ++ +P+  + +LTS+  + LS N+    P       TS+ S++   NQI ++P  I   
Sbjct: 244 QIAIIPEA-IGNLTSLTALGLSSNQIAIIPE-AIGNLTSLTSLDLSFNQIAELPQTI-GN 300

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
             +L+ +++++N +  LP  +G    LT L LG N+I++L + I NL +L  L LSNN +
Sbjct: 301 LTSLTSLSLRNNQIAELPQTIGNLTSLTNLFLGRNKIAELPQTIGNLTSLTSLYLSNNQI 360

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
            +LP +IGNL  L  LDL  N++  LP  IG L  L  L L +NQ+  LP+ IG+LT+L+
Sbjct: 361 AELPQTIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLNLYNNQIAELPQTIGNLTSLT 420

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N +  +P+ IG L +L +L L  N  +  +P  +   ++L  + L    ++++P
Sbjct: 421 NLFLSNNQIAELPQTIGNLTSLTSLNLWSNQ-IAELPQTIGNLTSLTSLDLSFNQIAELP 479

Query: 559 SEI 561
             I
Sbjct: 480 QMI 482



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 154/420 (36%), Positives = 229/420 (54%), Gaps = 11/420 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L  +S++ LP S+  LT LEELY++ NKL  +P  IG +T+LT L L EN + 
Sbjct: 164 KNLKKLSLGGNSLSQLPESIALLTELEELYIWENKLTEIPQAIGKLTSLTSLNLGENQIA 223

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  L  L  L L  N++  +P  +  LTSL  L L  N+I  +   I  L++L+ 
Sbjct: 224 ELPQMIGKLTSLTSLKLWSNQIAIIPEAIGNLTSLTALGLSSNQIAIIPEAIGNLTSLTS 283

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+I ELP  +G L +L +L L +N + ELP+ IGN T L  L L  N++  +P  
Sbjct: 284 LDLSFNQIAELPQTIGNLTSLTSLSLRNNQIAELPQTIGNLTSLTNLFLGRNKIAELPQT 343

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNIT 338
           +GNL +LT L LS N++  +P+T+     L   ++    ++ LP   G L+SLTS+N   
Sbjct: 344 IGNLTSLTSLYLSNNQIAELPQTIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLN--- 400

Query: 339 LSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           L  N+    P   G  T  T+++     +NQI ++P  I     +L+ +N+  N +  LP
Sbjct: 401 LYNNQIAELPQTIGNLTSLTNLF---LSNNQIAELPQTI-GNLTSLTSLNLWSNQIAELP 456

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +G    LT L+L  NQI++L + I NL +L  L LS N + +L  +IGNL  L  LDL
Sbjct: 457 QTIGNLTSLTSLDLSFNQIAELPQMIGNLTSLTNLNLSFNQIAELLQTIGNLTSLSDLDL 516

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N++  LP  IG L  L  L L +NQ+  +P     L NL  L +  N +   PE +GT
Sbjct: 517 SNNQIAELPQTIGNLTSLTDLKLYNNQIAVIPEWFRSLNNLEKLDLRGNPVPIPPEILGT 576



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 11/167 (6%)

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLS----------NNLLKKLPSSIGNLRKLKCLDL 456
           EL+L    +++L  +I  L +LE L+L            NLL ++P  I +L KL  LD+
Sbjct: 20  ELDLAGMNLTELPPEIGKLTHLEKLILGKWDDKTGKAIGNLLTEIPPVILSLPKLTSLDV 79

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
            ENK++SLP+ +  +  L +L L  N++ SLP     +T L+ L +G + L  IPE + +
Sbjct: 80  WENKIKSLPDWLAQITNLTKLYLYGNKIESLPNWFSEMTRLTELGLGNSGLAEIPELVFS 139

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVV 563
           L NL  L  ++N  L  +P  ++   NL+ +SL    LSQ+P  I +
Sbjct: 140 LTNLTYLGFSENN-LQVLPESISNLKNLKKLSLGGNSLSQLPESIAL 185


>gi|421110794|ref|ZP_15571285.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803891|gb|EKS10018.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 558

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 174/465 (37%), Positives = 266/465 (57%), Gaps = 6/465 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+ +L L  + +T LP  +E L  L+ LYL  N+LA+LP +IG +  L  L L  N 
Sbjct: 60  KLQNLFSLYLENNQLTTLPQEIETLQKLKWLYLSENQLATLPKEIGKLQRLERLYLGGNQ 119

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT++P  +  LQ L  L L +N+L  LP  +  L  L+ L L  N+++T+  +I  L +L
Sbjct: 120 LTTIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHL 179

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++ +N++  LP E+G L+NL  L LA+N L  LPKEIG    L  L++ +N+L+ +P
Sbjct: 180 QDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNVFNNQLITLP 239

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L NL  L L  NRL ++P+ +     L    +    L++LP   +  L  +  + 
Sbjct: 240 QEIGTLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNNQLATLPKE-IGKLQRLEWLG 298

Query: 339 LSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
           L+ N+  + P   G  Q  ++  +  E+N+++  P  I + + NL +++++ N  T+LP 
Sbjct: 299 LANNQLKSLPQEIGKLQ--NLKELILENNRLESFPKEIGTLS-NLQRLHLEYNGFTTLPQ 355

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++GT   L  LNL  NQ++ L ++I  L  LE L L NN L  LP  IG LRKL+ L L 
Sbjct: 356 EIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLRKLQHLYLA 415

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
            N+L +LP EIG L+ L+ L L+ NQL +LP AIG L  L +LS+  N L ++PEEIGTL
Sbjct: 416 NNQLATLPKEIGQLQNLEDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLPEEIGTL 475

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           + +  L L +N  L  +P E+    NL+ + L   P +  P EIV
Sbjct: 476 QKIVKLNLANNQ-LRTLPQEIGQLQNLKDLDLSGNPFTTFPQEIV 519



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 148/401 (36%), Positives = 229/401 (57%), Gaps = 4/401 (0%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +L ++L N   + +LDL  N+L  LP  + KL +L  LYL  N++ T+  +I+ L  L  
Sbjct: 30  NLNEALKNPMDVWMLDLTRNQLTVLPQEIGKLQNLFSLYLENNQLTTLPQEIETLQKLKW 89

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++  LP E+G+L+ L  L L  N L  +P+EIG    L  L L +N+L+ +P  
Sbjct: 90  LYLSENQLATLPKEIGKLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQE 149

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L +L  L L+ N+L ++P+ +    HL + NV    L +LP   + +L ++  + L+
Sbjct: 150 IGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQE-IGTLQNLKYLRLA 208

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P     +  ++  +N  +NQ+  +P  I +  +NL  +N+++N L +LP ++G
Sbjct: 209 YNQLTTLPK-EIGRLENLQDLNVFNNQLITLPQEIGT-LQNLQSLNLENNRLITLPKEIG 266

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
           T   L  L L  NQ++ L ++I  L  LE L L+NN LK LP  IG L+ LK L LE N+
Sbjct: 267 TLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLANNQLKSLPQEIGKLQNLKELILENNR 326

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           LES P EIG L  LQRL L+ N   +LP+ IG L  L +L++  N L ++P+EIG LE L
Sbjct: 327 LESFPKEIGTLSNLQRLHLEYNGFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERL 386

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             L L +N  L  +P E+     LQ + L N  L+ +P EI
Sbjct: 387 EWLNLYNNR-LATLPKEIGTLRKLQHLYLANNQLATLPKEI 426



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/343 (35%), Positives = 191/343 (55%), Gaps = 6/343 (1%)

Query: 221 LSMRDNKI--RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
           L   DNK+  R L   L    ++  LDL  N L  LP+EIG    L +L L++N+L  +P
Sbjct: 19  LYAEDNKLYHRNLNEALKNPMDVWMLDLTRNQLTVLPQEIGKLQNLFSLYLENNQLTTLP 78

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +  L  L  L LS N+L ++P+ + K   L    + G  L+++P   + +L  +  ++
Sbjct: 79  QEIETLQKLKWLYLSENQLATLPKEIGKLQRLERLYLGGNQLTTIPQE-IGALQDLEELS 137

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           L  N+    P    T    +  +N  +NQ+  +P  I +  ++L  +N+ +N L +LP +
Sbjct: 138 LYNNQLITLPQEIGT-LQDLEELNLANNQLRTLPKEIGT-LQHLQDLNVFNNQLITLPQE 195

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +GT   L  L L  NQ++ L ++I  L NL+ L + NN L  LP  IG L+ L+ L+LE 
Sbjct: 196 IGTLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLEN 255

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L +LP EIG L++L+ L L +NQL +LP+ IG L  L +L +  N L+S+P+EIG L+
Sbjct: 256 NRLITLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLANNQLKSLPQEIGKLQ 315

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           NL  L L +N  L + P E+   SNLQ + L+    + +P EI
Sbjct: 316 NLKELIL-ENNRLESFPKEIGTLSNLQRLHLEYNGFTTLPQEI 357


>gi|255082904|ref|XP_002504438.1| predicted protein [Micromonas sp. RCC299]
 gi|226519706|gb|ACO65696.1| predicted protein [Micromonas sp. RCC299]
          Length = 487

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 167/456 (36%), Positives = 260/456 (57%), Gaps = 5/456 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS + +T +P  + +LT LE L L  N+L S+P++IG + +LT L L +N LTSLP  
Sbjct: 3   LNLSGNQLTSVPAEIGQLTSLERLCLNDNQLTSVPAEIGRLASLTELYLEDNQLTSLPAE 62

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L  L L  N+L  +P  + +L SL  LYL  N++ +V  +I  L++L +L + +
Sbjct: 63  IGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGKNQLTSVPAEIGQLTSLGLLGLDN 122

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  +P E+G L  L  LDL  N L  +P E+G  T L  L LQHN L ++P  +G L 
Sbjct: 123 NQLSSVPAEIGRLTALKGLDLQKNQLTSVPAEVGQLTSLEALRLQHNRLTSVPAEIGQLA 182

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L +L ++ N+L S+P  + +   L E  +E   L+SLP   +  L  +  + L+ N+ T
Sbjct: 183 SLEKLYVADNQLTSMPAEIWRLTSLRELYLEDNRLTSLP-AEIGQLALLKELWLNDNELT 241

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P+    Q TS+  +    NQ+  +P  I  +  +L ++ ++ N LTS+P ++G    L
Sbjct: 242 GLPA-EIGQLTSLRGLYLYGNQLTSVPAEI-GQLMSLRELYLQGNQLTSVPAEIGQLTSL 299

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             LNL  NQ++ +  +I  L  L  L LS N L  LP+ IG L  L+ LDL++N+L S+P
Sbjct: 300 DVLNLSGNQLTSVPAEIGQLTFLGCLDLSYNYLTSLPAEIGQLMSLRLLDLDDNRLASVP 359

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            EIG L+ L+ L L  N L S+P  IG LT +  L +  N L S+P E+G L  L  L L
Sbjct: 360 AEIGQLRSLRELFLNGNLLTSVPAEIGQLT-VRELYLENNQLTSVPAEVGQLAALEQLNL 418

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           + N  L ++P E+ L ++L+ + L+   L+ +P EI
Sbjct: 419 SRNK-LTSVPAEIGLLTSLRWLLLNGNQLTSVPGEI 453



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 141/388 (36%), Positives = 218/388 (56%), Gaps = 4/388 (1%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           VL+L  N+L  +P  + +LTSL+ L L  N++ +V  +I  L++L+ L + DN++  LP 
Sbjct: 2   VLNLSGNQLTSVPAEIGQLTSLERLCLNDNQLTSVPAEIGRLASLTELYLEDNQLTSLPA 61

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+G+L +L  L L  N L  +P EIG    L  L L  N+L ++P  +G L +L  L L 
Sbjct: 62  EIGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGKNQLTSVPAEIGQLTSLGLLGLD 121

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
            N+L SVP  + +   L   +++   L+S+P   +  LTS+  + L  N+ T+ P+    
Sbjct: 122 NNQLSSVPAEIGRLTALKGLDLQKNQLTSVP-AEVGQLTSLEALRLQHNRLTSVPA-EIG 179

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q  S+  +    NQ+  +P  I+ R  +L ++ ++DN LTSLP ++G    L EL L  N
Sbjct: 180 QLASLEKLYVADNQLTSMPAEIW-RLTSLRELYLEDNRLTSLPAEIGQLALLKELWLNDN 238

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           +++ L  +I  L +L  L L  N L  +P+ IG L  L+ L L+ N+L S+P EIG L  
Sbjct: 239 ELTGLPAEIGQLTSLRGLYLYGNQLTSVPAEIGQLMSLRELYLQGNQLTSVPAEIGQLTS 298

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L  L L  NQL S+P  IG LT L  L +  N L S+P EIG L +L  L L+DN  L +
Sbjct: 299 LDVLNLSGNQLTSVPAEIGQLTFLGCLDLSYNYLTSLPAEIGQLMSLRLLDLDDNR-LAS 357

Query: 534 IPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +P E+    +L+ + L+   L+ +P+EI
Sbjct: 358 VPAEIGQLRSLRELFLNGNLLTSVPAEI 385



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/320 (35%), Positives = 180/320 (56%), Gaps = 4/320 (1%)

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
           + L+L+ N L  +P EIG  T L  L L  N+L ++P  +G L +LT L L  N+L S+P
Sbjct: 1   MVLNLSGNQLTSVPAEIGQLTSLERLCLNDNQLTSVPAEIGRLASLTELYLEDNQLTSLP 60

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
             + +   L    +    L+S+P   +  L S++ + L +N+ T+ P+    Q TS+  +
Sbjct: 61  AEIGQLASLEWLCLIDNQLTSVP-AEIGQLASLDGLYLGKNQLTSVPA-EIGQLTSLGLL 118

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
             ++NQ+  +P  I  R   L  ++++ N LTS+P ++G    L  L L  N+++ +  +
Sbjct: 119 GLDNNQLSSVPAEI-GRLTALKGLDLQKNQLTSVPAEVGQLTSLEALRLQHNRLTSVPAE 177

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           I  L +LE L +++N L  +P+ I  L  L+ L LE+N+L SLP EIG L  L+ L L  
Sbjct: 178 IGQLASLEKLYVADNQLTSMPAEIWRLTSLRELYLEDNRLTSLPAEIGQLALLKELWLND 237

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           N+L  LP  IG LT+L  L +  N L S+P EIG L +L  LYL  N  L ++P E+   
Sbjct: 238 NELTGLPAEIGQLTSLRGLYLYGNQLTSVPAEIGQLMSLRELYLQGNQ-LTSVPAEIGQL 296

Query: 542 SNLQIMSLDNCPLSQIPSEI 561
           ++L +++L    L+ +P+EI
Sbjct: 297 TSLDVLNLSGNQLTSVPAEI 316


>gi|260812948|ref|XP_002601182.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
 gi|229286473|gb|EEN57194.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
          Length = 462

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 161/460 (35%), Positives = 253/460 (55%), Gaps = 4/460 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           NI +LDLS   +  LPP V KLT LE L L  N L +LP+++G +TN+  L L+   L +
Sbjct: 1   NIKHLDLSDCQLHTLPPEVGKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLNLSHCQLRT 60

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L QL  LDL  N L  LP  V +LT++K L L   ++ T+  ++  L+ L  L
Sbjct: 61  LPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSHCQLHTLPLEVWKLTQLEWL 120

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N ++ LP E+G+L N+  LDL+   L  LP E+G  T L  LDL  N L  +P  +
Sbjct: 121 DLSSNPLQTLPAEVGQLTNVKHLDLSQCQLRTLPSEVGRLTQLEWLDLSSNPLQTLPAEV 180

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G+L NL +L L  N L+++P  +  C ++   ++  C L +LP  +   LT +  + L  
Sbjct: 181 GHLTNLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVW-KLTQLEWLDLRS 239

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N     P+      T+V  +N    Q+  +P  +  R   L K+++  N L +LP ++G 
Sbjct: 240 NPLQTLPTEV-GHLTNVKYLNLSDCQLHILPPEV-GRLTQLEKLDLCSNPLQTLPAEVGH 297

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +  L+L   Q+  L  ++  L  LE L LS+N L+ LP+ +G L  +K L+L + +L
Sbjct: 298 CTNVKHLDLSHCQLRTLPFEVWKLTQLEWLSLSSNPLQTLPAEVGQLTNVKQLNLSDCQL 357

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            +LP E+G L +L+RL L SN L +LP  +G LTN+ +L + +  L ++P E+G L  L 
Sbjct: 358 HTLPPEVGKLTQLERLDLSSNPLQTLPAEVGQLTNVKHLDLSQCLLHTLPPEVGRLTQLE 417

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L L  N  L+ +P E+   +N++ + L +C L  +P E+
Sbjct: 418 WLDLRSNP-LHALPAEVGQLTNVKHLDLSHCQLHTLPPEV 456



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 145/419 (34%), Positives = 230/419 (54%), Gaps = 3/419 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +L+LS   +  LPP V +LT LE L L  N L +LP+++G +TN+  L L+   L +
Sbjct: 47  NVKHLNLSHCQLRTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSHCQLHT 106

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L QL  LDL  N L  LP  V +LT++K L L   +++T+  ++  L+ L  L
Sbjct: 107 LPLEVWKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSQCQLRTLPSEVGRLTQLEWL 166

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N ++ LP E+G L NL  LDL  N L+ LP E+G+CT +  LDL H +L  +P  +
Sbjct: 167 DLSSNPLQTLPAEVGHLTNLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEV 226

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L  L  L L  N L+++P  +    ++   N+  C L  LP  +   LT +  + L  
Sbjct: 227 WKLTQLEWLDLRSNPLQTLPTEVGHLTNVKYLNLSDCQLHILPPEV-GRLTQLEKLDLCS 285

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N     P+      T+V  ++  H Q+  +P+ ++ +   L  +++  N L +LP ++G 
Sbjct: 286 NPLQTLPAEV-GHCTNVKHLDLSHCQLRTLPFEVW-KLTQLEWLSLSSNPLQTLPAEVGQ 343

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              + +LNL   Q+  L  ++  L  LE L LS+N L+ LP+ +G L  +K LDL +  L
Sbjct: 344 LTNVKQLNLSDCQLHTLPPEVGKLTQLERLDLSSNPLQTLPAEVGQLTNVKHLDLSQCLL 403

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
            +LP E+G L +L+ L L+SN L +LP  +G LTN+ +L +    L ++P E+G L  L
Sbjct: 404 HTLPPEVGRLTQLEWLDLRSNPLHALPAEVGQLTNVKHLDLSHCQLHTLPPEVGRLTQL 462


>gi|158335195|ref|YP_001516367.1| hypothetical protein AM1_2038 [Acaryochloris marina MBIC11017]
 gi|158305436|gb|ABW27053.1| leucine-rich repeat containing outermembrane protein, putative
           [Acaryochloris marina MBIC11017]
          Length = 659

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 180/479 (37%), Positives = 265/479 (55%), Gaps = 27/479 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL  + +  LP  V +LT L +L L  N+L+ LP ++  + +L  L L  N LT+LP S
Sbjct: 89  LDLCSNRLNRLPAEVTQLTTLSKLALCFNQLSHLPMEMAQLKHLQSLDLTANQLTNLPSS 148

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L++L+ LDL +N L  LP  + +L  L+ L L  N++  + P+I  L+NL  L +  
Sbjct: 149 VTQLKELQTLDLSNNWLKSLPPEIAQLNKLRRLDLFRNQLSGLPPEIIKLNNLQTLGLGH 208

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N +  LP  + +L NL  LDL    L+ LP EI   T L  LDL  N+L ++P  +  L+
Sbjct: 209 NTLSSLPATIAKLTNLKKLDLRATSLKRLPPEILQLTKLQELDLSDNKLSSLPPEIAQLV 268

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  LRL + +L   P  LS+  HL E ++ G +LSSLP   ++ L  +  + LS N   
Sbjct: 269 NLQSLRLKFTQLSHPPAELSQLTHLQELDLSGNSLSSLPRE-MAKLKKLQKLDLSYNSLR 327

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P+   TQ T++ S++    Q++ +P  I ++  NL  +++ DN LT LP ++GT   L
Sbjct: 328 NLPTVI-TQLTTLRSLDLRSTQLNSLPPEI-AQLINLQSLDLYDNPLTHLPQEIGTLTHL 385

Query: 406 TELNLGT-----------------------NQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
            +LNL                         NQ+S L  +I  +++L+ L LS N L KLP
Sbjct: 386 KKLNLSKTQLTNLPPAIMKLKRLQSLDFSGNQLSSLPIEITQIISLKELNLSFNQLSKLP 445

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
           + IG L  L+ LDL ENKL+SLP EIG L  L+ L+L+ NQL +LP  IG L NL  LS+
Sbjct: 446 ADIGQLNNLQELDLRENKLDSLPKEIGQLNNLKSLVLRFNQLNTLPPDIGQLKNLKSLSI 505

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             N L S+P EIG L +L +L L  N  L+++P E+    NL  ++L    LS +P E+
Sbjct: 506 HGNTLSSLPPEIGKLSSLKSLILRSNR-LSSLPPEIGKLHNLNSLNLVENQLSSLPIEM 563



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 176/485 (36%), Positives = 261/485 (53%), Gaps = 27/485 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS + +  LPP + +L  L  L L+ N+L+ LP +I  + NL  LGL  N+L+SLP +
Sbjct: 158 LDLSNNWLKSLPPEIAQLNKLRRLDLFRNQLSGLPPEIIKLNNLQTLGLGHNTLSSLPAT 217

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +A L  L+ LDLR   L  LP  + +LT L+ L L  N++ ++ P+I  L NL  L ++ 
Sbjct: 218 IAKLTNLKKLDLRATSLKRLPPEILQLTKLQELDLSDNKLSSLPPEIAQLVNLQSLRLKF 277

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKE-----------------------IGNCT 262
            ++   P EL +L +L  LDL+ N L  LP+E                       I   T
Sbjct: 278 TQLSHPPAELSQLTHLQELDLSGNSLSSLPREMAKLKKLQKLDLSYNSLRNLPTVITQLT 337

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L +LDL+  +L ++P  +  LINL  L L  N L  +P+ +    HL + N+    L++
Sbjct: 338 TLRSLDLRSTQLNSLPPEIAQLINLQSLDLYDNPLTHLPQEIGTLTHLKKLNLSKTQLTN 397

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LP  ++  L  + ++  S N+ ++ P    TQ  S+  +N   NQ+ K+P  I  +  NL
Sbjct: 398 LPPAIMK-LKRLQSLDFSGNQLSSLPIEI-TQIISLKELNLSFNQLSKLPADI-GQLNNL 454

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
            ++++++N L SLP ++G    L  L L  NQ++ L  DI  L NL+ L +  N L  LP
Sbjct: 455 QELDLRENKLDSLPKEIGQLNNLKSLVLRFNQLNTLPPDIGQLKNLKSLSIHGNTLSSLP 514

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
             IG L  LK L L  N+L SLP EIG L  L  L L  NQL SLP  +  L NL  L +
Sbjct: 515 PEIGKLSSLKSLILRSNRLSSLPPEIGKLHNLNSLNLVENQLSSLPIEMRKLQNLRELDL 574

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             N L+++P E+G L++L  + L+DN  L+N+P E+    NL ++SLD   LS +P EI 
Sbjct: 575 RNNRLRNLPLEMGQLKSLGLVDLSDNQ-LSNLPKEMGQLYNLTVLSLDRNQLSNLPIEIE 633

Query: 563 VGGPS 567
              PS
Sbjct: 634 QLWPS 638



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 175/478 (36%), Positives = 258/478 (53%), Gaps = 25/478 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL+ + +T+LP SV +L  L+ L L  N L SLP +I  +  L  L L  N L+ LP  
Sbjct: 135 LDLTANQLTNLPSSVTQLKELQTLDLSNNWLKSLPPEIAQLNKLRRLDLFRNQLSGLPPE 194

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L+ L L HN L+ LP  + KLT+LK L LR   +K + P+I  L+ L  L + D
Sbjct: 195 IIKLNNLQTLGLGHNTLSSLPATIAKLTNLKKLDLRATSLKRLPPEILQLTKLQELDLSD 254

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+  LPPE+ +L NL +L L    L   P E+   T L  LDL  N L ++P  +  L 
Sbjct: 255 NKLSSLPPEIAQLVNLQSLRLKFTQLSHPPAELSQLTHLQELDLSGNSLSSLPREMAKLK 314

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL------------------ 327
            L +L LSYN L ++P  +++   L   ++    L+SLP  +                  
Sbjct: 315 KLQKLDLSYNSLRNLPTVITQLTTLRSLDLRSTQLNSLPPEIAQLINLQSLDLYDNPLTH 374

Query: 328 ----LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
               + +LT +  + LS+ + T  P     +   + S++F  NQ+  +P  I ++  +L 
Sbjct: 375 LPQEIGTLTHLKKLNLSKTQLTNLPPAI-MKLKRLQSLDFSGNQLSSLPIEI-TQIISLK 432

Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
           ++N+  N L+ LP D+G    L EL+L  N++  L ++I  L NL+ LVL  N L  LP 
Sbjct: 433 ELNLSFNQLSKLPADIGQLNNLQELDLRENKLDSLPKEIGQLNNLKSLVLRFNQLNTLPP 492

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
            IG L+ LK L +  N L SLP EIG L  L+ LIL+SN+L SLP  IG L NL+ L++ 
Sbjct: 493 DIGQLKNLKSLSIHGNTLSSLPPEIGKLSSLKSLILRSNRLSSLPPEIGKLHNLNSLNLV 552

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           EN L S+P E+  L+NL  L L +N  L N+P E+    +L ++ L +  LS +P E+
Sbjct: 553 ENQLSSLPIEMRKLQNLRELDLRNNR-LRNLPLEMGQLKSLGLVDLSDNQLSNLPKEM 609



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 156/420 (37%), Positives = 230/420 (54%), Gaps = 3/420 (0%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            K  N+  LDL  +S+  LPP + +LT L+EL L  NKL+SLP +I  + NL  L L   
Sbjct: 219 AKLTNLKKLDLRATSLKRLPPEILQLTKLQELDLSDNKLSSLPPEIAQLVNLQSLRLKFT 278

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L+  P  L+ L  L+ LDL  N L+ LP  + KL  L+ L L +N ++ +   I  L+ 
Sbjct: 279 QLSHPPAELSQLTHLQELDLSGNSLSSLPREMAKLKKLQKLDLSYNSLRNLPTVITQLTT 338

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +R  ++  LPPE+ +L NL +LDL  N L  LP+EIG  T L  L+L   +L N+
Sbjct: 339 LRSLDLRSTQLNSLPPEIAQLINLQSLDLYDNPLTHLPQEIGTLTHLKKLNLSKTQLTNL 398

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  +  L  L  L  S N+L S+P  +++ + L E N+    LS LP   +  L ++  +
Sbjct: 399 PPAIMKLKRLQSLDFSGNQLSSLPIEITQIISLKELNLSFNQLSKLPAD-IGQLNNLQEL 457

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            L  NK  + P     Q  ++ S+    NQ++ +P  I  + KNL  +++  N L+SLP 
Sbjct: 458 DLRENKLDSLPKEI-GQLNNLKSLVLRFNQLNTLPPDI-GQLKNLKSLSIHGNTLSSLPP 515

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++G    L  L L +N++S L  +I  L NL  L L  N L  LP  +  L+ L+ LDL 
Sbjct: 516 EIGKLSSLKSLILRSNRLSSLPPEIGKLHNLNSLNLVENQLSSLPIEMRKLQNLRELDLR 575

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
            N+L +LP E+G LK L  + L  NQL +LP+ +G L NL+ LS+  N L ++P EI  L
Sbjct: 576 NNRLRNLPLEMGQLKSLGLVDLSDNQLSNLPKEMGQLYNLTVLSLDRNQLSNLPIEIEQL 635



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/217 (40%), Positives = 130/217 (59%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS + ++ LP  + +L +L+EL L  NKL SLP +IG + NL  L L  N L +LP  
Sbjct: 434 LNLSFNQLSKLPADIGQLNNLQELDLRENKLDSLPKEIGQLNNLKSLVLRFNQLNTLPPD 493

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L +  N L+ LP  + KL+SLK L LR NR+ ++ P+I  L NL+ L++ +
Sbjct: 494 IGQLKNLKSLSIHGNTLSSLPPEIGKLSSLKSLILRSNRLSSLPPEIGKLHNLNSLNLVE 553

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+ +L+NL  LDL +N L  LP E+G    L  +DL  N+L N+P  +G L 
Sbjct: 554 NQLSSLPIEMRKLQNLRELDLRNNRLRNLPLEMGQLKSLGLVDLSDNQLSNLPKEMGQLY 613

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           NLT L L  N+L ++P  + +     +  VEG  L S
Sbjct: 614 NLTVLSLDRNQLSNLPIEIEQLWPSTKITVEGNPLPS 650


>gi|418669438|ref|ZP_13230822.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410754822|gb|EKR16467.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 633

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 174/482 (36%), Positives = 256/482 (53%), Gaps = 25/482 (5%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS  + T LP  +E+L +L+EL L  N+LA+ P+ I  +  L  L L+EN L  
Sbjct: 51  NVRVLDLSGQNFTTLPKKIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVM 110

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP+ +  LQ L+ L L  NKL   P  + +L +L+ L L+ N++ T+  +I  L NL  L
Sbjct: 111 LPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKL 170

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++R N++  LP E+G+L+NL TL+L  N L  LP EIG    L TL L  N+L   P  +
Sbjct: 171 NLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEI 230

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L L +NRL ++P+ + +  +L    +    L++ P   +  L  + ++ L R
Sbjct: 231 GQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKE-IGQLKKLQDLGLGR 289

Query: 342 NKFTAYPSG-GP-----------TQFTSV----------YSINFEHNQIDKIPYGIFSRA 379
           N+ T +P   G             QF +V            +N  +NQ+  +P  I  + 
Sbjct: 290 NQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEI-GQL 348

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           K L  +++  N LT+LP ++G    L  L+LGTNQ++ L ++I  L NL  L L  N L 
Sbjct: 349 KKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLA 408

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
             P  IG L  L+ LDL  N+L +LP EIG LK L+ L L  NQL + P+ IG L  L  
Sbjct: 409 TFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQD 468

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPS 559
           L +  N L  +P+EIG LE L  L L+ N  +  +P E+    NLQ++ L       +  
Sbjct: 469 LGLSYNRLVILPKEIGQLEKLQDLGLSYNRLV-ILPKEIGQLKNLQMLDLCYNQFKTVSK 527

Query: 560 EI 561
           EI
Sbjct: 528 EI 529



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 172/484 (35%), Positives = 263/484 (54%), Gaps = 27/484 (5%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L K+ +   P  + +L +L+ L L  N+LA+LP +IG + NL  L L +N LT
Sbjct: 119 QNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLT 178

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L+L+ N+L  LP+ + +L +L+ L L  N++ T   +I  L NL  
Sbjct: 179 VLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQE 238

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L+++ N++  LP E+G+LKNL  L+L+ N L   PKEIG    L  L L  N+L   P  
Sbjct: 239 LNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKE 298

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L YN+ ++V + + +  +L + N+    L++LP   +  L  + +++L 
Sbjct: 299 IGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLP-AEIGQLKKLQDLSLG 357

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN+ T  P     Q  ++Y+++   NQ+  +P  I  + KNL  + +  N L + P ++G
Sbjct: 358 RNQLTTLPK-EIGQLKNLYNLDLGTNQLTTLPKEI-GQLKNLYNLGLGRNQLATFPKEIG 415

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L EL+L  N+++ L ++I  L NLE L LS N L   P  IG L+KL+ L L  N+
Sbjct: 416 QLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNR 475

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLS------------VGE---- 504
           L  LP EIG L++LQ L L  N+LV LP+ IG L NL  L             +G+    
Sbjct: 476 LVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNL 535

Query: 505 -------NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
                  N L ++P EIG L+NL+ L L  N  L  +P E+    NL  + L    L+ +
Sbjct: 536 LQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQ-LTTLPKEIGQLKNLYNLGLGTNQLTTL 594

Query: 558 PSEI 561
           P EI
Sbjct: 595 PKEI 598



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 148/415 (35%), Positives = 225/415 (54%), Gaps = 26/415 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L LS++ +T  P  + +L +L+EL L  N+L +LP +IG + NL  L L+EN LT
Sbjct: 211 QNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLT 270

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           + P  +  L++L+ L L  N+L   P  + +L +L++L L +N+ KTV  +I  L NL  
Sbjct: 271 TFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQ 330

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  N++  LP E+G+LK L  L L  N L  LPKEIG    L  LDL  N+L  +P  
Sbjct: 331 LNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKE 390

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L + P+ + +  +L E ++    L++LP   +  L ++ N+ LS
Sbjct: 391 IGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKE-IGQLKNLENLELS 449

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T +P                             + K L  + +  N L  LP ++G
Sbjct: 450 ENQLTTFPKE-------------------------IGQLKKLQDLGLSYNRLVILPKEIG 484

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L +L L  N++  L ++I  L NL++L L  N  K +   IG L+ L  L+L  N+
Sbjct: 485 QLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQ 544

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L +LP EIG LK L  L L +NQL +LP+ IG L NL  L +G N L ++P+EIG
Sbjct: 545 LATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 599



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N   ++ LDL      +LP +I  LK LQ L L+ NQL + P  I  L  L 
Sbjct: 40  RDLTEALQNPLNVRVLDLSGQNFTTLPKKIEQLKNLQELDLRDNQLATFPAVIVELQKLE 99

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L + EN L  +P EIG L+NL  L L  N  +   P E+    NLQ ++L +  L+ +P
Sbjct: 100 SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLI-TFPKEIGQLRNLQTLNLQDNQLATLP 158

Query: 559 SEI 561
            EI
Sbjct: 159 VEI 161


>gi|417781290|ref|ZP_12429042.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778541|gb|EKR63167.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 591

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 170/471 (36%), Positives = 263/471 (55%), Gaps = 8/471 (1%)

Query: 93  KEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCL 152
           KE L+   +N+  L L  + +T L   + +L  L  L L  N+ A+LP +I  + NL  L
Sbjct: 88  KEILQL--QNLQMLGLCCNQLTILSEEIGQLQKLRALDLRANQFATLPKEILQLQNLQTL 145

Query: 153 GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
            L  N LT+LP  +  LQ+L+ LDLR N+L  LP  + +L SL+ LYLR N+  T+  +I
Sbjct: 146 NLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLRANQFATLPKEI 205

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L NL  L++  N++  LP E+ +L+ L  LDL  N L  LPKEIG    L TL L  N
Sbjct: 206 LQLQNLQALNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLLAN 265

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
           +L  +P+ +G L NL +L L  NR  ++P+ + +  +L    + G  L++ P   +  L 
Sbjct: 266 QLTILPEEIGKLRNLQKLYLCENRFTTLPKDIGQLQNLQSLYLYGNQLTAFPKE-IEQLQ 324

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
           ++  + LS N+ T  P     Q  ++  +N  +NQ+ K+P  +  + +NL  +++    +
Sbjct: 325 NLQILNLSYNRLTTLPE-EIGQLQNLQILNLSYNQLTKLPKEL-GKLRNLKTLDLHAIQI 382

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
           T+ P ++     L +LN    Q++ L  +I  + NL+ L L  N L  LP  IG L+ L+
Sbjct: 383 TTFPKEILQLQNLEKLNWSRTQLTTLPGEIGQMQNLKELNLEKNQLTALPKEIGRLQNLE 442

Query: 453 CLDL--EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
            L+L    N+  SLP EIG L  L+ L L  N L +LP+ IG L+ L  L++  N+L+++
Sbjct: 443 ELNLNSNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEIGQLSRLETLTLFRNSLETL 502

Query: 511 PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           PEEIG L NL  L L+ N  L++IP E+    NL+I+ L   PL+++P EI
Sbjct: 503 PEEIGQLWNLRELDLSYNP-LSSIPKEIGQLKNLRILHLRKTPLARLPDEI 552



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 158/426 (37%), Positives = 235/426 (55%), Gaps = 28/426 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL ++ +T LP  + +L  L+ LYL  N+ A+LP +I  + NL  L L  N LT+LP  
Sbjct: 168 LDLRENQLTTLPKEIGQLKSLQTLYLRANQFATLPKEILQLQNLQALNLDSNELTALPKE 227

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L+ LDLR N+L  LP  + +L SL+ LYL  N++  +  +I  L NL  L + +
Sbjct: 228 MRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLTILPEEIGKLRNLQKLYLCE 287

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+   LP ++G+L+NL +L L  N L   PKEI     L  L+L +N L  +P+ +G L 
Sbjct: 288 NRFTTLPKDIGQLQNLQSLYLYGNQLTAFPKEIEQLQNLQILNLSYNRLTTLPEEIGQLQ 347

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L LSYN+L  +P+ L K  +L   ++    +++ P  +L  L ++  +  SR + T
Sbjct: 348 NLQILNLSYNQLTKLPKELGKLRNLKTLDLHAIQITTFPKEILQ-LQNLEKLNWSRTQLT 406

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                         G   + +NL ++N++ N LT+LP ++G    L
Sbjct: 407 TLP-------------------------GEIGQMQNLKELNLEKNQLTALPKEIGRLQNL 441

Query: 406 TELNLGTN--QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            ELNL +N  Q S L ++I  L NL+ L L +N+L  LP  IG L +L+ L L  N LE+
Sbjct: 442 EELNLNSNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEIGQLSRLETLTLFRNSLET 501

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           LP EIG L  L+ L L  N L S+P+ IG L NL  L + +  L  +P+EIG L++L  L
Sbjct: 502 LPEEIGQLWNLRELDLSYNPLSSIPKEIGQLKNLRILHLRKTPLARLPDEIGELQDLEEL 561

Query: 524 YLNDNT 529
            LN +T
Sbjct: 562 ILNPDT 567



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 172/481 (35%), Positives = 258/481 (53%), Gaps = 29/481 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   ++ LP  + +L +L+ L L+ NKL  LP +I  + NL  LGL  N LT L + 
Sbjct: 53  LNLSFQKLSTLPKEIGELQNLQTLDLFDNKLTVLPKEILQLQNLQMLGLCCNQLTILSEE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+LR LDLR N+   LP  + +L +L+ L L  N +  +  +++ L  L  L +R+
Sbjct: 113 IGQLQKLRALDLRANQFATLPKEILQLQNLQTLNLDSNELTALPKEMRQLQKLQKLDLRE 172

Query: 226 NKIRELPPELGELK-----------------------NLVTLDLAHNHLEELPKEIGNCT 262
           N++  LP E+G+LK                       NL  L+L  N L  LPKE+    
Sbjct: 173 NQLTTLPKEIGQLKSLQTLYLRANQFATLPKEILQLQNLQALNLDSNELTALPKEMRQLQ 232

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  LDL+ N+L  +P  +G L +L  L L  N+L  +PE + K  +L +  +     ++
Sbjct: 233 KLQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLTILPEEIGKLRNLQKLYLCENRFTT 292

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LP   +  L ++ ++ L  N+ TA+P     Q  ++  +N  +N++  +P  I  + +NL
Sbjct: 293 LPKD-IGQLQNLQSLYLYGNQLTAFPK-EIEQLQNLQILNLSYNRLTTLPEEI-GQLQNL 349

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             +N+  N LT LP +LG    L  L+L   QI+   ++I  L NLE L  S   L  LP
Sbjct: 350 QILNLSYNQLTKLPKELGKLRNLKTLDLHAIQITTFPKEILQLQNLEKLNWSRTQLTTLP 409

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLIL--QSNQLVSLPRAIGHLTNLSYL 500
             IG ++ LK L+LE+N+L +LP EIG L+ L+ L L   SNQ  SLP+ IG L+NL  L
Sbjct: 410 GEIGQMQNLKELNLEKNQLTALPKEIGRLQNLEELNLNSNSNQFSSLPKEIGQLSNLKNL 469

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
            +  N L ++P+EIG L  L TL L  N+ L  +P E+    NL+ + L   PLS IP E
Sbjct: 470 HLDHNMLANLPKEIGQLSRLETLTLFRNS-LETLPEEIGQLWNLRELDLSYNPLSSIPKE 528

Query: 561 I 561
           I
Sbjct: 529 I 529



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 157/458 (34%), Positives = 247/458 (53%), Gaps = 8/458 (1%)

Query: 107 DLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSL 166
           ++ + + T L  +++    +  L L   KL++LP +IG + NL  L L +N LT LP  +
Sbjct: 31  EVEQGTYTDLTKALQNPLKVRVLNLSFQKLSTLPKEIGELQNLQTLDLFDNKLTVLPKEI 90

Query: 167 ANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDN 226
             LQ L++L L  N+L  L   + +L  L+ L LR N+  T+  +I  L NL  L++  N
Sbjct: 91  LQLQNLQMLGLCCNQLTILSEEIGQLQKLRALDLRANQFATLPKEILQLQNLQTLNLDSN 150

Query: 227 KIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           ++  LP E+ +L+ L  LDL  N L  LPKEIG    L TL L+ N+   +P  +  L N
Sbjct: 151 ELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLRANQFATLPKEILQLQN 210

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L L  N L ++P+ + +   L + ++    L++LP   +  L S+  + L  N+ T 
Sbjct: 211 LQALNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKE-IGQLKSLQTLYLLANQLTI 269

Query: 347 YPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
            P   G       +Y      N+   +P  I  + +NL  + +  N LT+ P ++     
Sbjct: 270 LPEEIGKLRNLQKLYLC---ENRFTTLPKDI-GQLQNLQSLYLYGNQLTAFPKEIEQLQN 325

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L  LNL  N+++ L E+I  L NL++L LS N L KLP  +G LR LK LDL   ++ + 
Sbjct: 326 LQILNLSYNRLTTLPEEIGQLQNLQILNLSYNQLTKLPKELGKLRNLKTLDLHAIQITTF 385

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P EI  L+ L++L     QL +LP  IG + NL  L++ +N L ++P+EIG L+NL  L 
Sbjct: 386 PKEILQLQNLEKLNWSRTQLTTLPGEIGQMQNLKELNLEKNQLTALPKEIGRLQNLEELN 445

Query: 525 LNDNT-CLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           LN N+   +++P E+   SNL+ + LD+  L+ +P EI
Sbjct: 446 LNSNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEI 483



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/343 (35%), Positives = 185/343 (53%), Gaps = 4/343 (1%)

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
           +L++   K+  LP E+GEL+NL TLDL  N L  LPKEI     L  L L  N+L  + +
Sbjct: 52  VLNLSFQKLSTLPKEIGELQNLQTLDLFDNKLTVLPKEILQLQNLQMLGLCCNQLTILSE 111

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +G L  L  L L  N+  ++P+ + +  +L   N++   L++LP  +   L  +  + L
Sbjct: 112 EIGQLQKLRALDLRANQFATLPKEILQLQNLQTLNLDSNELTALPKEM-RQLQKLQKLDL 170

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
             N+ T  P     Q  S+ ++    NQ   +P  I  + +NL  +N+  N LT+LP ++
Sbjct: 171 RENQLTTLPKE-IGQLKSLQTLYLRANQFATLPKEIL-QLQNLQALNLDSNELTALPKEM 228

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
                L +L+L  NQ++ L ++I  L +L+ L L  N L  LP  IG LR L+ L L EN
Sbjct: 229 RQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLTILPEEIGKLRNLQKLYLCEN 288

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +  +LP +IG L+ LQ L L  NQL + P+ I  L NL  L++  N L ++PEEIG L+N
Sbjct: 289 RFTTLPKDIGQLQNLQSLYLYGNQLTAFPKEIEQLQNLQILNLSYNRLTTLPEEIGQLQN 348

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           L  L L+ N  L  +P EL    NL+ + L    ++  P EI+
Sbjct: 349 LQILNLSYNQ-LTKLPKELGKLRNLKTLDLHAIQITTFPKEIL 390



 Score = 38.5 bits (88), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 1/92 (1%)

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
           F  ELQ   ++      L +A+ +   +  L++    L ++P+EIG L+NL TL L DN 
Sbjct: 23  FFAELQAEEVEQGTYTDLTKALQNPLKVRVLNLSFQKLSTLPKEIGELQNLQTLDLFDNK 82

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L  +P E+    NLQ++ L    L+ +  EI
Sbjct: 83  -LTVLPKEILQLQNLQMLGLCCNQLTILSEEI 113


>gi|359462280|ref|ZP_09250843.1| leucine-rich repeat-containing protein [Acaryochloris sp. CCMEE
           5410]
          Length = 1235

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 161/475 (33%), Positives = 253/475 (53%), Gaps = 27/475 (5%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N++ L LS + +T +P  + KLT+L  L L GN+L  +P +IG + NLT L L +N LT 
Sbjct: 44  NLIALSLSGNQLTEVPKEIGKLTNLIALSLSGNQLTEVPKEIGKLANLTQLRLHQNRLTE 103

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P+ +  L  L  L L  N+L E+P  + +L +L  LYL  N++  +  D++ L +L+ L
Sbjct: 104 VPEEIGQLASLTELSLFQNQLTEVPKEIGQLINLTELYLSQNQLMKIPKDLERLISLTKL 163

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++ E P ELG+L NL+ L L+ N L E+PKE G  T L+ L+L  N L  +P  L
Sbjct: 164 YLSQNQLTEAPKELGKLINLMELYLSQNQLTEVPKEFGQLTSLIKLNLSQNRLTGVPQEL 223

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L +LT L LS N+L  VP+ L K  +L   +++   L+ +P+ +              
Sbjct: 224 GELKSLTELHLSQNKLMEVPKELGKLTNLTWLHIDQNQLTEIPEEI-------------- 269

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                       Q T +  ++  HNQ+ ++P  +   A+ L++ ++  N L  +P ++G 
Sbjct: 270 -----------GQLTKLTELSLSHNQLKEVPKELGQLAR-LTRFSLSQNQLIEIPKEIGK 317

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L +  NQ++++  ++  LVNL  L L  N L K+P  +G + KL  L L +N+L
Sbjct: 318 IAKLIWLRIDQNQLTEVPRELSQLVNLTRLHLHQNQLTKIPKELGKVTKLTELSLSQNQL 377

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
             +P E+G L  L  L L  NQL  +P+ +G LTNL+ L +  N L  +P+E+G L +L 
Sbjct: 378 IEVPKELGQLINLVELRLNQNQLTKVPKELGKLTNLTRLHLSYNKLIEVPKELGKLASLR 437

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
            L L+ N  L  +P EL   + L I+ L N  L+   S     G      YL+ Q
Sbjct: 438 ELDLDQNQ-LTKVPKELGKLAKLVILDLSNNSLNPELSAAYEQGLETFFAYLQAQ 491



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/321 (34%), Positives = 172/321 (53%), Gaps = 8/321 (2%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLDL    L E+PKEIG  T L+ L L  N+L  +P  +G L NL  L LS N+L  VP+
Sbjct: 24  TLDLCSLKLTEVPKEIGQLTNLIALSLSGNQLTEVPKEIGKLTNLIALSLSGNQLTEVPK 83

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYS 360
            + K  +L +  +    L+ +P+  +  L S+  ++L +N+ T  P   G     T +Y 
Sbjct: 84  EIGKLANLTQLRLHQNRLTEVPEE-IGQLASLTELSLFQNQLTEVPKEIGQLINLTELY- 141

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
                NQ+ KIP  +  R  +L+K+ +  N LT  P +LG  + L EL L  NQ++++ +
Sbjct: 142 --LSQNQLMKIPKDL-ERLISLTKLYLSQNQLTEAPKELGKLINLMELYLSQNQLTEVPK 198

Query: 421 DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQ 480
           +   L +L  L LS N L  +P  +G L+ L  L L +NKL  +P E+G L  L  L + 
Sbjct: 199 EFGQLTSLIKLNLSQNRLTGVPQELGELKSLTELHLSQNKLMEVPKELGKLTNLTWLHID 258

Query: 481 SNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELAL 540
            NQL  +P  IG LT L+ LS+  N L+ +P+E+G L  L    L+ N  +  IP E+  
Sbjct: 259 QNQLTEIPEEIGQLTKLTELSLSHNQLKEVPKELGQLARLTRFSLSQNQLI-EIPKEIGK 317

Query: 541 CSNLQIMSLDNCPLSQIPSEI 561
            + L  + +D   L+++P E+
Sbjct: 318 IAKLIWLRIDQNQLTEVPREL 338


>gi|418730499|ref|ZP_13288993.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774708|gb|EKR54712.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 631

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 173/482 (35%), Positives = 256/482 (53%), Gaps = 25/482 (5%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L+LS  + T LP  +E+L +L+EL L  N+LA+ P+ I  +  L  L L+EN L  
Sbjct: 49  NVRVLNLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVM 108

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP+ +  LQ L+ L L  NKL   P  + +L +L+ L L+ N++ T+  +I  L NL  L
Sbjct: 109 LPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKL 168

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++R N++  LP E+G+L+NL TL+L  N L  LP EIG    L TL L  N+L   P  +
Sbjct: 169 NLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEI 228

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L L +NRL ++P+ + +  +L    +    L++ P   +  L  + ++ L R
Sbjct: 229 GQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKE-IGQLKKLQDLGLGR 287

Query: 342 NKFTAYPSG-GP-----------TQFTSV----------YSINFEHNQIDKIPYGIFSRA 379
           N+ T +P   G             QF +V            +N  +NQ+  +P  I  + 
Sbjct: 288 NQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEI-GQL 346

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           K L  +++  N LT+LP ++G    L  L+LGTNQ++ L ++I  L NL  L L  N L 
Sbjct: 347 KKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLT 406

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
             P  IG L  L+ LDL  N+L +LP EIG LK L+ L L  NQL + P+ IG L  L  
Sbjct: 407 TFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQD 466

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPS 559
           L +  N L  +P+EIG LE L  L L+ N  +  +P E+    NLQ++ L       +  
Sbjct: 467 LGLSYNRLVILPKEIGQLEKLQDLGLSYNRLV-ILPKEIGQLKNLQMLDLCYNQFKTVSK 525

Query: 560 EI 561
           EI
Sbjct: 526 EI 527



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 173/484 (35%), Positives = 264/484 (54%), Gaps = 27/484 (5%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L K+ +   P  + +L +L+ L L  N+LA+LP +IG + NL  L L +N LT
Sbjct: 117 QNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLT 176

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L+L+ N+L  LP+ + +L +L+ L L  N++ T   +I  L NL  
Sbjct: 177 VLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQE 236

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L+++ N++  LP E+G+LKNL  L+L+ N L   PKEIG    L  L L  N+L   P  
Sbjct: 237 LNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKE 296

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L YN+ ++V + + +  +L + N+    L++LP   +  L  + +++L 
Sbjct: 297 IGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLP-AEIGQLKKLQDLSLG 355

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN+ T  P     Q  ++Y+++   NQ+  +P  I  + KNL  + +  N LT+ P ++G
Sbjct: 356 RNQLTTLPK-EIGQLKNLYNLDLGTNQLTTLPKEI-GQLKNLYNLGLGRNQLTTFPKEIG 413

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L EL+L  N+++ L ++I  L NLE L LS N L   P  IG L+KL+ L L  N+
Sbjct: 414 QLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNR 473

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLS------------VGE---- 504
           L  LP EIG L++LQ L L  N+LV LP+ IG L NL  L             +G+    
Sbjct: 474 LVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNL 533

Query: 505 -------NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
                  N L ++P EIG L+NL+ L L  N  L  +P E+    NL  + L    L+ +
Sbjct: 534 LQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQ-LTTLPKEIGQLKNLYNLGLGTNQLTTL 592

Query: 558 PSEI 561
           P EI
Sbjct: 593 PKEI 596



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 148/415 (35%), Positives = 225/415 (54%), Gaps = 26/415 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L LS++ +T  P  + +L +L+EL L  N+L +LP +IG + NL  L L+EN LT
Sbjct: 209 QNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLT 268

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           + P  +  L++L+ L L  N+L   P  + +L +L++L L +N+ KTV  +I  L NL  
Sbjct: 269 TFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQ 328

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  N++  LP E+G+LK L  L L  N L  LPKEIG    L  LDL  N+L  +P  
Sbjct: 329 LNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKE 388

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L + P+ + +  +L E ++    L++LP   +  L ++ N+ LS
Sbjct: 389 IGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKE-IGQLKNLENLELS 447

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T +P                             + K L  + +  N L  LP ++G
Sbjct: 448 ENQLTTFPKE-------------------------IGQLKKLQDLGLSYNRLVILPKEIG 482

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L +L L  N++  L ++I  L NL++L L  N  K +   IG L+ L  L+L  N+
Sbjct: 483 QLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQ 542

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L +LP EIG LK L  L L +NQL +LP+ IG L NL  L +G N L ++P+EIG
Sbjct: 543 LATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 597



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 161/331 (48%), Gaps = 25/331 (7%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  L+L       +P  +  L NL  L L  N+L + P  + +   L  
Sbjct: 39  DLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLES 98

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            ++    L  LP+  +  L ++  + L +NK   +P     Q  ++ ++N + NQ+  +P
Sbjct: 99  LDLSENRLVMLPNE-IGRLQNLQELGLYKNKLITFPK-EIGQLRNLQTLNLQDNQLATLP 156

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + +NL K+N++ N LT LP ++G    L  LNL  NQ++ L  +I  L NL+ L 
Sbjct: 157 VEI-GQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLG 215

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           LS N L   P  IG L  L+ L+L+ N+L +LP EIG LK L+ L L  NQL + P+ IG
Sbjct: 216 LSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIG 275

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC---------------------- 530
            L  L  L +G N L + P+EIG L+NL  L L  N                        
Sbjct: 276 QLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQ 335

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  +P E+     LQ +SL    L+ +P EI
Sbjct: 336 LATLPAEIGQLKKLQDLSLGRNQLTTLPKEI 366


>gi|410451688|ref|ZP_11305690.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014454|gb|EKO76584.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 511

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 167/461 (36%), Positives = 256/461 (55%), Gaps = 27/461 (5%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++ NLDL  + +T  P  +  L +L+ L L  N+L +LP +I  +  L  L L+EN L +
Sbjct: 39  DVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKT 98

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  LQ L VLDL  N+L  LP  + KL SLK L+L  N++ T+  +I  L +L  L
Sbjct: 99  LPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEEL 158

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++ +N++R LP E+G L++L  L++ +N L  LP+EIG    L +L+L++N LV +P  +
Sbjct: 159 NLANNQLRILPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEI 218

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  L  L L+ N+L ++P+ + K   L    +    L SLP   +  L ++  + L  
Sbjct: 219 GALQKLEWLYLTNNQLATLPKEIGKLQKLEWLGLTNNQLKSLPQE-IGKLQNLKELILEN 277

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+  ++P                  +I  +P        NL +++++ N  T+LP ++GT
Sbjct: 278 NRLESFPK-----------------EIGTLP--------NLQRLHLEYNRFTTLPQEIGT 312

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  LNL  NQ++ L ++I  L  LE L L NN L  LP  IG L+KL+ L L  N+L
Sbjct: 313 LHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQL 372

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            +LP EIG L+ L+ L L+ NQL +LP AIG L  L +LS+  N L ++PEEIGTL+ + 
Sbjct: 373 ATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIV 432

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
            L L +N  L  +P  +    +L+ + L   P +  P EIV
Sbjct: 433 KLNLANNQ-LRTLPQGIGQLQSLKDLDLSGNPFTTFPKEIV 472



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 156/427 (36%), Positives = 246/427 (57%), Gaps = 3/427 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L+ + +  LP  +E L  L+ LYL  N+L +LP +IG + NL  L L +N L 
Sbjct: 61  QNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDLYKNQLR 120

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L+ L L HN+L  LP  +  L  L+ L L  N+++ +  +I  L +L  
Sbjct: 121 TLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEELNLANNQLRILPKEIGTLQHLQD 180

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++ +N++  LP E+G L+NL +L+L +N L  LPKEIG    L  L L +N+L  +P  
Sbjct: 181 LNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPKE 240

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L  L  L L+ N+L+S+P+ + K  +L E  +E   L S P   + +L ++  + L 
Sbjct: 241 IGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKE-IGTLPNLQRLHLE 299

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+FT  P    T    +  +N EHNQ+  +P  I  R + L  +N+ +N L +LP ++G
Sbjct: 300 YNRFTTLPQEIGT-LHRLPWLNLEHNQLTTLPQEI-GRLERLEWLNLYNNRLATLPKEIG 357

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
           T   L  L L  NQ++ L ++I  L NL+ L L  N L  LP +IG L++L+ L L+ N+
Sbjct: 358 TLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQ 417

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L +LP EIG L+++ +L L +NQL +LP+ IG L +L  L +  N   + P+EI  L++L
Sbjct: 418 LTTLPEEIGTLQKIVKLNLANNQLRTLPQGIGQLQSLKDLDLSGNPFTTFPKEIVGLKHL 477

Query: 521 HTLYLND 527
             L L +
Sbjct: 478 QMLKLKN 484



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 146/402 (36%), Positives = 219/402 (54%), Gaps = 12/402 (2%)

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           ++L N   +R LDL +N+L   P  +  L +LK L L  N++KT+  +I+ L  L  L +
Sbjct: 32  EALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYL 91

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
            +N+++ LP E+G L+NL  LDL  N L  LP EIG    L  L L+HN+L+ +P  +G 
Sbjct: 92  SENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGT 151

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSR 341
           L +L  L L+ N+L  +P+ +    HL + NV    L +LP   G L +L S+N   L  
Sbjct: 152 LQDLEELNLANNQLRILPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLQSLN---LEN 208

Query: 342 NKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           N+    P   G   +   +Y  N   NQ+  +P  I  + + L  + + +N L SLP ++
Sbjct: 209 NRLVTLPKEIGALQKLEWLYLTN---NQLATLPKEI-GKLQKLEWLGLTNNQLKSLPQEI 264

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G    L EL L  N++    ++I  L NL+ L L  N    LP  IG L +L  L+LE N
Sbjct: 265 GKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHN 324

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L +LP EIG L+ L+ L L +N+L +LP+ IG L  L +L +  N L ++P+EIG L+N
Sbjct: 325 QLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPKEIGQLQN 384

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L L  N  L  +P  +     L+ +SL N  L+ +P EI
Sbjct: 385 LKDLDLEYNQ-LATLPEAIGTLQRLEWLSLKNNQLTTLPEEI 425



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 86/144 (59%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
            +E ++N +++  L L NN L   P  IG L+ LK L L  N+L++LP EI  L++L+ L
Sbjct: 30  FNEALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWL 89

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L  NQL +LP+ IG L NL  L + +N L+++P EIG L +L  L+L  N  +  +P E
Sbjct: 90  YLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLI-TLPQE 148

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    +L+ ++L N  L  +P EI
Sbjct: 149 IGTLQDLEELNLANNQLRILPKEI 172


>gi|421118971|ref|ZP_15579298.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348311|gb|EKO99137.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 498

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 161/420 (38%), Positives = 238/420 (56%), Gaps = 3/420 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL    +T LP  + +L +L+ L L  N L  LP +IG + NL  L L+ NSLT+LP  
Sbjct: 53  LDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L+L   KL  LP  + +L +L+ L L FN + T+  ++  L NL  L +  
Sbjct: 113 VGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQ 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL  LDL  N L  LPKEI     L  LDL  N+L  +P  +G L 
Sbjct: 173 NRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L   +L ++P+ + +  +L   N+    L++LP   +  L ++  + L  N+ T
Sbjct: 233 NLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKE-IGELQNLEILVLRENRIT 291

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           A P     Q  ++  ++   NQ+  +P  I  + +NL ++++  N LT+LP ++G    L
Sbjct: 292 ALPK-EIGQLQNLQWLDLHQNQLTILPKEI-GQLQNLQRLDLHQNQLTTLPKEIGQLQNL 349

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            EL L  NQ++ L ++I+ L NL VL L NN L  LP  +  L+ L+ L L  N+L +LP
Sbjct: 350 QELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLP 409

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            EIG L+ LQ L L SNQL +LP+ IG L NL  L + EN L + P+EI  L+NL  L+L
Sbjct: 410 KEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHL 469



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 151/402 (37%), Positives = 217/402 (53%), Gaps = 27/402 (6%)

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           T L  +L N  ++R LDLR+ KL  LP  + +L +L+ L L FN +  +  +I  L NL 
Sbjct: 38  TDLAKTLQNPLKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQ 97

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L +  N +  LP E+G+L+NL  L+L    L  LPKEIG    L  LDL  N L  +P 
Sbjct: 98  ELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPK 157

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +G L NL RL L  NRL ++P  + +  +L E ++    L++LP  +   L ++  + L
Sbjct: 158 EVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEI-RQLRNLQELDL 216

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
            RN+ T  P                             + +NL  +N+    LT+LP ++
Sbjct: 217 HRNQLTTLPKE-------------------------IGQLQNLKTLNLIVTQLTTLPKEI 251

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G    L  LNL  NQ++ L ++I  L NLE+LVL  N +  LP  IG L+ L+ LDL +N
Sbjct: 252 GELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQN 311

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L  LP EIG L+ LQRL L  NQL +LP+ IG L NL  L + EN L ++P+EI  L+N
Sbjct: 312 QLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQN 371

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L L DN  L  +P E+    +LQ+++L +  LS +P EI
Sbjct: 372 LRVLDL-DNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEI 412



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 162/446 (36%), Positives = 240/446 (53%), Gaps = 6/446 (1%)

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
            + T L  +++    +  L L   KL  LP +IG + NL  L L+ NSLT LP  +  L+
Sbjct: 35  GTYTDLAKTLQNPLKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLR 94

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
            L+ LDL  N L  LP  V +L +L+ L L   ++ T+  +I  L NL  L +  N +  
Sbjct: 95  NLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTT 154

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+G+L+NL  LDL  N L  LP EIG    L  LDL  N+L  +P  +  L NL  L
Sbjct: 155 LPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQEL 214

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L  N+L ++P+ + +  +L   N+    L++LP   +  L ++  + L  N+ T  P  
Sbjct: 215 DLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKE-IGELQNLKTLNLLDNQLTTLPKE 273

Query: 351 -GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
            G  Q   +  +    N+I  +P  I  + +NL  +++  N LT LP ++G    L  L+
Sbjct: 274 IGELQNLEILVL--RENRITALPKEI-GQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLD 330

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           L  NQ++ L ++I  L NL+ L L  N L  LP  I  L+ L+ LDL+ N+L +LP E+ 
Sbjct: 331 LHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVL 390

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            L+ LQ L L SN+L +LP+ IG L NL  L++  N L ++P+EIG L+NL  L L++N 
Sbjct: 391 RLQSLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQ 450

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLS 555
            L   P E+    NLQ + L   PLS
Sbjct: 451 -LTTFPKEIRQLKNLQELHLYLNPLS 475



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 151/413 (36%), Positives = 231/413 (55%), Gaps = 8/413 (1%)

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L    LT LP  +  LQ L+ LDL  N L  LP  + +L +L+ L L FN + T+  
Sbjct: 52  TLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPK 111

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           ++  L NL  L++   K+  LP E+G+L+NL  LDL+ N L  LPKE+G    L  LDL 
Sbjct: 112 EVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLH 171

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLL 328
            N L  +P  +G L NL  L L+ N+L ++P+ + +  +L E ++    L++LP   G L
Sbjct: 172 QNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQL 231

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
            +L ++N I     + T  P     +  ++ ++N   NQ+  +P  I    +NL  + ++
Sbjct: 232 QNLKTLNLIV---TQLTTLPKE-IGELQNLKTLNLLDNQLTTLPKEI-GELQNLEILVLR 286

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
           +N +T+LP ++G    L  L+L  NQ++ L ++I  L NL+ L L  N L  LP  IG L
Sbjct: 287 ENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQL 346

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
           + L+ L L+EN+L +LP EI  L+ L+ L L +NQL +LP+ +  L +L  L++G N L 
Sbjct: 347 QNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLS 406

Query: 509 SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           ++P+EIG L+NL  L L  N  L  +P E+    NLQ + LD   L+  P EI
Sbjct: 407 TLPKEIGQLQNLQVLALISNQ-LTTLPKEIGQLQNLQELCLDENQLTTFPKEI 458



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 146/408 (35%), Positives = 224/408 (54%), Gaps = 26/408 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS +S+T LP  V +L +L+ L L   KL +LP +IG + NL  L L+ NSLT+
Sbjct: 95  NLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTT 154

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L+ L+ LDL  N+L  LPM + +L +L+ L L  N++ T+  +I+ L NL  L
Sbjct: 155 LPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQEL 214

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  LP E+G+L+NL TL+L    L  LPKEIG    L TL+L  N+L  +P  +
Sbjct: 215 DLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI 274

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L L  NR+ ++P+ + +  +L   ++    L+ LP  +              
Sbjct: 275 GELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEI-------------- 320

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                       Q  ++  ++   NQ+  +P  I  + +NL ++ + +N LT+LP ++  
Sbjct: 321 -----------GQLQNLQRLDLHQNQLTTLPKEI-GQLQNLQELCLDENQLTTLPKEIEQ 368

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L+L  NQ++ L +++  L +L+VL L +N L  LP  IG L+ L+ L L  N+L
Sbjct: 369 LQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQL 428

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            +LP EIG L+ LQ L L  NQL + P+ I  L NL  L +  N L S
Sbjct: 429 TTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 476



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/342 (36%), Positives = 199/342 (58%), Gaps = 4/342 (1%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +R  K+  LP E+G+L+NL  LDL+ N L  LPKEIG    L  LDL  N L  +P  
Sbjct: 53  LDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL RL L+  +L ++P+ + +  +L E ++   +L++LP  +   L ++  + L 
Sbjct: 113 VGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEV-GQLENLQRLDLH 171

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           +N+    P     Q  ++  ++   N++  +P  I  + +NL ++++  N LT+LP ++G
Sbjct: 172 QNRLATLPME-IGQLKNLQELDLNSNKLTTLPKEI-RQLRNLQELDLHRNQLTTLPKEIG 229

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  LNL   Q++ L ++I  L NL+ L L +N L  LP  IG L+ L+ L L EN+
Sbjct: 230 QLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENR 289

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           + +LP EIG L+ LQ L L  NQL  LP+ IG L NL  L + +N L ++P+EIG L+NL
Sbjct: 290 ITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNL 349

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L L++N  L  +P E+    NL+++ LDN  L+ +P E++
Sbjct: 350 QELCLDENQ-LTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVL 390



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 97/174 (55%), Gaps = 23/174 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL ++ +T LP  + +L +L+ L L+ N+L +LP +IG + NL  L L EN LT
Sbjct: 301 QNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLT 360

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ LRVLDL +N+L  LP  V +L SL++L L  NR+ T+  +I  L NL +
Sbjct: 361 TLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQV 420

Query: 221 LSMRDNKIRELPPELG-----------------------ELKNLVTLDLAHNHL 251
           L++  N++  LP E+G                       +LKNL  L L  N L
Sbjct: 421 LALISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 474


>gi|24215150|ref|NP_712631.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074468|ref|YP_005988785.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196220|gb|AAN49649.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458257|gb|AER02802.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 633

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 173/482 (35%), Positives = 256/482 (53%), Gaps = 25/482 (5%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L+LS  + T LP  +E+L +L+EL L  N+LA+ P+ I  +  L  L L+EN L  
Sbjct: 51  NVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVM 110

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP+ +  LQ L+ L L  NKL   P  + +L +L+ L L+ N++ T+  +I  L NL  L
Sbjct: 111 LPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKL 170

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++R N++  LP E+G+L+NL TL+L  N L  LP EIG    L TL L  N+L   P  +
Sbjct: 171 NLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEI 230

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L L +NRL ++P+ + +  +L    +    L++ P   +  L  + ++ L R
Sbjct: 231 GQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKE-IGQLKKLRDLGLGR 289

Query: 342 NKFTAYPSG-GP-----------TQFTSV----------YSINFEHNQIDKIPYGIFSRA 379
           N+ T +P   G             QF +V            +N  +NQ+  +P  I  + 
Sbjct: 290 NQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEI-GQL 348

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           K L  +++  N LT+LP ++G    L  L+LGTNQ++ L ++I  L NL  L L  N L 
Sbjct: 349 KKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLA 408

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
             P  IG L  L+ LDL  N+L +LP EIG LK L+ L L  NQL + P+ IG L  L  
Sbjct: 409 TFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQD 468

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPS 559
           L +  N L  +P+EIG LE L  L L+ N  +  +P E+    NLQ++ L       +  
Sbjct: 469 LGLSYNRLVILPKEIGQLEKLQDLGLSYNRLV-ILPKEIGQLKNLQMLDLCYNQFKTVSK 527

Query: 560 EI 561
           EI
Sbjct: 528 EI 529



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 167/485 (34%), Positives = 255/485 (52%), Gaps = 50/485 (10%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L K+ +   P  + +L +L+ L L  N+LA+LP +IG + NL  L L +N LT
Sbjct: 119 QNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLT 178

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L+L+ N+L  LP+ + +L +L+ L L  N++ T   +I  L NL  
Sbjct: 179 VLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQE 238

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L+++ N++  LP E+G+LKNL  L+L+ N L   PKEIG    L  L L  N+L   P  
Sbjct: 239 LNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLRDLGLGRNQLTTFPKE 298

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L YN+ ++V + + +  +L + N+    L++LP   +  L  + +++L 
Sbjct: 299 IGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLP-AEIGQLKKLQDLSLG 357

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN+ T  P     Q  ++Y+++   NQ+  +P  I  + KNL  + +  N L + P ++G
Sbjct: 358 RNQLTTLPKE-IGQLKNLYNLDLGTNQLTTLPKEI-GQLKNLYNLGLGRNQLATFPKEIG 415

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L EL+L  N+++ L ++I  L NLE L LS N L   P  IG L+KL+ L L  N+
Sbjct: 416 QLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNR 475

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL----------------------- 497
           L  LP EIG L++LQ L L  N+LV LP+ IG L NL                       
Sbjct: 476 LVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNL 535

Query: 498 -----SY------------------LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
                SY                  L +G N L ++P+EIG L+NL+ L L  N  L  +
Sbjct: 536 LQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQ-LTTL 594

Query: 535 PFELA 539
           P E+ 
Sbjct: 595 PKEIG 599



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 90/167 (53%), Gaps = 24/167 (14%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN-------------KLES- 463
           L+E +QN +N+ VL LS      LP  I  L+ L+ LDL +N             KLES 
Sbjct: 42  LTEALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESL 101

Query: 464 ---------LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
                    LPNEIG L+ LQ L L  N+L++ P+ IG L NL  L++ +N L ++P EI
Sbjct: 102 DLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEI 161

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           G L+NL  L L  N  L  +P E+    NLQ ++L +  L+ +P EI
Sbjct: 162 GQLQNLEKLNLRKNR-LTVLPKEIGQLQNLQTLNLQDNQLATLPVEI 207



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 63/123 (51%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N   ++ L+L      +LP EI  LK LQ L L  NQL + P  I  L  L 
Sbjct: 40  RDLTEALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLE 99

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L + EN L  +P EIG L+NL  L L  N  +   P E+    NLQ ++L +  L+ +P
Sbjct: 100 SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLI-TFPKEIGQLQNLQTLNLQDNQLATLP 158

Query: 559 SEI 561
            EI
Sbjct: 159 VEI 161


>gi|418701699|ref|ZP_13262621.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759263|gb|EKR25478.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 498

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 161/420 (38%), Positives = 238/420 (56%), Gaps = 3/420 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL    +T LP  + +L +L+ L L  N L  LP +IG + NL  L L+ NSLT+LP  
Sbjct: 53  LDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L+L   KL  LP  + +L +L+ L L FN + T+  ++  L NL  L +  
Sbjct: 113 VGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQ 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL  LDL  N L  LPKEI     L  LDL  N+L  +P  +G L 
Sbjct: 173 NRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L   +L ++P+ + +  +L   N+    L++LP   +  L ++  + L  N+ T
Sbjct: 233 NLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKE-IGELQNLEILVLRENRIT 291

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           A P     Q  ++  ++   NQ+  +P  I  + +NL ++++  N LT+LP ++G    L
Sbjct: 292 ALPK-EIGQLQNLQWLDLHQNQLTTLPKEI-GQLQNLQRLDLHQNQLTTLPKEIGQLQNL 349

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            EL L  NQ++ L ++I+ L NL VL L NN L  LP  +  L+ L+ L L  N+L +LP
Sbjct: 350 QELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLP 409

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            EIG L+ LQ L L SNQL +LP+ IG L NL  L + EN L + P+EI  L+NL  L+L
Sbjct: 410 KEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHL 469



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 151/402 (37%), Positives = 218/402 (54%), Gaps = 27/402 (6%)

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           T L  +L N  ++R LDLR+ KL  LP  + +L +L+ L L FN +  +  +I  L NL 
Sbjct: 38  TDLAKALQNPLKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQ 97

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L +  N +  LP E+G+L+NL  L+L    L  LPKEIG    L  LDL  N L  +P 
Sbjct: 98  ELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPK 157

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +G L NL RL L  NRL ++P  + +  +L E ++    L++LP  +   L ++  + L
Sbjct: 158 EVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEI-RQLRNLQELDL 216

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
            RN+ T  P                             + +NL  +N+    LT+LP ++
Sbjct: 217 HRNQLTTLPKE-------------------------IGQLQNLKTLNLIVTQLTTLPKEI 251

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G    L  LNL  NQ++ L ++I  L NLE+LVL  N +  LP  IG L+ L+ LDL +N
Sbjct: 252 GELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQN 311

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L +LP EIG L+ LQRL L  NQL +LP+ IG L NL  L + EN L ++P+EI  L+N
Sbjct: 312 QLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQN 371

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L L DN  L  +P E+    +LQ+++L +  LS +P EI
Sbjct: 372 LRVLDL-DNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEI 412



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 162/446 (36%), Positives = 240/446 (53%), Gaps = 6/446 (1%)

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
            + T L  +++    +  L L   KL  LP +IG + NL  L L+ NSLT LP  +  L+
Sbjct: 35  GTYTDLAKALQNPLKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLR 94

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
            L+ LDL  N L  LP  V +L +L+ L L   ++ T+  +I  L NL  L +  N +  
Sbjct: 95  NLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTT 154

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+G+L+NL  LDL  N L  LP EIG    L  LDL  N+L  +P  +  L NL  L
Sbjct: 155 LPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQEL 214

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L  N+L ++P+ + +  +L   N+    L++LP   +  L ++  + L  N+ T  P  
Sbjct: 215 DLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKE-IGELQNLKTLNLLDNQLTTLPKE 273

Query: 351 -GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
            G  Q   +  +    N+I  +P  I  + +NL  +++  N LT+LP ++G    L  L+
Sbjct: 274 IGELQNLEILVL--RENRITALPKEI-GQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLD 330

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           L  NQ++ L ++I  L NL+ L L  N L  LP  I  L+ L+ LDL+ N+L +LP E+ 
Sbjct: 331 LHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVL 390

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            L+ LQ L L SN+L +LP+ IG L NL  L +  N L ++P+EIG L+NL  L L++N 
Sbjct: 391 RLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQ 450

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLS 555
            L   P E+    NLQ + L   PLS
Sbjct: 451 -LTTFPKEIRQLKNLQELHLYLNPLS 475



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 151/413 (36%), Positives = 231/413 (55%), Gaps = 8/413 (1%)

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L    LT LP  +  LQ L+ LDL  N L  LP  + +L +L+ L L FN + T+  
Sbjct: 52  TLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPK 111

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           ++  L NL  L++   K+  LP E+G+L+NL  LDL+ N L  LPKE+G    L  LDL 
Sbjct: 112 EVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLH 171

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLL 328
            N L  +P  +G L NL  L L+ N+L ++P+ + +  +L E ++    L++LP   G L
Sbjct: 172 QNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQL 231

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
            +L ++N I     + T  P     +  ++ ++N   NQ+  +P  I    +NL  + ++
Sbjct: 232 QNLKTLNLIV---TQLTTLPKE-IGELQNLKTLNLLDNQLTTLPKEI-GELQNLEILVLR 286

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
           +N +T+LP ++G    L  L+L  NQ++ L ++I  L NL+ L L  N L  LP  IG L
Sbjct: 287 ENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQL 346

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
           + L+ L L+EN+L +LP EI  L+ L+ L L +NQL +LP+ +  L +L  L++G N L 
Sbjct: 347 QNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLS 406

Query: 509 SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           ++P+EIG L+NL  L L  N  L  +P E+    NLQ + LD   L+  P EI
Sbjct: 407 TLPKEIGQLQNLQVLGLISNQ-LTTLPKEIGQLQNLQELCLDENQLTTFPKEI 458



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 146/408 (35%), Positives = 225/408 (55%), Gaps = 26/408 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS +S+T LP  V +L +L+ L L   KL +LP +IG + NL  L L+ NSLT+
Sbjct: 95  NLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTT 154

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L+ L+ LDL  N+L  LPM + +L +L+ L L  N++ T+  +I+ L NL  L
Sbjct: 155 LPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQEL 214

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  LP E+G+L+NL TL+L    L  LPKEIG    L TL+L  N+L  +P  +
Sbjct: 215 DLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI 274

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L L  NR+ ++P+ + +  +L   ++    L++LP  +              
Sbjct: 275 GELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEI-------------- 320

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                       Q  ++  ++   NQ+  +P  I  + +NL ++ + +N LT+LP ++  
Sbjct: 321 -----------GQLQNLQRLDLHQNQLTTLPKEI-GQLQNLQELCLDENQLTTLPKEIEQ 368

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L+L  NQ++ L +++  L +L+VL L +N L  LP  IG L+ L+ L L  N+L
Sbjct: 369 LQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQL 428

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            +LP EIG L+ LQ L L  NQL + P+ I  L NL  L +  N L S
Sbjct: 429 TTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 476



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/342 (36%), Positives = 200/342 (58%), Gaps = 4/342 (1%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +R  K+  LP E+G+L+NL  LDL+ N L  LPKEIG    L  LDL  N L  +P  
Sbjct: 53  LDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL RL L+  +L ++P+ + +  +L E ++   +L++LP  +   L ++  + L 
Sbjct: 113 VGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEV-GQLENLQRLDLH 171

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           +N+    P     Q  ++  ++   N++  +P  I  + +NL ++++  N LT+LP ++G
Sbjct: 172 QNRLATLPME-IGQLKNLQELDLNSNKLTTLPKEI-RQLRNLQELDLHRNQLTTLPKEIG 229

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  LNL   Q++ L ++I  L NL+ L L +N L  LP  IG L+ L+ L L EN+
Sbjct: 230 QLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENR 289

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           + +LP EIG L+ LQ L L  NQL +LP+ IG L NL  L + +N L ++P+EIG L+NL
Sbjct: 290 ITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNL 349

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L L++N  L  +P E+    NL+++ LDN  L+ +P E++
Sbjct: 350 QELCLDENQ-LTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVL 390



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 96/174 (55%), Gaps = 23/174 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL ++ +T LP  + +L +L+ L L+ N+L +LP +IG + NL  L L EN LT
Sbjct: 301 QNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLT 360

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ LRVLDL +N+L  LP  V +L SL++L L  NR+ T+  +I  L NL +
Sbjct: 361 TLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQV 420

Query: 221 LSMRDNKIRELPPELG-----------------------ELKNLVTLDLAHNHL 251
           L +  N++  LP E+G                       +LKNL  L L  N L
Sbjct: 421 LGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 474


>gi|422002277|ref|ZP_16349515.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417259209|gb|EKT88588.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 533

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 165/462 (35%), Positives = 258/462 (55%), Gaps = 6/462 (1%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++ NLDL  + +T  P  +  L +L+ L L  N+L +LP +I  +  L  L L+EN L +
Sbjct: 39  DVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKT 98

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  LQ L VLDL  N+L  LP  + KL SL+ L+L  N++ T+  +I  L +L  L
Sbjct: 99  LPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEHNQLITLPQEIGTLQDLEEL 158

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++ +N++R L  E+G L++L  L + +N L  LP+EIG    L  L L +N+L  +P  +
Sbjct: 159 NLANNQLRILSKEIGTLQHLQDLSVFNNQLITLPQEIGKLQNLKYLRLAYNQLTTLPKEI 218

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L +  N+L ++P+ +    +L   N+    L +LP   + +L  +  + L+ 
Sbjct: 219 GRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLVTLPKE-IGTLQKLEWLYLTN 277

Query: 342 NKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           N+    P   G  Q   +  +   +NQ+  +P  I  + +NL ++ +++N L S P ++G
Sbjct: 278 NQLATLPQEIGKLQ--KLEWLGLTNNQLKSLPQEI-GKLQNLKELILENNRLESFPKEIG 334

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
           T   L  L+L  N+ + L E+I  L  L  L L +N L  LP  IG L +L+ L+L  N+
Sbjct: 335 TLSNLQRLHLEYNRFTTLPEEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNR 394

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L +LP EIG L++LQ L L +NQL +LP+ IG L NL  L + +N L ++PEEIGTL+ L
Sbjct: 395 LATLPKEIGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRL 454

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L L +N  L  +  E+    NL+ + L   P +  P EIV
Sbjct: 455 EWLSLKNNQ-LRTLSQEIGQLQNLKDLDLSGNPFTTFPQEIV 495



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 152/414 (36%), Positives = 234/414 (56%), Gaps = 26/414 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL K+ +  LP  + KL  LE L+L  N+L +LP +IG + +L  L LA N L 
Sbjct: 107 QNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEHNQLITLPQEIGTLQDLEELNLANNQLR 166

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L   +  LQ L+ L + +N+L  LP  + KL +LK L L +N++ T+  +I  L NL  
Sbjct: 167 ILSKEIGTLQHLQDLSVFNNQLITLPQEIGKLQNLKYLRLAYNQLTTLPKEIGRLENLQD 226

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++ +N++  LP E+G L+NL +L+LA+N L  LPKEIG    L  L L +N+L  +P  
Sbjct: 227 LNIFNNQLITLPQEIGTLQNLQSLNLANNRLVTLPKEIGTLQKLEWLYLTNNQLATLPQE 286

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L  L  L L+ N+L+S+P+ + K  +L E  +E   L S P   + +L+++  + L 
Sbjct: 287 IGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKE-IGTLSNLQRLHLE 345

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+FT  P               E   + ++P+           +N++ N LT+LP ++G
Sbjct: 346 YNRFTTLPE--------------EIGTLHRLPW-----------LNLEHNQLTTLPQEIG 380

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  LNL  N+++ L ++I  L  L+ L L+NN L  LP  IG L+ LK LDL +N+
Sbjct: 381 RLERLEWLNLYNNRLATLPKEIGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQ 440

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           L +LP EIG L+ L+ L L++NQL +L + IG L NL  L +  N   + P+EI
Sbjct: 441 LVTLPEEIGTLQRLEWLSLKNNQLRTLSQEIGQLQNLKDLDLSGNPFTTFPQEI 494



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 149/398 (37%), Positives = 224/398 (56%), Gaps = 4/398 (1%)

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           ++L N   +R LDL +N+L   P  +  L +LK L L  N++KT+  +I+ L  L  L +
Sbjct: 32  EALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYL 91

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
            +N+++ LP E+G L+NL  LDL  N L  LP EIG    L  L L+HN+L+ +P  +G 
Sbjct: 92  SENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEHNQLITLPQEIGT 151

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L +L  L L+ N+L  + + +    HL + +V    L +LP   +  L ++  + L+ N+
Sbjct: 152 LQDLEELNLANNQLRILSKEIGTLQHLQDLSVFNNQLITLPQE-IGKLQNLKYLRLAYNQ 210

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
            T  P     +  ++  +N  +NQ+  +P  I    +NL  +N+ +N L +LP ++GT  
Sbjct: 211 LTTLPK-EIGRLENLQDLNIFNNQLITLPQEI-GTLQNLQSLNLANNRLVTLPKEIGTLQ 268

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            L  L L  NQ++ L ++I  L  LE L L+NN LK LP  IG L+ LK L LE N+LES
Sbjct: 269 KLEWLYLTNNQLATLPQEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLES 328

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
            P EIG L  LQRL L+ N+  +LP  IG L  L +L++  N L ++P+EIG LE L  L
Sbjct: 329 FPKEIGTLSNLQRLHLEYNRFTTLPEEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWL 388

Query: 524 YLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L +N  L  +P E+     LQ + L N  L+ +P EI
Sbjct: 389 NLYNNR-LATLPKEIGTLRKLQHLYLANNQLATLPKEI 425



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 161/298 (54%), Gaps = 3/298 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L L+ + +T LP  + +L +L++L ++ N+L +LP +IG + NL  L LA N 
Sbjct: 197 KLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNR 256

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L +LP  +  LQ+L  L L +N+L  LP  + KL  L+ L L  N++K++  +I  L NL
Sbjct: 257 LVTLPKEIGTLQKLEWLYLTNNQLATLPQEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNL 316

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L + +N++   P E+G L NL  L L +N    LP+EIG    L  L+L+HN+L  +P
Sbjct: 317 KELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPEEIGTLHRLPWLNLEHNQLTTLP 376

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L  L  L L  NRL ++P+ +     L    +    L++LP   +  L ++ ++ 
Sbjct: 377 QEIGRLERLEWLNLYNNRLATLPKEIGTLRKLQHLYLANNQLATLPKE-IGQLQNLKDLD 435

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           LS N+    P    T    +  ++ ++NQ+  +   I  + +NL  +++  N  T+ P
Sbjct: 436 LSDNQLVTLPEEIGT-LQRLEWLSLKNNQLRTLSQEI-GQLQNLKDLDLSGNPFTTFP 491



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 85/144 (59%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
            +E ++N +++  L L NN L   P  IG L+ LK L L  N+L++LP EI  L++L+ L
Sbjct: 30  FNEALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWL 89

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L  NQL +LP+ IG L NL  L + +N L+++P EIG L +L  L+L  N  +  +P E
Sbjct: 90  YLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEHNQLI-TLPQE 148

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    +L+ ++L N  L  +  EI
Sbjct: 149 IGTLQDLEELNLANNQLRILSKEI 172


>gi|418688840|ref|ZP_13249975.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361998|gb|EJP17951.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 492

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 161/427 (37%), Positives = 249/427 (58%), Gaps = 4/427 (0%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L   KL +LP +I  + NL  L L  N LT+LP  +  L+ L++L L +N+L  LP  
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +LK+L+L  N++ T+  +I+ L NL ML + +N++  LP E+G+L+NL  L L++
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSY 170

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L  LPKEIG    L  L L  ++L  +P  +G L NL  L L  ++L  +P+ + K  
Sbjct: 171 NQLTTLPKEIGKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQ 230

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L+E ++    L+ LP   +  L  +  + L +N+ T  P     Q  ++ S+N  +NQI
Sbjct: 231 NLHELDLSHNQLTILPKE-IGQLQKLQWLYLPKNQLTTLPQ-EIGQLKNLKSLNLSYNQI 288

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
             IP  I  + + L  + + +N LT+LP ++G    L  L+L TN+++ L ++I +L NL
Sbjct: 289 KTIPKEI-EKLQKLQSLYLPNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNL 347

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L L +N L  LP+ IG L+ L+ L+L  N+L +L  EI  L+ L+ L L+SNQL   P
Sbjct: 348 QDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFP 407

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMS 548
           + IG L NL  L +G N L ++PE IG L+NL TL L+ N  L  +P E+    NLQ + 
Sbjct: 408 KEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQ-LTTLPQEIGQLQNLQELF 466

Query: 549 LDNCPLS 555
           L+N  LS
Sbjct: 467 LNNNQLS 473



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 156/428 (36%), Positives = 238/428 (55%), Gaps = 26/428 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  + +L +L+ L LY N+L +LP +IG + NL  L L  N LT
Sbjct: 69  QNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLT 128

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L++LDL +N+L  LP  + +L +L+ LYL +N++ T+  +I  L NL +
Sbjct: 129 TLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQL 188

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+ ++++  LP E+G+L+NL  L L  + L  LP+EIG    L  LDL HN+L  +P  
Sbjct: 189 LSLYESQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKE 248

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L  L  L L  N+L ++P+ + +  +L   N+    + ++P   +  L  + ++ L 
Sbjct: 249 IGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKE-IEKLQKLQSLYLP 307

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL  +++  N LT+LP ++G
Sbjct: 308 NNQLTTLPQE-------------------------IGQLQNLQSLDLSTNRLTTLPQEIG 342

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L +L L +NQ++ L  +I  L NL+ L L NN L  L   I  L+ LK LDL  N+
Sbjct: 343 HLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQ 402

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L   P EIG LK LQ L L SNQL +LP  IG L NL  L +  N L ++P+EIG L+NL
Sbjct: 403 LTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNL 462

Query: 521 HTLYLNDN 528
             L+LN+N
Sbjct: 463 QELFLNNN 470



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 152/420 (36%), Positives = 231/420 (55%), Gaps = 8/420 (1%)

Query: 145 YVTNLTCLGLAE--NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           +  +L+C   AE   +   L  +L N   +RVL L   KL  LP  + +L +LK+L L  
Sbjct: 19  FFIHLSCEIQAEEPGTYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGH 78

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N++  +  +I  L NL +L +  N++  LP E+G+LKNL  L L +N L  LP EI    
Sbjct: 79  NQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLK 138

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  LDL +N+L  +P  +G L NL  L LSYN+L ++P+ + K  +L   ++    L++
Sbjct: 139 NLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTT 198

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
           LP   +  L ++  ++L  ++ T  P   G  Q  +++ ++  HNQ+  +P  I  + + 
Sbjct: 199 LPKE-IGKLENLQLLSLYESQLTILPQEIGKLQ--NLHELDLSHNQLTILPKEI-GQLQK 254

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           L  + +  N LT+LP ++G    L  LNL  NQI  + ++I+ L  L+ L L NN L  L
Sbjct: 255 LQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLYLPNNQLTTL 314

Query: 442 PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLS 501
           P  IG L+ L+ LDL  N+L +LP EIG L+ LQ L L SNQL  LP  IG L NL  L+
Sbjct: 315 PQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLN 374

Query: 502 VGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +  N L ++ +EI  L+NL +L L  N  L   P E+    NLQ++ L +  L+ +P  I
Sbjct: 375 LRNNRLTTLSKEIEQLQNLKSLDLRSNQ-LTIFPKEIGQLKNLQVLDLGSNQLTTLPEGI 433



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/318 (36%), Positives = 174/318 (54%), Gaps = 26/318 (8%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  L L +S +T LP  + KL +L+ L LY ++L  LP +IG + NL  L L+ N 
Sbjct: 182 KLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQ 241

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT LP  +  LQ+L+ L L  N+L  LP  + +L +LK L L +N+IKT+  +I+ L  L
Sbjct: 242 LTILPKEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKL 301

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L + +N++  LP E+G+L+NL +LDL+ N L  LP+EIG+   L  L L  N+L  +P
Sbjct: 302 QSLYLPNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILP 361

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           + +G L NL  L L  NRL     TLSK +                      L ++ ++ 
Sbjct: 362 NEIGQLKNLQTLNLRNNRL----TTLSKEIE--------------------QLQNLKSLD 397

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           L  N+ T +P     Q  ++  ++   NQ+  +P GI  + KNL  +++  N LT+LP +
Sbjct: 398 LRSNQLTIFPK-EIGQLKNLQVLDLGSNQLTTLPEGI-GQLKNLQTLDLDSNQLTTLPQE 455

Query: 399 LGTWVGLTELNLGTNQIS 416
           +G    L EL L  NQ+S
Sbjct: 456 IGQLQNLQELFLNNNQLS 473



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 127/212 (59%), Gaps = 5/212 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L+LS + I  +P  +EKL  L+ LYL  N+L +LP +IG + NL  L L+ N LT
Sbjct: 276 KNLKSLNLSYNQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQNLQSLDLSTNRLT 335

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  + +LQ L+ L L  N+L  LP  + +L +L+ L LR NR+ T+  +I+ L NL  
Sbjct: 336 TLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKS 395

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +R N++   P E+G+LKNL  LDL  N L  LP+ IG    L TLDL  N+L  +P  
Sbjct: 396 LDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 455

Query: 281 LGNLINLTRLRLSYNRLES-----VPETLSKC 307
           +G L NL  L L+ N+L S     + + L KC
Sbjct: 456 IGQLQNLQELFLNNNQLSSQEKKRIRKLLPKC 487



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 147/248 (59%), Gaps = 1/248 (0%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  LDLS + +T LP  + +L  L+ LYL  N+L +LP +IG + NL  L L+ N 
Sbjct: 228 KLQNLHELDLSHNQLTILPKEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQ 287

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           + ++P  +  LQ+L+ L L +N+L  LP  + +L +L+ L L  NR+ T+  +I +L NL
Sbjct: 288 IKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNL 347

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L +  N++  LP E+G+LKNL TL+L +N L  L KEI     L +LDL+ N+L   P
Sbjct: 348 QDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFP 407

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L NL  L L  N+L ++PE + +  +L   +++   L++LP   +  L ++  + 
Sbjct: 408 KEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE-IGQLQNLQELF 466

Query: 339 LSRNKFTA 346
           L+ N+ ++
Sbjct: 467 LNNNQLSS 474


>gi|456875008|gb|EMF90242.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 557

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 164/437 (37%), Positives = 245/437 (56%), Gaps = 12/437 (2%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L  N+L   P +IG + NL  L LA N L +LP  +  LQ+L+ L L  N+L  LP  
Sbjct: 43  LDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLATLPKE 102

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + KL  L+ LYL  N++ T+  +I  L +L  LS+ +N++  LP E+G L++L  L+LA+
Sbjct: 103 IGKLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLAN 162

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L  LPKEIG    L  L++ +N+L+ +P  +G L NL  LRL+YN+L ++PE + +  
Sbjct: 163 NQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTTLPEEIGRLE 222

Query: 309 HLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFE 364
           +L + NV    L +LP   G L +L S+N   L  N+    P   G   +   +Y  N  
Sbjct: 223 NLQDLNVFNNQLVTLPQEIGTLQNLQSLN---LENNRLVTLPKEIGALQKLEWLYLTN-- 277

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN 424
            NQ+  +P  I  + + L  + + +N L SLP ++G    L EL L  N++    ++I  
Sbjct: 278 -NQLATLPQEI-GKLQRLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGT 335

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           L NL+ L L  N    LP  IG L +L  L+LE N+L +LP EIG L+ L+ L L +N+L
Sbjct: 336 LPNLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRL 395

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
            +LP+ IG L  L +L +  N L ++P+EIG L+NL  L L  N  L  +P  +     L
Sbjct: 396 ATLPKEIGTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLEYNQ-LATLPEAIGTLQRL 454

Query: 545 QIMSLDNCPLSQIPSEI 561
           + +SL N  L+ +P EI
Sbjct: 455 EWLSLKNNQLTTLPEEI 471



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 169/463 (36%), Positives = 261/463 (56%), Gaps = 6/463 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L+ + +  LP  +E L  L+ LYL  N+LA+LP +IG +  L  L L  N LT
Sbjct: 61  QNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLATLPKEIGKLQRLERLYLGGNQLT 120

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++P  +  LQ L  L L +N+L  LP  +  L  L+ L L  N+++T+  +I  L +L  
Sbjct: 121 TIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQD 180

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++ +N++  LP E+G L+NL  L LA+N L  LP+EIG    L  L++ +N+LV +P  
Sbjct: 181 LNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTTLPEEIGRLENLQDLNVFNNQLVTLPQE 240

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  NRL ++P+ +     L    +    L++LP   +  L  +  + L+
Sbjct: 241 IGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPQE-IGKLQRLEWLGLT 299

Query: 341 RNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
            N+  + P   G  Q  ++  +  E+N+++  P  I     NL +++++ N  T+LP ++
Sbjct: 300 NNQLKSLPQEIGKLQ--NLKELILENNRLESFPKEI-GTLPNLQRLHLEYNRFTTLPQEI 356

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           GT   L  LNL  NQ++ L ++I  L  LE L L NN L  LP  IG L+KL+ L L  N
Sbjct: 357 GTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANN 416

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L +LP EIG L+ L+ L L+ NQL +LP AIG L  L +LS+  N L ++PEEIGTL+ 
Sbjct: 417 QLATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLPEEIGTLQK 476

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           +  L L +N  L  +P  +    +L+ + L   P +  P EIV
Sbjct: 477 IVKLNLANNQ-LRTLPQGIGQLQSLKDLDLSGNPFTTFPKEIV 518



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 158/422 (37%), Positives = 246/422 (58%), Gaps = 3/422 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L  + +T +P  +  L  LEEL LY N+L +LP +IG + +L  L LA N L +LP  
Sbjct: 112 LYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKE 171

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ L++ +N+L  LP  +  L +LK L L +N++ T+  +I  L NL  L++ +
Sbjct: 172 IGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTTLPEEIGRLENLQDLNVFN 231

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G L+NL +L+L +N L  LPKEIG    L  L L +N+L  +P  +G L 
Sbjct: 232 NQLVTLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPQEIGKLQ 291

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L+ N+L+S+P+ + K  +L E  +E   L S P   + +L ++  + L  N+FT
Sbjct: 292 RLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKE-IGTLPNLQRLHLEYNRFT 350

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P    T    +  +N EHNQ+  +P  I  R + L  +N+ +N L +LP ++GT   L
Sbjct: 351 TLPQEIGT-LHRLPWLNLEHNQLTTLPQEI-GRLERLEWLNLYNNRLATLPKEIGTLQKL 408

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L L  NQ++ L ++I  L NL+ L L  N L  LP +IG L++L+ L L+ N+L +LP
Sbjct: 409 QHLYLANNQLATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLP 468

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            EIG L+++ +L L +NQL +LP+ IG L +L  L +  N   + P+EI  L++L  L L
Sbjct: 469 EEIGTLQKIVKLNLANNQLRTLPQGIGQLQSLKDLDLSGNPFTTFPKEIVGLKHLQILKL 528

Query: 526 ND 527
            +
Sbjct: 529 KN 530



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 160/448 (35%), Positives = 254/448 (56%), Gaps = 4/448 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS++ +  LP  + KL  LE LYL GN+L ++P +IG + +L  L L  N L +LP  
Sbjct: 89  LYLSENQLATLPKEIGKLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQE 148

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L  L+L +N+L  LP  +  L  L+ L +  N++ T+  +I  L NL  L +  
Sbjct: 149 IGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAY 208

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G L+NL  L++ +N L  LP+EIG    L +L+L++N LV +P  +G L 
Sbjct: 209 NQLTTLPEEIGRLENLQDLNVFNNQLVTLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQ 268

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L+ N+L ++P+ + K   L    +    L SLP   +  L ++  + L  N+  
Sbjct: 269 KLEWLYLTNNQLATLPQEIGKLQRLEWLGLTNNQLKSLPQE-IGKLQNLKELILENNRLE 327

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           ++P    T   ++  ++ E+N+   +P  I +  + L  +N++ N LT+LP ++G    L
Sbjct: 328 SFPKEIGT-LPNLQRLHLEYNRFTTLPQEIGTLHR-LPWLNLEHNQLTTLPQEIGRLERL 385

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             LNL  N+++ L ++I  L  L+ L L+NN L  LP  IG L+ LK LDLE N+L +LP
Sbjct: 386 EWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLEYNQLATLP 445

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
             IG L+ L+ L L++NQL +LP  IG L  +  L++  N L+++P+ IG L++L  L L
Sbjct: 446 EAIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRTLPQGIGQLQSLKDLDL 505

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCP 553
           + N      P E+    +LQI+ L N P
Sbjct: 506 SGNP-FTTFPKEIVGLKHLQILKLKNIP 532



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 146/398 (36%), Positives = 226/398 (56%), Gaps = 4/398 (1%)

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           ++L N   +R LDL +N+L   P  +  L +LK L L  N++KT+  +I+ L  L  L +
Sbjct: 32  EALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYL 91

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
            +N++  LP E+G+L+ L  L L  N L  +P+EIG    L  L L +N+L+ +P  +G 
Sbjct: 92  SENQLATLPKEIGKLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQEIGT 151

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L +L  L L+ N+L ++P+ +    HL + NV    L +LP   + +L ++  + L+ N+
Sbjct: 152 LQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQE-IGTLQNLKYLRLAYNQ 210

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
            T  P     +  ++  +N  +NQ+  +P  I    +NL  +N+++N L +LP ++G   
Sbjct: 211 LTTLPE-EIGRLENLQDLNVFNNQLVTLPQEI-GTLQNLQSLNLENNRLVTLPKEIGALQ 268

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            L  L L  NQ++ L ++I  L  LE L L+NN LK LP  IG L+ LK L LE N+LES
Sbjct: 269 KLEWLYLTNNQLATLPQEIGKLQRLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLES 328

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
            P EIG L  LQRL L+ N+  +LP+ IG L  L +L++  N L ++P+EIG LE L  L
Sbjct: 329 FPKEIGTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWL 388

Query: 524 YLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L +N  L  +P E+     LQ + L N  L+ +P EI
Sbjct: 389 NLYNNR-LATLPKEIGTLQKLQHLYLANNQLATLPKEI 425



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/289 (33%), Positives = 154/289 (53%), Gaps = 3/289 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L+L  + +  LP  +  L  LE LYL  N+LA+LP +IG +  L  LGL  N L 
Sbjct: 245 QNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPQEIGKLQRLEWLGLTNNQLK 304

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP  +  LQ L+ L L +N+L   P  +  L +L+ L+L +NR  T+  +I  L  L  
Sbjct: 305 SLPQEIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTLPQEIGTLHRLPW 364

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  N++  LP E+G L+ L  L+L +N L  LPKEIG    L  L L +N+L  +P  
Sbjct: 365 LNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPKE 424

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L YN+L ++PE +     L   +++   L++LP+  + +L  I  + L+
Sbjct: 425 IGQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLPEE-IGTLQKIVKLNLA 483

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
            N+    P  G  Q  S+  ++   N     P  I    K+L  + +K+
Sbjct: 484 NNQLRTLPQ-GIGQLQSLKDLDLSGNPFTTFPKEIVG-LKHLQILKLKN 530



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 86/144 (59%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
            +E ++N +++  L L NN L   P  IG L+ LK L L  N+L++LP EI  L++L+ L
Sbjct: 30  FNEALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWL 89

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L  NQL +LP+ IG L  L  L +G N L +IP+EIG L++L  L L +N  +  +P E
Sbjct: 90  YLSENQLATLPKEIGKLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLI-TLPQE 148

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    +L+ ++L N  L  +P EI
Sbjct: 149 IGTLQDLEELNLANNQLRTLPKEI 172


>gi|418755366|ref|ZP_13311573.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964377|gb|EKO32267.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 513

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 172/435 (39%), Positives = 248/435 (57%), Gaps = 6/435 (1%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           LYL  N+LA+LP++IG +  L  L L+ N LT+LP+ +  LQ L  LDL HN+L   P  
Sbjct: 43  LYLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDLFHNRLTTFPNE 102

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L  LK LYL  N++ T+  +I  L  L  L +++N +  LP E+G L+ L  L L +
Sbjct: 103 IVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLATLPSEIGRLQRLKRLYLYN 162

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           NHL  LPKEIG    L  L L+ N+L  +P  +G L NL  L +S N L ++P  + K  
Sbjct: 163 NHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLR 222

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
            L   N+    L +LP+ +   L ++  + LS N+    P     Q   +  ++ EHNQ+
Sbjct: 223 SLKRLNLSNNLLITLPNEI-GKLQNLEELNLSNNQLITLPQE-IGQLQELEWLHLEHNQL 280

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
             +P  I +  K L  + +K+N L +LP ++G    L  L+L  NQ+  L ++I  L NL
Sbjct: 281 ITLPQEIGTLQK-LEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNL 339

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
             L +SNN L  LP+ IG L  LK L+LE N+L +LP EIG L+ L  L L +NQL +LP
Sbjct: 340 PSLDVSNNHLVTLPNEIGKLLSLKRLNLENNQLTTLPKEIGKLQNLPNLNLSNNQLATLP 399

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN-DNTCLNNIPFELALCSNLQIM 547
             IG L NL YL++  N L+++P EIG LENL   YLN +N  L  +P E+    NL+++
Sbjct: 400 NEIGQLENLQYLNLENNQLKTLPNEIGQLENLQ--YLNLENNQLKTLPNEIGRLQNLKVL 457

Query: 548 SLDNCPLSQIPSEIV 562
           +L    L  +P EIV
Sbjct: 458 NLGGNQLVTLPQEIV 472



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 164/422 (38%), Positives = 255/422 (60%), Gaps = 3/422 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS + +T LP  + +L +LEEL L+ N+L + P++I  +  L  L LA+N L +LP  
Sbjct: 66  LNLSNNRLTTLPNEIGRLQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKE 125

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L+ L L++N L  LP  + +L  LK LYL  N + T+  +I  L NL  L + D
Sbjct: 126 IGTLQKLQHLYLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLED 185

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L+NL  LD+++NHL  LP EIG    L  L+L +N L+ +P+ +G L 
Sbjct: 186 NQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQ 245

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L LS N+L ++P+ + +   L   ++E   L +LP   + +L  +  + L  N   
Sbjct: 246 NLEELNLSNNQLITLPQEIGQLQELEWLHLEHNQLITLPQE-IGTLQKLEYLYLKNNHLE 304

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P+    +  S+  ++ EHNQ+  +P  I +  +NL  +++ +N L +LP ++G  + L
Sbjct: 305 TLPN-EIGKLRSLKRLHLEHNQLITLPQEIGT-LQNLPSLDVSNNHLVTLPNEIGKLLSL 362

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             LNL  NQ++ L ++I  L NL  L LSNN L  LP+ IG L  L+ L+LE N+L++LP
Sbjct: 363 KRLNLENNQLTTLPKEIGKLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLP 422

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
           NEIG L+ LQ L L++NQL +LP  IG L NL  L++G N L ++P+EI  L++L  L L
Sbjct: 423 NEIGQLENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQEIVGLKHLQILKL 482

Query: 526 ND 527
            +
Sbjct: 483 KN 484



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 148/420 (35%), Positives = 219/420 (52%), Gaps = 48/420 (11%)

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           ++L N   +R+L L  N+L  LP  + KL  L+ L L  NR+ T+  +I  L NL  L +
Sbjct: 32  EALKNPMDVRILYLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDL 91

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
             N++   P E+  L+ L  L LA N L  LPKEIG    L  L L++N L  +P  +G 
Sbjct: 92  FHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLATLPSEIGR 151

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L  L RL L  N L ++P+ + K  +L +  +E   L++LP   +  L ++ ++ +S N 
Sbjct: 152 LQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQE-IGQLENLQDLDVSNNH 210

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
            T  P                 N+I K+        ++L ++N+ +NLL +LP ++G   
Sbjct: 211 LTTLP-----------------NEIGKL--------RSLKRLNLSNNLLITLPNEIGKLQ 245

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            L ELNL  NQ+  L ++I  L  LE L L +N L  LP  IG L+KL+ L L+ N LE+
Sbjct: 246 NLEELNLSNNQLITLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLET 305

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           LPNEIG L+ L+RL L+ NQL++LP+ IG L NL  L V  N+L ++P EIG L +L  L
Sbjct: 306 LPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPSLDVSNNHLVTLPNEIGKLLSLKRL 365

Query: 524 YLNDNTCLN----------------------NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L +N                           +P E+    NLQ ++L+N  L  +P+EI
Sbjct: 366 NLENNQLTTLPKEIGKLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNEI 425



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 207/377 (54%), Gaps = 26/377 (6%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +L L  + +  LP  + +L  L+ LYLY N L +LP +IG + NL  L L +N LT+LP 
Sbjct: 134 HLYLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQ 193

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            +  L+ L+ LD+ +N L  LP  + KL SLK L L  N + T+  +I  L NL  L++ 
Sbjct: 194 EIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQNLEELNLS 253

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           +N++  LP E+G+L+ L  L L HN L  LP+EIG    L  L L++N L  +P+ +G L
Sbjct: 254 NNQLITLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKL 313

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
            +L RL L +N+L ++P+ +    +L   +V    L +LP+ +                 
Sbjct: 314 RSLKRLHLEHNQLITLPQEIGTLQNLPSLDVSNNHLVTLPNEI----------------- 356

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
                    +  S+  +N E+NQ+  +P  I  + +NL  +N+ +N L +LP ++G    
Sbjct: 357 --------GKLLSLKRLNLENNQLTTLPKEI-GKLQNLPNLNLSNNQLATLPNEIGQLEN 407

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L  LNL  NQ+  L  +I  L NL+ L L NN LK LP+ IG L+ LK L+L  N+L +L
Sbjct: 408 LQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGGNQLVTL 467

Query: 465 PNEIGFLKELQRLILQS 481
           P EI  LK LQ L L++
Sbjct: 468 PQEIVGLKHLQILKLKN 484



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 89/144 (61%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
            +E ++N +++ +L LS+N L  LP+ IG LRKL+ L+L  N+L +LPNEIG L+ L+ L
Sbjct: 30  FNEALKNPMDVRILYLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEEL 89

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L  N+L + P  I  L  L +L + +N L ++P+EIGTL+ L  LYL +N  L  +P E
Sbjct: 90  DLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNN-HLATLPSE 148

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +     L+ + L N  L  +P EI
Sbjct: 149 IGRLQRLKRLYLYNNHLMTLPKEI 172



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 73/128 (57%), Gaps = 1/128 (0%)

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
            N + +    ++ N   ++ L L +N+L +LPNEIG L++L+ L L +N+L +LP  IG 
Sbjct: 23  KNKVYRDFNEALKNPMDVRILYLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGR 82

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L NL  L +  N L + P EI  L+ L  LYL DN  +  +P E+     LQ + L N  
Sbjct: 83  LQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLV-TLPKEIGTLQKLQHLYLKNNH 141

Query: 554 LSQIPSEI 561
           L+ +PSEI
Sbjct: 142 LATLPSEI 149


>gi|440789613|gb|ELR10919.1| SAM domain (Sterile alpha motif) domain containing protein
           [Acanthamoeba castellanii str. Neff]
          Length = 979

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 156/460 (33%), Positives = 252/460 (54%), Gaps = 30/460 (6%)

Query: 107 DLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSL 166
           DL +  +T +P +V ++ +L  L LY NK+ SLP  +G +T L  LGL ENSL +LP+ L
Sbjct: 522 DLRRKELTAVPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKLKALGLNENSLRTLPNEL 581

Query: 167 ANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDN 226
             L  L +LDLR+NKL ELP  +  L  L  L+LR+NR++ +  +I  L +L MLS+R+N
Sbjct: 582 GQLTSLTMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQLPEEIGCLVSLEMLSVRNN 641

Query: 227 KIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           ++ +LP +L    NL  LD++ NHL +  + +     L  LDL+ N+L  +PD  G L +
Sbjct: 642 QLHKLPRKLSMATNLKILDISTNHLTKF-RSVEKLCQLKDLDLKQNKLTTLPDGWGALTD 700

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSL-PDGLLSSLTSINNITLSRNKFT 345
           L RL +S N+LE  P T+++   L   ++E   L+ L P+  + ++TS+ ++ L RNK  
Sbjct: 701 LMRLDVSQNKLEEFPVTITELPRLETLDLEANQLTVLAPE--IGNMTSLRSLYLGRNKLI 758

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           A P+                        G+ +    L ++++K N L ++P +L   V L
Sbjct: 759 ALPA----------------------ELGMLT---GLRELHLKGNRLKAIPPELSALVNL 793

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L+L TN+     +       L  L +S+N +K+L + IG L  LK L+L+EN+L+ LP
Sbjct: 794 KHLDLSTNEFQTFPDARCFPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLP 853

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            EI  L  L  L +  N+L++LP  IG ++ +  L +  N +  +P+ IG L  L    +
Sbjct: 854 GEISLLTGLTELRVGYNELLTLPHEIGDISLIKQLHLEHNKMVELPKSIGNLSALELFVV 913

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGG 565
            DN  LN++P E+   ++L  + +D  P   +P+ +   G
Sbjct: 914 TDN-LLNDLPNEMVNMTSLSELKVDGNPFDNLPAAVRGAG 952



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 139/250 (55%), Gaps = 3/250 (1%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           +++ LD+S++ +   P ++ +L  LE L L  N+L  L  +IG +T+L  L L  N L +
Sbjct: 700 DLMRLDVSQNKLEEFPVTITELPRLETLDLEANQLTVLAPEIGNMTSLRSLYLGRNKLIA 759

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ-YLSNLSM 220
           LP  L  L  LR L L+ N+L  +P  +  L +LK L L  N  +T  PD + +   L+ 
Sbjct: 760 LPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKHLDLSTNEFQTF-PDARCFPPALNS 818

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L+M DN+++ L  ++G L  L  L+L  N L+ LP EI   T L  L + +NEL+ +P  
Sbjct: 819 LNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLPGEISLLTGLTELRVGYNELLTLPHE 878

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G++  + +L L +N++  +P+++     L  F V    L+ LP+ ++ ++TS++ + + 
Sbjct: 879 IGDISLIKQLHLEHNKMVELPKSIGNLSALELFVVTDNLLNDLPNEMV-NMTSLSELKVD 937

Query: 341 RNKFTAYPSG 350
            N F   P+ 
Sbjct: 938 GNPFDNLPAA 947



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 74/136 (54%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE 156
           RC    + +L++S + +  L   +  LT L++L L  N+L  LP +I  +T LT L +  
Sbjct: 810 RCFPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLPGEISLLTGLTELRVGY 869

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N L +LP  + ++  ++ L L HNK+ ELP  +  L++L++  +  N +  +  ++  ++
Sbjct: 870 NELLTLPHEIGDISLIKQLHLEHNKMVELPKSIGNLSALELFVVTDNLLNDLPNEMVNMT 929

Query: 217 NLSMLSMRDNKIRELP 232
           +LS L +  N    LP
Sbjct: 930 SLSELKVDGNPFDNLP 945



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 1/119 (0%)

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
           S  G+   L+  DL   +L ++P+ +  +K L  L L  N++ SLP  +G LT L  L +
Sbjct: 510 SGSGSAGGLQSYDLRRKELTAVPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKLKALGL 569

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            EN+L+++P E+G L +L  L L  N  L  +P  +    +L  + L    L Q+P EI
Sbjct: 570 NENSLRTLPNELGQLTSLTMLDLRYNK-LTELPATIKHLVHLNKLFLRYNRLEQLPEEI 627


>gi|421130081|ref|ZP_15590279.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410358680|gb|EKP05831.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 515

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 166/433 (38%), Positives = 242/433 (55%), Gaps = 4/433 (0%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L  N+  +LP +IG + NL  L L +N LT LP  +  L+ LR L+L  N+   LP  
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKE 110

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           V KL +LK LYL  NR+ T+  +I  L NL +L +  N+ + +P E+G+LKNL TL L +
Sbjct: 111 VEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLYLGN 170

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L  LP EIG    L  L L  N L  +P  +G L NL +L L  N+   +P+ + K  
Sbjct: 171 NQLTALPNEIGQIQNLQFLYLGSNRLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLE 230

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L E  +    L++LP+  +  L ++  + L+ N+F    S    Q  ++ ++N  +NQ+
Sbjct: 231 NLKELYLGSNRLTTLPNE-IGQLKNLRVLELTHNQFKTI-SKEIGQLKNLQTLNLGYNQL 288

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
             +P  I  + +NL  + + +N LT+LP ++G    L  L LG NQ++ L  +I  L  L
Sbjct: 289 TALPNEI-GQLQNLQSLYLGNNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQKL 347

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L LS N L  LP+ IG L+ L+ L L  N+L  LPNEIG LK LQ L L+SN+L +L 
Sbjct: 348 QELYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLS 407

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMS 548
           + I  L NL  L +  N L + P+EI  L+NL  L L  N  L  +P E+    NLQ+  
Sbjct: 408 KDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQ-LTTLPKEIGQLKNLQVFE 466

Query: 549 LDNCPLSQIPSEI 561
           L+N  L+ +P EI
Sbjct: 467 LNNNQLTTLPKEI 479



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 159/428 (37%), Positives = 234/428 (54%), Gaps = 26/428 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  +  T LP  VEKL +L+ELYL  N+L +LP++IG + NL  L L  N   
Sbjct: 92  KNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFK 151

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++P  +  L+ L+ L L +N+L  LP  + ++ +L+ LYL  NR+  +  +I  L NL  
Sbjct: 152 TIPKEIGQLKNLQTLYLGNNQLTALPNEIGQIQNLQFLYLGSNRLTILPKEIGQLKNLRK 211

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++ DN+   LP E+ +L+NL  L L  N L  LP EIG    L  L+L HN+   I   
Sbjct: 212 LNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTISKE 271

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L YN+L ++P  + +  +L    +    L++LP+  +  L ++ ++ L 
Sbjct: 272 IGQLKNLQTLNLGYNQLTALPNEIGQLQNLQSLYLGNNQLTALPNE-IGQLQNLQSLYLG 330

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ TA P+              E  Q+ K           L ++ +  N LT+LP ++G
Sbjct: 331 NNQLTALPN--------------EIGQLQK-----------LQELYLSTNRLTTLPNEIG 365

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L EL LG+NQ++ L  +I  L NL+ L L +N L  L   I  L+ LK LDL  N+
Sbjct: 366 QLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQ 425

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L + P EI  LK LQ L L SNQL +LP+ IG L NL    +  N L ++P+EIG L+NL
Sbjct: 426 LTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNL 485

Query: 521 HTLYLNDN 528
             LYL DN
Sbjct: 486 QELYLIDN 493



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 137/386 (35%), Positives = 211/386 (54%), Gaps = 26/386 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L+ +    +P  + +L +L+ LYL  N+L +LP++IG + NL  L L  N LT
Sbjct: 138 KNLRVLELTHNQFKTIPKEIGQLKNLQTLYLGNNQLTALPNEIGQIQNLQFLYLGSNRLT 197

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  L+ LR L+L  N+   LP  V KL +LK LYL  NR+ T+  +I  L NL +
Sbjct: 198 ILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRV 257

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+ + +  E+G+LKNL TL+L +N L  LP EIG    L +L L +N+L  +P+ 
Sbjct: 258 LELTHNQFKTISKEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQSLYLGNNQLTALPNE 317

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L ++P  + +   L E  +    L++LP+  +  L ++  + L 
Sbjct: 318 IGQLQNLQSLYLGNNQLTALPNEIGQLQKLQELYLSTNRLTTLPNE-IGQLQNLQELYLG 376

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                 N+I ++        KNL  + ++ N LT+L  D+ 
Sbjct: 377 SNQLTILP-----------------NEIGQL--------KNLQTLYLRSNRLTTLSKDIE 411

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  NQ++   ++I+ L NL+VL L +N L  LP  IG L+ L+  +L  N+
Sbjct: 412 QLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQ 471

Query: 461 LESLPNEIGFLKELQRLILQSNQLVS 486
           L +LP EIG L+ LQ L L  NQL S
Sbjct: 472 LTTLPKEIGQLQNLQELYLIDNQLSS 497



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/368 (35%), Positives = 198/368 (53%), Gaps = 27/368 (7%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
            +++L L  NR KT+  +I  L NL  L++  N++  LP E+G+LKNL  L+L  N    
Sbjct: 47  DVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTI 106

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LPKE+     L  L L  N L  +P+ +G L NL  L L++N+ +++P+ + +  +L   
Sbjct: 107 LPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTL 166

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
            +    L++LP+  +  + ++  + L  N+ T  P                         
Sbjct: 167 YLGNNQLTALPNE-IGQIQNLQFLYLGSNRLTILPKE----------------------- 202

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
               + KNL K+N+ DN  T LP ++     L EL LG+N+++ L  +I  L NL VL L
Sbjct: 203 --IGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLEL 260

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           ++N  K +   IG L+ L+ L+L  N+L +LPNEIG L+ LQ L L +NQL +LP  IG 
Sbjct: 261 THNQFKTISKEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIGQ 320

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L NL  L +G N L ++P EIG L+ L  LYL+ N  L  +P E+    NLQ + L +  
Sbjct: 321 LQNLQSLYLGNNQLTALPNEIGQLQKLQELYLSTNR-LTTLPNEIGQLQNLQELYLGSNQ 379

Query: 554 LSQIPSEI 561
           L+ +P+EI
Sbjct: 380 LTILPNEI 387



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 91/152 (59%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + +T LP  + +L +L+ELYL  N+L  LP++IG + NL  L L  N LT+L   
Sbjct: 350 LYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKD 409

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ LDL +N+L   P  + +L +L++L L  N++ T+  +I  L NL +  + +
Sbjct: 410 IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNN 469

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           N++  LP E+G+L+NL  L L  N L    KE
Sbjct: 470 NQLTTLPKEIGQLQNLQELYLIDNQLSSEEKE 501



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 70/123 (56%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  +I N   ++ L+L  N+ ++LP EIG LK LQ L L  NQL  LP+ IG L NL 
Sbjct: 36  RDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 95

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L++ +N    +P+E+  LENL  LYL  N  L  +P E+    NL+++ L +     IP
Sbjct: 96  KLNLYDNQFTILPKEVEKLENLKELYLGSNR-LTTLPNEIGQLKNLRVLELTHNQFKTIP 154

Query: 559 SEI 561
            EI
Sbjct: 155 KEI 157


>gi|255088489|ref|XP_002506167.1| predicted protein [Micromonas sp. RCC299]
 gi|226521438|gb|ACO67425.1| predicted protein [Micromonas sp. RCC299]
          Length = 394

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 153/395 (38%), Positives = 234/395 (59%), Gaps = 3/395 (0%)

Query: 120 VEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRH 179
           V +L  L  + L  N+L SLP++IG +T+L  LGL  N LTS+P  +  L  L  L L  
Sbjct: 3   VGRLGALRTMNLGVNQLTSLPAEIGQLTSLRELGLEGNELTSVPAEIGQLTALVELKLED 62

Query: 180 NKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELK 239
           N L ELP  + +L SL  L L  N + ++  +I  L++L + ++  N++ ELP E+G+LK
Sbjct: 63  NMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLASLVVSNLNYNQLTELPAEIGQLK 122

Query: 240 NLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLES 299
           +L  L+L++NHL  LP EIG  T LV L L+ NEL ++P  +G L +L  L+L  N L  
Sbjct: 123 SLRELNLSNNHLTILPAEIGQLTSLVELKLEGNELTSVPAEIGQLASLVELKLEDNMLTE 182

Query: 300 VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVY 359
           +P  + +   L E  +EG  L+S+P   +  LTS+    L+ N+ T  P+    Q  S+ 
Sbjct: 183 LPAEIGQLKSLVELKLEGNELTSMPAE-IGQLTSLVVSNLNYNQLTELPA-EIGQLKSLR 240

Query: 360 SINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS 419
            +N  +NQ+  +P  I  + K+L ++ ++DN+LT LP ++G    L ELNL  N+++ + 
Sbjct: 241 ELNLSNNQLTSLPAEI-GQLKSLVELKLEDNMLTELPAEIGQLKSLVELNLYNNRLTSVP 299

Query: 420 EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLIL 479
            +I  L +L  L L +N+L +LP+ IG L+ L+ L L  N+L S+P EIG L  L  L L
Sbjct: 300 AEIGQLTSLVELKLEDNMLTELPAEIGQLKSLRELKLWNNRLTSVPAEIGQLTSLTELDL 359

Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           + N+L S+P  IG LT+L+ L + +N L S+P EI
Sbjct: 360 RCNELTSVPAEIGQLTSLTELVLHKNQLTSLPAEI 394



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 139/386 (36%), Positives = 205/386 (53%), Gaps = 26/386 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L  + +T +P  + +LT L EL L  N L  LP++IG + +L  L L  N LTS+P  
Sbjct: 35  LGLEGNELTSVPAEIGQLTALVELKLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAE 94

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L V +L +N+L ELP  + +L SL+ L L  N +  +  +I  L++L  L +  
Sbjct: 95  IGQLASLVVSNLNYNQLTELPAEIGQLKSLRELNLSNNHLTILPAEIGQLTSLVELKLEG 154

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  +P E+G+L +LV L L  N L ELP EIG    LV L L+ NEL ++P  +G L 
Sbjct: 155 NELTSVPAEIGQLASLVELKLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLT 214

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L    L+YN+L  +P  + +   L E N                        LS N+ T
Sbjct: 215 SLVVSNLNYNQLTELPAEIGQLKSLRELN------------------------LSNNQLT 250

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P+    Q  S+  +  E N + ++P  I  + K+L ++N+ +N LTS+P ++G    L
Sbjct: 251 SLPA-EIGQLKSLVELKLEDNMLTELPAEI-GQLKSLVELNLYNNRLTSVPAEIGQLTSL 308

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            EL L  N +++L  +I  L +L  L L NN L  +P+ IG L  L  LDL  N+L S+P
Sbjct: 309 VELKLEDNMLTELPAEIGQLKSLRELKLWNNRLTSVPAEIGQLTSLTELDLRCNELTSVP 368

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAI 491
            EIG L  L  L+L  NQL SLP  I
Sbjct: 369 AEIGQLTSLTELVLHKNQLTSLPAEI 394



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 141/396 (35%), Positives = 212/396 (53%), Gaps = 27/396 (6%)

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  LR ++L  N+L  LP  + +LTSL+ L L  N + +V  +I  L+ L  L + D
Sbjct: 3   VGRLGALRTMNLGVNQLTSLPAEIGQLTSLRELGLEGNELTSVPAEIGQLTALVELKLED 62

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N + ELP E+G+LK+LV L L  N L  +P EIG    LV  +L +N+L  +P  +G L 
Sbjct: 63  NMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLASLVVSNLNYNQLTELPAEIGQLK 122

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L  L LS N L  +P  + +   L E  +EG  L+S+P  +                  
Sbjct: 123 SLRELNLSNNHLTILPAEIGQLTSLVELKLEGNELTSVPAEI------------------ 164

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                   Q  S+  +  E N + ++P  I  + K+L ++ ++ N LTS+P ++G    L
Sbjct: 165 -------GQLASLVELKLEDNMLTELPAEI-GQLKSLVELKLEGNELTSMPAEIGQLTSL 216

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
              NL  NQ+++L  +I  L +L  L LSNN L  LP+ IG L+ L  L LE+N L  LP
Sbjct: 217 VVSNLNYNQLTELPAEIGQLKSLRELNLSNNQLTSLPAEIGQLKSLVELKLEDNMLTELP 276

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            EIG LK L  L L +N+L S+P  IG LT+L  L + +N L  +P EIG L++L  L L
Sbjct: 277 AEIGQLKSLVELNLYNNRLTSVPAEIGQLTSLVELKLEDNMLTELPAEIGQLKSLRELKL 336

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            +N  L ++P E+   ++L  + L    L+ +P+EI
Sbjct: 337 WNNR-LTSVPAEIGQLTSLTELDLRCNELTSVPAEI 371



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/345 (37%), Positives = 195/345 (56%), Gaps = 7/345 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ L L  + +T LP  + +L  L EL L GN+L S+P++IG + +L    L  N LT L
Sbjct: 55  LVELKLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLASLVVSNLNYNQLTEL 114

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P  +  L+ LR L+L +N L  LP  + +LTSL  L L  N + +V  +I  L++L  L 
Sbjct: 115 PAEIGQLKSLRELNLSNNHLTILPAEIGQLTSLVELKLEGNELTSVPAEIGQLASLVELK 174

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           + DN + ELP E+G+LK+LV L L  N L  +P EIG  T LV  +L +N+L  +P  +G
Sbjct: 175 LEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLTSLVVSNLNYNQLTELPAEIG 234

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLS 340
            L +L  L LS N+L S+P  + +   L E  +E   L+ LP   G L SL  +N   L 
Sbjct: 235 QLKSLRELNLSNNQLTSLPAEIGQLKSLVELKLEDNMLTELPAEIGQLKSLVELN---LY 291

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T+ P+    Q TS+  +  E N + ++P  I  + K+L ++ + +N LTS+P ++G
Sbjct: 292 NNRLTSVPA-EIGQLTSLVELKLEDNMLTELPAEI-GQLKSLRELKLWNNRLTSVPAEIG 349

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
               LTEL+L  N+++ +  +I  L +L  LVL  N L  LP+ I
Sbjct: 350 QLTSLTELDLRCNELTSVPAEIGQLTSLTELVLHKNQLTSLPAEI 394



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 120/330 (36%), Positives = 182/330 (55%), Gaps = 8/330 (2%)

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+G L  L T++L  N L  LP EIG  T L  L L+ NEL ++P  +G L  L  L+L 
Sbjct: 2   EVGRLGALRTMNLGVNQLTSLPAEIGQLTSLRELGLEGNELTSVPAEIGQLTALVELKLE 61

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTAYPSGG 351
            N L  +P  + +   L E  +EG  L+S+P   G L+SL   N   L+ N+ T  P+  
Sbjct: 62  DNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLASLVVSN---LNYNQLTELPAE- 117

Query: 352 PTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLG 411
             Q  S+  +N  +N +  +P  I  +  +L ++ ++ N LTS+P ++G    L EL L 
Sbjct: 118 IGQLKSLRELNLSNNHLTILPAEI-GQLTSLVELKLEGNELTSVPAEIGQLASLVELKLE 176

Query: 412 TNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
            N +++L  +I  L +L  L L  N L  +P+ IG L  L   +L  N+L  LP EIG L
Sbjct: 177 DNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLTSLVVSNLNYNQLTELPAEIGQL 236

Query: 472 KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
           K L+ L L +NQL SLP  IG L +L  L + +N L  +P EIG L++L  L L +N  L
Sbjct: 237 KSLRELNLSNNQLTSLPAEIGQLKSLVELKLEDNMLTELPAEIGQLKSLVELNLYNNR-L 295

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            ++P E+   ++L  + L++  L+++P+EI
Sbjct: 296 TSVPAEIGQLTSLVELKLEDNMLTELPAEI 325


>gi|255078866|ref|XP_002503013.1| predicted protein [Micromonas sp. RCC299]
 gi|226518279|gb|ACO64271.1| predicted protein [Micromonas sp. RCC299]
          Length = 423

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 162/429 (37%), Positives = 234/429 (54%), Gaps = 27/429 (6%)

Query: 133 GNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKL 192
           GN+L SLP++IG +T+LT L L  N LTS+P  +  L  L+ L L +N+L  LP  + +L
Sbjct: 2   GNQLTSLPAEIGQLTSLTKLNLGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQL 61

Query: 193 TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLE 252
           TSL+ LYL  N++     +I  L+ L+ L +  N++  +P E+G L +L  L L  N L 
Sbjct: 62  TSLRELYLCNNKLTIAPAEIGQLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQLT 121

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
            +P EI   T L  L L  N+L ++P  +G L +LT LRL  NRL S+P  + +   L  
Sbjct: 122 GVPAEIVQLTTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTSLEA 181

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
             + G  L+S+P   +  LTS+  + L  N+ T+ P+    Q TS+ ++    NQ     
Sbjct: 182 LYLHGNQLTSVPAE-IGQLTSLEKLELYDNQLTSVPA-EIGQLTSLKALWLFGNQ----- 234

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
                              LTSLP ++G    LT L L  N+++ L  +I  L +LE L 
Sbjct: 235 -------------------LTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTSLEALW 275

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L +N L  +P+ IG L  LK L L  N+L S+P EIG L  L  L L +N+L SLP  IG
Sbjct: 276 LHDNQLTSVPAEIGQLTSLKELWLHGNRLTSVPAEIGQLTSLGALSLYNNRLTSLPEEIG 335

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            LT+L  L +G N L S+PEEIG L +L  LYL  N  L +IP E+A  ++L ++ L   
Sbjct: 336 QLTSLDRLYLGRNQLMSVPEEIGQLSSLLWLYLGSNQ-LTSIPAEIAQLTSLSVLDLSGN 394

Query: 553 PLSQIPSEI 561
            L+ +P+ I
Sbjct: 395 QLTSVPAAI 403



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 150/409 (36%), Positives = 217/409 (53%), Gaps = 26/409 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+L ++ +T +P  + +LT L+EL LY N+L SLP++IG +T+L  L L  N LT  P  
Sbjct: 21  LNLGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQLTSLRELYLCNNKLTIAPAE 80

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L  L L  N+L  +P  +  LTSL+ LYL  N++  V  +I  L+ L  L +  
Sbjct: 81  IGQLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQLTGVPAEIVQLTTLEALWLHG 140

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L +L  L L +N L  LP EIG  T L  L L  N+L ++P  +G L 
Sbjct: 141 NQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTSLEALYLHGNQLTSVPAEIGQLT 200

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L +L L  N+L SVP  + +   L    + G  L+SLP   +  LTS+  + L  N+ T
Sbjct: 201 SLEKLELYDNQLTSVPAEIGQLTSLKALWLFGNQLTSLPAE-IGQLTSLTGLRLYNNRLT 259

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P+                 +I ++         +L  + + DN LTS+P ++G    L
Sbjct: 260 SLPA-----------------EIGQL--------TSLEALWLHDNQLTSVPAEIGQLTSL 294

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            EL L  N+++ +  +I  L +L  L L NN L  LP  IG L  L  L L  N+L S+P
Sbjct: 295 KELWLHGNRLTSVPAEIGQLTSLGALSLYNNRLTSLPEEIGQLTSLDRLYLGRNQLMSVP 354

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            EIG L  L  L L SNQL S+P  I  LT+LS L +  N L S+P  I
Sbjct: 355 EEIGQLSSLLWLYLGSNQLTSIPAEIAQLTSLSVLDLSGNQLTSVPAAI 403



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 154/423 (36%), Positives = 224/423 (52%), Gaps = 27/423 (6%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           +T LP  + +LT L +L L  N L S+P++I  +T L  L L  N LTSLP  +  L  L
Sbjct: 5   LTSLPAEIGQLTSLTKLNLGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQLTSL 64

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
           R L L +NKL   P  + +LT+L  L L  N++ +V  +I  L++L  L + DN++  +P
Sbjct: 65  RELYLCNNKLTIAPAEIGQLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQLTGVP 124

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            E+ +L  L  L L  N L  LP EIG  T L  L L +N L ++P  +G L +L  L L
Sbjct: 125 AEIVQLTTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTSLEALYL 184

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
             N+L SVP  + +                        LTS+  + L  N+ T+ P+   
Sbjct: 185 HGNQLTSVPAEIGQ------------------------LTSLEKLELYDNQLTSVPA-EI 219

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
            Q TS+ ++    NQ+  +P  I  +  +L+ + + +N LTSLP ++G    L  L L  
Sbjct: 220 GQLTSLKALWLFGNQLTSLPAEI-GQLTSLTGLRLYNNRLTSLPAEIGQLTSLEALWLHD 278

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           NQ++ +  +I  L +L+ L L  N L  +P+ IG L  L  L L  N+L SLP EIG L 
Sbjct: 279 NQLTSVPAEIGQLTSLKELWLHGNRLTSVPAEIGQLTSLGALSLYNNRLTSLPEEIGQLT 338

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            L RL L  NQL+S+P  IG L++L +L +G N L SIP EI  L +L  L L+ N  L 
Sbjct: 339 SLDRLYLGRNQLMSVPEEIGQLSSLLWLYLGSNQLTSIPAEIAQLTSLSVLDLSGNQ-LT 397

Query: 533 NIP 535
           ++P
Sbjct: 398 SVP 400



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/348 (34%), Positives = 195/348 (56%), Gaps = 3/348 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L  + +T  P  + +LT L EL L+GN+L S+P++IG +T+L  L L +N LT +P  
Sbjct: 67  LYLCNNKLTIAPAEIGQLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQLTGVPAE 126

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L  L L  N+L  LP  + +LTSL  L L  NR+ ++  +I  L++L  L +  
Sbjct: 127 IVQLTTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTSLEALYLHG 186

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  +P E+G+L +L  L+L  N L  +P EIG  T L  L L  N+L ++P  +G L 
Sbjct: 187 NQLTSVPAEIGQLTSLEKLELYDNQLTSVPAEIGQLTSLKALWLFGNQLTSLPAEIGQLT 246

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +LT LRL  NRL S+P  + +   L    +    L+S+P  +   LTS+  + L  N+ T
Sbjct: 247 SLTGLRLYNNRLTSLPAEIGQLTSLEALWLHDNQLTSVPAEI-GQLTSLKELWLHGNRLT 305

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P+    Q TS+ +++  +N++  +P  I  +  +L ++ +  N L S+P ++G    L
Sbjct: 306 SVPAE-IGQLTSLGALSLYNNRLTSLPEEI-GQLTSLDRLYLGRNQLMSVPEEIGQLSSL 363

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
             L LG+NQ++ +  +I  L +L VL LS N L  +P++I  LR   C
Sbjct: 364 LWLYLGSNQLTSIPAEIAQLTSLSVLDLSGNQLTSVPAAIRELRAAGC 411



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/128 (42%), Positives = 73/128 (57%), Gaps = 1/128 (0%)

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
            N L  LP+ IG L  L  L+L  N L S+P EI  L  LQ L L +NQL SLP  IG L
Sbjct: 2   GNQLTSLPAEIGQLTSLTKLNLGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQL 61

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
           T+L  L +  N L   P EIG L  L  L L+ N  L ++P E+ L ++L+ + L +  L
Sbjct: 62  TSLRELYLCNNKLTIAPAEIGQLTALTELLLHGNQ-LTSVPAEIGLLTSLRELYLHDNQL 120

Query: 555 SQIPSEIV 562
           + +P+EIV
Sbjct: 121 TGVPAEIV 128


>gi|220907470|ref|YP_002482781.1| hypothetical protein Cyan7425_2057 [Cyanothece sp. PCC 7425]
 gi|219864081|gb|ACL44420.1| leucine-rich repeat protein [Cyanothece sp. PCC 7425]
          Length = 482

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 162/472 (34%), Positives = 259/472 (54%), Gaps = 4/472 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L +S + +T LP S+  L +L+EL L  N+L  LP  IG +  L  L LA N L  LP +
Sbjct: 14  LGVSHNQLTQLPESICLLINLQELSLENNQLTELPEAIGSLIQLQELNLASNLLIKLPKT 73

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +++L QL+ L+LR N+L ++P  +  LT L+ L+L  N++  +   I  L+ L  L +  
Sbjct: 74  ISSLTQLKELNLRENQLADVPDEIGFLTQLQELWLSSNQLTHLPEMIGSLTQLQELFLYS 133

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++ +LP  L  L  L  L L  NHL  LP+ IG+ T+L  LDL+ N+L ++P+ +G+LI
Sbjct: 134 NQLTDLPESLANLTRLNWLSLETNHLTVLPETIGSLTLLNELDLKENQLTSLPESVGSLI 193

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L +L L+ N+L  +PE++     LNE  +    L+SLP   +  L  +  + +  N+ +
Sbjct: 194 RLKKLDLADNQLTHLPESIGSLSRLNELCLCNNQLNSLPKS-IGHLKQLKELCVCNNQLS 252

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P G       +  I+   NQ+  +P  I S  + L  +++  N L  LP  +G+   L
Sbjct: 253 NLP-GSIGSLRRLRKIDLSDNQLTYLPESIGSLTQ-LYWLDLSGNQLKHLPESIGSLTQL 310

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L+L  NQ+++L   I +L +LE L LS+N L ++P SI +L +L+ L+L  N+L  LP
Sbjct: 311 LGLSLSNNQLTELPTAICSLTDLESLRLSDNQLTEIPESISDLTELEWLNLSRNQLTELP 370

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
             IG L EL+   L  NQL  LP +IG L  L ++ + +N L  +PE   +L  L  LYL
Sbjct: 371 AAIGLLTELETFYLSENQLTELPESIGALIQLDWIFLDDNQLIKLPESFSSLIQLRRLYL 430

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQG 577
            +N  L  +P  +     L+ + L+  PL+   + +   G S ++ YL+ +G
Sbjct: 431 ENNQ-LTELPVAIGSLVQLEEIKLNGNPLNSDLATVYAQGTSAVLAYLRAKG 481



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 141/400 (35%), Positives = 206/400 (51%), Gaps = 30/400 (7%)

Query: 87  ADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYV 146
           AD+  E  FL   +E    L LS + +THLP  +  LT L+EL+LY N+L  LP  +  +
Sbjct: 91  ADVPDEIGFLTQLQE----LWLSSNQLTHLPEMIGSLTQLQELFLYSNQLTDLPESLANL 146

Query: 147 TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK 206
           T L  L L  N LT LP+++ +L  L  LDL+ N+L  LP  V  L  LK L L  N++ 
Sbjct: 147 TRLNWLSLETNHLTVLPETIGSLTLLNELDLKENQLTSLPESVGSLIRLKKLDLADNQLT 206

Query: 207 TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
            +   I  LS L+ L + +N++  LP  +G LK L  L + +N L  LP  IG+   L  
Sbjct: 207 HLPESIGSLSRLNELCLCNNQLNSLPKSIGHLKQLKELCVCNNQLSNLPGSIGSLRRLRK 266

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           +DL  N+L  +P+ +G+L  L  L LS N+L+ +PE+                       
Sbjct: 267 IDLSDNQLTYLPESIGSLTQLYWLDLSGNQLKHLPES----------------------- 303

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
            + SLT +  ++LS N+ T  P+      T + S+    NQ+ +IP  I S    L  +N
Sbjct: 304 -IGSLTQLLGLSLSNNQLTELPT-AICSLTDLESLRLSDNQLTEIPESI-SDLTELEWLN 360

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           +  N LT LP  +G    L    L  NQ+++L E I  L+ L+ + L +N L KLP S  
Sbjct: 361 LSRNQLTELPAAIGLLTELETFYLSENQLTELPESIGALIQLDWIFLDDNQLIKLPESFS 420

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
           +L +L+ L LE N+L  LP  IG L +L+ + L  N L S
Sbjct: 421 SLIQLRRLYLENNQLTELPVAIGSLVQLEEIKLNGNPLNS 460


>gi|418693084|ref|ZP_13254147.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400356742|gb|EJP12900.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 738

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 163/453 (35%), Positives = 260/453 (57%), Gaps = 18/453 (3%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS  + T LP  +EKL +L++LYL+ N+LA+ P+ I  +  L  L L+EN L  
Sbjct: 49  NVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNQLATFPAVIVELQKLESLDLSENRLVM 108

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP+ +  LQ L+ L L  NKL   P  + +L +L+ L L+ N++ T+  +I  L NL  L
Sbjct: 109 LPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLEKL 168

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++R N++  LP E+G+L+NL TL+L  N L  LP EIG    L TL L  N+L   P  +
Sbjct: 169 NLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEI 228

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L L+ N+L+++P+ + +   L + N++G  +++LP G               
Sbjct: 229 GQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKG--------------- 273

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P+    Q  ++  ++  +N++  +P  I  + +NL  +++  N LT+LP ++  
Sbjct: 274 NQLTTLPA-EIGQLKNLQILSLSYNRLATLPREI-GQLQNLKSLDLGGNQLTTLPREINK 331

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L EL L  N+++ + ++I  L NL +L L NN +  LP  I   + L+ L+L  N+L
Sbjct: 332 LKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRL 391

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            +LP EIG LK L+ L L++N++  LP  IG L NL   ++  N L SIP+EIG L+NL 
Sbjct: 392 VTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLR 451

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
            LYL +N  L  +P ++    +L++++L   PL
Sbjct: 452 MLYL-ENNQLKTLPRQMEKLQDLEVLNLLINPL 483



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 171/539 (31%), Positives = 270/539 (50%), Gaps = 86/539 (15%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS++ +  LP  + +L +L+EL LY NKL + P +IG + NL  L L +N L +LP  
Sbjct: 99  LDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVE 158

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L  L+LR N+L  LP  + +L +L+ L L+ N++ T+  +I  L NL  L + +
Sbjct: 159 IGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSE 218

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL---------QHNELVN 276
           N++   P E+G+L+NL  LDL  N L+ LPKEIG    L  L+L         + N+L  
Sbjct: 219 NQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTT 278

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L NL  L LSYNRL ++P  + +  +L   ++ G  L++LP  + + L ++  
Sbjct: 279 LPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREI-NKLKNLKE 337

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L+ NK T  P     +  ++  +  ++N+I  +P  I  ++KNL ++N++ N L +LP
Sbjct: 338 LYLNGNKLTIVPKE-IWELENLTILRLKNNRISTLPKEI-EKSKNLQELNLRGNRLVTLP 395

Query: 397 LDLGTW-------------------VGLTE----LNLGTNQISKLSEDIQNLVNLEVLVL 433
            ++G                     +G  E     NL  N+++ + ++I NL NL +L L
Sbjct: 396 GEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYL 455

Query: 434 SNNLLKKLPSSIGNLRKLKCLDL--------EENKLESL--------------------- 464
            NN LK LP  +  L+ L+ L+L        E  K+++L                     
Sbjct: 456 ENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQALLPNCNIDLRDVEEGETYRNLN 515

Query: 465 ----------------------PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
                                 P EI  LK L+ L L    LV+LP+ I  L +L  LS+
Sbjct: 516 LALEQPLKILSLSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSL 575

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           G N L+S+P+EIG L NL +L +  N     +P E+A   NL+ + L+       P EI
Sbjct: 576 GLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI 634



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 160/489 (32%), Positives = 247/489 (50%), Gaps = 64/489 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYL---------YGNKLASLPSQIGYVTNLTC 151
           EN+  LDL+ + +  LP  + +L  LE+L L          GN+L +LP++IG + NL  
Sbjct: 232 ENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQI 291

Query: 152 LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD 211
           L L+ N L +LP  +  LQ L+ LDL  N+L  LP  + KL +LK LYL  N++  V  +
Sbjct: 292 LSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKE 351

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTM-------- 263
           I  L NL++L +++N+I  LP E+ + KNL  L+L  N L  LP EIG   +        
Sbjct: 352 IWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLEN 411

Query: 264 ---------------LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
                          L   +L  N+L +IP  +GNL NL  L L  N+L+++P  + K  
Sbjct: 412 NRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQ 471

Query: 309 HLNEFNV----------------------------EGCALSSLPDGLLSSLTSINNITLS 340
            L   N+                            EG    +L   L   L  I +++L 
Sbjct: 472 DLEVLNLLINPLLSKERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPL-KILSLSLE 530

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
             +F+ +P     +  ++ S++     +  +P  I  R K+L ++++  N L SLP ++G
Sbjct: 531 YQQFSLFPKE-ILRLKNLRSLSLYDTSLVALPKEIV-RLKHLERLSLGLNQLKSLPKEIG 588

Query: 401 TWVGLTELNLGTN-QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
               L  L++G N +   L ++I  L NL  L+L+ N  K  P  I  L+KL  L++  N
Sbjct: 589 LLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTN 648

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L++LP +IG LK LQ L L  N+L +LP  IG L NL+ L +  N ++++PEEI  L+N
Sbjct: 649 QLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQN 708

Query: 520 LHTLYLNDN 528
           L  L L +N
Sbjct: 709 LRKLTLYEN 717



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 109/318 (34%), Positives = 168/318 (52%), Gaps = 13/318 (4%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  LDL       +P  +  L NL +L L  N+L + P  + +   L  
Sbjct: 39  DLTKALQNPLNVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNQLATFPAVIVELQKLES 98

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            ++    L  LP+  +  L ++  + L +NK   +P     Q  ++ ++N + NQ+  +P
Sbjct: 99  LDLSENRLVMLPNE-IGRLQNLQELGLYKNKLITFPK-EIGQLQNLQTLNLQDNQLATLP 156

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  R +NL K+N++ N LT LP ++G    L  LNL  NQ++ L  +I  L NL+ L 
Sbjct: 157 VEI-GRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLG 215

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA-- 490
           LS N L   P  IG L  L+ LDL  N+L++LP EIG L++L++L L  NQ+ +LP+   
Sbjct: 216 LSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQ 275

Query: 491 -------IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
                  IG L NL  LS+  N L ++P EIG L+NL +L L  N  L  +P E+    N
Sbjct: 276 LTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQ-LTTLPREINKLKN 334

Query: 544 LQIMSLDNCPLSQIPSEI 561
           L+ + L+   L+ +P EI
Sbjct: 335 LKELYLNGNKLTIVPKEI 352



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 181/380 (47%), Gaps = 34/380 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIG---------------- 144
           EN+  L L  + I+ LP  +EK  +L+EL L GN+L +LP +IG                
Sbjct: 356 ENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIK 415

Query: 145 -------YVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
                   + NL    L+ N L S+P  + NLQ LR+L L +N+L  LP  + KL  L++
Sbjct: 416 ILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 475

Query: 198 LYLRFN-RIKTVHPDIQYLSNLSMLSMRD----NKIRELPPELGELKNLVTLDLAHNHLE 252
           L L  N  +      IQ L     + +RD       R L   L +   +++L L +    
Sbjct: 476 LNLLINPLLSKERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFS 535

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
             PKEI     L +L L    LV +P  +  L +L RL L  N+L+S+P+ +    +L  
Sbjct: 536 LFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRS 595

Query: 313 FNVEG-CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
            ++        LP   ++ L ++ ++ L++N+F  +P     +   +  +N   NQ+D +
Sbjct: 596 LDIGANNEFEVLPKE-IARLQNLRSLLLNQNRFKIFPK-EIWELKKLVILNVNTNQLDAL 653

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  R K L  +++  N LT+LP ++G    LTEL L  N+I  L E+I  L NL  L
Sbjct: 654 PEKI-GRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKL 712

Query: 432 VLSNNLLKKLPSSIGNLRKL 451
            L  N +   P  +  +RKL
Sbjct: 713 TLYENPIP--PQELDKIRKL 730


>gi|421127514|ref|ZP_15587738.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410435604|gb|EKP84736.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 470

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 157/423 (37%), Positives = 236/423 (55%), Gaps = 26/423 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + +L +L+ LYL+ N+L  LP +I  + NL  L L  N LT+LP+ 
Sbjct: 52  LDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE 111

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VLDL  N+L  LP  + +L +L++LYLR NR+ T+  +I+ L NL +L +  
Sbjct: 112 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGS 171

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+ +LKNL  L L  N L  LP EI     L  LDL  N+L  +P  +  L 
Sbjct: 172 NQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLK 231

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  NRL ++ + + +  +L   ++    L++LP+  +  L ++ ++ LS N+F 
Sbjct: 232 NLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSENQFA 290

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P                             + +NL  + + +N +T LP ++     L
Sbjct: 291 TFPKE-------------------------IGQLQNLKVLFLNNNQITILPNEIAKLKKL 325

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L L  NQ+  L ++I+ L NL+ L LS N L  LP  +G L  L+ LDL  N+L++LP
Sbjct: 326 QYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLP 385

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            EI  LK LQ L L +NQL +LP+ IG L NL +LS+  N L ++P EI  L+NL TLYL
Sbjct: 386 KEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQTLYL 445

Query: 526 NDN 528
           N+N
Sbjct: 446 NNN 448



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/400 (35%), Positives = 209/400 (52%), Gaps = 27/400 (6%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N  ++RVLDL   +L  LP+ + +L +L+ LYL +N++  +  +I+ L NL +L
Sbjct: 39  LTKALQNPLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 98

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +R N++  LP E+ +LKNL  LDL  N L  LP+EI     L  L L+ N L  +P+ +
Sbjct: 99  YLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEI 158

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L L  N+L  +P+ + +  +L    +    L++LP+ +   L ++  + L  
Sbjct: 159 EQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEI-EQLKNLQVLDLGS 217

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P                             + KNL  + +  N LT+L  D+  
Sbjct: 218 NQLTVLPQE-------------------------IEQLKNLQLLYLHSNRLTTLSKDIEQ 252

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L+L  NQ++ L  +I+ L NL+ L LS N     P  IG L+ LK L L  N++
Sbjct: 253 LQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQI 312

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
             LPNEI  LK+LQ L L  NQL++LP+ I  L NL  L +  N L  +P+E+G LENL 
Sbjct: 313 TILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQ 372

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           TL L +N  L  +P E+    NLQ + L N  L+ +P EI
Sbjct: 373 TLDLRNNQ-LKTLPKEIEQLKNLQTLFLSNNQLTTLPQEI 411



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 135/381 (35%), Positives = 203/381 (53%), Gaps = 26/381 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L  + +T LP  +E+L +L+ L L  N+L  LP +I  + NL  L L  N LT+LP+ 
Sbjct: 98  LYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE 157

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VLDL  N+L  LP  + +L +L++LYLR NR+ T+  +I+ L NL +L +  
Sbjct: 158 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGS 217

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+ +LKNL  L L  N L  L K+I     L +LDL +N+L  +P+ +  L 
Sbjct: 218 NQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 277

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L LS N+  + P+ + +  +L    +    ++ LP+  ++ L  +  + LS N+  
Sbjct: 278 NLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNE-IAKLKKLQYLYLSDNQLI 336

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                             + KNL  +++  N LT LP ++G    L
Sbjct: 337 TLPKE-------------------------IEQLKNLKSLDLSYNQLTILPKEVGQLENL 371

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L+L  NQ+  L ++I+ L NL+ L LSNN L  LP  IG L+ L  L L  N+L +LP
Sbjct: 372 QTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLP 431

Query: 466 NEIGFLKELQRLILQSNQLVS 486
           NEI  LK LQ L L +NQ  S
Sbjct: 432 NEIEQLKNLQTLYLNNNQFSS 452



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 148/246 (60%), Gaps = 1/246 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  +E+L +L+ LYL+ N+L +L   I  + NL  L L+ N LT
Sbjct: 208 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 267

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  L+ L+ L L  N+    P  + +L +LK+L+L  N+I  +  +I  L  L  
Sbjct: 268 TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQY 327

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN++  LP E+ +LKNL +LDL++N L  LPKE+G    L TLDL++N+L  +P  
Sbjct: 328 LYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 387

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L LS N+L ++P+ + +  +L   ++    L++LP+  +  L ++  + L+
Sbjct: 388 IEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNE-IEQLKNLQTLYLN 446

Query: 341 RNKFTA 346
            N+F++
Sbjct: 447 NNQFSS 452



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 8/137 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + +  LP  +E+L +L+ L L  N+L  LP ++G + NL  L L  N L +LP  
Sbjct: 328 LYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 387

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L +N+L  LP  + +L +L  L L +N++ T+  +I+ L NL  L + +
Sbjct: 388 IEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 447

Query: 226 N--------KIRELPPE 234
           N        +IR+L P+
Sbjct: 448 NQFSSQEKKRIRKLLPK 464


>gi|418755315|ref|ZP_13311522.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964326|gb|EKO32216.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 511

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 160/427 (37%), Positives = 240/427 (56%), Gaps = 3/427 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++ +L L++  +  L   V  L +L EL L  N+LA+LP++IG + NL  L L  N L +
Sbjct: 39  DVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQLENLQVLSLYNNRLRT 98

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  LQ LR L+L +N+L  LP  + +L +L+ L L  NR+K++  +I  L  L  L
Sbjct: 99  LPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQALNLHNNRLKSLPKEIGKLQKLERL 158

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++R LP E+G L++L  L L+ + L+  P+EIG    L  L L  N+LV +   +
Sbjct: 159 YLGGNQLRTLPQEIGTLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEI 218

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L +L RL L  N+L ++P  + K  +L E N+    L +LP   + +L ++ N+ L  
Sbjct: 219 GKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQE-IGALENLQNLHLYS 277

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F   P     Q  ++  ++  HNQ+  +P  I  + +NL  + +  N L SLP ++G 
Sbjct: 278 NQFRTLPK-QIWQLQNLQDLHLAHNQLTVLPQEI-GQLENLQSLILARNQLKSLPKEIGK 335

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L L  NQ++ L ++I  L  LE L L +N L  LP  I  L KLK LDL  N+L
Sbjct: 336 LQKLKWLILANNQLTVLPQEIGQLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQL 395

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
             LP EIG L++L+ L L +NQL  LP+ IG L  L YL +  N L ++P+EIG LE L 
Sbjct: 396 RLLPEEIGKLQKLEYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIGKLEKLE 455

Query: 522 TLYLNDN 528
            L L+ N
Sbjct: 456 DLDLSGN 462



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 143/424 (33%), Positives = 226/424 (53%), Gaps = 27/424 (6%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L  +L N   ++ L L  ++L  L   V  L +L+ L L  N++ T+  +I  L NL +
Sbjct: 29  DLDAALKNPMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQLENLQV 88

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+ +N++R LP E+G L+NL  L+L +N L  LP  IG    L  L+L +N L ++P  
Sbjct: 89  LSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQALNLHNNRLKSLPKE 148

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L  L RL L  N+L ++P+ +     L E ++    L + P+  +  L S+  + L 
Sbjct: 149 IGKLQKLERLYLGGNQLRTLPQEIGTLQDLEELHLSRDQLKTFPEE-IGKLRSLKRLILD 207

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+     S    +  S+  +  E+NQ+  +P  I  + +NL ++N+ +N L +LP ++G
Sbjct: 208 SNQLVVL-SQEIGKLRSLERLILENNQLATLPNEI-GKLQNLEELNLSNNQLVTLPQEIG 265

Query: 401 T---------------------W--VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
                                 W    L +L+L  NQ++ L ++I  L NL+ L+L+ N 
Sbjct: 266 ALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGQLENLQSLILARNQ 325

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           LK LP  IG L+KLK L L  N+L  LP EIG L++L+ L L+ NQL +LP+ I  L  L
Sbjct: 326 LKSLPKEIGKLQKLKWLILANNQLTVLPQEIGQLEKLEDLYLEDNQLTTLPKEIWKLEKL 385

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
            YL +  N L+ +PEEIG L+ L  L L++N  L  +P ++     L+ + L N  L+ +
Sbjct: 386 KYLDLANNQLRLLPEEIGKLQKLEYLDLSNNQ-LRLLPQKIGKLEKLKYLDLSNNQLATL 444

Query: 558 PSEI 561
           P EI
Sbjct: 445 PKEI 448



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 190/340 (55%), Gaps = 9/340 (2%)

Query: 225 DNKI-RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
           DNK+ R+L   L    ++ +L L  + L  L +E+G    L  L+L++N+L  +P+ +G 
Sbjct: 23  DNKVYRDLDAALKNPMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQ 82

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L NL  L L  NRL ++P+ +    +L E N+E   L++LP+G +  L ++  + L  N+
Sbjct: 83  LENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNG-IGQLENLQALNLHNNR 141

Query: 344 FTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
             + P   G   +   +Y      NQ+  +P  I +  ++L ++++  + L + P ++G 
Sbjct: 142 LKSLPKEIGKLQKLERLY---LGGNQLRTLPQEIGT-LQDLEELHLSRDQLKTFPEEIGK 197

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L L +NQ+  LS++I  L +LE L+L NN L  LP+ IG L+ L+ L+L  N+L
Sbjct: 198 LRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQL 257

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            +LP EIG L+ LQ L L SNQ  +LP+ I  L NL  L +  N L  +P+EIG LENL 
Sbjct: 258 VTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGQLENLQ 317

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +L L  N  L ++P E+     L+ + L N  L+ +P EI
Sbjct: 318 SLILARNQ-LKSLPKEIGKLQKLKWLILANNQLTVLPQEI 356



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 185/391 (47%), Gaps = 72/391 (18%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN+  L+L  + +  LP  + KL  LE LYL GN+L +LP +IG + +L  L L+ + L 
Sbjct: 130 ENLQALNLHNNRLKSLPKEIGKLQKLERLYLGGNQLRTLPQEIGTLQDLEELHLSRDQLK 189

Query: 161 SLPDSLANLQQLR--VLD---------------------LRHNKLNELPMVVYKLTSLKI 197
           + P+ +  L+ L+  +LD                     L +N+L  LP  + KL +L+ 
Sbjct: 190 TFPEEIGKLRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQNLEE 249

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L L  N++ T+  +I  L NL  L +  N+ R LP ++ +L+NL  L LAHN L  LP+E
Sbjct: 250 LNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQE 309

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           IG    L +L L  N+L ++P  +G L  L  L L+ N+L  +P+ + +   L +  +E 
Sbjct: 310 IGQLENLQSLILARNQLKSLPKEIGKLQKLKWLILANNQLTVLPQEIGQLEKLEDLYLED 369

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             L++LP                                       E  +++K+ Y    
Sbjct: 370 NQLTTLPK--------------------------------------EIWKLEKLKY---- 387

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
                  +++ +N L  LP ++G    L  L+L  NQ+  L + I  L  L+ L LSNN 
Sbjct: 388 -------LDLANNQLRLLPEEIGKLQKLEYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQ 440

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           L  LP  IG L KL+ LDL  N   + P EI
Sbjct: 441 LATLPKEIGKLEKLEDLDLSGNPFTTFPKEI 471



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 127/226 (56%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L+LS + +  LP  +  L +L+ L+LY N+  +LP QI  + NL  L LA N 
Sbjct: 243 KLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQ 302

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT LP  +  L+ L+ L L  N+L  LP  + KL  LK L L  N++  +  +I  L  L
Sbjct: 303 LTVLPQEIGQLENLQSLILARNQLKSLPKEIGKLQKLKWLILANNQLTVLPQEIGQLEKL 362

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L + DN++  LP E+ +L+ L  LDLA+N L  LP+EIG    L  LDL +N+L  +P
Sbjct: 363 EDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLLPEEIGKLQKLEYLDLSNNQLRLLP 422

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
             +G L  L  L LS N+L ++P+ + K   L + ++ G   ++ P
Sbjct: 423 QKIGKLEKLKYLDLSNNQLATLPKEIGKLEKLEDLDLSGNPFTTFP 468



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 120/204 (58%), Gaps = 1/204 (0%)

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
            Y  + E N++ +          ++  +++  + L +L  ++GT   L ELNL  NQ++ 
Sbjct: 16  FYKCDAEDNKVYRDLDAALKNPMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLAT 75

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L  +I  L NL+VL L NN L+ LP  +G L+ L+ L+LE N+L +LPN IG L+ LQ L
Sbjct: 76  LPNEIGQLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQAL 135

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L +N+L SLP+ IG L  L  L +G N L+++P+EIGTL++L  L+L+ +  L   P E
Sbjct: 136 NLHNNRLKSLPKEIGKLQKLERLYLGGNQLRTLPQEIGTLQDLEELHLSRDQ-LKTFPEE 194

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    +L+ + LD+  L  +  EI
Sbjct: 195 IGKLRSLKRLILDSNQLVVLSQEI 218



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            K E +  LDL+ + +  LP  + KL  LE L L  N+L  LP +IG +  L  L L+ N
Sbjct: 380 WKLEKLKYLDLANNQLRLLPEEIGKLQKLEYLDLSNNQLRLLPQKIGKLEKLKYLDLSNN 439

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELP 186
            L +LP  +  L++L  LDL  N     P
Sbjct: 440 QLATLPKEIGKLEKLEDLDLSGNPFTTFP 468



 Score = 42.7 bits (99), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 35/62 (56%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS + +  LP  + KL  L+ L L  N+LA+LP +IG +  L  L L+ N  T+ P  
Sbjct: 411 LDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIGKLEKLEDLDLSGNPFTTFPKE 470

Query: 166 LA 167
           + 
Sbjct: 471 IV 472


>gi|256078767|ref|XP_002575666.1| shoc2 [Schistosoma mansoni]
 gi|353232025|emb|CCD79380.1| putative shoc2 [Schistosoma mansoni]
          Length = 396

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/382 (37%), Positives = 224/382 (58%), Gaps = 3/382 (0%)

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE-LPPELGELKNLVTLDLAHNHLEE 253
           +K LYL +N++  +   I  L  L  L ++ N+++  +P  +G L  L TLDL+ N L +
Sbjct: 1   MKQLYLTYNKLTDISA-IGNLRFLQTLVVKSNQLQGPIPDCIGNLTQLKTLDLSKNRLTK 59

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           + + IGNC +L    + +N++  +P  +G L  LT L + YN L  +P T+  C  L E 
Sbjct: 60  ITENIGNCKLLSRFLVDYNQIDELPKSIGQLSELTVLGIKYNCLSELPVTICNCEKLTEL 119

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           N+EG  ++ LP+ LL  L    ++ LS N F ++P G  TQ+ +V     ++N+++    
Sbjct: 120 NIEGNHITQLPENLLCHLKDSLSVVLSHNDFNSFPIGDKTQYKNVKHFRLDYNRLELFEA 179

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPL-DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
              S    L+ +N+ +N + +L    + T   L EL+L  NQI +L + I  LV+LEVL 
Sbjct: 180 VQLSENTQLTTLNLCNNNIITLDFTGIETLKHLVELDLSYNQIGQLPDSIGELVSLEVLD 239

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L++N L+ LP+ IG L +L  L+LE N++ S+P  IG L +LQ L L  N+L  LP  IG
Sbjct: 240 LTSNRLEGLPNRIGELVRLVQLELESNQITSIPLNIGQLCQLQTLNLDVNKLSRLPSTIG 299

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
           +L NL  L V EN LQ +P EIG LENL  LYL++N  L+ +P EL + S+L+ + +D C
Sbjct: 300 NLNNLKKLRVKENLLQRLPPEIGKLENLTHLYLSNNKPLDLLPIELGMLSSLRFLGIDGC 359

Query: 553 PLSQIPSEIVVGGPSLIIRYLK 574
            L Q+P +I   G + +I+YL+
Sbjct: 360 SLRQMPVDITKNGSASVIKYLR 381



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 205/420 (48%), Gaps = 52/420 (12%)

Query: 119 SVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
           ++  L  L+ L +  N+L   +P  IG +T L  L L++N LT + +++ N + L    +
Sbjct: 16  AIGNLRFLQTLVVKSNQLQGPIPDCIGNLTQLKTLDLSKNRLTKITENIGNCKLLSRFLV 75

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE-LG 236
            +N+++ELP  + +L+ L +L +++N +  +   I     L+ L++  N I +LP   L 
Sbjct: 76  DYNQIDELPKSIGQLSELTVLGIKYNCLSELPVTICNCEKLTELNIEGNHITQLPENLLC 135

Query: 237 ELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNR 296
            LK+ +++ L+HN     P  IG+ T       Q+              N+   RL YNR
Sbjct: 136 HLKDSLSVVLSHNDFNSFP--IGDKT-------QYK-------------NVKHFRLDYNR 173

Query: 297 LESVPET-LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
           LE      LS+   L   N+    + +L    + +L  +  + LS N+    P     + 
Sbjct: 174 LELFEAVQLSENTQLTTLNLCNNNIITLDFTGIETLKHLVELDLSYNQIGQLPD-SIGEL 232

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
            S+  ++   N+++ +P  I    + L ++ ++ N +TS+PL++G    L  LNL  N++
Sbjct: 233 VSLEVLDLTSNRLEGLPNRIGELVR-LVQLELESNQITSIPLNIGQLCQLQTLNLDVNKL 291

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           S+L                       PS+IGNL  LK L ++EN L+ LP EIG L+ L 
Sbjct: 292 SRL-----------------------PSTIGNLNNLKKLRVKENLLQRLPPEIGKLENLT 328

Query: 476 RLILQSNQ-LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL-YLNDNTCLNN 533
            L L +N+ L  LP  +G L++L +L +   +L+ +P +I    +   + YL D  C++N
Sbjct: 329 HLYLSNNKPLDLLPIELGMLSSLRFLGIDGCSLRQMPVDITKNGSASVIKYLRDLLCIHN 388



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 174/365 (47%), Gaps = 44/365 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLSK+ +T +  ++     L    +  N++  LP  IG ++ LT LG+  N L+ LP +
Sbjct: 50  LDLSKNRLTKITENIGNCKLLSRFLVDYNQIDELPKSIGQLSELTVLGIKYNCLSELPVT 109

Query: 166 LANLQQLRVLDLRHNKLNELP--MVVYKLTSLKIL--YLRFNRIKTVHPDIQYLSNLSML 221
           + N ++L  L++  N + +LP  ++ +   SL ++  +  FN    +    QY  N+   
Sbjct: 110 ICNCEKLTELNIEGNHITQLPENLLCHLKDSLSVVLSHNDFNSFP-IGDKTQY-KNVKHF 167

Query: 222 SMRDNKIRELPP-ELGELKNLVTLDLAHNHLEELP-KEIGNCTMLVTLDLQHNELVNIPD 279
            +  N++      +L E   L TL+L +N++  L    I     LV LDL +N++  +PD
Sbjct: 168 RLDYNRLELFEAVQLSENTQLTTLNLCNNNIITLDFTGIETLKHLVELDLSYNQIGQLPD 227

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +G L++L  L L+ NRLE +P  + + V L +  +E   ++S+P  +            
Sbjct: 228 SIGELVSLEVLDLTSNRLEGLPNRIGELVRLVQLELESNQITSIPLNI------------ 275

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
                         Q   + ++N + N++ ++P  I     NL K+ +K+NLL  LP ++
Sbjct: 276 -------------GQLCQLQTLNLDVNKLSRLPSTI-GNLNNLKKLRVKENLLQRLPPEI 321

Query: 400 GTWVGLTELNLGTNQ-ISKLSEDIQNLVNLEVLVLSNNLLKKLP---------SSIGNLR 449
           G    LT L L  N+ +  L  ++  L +L  L +    L+++P         S I  LR
Sbjct: 322 GKLENLTHLYLSNNKPLDLLPIELGMLSSLRFLGIDGCSLRQMPVDITKNGSASVIKYLR 381

Query: 450 KLKCL 454
            L C+
Sbjct: 382 DLLCI 386



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 95/159 (59%), Gaps = 1/159 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           ++++ LDLS + I  LP S+ +L  LE L L  N+L  LP++IG +  L  L L  N +T
Sbjct: 210 KHLVELDLSYNQIGQLPDSIGELVSLEVLDLTSNRLEGLPNRIGELVRLVQLELESNQIT 269

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           S+P ++  L QL+ L+L  NKL+ LP  +  L +LK L ++ N ++ + P+I  L NL+ 
Sbjct: 270 SIPLNIGQLCQLQTLNLDVNKLSRLPSTIGNLNNLKKLRVKENLLQRLPPEIGKLENLTH 329

Query: 221 LSMRDNK-IRELPPELGELKNLVTLDLAHNHLEELPKEI 258
           L + +NK +  LP ELG L +L  L +    L ++P +I
Sbjct: 330 LYLSNNKPLDLLPIELGMLSSLRFLGIDGCSLRQMPVDI 368



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 103/197 (52%), Gaps = 10/197 (5%)

Query: 83  EPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQ 142
           E +Q   N +   L     NI+ LD +          +E L HL EL L  N++  LP  
Sbjct: 178 EAVQLSENTQLTTLNLCNNNIITLDFT---------GIETLKHLVELDLSYNQIGQLPDS 228

Query: 143 IGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           IG + +L  L L  N L  LP+ +  L +L  L+L  N++  +P+ + +L  L+ L L  
Sbjct: 229 IGELVSLEVLDLTSNRLEGLPNRIGELVRLVQLELESNQITSIPLNIGQLCQLQTLNLDV 288

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH-LEELPKEIGNC 261
           N++  +   I  L+NL  L +++N ++ LPPE+G+L+NL  L L++N  L+ LP E+G  
Sbjct: 289 NKLSRLPSTIGNLNNLKKLRVKENLLQRLPPEIGKLENLTHLYLSNNKPLDLLPIELGML 348

Query: 262 TMLVTLDLQHNELVNIP 278
           + L  L +    L  +P
Sbjct: 349 SSLRFLGIDGCSLRQMP 365



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 122/257 (47%), Gaps = 32/257 (12%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEE---LYLYGNKLASLP-------------- 140
           C  E +  L++  + IT LP ++  L HL++   + L  N   S P              
Sbjct: 111 CNCEKLTELNIEGNHITQLPENL--LCHLKDSLSVVLSHNDFNSFPIGDKTQYKNVKHFR 168

Query: 141 -----------SQIGYVTNLTCLGLAENSLTSLP-DSLANLQQLRVLDLRHNKLNELPMV 188
                       Q+   T LT L L  N++ +L    +  L+ L  LDL +N++ +LP  
Sbjct: 169 LDYNRLELFEAVQLSENTQLTTLNLCNNNIITLDFTGIETLKHLVELDLSYNQIGQLPDS 228

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L SL++L L  NR++ +   I  L  L  L +  N+I  +P  +G+L  L TL+L  
Sbjct: 229 IGELVSLEVLDLTSNRLEGLPNRIGELVRLVQLELESNQITSIPLNIGQLCQLQTLNLDV 288

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNR-LESVPETLSKC 307
           N L  LP  IGN   L  L ++ N L  +P  +G L NLT L LS N+ L+ +P  L   
Sbjct: 289 NKLSRLPSTIGNLNNLKKLRVKENLLQRLPPEIGKLENLTHLYLSNNKPLDLLPIELGML 348

Query: 308 VHLNEFNVEGCALSSLP 324
             L    ++GC+L  +P
Sbjct: 349 SSLRFLGIDGCSLRQMP 365


>gi|421117845|ref|ZP_15578200.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010627|gb|EKO68763.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 636

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 164/482 (34%), Positives = 252/482 (52%), Gaps = 27/482 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS++ +  LP  + +L +L++L LY NKL + P +IG + NL  LGL +N LT+ P  
Sbjct: 117 LDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKE 176

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ L L  NKL   P  + +L +L+ L+L  NR+  +  +I  L NL  L +++
Sbjct: 177 IGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQN 236

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+   LP E+G+L+NL TL+L  N L  LP EIG    L  L L++N L  +P  +G L 
Sbjct: 237 NQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQ 296

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSI----NNITL 339
           NL  L    NRL ++P+ + +  +L   N+    L+ LP   G L +L  +    N ++L
Sbjct: 297 NLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSL 356

Query: 340 SRNKFTA--YPSG------------------GPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
              K     +P                       +   V+ +  ++    ++   +  + 
Sbjct: 357 KERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKF 416

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           +NL ++ + D   ++LP ++     L  L LG N + K+  +I  L NLE L L  N L+
Sbjct: 417 RNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELE 476

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
           +LP  IG LR L+ L L +N L+  P EI  LK+LQ+L L  NQ  + P+ IG L NL  
Sbjct: 477 RLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQT 536

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPS 559
           L++  N L ++P EI  L+NL  L LNDN     +P E+     LQ + L N  L+ +P+
Sbjct: 537 LNLQRNQLTNLPAEIEQLKNLQELDLNDNQ-FTVLPKEIGKLKKLQTLDLRNNQLTTLPT 595

Query: 560 EI 561
           EI
Sbjct: 596 EI 597



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 154/442 (34%), Positives = 239/442 (54%), Gaps = 33/442 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L L K+ +T  P  + +L +L++L+L  N+L +LP +IG + NL  L L  N  T
Sbjct: 181 QNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFT 240

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L+L+ N+L  LP+ + +L +L+ LYLR NR+  +  +I  L NL M
Sbjct: 241 ILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQM 300

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN---- 276
           L   +N++  LP E+G+LKNL TL+L +N L  LPKEIG    L  L+L  N L      
Sbjct: 301 LCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERK 360

Query: 277 -----IPDMLGNL-----------INLTR--------LRLSYNRLESV-PETLSKCVHLN 311
                 PD   +L           +NL +        LRL Y     + P+ + K  +L 
Sbjct: 361 RIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLR 420

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
           E  +  C  S+LP  + S L ++  + L  N     PS    Q  ++ ++N E N+++++
Sbjct: 421 ELYLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKKIPSE-IGQLRNLEALNLEANELERL 478

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + +NL ++++  N L   P ++     L +L+L  NQ +   ++I  L NL+ L
Sbjct: 479 PKEI-GQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTL 537

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  LP+ I  L+ L+ LDL +N+   LP EIG LK+LQ L L++NQL +LP  I
Sbjct: 538 NLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 597

Query: 492 GHLTNLSYLSVGENNLQSIPEE 513
           G L NL +L + +NN  S  E+
Sbjct: 598 GQLQNLQWLYL-QNNQFSFEEQ 618



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 165/531 (31%), Positives = 248/531 (46%), Gaps = 79/531 (14%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  + +L +L+EL L  N L +LP +IG + NL  L L +N L + P  
Sbjct: 48  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 107

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L  LDL  N+L  LP  + +L +L+ L L  N++ T   +I  L NL  L +  
Sbjct: 108 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYK 167

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+   P E+G L+NL  L L  N L   PKEIG    L  L L  N L  +P  +G L 
Sbjct: 168 NKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLK 227

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+   +P+ + +  +L   N++   L++LP   +  L ++  + L  N+ T
Sbjct: 228 NLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVE-IGQLQNLQELYLRNNRLT 286

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++  +    N++  +P  +  + KNL  +N+ +N LT LP ++G    L
Sbjct: 287 VLPK-EIGQLQNLQMLCSPENRLTALPKEM-GQLKNLQTLNLVNNRLTVLPKEIGQLQNL 344

Query: 406 TELNLGTNQIS-------------------KLSED------------------------- 421
            +L L  N +S                   +++ED                         
Sbjct: 345 QDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKN 404

Query: 422 --------IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
                   I    NL  L L +     LP  I  L+ LK L L  N L+ +P+EIG L+ 
Sbjct: 405 FSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRN 464

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ-----------------------SI 510
           L+ L L++N+L  LP+ IG L NL  LS+ +N L+                       + 
Sbjct: 465 LEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 524

Query: 511 PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           P+EIG LENL TL L  N  L N+P E+    NLQ + L++   + +P EI
Sbjct: 525 PKEIGKLENLQTLNLQRNQ-LTNLPAEIEQLKNLQELDLNDNQFTVLPKEI 574



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 143/450 (31%), Positives = 225/450 (50%), Gaps = 37/450 (8%)

Query: 145 YVTNLTCLGLAE----NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           ++  L+C   AE     +   L  +L N   +RVL+L   KL  LP  + +L +L+ L L
Sbjct: 14  FLITLSCEIQAEEVEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNL 73

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
           ++N + T+  +I  L NL  L +RDN++   P  + EL+ L +LDL+ N L  LP EIG 
Sbjct: 74  KWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGR 133

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  L L  N+L   P  +G L NL  L L  N+L + P+ + +  +L +  +    L
Sbjct: 134 LQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKL 193

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
           ++ P   +  L ++  + LS N+ TA P     Q  ++ +++ ++NQ   +P  I  + +
Sbjct: 194 TTFPKE-IGQLQNLQKLWLSENRLTALPK-EIGQLKNLQTLDLQNNQFTILPKEI-GQLQ 250

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           NL  +N++DN L +LP+++G    L EL L  N+++ L ++I  L NL++L    N L  
Sbjct: 251 NLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTA 310

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA-IGHL---TN 496
           LP  +G L+ L+ L+L  N+L  LP EIG L+ LQ L L  N L    R  I  L   +N
Sbjct: 311 LPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 370

Query: 497 LSYLSVGENNL-------------------------QSIPEEIGTLENLHTLYLNDNTCL 531
           L    V E+ +                         Q  P+ I    NL  LYL D    
Sbjct: 371 LDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYD-CGF 429

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           + +P E++   NL+ ++L    L +IPSEI
Sbjct: 430 STLPKEISRLKNLKYLALGLNGLKKIPSEI 459



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 105/199 (52%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  N+  L L     + LP  + +L +L+ L L  N L  +PS+IG + NL  L L  N 
Sbjct: 415 KFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANE 474

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP  +  L+ L+ L L  N L   P  + +L  L+ L L  N+  T   +I  L NL
Sbjct: 475 LERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENL 534

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L+++ N++  LP E+ +LKNL  LDL  N    LPKEIG    L TLDL++N+L  +P
Sbjct: 535 QTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 594

Query: 279 DMLGNLINLTRLRLSYNRL 297
             +G L NL  L L  N+ 
Sbjct: 595 TEIGQLQNLQWLYLQNNQF 613


>gi|418712123|ref|ZP_13272868.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791390|gb|EKR85066.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 475

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 155/415 (37%), Positives = 232/415 (55%), Gaps = 3/415 (0%)

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
            + T L  +++    +  L L   KL  LP +IG + NL  L L+ NSLT+LP  +  L+
Sbjct: 35  GTYTDLAKALQNPLKVRTLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLE 94

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
            L+ L+L   KL  LP  + +L +L+ L L FN + T+  ++  L NL  L +  N++  
Sbjct: 95  NLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLAT 154

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+G+LKNL  LDL  N L  LPKEI     L  LDL  N+L  +P  +G L NL  L
Sbjct: 155 LPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTL 214

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L   +L ++P+ + +  +L   N+    L++LP   +  L ++  + L  N+ TA P  
Sbjct: 215 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKE-IGELQNLEILVLRENRITALPK- 272

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              Q  ++  ++   NQ+  +P  I  + +NL ++++  N LT+LP ++G    L EL L
Sbjct: 273 EIGQLQNLQWLDLHQNQLTTLPKEI-GQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCL 331

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             NQ++ L ++I+ L NL VL L NN L  LP  +  L+ L+ L L  N+L +LP EIG 
Sbjct: 332 DENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQ 391

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
           L+ LQ L L SNQL +LP+ IG L NL  L + EN L + P+EI  L+NL  L+L
Sbjct: 392 LQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHL 446



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 148/404 (36%), Positives = 230/404 (56%), Gaps = 8/404 (1%)

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           T L  +L N  ++R LDLR+ KL  LP  + +L +L+ L L FN + T+  ++  L NL 
Sbjct: 38  TDLAKALQNPLKVRTLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQ 97

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L++   K+  LP E+G+L+NL  LDL+ N L  LPKE+G    L  LDL  N L  +P 
Sbjct: 98  RLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPM 157

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNI 337
            +G L NL  L L+ N+L ++P+ + +  +L E ++    L++LP   G L +L ++N I
Sbjct: 158 EIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLI 217

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
                + T  P     +  ++ ++N   NQ+  +P  I    +NL  + +++N +T+LP 
Sbjct: 218 V---TQLTTLPKE-IGELQNLKTLNLLDNQLTTLPKEI-GELQNLEILVLRENRITALPK 272

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++G    L  L+L  NQ++ L ++I  L NL+ L L  N L  LP  IG L+ L+ L L+
Sbjct: 273 EIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLD 332

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
           EN+L +LP EI  L+ L+ L L +NQL +LP+ +  L +L  L++G N L ++P+EIG L
Sbjct: 333 ENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQL 392

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +NL  L L  N  L  +P E+    NLQ + LD   L+  P EI
Sbjct: 393 QNLQVLGLISNQ-LTTLPKEIGQLQNLQELCLDENQLTTFPKEI 435



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 146/408 (35%), Positives = 225/408 (55%), Gaps = 26/408 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS +S+T LP  V +L +L+ L L   KL +LP +IG + NL  L L+ NSLT+
Sbjct: 72  NLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTT 131

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L+ L+ LDL  N+L  LPM + +L +L+ L L  N++ T+  +I+ L NL  L
Sbjct: 132 LPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQEL 191

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  LP E+G+L+NL TL+L    L  LPKEIG    L TL+L  N+L  +P  +
Sbjct: 192 DLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI 251

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L L  NR+ ++P+ + +  +L   ++    L++LP  +              
Sbjct: 252 GELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEI-------------- 297

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                       Q  ++  ++   NQ+  +P  I  + +NL ++ + +N LT+LP ++  
Sbjct: 298 -----------GQLQNLQRLDLHQNQLTTLPKEI-GQLQNLQELCLDENQLTTLPKEIEQ 345

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L+L  NQ++ L +++  L +L+VL L +N L  LP  IG L+ L+ L L  N+L
Sbjct: 346 LQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQL 405

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            +LP EIG L+ LQ L L  NQL + P+ I  L NL  L +  N L S
Sbjct: 406 TTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 453



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 96/174 (55%), Gaps = 23/174 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL ++ +T LP  + +L +L+ L L+ N+L +LP +IG + NL  L L EN LT
Sbjct: 278 QNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLT 337

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ LRVLDL +N+L  LP  V +L SL++L L  NR+ T+  +I  L NL +
Sbjct: 338 TLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQV 397

Query: 221 LSMRDNKIRELPPELG-----------------------ELKNLVTLDLAHNHL 251
           L +  N++  LP E+G                       +LKNL  L L  N L
Sbjct: 398 LGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 451


>gi|255087408|ref|XP_002505627.1| predicted protein [Micromonas sp. RCC299]
 gi|226520897|gb|ACO66885.1| predicted protein [Micromonas sp. RCC299]
          Length = 573

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 167/516 (32%), Positives = 265/516 (51%), Gaps = 52/516 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L  + +T LP  + +LT LE L L+GN+L S+P++IG +T L  L LA N L S+P  
Sbjct: 33  LSLHGNELTSLPAEIGQLTSLEGLRLFGNQLTSVPAEIGQLTALRELSLAANRLMSVPAE 92

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  LR L+L  N+L  +P  + +LTSL+ L L  NR+ +V  +I  L++L +L +  
Sbjct: 93  IGQLTSLRELNLNSNQLTNVPAEIGQLTSLEGLRLYGNRLTSVPEEIGQLTSLVVLVLGG 152

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+   +P E+G+L  L  L L  N L  +P EIG  T L  L L  N+L ++P  +G L 
Sbjct: 153 NQFTSVPAEIGQLTALRELRLDGNRLTSVPAEIGQLTSLGELSLSGNQLTSVPAEIGQLT 212

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD-------------------- 325
            L  L L YN+L S+P  + +   L    ++   L+S+P                     
Sbjct: 213 LLKGLELYYNQLTSLPAEIGQLTSLEHLLLDNNQLTSVPAEIRELRAAGCRVDLDDGHWE 272

Query: 326 -----------------GLLSSL-------TSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
                            GL+ +L       +++  + L  N  T+ P+    Q TS+ + 
Sbjct: 273 GVTMENGRVVKLDLVEFGLIGALPAEVGRLSALRWLQLGGNNLTSVPAE-IGQLTSLMTF 331

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
               N++  +P  I  +  +L  + +  N L S+P ++G    LT L L +N+++ +  +
Sbjct: 332 GLSDNKLTSVPAEI-GQLTSLEVLYLDHNRLASMPAEIGRLTSLTTLFLSSNRLTSVPAE 390

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL-PNEIGFLKELQRLILQ 480
           I  L +L+ L LS N L  +P++I +LR   C  LE+  L  L P EIG L  L+ L L 
Sbjct: 391 IGQLTSLKGLHLSRNQLTSVPAAIRDLRAAGC-RLEDCDLTGLLPAEIGCLGALRLLQLA 449

Query: 481 SNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELAL 540
            N+L S+P  IG LT+L  L +  N L S+P EIG L +L  LYL+ N  L ++P E+  
Sbjct: 450 GNELTSVPAEIGQLTSLEVLELSRNKLTSVPVEIGQLTSLERLYLSSNR-LTSLPAEIGQ 508

Query: 541 CSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
            ++L+ + LD+  L+ +P+EI   G    +++  +Q
Sbjct: 509 LTSLKRLYLDHNQLTSVPAEI---GQLAALQWFDLQ 541



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 121/240 (50%), Gaps = 48/240 (20%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           +++   LS + +T +P  + +LT LE LYL  N+LAS+P++IG +T+LT L L+ N LTS
Sbjct: 327 SLMTFGLSDNKLTSVPAEIGQLTSLEVLYLDHNRLASMPAEIGRLTSLTTLFLSSNRLTS 386

Query: 162 LPDSLANLQ----------------------------------------------QLRVL 175
           +P  +  L                                                LR+L
Sbjct: 387 VPAEIGQLTSLKGLHLSRNQLTSVPAAIRDLRAAGCRLEDCDLTGLLPAEIGCLGALRLL 446

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
            L  N+L  +P  + +LTSL++L L  N++ +V  +I  L++L  L +  N++  LP E+
Sbjct: 447 QLAGNELTSVPAEIGQLTSLEVLELSRNKLTSVPVEIGQLTSLERLYLSSNRLTSLPAEI 506

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
           G+L +L  L L HN L  +P EIG    L   DLQ NEL ++P  +G L+   RLR S+N
Sbjct: 507 GQLTSLKRLYLDHNQLTSVPAEIGQLAALQWFDLQRNELTSVPAEIGQLLR-GRLR-SWN 564


>gi|418755283|ref|ZP_13311490.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964294|gb|EKO32184.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 557

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 162/464 (34%), Positives = 257/464 (55%), Gaps = 4/464 (0%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  L+L  + ++ L   +  L  LE L L  N+L SLP++IG +  L  L L  N 
Sbjct: 59  KLENLEKLNLVNNQLSVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLENNQ 118

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  L   +  LQ+L  L L++N+L  LP  + KL  L+ L L  N++  +  +I  L  L
Sbjct: 119 LAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKL 178

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             LS+++N++  LP ++G+L+ L  L+L HN L  L +EIG    L  L L++N+L  +P
Sbjct: 179 EWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLENNQLTVLP 238

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L  L  L L  N+L S+P+ +     L   ++    L +LP  +   L ++ ++ 
Sbjct: 239 QEIGKLQKLEVLCLKNNKLGSLPQEIGTLRRLRFLSLVNNRLKTLPREIW-KLQNLKDLY 297

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           L  N+F   P     Q  ++  ++  +NQ+  +P  I+ + +NL  + + DN LT LP +
Sbjct: 298 LGDNQFRTLPK-EIDQLQNLEGLDVSNNQLVTLPNEIW-KLQNLKWLYLDDNQLTVLPQE 355

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L  L L  NQ++ L ++I  L  L+ L LSNN L+ LP  IG L++L+ L+LE 
Sbjct: 356 IGQLENLESLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEH 415

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L +LP EI  L+ L+ LIL +N+L +LP+ I  L  L +L +  N L S+P+EI  L+
Sbjct: 416 NQLAALPQEIDQLQNLEDLILSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEIDQLQ 475

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           NL  L L++N  L  +P E+    +L+ + L   P +  P EIV
Sbjct: 476 NLEYLDLSNNQ-LRTLPNEIGQLQSLEDLDLSGNPFATFPKEIV 518



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 162/460 (35%), Positives = 253/460 (55%), Gaps = 4/460 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS + +  LP  + KL +LE+L L  N+L+ L  +IG +  L  L L  N L S
Sbjct: 39  NVRILDLSDNQLATLPNEIGKLENLEKLNLVNNQLSVLVQEIGTLQKLEWLSLKNNRLES 98

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP+ +  L++L  L+L +N+L  L   +  L  L+ L L+ NR++++   I  L  L  L
Sbjct: 99  LPNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHL 158

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++  N++  L  E+G L+ L  L L +N LE LP +IG    L  L+L+HN+L  +   +
Sbjct: 159 NLEHNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEI 218

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  L  L L  N+L  +P+ + K   L    ++   L SLP   + +L  +  ++L  
Sbjct: 219 GTLQKLEWLSLENNQLTVLPQEIGKLQKLEVLCLKNNKLGSLPQE-IGTLRRLRFLSLVN 277

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+    P     +  ++  +    NQ   +P  I  + +NL  +++ +N L +LP ++  
Sbjct: 278 NRLKTLPR-EIWKLQNLKDLYLGDNQFRTLPKEI-DQLQNLEGLDVSNNQLVTLPNEIWK 335

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L L  NQ++ L ++I  L NLE L+LSNN L  LP  IG L+KL+ L+L  N+L
Sbjct: 336 LQNLKWLYLDDNQLTVLPQEIGQLENLESLILSNNQLTTLPQEIGTLQKLQYLNLSNNQL 395

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            +LP EIG L+EL+ L L+ NQL +LP+ I  L NL  L +  N L+++P+EI  L  L 
Sbjct: 396 RTLPQEIGTLQELEWLNLEHNQLAALPQEIDQLQNLEDLILSNNRLKTLPKEIWKLRKLE 455

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            LYL +N  L ++P E+    NL+ + L N  L  +P+EI
Sbjct: 456 WLYLKNNK-LGSLPKEIDQLQNLEYLDLSNNQLRTLPNEI 494



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 152/424 (35%), Positives = 223/424 (52%), Gaps = 33/424 (7%)

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           D+L N   +R+LDL  N+L  LP  + KL +L+ L L  N++  +  +I  L  L  LS+
Sbjct: 32  DALKNPMNVRILDLSDNQLATLPNEIGKLENLEKLNLVNNQLSVLVQEIGTLQKLEWLSL 91

Query: 224 RDNKIRELP-----------------------PELGELKNLVTLDLAHNHLEELPKEIGN 260
           ++N++  LP                        E+G L+ L  L L +N LE LP +IG 
Sbjct: 92  KNNRLESLPNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGK 151

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  L+L+HN+L  +   +G L  L  L L  NRLES+P  + K   L   N+E   L
Sbjct: 152 LRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQL 211

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIP--YGIFS 377
           + L    + +L  +  ++L  N+ T  P   G  Q   V  +  ++N++  +P   G   
Sbjct: 212 AVLVQE-IGTLQKLEWLSLENNQLTVLPQEIGKLQKLEVLCL--KNNKLGSLPQEIGTLR 268

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           R + LS VN   N L +LP ++     L +L LG NQ   L ++I  L NLE L +SNN 
Sbjct: 269 RLRFLSLVN---NRLKTLPREIWKLQNLKDLYLGDNQFRTLPKEIDQLQNLEGLDVSNNQ 325

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L  LP+ I  L+ LK L L++N+L  LP EIG L+ L+ LIL +NQL +LP+ IG L  L
Sbjct: 326 LVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLENLESLILSNNQLTTLPQEIGTLQKL 385

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
            YL++  N L+++P+EIGTL+ L  L L  N  L  +P E+    NL+ + L N  L  +
Sbjct: 386 QYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQ-LAALPQEIDQLQNLEDLILSNNRLKTL 444

Query: 558 PSEI 561
           P EI
Sbjct: 445 PKEI 448



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 89/144 (61%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
            S+ ++N +N+ +L LS+N L  LP+ IG L  L+ L+L  N+L  L  EIG L++L+ L
Sbjct: 30  FSDALKNPMNVRILDLSDNQLATLPNEIGKLENLEKLNLVNNQLSVLVQEIGTLQKLEWL 89

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L++N+L SLP  IG L  L +L++  N L  + +EIGTL+ L  L L +N  L ++P +
Sbjct: 90  SLKNNRLESLPNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLKNNR-LESLPNK 148

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +     L+ ++L++  L+ +  EI
Sbjct: 149 IGKLRKLEHLNLEHNQLAVLVQEI 172


>gi|410451706|ref|ZP_11305708.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014472|gb|EKO76602.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 515

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 163/453 (35%), Positives = 242/453 (53%), Gaps = 59/453 (13%)

Query: 55  KKCGVDVKKTVTVKHPESNK-----PKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLS 109
           K+ GV    T   +HP   +     P+      +P+     + KE    K +N+ +LDLS
Sbjct: 89  KEKGVYYNLTEAFQHPTDVQYLYLGPRERKHSNDPLWT---LPKEI--GKLQNLRDLDLS 143

Query: 110 KSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANL 169
            + +  LP  + KL  L++L L  N+LA+LP +IG + NL  L L  N L +LP+ + NL
Sbjct: 144 SNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQELDLEGNQLATLPEEIGNL 203

Query: 170 QQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR 229
           Q L+ LDL  N+L  LP  + KL +LK LYL  NR+ T   +I+ L NL +LS+ +N++ 
Sbjct: 204 QNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTFPKEIEDLQNLKILSLGNNQLT 263

Query: 230 ELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTR 289
            LP E+G+L+NL  +  + N L  LPKEIGN   L  L L HN+L  +P  +GNL NL +
Sbjct: 264 TLPKEVGKLQNLQEMKSSKNQLTTLPKEIGNLQNLQELYLAHNQLTALPKEIGNLQNLQQ 323

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS 349
           L L  N+L ++P             +E           + +L ++  + L  NK TA+P 
Sbjct: 324 LYLYGNQLTTLP-------------IE-----------IGNLQNLQGLHLGNNKLTAFPK 359

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
                         E   + K+ +           + +  N LT++P ++G    L ELN
Sbjct: 360 --------------EIGNLQKLKW-----------LGLNKNQLTTIPKEIGNLQNLKELN 394

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           L +NQ++ + ++I+NL NL+VL L+NN L  LP  IGNL+ LK LDL  N+L +LP EIG
Sbjct: 395 LSSNQLTTIPKEIENLQNLQVLDLNNNQLTALPKEIGNLQNLKELDLTSNRLTTLPKEIG 454

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
            L+ L+ L L +N L S P  IG L +L  L +
Sbjct: 455 NLQSLESLDLSNNPLTSFPEEIGKLQHLKRLRL 487



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/399 (35%), Positives = 216/399 (54%), Gaps = 27/399 (6%)

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           + + L +LP  +  LQ LR LDL  N+L  LP  + KL  L+ L L  NR+  +  +I  
Sbjct: 120 SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGK 179

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL  L +  N++  LP E+G L+NL TLDL  N L  LPKEIG    L  L L +N L
Sbjct: 180 LQNLQELDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRL 239

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
              P  + +L NL  L L  N+L ++P+ + K  +L E       L++LP  +  +L ++
Sbjct: 240 TTFPKEIEDLQNLKILSLGNNQLTTLPKEVGKLQNLQEMKSSKNQLTTLPKEI-GNLQNL 298

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + L+ N+ TA P                               +NL ++ +  N LT+
Sbjct: 299 QELYLAHNQLTALPKE-------------------------IGNLQNLQQLYLYGNQLTT 333

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP+++G    L  L+LG N+++   ++I NL  L+ L L+ N L  +P  IGNL+ LK L
Sbjct: 334 LPIEIGNLQNLQGLHLGNNKLTAFPKEIGNLQKLKWLGLNKNQLTTIPKEIGNLQNLKEL 393

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           +L  N+L ++P EI  L+ LQ L L +NQL +LP+ IG+L NL  L +  N L ++P+EI
Sbjct: 394 NLSSNQLTTIPKEIENLQNLQVLDLNNNQLTALPKEIGNLQNLKELDLTSNRLTTLPKEI 453

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           G L++L +L L++N  L + P E+    +L+ + L+N P
Sbjct: 454 GNLQSLESLDLSNNP-LTSFPEEIGKLQHLKRLRLENIP 491



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/359 (37%), Positives = 204/359 (56%), Gaps = 14/359 (3%)

Query: 209 HP-DIQYLSNLSMLSMRDNK-----IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           HP D+QYL     L  R+ K     +  LP E+G+L+NL  LDL+ N L  LPKEIG   
Sbjct: 103 HPTDVQYL----YLGPRERKHSNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQ 158

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  L+L  N L N+P+ +G L NL  L L  N+L ++PE +    +L   ++EG  L++
Sbjct: 159 KLQKLNLTRNRLANLPEEIGKLQNLQELDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTT 218

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LP  +   L ++  + L  N+ T +P        ++  ++  +NQ+  +P  +  + +NL
Sbjct: 219 LPKEI-GKLQNLKKLYLYNNRLTTFPKE-IEDLQNLKILSLGNNQLTTLPKEV-GKLQNL 275

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
            ++    N LT+LP ++G    L EL L  NQ++ L ++I NL NL+ L L  N L  LP
Sbjct: 276 QEMKSSKNQLTTLPKEIGNLQNLQELYLAHNQLTALPKEIGNLQNLQQLYLYGNQLTTLP 335

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
             IGNL+ L+ L L  NKL + P EIG L++L+ L L  NQL ++P+ IG+L NL  L++
Sbjct: 336 IEIGNLQNLQGLHLGNNKLTAFPKEIGNLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNL 395

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             N L +IP+EI  L+NL  L LN+N  L  +P E+    NL+ + L +  L+ +P EI
Sbjct: 396 SSNQLTTIPKEIENLQNLQVLDLNNNQ-LTALPKEIGNLQNLKELDLTSNRLTTLPKEI 453



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 136/377 (36%), Positives = 204/377 (54%), Gaps = 27/377 (7%)

Query: 185 LPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTL 244
           LP  + KL +L+ L L  N++ T+  +I  L  L  L++  N++  LP E+G+L+NL  L
Sbjct: 127 LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQEL 186

Query: 245 DLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETL 304
           DL  N L  LP+EIGN   L TLDL+ N+L  +P  +G L NL +L L  NRL + P+ +
Sbjct: 187 DLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTFPKEI 246

Query: 305 SKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFE 364
               +L   ++    L++LP  +   L ++  +  S+N+ T  P                
Sbjct: 247 EDLQNLKILSLGNNQLTTLPKEV-GKLQNLQEMKSSKNQLTTLPKE-------------- 291

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN 424
                          +NL ++ +  N LT+LP ++G    L +L L  NQ++ L  +I N
Sbjct: 292 -----------IGNLQNLQELYLAHNQLTALPKEIGNLQNLQQLYLYGNQLTTLPIEIGN 340

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           L NL+ L L NN L   P  IGNL+KLK L L +N+L ++P EIG L+ L+ L L SNQL
Sbjct: 341 LQNLQGLHLGNNKLTAFPKEIGNLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQL 400

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
            ++P+ I +L NL  L +  N L ++P+EIG L+NL  L L  N  L  +P E+    +L
Sbjct: 401 TTIPKEIENLQNLQVLDLNNNQLTALPKEIGNLQNLKELDLTSNR-LTTLPKEIGNLQSL 459

Query: 545 QIMSLDNCPLSQIPSEI 561
           + + L N PL+  P EI
Sbjct: 460 ESLDLSNNPLTSFPEEI 476


>gi|440789611|gb|ELR10917.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 911

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 153/459 (33%), Positives = 248/459 (54%), Gaps = 33/459 (7%)

Query: 107 DLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSL 166
           DL +  +T +P +V ++ +L  L LY NK+ SLP  +G +T L  LGL ENSL +LP+ L
Sbjct: 459 DLRRKELTAVPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKLKALGLNENSLRTLPNEL 518

Query: 167 ANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDN 226
             L  L +LDLR+NKL ELP  +  L  L  L+LR+NR++ +  +I  L +L MLS+R+N
Sbjct: 519 GQLTSLTMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQLPEEIGCLVSLEMLSVRNN 578

Query: 227 KIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           ++ +LP +L    NL  LD++ NHL +  + +     L  LDL+ N+L  +    G L +
Sbjct: 579 QLHKLPRKLSMATNLKILDISTNHLTKF-RSVEKLCQLKDLDLKQNKLTTLQGGWGALTD 637

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L RL +S N+LE  P T+++   L   ++E  A    P+  + ++TS+ ++ L RNK  A
Sbjct: 638 LMRLDVSQNKLEEFPVTITELPRLETLDLEVLA----PE--IGNMTSLRSLYLGRNKLIA 691

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                        G+ +    L ++++K N L ++P +L   V L 
Sbjct: 692 LPA----------------------ELGMLT---GLRELHLKGNRLKAIPPELSALVNLK 726

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+L TN+     +       L  L +S+N +K+L + IG L  LK L+L+EN+L+ LP 
Sbjct: 727 HLDLSTNEFQTFPDARCFPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLPG 786

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
           EI  L  L  L +  N+L++LP  IG ++ +  L +  N +  +P+ IG L  L    + 
Sbjct: 787 EISLLTGLTELRVGYNELLTLPHEIGDISLIKQLHLEHNKMVELPKSIGNLSALELFVVT 846

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGG 565
           DN  LN++P E+   ++L  + +D  P   +P+ +   G
Sbjct: 847 DN-LLNDLPNEMVNMTSLSELKVDGNPFDNLPAAVRGAG 884



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 114/210 (54%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +L L ++ +  LP  +  LT L EL+L GN+L ++P ++  + NL  L L+ N   + PD
Sbjct: 681 SLYLGRNKLIALPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKHLDLSTNEFQTFPD 740

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
           +      L  L++  N++  L   +  LT+LK L L  N++  +  +I  L+ L+ L + 
Sbjct: 741 ARCFPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLPGEISLLTGLTELRVG 800

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
            N++  LP E+G++  +  L L HN + ELPK IGN + L    +  N L ++P+ + N+
Sbjct: 801 YNELLTLPHEIGDISLIKQLHLEHNKMVELPKSIGNLSALELFVVTDNLLNDLPNEMVNM 860

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFN 314
            +L+ L++  N  +++P  +      + +N
Sbjct: 861 TSLSELKVDGNPFDNLPAAVRGAGGRDTYN 890



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 1/119 (0%)

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
           S  G+   L+  DL   +L ++P+ +  +K L  L L  N++ SLP  +G LT L  L +
Sbjct: 447 SGSGSAGGLQSYDLRRKELTAVPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKLKALGL 506

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            EN+L+++P E+G L +L  L L  N  L  +P  +    +L  + L    L Q+P EI
Sbjct: 507 NENSLRTLPNELGQLTSLTMLDLRYNK-LTELPATIKHLVHLNKLFLRYNRLEQLPEEI 564


>gi|455789995|gb|EMF41891.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 595

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 171/511 (33%), Positives = 251/511 (49%), Gaps = 54/511 (10%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L+LS   +T LP  + +L +L+EL L  N L  LP +IG + NL  L L +N L +
Sbjct: 49  NVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLAT 108

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
            P  +  LQ+L  LDL  N+L  LP  + +L +L+ L L  N++ T   +I  L NL  L
Sbjct: 109 FPAVIVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYKNKLTTFPKEIGQLQNLQKL 168

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + +N++  LP E+G+LKNL TLDL  N    LPKEIG    L TL+LQ N+L  +P  +
Sbjct: 169 WLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEI 228

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L L  NRL   P+ + +  +L         L++LP   +  L ++  + L  
Sbjct: 229 GQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLGSPENRLTALPKE-MGQLQNLQTLNLVN 287

Query: 342 NKFTAYPSGGPTQFTSVYSINF--------EHNQIDKI---------------------- 371
           N+ T +P     Q  ++  +          E  +I K+                      
Sbjct: 288 NRLTVFPK-EIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNL 346

Query: 372 ----PYGIFS-----------------RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
               P  +F                  + +NL  +N+ D   ++LP ++     L  L L
Sbjct: 347 AQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLAL 406

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
           G N +  +  +I  L NLE L L  N L++LP  IG LR L+ L L +N L+  P EI  
Sbjct: 407 GLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQ 466

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           LK+LQ+L L  NQ  + P+ IG L NL  L++  N L ++  EIG L+NL  L LNDN  
Sbjct: 467 LKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQ- 525

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
              +P E+     LQ + L N  L+ +P+EI
Sbjct: 526 FTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 163/459 (35%), Positives = 246/459 (53%), Gaps = 16/459 (3%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS++ +  LP  + +L +L++L LY NKL + P +IG + NL  L L+EN LT+LP  
Sbjct: 122 LDLSENRLIILPNEIGQLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE 181

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ LDL+ N+   LP  + +L +L+ L L+ N++ T+  +I  L NL  L +R+
Sbjct: 182 IGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN 241

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++   P E+G+L+NL  L    N L  LPKE+G    L TL+L +N L   P  +G L 
Sbjct: 242 NRLTVFPKEIGQLQNLQMLGSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQ 301

Query: 286 NLTRLRLSYNRLESVPE--TLSKCVHLNEFNVEGCALSSLPDGLLSSLT-------SINN 336
           NL  L L  N L S+ E   + K    +  ++   A     +G+  +L         +  
Sbjct: 302 NLQDLELLMNPL-SLKERKRIQKLFPDSNLDLREVA----ENGVYRNLNLAQEEPLKVFE 356

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           ++L    F+        +F ++  +N        +P  I SR KNL  + +  N L ++P
Sbjct: 357 LSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKNIP 415

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  LNL  N++ +L ++I  L NL+ L L  N LK  P+ I  L+KL+ LDL
Sbjct: 416 SEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDL 475

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+  + P EIG L+ LQ L LQ NQL +L   IG L NL  L + +N    +P+EIG 
Sbjct: 476 SVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGK 535

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           L+ L TL L +N  L  +P E+    NLQ + L N  LS
Sbjct: 536 LKKLQTLDLRNNQ-LTTLPTEIGQLQNLQWLYLQNNQLS 573



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 149/436 (34%), Positives = 237/436 (54%), Gaps = 32/436 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L L K+ +T  P  + +L +L++L+L  N+L +LP +IG + NL  L L +N  T
Sbjct: 140 QNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFT 199

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ L+ L+L+ N+L  LP+ + +L +L+ LYLR NR+     +I  L NL M
Sbjct: 200 TLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQM 259

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL------ 274
           L   +N++  LP E+G+L+NL TL+L +N L   PKEIG    L  L+L  N L      
Sbjct: 260 LGSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERK 319

Query: 275 ----------VNIPDMLGNLI----NLTR--------LRLSYNRL-ESVPETLSKCVHLN 311
                     +++ ++  N +    NL +        L L Y    +S P+ + K  +L 
Sbjct: 320 RIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLR 379

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
             N+  C  S+LP  + S L ++  + L  N     PS    Q  ++ ++N E N+++++
Sbjct: 380 GLNLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKNIPSE-IGQLKNLEALNLEANELERL 437

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + +NL K+++  N L   P ++     L +L+L  NQ +   ++I  L NL+ L
Sbjct: 438 PKEI-GQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTL 496

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  L + IG L+ L+ LDL +N+   LP EIG LK+LQ L L++NQL +LP  I
Sbjct: 497 NLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556

Query: 492 GHLTNLSYLSVGENNL 507
           G L NL +L +  N L
Sbjct: 557 GQLQNLQWLYLQNNQL 572



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 108/200 (54%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            K  N+  L+L     + LP  + +L +L+ L L  N L ++PS+IG + NL  L L  N
Sbjct: 373 LKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEAN 432

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L  LP  +  L+ L+ L L  N L   P  + +L  L+ L L  N+  T   +I  L N
Sbjct: 433 ELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLEN 492

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L+++ N++  L  E+G+L+NL  LDL  N    LPKEIG    L TLDL++N+L  +
Sbjct: 493 LQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTL 552

Query: 278 PDMLGNLINLTRLRLSYNRL 297
           P  +G L NL  L L  N+L
Sbjct: 553 PTEIGQLQNLQWLYLQNNQL 572



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N   ++ L+L   KL +LP EIG LK LQ L L+ N L  LP+ IG L NL 
Sbjct: 38  RDLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQ 97

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L + +N L + P  I  L+ L +L L++N  +  +P E+    NLQ + L    L+  P
Sbjct: 98  ELDLRDNQLATFPAVIVELQKLESLDLSENRLI-ILPNEIGQLQNLQDLGLYKNKLTTFP 156

Query: 559 SEI 561
            EI
Sbjct: 157 KEI 159


>gi|254410000|ref|ZP_05023780.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196183036|gb|EDX78020.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1115

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 149/423 (35%), Positives = 242/423 (57%), Gaps = 3/423 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS + +T +P S+ +L +L EL L  N+L  +P  I  + NLT L L+ N LT +P+S
Sbjct: 4   LNLSGNQLTQVPESISQLVNLTELDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQVPES 63

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L  L+L  N+L ++P  + +L +L  L L  N++  V   I  L NL+ LS+  
Sbjct: 64  ITQLVNLTKLNLSVNQLTQVPESISQLVNLTKLNLSGNQLTQVSESISQLVNLTQLSLSG 123

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++ + P  + +L NL  L L+ N L ++P+ I     L  L+L +N+L  +P+ +  L+
Sbjct: 124 NQLTQFPESISQLVNLTQLSLSRNQLTQVPESISQLVNLTQLNLSYNQLTQVPESISQLV 183

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NLT+L LS N+L  VPE++S+ V+L + N+    L+ + +  +S L ++  ++LS NK T
Sbjct: 184 NLTQLDLSVNKLTQVPESISQLVNLTQLNLSYNQLTQVSES-ISQLVNLTQLSLSGNKLT 242

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
              S   +Q  ++  ++   N++ ++P  I S+  NL+++++ DN LT +   +   V L
Sbjct: 243 QV-SESISQLVNLTQLSLSGNKLTQVPESI-SQLVNLTQLSLSDNQLTQVSESISQLVNL 300

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
           T+L+L +NQ++++SE I  LVNL  L LS+N L ++  SI  L  L  L+L  NKL  +P
Sbjct: 301 TQLDLSSNQLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLVNLTQLNLSINKLTQVP 360

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
             I  L  L  L L  NQL  +P +I  L NL+ L +  N +  IP+ +  L NL  L L
Sbjct: 361 ESISQLVNLTWLNLSDNQLTQVPESISQLVNLTQLDLFGNKITEIPDWLEELPNLKELDL 420

Query: 526 NDN 528
             N
Sbjct: 421 RQN 423



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 151/441 (34%), Positives = 246/441 (55%), Gaps = 6/441 (1%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           + +L L GN+L  +P  I  + NLT L L+ N LT +P+S++ L  L  LDL HN+L ++
Sbjct: 1   MTQLNLSGNQLTQVPESISQLVNLTELDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQV 60

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  + +L +L  L L  N++  V   I  L NL+ L++  N++ ++   + +L NL  L 
Sbjct: 61  PESITQLVNLTKLNLSVNQLTQVPESISQLVNLTKLNLSGNQLTQVSESISQLVNLTQLS 120

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           L+ N L + P+ I     L  L L  N+L  +P+ +  L+NLT+L LSYN+L  VPE++S
Sbjct: 121 LSGNQLTQFPESISQLVNLTQLSLSRNQLTQVPESISQLVNLTQLNLSYNQLTQVPESIS 180

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
           + V+L + ++    L+ +P+  +S L ++  + LS N+ T   S   +Q  ++  ++   
Sbjct: 181 QLVNLTQLDLSVNKLTQVPES-ISQLVNLTQLNLSYNQLTQV-SESISQLVNLTQLSLSG 238

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           N++ ++   I S+  NL+++++  N LT +P  +   V LT+L+L  NQ++++SE I  L
Sbjct: 239 NKLTQVSESI-SQLVNLTQLSLSGNKLTQVPESISQLVNLTQLSLSDNQLTQVSESISQL 297

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
           VNL  L LS+N L ++  SI  L  L  LDL  N+L  +   I  L  L +L L  N+L 
Sbjct: 298 VNLTQLDLSSNQLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLVNLTQLNLSINKLT 357

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
            +P +I  L NL++L++ +N L  +PE I  L NL  L L  N  +  IP  L    NL+
Sbjct: 358 QVPESISQLVNLTWLNLSDNQLTQVPESISQLVNLTQLDLFGNK-ITEIPDWLEELPNLK 416

Query: 546 IMSLDNCPLSQIPSEIVVGGP 566
            + L   PL   P   ++G P
Sbjct: 417 ELDLRQNPLPISPE--ILGSP 435



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 141/415 (33%), Positives = 240/415 (57%), Gaps = 3/415 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS + +T +P S+ +L +L +L L  N+L  +P  I  + NLT L L+ N LT 
Sbjct: 23  NLTELDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQVPESITQLVNLTKLNLSVNQLTQ 82

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P+S++ L  L  L+L  N+L ++   + +L +L  L L  N++      I  L NL+ L
Sbjct: 83  VPESISQLVNLTKLNLSGNQLTQVSESISQLVNLTQLSLSGNQLTQFPESISQLVNLTQL 142

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           S+  N++ ++P  + +L NL  L+L++N L ++P+ I     L  LDL  N+L  +P+ +
Sbjct: 143 SLSRNQLTQVPESISQLVNLTQLNLSYNQLTQVPESISQLVNLTQLDLSVNKLTQVPESI 202

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L+NLT+L LSYN+L  V E++S+ V+L + ++ G  L+ + +  +S L ++  ++LS 
Sbjct: 203 SQLVNLTQLNLSYNQLTQVSESISQLVNLTQLSLSGNKLTQVSES-ISQLVNLTQLSLSG 261

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           NK T  P    +Q  ++  ++   NQ+ ++   I S+  NL+++++  N LT +   +  
Sbjct: 262 NKLTQVPE-SISQLVNLTQLSLSDNQLTQVSESI-SQLVNLTQLDLSSNQLTQVSESISQ 319

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
            V LT+L+L +NQ++++SE I  LVNL  L LS N L ++P SI  L  L  L+L +N+L
Sbjct: 320 LVNLTQLDLSSNQLTQVSESISQLVNLTQLNLSINKLTQVPESISQLVNLTWLNLSDNQL 379

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             +P  I  L  L +L L  N++  +P  +  L NL  L + +N L   PE +G+
Sbjct: 380 TQVPESISQLVNLTQLDLFGNKITEIPDWLEELPNLKELDLRQNPLPISPEILGS 434



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 114/208 (54%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L LS + +T +  S+ +L +L +L L GNKL  +P  I  + NLT L L++N LT 
Sbjct: 230 NLTQLSLSGNKLTQVSESISQLVNLTQLSLSGNKLTQVPESISQLVNLTQLSLSDNQLTQ 289

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           + +S++ L  L  LDL  N+L ++   + +L +L  L L  N++  V   I  L NL+ L
Sbjct: 290 VSESISQLVNLTQLDLSSNQLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLVNLTQL 349

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++  NK+ ++P  + +L NL  L+L+ N L ++P+ I     L  LDL  N++  IPD L
Sbjct: 350 NLSINKLTQVPESISQLVNLTWLNLSDNQLTQVPESISQLVNLTQLDLFGNKITEIPDWL 409

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVH 309
             L NL  L L  N L   PE L    H
Sbjct: 410 EELPNLKELDLRQNPLPISPEILGSPYH 437


>gi|418752844|ref|ZP_13309101.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966796|gb|EKO34636.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 539

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 149/385 (38%), Positives = 220/385 (57%), Gaps = 5/385 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+ +LDLS + +T LP  +  L +L++L L  N+  +LP +I  +  L  L L  N 
Sbjct: 133 KLQNLRDLDLSSNQLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQ 192

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP+ +  LQ+L+ L L  N+   LP  + KL  LK L+L  NR  T+  +I+ L NL
Sbjct: 193 LTTLPEEIGKLQKLKELHLDGNQFTTLPKEIGKLQKLKELHLGSNRFTTLPKEIKKLQNL 252

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++  N+   LP E+G L+ L  L LAHN L  LPKEIG    L  L L  N+L  +P
Sbjct: 253 QWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWGNQLTTLP 312

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L +L  L L  N+L ++P+ + K   L    + G  L++LP   +  L S+  + 
Sbjct: 313 KEIGKLQSLQELILGKNQLTTIPKEIGKLQSLQSLTLWGNQLTTLPKE-IGKLQSLQELI 371

Query: 339 LSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
           L +N+ T  P      Q+    S++F  NQ+  IP  I  + +NL K+++++N LT+LP 
Sbjct: 372 LGKNQLTTIPKEIWQLQYLQRLSLSF--NQLTAIPKEI-EKLQNLQKLHLRNNQLTTLPK 428

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++G    L EL+LG NQ++ L E+I  L NL+ L L+NN L  LP  IG L+KLK L L 
Sbjct: 429 EIGNLQKLQELDLGYNQLTALPEEIGKLQNLKDLYLNNNKLTTLPKEIGKLQKLKDLYLN 488

Query: 458 ENKLESLPNEIGFLKELQRLILQSN 482
            NKL +LP EI  L++L+ L L  N
Sbjct: 489 NNKLTTLPKEIEKLQKLKNLHLADN 513



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 153/423 (36%), Positives = 230/423 (54%), Gaps = 26/423 (6%)

Query: 109 SKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLAN 168
           S   +  LP  + KL +L +L L  N+L +LP +IG + NL  L L  N  T+LP  + N
Sbjct: 120 SNDPLWTLPKEIGKLQNLRDLDLSSNQLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWN 179

Query: 169 LQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           LQ+L+ L L  N+L  LP  + KL  LK L+L  N+  T+  +I  L  L  L +  N+ 
Sbjct: 180 LQKLQKLSLGRNQLTTLPEEIGKLQKLKELHLDGNQFTTLPKEIGKLQKLKELHLGSNRF 239

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LP E+ +L+NL  L+L  N    LPKEIGN   L  L L HN+L  +P  +G L +L 
Sbjct: 240 TTLPKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQ 299

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
           RL L  N+L ++P+ + K   L E  +    L+++P  +   L S+ ++TL  N+ T  P
Sbjct: 300 RLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEI-GKLQSLQSLTLWGNQLTTLP 358

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                             +I K+        ++L ++ +  N LT++P ++     L  L
Sbjct: 359 K-----------------EIGKL--------QSLQELILGKNQLTTIPKEIWQLQYLQRL 393

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           +L  NQ++ + ++I+ L NL+ L L NN L  LP  IGNL+KL+ LDL  N+L +LP EI
Sbjct: 394 SLSFNQLTAIPKEIEKLQNLQKLHLRNNQLTTLPKEIGNLQKLQELDLGYNQLTALPEEI 453

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G L+ L+ L L +N+L +LP+ IG L  L  L +  N L ++P+EI  L+ L  L+L DN
Sbjct: 454 GKLQNLKDLYLNNNKLTTLPKEIGKLQKLKDLYLNNNKLTTLPKEIEKLQKLKNLHLADN 513

Query: 529 TCL 531
             L
Sbjct: 514 PFL 516



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 130/378 (34%), Positives = 208/378 (55%), Gaps = 6/378 (1%)

Query: 185 LPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTL 244
           LP  + KL +L+ L L  N++ T+  +I  L NL  L++  N+   LP E+  L+ L  L
Sbjct: 127 LPKEIGKLQNLRDLDLSSNQLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKL 186

Query: 245 DLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETL 304
            L  N L  LP+EIG    L  L L  N+   +P  +G L  L  L L  NR  ++P+ +
Sbjct: 187 SLGRNQLTTLPEEIGKLQKLKELHLDGNQFTTLPKEIGKLQKLKELHLGSNRFTTLPKEI 246

Query: 305 SKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINF 363
            K  +L   N++    ++LP  +  +L  +  ++L+ N+ T  P   G  Q  S+  +  
Sbjct: 247 KKLQNLQWLNLDSNRFTTLPKEI-GNLQKLQKLSLAHNQLTTLPKEIGKLQ--SLQRLTL 303

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
             NQ+  +P  I  + ++L ++ +  N LT++P ++G    L  L L  NQ++ L ++I 
Sbjct: 304 WGNQLTTLPKEI-GKLQSLQELILGKNQLTTIPKEIGKLQSLQSLTLWGNQLTTLPKEIG 362

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
            L +L+ L+L  N L  +P  I  L+ L+ L L  N+L ++P EI  L+ LQ+L L++NQ
Sbjct: 363 KLQSLQELILGKNQLTTIPKEIWQLQYLQRLSLSFNQLTAIPKEIEKLQNLQKLHLRNNQ 422

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
           L +LP+ IG+L  L  L +G N L ++PEEIG L+NL  LYLN+N  L  +P E+     
Sbjct: 423 LTTLPKEIGNLQKLQELDLGYNQLTALPEEIGKLQNLKDLYLNNNK-LTTLPKEIGKLQK 481

Query: 544 LQIMSLDNCPLSQIPSEI 561
           L+ + L+N  L+ +P EI
Sbjct: 482 LKDLYLNNNKLTTLPKEI 499



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/288 (35%), Positives = 158/288 (54%), Gaps = 27/288 (9%)

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L  +P  +G L NL  L LS N+L ++P+ +    +L + N+     ++LP  + + L  
Sbjct: 124 LWTLPKEIGKLQNLRDLDLSSNQLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWN-LQK 182

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           +  ++L RN+ T  P                  +I K+        + L ++++  N  T
Sbjct: 183 LQKLSLGRNQLTTLPE-----------------EIGKL--------QKLKELHLDGNQFT 217

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP ++G    L EL+LG+N+ + L ++I+ L NL+ L L +N    LP  IGNL+KL+ 
Sbjct: 218 TLPKEIGKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQK 277

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L L  N+L +LP EIG L+ LQRL L  NQL +LP+ IG L +L  L +G+N L +IP+E
Sbjct: 278 LSLAHNQLTTLPKEIGKLQSLQRLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKE 337

Query: 514 IGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           IG L++L +L L  N  L  +P E+    +LQ + L    L+ IP EI
Sbjct: 338 IGKLQSLQSLTLWGNQ-LTTLPKEIGKLQSLQELILGKNQLTTIPKEI 384


>gi|291224779|ref|XP_002732380.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
          Length = 1162

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 154/501 (30%), Positives = 263/501 (52%), Gaps = 33/501 (6%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           +  E   C E  +  LDLS + I+ +P S+  L  L EL +  N L S+P +IG + ++ 
Sbjct: 221 VPSEIGECHE--LQKLDLSFNKISKIPESLYALEQLTELNMRSNALTSVPDEIGKLKSMK 278

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L+ N +  +P SL  L++L  L++  N L  +P  + KL S++ L L FN+I  +  
Sbjct: 279 TLNLSSNKIEKIPASLCALEKLTELNMGSNALTSIPDEIGKLKSMETLDLSFNKIDKIPD 338

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
            +  L  L+ L M DN +  +P E+G+LK++ TL+L+ N +E++P  +     L  LD++
Sbjct: 339 SLCALEKLTELYMNDNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCTLEQLTELDMK 398

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC------ALSSLP 324
           +N L  IPD +  L ++  L L  N++E +P++L     L E ++         AL+S+P
Sbjct: 399 YNALTAIPDEISKLKSMNILNLDNNKMEKIPDSLCALQQLTELDMNDXXXMASNALTSIP 458

Query: 325 DGLLSSLTSINNITLSRNKFTAYPSG--GPTQFTSVYS--------------------IN 362
           D  +S L S+  + L  NK    P+      Q T +Y                     +N
Sbjct: 459 DE-ISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEISKLKSMKILN 517

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
              N+IDKIP  + +  K L+++NM  N LTS+P ++     +  LNL  N++ K+   +
Sbjct: 518 LYFNKIDKIPDSLCALEK-LTELNMASNALTSIPDEISKLKSMKILNLDNNKMKKIPASL 576

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L  L  L ++ N L  +P  IG L+ ++ L+L  NK+E +P+ +  L++L  L ++SN
Sbjct: 577 CALQQLTELYMNGNALTSIPDEIGKLKSMETLNLSFNKIEKIPDSLCALEQLTELNMRSN 636

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
            L S+P  IG L ++  L++  N ++ IP  +  L+ L  L +  N  L  IP E++   
Sbjct: 637 ALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALDQLTELIMRSNA-LTAIPDEISKLK 695

Query: 543 NLQIMSLDNCPLSQIPSEIVV 563
           +++I++LDN  + +IP  +  
Sbjct: 696 SMKILNLDNNKMEKIPDSLCA 716



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 150/498 (30%), Positives = 265/498 (53%), Gaps = 31/498 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS + I  +P S+  L  L ELY+  N L S+P +IG + ++  L L+ N +  +P S
Sbjct: 326 LDLSFNKIDKIPDSLCALEKLTELYMNDNALTSVPDEIGKLKSMKTLNLSSNKIEKIPAS 385

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L  L+QL  LD+++N L  +P  + KL S+ IL L  N+++ +   +  L  L+ L M D
Sbjct: 386 LCTLEQLTELDMKYNALTAIPDEISKLKSMNILNLDNNKMEKIPDSLCALQQLTELDMND 445

Query: 226 ------NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
                 N +  +P E+ +LK++  L+L +N ++++P  +     L  L +  N L +IPD
Sbjct: 446 XXXMASNALTSIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPD 505

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +  L ++  L L +N+++ +P++L     L E N+   AL+S+PD + S L S+  + L
Sbjct: 506 EISKLKSMKILNLYFNKIDKIPDSLCALEKLTELNMASNALTSIPDEI-SKLKSMKILNL 564

Query: 340 SRNKFTAYPSG--GPTQFTSVY--------------------SINFEHNQIDKIPYGIFS 377
             NK    P+      Q T +Y                    ++N   N+I+KIP  + +
Sbjct: 565 DNNKMKKIPASLCALQQLTELYMNGNALTSIPDEIGKLKSMETLNLSFNKIEKIPDSLCA 624

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
             + L+++NM+ N LTS+P ++G    +  LNL +N+I K+   +  L  L  L++ +N 
Sbjct: 625 -LEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALDQLTELIMRSNA 683

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L  +P  I  L+ +K L+L+ NK+E +P+ +  L++L  L ++SN L S+P  IG L ++
Sbjct: 684 LTAIPDEISKLKSMKILNLDNNKMEKIPDSLCALQQLTELDIRSNALTSIPDEIGKLKSM 743

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
             L++  N ++ IP+ +  LE L  L +  N  L  IP E+    ++  ++L    + +I
Sbjct: 744 KILNLDNNKMEKIPDSLCALEKLTDLNMEHNA-LTAIPDEIGKLKSMTTLNLSFNKIEKI 802

Query: 558 PSEIVVGGPSLIIRYLKM 575
           P  +  G   L + +L++
Sbjct: 803 PDSLCAGIKKLKLIHLRL 820



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/483 (29%), Positives = 254/483 (52%), Gaps = 52/483 (10%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L  ++L  +PS+IG    L  L L+ N ++ +P+SL  L+QL  L++R N L  +P  
Sbjct: 211 LNLKHSELTIVPSEIGECHELQKLDLSFNKISKIPESLYALEQLTELNMRSNALTSVPDE 270

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + KL S+K L L  N+I+ +   +  L  L+ L+M  N +  +P E+G+LK++ TLDL+ 
Sbjct: 271 IGKLKSMKTLNLSSNKIEKIPASLCALEKLTELNMGSNALTSIPDEIGKLKSMETLDLSF 330

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N ++++P  +     L  L +  N L ++PD +G L ++  L LS N++E +P +L    
Sbjct: 331 NKIDKIPDSLCALEKLTELYMNDNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCTLE 390

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP-------------------- 348
            L E +++  AL+++PD  +S L S+N + L  NK    P                    
Sbjct: 391 QLTELDMKYNALTAIPDE-ISKLKSMNILNLDNNKMEKIPDSLCALQQLTELDMNDXXXM 449

Query: 349 -----SGGPTQFTSVYS---INFEHNQIDKIPYGI----------------------FSR 378
                +  P + + + S   +N ++N++ KIP  +                       S+
Sbjct: 450 ASNALTSIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEISK 509

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
            K++  +N+  N +  +P  L     LTELN+ +N ++ + ++I  L ++++L L NN +
Sbjct: 510 LKSMKILNLYFNKIDKIPDSLCALEKLTELNMASNALTSIPDEISKLKSMKILNLDNNKM 569

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           KK+P+S+  L++L  L +  N L S+P+EIG LK ++ L L  N++  +P ++  L  L+
Sbjct: 570 KKIPASLCALQQLTELYMNGNALTSIPDEIGKLKSMETLNLSFNKIEKIPDSLCALEQLT 629

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L++  N L S+P+EIG L+++ TL L+ N  +  IP  L     L  + + +  L+ IP
Sbjct: 630 ELNMRSNALTSVPDEIGKLKSMKTLNLSSNK-IEKIPASLCALDQLTELIMRSNALTAIP 688

Query: 559 SEI 561
            EI
Sbjct: 689 DEI 691



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 152/506 (30%), Positives = 262/506 (51%), Gaps = 48/506 (9%)

Query: 90   NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
            +I  E  + K   ILNLD +K  +  +P S+  L  L ELY+ GN L S+P +IG + ++
Sbjct: 548  SIPDEISKLKSMKILNLDNNK--MKKIPASLCALQQLTELYMNGNALTSIPDEIGKLKSM 605

Query: 150  TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
              L L+ N +  +PDSL  L+QL  L++R N L  +P  + KL S+K L L  N+I+ + 
Sbjct: 606  ETLNLSFNKIEKIPDSLCALEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIP 665

Query: 210  PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
              +  L  L+ L MR N +  +P E+ +LK++  L+L +N +E++P  +     L  LD+
Sbjct: 666  ASLCALDQLTELIMRSNALTAIPDEISKLKSMKILNLDNNKMEKIPDSLCALQQLTELDI 725

Query: 270  QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GL 327
            + N L +IPD +G L ++  L L  N++E +P++L     L + N+E  AL+++PD  G 
Sbjct: 726  RSNALTSIPDEIGKLKSMKILNLDNNKMEKIPDSLCALEKLTDLNMEHNALTAIPDEIGK 785

Query: 328  LSSLTSINNITLSRNKFTAYPS---GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
            L S+T++N   LS NK    P     G  +   ++ +    N++ + P+ +      L +
Sbjct: 786  LKSMTTLN---LSFNKIEKIPDSLCAGIKKLKLIH-LRLNENKLKEFPWQVIEELP-LCE 840

Query: 385  VNMKDNLLTSLPLDLG------------------------------TWVGLTELNLGTNQ 414
            +++  N L ++P  +G                               W       + T+ 
Sbjct: 841  LSLCGNKLQTVPDHIGRLLRYHPCRKCKHVSLMHYRKTCIYFGYSTKWRMRRRRGMTTDL 900

Query: 415  ISKLSEDIQNLVNLEVLVLSNNLLKKLP-SSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
             +K   D    V ++ L LS    K +  S +G+ + L+ L+LE  +L  +P+EIG   +
Sbjct: 901  STK---DTATHVGMK-LDLSYGKHKSIDLSRLGSYKHLRMLNLEHGELTIVPSEIGECHK 956

Query: 474  LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
            LQ+L L  N++  +P ++  L  L+ +++G N L SIP+EI  L+++ TL L+ N  +  
Sbjct: 957  LQKLELSFNKIAKIPDSLCALEKLTEINMGSNALTSIPDEISKLKSMKTLNLSFNK-IAK 1015

Query: 534  IPFELALCSNLQIMSLDNCPLSQIPS 559
            IP  L     L+I++++   L+ IPS
Sbjct: 1016 IPDSLCALEQLRILNMNGNALTAIPS 1041



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 233/435 (53%), Gaps = 31/435 (7%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           +I  E  + K   ILNLD +K  +  +P S+  L  L ELY+ GN L S+P +I  + ++
Sbjct: 456 SIPDEISKLKSMKILNLDNNK--MKKIPASLCALQQLTELYMNGNALTSIPDEISKLKSM 513

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
             L L  N +  +PDSL  L++L  L++  N L  +P  + KL S+KIL L  N++K + 
Sbjct: 514 KILNLYFNKIDKIPDSLCALEKLTELNMASNALTSIPDEISKLKSMKILNLDNNKMKKIP 573

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
             +  L  L+ L M  N +  +P E+G+LK++ TL+L+ N +E++P  +     L  L++
Sbjct: 574 ASLCALQQLTELYMNGNALTSIPDEIGKLKSMETLNLSFNKIEKIPDSLCALEQLTELNM 633

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
           + N L ++PD +G L ++  L LS N++E +P +L     L E  +   AL+++PD +  
Sbjct: 634 RSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALDQLTELIMRSNALTAIPDEI-- 691

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
                                  ++  S+  +N ++N+++KIP  + +  + L++++++ 
Sbjct: 692 -----------------------SKLKSMKILNLDNNKMEKIPDSLCA-LQQLTELDIRS 727

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
           N LTS+P ++G    +  LNL  N++ K+ + +  L  L  L + +N L  +P  IG L+
Sbjct: 728 NALTSIPDEIGKLKSMKILNLDNNKMEKIPDSLCALEKLTDLNMEHNALTAIPDEIGKLK 787

Query: 450 KLKCLDLEENKLESLPNEI-GFLKELQ--RLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            +  L+L  NK+E +P+ +   +K+L+   L L  N+L   P  +     L  LS+  N 
Sbjct: 788 SMTTLNLSFNKIEKIPDSLCAGIKKLKLIHLRLNENKLKEFPWQVIEELPLCELSLCGNK 847

Query: 507 LQSIPEEIGTLENLH 521
           LQ++P+ IG L   H
Sbjct: 848 LQTVPDHIGRLLRYH 862



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 142/531 (26%), Positives = 244/531 (45%), Gaps = 102/531 (19%)

Query: 90   NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
            +I  E  + K    LNL  +K  I  +P S+  L  L EL +  N L S+P +IG + ++
Sbjct: 594  SIPDEIGKLKSMETLNLSFNK--IEKIPDSLCALEQLTELNMRSNALTSVPDEIGKLKSM 651

Query: 150  TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
              L L+ N +  +P SL  L QL  L +R N L  +P  + KL S+KIL L  N+++ + 
Sbjct: 652  KTLNLSSNKIEKIPASLCALDQLTELIMRSNALTAIPDEISKLKSMKILNLDNNKMEKIP 711

Query: 210  PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
              +  L  L+ L +R N +  +P E+G+LK++  L+L +N +E++P  +     L  L++
Sbjct: 712  DSLCALQQLTELDIRSNALTSIPDEIGKLKSMKILNLDNNKMEKIPDSLCALEKLTDLNM 771

Query: 270  QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS------KCVHLN------------ 311
            +HN L  IPD +G L ++T L LS+N++E +P++L       K +HL             
Sbjct: 772  EHNALTAIPDEIGKLKSMTTLNLSFNKIEKIPDSLCAGIKKLKLIHLRLNENKLKEFPWQ 831

Query: 312  --------EFNVEGCALSSLPD-------------------------------------- 325
                    E ++ G  L ++PD                                      
Sbjct: 832  VIEELPLCELSLCGNKLQTVPDHIGRLLRYHPCRKCKHVSLMHYRKTCIYFGYSTKWRMR 891

Query: 326  ---GLLSSLTSINNIT-------LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
               G+ + L++ +  T       LS  K  +        +  +  +N EH ++  +P  I
Sbjct: 892  RRRGMTTDLSTKDTATHVGMKLDLSYGKHKSIDLSRLGSYKHLRMLNLEHGELTIVPSEI 951

Query: 376  FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
                  L K+ +  N +  +P  L     LTE+N+G+N ++ + ++I  L +++ L LS 
Sbjct: 952  -GECHKLQKLELSFNKIAKIPDSLCALEKLTEINMGSNALTSIPDEISKLKSMKTLNLSF 1010

Query: 436  NLLKKLPSSIGNLRKLKCLDLEENKLESLPN-----------------EIGF-----LKE 473
            N + K+P S+  L +L+ L++  N L ++P+                  + F     +K+
Sbjct: 1011 NKIAKIPDSLCALEQLRILNMNGNALTAIPSVKLQHQTLDIDNGASVFSLCFGMSERIKK 1070

Query: 474  LQ--RLILQSNQLVSLP-RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            L+  RL L  N+L   P + I  L +L  LS+  N LQ++P+ IG L   H
Sbjct: 1071 LKLIRLQLNDNKLKEFPWQIIEELHSLYKLSLCGNELQTVPDHIGRLLRYH 1121



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 185/436 (42%), Gaps = 101/436 (23%)

Query: 90   NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
            +I  E  + K   ILNLD +K  +  +P S+  L  L +L +  N L ++P +IG + ++
Sbjct: 732  SIPDEIGKLKSMKILNLDNNK--MEKIPDSLCALEKLTDLNMEHNALTAIPDEIGKLKSM 789

Query: 150  TCLGLAENSLTSLPDSL-ANLQQLRVLDLRHNK----------LNELPMVVYKLTSLKIL 198
            T L L+ N +  +PDSL A +++L+++ LR N+          + ELP+    L   K+ 
Sbjct: 790  TTLNLSFNKIEKIPDSLCAGIKKLKLIHLRLNENKLKEFPWQVIEELPLCELSLCGNKLQ 849

Query: 199  YL--RFNRIKTVHPDIQYLSNLSMLSMRDNKI-----------------RELPPE----- 234
             +     R+   HP  +   ++S++  R   I                  +L  +     
Sbjct: 850  TVPDHIGRLLRYHP-CRKCKHVSLMHYRKTCIYFGYSTKWRMRRRRGMTTDLSTKDTATH 908

Query: 235  -------------------LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
                               LG  K+L  L+L H  L  +P EIG C  L  L+L  N++ 
Sbjct: 909  VGMKLDLSYGKHKSIDLSRLGSYKHLRMLNLEHGELTIVPSEIGECHKLQKLELSFNKIA 968

Query: 276  NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
             IPD L  L  LT + +  N L S+P+ +SK   +   N+    ++ +PD  L +L  + 
Sbjct: 969  KIPDSLCALEKLTEINMGSNALTSIPDEISKLKSMKTLNLSFNKIAKIPDS-LCALEQLR 1027

Query: 336  NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID--------KIPYGIFSRAKNLS--KV 385
             + ++ N  TA P           S+  +H  +D         + +G+  R K L   ++
Sbjct: 1028 ILNMNGNALTAIP-----------SVKLQHQTLDIDNGASVFSLCFGMSERIKKLKLIRL 1076

Query: 386  NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
             + DN L   P     W           QI      I+ L +L  L L  N L+ +P  I
Sbjct: 1077 QLNDNKLKEFP-----W-----------QI------IEELHSLYKLSLCGNELQTVPDHI 1114

Query: 446  GNLRKLKCLDLEENKL 461
            G L +    ++ E++L
Sbjct: 1115 GRLLRYHPCEVCEHRL 1130


>gi|417783613|ref|ZP_12431331.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409953237|gb|EKO07738.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 595

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 170/507 (33%), Positives = 250/507 (49%), Gaps = 54/507 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  + +L +L+EL L  N L +LP +IG + NL  L L +N L + P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L  LDL  N+L  LP  + +L +L+ L L  N++ T   +I  L NL  L + +
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL TLDL  N    LPKEIG    L TL+L  N+L  +P  +G L 
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  NRL   P+ + +  +L         L++LP   +  L ++  + L  N+ T
Sbjct: 233 NLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKE-MGQLQNLQTLNLVNNRLT 291

Query: 346 AYPSGGPTQFTSVYSINF--------EHNQIDKI-------------------------- 371
            +P     Q  ++  +          E  +I K+                          
Sbjct: 292 VFPK-EIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSSLDLREVAENGVYRNLNLAQEE 350

Query: 372 PYGIFS-----------------RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
           P  +F                  + +NL  +N+ D   ++LP ++     L  L LG N 
Sbjct: 351 PLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISLLKNLKYLALGLNG 410

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           + K+  +I  L NLE L L  N L++LP  IG LR L+ L L +N L+  P EI  LK+L
Sbjct: 411 LKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKL 470

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           Q+L L  NQ  + P+ IG L NL  L++  N L ++  EIG L+NL  L LNDN     +
Sbjct: 471 QKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQ-FTVL 529

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEI 561
           P E+     LQ + L N  L+ +P+EI
Sbjct: 530 PKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 151/436 (34%), Positives = 234/436 (53%), Gaps = 32/436 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L L K+ +T  P  + +L +L++L+L  N+L +LP +IG + NL  L L +N  T
Sbjct: 140 QNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFT 199

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ L+ L+L  N+L  LP+ + +L +L+ LYLR NR+     +I  L NL M
Sbjct: 200 TLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQM 259

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN---- 276
           L   +N++  LP E+G+L+NL TL+L +N L   PKEIG    L  L+L  N L      
Sbjct: 260 LCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERK 319

Query: 277 -----IPDMLGNL-----------INLTR--------LRLSYNRL-ESVPETLSKCVHLN 311
                 PD   +L           +NL +        L L Y    +S P+ + K  +L 
Sbjct: 320 RIQKLFPDSSLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLR 379

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
             N+  C  S+LP  + S L ++  + L  N     PS    Q  ++ ++N E N+++++
Sbjct: 380 GLNLYDCGFSTLPKEI-SLLKNLKYLALGLNGLKKIPSE-IGQLRNLEALNLEANELERL 437

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + +NL K+++  N L   P ++     L +L+L  NQ +   ++I  L NL+ L
Sbjct: 438 PKEI-GQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTL 496

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  L + IG L+ L+ LDL +N+   LP EIG LK+LQ L L++NQL +LP  I
Sbjct: 497 NLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556

Query: 492 GHLTNLSYLSVGENNL 507
           G L NL +L +  N L
Sbjct: 557 GQLQNLQWLYLQNNQL 572



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 212/453 (46%), Gaps = 56/453 (12%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L  +L N   +RVL+L   KL  LP  + +L +L+ L L++N + T+  +I  L NL  
Sbjct: 39  DLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQE 98

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +RDN++   P  + EL+ L +LDL+ N L  LP EIG    L  L L  N+L   P  
Sbjct: 99  LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 158

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL +L LS NRL ++P+ + +  +L   +++    ++LP   +  L ++  + LS
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKE-IGQLQNLQTLNLS 217

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P     Q  ++  +   +N++   P  I  + +NL  +   +N LT+LP ++G
Sbjct: 218 DNQLATLPV-EIGQLQNLQELYLRNNRLTVFPKEI-GQLQNLQMLCSPENRLTALPKEMG 275

Query: 401 TWVGLTELNLGTNQISKLSEDI---QNLVNLEVL-------------------------V 432
               L  LNL  N+++   ++I   QNL +LE+L                         V
Sbjct: 276 QLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSSLDLREV 335

Query: 433 LSNNLLKKL------------------------PSSIGNLRKLKCLDLEENKLESLPNEI 468
             N + + L                        P  I   R L+ L+L +    +LP EI
Sbjct: 336 AENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEI 395

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
             LK L+ L L  N L  +P  IG L NL  L++  N L+ +P+EIG L NL  L L+ N
Sbjct: 396 SLLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQKLSLHQN 455

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           T L   P E+     LQ + L     +  P EI
Sbjct: 456 T-LKIFPAEIEQLKKLQKLDLSVNQFTTFPKEI 487



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 106/199 (53%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  N+  L+L     + LP  +  L +L+ L L  N L  +PS+IG + NL  L L  N 
Sbjct: 374 KFRNLRGLNLYDCGFSTLPKEISLLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANE 433

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP  +  L+ L+ L L  N L   P  + +L  L+ L L  N+  T   +I  L NL
Sbjct: 434 LERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENL 493

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L+++ N++  L  E+G+L+NL  LDL  N    LPKEIG    L TLDL++N+L  +P
Sbjct: 494 QTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 279 DMLGNLINLTRLRLSYNRL 297
             +G L NL  L L  N+L
Sbjct: 554 TEIGQLQNLQWLYLQNNQL 572



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 106/215 (49%), Gaps = 4/215 (1%)

Query: 107 DLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSL 166
           D S+S     P  + K  +L  L LY    ++LP +I  + NL  L L  N L  +P  +
Sbjct: 363 DFSQS----FPKVILKFRNLRGLNLYDCGFSTLPKEISLLKNLKYLALGLNGLKKIPSEI 418

Query: 167 ANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDN 226
             L+ L  L+L  N+L  LP  + +L +L+ L L  N +K    +I+ L  L  L +  N
Sbjct: 419 GQLRNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVN 478

Query: 227 KIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           +    P E+G+L+NL TL+L  N L  L  EIG    L  LDL  N+   +P  +G L  
Sbjct: 479 QFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKK 538

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
           L  L L  N+L ++P  + +  +L    ++   LS
Sbjct: 539 LQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS 573


>gi|421119262|ref|ZP_15579586.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347892|gb|EKO98743.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 738

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 162/453 (35%), Positives = 258/453 (56%), Gaps = 18/453 (3%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS  + T LP  +E+L +L+EL L  N+LA+ P+ I  +  L  L L+EN L  
Sbjct: 49  NVRILDLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVM 108

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP+ +  LQ L+ L L  NKL   P  + +L +L+ L L+ N++ T+  +I  L NL  L
Sbjct: 109 LPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLEKL 168

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++R N++  LP E+G+L+NL TL+L  N L  LP EIG    L TL L  N+L   P  +
Sbjct: 169 NLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEI 228

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L L+ N+L+++P+ + +   L + N++G  +++LP G               
Sbjct: 229 GQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKG--------------- 273

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P+    Q  ++  ++  +N++  +P  I  + +NL  +++  N LT+LP ++  
Sbjct: 274 NQLTTLPA-EIGQLKNLQILSLSYNRLATLPREI-GQLQNLKSLDLGGNQLTTLPREINK 331

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L EL L  N+++ + ++I  L NL +L L NN +  LP  I   + L+ L+L  N+L
Sbjct: 332 LKNLKELYLNGNKLTIVPKEIWELENLTILQLKNNRISTLPKEIEKSKNLQELNLRGNRL 391

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            +LP EIG LK L+ L L++N++  LP  IG L NL   ++  N L SIP+EIG L+NL 
Sbjct: 392 VTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLR 451

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
            LYL +N  L  +P ++    +L++++L   PL
Sbjct: 452 MLYL-ENNQLKTLPRQMEKLQDLEVLNLLINPL 483



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 171/539 (31%), Positives = 271/539 (50%), Gaps = 86/539 (15%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS++ +  LP  + +L +L+EL LY NKL + P +IG + NL  L L +N L +LP  
Sbjct: 99  LDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVE 158

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L  L+LR N+L  LP  + +L +L+ L L+ N++ T+  +I  L NL  L + +
Sbjct: 159 IGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSE 218

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL---------QHNELVN 276
           N++   P E+G+L+NL  LDL  N L+ LPKEIG    L  L+L         + N+L  
Sbjct: 219 NQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTT 278

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L NL  L LSYNRL ++P  + +  +L   ++ G  L++LP  + + L ++  
Sbjct: 279 LPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREI-NKLKNLKE 337

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L+ NK T  P     +  ++  +  ++N+I  +P  I  ++KNL ++N++ N L +LP
Sbjct: 338 LYLNGNKLTIVPKE-IWELENLTILQLKNNRISTLPKEI-EKSKNLQELNLRGNRLVTLP 395

Query: 397 LDLGTW-------------------VGLTE----LNLGTNQISKLSEDIQNLVNLEVLVL 433
            ++G                     +G  E     NL  N+++ + ++I NL NL +L L
Sbjct: 396 GEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYL 455

Query: 434 SNNLLKKLPSSIGNLRKLKCLDL--------EENKLESL--------------------- 464
            NN LK LP  +  L+ L+ L+L        E  K+++L                     
Sbjct: 456 ENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGGTYRNLN 515

Query: 465 ----------------------PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
                                 P EI  LK L+ L L    LV+LP+ I  L +L +LS+
Sbjct: 516 LALEQPLKILSLSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSL 575

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           G N L+S+P+EIG L NL +L +  N     +P E+A   NL+ + L+       P EI
Sbjct: 576 GLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI 634



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 168/487 (34%), Positives = 248/487 (50%), Gaps = 60/487 (12%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYL---------YGNKLASLPSQIGYVTNLTC 151
           EN+  LDL+ + +  LP  + +L  LE+L L          GN+L +LP++IG + NL  
Sbjct: 232 ENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQI 291

Query: 152 LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD 211
           L L+ N L +LP  +  LQ L+ LDL  N+L  LP  + KL +LK LYL  N++  V  +
Sbjct: 292 LSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKE 351

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
           I  L NL++L +++N+I  LP E+ + KNL  L+L  N L  LP EIG   +L  L+L++
Sbjct: 352 IWELENLTILQLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLEN 411

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL--LS 329
           N +  +P+ +G L NL    LS N+L S+P+ +    +L    +E   L +LP  +  L 
Sbjct: 412 NRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQ 471

Query: 330 SLTSIN---NITLS--RNKFTA-----------YPSGGP--------TQFTSVYSINFEH 365
            L  +N   N  LS  R K  A              GG          Q   + S++ E+
Sbjct: 472 DLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGGTYRNLNLALEQPLKILSLSLEY 531

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKD-----------------------NLLTSLPLDLGTW 402
            Q    P  I  R KNL  +++ D                       N L SLP ++G  
Sbjct: 532 QQFSLFPKEIL-RLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLL 590

Query: 403 VGLTELNLGTN-QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
             L  L++G N +   L ++I  L NL  L+L+ N  K  P  I  L+KL  L++  N+L
Sbjct: 591 RNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQL 650

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
           ++LP +IG LK LQ L L  N+L +LP  IG L NL+ L +  N ++ +PEEI  L+NL 
Sbjct: 651 DALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKMLPEEIARLQNLR 710

Query: 522 TLYLNDN 528
            L L +N
Sbjct: 711 KLTLYEN 717



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/318 (34%), Positives = 167/318 (52%), Gaps = 13/318 (4%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  LDL       +P  +  L NL  L L  N+L + P  + +   L  
Sbjct: 39  DLTKALQNPLNVRILDLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLES 98

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            ++    L  LP+  +  L ++  + L +NK   +P     Q  ++ ++N + NQ+  +P
Sbjct: 99  LDLSENRLVMLPNE-IGRLQNLQELGLYKNKLITFPK-EIGQLQNLQTLNLQDNQLATLP 156

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  R +NL K+N++ N LT LP ++G    L  LNL  NQ++ L  +I  L NL+ L 
Sbjct: 157 VEI-GRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLG 215

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA-- 490
           LS N L   P  IG L  L+ LDL  N+L++LP EIG L++L++L L  NQ+ +LP+   
Sbjct: 216 LSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQ 275

Query: 491 -------IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
                  IG L NL  LS+  N L ++P EIG L+NL +L L  N  L  +P E+    N
Sbjct: 276 LTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQ-LTTLPREINKLKN 334

Query: 544 LQIMSLDNCPLSQIPSEI 561
           L+ + L+   L+ +P EI
Sbjct: 335 LKELYLNGNKLTIVPKEI 352



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 180/380 (47%), Gaps = 34/380 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIG---------------- 144
           EN+  L L  + I+ LP  +EK  +L+EL L GN+L +LP +IG                
Sbjct: 356 ENLTILQLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIK 415

Query: 145 -------YVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
                   + NL    L+ N L S+P  + NLQ LR+L L +N+L  LP  + KL  L++
Sbjct: 416 ILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 475

Query: 198 LYLRFN-RIKTVHPDIQYLSNLSMLSMRD----NKIRELPPELGELKNLVTLDLAHNHLE 252
           L L  N  +      IQ L     + +RD       R L   L +   +++L L +    
Sbjct: 476 LNLLINPLLSEERKKIQALLPNCNIDLRDVEEGGTYRNLNLALEQPLKILSLSLEYQQFS 535

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
             PKEI     L +L L    LV +P  +  L +L  L L  N+L+S+P+ +    +L  
Sbjct: 536 LFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRS 595

Query: 313 FNVEG-CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
            ++        LP   ++ L ++ ++ L++N+F  +P     +   +  +N   NQ+D +
Sbjct: 596 LDIGANNEFEVLPKE-IARLQNLRSLLLNQNRFKIFPK-EIWELKKLVILNVNTNQLDAL 653

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  R K L  +++  N LT+LP ++G    LTEL L  N+I  L E+I  L NL  L
Sbjct: 654 PEKI-GRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKMLPEEIARLQNLRKL 712

Query: 432 VLSNNLLKKLPSSIGNLRKL 451
            L  N +   P  +  +RKL
Sbjct: 713 TLYENPIP--PQELDKIRKL 730


>gi|417765321|ref|ZP_12413285.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352503|gb|EJP04688.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 595

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 170/507 (33%), Positives = 250/507 (49%), Gaps = 54/507 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  + +L +L+EL L  N L +LP +IG + NL  L L +N L + P  
Sbjct: 53  LNLSGEKLTALPKDIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L  LDL  N+L  LP  + +L +L+ L L  N++ T   +I  L NL  L + +
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL TLDL  N    LPKEIG    L TL+LQ N+L  +P  +G L 
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  NRL   P+ + +  +L         L++LP   +  L ++  + L  N+ T
Sbjct: 233 NLQELYLRNNRLIVFPKEIGQLQNLQMLCSPENRLTALPKE-MGQLQNLQTLNLVNNRLT 291

Query: 346 AYPSGGPTQFTSVYSINF--------EHNQIDKI-------------------------- 371
            +P     Q  ++  +          E  +I K+                          
Sbjct: 292 VFPK-EIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEE 350

Query: 372 PYGIFS-----------------RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
           P  +F                  + +NL  +N+ D   ++LP ++     L  L LG N 
Sbjct: 351 PLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNG 410

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +  +  +I  L NLE L L  N L++LP  IG LR L+ L L +N L+  P EI  LK+L
Sbjct: 411 LKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKL 470

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           Q+L L  NQ  + P+ IG L NL  L++  N L ++P EI  L+NL  L LNDN     +
Sbjct: 471 QKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQ-FTVL 529

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEI 561
           P E+     LQ + L N  L+ +P+EI
Sbjct: 530 PKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 162/459 (35%), Positives = 245/459 (53%), Gaps = 16/459 (3%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS++ +  LP  + +L +L++L LY NKL + P +IG + NL  L L+EN LT+LP  
Sbjct: 122 LDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE 181

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ LDL+ N+   LP  + +L +L+ L L+ N++ T+  +I  L NL  L +R+
Sbjct: 182 IGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN 241

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++   P E+G+L+NL  L    N L  LPKE+G    L TL+L +N L   P  +G L 
Sbjct: 242 NRLIVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQ 301

Query: 286 NLTRLRLSYNRLESVPE--TLSKCVHLNEFNVEGCALSSLPDGLLSSLT-------SINN 336
           NL  L L  N L S+ E   + K    +  ++   A     +G+  +L         +  
Sbjct: 302 NLQDLELLMNPL-SLKERKRIQKLFPDSNLDLREVA----ENGVYRNLNLAQEEPLKVFE 356

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           ++L    F+        +F ++  +N        +P  I SR KNL  + +  N L ++P
Sbjct: 357 LSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKNIP 415

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  LNL  N++ +L ++I  L NL+ L L  N LK  P+ I  L+KL+ LDL
Sbjct: 416 SEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDL 475

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+  + P EIG L+ LQ L LQ NQL +LP  I  L NL  L + +N    +P+EIG 
Sbjct: 476 SVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGK 535

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           L+ L TL L +N  L  +P E+    NLQ + L N   S
Sbjct: 536 LKKLQTLDLRNNQ-LTTLPTEIGQLQNLQWLYLQNNQFS 573



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 151/442 (34%), Positives = 241/442 (54%), Gaps = 33/442 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L L K+ +T  P  + +L +L++L+L  N+L +LP +IG + NL  L L +N  T
Sbjct: 140 QNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFT 199

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ L+ L+L+ N+L  LP+ + +L +L+ LYLR NR+     +I  L NL M
Sbjct: 200 TLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLIVFPKEIGQLQNLQM 259

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL------ 274
           L   +N++  LP E+G+L+NL TL+L +N L   PKEIG    L  L+L  N L      
Sbjct: 260 LCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERK 319

Query: 275 ----------VNIPDMLGNLI----NLTR--------LRLSYNRL-ESVPETLSKCVHLN 311
                     +++ ++  N +    NL +        L L Y    +S P+ + K  +L 
Sbjct: 320 RIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLR 379

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
             N+  C  S+LP  + S L ++  + L  N     PS    Q  ++ ++N E N+++++
Sbjct: 380 GLNLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKNIPSE-IGQLKNLEALNLEANELERL 437

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + +NL K+++  N L   P ++     L +L+L  NQ +   ++I  L NL+ L
Sbjct: 438 PKEI-GQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTL 496

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  LP+ I  L+ L+ LDL +N+   LP EIG LK+LQ L L++NQL +LP  I
Sbjct: 497 NLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556

Query: 492 GHLTNLSYLSVGENNLQSIPEE 513
           G L NL +L + +NN  S  E+
Sbjct: 557 GQLQNLQWLYL-QNNQFSFEEQ 577



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 137/430 (31%), Positives = 216/430 (50%), Gaps = 33/430 (7%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L  +L N   +RVL+L   KL  LP  + +L +L+ L L++N + T+  +I  L NL  
Sbjct: 39  DLTKALQNPLDVRVLNLSGEKLTALPKDIGQLKNLQELNLKWNLLTTLPKEIGQLENLQE 98

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +RDN++   P  + EL+ L +LDL+ N L  LP EIG    L  L L  N+L   P  
Sbjct: 99  LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 158

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL +L LS NRL ++P+ + +  +L   +++    ++LP   +  L ++  + L 
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKE-IGQLQNLQTLNLQ 217

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P     Q  ++  +   +N++   P  I  + +NL  +   +N LT+LP ++G
Sbjct: 218 DNQLATLPV-EIGQLQNLQELYLRNNRLIVFPKEI-GQLQNLQMLCSPENRLTALPKEMG 275

Query: 401 TWVGLTELNLGTNQISKLSEDI---QNLVNLEVLV--LS----NNLLKKLPSSIGNLRK- 450
               L  LNL  N+++   ++I   QNL +LE+L+  LS      + K  P S  +LR+ 
Sbjct: 276 QLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREV 335

Query: 451 ----------------LKCLDLE---ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
                           LK  +L    ++  +S P  I   + L+ L L      +LP+ I
Sbjct: 336 AENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEI 395

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
             L NL YL++G N L++IP EIG L+NL  L L  N  L  +P E+    NLQ +SL  
Sbjct: 396 SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE-LERLPKEIGQLRNLQKLSLHQ 454

Query: 552 CPLSQIPSEI 561
             L   P+EI
Sbjct: 455 NTLKIFPAEI 464



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 107/199 (53%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  N+  L+L     + LP  + +L +L+ L L  N L ++PS+IG + NL  L L  N 
Sbjct: 374 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 433

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP  +  L+ L+ L L  N L   P  + +L  L+ L L  N+  T   +I  L NL
Sbjct: 434 LERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENL 493

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L+++ N++  LP E+ +LKNL  LDL  N    LPKEIG    L TLDL++N+L  +P
Sbjct: 494 QTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 279 DMLGNLINLTRLRLSYNRL 297
             +G L NL  L L  N+ 
Sbjct: 554 TEIGQLQNLQWLYLQNNQF 572



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N   ++ L+L   KL +LP +IG LK LQ L L+ N L +LP+ IG L NL 
Sbjct: 38  RDLTKALQNPLDVRVLNLSGEKLTALPKDIGQLKNLQELNLKWNLLTTLPKEIGQLENLQ 97

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L + +N L + P  I  L+ L +L L++N  +  +P E+    NLQ + L    L+  P
Sbjct: 98  ELDLRDNQLATFPAVIVELQKLESLDLSENRLI-ILPNEIGRLQNLQDLGLYKNKLTTFP 156

Query: 559 SEI 561
            EI
Sbjct: 157 KEI 159


>gi|456969346|gb|EMG10380.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 598

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 170/511 (33%), Positives = 252/511 (49%), Gaps = 54/511 (10%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L+LS   +T LP  + +L +L+EL L  N L +LP +IG + NL  L L +N L +
Sbjct: 49  NVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLAT 108

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
            P  +  LQ+L  LDL  N+L  LP  + +L +L+ L L  N++ T   +I  L NL  L
Sbjct: 109 FPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKL 168

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + +N++  LP E+G+LKNL TLDL  N    LPKEIG    L TL+L  N+L  +P  +
Sbjct: 169 WLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEI 228

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL +L L  NRL   P+ + +  +L         L++LP   +  L ++  + L  
Sbjct: 229 GQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKE-MGQLQNLQTLNLVN 287

Query: 342 NKFTAYPSGGPTQFTSVYSINF--------EHNQIDKI---------------------- 371
           N+ T +P     Q  ++  +          E  +I K+                      
Sbjct: 288 NRLTVFPK-EIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNL 346

Query: 372 ----PYGIFS-----------------RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
               P  +F                  + +NL  +N+ D   ++LP ++     L  L L
Sbjct: 347 AQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLAL 406

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
           G N +  +  +I  L NLE L L  N L++LP  IG LR L+ L L +N L+  P EI  
Sbjct: 407 GLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQ 466

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           LK+LQ+L L  NQ  + P+ IG L NL  L++  N L ++  EIG L+NL  L LNDN  
Sbjct: 467 LKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQ- 525

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
              +P E+     LQ + L N  L+ +P+EI
Sbjct: 526 FTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 163/459 (35%), Positives = 245/459 (53%), Gaps = 16/459 (3%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS++ +  LP  + +L +L++L LY NKL + P +IG + NL  L L+EN LT+LP  
Sbjct: 122 LDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE 181

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ LDL+ N+   LP  + +L +L+ L L  N++ T+  +I  L NL  L +R+
Sbjct: 182 IGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQKLYLRN 241

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++   P E+G+L+NL  L    N L  LPKE+G    L TL+L +N L   P  +G L 
Sbjct: 242 NRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQ 301

Query: 286 NLTRLRLSYNRLESVPE--TLSKCVHLNEFNVEGCALSSLPDGLLSSLT-------SINN 336
           NL  L L  N L S+ E   + K    +  ++   A     +G+  +L         +  
Sbjct: 302 NLQDLELLMNPL-SLKERKRIQKLFPDSNLDLREVA----ENGVYRNLNLAQEEPLKVFE 356

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           ++L    F+        +F ++  +N        +P  I SR KNL  + +  N L ++P
Sbjct: 357 LSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKNIP 415

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  LNL  N++ +L ++I  L NL+ L L  N LK  P+ I  L+KL+ LDL
Sbjct: 416 SEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDL 475

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+  + P EIG L+ LQ L LQ NQL +L   IG L NL  L + +N    +P+EIG 
Sbjct: 476 SVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGK 535

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           L+ L TL L +N  L  +P E+    NLQ + L N  LS
Sbjct: 536 LKKLQTLDLRNNQ-LTTLPTEIGQLQNLQWLYLQNNQLS 573



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 149/436 (34%), Positives = 235/436 (53%), Gaps = 32/436 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L L K+ +T  P  + +L +L++L+L  N+L +LP +IG + NL  L L +N  T
Sbjct: 140 QNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFT 199

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L+L  N+L  LP+ + +L +L+ LYLR NR+     +I  L NL M
Sbjct: 200 ILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQM 259

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL------ 274
           L   +N++  LP E+G+L+NL TL+L +N L   PKEIG    L  L+L  N L      
Sbjct: 260 LCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERK 319

Query: 275 ----------VNIPDMLGNLI----NLTR--------LRLSYNRL-ESVPETLSKCVHLN 311
                     +++ ++  N +    NL +        L L Y    +S P+ + K  +L 
Sbjct: 320 RIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLR 379

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
             N+  C  S+LP  + S L ++  + L  N     PS    Q  ++ ++N E N+++++
Sbjct: 380 GLNLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKNIPSE-IGQLKNLEALNLEANELERL 437

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + +NL K+++  N L   P ++     L +L+L  NQ +   ++I  L NL+ L
Sbjct: 438 PKEI-GQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTL 496

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  L + IG L+ L+ LDL +N+   LP EIG LK+LQ L L++NQL +LP  I
Sbjct: 497 NLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556

Query: 492 GHLTNLSYLSVGENNL 507
           G L NL +L +  N L
Sbjct: 557 GQLQNLQWLYLQNNQL 572



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 158/281 (56%), Gaps = 4/281 (1%)

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           +++   L N +N+  L LS  +L ++P+ + +  +L E N++   L++LP   +  L ++
Sbjct: 38  MDLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKE-IGQLENL 96

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + L  N+   +P+    +   + S++   N++  +P  I  R +NL  + +  N LT+
Sbjct: 97  QELDLRDNQLATFPA-VIVELQKLESLDLSENRLIILPNEI-GRLQNLQDLGLYKNKLTT 154

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
            P ++G    L +L L  N+++ L ++I  L NL+ L L +N    LP  IG L+ L+ L
Sbjct: 155 FPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTL 214

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           +L +N+L +LP EIG L+ LQ+L L++N+L   P+ IG L NL  L   EN L ++P+E+
Sbjct: 215 NLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEM 274

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           G L+NL TL L +N  L   P E+    NLQ + L   PLS
Sbjct: 275 GQLQNLQTLNLVNNR-LTVFPKEIGQLQNLQDLELLMNPLS 314



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 108/199 (54%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  N+  L+L     + LP  + +L +L+ L L  N L ++PS+IG + NL  L L  N 
Sbjct: 374 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 433

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP  +  L+ L+ L L  N L   P  + +L  L+ L L  N+  T   +I  L NL
Sbjct: 434 LERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENL 493

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L+++ N++  L  E+G+L+NL  LDL  N    LPKEIG    L TLDL++N+L  +P
Sbjct: 494 QTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 279 DMLGNLINLTRLRLSYNRL 297
             +G L NL  L L  N+L
Sbjct: 554 TEIGQLQNLQWLYLQNNQL 572



 Score = 39.3 bits (90), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
           + L +A+ +  N+  L++    L ++P+EIG L+NL  L L  N  L  +P E+    NL
Sbjct: 38  MDLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWN-LLTTLPKEIGQLENL 96

Query: 545 QIMSLDNCPLSQIPSEIV 562
           Q + L +  L+  P+ IV
Sbjct: 97  QELDLRDNQLATFPAVIV 114


>gi|456825279|gb|EMF73675.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 595

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 170/507 (33%), Positives = 249/507 (49%), Gaps = 54/507 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  + +L +L+EL L  N L  LP +IG + NL  L L +N L + P  
Sbjct: 53  LNLSGEKLTVLPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L  LDL  N+L  LP  + +L +L+ L L  N++ T   +I  L NL  L + +
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL TLDL  N    LPKEIG    L TL+LQ N+L  +P  +G L 
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  NRL   P+ + +  +L         L++LP   +  L ++  + L  N+ T
Sbjct: 233 NLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKE-MGQLQNLQTLNLVNNRLT 291

Query: 346 AYPSGGPTQFTSVYSINF--------EHNQIDKI-------------------------- 371
            +P     Q  ++  +          E  +I K+                          
Sbjct: 292 VFPK-EIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEE 350

Query: 372 PYGIFS-----------------RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
           P  +F                  + +NL  +N+ D   ++LP ++     L  L LG N 
Sbjct: 351 PLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNG 410

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +  +  +I  L NLE L L  N L++LP  IG LR L+ L L +N L+  P EI  LK+L
Sbjct: 411 LKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKL 470

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           Q+L L  NQ  + P+ IG L NL  L++  N L ++P EI  L+NL  L LNDN     +
Sbjct: 471 QKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQ-FTVL 529

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEI 561
           P E+     LQ + L N  L+ +P+EI
Sbjct: 530 PKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 162/459 (35%), Positives = 245/459 (53%), Gaps = 16/459 (3%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS++ +  LP  + +L +L++L LY NKL + P +IG + NL  L L+EN LT+LP  
Sbjct: 122 LDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE 181

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ LDL+ N+   LP  + +L +L+ L L+ N++ T+  +I  L NL  L +R+
Sbjct: 182 IGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN 241

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++   P E+G+L+NL  L    N L  LPKE+G    L TL+L +N L   P  +G L 
Sbjct: 242 NRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQ 301

Query: 286 NLTRLRLSYNRLESVPE--TLSKCVHLNEFNVEGCALSSLPDGLLSSLT-------SINN 336
           NL  L L  N L S+ E   + K    +  ++   A     +G+  +L         +  
Sbjct: 302 NLQDLELLMNPL-SLKERKRIQKLFPDSNLDLREVA----ENGVYRNLNLAQEEPLKVFE 356

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           ++L    F+        +F ++  +N        +P  I SR KNL  + +  N L ++P
Sbjct: 357 LSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKNIP 415

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  LNL  N++ +L ++I  L NL+ L L  N LK  P+ I  L+KL+ LDL
Sbjct: 416 SEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDL 475

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+  + P EIG L+ LQ L LQ NQL +LP  I  L NL  L + +N    +P+EIG 
Sbjct: 476 SVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGK 535

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           L+ L TL L +N  L  +P E+    NLQ + L N   S
Sbjct: 536 LKKLQTLDLRNNQ-LTTLPTEIGQLQNLQWLYLQNNQFS 573



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 151/442 (34%), Positives = 241/442 (54%), Gaps = 33/442 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L L K+ +T  P  + +L +L++L+L  N+L +LP +IG + NL  L L +N  T
Sbjct: 140 QNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFT 199

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ L+ L+L+ N+L  LP+ + +L +L+ LYLR NR+     +I  L NL M
Sbjct: 200 TLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQM 259

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL------ 274
           L   +N++  LP E+G+L+NL TL+L +N L   PKEIG    L  L+L  N L      
Sbjct: 260 LCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERK 319

Query: 275 ----------VNIPDMLGNLI----NLTR--------LRLSYNRL-ESVPETLSKCVHLN 311
                     +++ ++  N +    NL +        L L Y    +S P+ + K  +L 
Sbjct: 320 RIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLR 379

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
             N+  C  S+LP  + S L ++  + L  N     PS    Q  ++ ++N E N+++++
Sbjct: 380 GLNLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKNIPSE-IGQLKNLEALNLEANELERL 437

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + +NL K+++  N L   P ++     L +L+L  NQ +   ++I  L NL+ L
Sbjct: 438 PKEI-GQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTL 496

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  LP+ I  L+ L+ LDL +N+   LP EIG LK+LQ L L++NQL +LP  I
Sbjct: 497 NLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556

Query: 492 GHLTNLSYLSVGENNLQSIPEE 513
           G L NL +L + +NN  S  E+
Sbjct: 557 GQLQNLQWLYL-QNNQFSFEEQ 577



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 136/430 (31%), Positives = 215/430 (50%), Gaps = 33/430 (7%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L  +L N   +RVL+L   KL  LP  + +L +L+ L L++N +  +  +I  L NL  
Sbjct: 39  DLTKALQNPLDVRVLNLSGEKLTVLPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQE 98

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +RDN++   P  + EL+ L +LDL+ N L  LP EIG    L  L L  N+L   P  
Sbjct: 99  LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 158

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL +L LS NRL ++P+ + +  +L   +++    ++LP   +  L ++  + L 
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKE-IGQLQNLQTLNLQ 217

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P     Q  ++  +   +N++   P  I  + +NL  +   +N LT+LP ++G
Sbjct: 218 DNQLATLPV-EIGQLQNLQELYLRNNRLTVFPKEI-GQLQNLQMLCSPENRLTALPKEMG 275

Query: 401 TWVGLTELNLGTNQISKLSEDI---QNLVNLEVLV--LS----NNLLKKLPSSIGNLRK- 450
               L  LNL  N+++   ++I   QNL +LE+L+  LS      + K  P S  +LR+ 
Sbjct: 276 QLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREV 335

Query: 451 ----------------LKCLDLE---ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
                           LK  +L    ++  +S P  I   + L+ L L      +LP+ I
Sbjct: 336 AENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEI 395

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
             L NL YL++G N L++IP EIG L+NL  L L  N  L  +P E+    NLQ +SL  
Sbjct: 396 SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE-LERLPKEIGQLRNLQKLSLHQ 454

Query: 552 CPLSQIPSEI 561
             L   P+EI
Sbjct: 455 NTLKIFPAEI 464



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 107/199 (53%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  N+  L+L     + LP  + +L +L+ L L  N L ++PS+IG + NL  L L  N 
Sbjct: 374 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 433

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP  +  L+ L+ L L  N L   P  + +L  L+ L L  N+  T   +I  L NL
Sbjct: 434 LERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENL 493

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L+++ N++  LP E+ +LKNL  LDL  N    LPKEIG    L TLDL++N+L  +P
Sbjct: 494 QTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 279 DMLGNLINLTRLRLSYNRL 297
             +G L NL  L L  N+ 
Sbjct: 554 TEIGQLQNLQWLYLQNNQF 572


>gi|418708997|ref|ZP_13269797.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770927|gb|EKR46140.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 595

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 170/511 (33%), Positives = 252/511 (49%), Gaps = 54/511 (10%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L+LS   +T LP  + +L +L+EL L  N L +LP +IG + NL  L L +N L +
Sbjct: 49  NVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLAT 108

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
            P  +  LQ+L  LDL  N+L  LP  + +L +L+ L L  N++ T   +I  L NL  L
Sbjct: 109 FPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKL 168

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + +N++  LP E+G+LKNL TLDL  N    LPKEIG    L TL+L  N+L  +P  +
Sbjct: 169 WLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEI 228

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL +L L  NRL   P+ + +  +L         L++LP   +  L ++  + L  
Sbjct: 229 GQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKE-MGQLQNLQTLNLVN 287

Query: 342 NKFTAYPSGGPTQFTSVYSINF--------EHNQIDKI---------------------- 371
           N+ T +P     Q  ++  +          E  +I K+                      
Sbjct: 288 NRLTVFPK-EIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNL 346

Query: 372 ----PYGIFS-----------------RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
               P  +F                  + +NL  +N+ D   ++LP ++     L  L L
Sbjct: 347 AQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLAL 406

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
           G N +  +  +I  L NLE L L  N L++LP  IG LR L+ L L +N L+  P EI  
Sbjct: 407 GLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQ 466

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           LK+LQ+L L  NQ  + P+ IG L NL  L++  N L ++  EIG L+NL  L LNDN  
Sbjct: 467 LKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQ- 525

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
              +P E+     LQ + L N  L+ +P+EI
Sbjct: 526 FTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 163/459 (35%), Positives = 245/459 (53%), Gaps = 16/459 (3%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS++ +  LP  + +L +L++L LY NKL + P +IG + NL  L L+EN LT+LP  
Sbjct: 122 LDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE 181

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ LDL+ N+   LP  + +L +L+ L L  N++ T+  +I  L NL  L +R+
Sbjct: 182 IGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQKLYLRN 241

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++   P E+G+L+NL  L    N L  LPKE+G    L TL+L +N L   P  +G L 
Sbjct: 242 NRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQ 301

Query: 286 NLTRLRLSYNRLESVPE--TLSKCVHLNEFNVEGCALSSLPDGLLSSLT-------SINN 336
           NL  L L  N L S+ E   + K    +  ++   A     +G+  +L         +  
Sbjct: 302 NLQDLELLMNPL-SLKERKRIQKLFPDSNLDLREVA----ENGVYRNLNLAQEEPLKVFE 356

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           ++L    F+        +F ++  +N        +P  I SR KNL  + +  N L ++P
Sbjct: 357 LSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKNIP 415

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  LNL  N++ +L ++I  L NL+ L L  N LK  P+ I  L+KL+ LDL
Sbjct: 416 SEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDL 475

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+  + P EIG L+ LQ L LQ NQL +L   IG L NL  L + +N    +P+EIG 
Sbjct: 476 SVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGK 535

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           L+ L TL L +N  L  +P E+    NLQ + L N  LS
Sbjct: 536 LKKLQTLDLRNNQ-LTTLPTEIGQLQNLQWLYLQNNQLS 573



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 149/436 (34%), Positives = 235/436 (53%), Gaps = 32/436 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L L K+ +T  P  + +L +L++L+L  N+L +LP +IG + NL  L L +N  T
Sbjct: 140 QNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFT 199

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L+L  N+L  LP+ + +L +L+ LYLR NR+     +I  L NL M
Sbjct: 200 ILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQM 259

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL------ 274
           L   +N++  LP E+G+L+NL TL+L +N L   PKEIG    L  L+L  N L      
Sbjct: 260 LCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERK 319

Query: 275 ----------VNIPDMLGNLI----NLTR--------LRLSYNRL-ESVPETLSKCVHLN 311
                     +++ ++  N +    NL +        L L Y    +S P+ + K  +L 
Sbjct: 320 RIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLR 379

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
             N+  C  S+LP  + S L ++  + L  N     PS    Q  ++ ++N E N+++++
Sbjct: 380 GLNLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKNIPSE-IGQLKNLEALNLEANELERL 437

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + +NL K+++  N L   P ++     L +L+L  NQ +   ++I  L NL+ L
Sbjct: 438 PKEI-GQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTL 496

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  L + IG L+ L+ LDL +N+   LP EIG LK+LQ L L++NQL +LP  I
Sbjct: 497 NLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556

Query: 492 GHLTNLSYLSVGENNL 507
           G L NL +L +  N L
Sbjct: 557 GQLQNLQWLYLQNNQL 572



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 158/281 (56%), Gaps = 4/281 (1%)

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           +++   L N +N+  L LS  +L ++P+ + +  +L E N++   L++LP   +  L ++
Sbjct: 38  MDLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKE-IGQLENL 96

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + L  N+   +P+    +   + S++   N++  +P  I  R +NL  + +  N LT+
Sbjct: 97  QELDLRDNQLATFPA-VIVELQKLESLDLSENRLIILPNEI-GRLQNLQDLGLYKNKLTT 154

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
            P ++G    L +L L  N+++ L ++I  L NL+ L L +N    LP  IG L+ L+ L
Sbjct: 155 FPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTL 214

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           +L +N+L +LP EIG L+ LQ+L L++N+L   P+ IG L NL  L   EN L ++P+E+
Sbjct: 215 NLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEM 274

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           G L+NL TL L +N  L   P E+    NLQ + L   PLS
Sbjct: 275 GQLQNLQTLNLVNNR-LTVFPKEIGQLQNLQDLELLMNPLS 314



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 108/199 (54%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  N+  L+L     + LP  + +L +L+ L L  N L ++PS+IG + NL  L L  N 
Sbjct: 374 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 433

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP  +  L+ L+ L L  N L   P  + +L  L+ L L  N+  T   +I  L NL
Sbjct: 434 LERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENL 493

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L+++ N++  L  E+G+L+NL  LDL  N    LPKEIG    L TLDL++N+L  +P
Sbjct: 494 QTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 279 DMLGNLINLTRLRLSYNRL 297
             +G L NL  L L  N+L
Sbjct: 554 TEIGQLQNLQWLYLQNNQL 572



 Score = 39.3 bits (90), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
           + L +A+ +  N+  L++    L ++P+EIG L+NL  L L  N  L  +P E+    NL
Sbjct: 38  MDLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWN-LLTTLPKEIGQLENL 96

Query: 545 QIMSLDNCPLSQIPSEIV 562
           Q + L +  L+  P+ IV
Sbjct: 97  QELDLRDNQLATFPAVIV 114


>gi|45657380|ref|YP_001466.1| hypothetical protein LIC11505 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421087857|ref|ZP_15548692.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102412|ref|ZP_15563016.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45600619|gb|AAS70103.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367526|gb|EKP22910.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410429598|gb|EKP73974.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 572

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 166/459 (36%), Positives = 249/459 (54%), Gaps = 16/459 (3%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS++ +  LP  + +L +L+EL LY NKL + P +IG + NL  L L+EN LT+LP  
Sbjct: 99  LDLSENRLVMLPNEIGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE 158

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ LDL++N+   LP  + +L +L+ L L+ N++ T+  +I  L NL  L +R+
Sbjct: 159 IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN 218

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L+NL TL    N L  LPKE+G    L TL+L +N L  +P  +G L 
Sbjct: 219 NRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQ 278

Query: 286 NLTRLRLSYNRLESVPE--TLSKCVHLNEFNVEGCALSSLPDGLLSSLT-------SINN 336
           NL  L L  N L S+ E   + K    +  ++   A     DG+  +L         + +
Sbjct: 279 NLQDLELLMNPL-SLKERKRIQKLFPDSNLDLREVA----EDGVYRNLNLAQEEPLKVFD 333

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L    F+        +F ++  +         +P  I SR KNL  + +  N L ++P
Sbjct: 334 LRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKNIP 392

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  LNL  N++ +L ++I  L NL+ L L  N LK  P+ I  L+KL+ LDL
Sbjct: 393 SEIGQLKNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDL 452

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+  + P EIG L+ LQ L LQ NQL +L   IG L NL  L + +N    +P+EIG 
Sbjct: 453 SVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGK 512

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           L+ L TL L +N  L  +P E+    NLQ + L N  LS
Sbjct: 513 LKKLQTLDLRNNQ-LTTLPTEIGQLQNLQWLYLQNNQLS 550



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 164/486 (33%), Positives = 251/486 (51%), Gaps = 27/486 (5%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS  + T LP  +E+L +L+EL L  N+LA+ P+ I  +  L  L L+EN L  
Sbjct: 49  NVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVM 108

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP+ +  LQ L+ L L  NKL   P  + +L +L+ L+L  NR+  +  +I  L NL  L
Sbjct: 109 LPNEIGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTL 168

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +++N+   LP E+G+L+NL TL+L  N L  LP EIG    L  L L++N L  +P  +
Sbjct: 169 DLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEI 228

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSI----N 335
           G L NL  L    NRL ++P+ + +  +L   N+    L+ LP   G L +L  +    N
Sbjct: 229 GQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMN 288

Query: 336 NITLSRNKFTA--YPSG------------------GPTQFTSVYSINFEHNQIDKIPYGI 375
            ++L   K     +P                       +   V+ +  ++    ++   +
Sbjct: 289 PLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKV 348

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             + +NL ++ + D   ++LP ++     L  L LG N +  +  +I  L NLE L L  
Sbjct: 349 ILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEA 408

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N L++LP  IG LR L+ L L +N L+  P EI  LK+LQ+L L  NQ  + P+ IG L 
Sbjct: 409 NELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE 468

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           NL  L++  N L ++  EIG L+NL  L LNDN     +P E+     LQ + L N  L+
Sbjct: 469 NLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQ-FTVLPKEIGKLKKLQTLDLRNNQLT 527

Query: 556 QIPSEI 561
            +P+EI
Sbjct: 528 TLPTEI 533



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 132/273 (48%), Gaps = 26/273 (9%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  LDL       +P  +  L NL  L L  N+L + P  + +   L  
Sbjct: 39  DLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLES 98

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            ++    L  LP+  +  L ++  + L +NK T +P                        
Sbjct: 99  LDLSENRLVMLPNE-IGRLQNLQELGLYKNKLTTFPKE---------------------- 135

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
                + +NL K+ + +N LT+LP ++G    L  L+L  NQ + L ++I  L NL+ L 
Sbjct: 136 ---IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLN 192

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L +N L  LP  IG L+ L+ L L  N+L  LP EIG L+ LQ L    N+L +LP+ +G
Sbjct: 193 LQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMG 252

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            L NL  L++  N L  +P+EIG L+NL  L L
Sbjct: 253 QLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLEL 285



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 107/199 (53%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  N+  L L     + LP  + +L +L+ L L  N L ++PS+IG + NL  L L  N 
Sbjct: 351 KFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 410

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP  +  L+ L+ L L  N L   P  + +L  L+ L L  N+  T   +I  L NL
Sbjct: 411 LERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENL 470

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L+++ N++  L  E+G+L+NL  LDL  N    LPKEIG    L TLDL++N+L  +P
Sbjct: 471 QTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 530

Query: 279 DMLGNLINLTRLRLSYNRL 297
             +G L NL  L L  N+L
Sbjct: 531 TEIGQLQNLQWLYLQNNQL 549


>gi|418717432|ref|ZP_13277094.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787029|gb|EKR80764.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 595

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 170/507 (33%), Positives = 252/507 (49%), Gaps = 54/507 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  + +L +L+EL L  N L +LP +IG + NL  L L +N L + P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L  LDL  N+L  LP  + +L +L+ L L  N++ T   +I  L NL  L + +
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL TLDL +N    LPKEIG    L TL+LQ N+L  +P  +G L 
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  NRL  +P+ + +  +L         L++LP   +  L ++  + L  N+ T
Sbjct: 233 NLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKE-MGQLKNLQTLNLVNNRLT 291

Query: 346 AYPSGGPTQFTSVYSINF--------EHNQIDKI-------------------------- 371
             P     Q  ++  +          E  +I K+                          
Sbjct: 292 VLPK-EIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEE 350

Query: 372 PYGIFS-----------------RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
           P  +F                  + +NL ++ + D   ++LP ++     L  L LG N 
Sbjct: 351 PLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNG 410

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           + K+  +I  L NLE L L  N L++LP  IG LR L+ L L +N L+  P EI  LK+L
Sbjct: 411 LKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKL 470

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           Q+L L  NQ  + P+ IG L NL  L++  N L ++P EI  L+NL  L LNDN     +
Sbjct: 471 QKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQ-FTVL 529

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEI 561
           P E+     LQ + L N  L+ +P+EI
Sbjct: 530 PKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 153/442 (34%), Positives = 238/442 (53%), Gaps = 33/442 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L L K+ +T  P  + +L +L++L+L  N+L +LP +IG + NL  L L  N  T
Sbjct: 140 QNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFT 199

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L+L+ N+L  LP+ + +L +L+ LYLR NR+  +  +I  L NL  
Sbjct: 200 ILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQT 259

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN---- 276
           L   +N++  LP E+G+LKNL TL+L +N L  LPKEIG    L  L+L  N L      
Sbjct: 260 LCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERK 319

Query: 277 -----IPDMLGNL-----------INLTR--------LRLSYNRLESV-PETLSKCVHLN 311
                 PD   +L           +NL +        LRL Y     + P+ + K  +L 
Sbjct: 320 RIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLR 379

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
           E  +  C  S+LP  + S L ++  + L  N     PS    Q  ++ ++N E N+++++
Sbjct: 380 ELYLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKKIPSE-IGQLRNLEALNLEANELERL 437

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + +NL ++++  N L   P ++     L +L+L  NQ +   ++I  L NL+ L
Sbjct: 438 PKEI-GQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTL 496

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  LP+ I  L+ L+ LDL +N+   LP EIG LK+LQ L L++NQL +LP  I
Sbjct: 497 NLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556

Query: 492 GHLTNLSYLSVGENNLQSIPEE 513
           G L NL +L + +NN  S  E+
Sbjct: 557 GQLQNLQWLYL-QNNQFSFEEQ 577



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 204/450 (45%), Gaps = 83/450 (18%)

Query: 145 YVTNLTCLGLAE----NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           ++  L+C   AE     +   L  +L N   +RVL+L   KL  LP  + +L +L+ L L
Sbjct: 19  FLIYLSCEIQAEEVEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNL 78

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
           ++N + T+  +I  L NL  L +RDN++   P  + EL+ L +LDL+ N L  LP EIG 
Sbjct: 79  KWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGR 138

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  L L  N+L   P  +G L NL +L LS NRL ++P+ + +              
Sbjct: 139 LQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQ-------------- 184

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
                     L ++  + L  N+FT  P                             + +
Sbjct: 185 ----------LKNLQTLDLQNNQFTILPKE-------------------------IGQLQ 209

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           NL  +N++DN L +LP+++G    L EL L  N+++ L ++I  L NL+ L    N L  
Sbjct: 210 NLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTA 269

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA-IGHL---TN 496
           LP  +G L+ L+ L+L  N+L  LP EIG L+ LQ L L  N L    R  I  L   +N
Sbjct: 270 LPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 329

Query: 497 LSYLSVGENNL-------------------------QSIPEEIGTLENLHTLYLNDNTCL 531
           L    V E+ +                         Q  P+ I    NL  LYL D    
Sbjct: 330 LDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYD-CGF 388

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           + +P E++   NL+ ++L    L +IPSEI
Sbjct: 389 STLPKEISRLKNLKYLALGLNGLKKIPSEI 418



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 105/199 (52%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  N+  L L     + LP  + +L +L+ L L  N L  +PS+IG + NL  L L  N 
Sbjct: 374 KFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANE 433

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP  +  L+ L+ L L  N L   P  + +L  L+ L L  N+  T   +I  L NL
Sbjct: 434 LERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENL 493

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L+++ N++  LP E+ +LKNL  LDL  N    LPKEIG    L TLDL++N+L  +P
Sbjct: 494 QTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 279 DMLGNLINLTRLRLSYNRL 297
             +G L NL  L L  N+ 
Sbjct: 554 TEIGQLQNLQWLYLQNNQF 572


>gi|418693267|ref|ZP_13254330.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400356925|gb|EJP13083.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 595

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 170/507 (33%), Positives = 252/507 (49%), Gaps = 54/507 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  + +L +L+EL L  N L +LP +IG + NL  L L +N L + P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L  LDL  N+L  LP  + +L +L+ L L  N++ T   +I  L NL  L + +
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL TLDL +N    LPKEIG    L TL+LQ N+L  +P  +G L 
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  NRL  +P+ + +  +L         L++LP   +  L ++  + L  N+ T
Sbjct: 233 NLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKE-MGQLKNLQTLNLVNNRLT 291

Query: 346 AYPSGGPTQFTSVYSINF--------EHNQIDKI-------------------------- 371
             P     Q  ++  +          E  +I K+                          
Sbjct: 292 VLPK-EIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEE 350

Query: 372 PYGIFS-----------------RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
           P  +F                  + +NL ++ + D   ++LP ++     L  L LG N 
Sbjct: 351 PLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNG 410

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           + K+  +I  L NLE L L  N L++LP  IG LR L+ L L +N L+  P EI  LK+L
Sbjct: 411 LKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKL 470

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           Q+L L  NQ  + P+ IG L NL  L++  N L ++P EI  L+NL  L LNDN     +
Sbjct: 471 QKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQ-FTVL 529

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEI 561
           P E+     LQ + L N  L+ +P+EI
Sbjct: 530 PKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 153/442 (34%), Positives = 238/442 (53%), Gaps = 33/442 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L L K+ +T  P  + +L +L++L+L  N+L +LP +IG + NL  L L  N  T
Sbjct: 140 QNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFT 199

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L+L+ N+L  LP+ + +L +L+ LYLR NR+  +  +I  L NL  
Sbjct: 200 ILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQT 259

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN---- 276
           L   +N++  LP E+G+LKNL TL+L +N L  LPKEIG    L  L+L  N L      
Sbjct: 260 LCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERK 319

Query: 277 -----IPDMLGNL-----------INLTR--------LRLSYNRLESV-PETLSKCVHLN 311
                 PD   +L           +NL +        LRL Y     + P+ + K  +L 
Sbjct: 320 RIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLR 379

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
           E  +  C  S+LP  + S L ++  + L  N     PS    Q  ++ ++N E N+++++
Sbjct: 380 ELYLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKKIPSE-IGQLRNLEALNLEANELERL 437

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + +NL ++++  N L   P ++     L +L+L  NQ +   ++I  L NL+ L
Sbjct: 438 PKEI-GQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTL 496

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  LP+ I  L+ L+ LDL +N+   LP EIG LK+LQ L L++NQL +LP  I
Sbjct: 497 NLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556

Query: 492 GHLTNLSYLSVGENNLQSIPEE 513
           G L NL +L + +NN  S  E+
Sbjct: 557 GQLQNLQWLYL-QNNQFSFEEQ 577



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 204/450 (45%), Gaps = 83/450 (18%)

Query: 145 YVTNLTCLGLAE----NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           ++  L+C   AE     +   L  +L N   +RVL+L   KL  LP  + +L +L+ L L
Sbjct: 19  FLITLSCEIQAEEVEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNL 78

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
           ++N + T+  +I  L NL  L +RDN++   P  + EL+ L +LDL+ N L  LP EIG 
Sbjct: 79  KWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGR 138

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  L L  N+L   P  +G L NL +L LS NRL ++P+ + +              
Sbjct: 139 LQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQ-------------- 184

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
                     L ++  + L  N+FT  P                             + +
Sbjct: 185 ----------LKNLQTLDLQNNQFTILPKE-------------------------IGQLQ 209

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           NL  +N++DN L +LP+++G    L EL L  N+++ L ++I  L NL+ L    N L  
Sbjct: 210 NLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTA 269

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA-IGHL---TN 496
           LP  +G L+ L+ L+L  N+L  LP EIG L+ LQ L L  N L    R  I  L   +N
Sbjct: 270 LPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 329

Query: 497 LSYLSVGENNL-------------------------QSIPEEIGTLENLHTLYLNDNTCL 531
           L    V E+ +                         Q  P+ I    NL  LYL D    
Sbjct: 330 LDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYD-CGF 388

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           + +P E++   NL+ ++L    L +IPSEI
Sbjct: 389 STLPKEISRLKNLKYLALGLNGLKKIPSEI 418



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 105/199 (52%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  N+  L L     + LP  + +L +L+ L L  N L  +PS+IG + NL  L L  N 
Sbjct: 374 KFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANE 433

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP  +  L+ L+ L L  N L   P  + +L  L+ L L  N+  T   +I  L NL
Sbjct: 434 LERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENL 493

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L+++ N++  LP E+ +LKNL  LDL  N    LPKEIG    L TLDL++N+L  +P
Sbjct: 494 QTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 279 DMLGNLINLTRLRLSYNRL 297
             +G L NL  L L  N+ 
Sbjct: 554 TEIGQLQNLQWLYLQNNQF 572


>gi|421124179|ref|ZP_15584449.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421135047|ref|ZP_15595177.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410020930|gb|EKO87725.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410438666|gb|EKP87752.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 595

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 170/507 (33%), Positives = 252/507 (49%), Gaps = 54/507 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  + +L +L+EL L  N L +LP +IG + NL  L L +N L + P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L  LDL  N+L  LP  + +L +L+ L L  N++ T   +I  L NL  L + +
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL TLDL +N    LPKEIG    L TL+LQ N+L  +P  +G L 
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  NRL  +P+ + +  +L         L++LP   +  L ++  + L  N+ T
Sbjct: 233 NLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKE-MGQLKNLQTLNLVNNRLT 291

Query: 346 AYPSGGPTQFTSVYSINF--------EHNQIDKI-------------------------- 371
             P     Q  ++  +          E  +I K+                          
Sbjct: 292 VLPK-EIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEE 350

Query: 372 PYGIFS-----------------RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
           P  +F                  + +NL ++ + D   ++LP ++     L  L LG N 
Sbjct: 351 PLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNG 410

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           + K+  +I  L NLE L L  N L++LP  IG LR L+ L L +N L+  P EI  LK+L
Sbjct: 411 LKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKL 470

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           Q+L L  NQ  + P+ IG L NL  L++  N L ++P EI  L+NL  L LNDN     +
Sbjct: 471 QKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQ-FTVL 529

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEI 561
           P E+     LQ + L N  L+ +P+EI
Sbjct: 530 PKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 154/442 (34%), Positives = 239/442 (54%), Gaps = 33/442 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L L K+ +T  P  + +L +L++L+L  N+L +LP +IG + NL  L L  N  T
Sbjct: 140 QNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFT 199

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L+L+ N+L  LP+ + +L +L+ LYLR NR+  +  +I  L NL M
Sbjct: 200 ILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQM 259

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN---- 276
           L   +N++  LP E+G+LKNL TL+L +N L  LPKEIG    L  L+L  N L      
Sbjct: 260 LCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERK 319

Query: 277 -----IPDMLGNL-----------INLTR--------LRLSYNRLESV-PETLSKCVHLN 311
                 PD   +L           +NL +        LRL Y     + P+ + K  +L 
Sbjct: 320 RIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLR 379

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
           E  +  C  S+LP  + S L ++  + L  N     PS    Q  ++ ++N E N+++++
Sbjct: 380 ELYLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKKIPSE-IGQLRNLEALNLEANELERL 437

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + +NL ++++  N L   P ++     L +L+L  NQ +   ++I  L NL+ L
Sbjct: 438 PKEI-GQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTL 496

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  LP+ I  L+ L+ LDL +N+   LP EIG LK+LQ L L++NQL +LP  I
Sbjct: 497 NLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556

Query: 492 GHLTNLSYLSVGENNLQSIPEE 513
           G L NL +L + +NN  S  E+
Sbjct: 557 GQLQNLQWLYL-QNNQFSFEEQ 577



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 205/450 (45%), Gaps = 83/450 (18%)

Query: 145 YVTNLTCLGLAE----NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           ++  L+C   AE     +   L  +L N   +RVL+L   KL  LP  + +L +L+ L L
Sbjct: 19  FLITLSCEIQAEEVEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNL 78

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
           ++N + T+  +I  L NL  L +RDN++   P  + EL+ L +LDL+ N L  LP EIG 
Sbjct: 79  KWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGR 138

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  L L  N+L   P  +G L NL +L LS NRL ++P+ + +              
Sbjct: 139 LQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQ-------------- 184

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
                     L ++  + L  N+FT  P                             + +
Sbjct: 185 ----------LKNLQTLDLQNNQFTILPKE-------------------------IGQLQ 209

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           NL  +N++DN L +LP+++G    L EL L  N+++ L ++I  L NL++L    N L  
Sbjct: 210 NLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTA 269

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA-IGHL---TN 496
           LP  +G L+ L+ L+L  N+L  LP EIG L+ LQ L L  N L    R  I  L   +N
Sbjct: 270 LPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 329

Query: 497 LSYLSVGENNL-------------------------QSIPEEIGTLENLHTLYLNDNTCL 531
           L    V E+ +                         Q  P+ I    NL  LYL D    
Sbjct: 330 LDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYD-CGF 388

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           + +P E++   NL+ ++L    L +IPSEI
Sbjct: 389 STLPKEISRLKNLKYLALGLNGLKKIPSEI 418



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 105/199 (52%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  N+  L L     + LP  + +L +L+ L L  N L  +PS+IG + NL  L L  N 
Sbjct: 374 KFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANE 433

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP  +  L+ L+ L L  N L   P  + +L  L+ L L  N+  T   +I  L NL
Sbjct: 434 LERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENL 493

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L+++ N++  LP E+ +LKNL  LDL  N    LPKEIG    L TLDL++N+L  +P
Sbjct: 494 QTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 279 DMLGNLINLTRLRLSYNRL 297
             +G L NL  L L  N+ 
Sbjct: 554 TEIGQLQNLQWLYLQNNQF 572


>gi|418672935|ref|ZP_13234265.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|410580042|gb|EKQ47873.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 738

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 161/453 (35%), Positives = 258/453 (56%), Gaps = 18/453 (3%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L+LS  + T LP  +E+L +L+EL L  N+LA+ P+ I  +  L  L L+EN L  
Sbjct: 49  NVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVM 108

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP+ +  LQ L+ L L  NKL   P  + +L +L+ L L+ N++ T+  +I  L NL  L
Sbjct: 109 LPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKL 168

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++R N++  LP E+G+L+NL TL+L  N L  LP EIG    L TL L  N+L   P  +
Sbjct: 169 NLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEI 228

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L L+ N+L+++P+ + +   L + N++G  +++LP G               
Sbjct: 229 GQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKG--------------- 273

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P+    Q  ++  ++  +N++  +P  I  + +NL  +++  N LT+LP ++  
Sbjct: 274 NQLTTLPA-EIGQLKNLQILSLSYNRLATLPREI-GQLQNLKSLDLGGNQLTTLPREINK 331

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L EL L  N+++ + ++I  L NL +L L NN +  LP  I   + L+ L+L  N+L
Sbjct: 332 LKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRL 391

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            +LP EIG LK L+ L L++N++  LP  IG L NL   ++  N L SIP+EIG L+NL 
Sbjct: 392 VTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLR 451

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
            LYL +N  L  +P ++    +L++++L   PL
Sbjct: 452 MLYL-ENNQLKTLPRQMEKLQDLEVLNLLINPL 483



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 171/539 (31%), Positives = 270/539 (50%), Gaps = 86/539 (15%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS++ +  LP  + +L +L+EL LY NKL + P +IG + NL  L L +N L +LP  
Sbjct: 99  LDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVE 158

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L  L+LR N+L  LP  + +L +L+ L L+ N++ T+  +I  L NL  L + +
Sbjct: 159 IGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSE 218

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL---------QHNELVN 276
           N++   P E+G+L+NL  LDL  N L+ LPKEIG    L  L+L         + N+L  
Sbjct: 219 NQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTT 278

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L NL  L LSYNRL ++P  + +  +L   ++ G  L++LP  + + L ++  
Sbjct: 279 LPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREI-NKLKNLKE 337

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L+ NK T  P     +  ++  +  ++N+I  +P  I  ++KNL ++N++ N L +LP
Sbjct: 338 LYLNGNKLTIVPKE-IWELENLTILRLKNNRISTLPKEI-EKSKNLQELNLRGNRLVTLP 395

Query: 397 LDLGTW-------------------VGLTE----LNLGTNQISKLSEDIQNLVNLEVLVL 433
            ++G                     +G  E     NL  N+++ + ++I NL NL +L L
Sbjct: 396 GEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYL 455

Query: 434 SNNLLKKLPSSIGNLRKLKCLDL--------EENKLESL--------------------- 464
            NN LK LP  +  L+ L+ L+L        E  K+++L                     
Sbjct: 456 ENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLN 515

Query: 465 ----------------------PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
                                 P EI  LK L+ L L    LV+LP+ I  L +L  LS+
Sbjct: 516 LALEQPLKILSLSLEYQQFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSL 575

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           G N L+S+P+EIG L NL +L +  N     +P E+A   NL+ + L+       P EI
Sbjct: 576 GLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI 634



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 157/433 (36%), Positives = 236/433 (54%), Gaps = 18/433 (4%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L G    +LP +I  + NL  L L +N L + P  +  LQ+L  LDL  N+L  LP  
Sbjct: 53  LNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +L+ L L  N++ T   +I  L NL  L+++DN++  LP E+G+L+NL  L+L  
Sbjct: 113 IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 172

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L  LPKEIG    L TL+LQ N+L  +P  +G L NL  L LS N+L + P+ + +  
Sbjct: 173 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLE 232

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L E ++ G  L +LP   +  L  +  + L  N+ T  P G               NQ+
Sbjct: 233 NLQELDLNGNQLKTLPKE-IGQLQKLEKLNLDGNQITTLPKG---------------NQL 276

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
             +P  I  + KNL  +++  N L +LP ++G    L  L+LG NQ++ L  +I  L NL
Sbjct: 277 TTLPAEI-GQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNL 335

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L L+ N L  +P  I  L  L  L L+ N++ +LP EI   K LQ L L+ N+LV+LP
Sbjct: 336 KELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLP 395

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMS 548
             IG L  L  L++  N ++ +P EIG LENL    L+ N  L +IP E+    NL+++ 
Sbjct: 396 GEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNK-LASIPKEIGNLQNLRMLY 454

Query: 549 LDNCPLSQIPSEI 561
           L+N  L  +P ++
Sbjct: 455 LENNQLKTLPRQM 467



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 160/489 (32%), Positives = 247/489 (50%), Gaps = 64/489 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYL---------YGNKLASLPSQIGYVTNLTC 151
           EN+  LDL+ + +  LP  + +L  LE+L L          GN+L +LP++IG + NL  
Sbjct: 232 ENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQI 291

Query: 152 LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD 211
           L L+ N L +LP  +  LQ L+ LDL  N+L  LP  + KL +LK LYL  N++  V  +
Sbjct: 292 LSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKE 351

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTM-------- 263
           I  L NL++L +++N+I  LP E+ + KNL  L+L  N L  LP EIG   +        
Sbjct: 352 IWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLEN 411

Query: 264 ---------------LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
                          L   +L  N+L +IP  +GNL NL  L L  N+L+++P  + K  
Sbjct: 412 NRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQ 471

Query: 309 HLNEFNV----------------------------EGCALSSLPDGLLSSLTSINNITLS 340
            L   N+                            EG    +L   L   L  I +++L 
Sbjct: 472 DLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLNLALEQPL-KILSLSLE 530

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
             +F+ +P     +  ++ S++     +  +P  I  R K+L ++++  N L SLP ++G
Sbjct: 531 YQQFSLFPKE-ILKLKNLRSLSLYDTSLVALPKEIV-RLKHLERLSLGLNQLKSLPKEIG 588

Query: 401 TWVGLTELNLGTN-QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
               L  L++G N +   L ++I  L NL  L+L+ N  K  P  I  L+KL  L++  N
Sbjct: 589 LLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTN 648

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L++LP +IG LK LQ L L  N+L +LP  IG L NL+ L +  N ++++PEEI  L+N
Sbjct: 649 QLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQN 708

Query: 520 LHTLYLNDN 528
           L  L L +N
Sbjct: 709 LRKLTLYEN 717



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 167/318 (52%), Gaps = 13/318 (4%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  L+L       +P  +  L NL  L L  N+L + P  + +   L  
Sbjct: 39  DLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLES 98

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            ++    L  LP+  +  L ++  + L +NK   +P     Q  ++ ++N + NQ+  +P
Sbjct: 99  LDLSENRLVMLPNE-IGRLQNLQELGLYKNKLITFPK-EIGQLQNLQTLNLQDNQLATLP 156

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + +NL K+N++ N LT LP ++G    L  LNL  NQ++ L  +I  L NL+ L 
Sbjct: 157 VEI-GQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLG 215

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA-- 490
           LS N L   P  IG L  L+ LDL  N+L++LP EIG L++L++L L  NQ+ +LP+   
Sbjct: 216 LSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQ 275

Query: 491 -------IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
                  IG L NL  LS+  N L ++P EIG L+NL +L L  N  L  +P E+    N
Sbjct: 276 LTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQ-LTTLPREINKLKN 334

Query: 544 LQIMSLDNCPLSQIPSEI 561
           L+ + L+   L+ +P EI
Sbjct: 335 LKELYLNGNKLTIVPKEI 352



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 185/384 (48%), Gaps = 42/384 (10%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIG---------------- 144
           EN+  L L  + I+ LP  +EK  +L+EL L GN+L +LP +IG                
Sbjct: 356 ENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIK 415

Query: 145 -------YVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
                   + NL    L+ N L S+P  + NLQ LR+L L +N+L  LP  + KL  L++
Sbjct: 416 ILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 475

Query: 198 LYLRFN--------RIKTVHPDIQYLSNLSMLSMRDNKI-RELPPELGELKNLVTLDLAH 248
           L L  N        +I+ + P+     N+ +  + + +  R L   L +   +++L L +
Sbjct: 476 LNLLINPLLSEERKKIQALLPN----CNIDLRDVEEGRTYRNLNLALEQPLKILSLSLEY 531

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
                 PKEI     L +L L    LV +P  +  L +L RL L  N+L+S+P+ +    
Sbjct: 532 QQFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLR 591

Query: 309 HLNEFNVEG-CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQ 367
           +L   ++        LP   ++ L ++ ++ L++N+F  +P     +   +  +N   NQ
Sbjct: 592 NLRSLDIGANNEFEVLPKE-IARLQNLRSLLLNQNRFKIFPK-EIWELKKLVILNVNTNQ 649

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
           +D +P  I  R K L  +++  N LT+LP ++G    LTEL L  N+I  L E+I  L N
Sbjct: 650 LDALPEKI-GRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQN 708

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKL 451
           L  L L  N +   P  +  +RKL
Sbjct: 709 LRKLTLYENPIP--PQELDKIRKL 730


>gi|417762759|ref|ZP_12410747.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409941504|gb|EKN87133.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
          Length = 738

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 161/453 (35%), Positives = 258/453 (56%), Gaps = 18/453 (3%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L+LS  + T LP  +E+L +L+EL L  N+LA+ P+ I  +  L  L L+EN L  
Sbjct: 49  NVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVM 108

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP+ +  LQ L+ L L  NKL   P  + +L +L+ L L+ N++ T+  +I  L NL  L
Sbjct: 109 LPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKL 168

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++R N++  LP E+G+L+NL TL+L  N L  LP EIG    L TL L  N+L   P  +
Sbjct: 169 NLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEI 228

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L L+ N+L+++P+ + +   L + N++G  +++LP G               
Sbjct: 229 GQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKG--------------- 273

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P+    Q  ++  ++  +N++  +P  I  + +NL  +++  N LT+LP ++  
Sbjct: 274 NQLTTLPA-EIGQLKNLQILSLSYNRLATLPREI-GQLQNLKSLDLGGNQLTTLPREINK 331

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L EL L  N+++ + ++I  L NL +L L NN +  LP  I   + L+ L+L  N+L
Sbjct: 332 LKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRL 391

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            +LP EIG LK L+ L L++N++  LP  IG L NL   ++  N L SIP+EIG L+NL 
Sbjct: 392 VTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLR 451

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
            LYL +N  L  +P ++    +L++++L   PL
Sbjct: 452 MLYL-ENNQLKTLPRQMEKLQDLEVLNLLINPL 483



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 171/539 (31%), Positives = 270/539 (50%), Gaps = 86/539 (15%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS++ +  LP  + +L +L+EL LY NKL + P +IG + NL  L L +N L +LP  
Sbjct: 99  LDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVE 158

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L  L+LR N+L  LP  + +L +L+ L L+ N++ T+  +I  L NL  L + +
Sbjct: 159 IGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSE 218

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL---------QHNELVN 276
           N++   P E+G+L+NL  LDL  N L+ LPKEIG    L  L+L         + N+L  
Sbjct: 219 NQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTT 278

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L NL  L LSYNRL ++P  + +  +L   ++ G  L++LP  + + L ++  
Sbjct: 279 LPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREI-NKLKNLKE 337

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L+ NK T  P     +  ++  +  ++N+I  +P  I  ++KNL ++N++ N L +LP
Sbjct: 338 LYLNGNKLTIVPKE-IWELENLTILRLKNNRISTLPKEI-EKSKNLQELNLRGNRLVTLP 395

Query: 397 LDLGTW-------------------VGLTE----LNLGTNQISKLSEDIQNLVNLEVLVL 433
            ++G                     +G  E     NL  N+++ + ++I NL NL +L L
Sbjct: 396 GEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYL 455

Query: 434 SNNLLKKLPSSIGNLRKLKCLDL--------EENKLESL--------------------- 464
            NN LK LP  +  L+ L+ L+L        E  K+++L                     
Sbjct: 456 ENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLN 515

Query: 465 ----------------------PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
                                 P EI  LK L+ L L    LV+LP+ I  L +L  LS+
Sbjct: 516 LALEQPLKILSLSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSL 575

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           G N L+S+P+EIG L NL +L +  N     +P E+A   NL+ + L+       P EI
Sbjct: 576 GLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI 634



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 157/433 (36%), Positives = 236/433 (54%), Gaps = 18/433 (4%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L G    +LP +I  + NL  L L +N L + P  +  LQ+L  LDL  N+L  LP  
Sbjct: 53  LNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +L+ L L  N++ T   +I  L NL  L+++DN++  LP E+G+L+NL  L+L  
Sbjct: 113 IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 172

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L  LPKEIG    L TL+LQ N+L  +P  +G L NL  L LS N+L + P+ + +  
Sbjct: 173 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLE 232

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L E ++ G  L +LP   +  L  +  + L  N+ T  P G               NQ+
Sbjct: 233 NLQELDLNGNQLKTLPKE-IGQLQKLEKLNLDGNQITTLPKG---------------NQL 276

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
             +P  I  + KNL  +++  N L +LP ++G    L  L+LG NQ++ L  +I  L NL
Sbjct: 277 TTLPAEI-GQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNL 335

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L L+ N L  +P  I  L  L  L L+ N++ +LP EI   K LQ L L+ N+LV+LP
Sbjct: 336 KELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLP 395

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMS 548
             IG L  L  L++  N ++ +P EIG LENL    L+ N  L +IP E+    NL+++ 
Sbjct: 396 GEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNK-LASIPKEIGNLQNLRMLY 454

Query: 549 LDNCPLSQIPSEI 561
           L+N  L  +P ++
Sbjct: 455 LENNQLKTLPRQM 467



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 160/489 (32%), Positives = 247/489 (50%), Gaps = 64/489 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYL---------YGNKLASLPSQIGYVTNLTC 151
           EN+  LDL+ + +  LP  + +L  LE+L L          GN+L +LP++IG + NL  
Sbjct: 232 ENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQI 291

Query: 152 LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD 211
           L L+ N L +LP  +  LQ L+ LDL  N+L  LP  + KL +LK LYL  N++  V  +
Sbjct: 292 LSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKE 351

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTM-------- 263
           I  L NL++L +++N+I  LP E+ + KNL  L+L  N L  LP EIG   +        
Sbjct: 352 IWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLEN 411

Query: 264 ---------------LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
                          L   +L  N+L +IP  +GNL NL  L L  N+L+++P  + K  
Sbjct: 412 NRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQ 471

Query: 309 HLNEFNV----------------------------EGCALSSLPDGLLSSLTSINNITLS 340
            L   N+                            EG    +L   L   L  I +++L 
Sbjct: 472 DLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLNLALEQPL-KILSLSLE 530

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
             +F+ +P     +  ++ S++     +  +P  I  R K+L ++++  N L SLP ++G
Sbjct: 531 YQQFSLFPKE-ILRLKNLRSLSLYDTSLVALPKEIV-RLKHLERLSLGLNQLKSLPKEIG 588

Query: 401 TWVGLTELNLGTN-QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
               L  L++G N +   L ++I  L NL  L+L+ N  K  P  I  L+KL  L++  N
Sbjct: 589 LLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTN 648

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L++LP +IG LK LQ L L  N+L +LP  IG L NL+ L +  N ++++PEEI  L+N
Sbjct: 649 QLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQN 708

Query: 520 LHTLYLNDN 528
           L  L L +N
Sbjct: 709 LRKLTLYEN 717



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 167/318 (52%), Gaps = 13/318 (4%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  L+L       +P  +  L NL  L L  N+L + P  + +   L  
Sbjct: 39  DLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLES 98

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            ++    L  LP+  +  L ++  + L +NK   +P     Q  ++ ++N + NQ+  +P
Sbjct: 99  LDLSENRLVMLPNE-IGRLQNLQELGLYKNKLITFPK-EIGQLQNLQTLNLQDNQLATLP 156

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + +NL K+N++ N LT LP ++G    L  LNL  NQ++ L  +I  L NL+ L 
Sbjct: 157 VEI-GQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLG 215

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA-- 490
           LS N L   P  IG L  L+ LDL  N+L++LP EIG L++L++L L  NQ+ +LP+   
Sbjct: 216 LSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQ 275

Query: 491 -------IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
                  IG L NL  LS+  N L ++P EIG L+NL +L L  N  L  +P E+    N
Sbjct: 276 LTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQ-LTTLPREINKLKN 334

Query: 544 LQIMSLDNCPLSQIPSEI 561
           L+ + L+   L+ +P EI
Sbjct: 335 LKELYLNGNKLTIVPKEI 352



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 185/384 (48%), Gaps = 42/384 (10%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIG---------------- 144
           EN+  L L  + I+ LP  +EK  +L+EL L GN+L +LP +IG                
Sbjct: 356 ENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIK 415

Query: 145 -------YVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
                   + NL    L+ N L S+P  + NLQ LR+L L +N+L  LP  + KL  L++
Sbjct: 416 ILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 475

Query: 198 LYLRFN--------RIKTVHPDIQYLSNLSMLSMRDNKI-RELPPELGELKNLVTLDLAH 248
           L L  N        +I+ + P+     N+ +  + + +  R L   L +   +++L L +
Sbjct: 476 LNLLINPLLSEERKKIQALLPN----CNIDLRDVEEGRTYRNLNLALEQPLKILSLSLEY 531

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
                 PKEI     L +L L    LV +P  +  L +L RL L  N+L+S+P+ +    
Sbjct: 532 QQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLR 591

Query: 309 HLNEFNVEG-CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQ 367
           +L   ++        LP   ++ L ++ ++ L++N+F  +P     +   +  +N   NQ
Sbjct: 592 NLRSLDIGANNEFEVLPKE-IARLQNLRSLLLNQNRFKIFPK-EIWELKKLVILNVNTNQ 649

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
           +D +P  I  R K L  +++  N LT+LP ++G    LTEL L  N+I  L E+I  L N
Sbjct: 650 LDALPEKI-GRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQN 708

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKL 451
           L  L L  N +   P  +  +RKL
Sbjct: 709 LRKLTLYENPIP--PQELDKIRKL 730


>gi|417776853|ref|ZP_12424685.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410573349|gb|EKQ36399.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
          Length = 738

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 161/453 (35%), Positives = 258/453 (56%), Gaps = 18/453 (3%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L+LS  + T LP  +E+L +L+EL L  N+LA+ P+ I  +  L  L L+EN L  
Sbjct: 49  NVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVM 108

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP+ +  LQ L+ L L  NKL   P  + +L +L+ L L+ N++ T+  +I  L NL  L
Sbjct: 109 LPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKL 168

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++R N++  LP E+G+L+NL TL+L  N L  LP EIG    L TL L  N+L   P  +
Sbjct: 169 NLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEI 228

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L L+ N+L+++P+ + +   L + N++G  +++LP G               
Sbjct: 229 GQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKG--------------- 273

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P+    Q  ++  ++  +N++  +P  I  + +NL  +++  N LT+LP ++  
Sbjct: 274 NQLTTLPA-EIGQLKNLQILSLSYNRLATLPREI-GQLQNLKSLDLGGNQLTTLPREINK 331

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L EL L  N+++ + ++I  L NL +L L NN +  LP  I   + L+ L+L  N+L
Sbjct: 332 LKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRL 391

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            +LP EIG LK L+ L L++N++  LP  IG L NL   ++  N L SIP+EIG L+NL 
Sbjct: 392 VTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLR 451

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
            LYL +N  L  +P ++    +L++++L   PL
Sbjct: 452 MLYL-ENNQLKTLPRQMEKLQDLEVLNLLINPL 483



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 171/539 (31%), Positives = 271/539 (50%), Gaps = 86/539 (15%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS++ +  LP  + +L +L+EL LY NKL + P +IG + NL  L L +N L +LP  
Sbjct: 99  LDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVE 158

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L  L+LR N+L  LP  + +L +L+ L L+ N++ T+  +I  L NL  L + +
Sbjct: 159 IGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSE 218

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL---------QHNELVN 276
           N++   P E+G+L+NL  LDL  N L+ LPKEIG    L  L+L         + N+L  
Sbjct: 219 NQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTT 278

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L NL  L LSYNRL ++P  + +  +L   ++ G  L++LP  + + L ++  
Sbjct: 279 LPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREI-NKLKNLKE 337

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L+ NK T  P     +  ++  +  ++N+I  +P  I  ++KNL ++N++ N L +LP
Sbjct: 338 LYLNGNKLTIVPKE-IWELENLTILRLKNNRISTLPKEI-EKSKNLQELNLRGNRLVTLP 395

Query: 397 LDLGTW-------------------VGLTE----LNLGTNQISKLSEDIQNLVNLEVLVL 433
            ++G                     +G  E     NL  N+++ + ++I NL NL +L L
Sbjct: 396 GEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYL 455

Query: 434 SNNLLKKLPSSIGNLRKLKCLDL--------EENKLESL--------------------- 464
            NN LK LP  +  L+ L+ L+L        E  K+++L                     
Sbjct: 456 ENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQALLPNCNIDLRDVEEGETYRNLN 515

Query: 465 ----------------------PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
                                 P EI  LK L+ L L    LV+LP+ I  L +L +LS+
Sbjct: 516 LALEQPLKILSLSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSL 575

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           G N L+S+P+EIG L NL +L +  N     +P E+A   NL+ + L+       P EI
Sbjct: 576 GLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI 634



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 157/433 (36%), Positives = 236/433 (54%), Gaps = 18/433 (4%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L G    +LP +I  + NL  L L +N L + P  +  LQ+L  LDL  N+L  LP  
Sbjct: 53  LNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +L+ L L  N++ T   +I  L NL  L+++DN++  LP E+G+L+NL  L+L  
Sbjct: 113 IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 172

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L  LPKEIG    L TL+LQ N+L  +P  +G L NL  L LS N+L + P+ + +  
Sbjct: 173 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLE 232

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L E ++ G  L +LP   +  L  +  + L  N+ T  P G               NQ+
Sbjct: 233 NLQELDLNGNQLKTLPKE-IGQLQKLEKLNLDGNQITTLPKG---------------NQL 276

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
             +P  I  + KNL  +++  N L +LP ++G    L  L+LG NQ++ L  +I  L NL
Sbjct: 277 TTLPAEI-GQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNL 335

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L L+ N L  +P  I  L  L  L L+ N++ +LP EI   K LQ L L+ N+LV+LP
Sbjct: 336 KELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLP 395

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMS 548
             IG L  L  L++  N ++ +P EIG LENL    L+ N  L +IP E+    NL+++ 
Sbjct: 396 GEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNK-LASIPKEIGNLQNLRMLY 454

Query: 549 LDNCPLSQIPSEI 561
           L+N  L  +P ++
Sbjct: 455 LENNQLKTLPRQM 467



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 168/487 (34%), Positives = 249/487 (51%), Gaps = 60/487 (12%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYL---------YGNKLASLPSQIGYVTNLTC 151
           EN+  LDL+ + +  LP  + +L  LE+L L          GN+L +LP++IG + NL  
Sbjct: 232 ENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQI 291

Query: 152 LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD 211
           L L+ N L +LP  +  LQ L+ LDL  N+L  LP  + KL +LK LYL  N++  V  +
Sbjct: 292 LSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKE 351

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
           I  L NL++L +++N+I  LP E+ + KNL  L+L  N L  LP EIG   +L  L+L++
Sbjct: 352 IWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLEN 411

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL--LS 329
           N +  +P+ +G L NL    LS N+L S+P+ +    +L    +E   L +LP  +  L 
Sbjct: 412 NRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQ 471

Query: 330 SLTSIN---NITLS--RNKFTAY----------PSGGPT---------QFTSVYSINFEH 365
            L  +N   N  LS  R K  A              G T         Q   + S++ E+
Sbjct: 472 DLEVLNLLINPLLSKERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSLSLEY 531

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKD-----------------------NLLTSLPLDLGTW 402
            Q    P  I  R KNL  +++ D                       N L SLP ++G  
Sbjct: 532 QQFSLFPKEIL-RLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLL 590

Query: 403 VGLTELNLGTN-QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
             L  L++G N +   L ++I  L NL  L+L+ N  K  P  I  L+KL  L++  N+L
Sbjct: 591 RNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQL 650

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
           ++LP +IG LK LQ L L  N+L +LP  IG L NL+ L +  N ++++PEEI  L+NL 
Sbjct: 651 DALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLR 710

Query: 522 TLYLNDN 528
            L L +N
Sbjct: 711 KLTLYEN 717



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 167/318 (52%), Gaps = 13/318 (4%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  L+L       +P  +  L NL  L L  N+L + P  + +   L  
Sbjct: 39  DLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLES 98

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            ++    L  LP+  +  L ++  + L +NK   +P     Q  ++ ++N + NQ+  +P
Sbjct: 99  LDLSENRLVMLPNE-IGRLQNLQELGLYKNKLITFPK-EIGQLQNLQTLNLQDNQLATLP 156

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + +NL K+N++ N LT LP ++G    L  LNL  NQ++ L  +I  L NL+ L 
Sbjct: 157 VEI-GQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLG 215

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA-- 490
           LS N L   P  IG L  L+ LDL  N+L++LP EIG L++L++L L  NQ+ +LP+   
Sbjct: 216 LSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQ 275

Query: 491 -------IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
                  IG L NL  LS+  N L ++P EIG L+NL +L L  N  L  +P E+    N
Sbjct: 276 LTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQ-LTTLPREINKLKN 334

Query: 544 LQIMSLDNCPLSQIPSEI 561
           L+ + L+   L+ +P EI
Sbjct: 335 LKELYLNGNKLTIVPKEI 352



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 180/380 (47%), Gaps = 34/380 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIG---------------- 144
           EN+  L L  + I+ LP  +EK  +L+EL L GN+L +LP +IG                
Sbjct: 356 ENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIK 415

Query: 145 -------YVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
                   + NL    L+ N L S+P  + NLQ LR+L L +N+L  LP  + KL  L++
Sbjct: 416 ILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 475

Query: 198 LYLRFN-RIKTVHPDIQYLSNLSMLSMRD----NKIRELPPELGELKNLVTLDLAHNHLE 252
           L L  N  +      IQ L     + +RD       R L   L +   +++L L +    
Sbjct: 476 LNLLINPLLSKERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFS 535

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
             PKEI     L +L L    LV +P  +  L +L  L L  N+L+S+P+ +    +L  
Sbjct: 536 LFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRS 595

Query: 313 FNVEG-CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
            ++        LP   ++ L ++ ++ L++N+F  +P     +   +  +N   NQ+D +
Sbjct: 596 LDIGANNEFEVLPKE-IARLQNLRSLLLNQNRFKIFPK-EIWELKKLVILNVNTNQLDAL 653

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  R K L  +++  N LT+LP ++G    LTEL L  N+I  L E+I  L NL  L
Sbjct: 654 PEKI-GRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKL 712

Query: 432 VLSNNLLKKLPSSIGNLRKL 451
            L  N +   P  +  +RKL
Sbjct: 713 TLYENPIP--PQELDKIRKL 730


>gi|418730631|ref|ZP_13289125.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774840|gb|EKR54844.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 595

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 170/507 (33%), Positives = 252/507 (49%), Gaps = 54/507 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  + +L +L+EL L  N L +LP +IG + NL  L L +N L + P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L  LDL  N+L  LP  + +L +L+ L L  N++ T   +I  L NL  L + +
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL TLDL +N    LPKEIG    L TL+LQ N+L  +P  +G L 
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  NRL  +P+ + +  +L         L++LP   +  L ++  + L  N+ T
Sbjct: 233 NLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKE-MGQLKNLQTLNLVNNRLT 291

Query: 346 AYPSGGPTQFTSVYSINF--------EHNQIDKI-------------------------- 371
             P     Q  ++  +          E  +I K+                          
Sbjct: 292 VLPK-EIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEE 350

Query: 372 PYGIFS-----------------RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
           P  +F                  + +NL ++ + D   ++LP ++     L  L LG N 
Sbjct: 351 PLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNG 410

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           + K+  +I  L NLE L L  N L++LP  IG LR L+ L L +N L+  P EI  LK+L
Sbjct: 411 LKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKL 470

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           Q+L L  NQ  + P+ IG L NL  L++  N L ++P EI  L+NL  L LNDN     +
Sbjct: 471 QKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQ-FTVL 529

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEI 561
           P E+     LQ + L N  L+ +P+EI
Sbjct: 530 PKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 154/442 (34%), Positives = 239/442 (54%), Gaps = 33/442 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L L K+ +T  P  + +L +L++L+L  N+L +LP +IG + NL  L L  N  T
Sbjct: 140 QNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFT 199

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L+L+ N+L  LP+ + +L +L+ LYLR NR+  +  +I  L NL M
Sbjct: 200 ILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQM 259

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN---- 276
           L   +N++  LP E+G+LKNL TL+L +N L  LPKEIG    L  L+L  N L      
Sbjct: 260 LCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERK 319

Query: 277 -----IPDMLGNL-----------INLTR--------LRLSYNRLESV-PETLSKCVHLN 311
                 PD   +L           +NL +        LRL Y     + P+ + K  +L 
Sbjct: 320 RIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLR 379

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
           E  +  C  S+LP  + S L ++  + L  N     PS    Q  ++ ++N E N+++++
Sbjct: 380 ELYLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKKIPSE-IGQLRNLEALNLEANELERL 437

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + +NL ++++  N L   P ++     L +L+L  NQ +   ++I  L NL+ L
Sbjct: 438 PKEI-GQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTL 496

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  LP+ I  L+ L+ LDL +N+   LP EIG LK+LQ L L++NQL +LP  I
Sbjct: 497 NLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556

Query: 492 GHLTNLSYLSVGENNLQSIPEE 513
           G L NL +L + +NN  S  E+
Sbjct: 557 GQLQNLQWLYL-QNNQFSFEEQ 577



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 197/430 (45%), Gaps = 79/430 (18%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L  +L N   +RVL+L   KL  LP  + +L +L+ L L++N + T+  +I  L NL  
Sbjct: 39  DLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQE 98

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +RDN++   P  + EL+ L +LDL+ N L  LP EIG    L  L L  N+L   P  
Sbjct: 99  LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 158

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL +L LS NRL ++P+ + +                        L ++  + L 
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQ------------------------LKNLQTLDLQ 194

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+FT  P                             + +NL  +N++DN L +LP+++G
Sbjct: 195 NNQFTILPKE-------------------------IGQLQNLQTLNLQDNQLATLPVEIG 229

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L EL L  N+++ L ++I  L NL++L    N L  LP  +G L+ L+ L+L  N+
Sbjct: 230 QLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNR 289

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRA-IGHL---TNLSYLSVGENNL--------- 507
           L  LP EIG L+ LQ L L  N L    R  I  L   +NL    V E+ +         
Sbjct: 290 LTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQE 349

Query: 508 ----------------QSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
                           Q  P+ I    NL  LYL D    + +P E++   NL+ ++L  
Sbjct: 350 EPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYD-CGFSTLPKEISRLKNLKYLALGL 408

Query: 552 CPLSQIPSEI 561
             L +IPSEI
Sbjct: 409 NGLKKIPSEI 418



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 105/199 (52%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  N+  L L     + LP  + +L +L+ L L  N L  +PS+IG + NL  L L  N 
Sbjct: 374 KFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANE 433

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP  +  L+ L+ L L  N L   P  + +L  L+ L L  N+  T   +I  L NL
Sbjct: 434 LERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENL 493

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L+++ N++  LP E+ +LKNL  LDL  N    LPKEIG    L TLDL++N+L  +P
Sbjct: 494 QTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 279 DMLGNLINLTRLRLSYNRL 297
             +G L NL  L L  N+ 
Sbjct: 554 TEIGQLQNLQWLYLQNNQF 572


>gi|417770843|ref|ZP_12418746.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680944|ref|ZP_13242181.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327382|gb|EJO79634.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409947186|gb|EKN97187.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665862|gb|EMF31349.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 590

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 173/493 (35%), Positives = 246/493 (49%), Gaps = 49/493 (9%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  + +L +L+EL L  N L +LP +IG + NL  L L +N L + P  
Sbjct: 48  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 107

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L  LDL  N+L  LP  + +L +L+ L L  N++ T   +I  L NL  L + +
Sbjct: 108 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 167

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL TLDL +N    LPKEIG    L TL+LQ N+L  +P  +G L 
Sbjct: 168 NRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 227

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  NRL  +P+ + +  +L         L++LP   +  L ++  + L  N+ T
Sbjct: 228 NLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKE-MGQLKNLQTLNLVNNRLT 286

Query: 346 AYPSGGPTQFTSVYSINF--------EHNQIDKI-------------------------- 371
             P     Q  ++  +          E  +I K+                          
Sbjct: 287 VLPK-EIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEE 345

Query: 372 PYGIFS---RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
           P  +F    + KN S++          P  +  +  L EL L     S L ++I  L NL
Sbjct: 346 PLKVFDLRLQYKNFSQL---------FPKVILKFRNLRELYLYDCGFSTLPKEISRLKNL 396

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L L  N LKK+PS IG LR L+ L+LE N+LE LP EIG L+ LQRL L  N L   P
Sbjct: 397 KYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFP 456

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMS 548
             I  L  L  L +  N   + P+EIG LENL TL L  N  L N+P E+    NLQ + 
Sbjct: 457 AEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQ-LTNLPAEIEQLKNLQELD 515

Query: 549 LDNCPLSQIPSEI 561
           L++   + +P EI
Sbjct: 516 LNDNQFTVLPKEI 528



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 159/456 (34%), Positives = 244/456 (53%), Gaps = 21/456 (4%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS++ +  LP  + +L +L++L LY NKL + P +IG + NL  L L+EN LT+LP  
Sbjct: 117 LDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE 176

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ LDL++N+   LP  + +L +L+ L L+ N++ T+  +I  L NL  L +R+
Sbjct: 177 IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN 236

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L+NL  L    N L  LPKE+G    L TL+L +N L  +P  +G L 
Sbjct: 237 NRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQ 296

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N     P +L +   + +           PD  L  L  +    + RN   
Sbjct: 297 NLQDLELLMN-----PLSLKERKRIQKL---------FPDSNL-DLREVAEDGVYRNLNL 341

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           A           V+ +  ++    ++   +  + +NL ++ + D   ++LP ++     L
Sbjct: 342 AQEEP-----LKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNL 396

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L LG N + K+  +I  L NLE L L  N L++LP  IG LR L+ L L +N L+  P
Sbjct: 397 KYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFP 456

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            EI  LK+LQ+L L  NQ  + P+ IG L NL  L++  N L ++P EI  L+NL  L L
Sbjct: 457 AEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDL 516

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           NDN     +P E+     LQ + L N  L+ +P+EI
Sbjct: 517 NDNQ-FTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 551



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 154/442 (34%), Positives = 239/442 (54%), Gaps = 33/442 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L L K+ +T  P  + +L +L++L+L  N+L +LP +IG + NL  L L  N  T
Sbjct: 135 QNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFT 194

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L+L+ N+L  LP+ + +L +L+ LYLR NR+  +  +I  L NL M
Sbjct: 195 ILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQM 254

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN---- 276
           L   +N++  LP E+G+LKNL TL+L +N L  LPKEIG    L  L+L  N L      
Sbjct: 255 LCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERK 314

Query: 277 -----IPDMLGNL-----------INLTR--------LRLSYNRLESV-PETLSKCVHLN 311
                 PD   +L           +NL +        LRL Y     + P+ + K  +L 
Sbjct: 315 RIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLR 374

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
           E  +  C  S+LP  + S L ++  + L  N     PS    Q  ++ ++N E N+++++
Sbjct: 375 ELYLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKKIPSE-IGQLRNLEALNLEANELERL 432

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + +NL ++++  N L   P ++     L +L+L  NQ +   ++I  L NL+ L
Sbjct: 433 PKEI-GQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTL 491

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  LP+ I  L+ L+ LDL +N+   LP EIG LK+LQ L L++NQL +LP  I
Sbjct: 492 NLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 551

Query: 492 GHLTNLSYLSVGENNLQSIPEE 513
           G L NL +L + +NN  S  E+
Sbjct: 552 GQLQNLQWLYL-QNNQFSFEEQ 572



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 205/450 (45%), Gaps = 83/450 (18%)

Query: 145 YVTNLTCLGLAE----NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           ++  L+C   AE     +   L  +L N   +RVL+L   KL  LP  + +L +L+ L L
Sbjct: 14  FLIYLSCEIQAEEVEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNL 73

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
           ++N + T+  +I  L NL  L +RDN++   P  + EL+ L +LDL+ N L  LP EIG 
Sbjct: 74  KWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGR 133

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  L L  N+L   P  +G L NL +L LS NRL ++P+ + +              
Sbjct: 134 LQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQ-------------- 179

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
                     L ++  + L  N+FT  P                             + +
Sbjct: 180 ----------LKNLQTLDLQNNQFTILPKE-------------------------IGQLQ 204

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           NL  +N++DN L +LP+++G    L EL L  N+++ L ++I  L NL++L    N L  
Sbjct: 205 NLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTA 264

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA-IGHL---TN 496
           LP  +G L+ L+ L+L  N+L  LP EIG L+ LQ L L  N L    R  I  L   +N
Sbjct: 265 LPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 324

Query: 497 LSYLSVGENNL-------------------------QSIPEEIGTLENLHTLYLNDNTCL 531
           L    V E+ +                         Q  P+ I    NL  LYL D    
Sbjct: 325 LDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYD-CGF 383

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           + +P E++   NL+ ++L    L +IPSEI
Sbjct: 384 STLPKEISRLKNLKYLALGLNGLKKIPSEI 413



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 105/199 (52%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  N+  L L     + LP  + +L +L+ L L  N L  +PS+IG + NL  L L  N 
Sbjct: 369 KFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANE 428

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP  +  L+ L+ L L  N L   P  + +L  L+ L L  N+  T   +I  L NL
Sbjct: 429 LERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENL 488

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L+++ N++  LP E+ +LKNL  LDL  N    LPKEIG    L TLDL++N+L  +P
Sbjct: 489 QTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 548

Query: 279 DMLGNLINLTRLRLSYNRL 297
             +G L NL  L L  N+ 
Sbjct: 549 TEIGQLQNLQWLYLQNNQF 567


>gi|418698103|ref|ZP_13259082.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762807|gb|EKR28966.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 595

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 169/507 (33%), Positives = 249/507 (49%), Gaps = 54/507 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  + +L +L+EL L  N L +LP +IG + NL  L L +N L + P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L  LDL  N+L  LP  + +L +L+ L L  N++ T   +I  L NL  L + +
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL TLDL  N    LPKEIG    L TL+L  N+L  +P  +G L 
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  NRL   P+ + +  +L         L++LP   +  L ++  + L  N+ T
Sbjct: 233 NLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKE-MGQLQNLQTLNLVNNRLT 291

Query: 346 AYPSGGPTQFTSVYSINF--------EHNQIDKI-------------------------- 371
            +P     Q  ++  +          E  +I K+                          
Sbjct: 292 VFPK-EIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEE 350

Query: 372 PYGIFS-----------------RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
           P  +F                  + +NL  +N+ D   ++LP ++     L  L LG N 
Sbjct: 351 PLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNG 410

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +  +  +I  L NLE L L  N L++LP  IG LR L+ L L +N L+  P EI  LK+L
Sbjct: 411 LKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKL 470

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           Q+L L  NQ  + P+ IG L NL  L++  N L ++  EIG L+NL  L LNDN     +
Sbjct: 471 QKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQ-FTVL 529

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEI 561
           P E+     LQ + L N  L+ +P+EI
Sbjct: 530 PKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 163/459 (35%), Positives = 245/459 (53%), Gaps = 16/459 (3%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS++ +  LP  + +L +L++L LY NKL + P +IG + NL  L L+EN LT+LP  
Sbjct: 122 LDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE 181

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ LDL+ N+   LP  + +L +L+ L L  N++ T+  +I  L NL  L +R+
Sbjct: 182 IGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRN 241

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++   P E+G+L+NL  L    N L  LPKE+G    L TL+L +N L   P  +G L 
Sbjct: 242 NRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQ 301

Query: 286 NLTRLRLSYNRLESVPE--TLSKCVHLNEFNVEGCALSSLPDGLLSSLT-------SINN 336
           NL  L L  N L S+ E   + K    +  ++   A     +G+  +L         +  
Sbjct: 302 NLQDLELLMNPL-SLKERKRIQKLFPDSNLDLREVA----ENGVYRNLNLAQEEPLKVFE 356

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           ++L    F+        +F ++  +N        +P  I SR KNL  + +  N L ++P
Sbjct: 357 LSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKNIP 415

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  LNL  N++ +L ++I  L NL+ L L  N LK  P+ I  L+KL+ LDL
Sbjct: 416 SEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDL 475

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+  + P EIG L+ LQ L LQ NQL +L   IG L NL  L + +N    +P+EIG 
Sbjct: 476 SVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGK 535

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           L+ L TL L +N  L  +P E+    NLQ + L N  LS
Sbjct: 536 LKKLQTLDLRNNQ-LTTLPTEIGQLQNLQWLYLQNNQLS 573



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 149/436 (34%), Positives = 236/436 (54%), Gaps = 32/436 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L L K+ +T  P  + +L +L++L+L  N+L +LP +IG + NL  L L +N  T
Sbjct: 140 QNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFT 199

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ L+ L+L  N+L  LP+ + +L +L+ LYLR NR+     +I  L NL M
Sbjct: 200 TLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQM 259

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL------ 274
           L   +N++  LP E+G+L+NL TL+L +N L   PKEIG    L  L+L  N L      
Sbjct: 260 LCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERK 319

Query: 275 ----------VNIPDMLGNLI----NLTR--------LRLSYNRL-ESVPETLSKCVHLN 311
                     +++ ++  N +    NL +        L L Y    +S P+ + K  +L 
Sbjct: 320 RIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLR 379

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
             N+  C  S+LP  + S L ++  + L  N     PS    Q  ++ ++N E N+++++
Sbjct: 380 GLNLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKNIPSE-IGQLKNLEALNLEANELERL 437

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + +NL K+++  N L   P ++     L +L+L  NQ +   ++I  L NL+ L
Sbjct: 438 PKEI-GQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTL 496

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  L + IG L+ L+ LDL +N+   LP EIG LK+LQ L L++NQL +LP  I
Sbjct: 497 NLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556

Query: 492 GHLTNLSYLSVGENNL 507
           G L NL +L +  N L
Sbjct: 557 GQLQNLQWLYLQNNQL 572



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 138/430 (32%), Positives = 217/430 (50%), Gaps = 33/430 (7%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L  +L N   +RVL+L   KL  LP  + +L +L+ L L++N + T+  +I  L NL  
Sbjct: 39  DLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQE 98

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +RDN++   P  + EL+ L +LDL+ N L  LP EIG    L  L L  N+L   P  
Sbjct: 99  LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 158

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL +L LS NRL ++P+ + +  +L   +++    ++LP   +  L ++  + LS
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKE-IGQLQNLQTLNLS 217

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P     Q  ++  +   +N++   P  I  + +NL  +   +N LT+LP ++G
Sbjct: 218 DNQLATLPV-EIGQLQNLQELYLRNNRLTVFPKEI-GQLQNLQMLCSPENRLTALPKEMG 275

Query: 401 TWVGLTELNLGTNQISKLSEDI---QNLVNLEVLV--LS----NNLLKKLPSSIGNLRK- 450
               L  LNL  N+++   ++I   QNL +LE+L+  LS      + K  P S  +LR+ 
Sbjct: 276 QLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREV 335

Query: 451 ----------------LKCLDLE---ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
                           LK  +L    ++  +S P  I   + L+ L L      +LP+ I
Sbjct: 336 AENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEI 395

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
             L NL YL++G N L++IP EIG L+NL  L L  N  L  +P E+    NLQ +SL  
Sbjct: 396 SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE-LERLPKEIGQLRNLQKLSLHQ 454

Query: 552 CPLSQIPSEI 561
             L   P+EI
Sbjct: 455 NTLKIFPAEI 464



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 108/199 (54%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  N+  L+L     + LP  + +L +L+ L L  N L ++PS+IG + NL  L L  N 
Sbjct: 374 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 433

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP  +  L+ L+ L L  N L   P  + +L  L+ L L  N+  T   +I  L NL
Sbjct: 434 LERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENL 493

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L+++ N++  L  E+G+L+NL  LDL  N    LPKEIG    L TLDL++N+L  +P
Sbjct: 494 QTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 279 DMLGNLINLTRLRLSYNRL 297
             +G L NL  L L  N+L
Sbjct: 554 TEIGQLQNLQWLYLQNNQL 572


>gi|255072337|ref|XP_002499843.1| predicted protein [Micromonas sp. RCC299]
 gi|226515105|gb|ACO61101.1| predicted protein [Micromonas sp. RCC299]
          Length = 412

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 140/382 (36%), Positives = 216/382 (56%), Gaps = 3/382 (0%)

Query: 137 ASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLK 196
            ++P+++G +T L  L +A N+LT LP  +  L  LR L L  N+L  +P  + +LTSL+
Sbjct: 18  GAVPAEVGRLTALRELNVARNALTLLPAEIGQLTSLRELCLTGNQLTSVPADIGQLTSLE 77

Query: 197 ILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPK 256
            L+L  NR+ +V  +I   + L  L +  NK+  +P E+G+L +L  L L  N L  LP 
Sbjct: 78  RLWLHGNRLTSVPAEIGQFAALIELWLWGNKLTSVPEEIGQLTSLTYLHLGSNQLTSLPA 137

Query: 257 EIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE 316
           EIG  T L  L+L  N+L N+P  +G L +L +L L+ N+L +VP    +   L E  ++
Sbjct: 138 EIGQLTALTELNLTENQLTNVPAEIGQLTSLVKLNLTKNQLTNVPAEFWRLTSLGELYLD 197

Query: 317 GCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIF 376
              L+S+P  +   LTS+  + L  N+ T+ P+    Q TS+  +    NQ+  +P  I 
Sbjct: 198 DNRLTSVPADI-GQLTSLTWLGLYGNQLTSVPAE-IGQLTSLELLRLSSNQLTSVPAEI- 254

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
            + ++L ++++  N LTS+PL++G    +TEL L  NQ++ L  +I  L +LE L L +N
Sbjct: 255 RQLRSLERLDLSGNQLTSVPLEIGQLTAMTELYLSYNQLTSLPAEIGQLTSLEKLYLGDN 314

Query: 437 LLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
            L  +P+ IG L  L  L L +N+L S+P EIG L  L+   L+ NQL SLP  +G LT+
Sbjct: 315 RLTSVPAEIGQLTSLWGLYLNDNQLTSVPAEIGQLTSLEIFQLERNQLTSLPTEVGQLTS 374

Query: 497 LSYLSVGENNLQSIPEEIGTLE 518
           L    +  N L S+P  I  LE
Sbjct: 375 LVEFRLRSNQLTSVPAAILELE 396



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 137/356 (38%), Positives = 202/356 (56%), Gaps = 8/356 (2%)

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
           V  ++  L+ L  L++  N +  LP E+G+L +L  L L  N L  +P +IG  T L  L
Sbjct: 20  VPAEVGRLTALRELNVARNALTLLPAEIGQLTSLRELCLTGNQLTSVPADIGQLTSLERL 79

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD-- 325
            L  N L ++P  +G    L  L L  N+L SVPE + +   L   ++    L+SLP   
Sbjct: 80  WLHGNRLTSVPAEIGQFAALIELWLWGNKLTSVPEEIGQLTSLTYLHLGSNQLTSLPAEI 139

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
           G L++LT +N   L+ N+ T  P+    Q TS+  +N   NQ+  +P   F R  +L ++
Sbjct: 140 GQLTALTELN---LTENQLTNVPAE-IGQLTSLVKLNLTKNQLTNVP-AEFWRLTSLGEL 194

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
            + DN LTS+P D+G    LT L L  NQ++ +  +I  L +LE+L LS+N L  +P+ I
Sbjct: 195 YLDDNRLTSVPADIGQLTSLTWLGLYGNQLTSVPAEIGQLTSLELLRLSSNQLTSVPAEI 254

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
             LR L+ LDL  N+L S+P EIG L  +  L L  NQL SLP  IG LT+L  L +G+N
Sbjct: 255 RQLRSLERLDLSGNQLTSVPLEIGQLTAMTELYLSYNQLTSLPAEIGQLTSLEKLYLGDN 314

Query: 506 NLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L S+P EIG L +L  LYLNDN  L ++P E+   ++L+I  L+   L+ +P+E+
Sbjct: 315 RLTSVPAEIGQLTSLWGLYLNDNQ-LTSVPAEIGQLTSLEIFQLERNQLTSLPTEV 369



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 136/386 (35%), Positives = 206/386 (53%), Gaps = 26/386 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+++++++T LP  + +LT L EL L GN+L S+P+ IG +T+L  L L  N LTS+P  
Sbjct: 33  LNVARNALTLLPAEIGQLTSLRELCLTGNQLTSVPADIGQLTSLERLWLHGNRLTSVPAE 92

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +     L  L L  NKL  +P  + +LTSL  L+L                         
Sbjct: 93  IGQFAALIELWLWGNKLTSVPEEIGQLTSLTYLHL-----------------------GS 129

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L  L  L+L  N L  +P EIG  T LV L+L  N+L N+P     L 
Sbjct: 130 NQLTSLPAEIGQLTALTELNLTENQLTNVPAEIGQLTSLVKLNLTKNQLTNVPAEFWRLT 189

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L  L L  NRL SVP  + +   L    + G  L+S+P   +  LTS+  + LS N+ T
Sbjct: 190 SLGELYLDDNRLTSVPADIGQLTSLTWLGLYGNQLTSVP-AEIGQLTSLELLRLSSNQLT 248

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P+    Q  S+  ++   NQ+  +P  I  +   ++++ +  N LTSLP ++G    L
Sbjct: 249 SVPA-EIRQLRSLERLDLSGNQLTSVPLEI-GQLTAMTELYLSYNQLTSLPAEIGQLTSL 306

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            +L LG N+++ +  +I  L +L  L L++N L  +P+ IG L  L+   LE N+L SLP
Sbjct: 307 EKLYLGDNRLTSVPAEIGQLTSLWGLYLNDNQLTSVPAEIGQLTSLEIFQLERNQLTSLP 366

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAI 491
            E+G L  L    L+SNQL S+P AI
Sbjct: 367 TEVGQLTSLVEFRLRSNQLTSVPAAI 392



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/227 (36%), Positives = 134/227 (59%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           +++ L+L+K+ +T++P    +LT L ELYL  N+L S+P+ IG +T+LT LGL  N LTS
Sbjct: 167 SLVKLNLTKNQLTNVPAEFWRLTSLGELYLDDNRLTSVPADIGQLTSLTWLGLYGNQLTS 226

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  +  L  L +L L  N+L  +P  + +L SL+ L L  N++ +V  +I  L+ ++ L
Sbjct: 227 VPAEIGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGNQLTSVPLEIGQLTAMTEL 286

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  LP E+G+L +L  L L  N L  +P EIG  T L  L L  N+L ++P  +
Sbjct: 287 YLSYNQLTSLPAEIGQLTSLEKLYLGDNRLTSVPAEIGQLTSLWGLYLNDNQLTSVPAEI 346

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
           G L +L   +L  N+L S+P  + +   L EF +    L+S+P  +L
Sbjct: 347 GQLTSLEIFQLERNQLTSLPTEVGQLTSLVEFRLRSNQLTSVPAAIL 393



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/172 (38%), Positives = 97/172 (56%), Gaps = 1/172 (0%)

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
            L  ++P ++G    L ELN+  N ++ L  +I  L +L  L L+ N L  +P+ IG L 
Sbjct: 15  GLTGAVPAEVGRLTALRELNVARNALTLLPAEIGQLTSLRELCLTGNQLTSVPADIGQLT 74

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            L+ L L  N+L S+P EIG    L  L L  N+L S+P  IG LT+L+YL +G N L S
Sbjct: 75  SLERLWLHGNRLTSVPAEIGQFAALIELWLWGNKLTSVPEEIGQLTSLTYLHLGSNQLTS 134

Query: 510 IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +P EIG L  L  L L +N  L N+P E+   ++L  ++L    L+ +P+E 
Sbjct: 135 LPAEIGQLTALTELNLTENQ-LTNVPAEIGQLTSLVKLNLTKNQLTNVPAEF 185


>gi|186681684|ref|YP_001864880.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
 gi|186464136|gb|ACC79937.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
          Length = 1185

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 158/492 (32%), Positives = 256/492 (52%), Gaps = 26/492 (5%)

Query: 92  EKEFL----RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYL---------------- 131
           +KE L    R   E    LDLS   +T LP  + KL  LE L L                
Sbjct: 3   QKELLQLIDRAVAEGWRELDLSGQELTELPVEIGKLQQLESLILGKKVEGYERVGDHFLE 62

Query: 132 --YGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVV 189
              GN L +LP ++  + NL  L ++ N L S+PD +  +  L  L L   +L E+P  +
Sbjct: 63  KVSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPDAI 122

Query: 190 YKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHN 249
             LT+L  L L +N+I  +   I  LSNL++L   DNKI ++P  +  L NL  L+L+ N
Sbjct: 123 ANLTNLTQLILSYNQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSN 182

Query: 250 HLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVH 309
            + ++P+ I   T L  L L  N++  IP+ +  L NLT L LS N++  +PE +++  +
Sbjct: 183 QITQIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDNKITEIPEAITQSTN 242

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
           L   ++    ++ +P+  ++ LT++  + LS N+ T  P       T++  ++   NQI 
Sbjct: 243 LTVLDLSSNQITKIPEA-IAQLTNLKLLYLSDNQITEIPEAL-ANLTNLMQLHLSSNQIT 300

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
           +IP  + +   NL+++ +  N +T +P  L     LT L L +NQI+++ E + NL NL 
Sbjct: 301 EIPEAL-ANLTNLTQLYLSGNQITEIPEALANLPNLTRLYLYSNQITEIPEALANLTNLI 359

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR 489
            LVL +N + ++P ++ NL  L  L L  N++  +P  +  L  L RL L+ NQ+  +P+
Sbjct: 360 QLVLFSNQIAEIPETLANLTNLIQLVLFSNQIAEIPETLAKLTNLTRLDLRFNQITQIPK 419

Query: 490 AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
            I +LTNL+ L +  N +  IPE +  L NL  LY + N  +  IP  +A  +NL  + L
Sbjct: 420 VIANLTNLTELHLSSNQITQIPEALANLTNLTQLYFSSNQ-ITQIPGAIAKLTNLTQLDL 478

Query: 550 DNCPLSQIPSEI 561
               +++IP  I
Sbjct: 479 SGNQITEIPEAI 490



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 155/479 (32%), Positives = 248/479 (51%), Gaps = 33/479 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+S + +  +P  V ++ HLEEL L   +L  +P  I  +TNLT L L+ N +T 
Sbjct: 81  NLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPDAIANLTNLTQLILSYNQITQ 140

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P+++A L  L VL    NK+ ++P  +  LT+L  L L  N+I  +   I  L+NL++L
Sbjct: 141 IPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSNQITQIPEVIAKLTNLTLL 200

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N+I E+P  + +L NL  LDL+ N + E+P+ I   T L  LDL  N++  IP+ +
Sbjct: 201 YLSGNQITEIPEAIAQLTNLTLLDLSDNKITEIPEAITQSTNLTVLDLSSNQITKIPEAI 260

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L LS N++  +PE L+   +L + ++    ++ +P+  L++LT++  + LS 
Sbjct: 261 AQLTNLKLLYLSDNQITEIPEALANLTNLMQLHLSSNQITEIPEA-LANLTNLTQLYLSG 319

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P                            +   NL+++ +  N +T +P  L  
Sbjct: 320 NQITEIPEA-------------------------LANLPNLTRLYLYSNQITEIPEALAN 354

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L +L L +NQI+++ E + NL NL  LVL +N + ++P ++  L  L  LDL  N++
Sbjct: 355 LTNLIQLVLFSNQIAEIPETLANLTNLIQLVLFSNQIAEIPETLAKLTNLTRLDLRFNQI 414

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
             +P  I  L  L  L L SNQ+  +P A+ +LTNL+ L    N +  IP  I  L NL 
Sbjct: 415 TQIPKVIANLTNLTELHLSSNQITQIPEALANLTNLTQLYFSSNQITQIPGAIAKLTNLT 474

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV-----VGGPSLIIRYLKM 575
            L L+ N  +  IP  +   S L+ + L   PL  I  EI+     VG    I  YL++
Sbjct: 475 QLDLSGNQ-ITEIPEAIESLSKLEKLDLRGNPLP-ISPEILGSSDDVGSVEDIFNYLQL 531


>gi|291240668|ref|XP_002740240.1| PREDICTED: ERBB2 interacting protein-like [Saccoglossus
           kowalevskii]
          Length = 1112

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 165/492 (33%), Positives = 253/492 (51%), Gaps = 39/492 (7%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           + N+DL K+ I  LPPS+  L  L  L++  N+L SLP  I  + NL+ L L  NSL +L
Sbjct: 54  VHNVDLKKNRIAKLPPSISTLKQLRMLHMNSNRLTSLPGSICKLRNLSTLCLERNSLKTL 113

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+S+ NLQQL  L L +N+++ LP  + KL +L+   +  N + ++   I  L+ L    
Sbjct: 114 PNSICNLQQLERLYLNNNQISHLPECIGKLRNLETFLISKNSLVSIPDSIGDLNKLQDFQ 173

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD--- 279
              NK+  LP  +G+L+NL  L ++ N L  +P  I +   L  L L  N L  +PD   
Sbjct: 174 AHRNKLSSLPESIGKLQNLTKLWVSRNSLTSIPDSICDLNKLQDLRLHTNNLSYLPDRIV 233

Query: 280 -------------------------MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
                                     +G L  L +LR+S N L  +P ++     L +  
Sbjct: 234 PESICDLHKLHDLQLHGNNIQFLPKRIGQLKWLRKLRMSSNSLTRLPHSICDLNKLEDLQ 293

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIP 372
           +    LSSLP   +  L  + N+++S N     P   G   Q T +Y+     NQI  +P
Sbjct: 294 LHMNKLSSLPSQ-IGKLKHVKNLSISGNSIKILPDSIGDLQQLTRLYA---HGNQISHLP 349

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGT---WVGLTELNLGTNQISKLSEDIQNLVNLE 429
             I+   +NL+ + +  N L ++ ++ GT      + +L L  N +S L EDI +L  L+
Sbjct: 350 ESIW-ELRNLTTMWISRNSLVTVSINNGTIRNCSQIQDLQLHKNSLSYLPEDIGSLHGLK 408

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR 489
            L +S NL K LPSSIG+L  L  L   +N++  LP  IG L++L+ + +Q N LVS+P 
Sbjct: 409 KLSVSGNLFKSLPSSIGHLTWLTRLYAHDNQITLLPESIGGLQDLKTMWVQENSLVSIPH 468

Query: 490 AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
            IGHL  L  L + +NNL S+P+ +G L NL TL+ ++N  L +IP  +     LQ + L
Sbjct: 469 NIGHLHQLEDLRIHKNNLSSLPDSVGDLTNLTTLWASNNK-LTSIPDSVCELHELQHLQL 527

Query: 550 DNCPLSQIPSEI 561
           D   L+ +P+ I
Sbjct: 528 DTNSLTFLPTNI 539



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 155/487 (31%), Positives = 241/487 (49%), Gaps = 40/487 (8%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           +SK+S+  +P S+  L  L++   + NKL+SLP  IG + NLT L ++ NSLTS+PDS+ 
Sbjct: 151 ISKNSLVSIPDSIGDLNKLQDFQAHRNKLSSLPESIGKLQNLTKLWVSRNSLTSIPDSIC 210

Query: 168 NLQQLRVLDLRHNKLNELP-----MVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           +L +L+ L L  N L+ LP       +  L  L  L L  N I+ +   I  L  L  L 
Sbjct: 211 DLNKLQDLRLHTNNLSYLPDRIVPESICDLHKLHDLQLHGNNIQFLPKRIGQLKWLRKLR 270

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           M  N +  LP  + +L  L  L L  N L  LP +IG    +  L +  N +  +PD +G
Sbjct: 271 MSSNSLTRLPHSICDLNKLEDLQLHMNKLSSLPSQIGKLKHVKNLSISGNSIKILPDSIG 330

Query: 283 NLINLTRLRLSYNRLESVPE--------------------------TLSKCVHLNEFNVE 316
           +L  LTRL    N++  +PE                          T+  C  + +  + 
Sbjct: 331 DLQQLTRLYAHGNQISHLPESIWELRNLTTMWISRNSLVTVSINNGTIRNCSQIQDLQLH 390

Query: 317 GCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYG 374
             +LS LP+ +  SL  +  +++S N F + PS  G  T  T +Y+     NQI  +P  
Sbjct: 391 KNSLSYLPEDI-GSLHGLKKLSVSGNLFKSLPSSIGHLTWLTRLYA---HDNQITLLPES 446

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           I    ++L  + +++N L S+P ++G    L +L +  N +S L + + +L NL  L  S
Sbjct: 447 I-GGLQDLKTMWVQENSLVSIPHNIGHLHQLEDLRIHKNNLSSLPDSVGDLTNLTTLWAS 505

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
           NN L  +P S+  L +L+ L L+ N L  LP  IG +  L+ L + +N L +LP  IG+L
Sbjct: 506 NNKLTSIPDSVCELHELQHLQLDTNSLTFLPTNIGKISWLKTLCVNNNSLTTLPDRIGNL 565

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
             L  L V  N L  +PE I  L+NL TL ++ N  L ++P  ++    L+    +N  L
Sbjct: 566 HTLEKLHVANNQLSQLPESIRKLKNLTTLVVSKN-ALVSMP-NMSYLHKLEQFRFENNEL 623

Query: 555 SQIPSEI 561
             +P  I
Sbjct: 624 QSLPRGI 630



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 150/581 (25%), Positives = 250/581 (43%), Gaps = 124/581 (21%)

Query: 102  NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
            N+  L  S + +T +P SV +L  L+ L L  N L  LP+ IG ++ L  L +  NSLT+
Sbjct: 498  NLTTLWASNNKLTSIPDSVCELHELQHLQLDTNSLTFLPTNIGKISWLKTLCVNNNSLTT 557

Query: 162  LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
            LPD + NL  L  L + +N+L++LP  + KL +L  L +  N + ++ P++ YL  L   
Sbjct: 558  LPDRIGNLHTLEKLHVANNQLSQLPESIRKLKNLTTLVVSKNALVSM-PNMSYLHKLEQF 616

Query: 222  SMRDNKIRELPPELGELKNLVTL----DLAHNH--LEEL------------PKEIGNCTM 263
               +N+++ LP  +  L++L T+    D+  N   +++L            P+   + TM
Sbjct: 617  RFENNELQSLPRGIDTLRHLHTIKFDVDIKDNKGKVQQLLSKLYNEETNSNPRPTESTTM 676

Query: 264  LVTLDLQHNE----------------------LVNIPDMLGNLINLTRLRLSYNRLESVP 301
                 L+H+E                      + N     GN+ +     +    LE + 
Sbjct: 677  STPTKLKHSEEVPMGAGIQRYVMGNKPKGQAIIFNNHTFNGNMADRDGTGIDERNLEKMF 736

Query: 302  ETLSKCVHLN--------EFNVEGC-------ALSSLPDGLLSSLTSINN---ITLSRNK 343
            E L   VH+         E  +  C       A+   PD   +SL  + N     +  + 
Sbjct: 737  ENLDITVHVYNDVTANDMETYIRACQGSESMKAVVVHPDAKKASLDVMPNEADFIIGYSS 796

Query: 344  FTAYPSGGPTQFTSVYSINFEHN-------------QIDKIPYGIFSRAKNLSKVNMKDN 390
               Y S   T+  S Y    + +              + + P  +    + + KV+++ N
Sbjct: 797  VPGYVSWRDTRRGSWYITKMDSHWNENEKEYIAVKSDLKEFPEKLLENFQRVRKVDLQSN 856

Query: 391  LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
             LT+LP D+     L  LN+  N++  L E +  L NL+ L+  NN L  LP + G L K
Sbjct: 857  YLTTLPEDINYSQKLYYLNINNNKLKCLPESLCELTNLKQLLAKNNELDTLPDNFGELSK 916

Query: 451  LKCLDLEENKLESLPNEIGFLKELQR---------------------------------- 476
            L+ L++  NK++SLP  IG L+ L +                                  
Sbjct: 917  LEYLNISNNKVKSLPESIGKLENLTQLCANNNSISELPDIRKLKKLTALYLGNNNKTRPN 976

Query: 477  ----------------LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
                            L +  N L SLP +I  L NL  L + EN L+S+P+EIG L +L
Sbjct: 977  SKFSECISNLPITLKTLWMFGNSLTSLPESISTLRNLEELMIQENKLESLPDEIGKLGSL 1036

Query: 521  HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
              L++++N  L ++P +++    LQ +SL +  L ++P  I
Sbjct: 1037 TKLWVHNN-LLKSLP-DISSLKQLQDLSLTDNKLEKLPEGI 1075



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 142/262 (54%), Gaps = 3/262 (1%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           I +L L K+S+++LP  +  L  L++L + GN   SLPS IG++T LT L   +N +T L
Sbjct: 384 IQDLQLHKNSLSYLPEDIGSLHGLKKLSVSGNLFKSLPSSIGHLTWLTRLYAHDNQITLL 443

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+S+  LQ L+ + ++ N L  +P  +  L  L+ L +  N + ++   +  L+NL+ L 
Sbjct: 444 PESIGGLQDLKTMWVQENSLVSIPHNIGHLHQLEDLRIHKNNLSSLPDSVGDLTNLTTLW 503

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
             +NK+  +P  + EL  L  L L  N L  LP  IG  + L TL + +N L  +PD +G
Sbjct: 504 ASNNKLTSIPDSVCELHELQHLQLDTNSLTFLPTNIGKISWLKTLCVNNNSLTTLPDRIG 563

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
           NL  L +L ++ N+L  +PE++ K  +L    V   AL S+P+  +S L  +       N
Sbjct: 564 NLHTLEKLHVANNQLSQLPESIRKLKNLTTLVVSKNALVSMPN--MSYLHKLEQFRFENN 621

Query: 343 KFTAYPSGGPTQFTSVYSINFE 364
           +  + P G  T    +++I F+
Sbjct: 622 ELQSLPRGIDT-LRHLHTIKFD 642



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 108/217 (49%), Gaps = 25/217 (11%)

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
           ++   GC LS+ P  LL                        T +T V++++ + N+I K+
Sbjct: 32  QYKGRGCGLSTFPGILL------------------------TTYTCVHNVDLKKNRIAKL 67

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I S  K L  ++M  N LTSLP  +     L+ L L  N +  L   I NL  LE L
Sbjct: 68  PPSI-STLKQLRMLHMNSNRLTSLPGSICKLRNLSTLCLERNSLKTLPNSICNLQQLERL 126

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L+NN +  LP  IG LR L+   + +N L S+P+ IG L +LQ      N+L SLP +I
Sbjct: 127 YLNNNQISHLPECIGKLRNLETFLISKNSLVSIPDSIGDLNKLQDFQAHRNKLSSLPESI 186

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G L NL+ L V  N+L SIP+ I  L  L  L L+ N
Sbjct: 187 GKLQNLTKLWVSRNSLTSIPDSICDLNKLQDLRLHTN 223



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 146/283 (51%), Gaps = 34/283 (12%)

Query: 251  LEELPKEI-GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVH 309
            L+E P+++  N   +  +DLQ N L  +P+ +     L  L ++ N+L+ +PE+L +  +
Sbjct: 834  LKEFPEKLLENFQRVRKVDLQSNYLTTLPEDINYSQKLYYLNINNNKLKCLPESLCELTN 893

Query: 310  LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
            L +   +   L +LPD                            + + +  +N  +N++ 
Sbjct: 894  LKQLLAKNNELDTLPDNF-------------------------GELSKLEYLNISNNKVK 928

Query: 370  KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI----SKLSEDIQNL 425
             +P  I  + +NL+++   +N ++ LP D+     LT L LG N      SK SE I NL
Sbjct: 929  SLPESI-GKLENLTQLCANNNSISELP-DIRKLKKLTALYLGNNNKTRPNSKFSECISNL 986

Query: 426  -VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
             + L+ L +  N L  LP SI  LR L+ L ++ENKLESLP+EIG L  L +L + +N L
Sbjct: 987  PITLKTLWMFGNSLTSLPESISTLRNLEELMIQENKLESLPDEIGKLGSLTKLWVHNNLL 1046

Query: 485  VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
             SLP  I  L  L  LS+ +N L+ +PE IG L++L ++  ND
Sbjct: 1047 KSLP-DISSLKQLQDLSLTDNKLEKLPEGIGNLKSLRSIRFND 1088



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 109/211 (51%), Gaps = 26/211 (12%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           + ++S+  +P ++  L  LE+L ++ N L+SLP  +G +TNLT L  + N LTS+PDS+ 
Sbjct: 458 VQENSLVSIPHNIGHLHQLEDLRIHKNNLSSLPDSVGDLTNLTTLWASNNKLTSIPDSVC 517

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
            L +L+ L L  N L  LP  + K++ LK L +  N + T                    
Sbjct: 518 ELHELQHLQLDTNSLTFLPTNIGKISWLKTLCVNNNSLTT-------------------- 557

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
              LP  +G L  L  L +A+N L +LP+ I     L TL +  N LV++P+M   L  L
Sbjct: 558 ---LPDRIGNLHTLEKLHVANNQLSQLPESIRKLKNLTTLVVSKNALVSMPNM-SYLHKL 613

Query: 288 TRLRLSYNRLESVPETLSKCVHLN--EFNVE 316
            + R   N L+S+P  +    HL+  +F+V+
Sbjct: 614 EQFRFENNELQSLPRGIDTLRHLHTIKFDVD 644



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 90/163 (55%), Gaps = 1/163 (0%)

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           L T+  +  ++L  N+I+KL   I  L  L +L +++N L  LP SI  LR L  L LE 
Sbjct: 48  LTTYTCVHNVDLKKNRIAKLPPSISTLKQLRMLHMNSNRLTSLPGSICKLRNLSTLCLER 107

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N L++LPN I  L++L+RL L +NQ+  LP  IG L NL    + +N+L SIP+ IG L 
Sbjct: 108 NSLKTLPNSICNLQQLERLYLNNNQISHLPECIGKLRNLETFLISKNSLVSIPDSIGDLN 167

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L     + N  L+++P  +    NL  + +    L+ IP  I
Sbjct: 168 KLQDFQAHRNK-LSSLPESIGKLQNLTKLWVSRNSLTSIPDSI 209



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 32/284 (11%)

Query: 85   IQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIG 144
            +++DL    E L    + +  +DL  + +T LP  +     L  L +  NKL  LP  + 
Sbjct: 830  VKSDLKEFPEKLLENFQRVRKVDLQSNYLTTLPEDINYSQKLYYLNINNNKLKCLPESLC 889

Query: 145  YVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR 204
             +TNL  L    N L +LPD+   L +L  L++ +NK+  LP  + K             
Sbjct: 890  ELTNLKQLLAKNNELDTLPDNFGELSKLEYLNISNNKVKSLPESIGK------------- 936

Query: 205  IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC--- 261
                      L NL+ L   +N I EL P++ +LK L  L L +N+      +   C   
Sbjct: 937  ----------LENLTQLCANNNSISEL-PDIRKLKKLTALYLGNNNKTRPNSKFSECISN 985

Query: 262  --TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA 319
                L TL +  N L ++P+ +  L NL  L +  N+LES+P+ + K   L +  V    
Sbjct: 986  LPITLKTLWMFGNSLTSLPESISTLRNLEELMIQENKLESLPDEIGKLGSLTKLWVHNNL 1045

Query: 320  LSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
            L SLPD  +SSL  + +++L+ NK    P  G     S+ SI F
Sbjct: 1046 LKSLPD--ISSLKQLQDLSLTDNKLEKLPE-GIGNLKSLRSIRF 1086


>gi|418703936|ref|ZP_13264818.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410766420|gb|EKR37105.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 595

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 169/507 (33%), Positives = 251/507 (49%), Gaps = 54/507 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  + +L +L+EL L  N L +LP +IG + NL  L L +N L + P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L  LDL  N+L  LP  + +L +L+ L L  N++ T   +I  L NL  L + +
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL TLDL +N    LPKEIG    L TL+LQ N+L  +P  +G L 
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  NRL  +P+ + +  +L         L++ P   +  L ++  + L  N+ T
Sbjct: 233 NLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTAFPKE-MGQLKNLQTLNLVNNRLT 291

Query: 346 AYPSGGPTQFTSVYSINF--------EHNQIDKI-------------------------- 371
             P     Q  ++  +          E  +I K+                          
Sbjct: 292 VLPK-EIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEE 350

Query: 372 PYGIFS-----------------RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
           P  +F                  + +NL ++ + D   ++LP ++     L  L LG N 
Sbjct: 351 PLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNG 410

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           + K+  +I  L NLE L L  N L++LP  IG LR L+ L L +N L+  P EI  LK+L
Sbjct: 411 LKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKL 470

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           Q+L L  NQ  + P+ IG L NL  L++  N L ++P EI  L+NL  L LNDN     +
Sbjct: 471 QKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQ-FTVL 529

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEI 561
           P E+     LQ + L N  L+ +P+EI
Sbjct: 530 PKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 153/442 (34%), Positives = 238/442 (53%), Gaps = 33/442 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L L K+ +T  P  + +L +L++L+L  N+L +LP +IG + NL  L L  N  T
Sbjct: 140 QNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFT 199

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L+L+ N+L  LP+ + +L +L+ LYLR NR+  +  +I  L NL M
Sbjct: 200 ILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQM 259

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN---- 276
           L   +N++   P E+G+LKNL TL+L +N L  LPKEIG    L  L+L  N L      
Sbjct: 260 LCSPENRLTAFPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERK 319

Query: 277 -----IPDMLGNL-----------INLTR--------LRLSYNRLESV-PETLSKCVHLN 311
                 PD   +L           +NL +        LRL Y     + P+ + K  +L 
Sbjct: 320 RIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLR 379

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
           E  +  C  S+LP  + S L ++  + L  N     PS    Q  ++ ++N E N+++++
Sbjct: 380 ELYLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKKIPSE-IGQLRNLEALNLEANELERL 437

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + +NL ++++  N L   P ++     L +L+L  NQ +   ++I  L NL+ L
Sbjct: 438 PKEI-GQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTL 496

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  LP+ I  L+ L+ LDL +N+   LP EIG LK+LQ L L++NQL +LP  I
Sbjct: 497 NLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556

Query: 492 GHLTNLSYLSVGENNLQSIPEE 513
           G L NL +L + +NN  S  E+
Sbjct: 557 GQLQNLQWLYL-QNNQFSFEEQ 577



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 204/450 (45%), Gaps = 83/450 (18%)

Query: 145 YVTNLTCLGLAE----NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           ++  L+C   AE     +   L  +L N   +RVL+L   KL  LP  + +L +L+ L L
Sbjct: 19  FLITLSCEIQAEEVEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNL 78

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
           ++N + T+  +I  L NL  L +RDN++   P  + EL+ L +LDL+ N L  LP EIG 
Sbjct: 79  KWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGR 138

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  L L  N+L   P  +G L NL +L LS NRL ++P+ + +              
Sbjct: 139 LQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQ-------------- 184

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
                     L ++  + L  N+FT  P                             + +
Sbjct: 185 ----------LKNLQTLDLQNNQFTILPKE-------------------------IGQLQ 209

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           NL  +N++DN L +LP+++G    L EL L  N+++ L ++I  L NL++L    N L  
Sbjct: 210 NLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTA 269

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA-IGHL---TN 496
            P  +G L+ L+ L+L  N+L  LP EIG L+ LQ L L  N L    R  I  L   +N
Sbjct: 270 FPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 329

Query: 497 LSYLSVGENNL-------------------------QSIPEEIGTLENLHTLYLNDNTCL 531
           L    V E+ +                         Q  P+ I    NL  LYL D    
Sbjct: 330 LDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYD-CGF 388

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           + +P E++   NL+ ++L    L +IPSEI
Sbjct: 389 STLPKEISRLKNLKYLALGLNGLKKIPSEI 418



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 105/199 (52%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  N+  L L     + LP  + +L +L+ L L  N L  +PS+IG + NL  L L  N 
Sbjct: 374 KFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANE 433

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP  +  L+ L+ L L  N L   P  + +L  L+ L L  N+  T   +I  L NL
Sbjct: 434 LERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENL 493

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L+++ N++  LP E+ +LKNL  LDL  N    LPKEIG    L TLDL++N+L  +P
Sbjct: 494 QTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 279 DMLGNLINLTRLRLSYNRL 297
             +G L NL  L L  N+ 
Sbjct: 554 TEIGQLQNLQWLYLQNNQF 572


>gi|417761949|ref|ZP_12409946.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776878|ref|ZP_12424710.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672964|ref|ZP_13234294.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942211|gb|EKN87831.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573374|gb|EKQ36424.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580071|gb|EKQ47902.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 597

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 169/507 (33%), Positives = 248/507 (48%), Gaps = 54/507 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  + +L +L+EL L  N L  LP +IG + NL  L L +N L + P  
Sbjct: 55  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAV 114

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L  LDL  N+L  LP  + +L +L+ L L  N++ T   +I  L NL  L + +
Sbjct: 115 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 174

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL TLDL  N    LPKEIG    L TL+L  N+L  +P  +G L 
Sbjct: 175 NRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQ 234

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  NRL   P+ + +  +L         L++LP   +  L ++  + L  N+ T
Sbjct: 235 NLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKK-MGQLQNLQTLNLVNNRLT 293

Query: 346 AYPSGGPTQFTSVYSINF--------EHNQIDKI-------------------------- 371
            +P     Q  ++  +          E  +I K+                          
Sbjct: 294 VFPK-EIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEE 352

Query: 372 PYGIFS-----------------RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
           P  +F                  + +NL  +N+ D   ++LP ++     L  L LG N 
Sbjct: 353 PLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNG 412

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +  +  +I  L NLE L L  N L++LP  IG LR L+ L L +N L+  P EI  LK+L
Sbjct: 413 LKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKL 472

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           Q+L L  NQ  + P+ IG L NL  L++  N L ++P EI  L+NL  L LNDN     +
Sbjct: 473 QKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQ-FTVL 531

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEI 561
           P E+     LQ + L N  L+ +P+EI
Sbjct: 532 PKEIGKLKKLQTLDLRNNQLTTLPTEI 558



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 161/459 (35%), Positives = 244/459 (53%), Gaps = 16/459 (3%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS++ +  LP  + +L +L++L LY NKL + P +IG + NL  L L+EN LT+LP  
Sbjct: 124 LDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE 183

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ LDL+ N+   LP  + +L +L+ L L  N++ T+  +I  L NL  L +R+
Sbjct: 184 IGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRN 243

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++   P E+G+L+NL  L    N L  LPK++G    L TL+L +N L   P  +G L 
Sbjct: 244 NRLTVFPKEIGQLQNLQMLCSPENRLTALPKKMGQLQNLQTLNLVNNRLTVFPKEIGQLQ 303

Query: 286 NLTRLRLSYNRLESVPE--TLSKCVHLNEFNVEGCALSSLPDGLLSSLT-------SINN 336
           NL  L L  N L S+ E   + K    +  ++   A     +G+  +L         +  
Sbjct: 304 NLQDLELLMNPL-SLKERKRIQKLFPDSNLDLREVA----ENGVYRNLNLAQEEPLKVFE 358

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           ++L    F+        +F ++  +N        +P  I SR KNL  + +  N L ++P
Sbjct: 359 LSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKNIP 417

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  LNL  N++ +L ++I  L NL+ L L  N LK  P+ I  L+KL+ LDL
Sbjct: 418 SEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDL 477

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+  + P EIG L+ LQ L LQ NQL +LP  I  L NL  L + +N    +P+EIG 
Sbjct: 478 SVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGK 537

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           L+ L TL L +N  L  +P E+    NLQ + L N   S
Sbjct: 538 LKKLQTLDLRNNQ-LTTLPTEIGQLQNLQWLYLQNNQFS 575



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 150/442 (33%), Positives = 239/442 (54%), Gaps = 33/442 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L L K+ +T  P  + +L +L++L+L  N+L +LP +IG + NL  L L +N  T
Sbjct: 142 QNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFT 201

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L+L  N+L  LP+ + +L +L+ LYLR NR+     +I  L NL M
Sbjct: 202 ILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQM 261

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL------ 274
           L   +N++  LP ++G+L+NL TL+L +N L   PKEIG    L  L+L  N L      
Sbjct: 262 LCSPENRLTALPKKMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERK 321

Query: 275 ----------VNIPDMLGNLI----NLTR--------LRLSYNRL-ESVPETLSKCVHLN 311
                     +++ ++  N +    NL +        L L Y    +S P+ + K  +L 
Sbjct: 322 RIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLR 381

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
             N+  C  S+LP  + S L ++  + L  N     PS    Q  ++ ++N E N+++++
Sbjct: 382 GLNLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKNIPSE-IGQLKNLEALNLEANELERL 439

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + +NL K+++  N L   P ++     L +L+L  NQ +   ++I  L NL+ L
Sbjct: 440 PKEI-GQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTL 498

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  LP+ I  L+ L+ LDL +N+   LP EIG LK+LQ L L++NQL +LP  I
Sbjct: 499 NLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 558

Query: 492 GHLTNLSYLSVGENNLQSIPEE 513
           G L NL +L + +NN  S  E+
Sbjct: 559 GQLQNLQWLYL-QNNQFSFEEQ 579



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 140/452 (30%), Positives = 218/452 (48%), Gaps = 39/452 (8%)

Query: 145 YVTNLTCLGLAE------NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL 198
           ++  L+C   AE       +   L  +L N   +RVL+L   KL  LP  + +L +L+ L
Sbjct: 19  FLITLSCEIQAEAPEDEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQEL 78

Query: 199 YLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
            L++N +  +  +I  L NL  L +RDN++   P  + EL+ L +LDL+ N L  LP EI
Sbjct: 79  NLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEI 138

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
           G    L  L L  N+L   P  +G L NL +L LS NRL ++P+ + +  +L   +++  
Sbjct: 139 GRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN 198

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
             + LP   +  L ++  + LS N+    P     Q  ++  +   +N++   P  I  +
Sbjct: 199 QFTILPKE-IGQLQNLQTLNLSDNQLATLPV-EIGQLQNLQELYLRNNRLTVFPKEI-GQ 255

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
            +NL  +   +N LT+LP  +G    L  LNL  N+++   ++I  L NL+ L L  N L
Sbjct: 256 LQNLQMLCSPENRLTALPKKMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPL 315

Query: 439 ---------KKLPSSIGNLRK-----------------LKCLDLE---ENKLESLPNEIG 469
                    K  P S  +LR+                 LK  +L    ++  +S P  I 
Sbjct: 316 SLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVIL 375

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
             + L+ L L      +LP+ I  L NL YL++G N L++IP EIG L+NL  L L  N 
Sbjct: 376 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 435

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L  +P E+    NLQ +SL    L   P+EI
Sbjct: 436 -LERLPKEIGQLRNLQKLSLHQNTLKIFPAEI 466



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 107/199 (53%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  N+  L+L     + LP  + +L +L+ L L  N L ++PS+IG + NL  L L  N 
Sbjct: 376 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 435

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP  +  L+ L+ L L  N L   P  + +L  L+ L L  N+  T   +I  L NL
Sbjct: 436 LERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENL 495

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L+++ N++  LP E+ +LKNL  LDL  N    LPKEIG    L TLDL++N+L  +P
Sbjct: 496 QTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 555

Query: 279 DMLGNLINLTRLRLSYNRL 297
             +G L NL  L L  N+ 
Sbjct: 556 TEIGQLQNLQWLYLQNNQF 574


>gi|386392500|ref|ZP_10077281.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
 gi|385733378|gb|EIG53576.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
          Length = 1279

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 154/457 (33%), Positives = 242/457 (52%), Gaps = 4/457 (0%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +LD+S + +T LP S+ +L+ L+ L + G  LA+LP  IG +TNL  L ++  SL +LPD
Sbjct: 178 HLDVSSTGLTSLPDSIGQLSMLKHLDVSGTDLATLPDSIGQLTNLKHLDVSSTSLNTLPD 237

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
           S+  L  L+ LD+    L  LP  + +L+SL+ L +   R++ +   I  LS+L  L + 
Sbjct: 238 SIGQLSSLQHLDVSGTSLQTLPDSIGQLSSLQHLDVSGTRLQILPDSIVQLSSLQHLDVS 297

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           D  I  LP  +G+L NL  LD++   L  LP  IG  + L  L++    L  +P+ +  L
Sbjct: 298 DTSINNLPDSIGQLSNLQHLDVSDTSLNTLPDSIGQLSNLQHLEVSDASLNTLPETIWRL 357

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
            +L  L LS   L ++PE L +   L + N+ G  L++LP+  +  L S+ ++ LS    
Sbjct: 358 SSLQDLNLSGTGLTTLPEALCQLSSLQDLNLSGTGLTTLPEA-ICQLNSLQDLNLSGTGL 416

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
           T  P     Q  S+  +N     +  +P  I  +  +L  +N+    LT+LP  +     
Sbjct: 417 TTLPE-AICQLNSLQDLNLSGTGLTTLPEAI-CQLNSLQDLNLSGTGLTTLPGAICQLNS 474

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L +LNL    ++ L E I  L NL  L+ SN  L  LP ++G L  L+ L++    L +L
Sbjct: 475 LQDLNLSGTGLTTLPETIGQLTNLNNLMASNTALTTLPDTLGQLSNLEFLNISNTSLVTL 534

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P+ IG L  LQ L +    LV+LP +IG LT+L  L+V    L S+PE IG L NL  L 
Sbjct: 535 PDSIGLLSHLQILFVSDTDLVTLPESIGQLTSLEILNVSNTGLTSLPESIGRLTNLQILN 594

Query: 525 LNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           ++ NT L ++P  +    +L  +++ N  L+ +P  I
Sbjct: 595 VS-NTDLTSLPESIGQLKSLIKLNVSNTGLTSLPMSI 630



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 233/470 (49%), Gaps = 5/470 (1%)

Query: 93  KEFLR-CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTC 151
           +EFL   K+E    LDLS   ++ LP  +  LT+L+ L +  N +  LP  +  +T L  
Sbjct: 27  REFLTLAKQEKWSCLDLSALELSFLPLDLPPLTNLKSLTIASNPITILPKWLECLTGLET 86

Query: 152 LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD 211
           L ++  SL  LP+ +  L  L+ L +    L  LP  + +L++L+ L + F+    +   
Sbjct: 87  LNISGTSLKKLPEFIGELVGLQSLYVSRTALTTLPNSIRQLSNLRRLDISFSGFINLPDS 146

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
           I  + NL  L++    +  LP  +G+L  L  LD++   L  LP  IG  +ML  LD+  
Sbjct: 147 IGEMPNLQDLNVSSTDLTTLPASIGQLTRLQHLDVSSTGLTSLPDSIGQLSMLKHLDVSG 206

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
            +L  +PD +G L NL  L +S   L ++P+++ +   L   +V G +L +LPD  +  L
Sbjct: 207 TDLATLPDSIGQLTNLKHLDVSSTSLNTLPDSIGQLSSLQHLDVSGTSLQTLPDS-IGQL 265

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
           +S+ ++ +S  +    P     Q +S+  ++     I+ +P  I  +  NL  +++ D  
Sbjct: 266 SSLQHLDVSGTRLQILPD-SIVQLSSLQHLDVSDTSINNLPDSI-GQLSNLQHLDVSDTS 323

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           L +LP  +G    L  L +    ++ L E I  L +L+ L LS   L  LP ++  L  L
Sbjct: 324 LNTLPDSIGQLSNLQHLEVSDASLNTLPETIWRLSSLQDLNLSGTGLTTLPEALCQLSSL 383

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           + L+L    L +LP  I  L  LQ L L    L +LP AI  L +L  L++    L ++P
Sbjct: 384 QDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTLP 443

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           E I  L +L  L L+  T L  +P  +   ++LQ ++L    L+ +P  I
Sbjct: 444 EAICQLNSLQDLNLS-GTGLTTLPGAICQLNSLQDLNLSGTGLTTLPETI 492



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 162/323 (50%), Gaps = 7/323 (2%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +LD+S +S+  LP S+ +L++L+ L +    L +LP  I  +++L  L L+   LT+
Sbjct: 313 NLQHLDVSDTSLNTLPDSIGQLSNLQHLEVSDASLNTLPETIWRLSSLQDLNLSGTGLTT 372

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP++L  L  L+ L+L    L  LP  + +L SL+ L L    + T+   I  L++L  L
Sbjct: 373 LPEALCQLSSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTLPEAICQLNSLQDL 432

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++    +  LP  + +L +L  L+L+   L  LP  I     L  L+L    L  +P+ +
Sbjct: 433 NLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTLPGAICQLNSLQDLNLSGTGLTTLPETI 492

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITL 339
           G L NL  L  S   L ++P+TL +  +L   N+   +L +LPD  GLLS L     + +
Sbjct: 493 GQLTNLNNLMASNTALTTLPDTLGQLSNLEFLNISNTSLVTLPDSIGLLSHL---QILFV 549

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           S       P     Q TS+  +N  +  +  +P  I  R  NL  +N+ +  LTSLP  +
Sbjct: 550 SDTDLVTLPES-IGQLTSLEILNVSNTGLTSLPESI-GRLTNLQILNVSNTDLTSLPESI 607

Query: 400 GTWVGLTELNLGTNQISKLSEDI 422
           G    L +LN+    ++ L   I
Sbjct: 608 GQLKSLIKLNVSNTGLTSLPMSI 630



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 136/262 (51%), Gaps = 8/262 (3%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C+  ++ +L+LS + +T LP ++ +L  L++L L G  L +LP  I  + +L  L L+  
Sbjct: 424 CQLNSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTLPGAICQLNSLQDLNLSGT 483

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            LT+LP+++  L  L  L   +  L  LP  + +L++L+ L +    + T+   I  LS+
Sbjct: 484 GLTTLPETIGQLTNLNNLMASNTALTTLPDTLGQLSNLEFLNISNTSLVTLPDSIGLLSH 543

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L +L + D  +  LP  +G+L +L  L++++  L  LP+ IG  T L  L++ + +L ++
Sbjct: 544 LQILFVSDTDLVTLPESIGQLTSLEILNVSNTGLTSLPESIGRLTNLQILNVSNTDLTSL 603

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL--------SSLPDGLLS 329
           P+ +G L +L +L +S   L S+P ++ + + L +  V    L        SS P+ LLS
Sbjct: 604 PESIGQLKSLIKLNVSNTGLTSLPMSIRQLLLLRQLTVTATKLPIPPEIIESSDPEKLLS 663

Query: 330 SLTSINNITLSRNKFTAYPSGG 351
                    L+  K      GG
Sbjct: 664 YFYKKREEQLNEAKLLLVGQGG 685


>gi|418744843|ref|ZP_13301188.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794174|gb|EKR92084.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 511

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 164/461 (35%), Positives = 249/461 (54%), Gaps = 27/461 (5%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS + +  LP  + KL +LE+L L  N+LA L  +IG +  L  L L  N L S
Sbjct: 39  NVRILDLSDNLLITLPNEIGKLENLEKLNLVNNQLAVLVQEIGTLQKLEWLSLKNNRLES 98

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP+ +  L++L  L+L +N+L  L   +  L  L+ L L  N++  +  +I  L  L  L
Sbjct: 99  LPNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQEIGKLQKLEKL 158

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + DN++  LP E+G+L++L  L L +N L+ LPKEI     L  L L  N+   +P  +
Sbjct: 159 DLSDNQLATLPNEIGQLESLQYLSLVNNRLKTLPKEIWKLQKLKRLYLGDNQFRTLPKEI 218

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L +S N+L ++P  + K  +L    ++   L+ LP   +  L +++++ LS 
Sbjct: 219 DQLQNLEDLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQE-IGQLENLDSLILSN 277

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P               E   + K+ Y           +N+ +N L +LP ++GT
Sbjct: 278 NQLTTLPQ--------------EIGTLQKLQY-----------LNLSNNQLRTLPQEIGT 312

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  LNL  NQ++ L ++I  L NLE L LSNN LK LP  I  L++L+ L LE   L
Sbjct: 313 LQELEWLNLEHNQLAALPQEIDQLQNLEDLNLSNNRLKTLPKGIWKLQRLEWLYLEHAHL 372

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            +LPNEIG L++LQRL L +N+L +LP+ I  L  L +L +  N L S+P+EI  L+NL 
Sbjct: 373 TTLPNEIGTLQKLQRLFLSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEIDQLQNLE 432

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
            L L++N  L  +P E+    +L+ + L   P +  P EIV
Sbjct: 433 YLDLSNNQ-LRTLPNEIGQLQSLEDLDLSGNPFTTFPQEIV 472



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 137/398 (34%), Positives = 223/398 (56%), Gaps = 4/398 (1%)

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           D+L N   +R+LDL  N L  LP  + KL +L+ L L  N++  +  +I  L  L  LS+
Sbjct: 32  DALKNPMNVRILDLSDNLLITLPNEIGKLENLEKLNLVNNQLAVLVQEIGTLQKLEWLSL 91

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
           ++N++  LP ++G+L+ L  L+L +N L  L +EIG    L  L L++N+L  +P  +G 
Sbjct: 92  KNNRLESLPNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQEIGK 151

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L  L +L LS N+L ++P  + +   L   ++    L +LP  +   L  +  + L  N+
Sbjct: 152 LQKLEKLDLSDNQLATLPNEIGQLESLQYLSLVNNRLKTLPKEIW-KLQKLKRLYLGDNQ 210

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
           F   P     Q  ++  ++  +NQ+  +P  I+ + +NL  + + DN LT LP ++G   
Sbjct: 211 FRTLPK-EIDQLQNLEDLDVSNNQLVTLPNEIW-KLQNLKWLYLDDNQLTVLPQEIGQLE 268

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            L  L L  NQ++ L ++I  L  L+ L LSNN L+ LP  IG L++L+ L+LE N+L +
Sbjct: 269 NLDSLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAA 328

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           LP EI  L+ L+ L L +N+L +LP+ I  L  L +L +   +L ++P EIGTL+ L  L
Sbjct: 329 LPQEIDQLQNLEDLNLSNNRLKTLPKGIWKLQRLEWLYLEHAHLTTLPNEIGTLQKLQRL 388

Query: 524 YLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +L++N  L  +P E+     L+ + L N  L  +P EI
Sbjct: 389 FLSNNR-LKTLPKEIWKLRKLEWLYLKNNKLGSLPKEI 425



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 89/144 (61%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
            S+ ++N +N+ +L LS+NLL  LP+ IG L  L+ L+L  N+L  L  EIG L++L+ L
Sbjct: 30  FSDALKNPMNVRILDLSDNLLITLPNEIGKLENLEKLNLVNNQLAVLVQEIGTLQKLEWL 89

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L++N+L SLP  IG L  L +L++  N L  + +EIGTL+ L  L L +N  L  +P E
Sbjct: 90  SLKNNRLESLPNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSL-ENNQLTVLPQE 148

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +     L+ + L +  L+ +P+EI
Sbjct: 149 IGKLQKLEKLDLSDNQLATLPNEI 172


>gi|220907479|ref|YP_002482790.1| hypothetical protein Cyan7425_2066 [Cyanothece sp. PCC 7425]
 gi|219864090|gb|ACL44429.1| leucine-rich repeat protein [Cyanothece sp. PCC 7425]
          Length = 508

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 161/465 (34%), Positives = 246/465 (52%), Gaps = 15/465 (3%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS + +T LP  +  LT L +L L+ N L++LP  I  +T L  L L EN LT+LP++
Sbjct: 46  LDLSNNYLTTLPEEISALTQLRDLDLFSNSLSALPLGICSLTQLEVLDLIENQLTNLPEA 105

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           ++ L QL+ LDL +N    LP+V+  L  L++L L  N++  +  +I  L +L  L + +
Sbjct: 106 ISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGLHANKLTKLPAEIGCLVHLKELDLSN 165

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N   +LP  +  L  L TLDL+ NH  +LP+ I     L  LDL +N+L  IP ++ +L 
Sbjct: 166 NAFTDLPVAIANLNQLQTLDLSRNHFTDLPEAINGLAHLCKLDLSYNKLTAIPAVISSLS 225

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L  N++  +PE +  C+ L E ++    L +L    + SLT++  + LS+N+ +
Sbjct: 226 QLQTLDLCANQITELPELIGSCIELQELSLSRNLLINLSAA-IGSLTNLKVLDLSQNQLS 284

Query: 346 AYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
             P   G  TQ   +Y    E N++  +P  I     NL   ++  N LT LP  +G  +
Sbjct: 285 HLPKSIGYLTQLQKLY---IERNKLITLPESI-GGLSNLQTFHLYRNQLTILPESIGDLI 340

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP-------SSIGNLRKLKCLDL 456
            L EL    NQ++ L   I+ L  LE L LS N L  LP        ++ +L +L  L+L
Sbjct: 341 QLRELFAYQNQLTNLPGTIRFLTRLEKLNLSGNQLATLPEGLTVLCEALSSLLQLHYLNL 400

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N++  LP  IG L +L+ L+L  N L  LP +IG LT L +L V  N L  +PE I  
Sbjct: 401 SHNQIAQLPEAIGALTQLKELVLVCNHLKDLPASIGSLTQLQFLYVSHNPLTHLPETING 460

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L  L L  N  L+++P  +A  + L+ + L     + +P+ I
Sbjct: 461 LSQLQKLNLEHNH-LSDLPAAIAALTLLKELILSENKFTVLPTAI 504



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 166/485 (34%), Positives = 255/485 (52%), Gaps = 17/485 (3%)

Query: 87  ADLNIEKEF-LRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGY 145
           A+  IE+ + L+  E  + NL L     T LP ++  LT L++L L  N L +LP +I  
Sbjct: 8   AERRIEEAWQLQATELTLRNLGL-----TELPTTIGTLTQLQKLDLSNNYLTTLPEEISA 62

Query: 146 VTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRI 205
           +T L  L L  NSL++LP  + +L QL VLDL  N+L  LP  +  LT LK L L  N  
Sbjct: 63  LTQLRDLDLFSNSLSALPLGICSLTQLEVLDLIENQLTNLPEAISCLTQLKKLDLSNNHF 122

Query: 206 KTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
            ++   I  L+ L +L +  NK+ +LP E+G L +L  LDL++N   +LP  I N   L 
Sbjct: 123 TSLPVVIGDLAQLQVLGLHANKLTKLPAEIGCLVHLKELDLSNNAFTDLPVAIANLNQLQ 182

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
           TLDL  N   ++P+ +  L +L +L LSYN+L ++P  +S    L   ++    ++ LP+
Sbjct: 183 TLDLSRNHFTDLPEAINGLAHLCKLDLSYNKLTAIPAVISSLSQLQTLDLCANQITELPE 242

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
            L+ S   +  ++LSRN      S      T++  ++   NQ+  +P  I      L K+
Sbjct: 243 -LIGSCIELQELSLSRNLLINL-SAAIGSLTNLKVLDLSQNQLSHLPKSI-GYLTQLQKL 299

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
            ++ N L +LP  +G    L   +L  NQ++ L E I +L+ L  L    N L  LP +I
Sbjct: 300 YIERNKLITLPESIGGLSNLQTFHLYRNQLTILPESIGDLIQLRELFAYQNQLTNLPGTI 359

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKE-------LQRLILQSNQLVSLPRAIGHLTNLS 498
             L +L+ L+L  N+L +LP  +  L E       L  L L  NQ+  LP AIG LT L 
Sbjct: 360 RFLTRLEKLNLSGNQLATLPEGLTVLCEALSSLLQLHYLNLSHNQIAQLPEAIGALTQLK 419

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N+L+ +P  IG+L  L  LY++ N  L ++P  +   S LQ ++L++  LS +P
Sbjct: 420 ELVLVCNHLKDLPASIGSLTQLQFLYVSHNP-LTHLPETINGLSQLQKLNLEHNHLSDLP 478

Query: 559 SEIVV 563
           + I  
Sbjct: 479 AAIAA 483



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 152/421 (36%), Positives = 219/421 (52%), Gaps = 14/421 (3%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL ++ +T+LP ++  LT L++L L  N   SLP  IG +  L  LGL  N LT LP  
Sbjct: 92  LDLIENQLTNLPEAISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGLHANKLTKLPAE 151

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L+ LDL +N   +LP+ +  L  L+ L L  N    +   I  L++L  L +  
Sbjct: 152 IGCLVHLKELDLSNNAFTDLPVAIANLNQLQTLDLSRNHFTDLPEAINGLAHLCKLDLSY 211

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+  +P  +  L  L TLDL  N + ELP+ IG+C  L  L L  N L+N+   +G+L 
Sbjct: 212 NKLTAIPAVISSLSQLQTLDLCANQITELPELIGSCIELQELSLSRNLLINLSAAIGSLT 271

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L LS N+L  +P+++     L +  +E   L +LP+  +  L+++    L RN+ T
Sbjct: 272 NLKVLDLSQNQLSHLPKSIGYLTQLQKLYIERNKLITLPES-IGGLSNLQTFHLYRNQLT 330

Query: 346 AYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD----- 398
             P   G   Q   +++     NQ+  +P G       L K+N+  N L +LP       
Sbjct: 331 ILPESIGDLIQLRELFAY---QNQLTNLP-GTIRFLTRLEKLNLSGNQLATLPEGLTVLC 386

Query: 399 --LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             L + + L  LNL  NQI++L E I  L  L+ LVL  N LK LP+SIG+L +L+ L +
Sbjct: 387 EALSSLLQLHYLNLSHNQIAQLPEAIGALTQLKELVLVCNHLKDLPASIGSLTQLQFLYV 446

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N L  LP  I  L +LQ+L L+ N L  LP AI  LT L  L + EN    +P  IG 
Sbjct: 447 SHNPLTHLPETINGLSQLQKLNLEHNHLSDLPAAIAALTLLKELILSENKFTVLPTAIGA 506

Query: 517 L 517
           L
Sbjct: 507 L 507



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/397 (35%), Positives = 206/397 (51%), Gaps = 10/397 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS +  T LP  +  L  L+ L L+ NKL  LP++IG + +L  L L+ N+ T LP +
Sbjct: 115 LDLSNNHFTSLPVVIGDLAQLQVLGLHANKLTKLPAEIGCLVHLKELDLSNNAFTDLPVA 174

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +ANL QL+ LDL  N   +LP  +  L  L  L L +N++  +   I  LS L  L +  
Sbjct: 175 IANLNQLQTLDLSRNHFTDLPEAINGLAHLCKLDLSYNKLTAIPAVISSLSQLQTLDLCA 234

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I ELP  +G    L  L L+ N L  L   IG+ T L  LDL  N+L ++P  +G L 
Sbjct: 235 NQITELPELIGSCIELQELSLSRNLLINLSAAIGSLTNLKVLDLSQNQLSHLPKSIGYLT 294

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L +L +  N+L ++PE++    +L  F++    L+ LP+ +   L  +  +   +N+ T
Sbjct: 295 QLQKLYIERNKLITLPESIGGLSNLQTFHLYRNQLTILPESI-GDLIQLRELFAYQNQLT 353

Query: 346 AYPSGGPTQF-TSVYSINFEHNQIDKIPYGIFSRAKNLSKV------NMKDNLLTSLPLD 398
             P  G  +F T +  +N   NQ+  +P G+    + LS +      N+  N +  LP  
Sbjct: 354 NLP--GTIRFLTRLEKLNLSGNQLATLPEGLTVLCEALSSLLQLHYLNLSHNQIAQLPEA 411

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L EL L  N +  L   I +L  L+ L +S+N L  LP +I  L +L+ L+LE 
Sbjct: 412 IGALTQLKELVLVCNHLKDLPASIGSLTQLQFLYVSHNPLTHLPETINGLSQLQKLNLEH 471

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N L  LP  I  L  L+ LIL  N+   LP AIG LT
Sbjct: 472 NHLSDLPAAIAALTLLKELILSENKFTVLPTAIGALT 508


>gi|124010573|ref|ZP_01695196.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
 gi|123982251|gb|EAY23831.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
          Length = 519

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 166/491 (33%), Positives = 241/491 (49%), Gaps = 63/491 (12%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           +  LDLS   +  +  ++   T L+EL L  ++L S+ S++  +TNL  + L+ N L  L
Sbjct: 37  VYRLDLSGQKLKAISRNIHVFTRLQELKLAQDQLDSINSEVTALTNLQIVDLSHNQLGKL 96

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+ L  L+ L  L+L HN++ ELP  + +L  LK L +  N IK +  ++  LS L+ L 
Sbjct: 97  PEFLFKLRHLHTLNLAHNQIKELPTGIARLNKLKYLNIVGNPIKKLPAELTQLSQLATLK 156

Query: 223 M------------RDNKI----------------------RELPPE-LGELKNLVTLDLA 247
                        + NK+                      R++P + L +LKNL  L L 
Sbjct: 157 ADKKLLVQWEMLRKKNKLFTNLEEALKTPAQVYKLELHSLRQIPVQKLKKLKNLEVLKLN 216

Query: 248 HNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKC 307
           +N L  LPKE+G+   L  L LQ+N L  +P  +G+L  L +L L  NR+E +P+ L K 
Sbjct: 217 NNALRTLPKELGSLKSLKELHLQNNLLKTVPKEIGDLQQLKKLNLKMNRVEGLPKELGKL 276

Query: 308 VHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQ 367
             L + ++    L ++P  L   LT++  + LSRN+    P                   
Sbjct: 277 KQLEQLDLYNNRLKTVPKEL-GKLTALKKLDLSRNRLQNLPQE----------------- 318

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
                    + A+ L K+N++ N LT LP +LG    L  LNL  N++  L E +  L N
Sbjct: 319 --------LTNAQALEKLNLRGNALTQLPKNLGNLQQLKRLNLDANRLVGLPESLGKLKN 370

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           LE L L  N LKKLP S+G L KLK L L +N L  LP  IG L+ L+ L    N L  L
Sbjct: 371 LESLDLRENALKKLPESLGGLEKLKNLQLRKNALTKLPESIGKLQNLESLDSWGNALEGL 430

Query: 488 PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ-- 545
           P +IG L  L  +++  N L  +PE +G LENL TL L +N+ L  +P  L    NLQ  
Sbjct: 431 PESIGGLKKLKKMNLAYNQLTELPESLGKLENLQTLNLWNNSTLQKLPKSLGNLKNLQSF 490

Query: 546 IMSLDNCPLSQ 556
            M  D  PL +
Sbjct: 491 KMQFDKLPLGE 501



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 144/445 (32%), Positives = 213/445 (47%), Gaps = 69/445 (15%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +DLS + +  LP  + KL HL  L L  N++  LP+ I  +  L  L +  N +  LP  
Sbjct: 86  VDLSHNQLGKLPEFLFKLRHLHTLNLAHNQIKELPTGIARLNKLKYLNIVGNPIKKLPAE 145

Query: 166 LANLQQLRVLDL------------RHNKLN-------ELPMVVY---------------- 190
           L  L QL  L              + NKL        + P  VY                
Sbjct: 146 LTQLSQLATLKADKKLLVQWEMLRKKNKLFTNLEEALKTPAQVYKLELHSLRQIPVQKLK 205

Query: 191 KLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
           KL +L++L L  N ++T+  ++  L +L  L +++N ++ +P E+G+L+ L  L+L  N 
Sbjct: 206 KLKNLEVLKLNNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEIGDLQQLKKLNLKMNR 265

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           +E LPKE+G    L  LDL +N L  +P  LG L  L +L LS NRL+++P+ L+    L
Sbjct: 266 VEGLPKELGKLKQLEQLDLYNNRLKTVPKELGKLTALKKLDLSRNRLQNLPQELTNAQAL 325

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK 370
            + N+ G AL+ LP   L +L  +  + L  N+    P                      
Sbjct: 326 EKLNLRGNALTQLPKN-LGNLQQLKRLNLDANRLVGLPES-------------------- 364

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
                  + KNL  +++++N L  LP  LG    L  L L  N ++KL E I  L NLE 
Sbjct: 365 -----LGKLKNLESLDLRENALKKLPESLGGLEKLKNLQLRKNALTKLPESIGKLQNLES 419

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ-LVSLPR 489
           L    N L+ LP SIG L+KLK ++L  N+L  LP  +G L+ LQ L L +N  L  LP+
Sbjct: 420 LDSWGNALEGLPESIGGLKKLKKMNLAYNQLTELPESLGKLENLQTLNLWNNSTLQKLPK 479

Query: 490 AIGHLTNLS-------YLSVGENNL 507
           ++G+L NL         L +GE NL
Sbjct: 480 SLGNLKNLQSFKMQFDKLPLGERNL 504



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 189/391 (48%), Gaps = 62/391 (15%)

Query: 85  IQAD--LNIEKEFLRCKEENILNLD-----------LSKSSITHLP-PSVEKLTHLEELY 130
           ++AD  L ++ E LR K +   NL+           L   S+  +P   ++KL +LE L 
Sbjct: 155 LKADKKLLVQWEMLRKKNKLFTNLEEALKTPAQVYKLELHSLRQIPVQKLKKLKNLEVLK 214

Query: 131 LYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVY 190
           L  N L +LP ++G + +L  L L  N L ++P  + +LQQL+ L+L+ N++  LP  + 
Sbjct: 215 LNNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEIGDLQQLKKLNLKMNRVEGLPKELG 274

Query: 191 KLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
           KL  L+ L L  NR+KTV  ++  L+ L  L +  N+++ LP EL   + L  L+L  N 
Sbjct: 275 KLKQLEQLDLYNNRLKTVPKELGKLTALKKLDLSRNRLQNLPQELTNAQALEKLNLRGNA 334

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           L +LPK +GN   L  L+L  N LV +P+ LG L NL  L L  N L+ +PE+L     L
Sbjct: 335 LTQLPKNLGNLQQLKRLNLDANRLVGLPESLGKLKNLESLDLRENALKKLPESLGGLEKL 394

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK 370
               +   AL+ LP+ +                          +  ++ S++   N ++ 
Sbjct: 395 KNLQLRKNALTKLPESI-------------------------GKLQNLESLDSWGNALEG 429

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           +P  I    K L K+N+  N LT LP  LG    L  LNL                    
Sbjct: 430 LPESIGG-LKKLKKMNLAYNQLTELPESLGKLENLQTLNLW------------------- 469

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +N+ L+KLP S+GNL+ L+   ++ +KL
Sbjct: 470 ---NNSTLQKLPKSLGNLKNLQSFKMQFDKL 497



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 14/185 (7%)

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
           K+ + TS    L     +  L+L   ++  +S +I     L+ L L+ + L  + S +  
Sbjct: 20  KEKVYTSWQRALKDPTKVYRLDLSGQKLKAISRNIHVFTRLQELKLAQDQLDSINSEVTA 79

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           L  L+ +DL  N+L  LP  +  L+ L  L L  NQ+  LP  I  L  L YL++  N +
Sbjct: 80  LTNLQIVDLSHNQLGKLPEFLFKLRHLHTLNLAHNQIKELPTGIARLNKLKYLNIVGNPI 139

Query: 508 QSIPEEIGTLENLHTLYLN------------DNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           + +P E+  L  L TL  +             N    N+  E AL +  Q+  L+   L 
Sbjct: 140 KKLPAELTQLSQLATLKADKKLLVQWEMLRKKNKLFTNL--EEALKTPAQVYKLELHSLR 197

Query: 556 QIPSE 560
           QIP +
Sbjct: 198 QIPVQ 202


>gi|418686505|ref|ZP_13247671.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410738938|gb|EKQ83670.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 469

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 147/404 (36%), Positives = 231/404 (57%), Gaps = 4/404 (0%)

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           + T L  +L N   +RVLDL   KL  LP  + +L +L++L L  N++ T+  +I  L N
Sbjct: 34  AYTDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKN 93

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L +L + +N++  LP E+G+LKNL  L+L +N L  LPKEIG    L  L+L +N+L  +
Sbjct: 94  LQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATL 153

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  +G L NL  L L  N+L ++PE + +  +     +    L++LP  +   L ++  +
Sbjct: 154 PKEIGQLKNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEI-GQLKNLREL 212

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            L+ N+FTA+P     Q  ++  +N   NQ+  +P  I  + +NL ++++  N L +L  
Sbjct: 213 YLNTNQFTAFPKE-IGQLKNLQQLNLYANQLKTLPNEI-GQLQNLRELHLSYNQLKTLSA 270

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++G    L  L+L  NQ+  L ++I  L NL+VL L+NN  K +P  IG L+ L+ LDL 
Sbjct: 271 EIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLG 330

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
            N+ +++  EIG LK LQ L L +NQL +L   IG L NL  LS+  N L ++P EI  L
Sbjct: 331 YNQFKTVSEEIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTTLPNEIRQL 390

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +NL  L+L+ N  L  +  E+    NL+ +SL +  L+ +P EI
Sbjct: 391 KNLRELHLSYNQ-LKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 433



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/409 (35%), Positives = 226/409 (55%), Gaps = 26/409 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + +L +L+ L L  N+LA+LP +IG + NL  L L  N L +LP  
Sbjct: 51  LDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VL+L +N+L  LP  + +L +L++L L  N++ T+  +I  L NL  L++  
Sbjct: 111 IGQLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQWLNLVT 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L+N  TL L+ N L  LPKEIG    L  L L  N+    P  +G L 
Sbjct: 171 NQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLK 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL +L L  N+L+++P  + +  +L E ++    L +L                      
Sbjct: 231 NLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTL---------------------- 268

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
              S    Q  ++  ++   NQ+  +P  I  + KNL  +++ +N   ++P ++G    L
Sbjct: 269 ---SAEIGQLQNLQVLDLNDNQLKTLPKEI-GQLKNLQVLDLNNNQFKTVPEEIGQLKNL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L+LG NQ   +SE+I  L NL++L L+NN LK L + IG L+ L+ L L  N+L +LP
Sbjct: 325 QVLDLGYNQFKTVSEEIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTTLP 384

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           NEI  LK L+ L L  NQL +L   IG L NL  LS+ +N L ++P+EI
Sbjct: 385 NEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 433



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 204/368 (55%), Gaps = 3/368 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L+ + +  LP  + +L +L+ L L  N+LA+LP +IG + NL  L L  N L 
Sbjct: 69  QNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLA 128

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L+VL+L +N+L  LP  + +L +L+ L L  N++ T+  +I  L N   
Sbjct: 129 TLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLTTLPEEIGQLQNFQT 188

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+LKNL  L L  N     PKEIG    L  L+L  N+L  +P+ 
Sbjct: 189 LVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNE 248

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LSYN+L+++   + +  +L   ++    L +LP   +  L ++  + L+
Sbjct: 249 IGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKE-IGQLKNLQVLDLN 307

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+F   P     Q  ++  ++  +NQ   +   I  + KNL  + + +N L +L  ++G
Sbjct: 308 NNQFKTVPE-EIGQLKNLQVLDLGYNQFKTVSEEI-GQLKNLQMLFLNNNQLKTLSAEIG 365

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  NQ++ L  +I+ L NL  L LS N LK L + IG L+ LK L L +N+
Sbjct: 366 QLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQ 425

Query: 461 LESLPNEI 468
           L +LP EI
Sbjct: 426 LTTLPKEI 433


>gi|45656720|ref|YP_000806.1| hypothetical protein LIC10829 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084297|ref|ZP_15545160.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102948|ref|ZP_15563550.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599956|gb|AAS69443.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367263|gb|EKP22649.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433197|gb|EKP77545.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 402

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 142/383 (37%), Positives = 223/383 (58%), Gaps = 3/383 (0%)

Query: 146 VTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRI 205
           + NL  L L +N LT LP  +  L+ LR L+L  N++  +P  + KL  L+ LYL  N++
Sbjct: 1   MKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQL 60

Query: 206 KTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
            T+  +I  L  L  L +  N++  LP E+G+LKNL +L+L++N ++ +PKEI     L 
Sbjct: 61  TTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQ 120

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
           +L L +N+L  +P  +G L NL  L LS NRL ++P+ + +  +L   ++    L++LP 
Sbjct: 121 SLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQ 180

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
            +   L ++  + L  N+ T  P+    Q  ++ ++N  +N++  +   I  + +NL  +
Sbjct: 181 EI-GHLQNLQELYLVSNQLTILPNE-IGQLKNLQTLNLRNNRLTTLSKEI-EQLQNLKSL 237

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           +++ N LT  P ++G    L  L+LG+NQ++ L E I  L NL+ L L +N L  LP  I
Sbjct: 238 DLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEI 297

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
             L+ L+ LDL  N+L++LP EI  LK LQ L L  NQL  LP+ IG L NL  L +  N
Sbjct: 298 KQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNN 357

Query: 506 NLQSIPEEIGTLENLHTLYLNDN 528
            L ++P+EIG L+NL  LYLN+N
Sbjct: 358 QLTTLPKEIGQLKNLQELYLNNN 380



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/413 (35%), Positives = 229/413 (55%), Gaps = 27/413 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L+K+ +T LP  + +L +L +L L  N++ ++P +I  +  L  L L  N LT
Sbjct: 2   KNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLT 61

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ+L+ L L  N+L  LP  + +L +LK L L +N+IKT+  +I+ L  L  
Sbjct: 62  TLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQS 121

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++  LP E+G+L+NL +LDL+ N L  LP+EIG    L +LDL  N L  +P  
Sbjct: 122 LGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE 181

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G+L NL  L L  N+L  +P  + +  +L   N+    L++L    +  L ++ ++ L 
Sbjct: 182 IGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKE-IEQLQNLKSLDLR 240

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T +P                             + KNL  +++  N LT+LP  +G
Sbjct: 241 SNQLTIFPKE-------------------------IGQLKNLQVLDLGSNQLTTLPEGIG 275

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L +NQ++ L ++I+ L NL++L LS N LK LP  I  L+ L+ L L  N+
Sbjct: 276 QLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLYLGYNQ 335

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L  LP EIG L+ L+ L L +NQL +LP+ IG L NL  L +  N L SI E+
Sbjct: 336 LTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQL-SIEEK 387



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/370 (36%), Positives = 213/370 (57%), Gaps = 4/370 (1%)

Query: 192 LTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHL 251
           + +L+ L L  N++  +  +I  L NL  L++  N+I+ +P E+ +L+ L +L L +N L
Sbjct: 1   MKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQL 60

Query: 252 EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN 311
             LP+EIG    L  L L  N+L  +P  +G L NL  L LSYN+++++P+ + K   L 
Sbjct: 61  TTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQ 120

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
              ++   L++LP  +   L ++ ++ LS N+ T  P     Q  ++ S++   N++  +
Sbjct: 121 SLGLDNNQLTTLPQEI-GQLQNLQSLDLSTNRLTTLPQE-IGQLQNLQSLDLSTNRLTTL 178

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I    +NL ++ +  N LT LP ++G    L  LNL  N+++ LS++I+ L NL+ L
Sbjct: 179 PQEI-GHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 237

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L +N L   P  IG L+ L+ LDL  N+L +LP  IG LK LQ L L SNQL +LP+ I
Sbjct: 238 DLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEI 297

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
             L NL  L +  N L+++P+EI  L+NL TLYL  N  L  +P E+    NL+++ L+N
Sbjct: 298 KQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLYLGYNQ-LTVLPKEIGQLQNLKVLFLNN 356

Query: 552 CPLSQIPSEI 561
             L+ +P EI
Sbjct: 357 NQLTTLPKEI 366


>gi|418726507|ref|ZP_13285118.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960417|gb|EKO24171.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 595

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 161/488 (32%), Positives = 249/488 (51%), Gaps = 29/488 (5%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + +T LP  +E+L +L+EL L  N+LA+ P+ I  +  L  L L+EN L 
Sbjct: 71  KNLQELNLKWNLLTVLPKEIEQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 130

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP+ +  LQ L+ L L  NKL   P  + +L +L+ L+L  NR+  +  +I  L NL  
Sbjct: 131 ILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQT 190

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L ++DN+   LP E+G+L+NL TL+L  N L  LP EIG    L  L L++N L   P  
Sbjct: 191 LDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKE 250

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L    NRL ++P+ + +  +L   N+    L+  P   +  L ++ ++ L 
Sbjct: 251 IGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKE-IGQLQNLQDLELL 309

Query: 341 RNKFT---------AYPSG------------------GPTQFTSVYSINFEHNQIDKIPY 373
            N F+          +P                       +   V+ ++ E+    +   
Sbjct: 310 MNPFSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFP 369

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
            +  + +NL  +N+ D   ++LP ++     L  L LG N +  +  +I  L NLE L L
Sbjct: 370 KVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNL 429

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
             N L++LP  IG LR L+ L L +N L+  P EI  LK+LQ+L L  NQ  +  + IG 
Sbjct: 430 EANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFLKEIGK 489

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L NL  L++  N L ++  EIG L+NL  L LNDN     +P E+     LQ + L N  
Sbjct: 490 LENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQ-FTVLPKEIGKLKKLQTLDLRNNQ 548

Query: 554 LSQIPSEI 561
           L+ +P+EI
Sbjct: 549 LTTLPTEI 556



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 161/459 (35%), Positives = 244/459 (53%), Gaps = 16/459 (3%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS++ +  LP  + +L +L++L LY NKL + P +IG + NL  L L+EN LT+LP  
Sbjct: 122 LDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE 181

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ LDL+ N+   LP  + +L +L+ L L+ N++ T+  +I  L NL  L +R+
Sbjct: 182 IGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN 241

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++   P E+G+L+NL  L    N L  LPKE+G    L TL+L +N L   P  +G L 
Sbjct: 242 NRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQ 301

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNE-FNVEGCALSSLPD-GLLSSLT-------SINN 336
           NL  L L  N     P +L +   + + F      L  + + G+  +L         +  
Sbjct: 302 NLQDLELLMN-----PFSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFE 356

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           ++L    F+        +F ++  +N        +P  I SR KNL  + +  N L ++P
Sbjct: 357 LSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKNIP 415

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  LNL  N++ +L ++I  L NL+ L L  N LK  P+ I  L+KL+ LDL
Sbjct: 416 SEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDL 475

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+  +   EIG L+ LQ L LQ NQL +L   IG L NL  L + +N    +P+EIG 
Sbjct: 476 SVNQFTTFLKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGK 535

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           L+ L TL L +N  L  +P E+    NLQ + L N  LS
Sbjct: 536 LKKLQTLDLRNNQ-LTTLPTEIGQLQNLQWLYLQNNQLS 573



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 151/436 (34%), Positives = 235/436 (53%), Gaps = 32/436 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L L K+ +T  P  + +L +L++L+L  N+L +LP +IG + NL  L L +N  T
Sbjct: 140 QNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFT 199

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ L+ L+L+ N+L  LP+ + +L +L+ LYLR NR+     +I  L NL M
Sbjct: 200 TLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQM 259

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN-----ELV 275
           L   +N++  LP E+G+L+NL TL+L +N L   PKEIG    L  L+L  N     E  
Sbjct: 260 LCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPFSLKERK 319

Query: 276 NIPDML--GNL-------------INLTR--------LRLSYNRL-ESVPETLSKCVHLN 311
            I  +    NL             +NL +        L L Y    +S P+ + K  +L 
Sbjct: 320 RIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLR 379

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
             N+  C  S+LP  + S L ++  + L  N     PS    Q  ++ ++N E N+++++
Sbjct: 380 GLNLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKNIPSE-IGQLKNLEALNLEANELERL 437

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + +NL K+++  N L   P ++     L +L+L  NQ +   ++I  L NL+ L
Sbjct: 438 PKEI-GQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFLKEIGKLENLQTL 496

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  L + IG L+ L+ LDL +N+   LP EIG LK+LQ L L++NQL +LP  I
Sbjct: 497 NLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556

Query: 492 GHLTNLSYLSVGENNL 507
           G L NL +L +  N L
Sbjct: 557 GQLQNLQWLYLQNNQL 572



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 134/430 (31%), Positives = 212/430 (49%), Gaps = 33/430 (7%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L  +L N   +RVL+L   KL  LP  + +L +L+ L L++N +  +  +I+ L NL  
Sbjct: 39  DLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIEQLENLQE 98

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +RDN++   P  + EL+ L +LDL+ N L  LP EIG    L  L L  N+L   P  
Sbjct: 99  LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 158

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL +L LS NRL ++P+ + +  +L   +++    ++LP   +  L ++  + L 
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKE-IGQLQNLQTLNLQ 217

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P     Q  ++  +   +N++   P  I  + +NL  +   +N LT+LP ++G
Sbjct: 218 DNQLATLPV-EIGQLQNLQELYLRNNRLTVFPKEI-GQLQNLQMLCSPENRLTALPKEMG 275

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN---------LLKKLPSSIGNLRK- 450
               L  LNL  N+++   ++I  L NL+ L L  N         + K  P S  +LR+ 
Sbjct: 276 QLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPFSLKERKRIQKLFPDSNLDLREV 335

Query: 451 ----------------LKCLDLE---ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
                           LK  +L    ++  +S P  I   + L+ L L      +LP+ I
Sbjct: 336 AENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEI 395

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
             L NL YL++G N L++IP EIG L+NL  L L  N  L  +P E+    NLQ +SL  
Sbjct: 396 SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE-LERLPKEIGQLRNLQKLSLHQ 454

Query: 552 CPLSQIPSEI 561
             L   P+EI
Sbjct: 455 NTLKIFPAEI 464



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 108/199 (54%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  N+  L+L     + LP  + +L +L+ L L  N L ++PS+IG + NL  L L  N 
Sbjct: 374 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 433

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP  +  L+ L+ L L  N L   P  + +L  L+ L L  N+  T   +I  L NL
Sbjct: 434 LERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFLKEIGKLENL 493

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L+++ N++  L  E+G+L+NL  LDL  N    LPKEIG    L TLDL++N+L  +P
Sbjct: 494 QTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 553

Query: 279 DMLGNLINLTRLRLSYNRL 297
             +G L NL  L L  N+L
Sbjct: 554 TEIGQLQNLQWLYLQNNQL 572



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N   ++ L+L   KL +LP EIG LK LQ L L+ N L  LP+ I  L NL 
Sbjct: 38  RDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIEQLENLQ 97

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L + +N L + P  I  L+ L +L L++N  +  +P E+    NLQ + L    L+  P
Sbjct: 98  ELDLRDNQLATFPAVIVELQKLESLDLSENRLI-ILPNEIGRLQNLQDLGLYKNKLTTFP 156

Query: 559 SEI 561
            EI
Sbjct: 157 KEI 159


>gi|455791564|gb|EMF43371.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 452

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/415 (36%), Positives = 228/415 (54%), Gaps = 26/415 (6%)

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
            + T L  +++    +  L L   KL  LP +IG + NL  L L+ NSLT+LP  +  L+
Sbjct: 35  GTYTDLAKALQNPLKVRTLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLE 94

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
            L+ LDL  N+L  LPM + +L +L+ L L  N++ T+  +I+ L NL  L +  N++  
Sbjct: 95  NLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTT 154

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+G+L+NL TL+L    L  LPKEIG    L TL+L  N+L  +P  +G L NL  L
Sbjct: 155 LPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEIL 214

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L  NR+ ++P+ + +  +L   ++    L++LP  +                       
Sbjct: 215 VLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEI----------------------- 251

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              Q  ++  ++   NQ+  +P  I  + +NL ++++  N LT+LP ++G    L EL L
Sbjct: 252 --GQLQNLQRLDLHQNQLTTLPKEI-GQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCL 308

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             NQ++ L ++I+ L NL VL L NN L  LP  +  L+ L+ L L  N+L +LP EIG 
Sbjct: 309 DENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQ 368

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
           L+ LQ L L SNQL +LP+ IG L NL  L + EN L + P+EI  L+NL  L+L
Sbjct: 369 LQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHL 423



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 147/396 (37%), Positives = 222/396 (56%), Gaps = 4/396 (1%)

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           T L  +L N  ++R LDLR+ KL  LP  + +L +L+ L L FN + T+  ++  L NL 
Sbjct: 38  TDLAKALQNPLKVRTLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQ 97

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L +  N++  LP E+G+LKNL  LDL  N L  LPKEI     L  LDL  N+L  +P 
Sbjct: 98  RLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPK 157

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +G L NL  L L   +L ++P+ + +  +L   N+    L++LP  +   L ++  + L
Sbjct: 158 EIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI-GELQNLEILVL 216

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
             N+ TA P     Q  ++  ++   NQ+  +P  I  + +NL ++++  N LT+LP ++
Sbjct: 217 RENRITALPKE-IGQLQNLQWLDLHQNQLTTLPKEI-GQLQNLQRLDLHQNQLTTLPKEI 274

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G    L  L+L  NQ++ L ++I  L NL+ L L  N L  LP  I  L+ L+ LDL+ N
Sbjct: 275 GQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNN 334

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L +LP E+  L+ LQ L L SN+L +LP+ IG L NL  L +  N L ++P+EIG L+N
Sbjct: 335 QLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQN 394

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           L  L L++N  L   P E+    NLQ + L   PLS
Sbjct: 395 LQELCLDENQ-LTTFPKEIRQLKNLQELHLYLNPLS 429



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 141/385 (36%), Positives = 211/385 (54%), Gaps = 26/385 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS +S+T LP  V +L +L+ L L+ N+LA+LP +IG + NL  L L  N LT+
Sbjct: 72  NLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTT 131

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L+ L+ LDL  N+L  LP  + +L +LK L L   ++ T+  +I  L NL  L
Sbjct: 132 LPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTL 191

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++ DN++  LP E+GEL+NL  L L  N +  LPKEIG    L  LDL  N+L  +P  +
Sbjct: 192 NLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEI 251

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL RL L  N+L ++P+ + +  +L   ++    L++LP   +  L ++  + L  
Sbjct: 252 GQLQNLQRLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKE-IGQLQNLQELCLDE 310

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P                             + +NL  +++ +N LT+LP ++  
Sbjct: 311 NQLTTLPKE-------------------------IEQLQNLRVLDLDNNQLTTLPKEVLR 345

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L LG+N++S L ++I  L NL+VL L +N L  LP  IG L+ L+ L L+EN+L
Sbjct: 346 LQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQL 405

Query: 462 ESLPNEIGFLKELQRLILQSNQLVS 486
            + P EI  LK LQ L L  N L S
Sbjct: 406 TTFPKEIRQLKNLQELHLYLNPLSS 430



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 139/404 (34%), Positives = 216/404 (53%), Gaps = 26/404 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL    +T LP  + +L +L+EL L  N L +LP ++G + NL  L L +N L +LP  
Sbjct: 53  LDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPME 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ LDL  NKL  LP  + +L +L+ L L  N++ T+  +I  L NL  L++  
Sbjct: 113 IGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIV 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
            ++  LP E+GEL+NL TL+L  N L  LPKEIG    L  L L+ N +  +P  +G L 
Sbjct: 173 TQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L ++P+ + +  +L   ++    L++LP  +                  
Sbjct: 233 NLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEI------------------ 274

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                   Q  ++  ++   NQ+  +P  I  + +NL ++ + +N LT+LP ++     L
Sbjct: 275 -------GQLQNLQRLDLHQNQLTTLPKEI-GQLQNLQELCLDENQLTTLPKEIEQLQNL 326

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L+L  NQ++ L +++  L +L+VL L +N L  LP  IG L+ L+ L L  N+L +LP
Sbjct: 327 RVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLP 386

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            EIG L+ LQ L L  NQL + P+ I  L NL  L +  N L S
Sbjct: 387 KEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 430



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/320 (37%), Positives = 175/320 (54%), Gaps = 27/320 (8%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLDL +  L  LPKEIG    L  LDL  N L  +P  +G L NL RL L  NRL ++P 
Sbjct: 52  TLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPM 111

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + +  +L E ++    L++LP  +   L ++  + L RN+ T  P              
Sbjct: 112 EIGQLKNLQELDLNSNKLTTLPKEI-RQLRNLQELDLHRNQLTTLPKE------------ 158

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
                          + +NL  +N+    LT+LP ++G    L  LNL  NQ++ L ++I
Sbjct: 159 -------------IGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI 205

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NLE+LVL  N +  LP  IG L+ L+ LDL +N+L +LP EIG L+ LQRL L  N
Sbjct: 206 GELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQN 265

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL +LP+ IG L NL  L + +N L ++P+EIG L+NL  L L++N  L  +P E+    
Sbjct: 266 QLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQ-LTTLPKEIEQLQ 324

Query: 543 NLQIMSLDNCPLSQIPSEIV 562
           NL+++ LDN  L+ +P E++
Sbjct: 325 NLRVLDLDNNQLTTLPKEVL 344



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/316 (35%), Positives = 178/316 (56%), Gaps = 3/316 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL+ + +T LP  + +L +L+EL L+ N+L +LP +IG + NL  L L    LT
Sbjct: 117 KNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLT 176

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ L+ L+L  N+L  LP  + +L +L+IL LR NRI  +  +I  L NL  
Sbjct: 177 TLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQW 236

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+L+NL  LDL  N L  LPKEIG    L  LDL  N+L  +P  
Sbjct: 237 LDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKE 296

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L ++P+ + +  +L   +++   L++LP  +L  L S+  + L 
Sbjct: 297 IGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVL-RLQSLQVLALG 355

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ +  P     Q  ++  +    NQ+  +P  I  + +NL ++ + +N LT+ P ++ 
Sbjct: 356 SNRLSTLPK-EIGQLQNLQVLGLISNQLTTLPKEI-GQLQNLQELCLDENQLTTFPKEIR 413

Query: 401 TWVGLTELNLGTNQIS 416
               L EL+L  N +S
Sbjct: 414 QLKNLQELHLYLNPLS 429


>gi|440798242|gb|ELR19310.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 641

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 167/476 (35%), Positives = 243/476 (51%), Gaps = 26/476 (5%)

Query: 107 DLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSL 166
           D  K S     PS  KLT LE+L       A+L         +    L    +T+LPD +
Sbjct: 172 DKRKGSARMPAPSQTKLT-LEDL-------ANLTEGAEVCKTMELCDLNRLEMTTLPDKI 223

Query: 167 ANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDN 226
             L  L++L+L  NKL  LP  + KLT+L  L L  N I T+ P++  L NL ML +R N
Sbjct: 224 GLLTNLKILNLYDNKLTALPPAIGKLTNLTALGLNENSISTLPPELGKLKNLQMLDLRFN 283

Query: 227 KIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           K+  +PPE+G   NLV LDL HN +      +     L  LD+Q+N L  +P  LG+L +
Sbjct: 284 KLTAIPPEIG---NLV-LDLQHNSISSFAS-VAKLEKLENLDIQYNNLETLPQGLGSLKS 338

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L RL L YN ++ +P  +     L E ++EG  L+ LP  + S L +++ I LSRN    
Sbjct: 339 LKRLHLKYNHIKELPREIGDLDKLEELDLEGNRLTGLPTEI-SKLKNLHKIYLSRNMLAE 397

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P     Q  S+  +    NQ+  +  G       L  +++  N LT L   +     L 
Sbjct: 398 LPDE-LGQLKSLEELFLNDNQLTNL--GSVVMLPGLRVLDISSNELTKLTPSIAMLTNLH 454

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
           EL+   N+++ L  +I  LVNL +L  ++N+L  LP+ IGNL  LK L+L  N L+ LP 
Sbjct: 455 ELHASANELTNLVPEIGQLVNLRLLDFNDNMLNSLPAEIGNLTSLKKLNLGGNLLKELPP 514

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
           EIG L  L  L+L  N+L +L   IG L +L+ L++ EN L  +P E+G+++ L  L  N
Sbjct: 515 EIGKLTGLSCLLLNYNKLTTLTSQIGSLLSLTELNLDENKLTELPTEMGSMKGLEVLTFN 574

Query: 527 DNTC---------LNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYL 573
           DN           L+N+   L L   +++  +D+ PL  IP EI  GG   +  YL
Sbjct: 575 DNDINDLPDTLYNLDNLSSPLWLFLRIRLFGMDDNPLEDIPQEITEGGSQAVFNYL 630



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 111/215 (51%), Gaps = 13/215 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD+S + +T L PS+  LT+L EL+   N+L +L  +IG + NL  L   +N L SLP  
Sbjct: 433 LDISSNELTKLTPSIAMLTNLHELHASANELTNLVPEIGQLVNLRLLDFNDNMLNSLPAE 492

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + NL  L+ L+L  N L ELP  + KLT L  L L +N++ T+   I  L +L+ L++ +
Sbjct: 493 IGNLTSLKKLNLGGNLLKELPPEIGKLTGLSCLLLNYNKLTTLTSQIGSLLSLTELNLDE 552

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+ ELP E+G +K L  L    N + +LP  + N             L N+   L   +
Sbjct: 553 NKLTELPTEMGSMKGLEVLTFNDNDINDLPDTLYN-------------LDNLSSPLWLFL 599

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
            +    +  N LE +P+ +++      FN  G  L
Sbjct: 600 RIRLFGMDDNPLEDIPQEITEGGSQAVFNYLGDRL 634



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 81/159 (50%), Gaps = 12/159 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD + + +  LP  +  LT L++L L GN L  LP +IG +T L+CL L  N LT+L   
Sbjct: 479 LDFNDNMLNSLPAEIGNLTSLKKLNLGGNLLKELPPEIGKLTGLSCLLLNYNKLTTLTSQ 538

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY-LSNLS----- 219
           + +L  L  L+L  NKL ELP  +  +  L++L    N I  + PD  Y L NLS     
Sbjct: 539 IGSLLSLTELNLDENKLTELPTEMGSMKGLEVLTFNDNDINDL-PDTLYNLDNLSSPLWL 597

Query: 220 -----MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
                +  M DN + ++P E+ E  +    +   + L+E
Sbjct: 598 FLRIRLFGMDDNPLEDIPQEITEGGSQAVFNYLGDRLQE 636


>gi|333983716|ref|YP_004512926.1| adenylate cyclase [Methylomonas methanica MC09]
 gi|333807757|gb|AEG00427.1| Adenylate cyclase [Methylomonas methanica MC09]
          Length = 504

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 170/458 (37%), Positives = 254/458 (55%), Gaps = 24/458 (5%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           NL L+K +I  L       THL+   L  N+L  +P  IG + NLTCL L+ N LT LP+
Sbjct: 61  NLSLNKDTILSL-------THLD---LRHNQLTEVPDYIGKLINLTCLDLSNNQLTKLPE 110

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSL-KILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           S+ NL +L  L L+ NKL++LP  + +LT+L   L+L  N++K +   I  LSNL+ + +
Sbjct: 111 SIGNLTRLTDLYLQFNKLSDLPESIGRLTNLTNSLWLSNNQLKKLPDSIGNLSNLTGIIL 170

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
             N++ ELP  + +L NL  L L+ N L  LP+ IGN T L +L L  N+L  +P  +GN
Sbjct: 171 SGNQLTELPESISKLINLTNLSLSDNKLNILPESIGNLTKLRSLTLSGNQLTKLPKSIGN 230

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L  L+ L L+ N L  VPE    C+  N  N+   +L S   G+L + +  +N TL +  
Sbjct: 231 LRKLSELSLAGNNLTEVPE----CIG-NLINLTSLSLGSGSRGVLKTKSPESNDTLKK-- 283

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
                S G  +    +SI     Q+ K+P  I     NL ++ +++N L  LP  +G   
Sbjct: 284 --LPESIGNLKMLKSFSIG--STQLTKLPESI-GNLTNLRELFLENNQLIELPESIGNLT 338

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            L +L L  NQ+ KL + I NL  L+ ++L NN L  LP SIGN+  L  L L +N+L  
Sbjct: 339 KLDDLRLSYNQLIKLPDCIGNLTKLKRIILENNQLIDLPESIGNMTNLVELRLSDNQLIK 398

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           LP  +G L +L+ L L  N+LV +P AIG+LT L+ LS+G+N +  +PE IG L  L  L
Sbjct: 399 LPESLGNLTKLEYLQLNHNRLVEIPEAIGNLTKLTRLSIGDNQIVELPESIGNLSKLTRL 458

Query: 524 YLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L+ N  +  +P        L+ + L++ P+  +P+E+
Sbjct: 459 CLHKNQ-ITKLPESFGKLKKLKDLYLNSNPIKYLPAEL 495



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 156/431 (36%), Positives = 224/431 (51%), Gaps = 41/431 (9%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT-CLGLAENSLT 160
           N+  LDLS + +T LP S+  LT L +LYL  NKL+ LP  IG +TNLT  L L+ N L 
Sbjct: 94  NLTCLDLSNNQLTKLPESIGNLTRLTDLYLQFNKLSDLPESIGRLTNLTNSLWLSNNQLK 153

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LPDS+ NL  L  + L  N+L ELP  + KL                        NL+ 
Sbjct: 154 KLPDSIGNLSNLTGIILSGNQLTELPESISKLI-----------------------NLTN 190

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+ DNK+  LP  +G L  L +L L+ N L +LPK IGN   L  L L  N L  +P+ 
Sbjct: 191 LSLSDNKLNILPESIGNLTKLRSLTLSGNQLTKLPKSIGNLRKLSELSLAGNNLTEVPEC 250

Query: 281 LGNLINLTRLRL--------------SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           +GNLINLT L L              S + L+ +PE++     L  F++    L+ LP+ 
Sbjct: 251 IGNLINLTSLSLGSGSRGVLKTKSPESNDTLKKLPESIGNLKMLKSFSIGSTQLTKLPES 310

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
           +  +LT++  + L  N+    P       T +  +   +NQ+ K+P  I +  K L ++ 
Sbjct: 311 I-GNLTNLRELFLENNQLIELPES-IGNLTKLDDLRLSYNQLIKLPDCIGNLTK-LKRII 367

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           +++N L  LP  +G    L EL L  NQ+ KL E + NL  LE L L++N L ++P +IG
Sbjct: 368 LENNQLIDLPESIGNMTNLVELRLSDNQLIKLPESLGNLTKLEYLQLNHNRLVEIPEAIG 427

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
           NL KL  L + +N++  LP  IG L +L RL L  NQ+  LP + G L  L  L +  N 
Sbjct: 428 NLTKLTRLSIGDNQIVELPESIGNLSKLTRLCLHKNQITKLPESFGKLKKLKDLYLNSNP 487

Query: 507 LQSIPEEIGTL 517
           ++ +P E+  L
Sbjct: 488 IKYLPAELSHL 498



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 130/256 (50%), Gaps = 14/256 (5%)

Query: 58  GVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLP 117
           G   +  +  K PESN    T KK      +L + K F            +  + +T LP
Sbjct: 263 GSGSRGVLKTKSPESND---TLKKLPESIGNLKMLKSF-----------SIGSTQLTKLP 308

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
            S+  LT+L EL+L  N+L  LP  IG +T L  L L+ N L  LPD + NL +L+ + L
Sbjct: 309 ESIGNLTNLRELFLENNQLIELPESIGNLTKLDDLRLSYNQLIKLPDCIGNLTKLKRIIL 368

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
            +N+L +LP  +  +T+L  L L  N++  +   +  L+ L  L +  N++ E+P  +G 
Sbjct: 369 ENNQLIDLPESIGNMTNLVELRLSDNQLIKLPESLGNLTKLEYLQLNHNRLVEIPEAIGN 428

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L  L  L +  N + ELP+ IGN + L  L L  N++  +P+  G L  L  L L+ N +
Sbjct: 429 LTKLTRLSIGDNQIVELPESIGNLSKLTRLCLHKNQITKLPESFGKLKKLKDLYLNSNPI 488

Query: 298 ESVPETLSKCVHLNEF 313
           + +P  LS  + + +F
Sbjct: 489 KYLPAELSHLIKITKF 504


>gi|428164461|gb|EKX33486.1| hypothetical protein GUITHDRAFT_81410 [Guillardia theta CCMP2712]
          Length = 493

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 158/449 (35%), Positives = 236/449 (52%), Gaps = 27/449 (6%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           I+ LPPS+ +L +++ L L  N+L SLP+Q G +T L  L ++ N L  LP S+ NL  L
Sbjct: 31  ISELPPSIGQLNNVQSLALDFNQLNSLPNQFGDMTALVTLTISHNLLKYLPTSIGNLPNL 90

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
           R+LDL HN L  LP  V  L  +  L    N++ TV   I   + L  L +  N I  LP
Sbjct: 91  RILDLNHNMLRSLPQTVGFLRLMSELKCNANQLTTVPTTIGECTALRQLDLSFNAISALP 150

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            E+G L  +  L L +N L+ +P  IG  T+L  L+L  N L  +P  LGN+  L  L +
Sbjct: 151 LEIGRLTKMKQLLLNNNRLDSIPASIGTMTLLQELNLFENPLKGLPTELGNIQKLKTLVV 210

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
             N+L ++P T+     L E  +    + +LP   + SLTS+N + L+ N     P+   
Sbjct: 211 DVNQLRTLPATIGALGQLRELQLGDNRIENLPAS-IGSLTSLNTLILTDNNLPEIPA--- 266

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                            +I Y       NL+ +++  N +TSLPL++G    L  LNL  
Sbjct: 267 -----------------EIGY-----LTNLTFLSLSGNPITSLPLEIGGLSALRALNLAK 304

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N +  L   I +L  L+VL L  N L+ LP SIG+L  L  L L+ N L SLP E+G + 
Sbjct: 305 NSLISLPVSIGDLALLQVLHLHENELEALPESIGDLSALTDLRLDHNNLTSLPPEVGVMS 364

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            L  L+L  NQL +LP +IG LT L  L++  N L  +P E+  +  L  L+++DN  L+
Sbjct: 365 SLTELLLDGNQLNTLPLSIGRLTELQVLNLDGNRLSLLPPEVAGMTALRELWVHDNK-LS 423

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            +P  +A  +NL +++L N  L+ +P+ +
Sbjct: 424 VVPEGIADLTNLNVLTLSNNELTVLPANM 452



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/335 (34%), Positives = 171/335 (51%), Gaps = 30/335 (8%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS ++I+ LP  + +LT +++L L  N+L S+P+ IG +T L  L L EN L  LP  
Sbjct: 139 LDLSFNAISALPLEIGRLTKMKQLLLNNNRLDSIPASIGTMTLLQELNLFENPLKGLPTE 198

Query: 166 LANLQ-----------------------QLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           L N+Q                       QLR L L  N++  LP  +  LTSL  L L  
Sbjct: 199 LGNIQKLKTLVVDVNQLRTLPATIGALGQLRELQLGDNRIENLPASIGSLTSLNTLILTD 258

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N +  +  +I YL+NL+ LS+  N I  LP E+G L  L  L+LA N L  LP  IG+  
Sbjct: 259 NNLPEIPAEIGYLTNLTFLSLSGNPITSLPLEIGGLSALRALNLAKNSLISLPVSIGDLA 318

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           +L  L L  NEL  +P+ +G+L  LT LRL +N L S+P  +     L E  ++G  L++
Sbjct: 319 LLQVLHLHENELEALPESIGDLSALTDLRLDHNNLTSLPPEVGVMSSLTELLLDGNQLNT 378

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
           LP   +  LT +  + L  N+ +  P    G T    ++      N++  +P GI +   
Sbjct: 379 LPLS-IGRLTELQVLNLDGNRLSLLPPEVAGMTALRELW---VHDNKLSVVPEGI-ADLT 433

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
           NL+ + + +N LT LP ++   V L EL +  N +
Sbjct: 434 NLNVLTLSNNELTVLPANMTRLVSLNELWIKDNNL 468



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/268 (33%), Positives = 136/268 (50%), Gaps = 25/268 (9%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L  + I +LP S+  LT L  L L  N L  +P++IGY+TNLT L L+ N +TSLP  
Sbjct: 231 LQLGDNRIENLPASIGSLTSLNTLILTDNNLPEIPAEIGYLTNLTFLSLSGNPITSLPLE 290

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  LR L+L  N L  LP+ +  L  L++L+L                        +
Sbjct: 291 IGGLSALRALNLAKNSLISLPVSIGDLALLQVLHLH-----------------------E 327

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP  +G+L  L  L L HN+L  LP E+G  + L  L L  N+L  +P  +G L 
Sbjct: 328 NELEALPESIGDLSALTDLRLDHNNLTSLPPEVGVMSSLTELLLDGNQLNTLPLSIGRLT 387

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L  NRL  +P  ++    L E  V    LS +P+G ++ LT++N +TLS N+ T
Sbjct: 388 ELQVLNLDGNRLSLLPPEVAGMTALRELWVHDNKLSVVPEG-IADLTNLNVLTLSNNELT 446

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPY 373
             P+   T+  S+  +  + N +   P+
Sbjct: 447 VLPANM-TRLVSLNELWIKDNNLKSHPF 473


>gi|421119264|ref|ZP_15579588.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347894|gb|EKO98745.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 526

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 155/436 (35%), Positives = 226/436 (51%), Gaps = 4/436 (0%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L G KL +LP +IG + NL  L L  N LT LP  +  L+ L+ LDLR N+L   P V
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L  L+ L L  NR+  +  +I  L NL  L +  NK+   P E+G+L+NL  L L+ 
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L  LPKEIG    L TLDLQ N+   +P  +G L NL  L L  NRL   P+ + +  
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLVNNRLTVFPKEIGQLQ 232

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITL---SRNKFTAYPSGGPTQFTSVYSINFEH 365
           +L +  +    LS      +  L   +N+ L   + N      +    +   V+ ++ E+
Sbjct: 233 NLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEY 292

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
               +    +  + +NL  +N+ D   ++LP ++     L  L LG N +  +  +I  L
Sbjct: 293 KDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQL 352

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
            NLE L L  N L++LP  IG LR L+ L L +N L+  P EI  LK+LQ+L L  NQ  
Sbjct: 353 KNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFT 412

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
           + P+ IG L NL  L++  N L ++  EI  L+NL  L LNDN     +P E+     LQ
Sbjct: 413 TFPKEIGKLENLQTLNLQRNQLTNLTAEIEQLKNLQELDLNDNQ-FTVLPKEIGKLKKLQ 471

Query: 546 IMSLDNCPLSQIPSEI 561
            + L N  L+ +P+EI
Sbjct: 472 TLDLRNNQLTTLPTEI 487



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 152/454 (33%), Positives = 224/454 (49%), Gaps = 55/454 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  + +L +L+EL L  N L  LP +IG + NL  L L +N L + P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L  LDL  N+L  LP  + +L +L+ L L  N++ T   +I  L NL  L + +
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL TLDL  N    LPKEIG    L TL+L +N L   P  +G L 
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLVNNRLTVFPKEIGQLQ 232

Query: 286 NLTRLRLSYNRL------------------------------------------------ 297
           NL  L L  N L                                                
Sbjct: 233 NLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEY 292

Query: 298 ----ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
               +S P+ + K  +L   N+  C  S+LP  + S L ++  + L  N     PS    
Sbjct: 293 KDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEI-SRLKNLKYLALGLNGLKNIPSE-IG 350

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q  ++ ++N E N+++++P  I  + +NL K+++  N L   P ++     L +L+L  N
Sbjct: 351 QLKNLEALNLEANELERLPKEI-GQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVN 409

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           Q +   ++I  L NL+ L L  N L  L + I  L+ L+ LDL +N+   LP EIG LK+
Sbjct: 410 QFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIEQLKNLQELDLNDNQFTVLPKEIGKLKK 469

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           LQ L L++NQL +LP  IG L NL +L +  N L
Sbjct: 470 LQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQL 503



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 197/420 (46%), Gaps = 56/420 (13%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
            +++L L   ++  +  +I  L NL  L+++ N +  LP E+G+L+NL  LDL  N L  
Sbjct: 49  DVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLAT 108

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
            P  I     L +LDL  N L+ +P+ +G L NL  L L  N+L + P+ + +  +L + 
Sbjct: 109 FPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKL 168

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
            +    L++LP   +  L ++  + L  N+FT  P     Q  ++ ++N  +N++   P 
Sbjct: 169 WLSENRLTALPKE-IGQLKNLQTLDLQDNQFTTLPK-EIGQLQNLQTLNLVNNRLTVFPK 226

Query: 374 GIFSRAKNLSKVNMKDN------------LLTSLPLDL------GTWVGLT--------- 406
            I  + +NL  + +  N            L     LDL      G +  L          
Sbjct: 227 EI-GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKV 285

Query: 407 -ELNLGTNQISK-LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
            EL+L     S+   + I    NL  L L +     LP  I  L+ LK L L  N L+++
Sbjct: 286 FELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNI 345

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ---------------- 508
           P+EIG LK L+ L L++N+L  LP+ IG L NL  LS+ +N L+                
Sbjct: 346 PSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLD 405

Query: 509 -------SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                  + P+EIG LENL TL L  N  L N+  E+    NLQ + L++   + +P EI
Sbjct: 406 LSVNQFTTFPKEIGKLENLQTLNLQRNQ-LTNLTAEIEQLKNLQELDLNDNQFTVLPKEI 464



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 107/199 (53%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  N+  L+L     + LP  + +L +L+ L L  N L ++PS+IG + NL  L L  N 
Sbjct: 305 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 364

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP  +  L+ L+ L L  N L   P  + +L  L+ L L  N+  T   +I  L NL
Sbjct: 365 LERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENL 424

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L+++ N++  L  E+ +LKNL  LDL  N    LPKEIG    L TLDL++N+L  +P
Sbjct: 425 QTLNLQRNQLTNLTAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP 484

Query: 279 DMLGNLINLTRLRLSYNRL 297
             +G L NL  L L  N+L
Sbjct: 485 TEIGQLQNLQWLYLQNNQL 503



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 106/215 (49%), Gaps = 4/215 (1%)

Query: 107 DLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSL 166
           D S+S     P  + K  +L  L LY    ++LP +I  + NL  L L  N L ++P  +
Sbjct: 294 DFSQS----FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEI 349

Query: 167 ANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDN 226
             L+ L  L+L  N+L  LP  + +L +L+ L L  N +K    +I+ L  L  L +  N
Sbjct: 350 GQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVN 409

Query: 227 KIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           +    P E+G+L+NL TL+L  N L  L  EI     L  LDL  N+   +P  +G L  
Sbjct: 410 QFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIEQLKNLQELDLNDNQFTVLPKEIGKLKK 469

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
           L  L L  N+L ++P  + +  +L    ++   LS
Sbjct: 470 LQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS 504


>gi|421127222|ref|ZP_15587446.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136033|ref|ZP_15596144.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019767|gb|EKO86581.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435312|gb|EKP84444.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 427

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/394 (35%), Positives = 225/394 (57%), Gaps = 26/394 (6%)

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           KL +LP +IG + NL  L L++N L  LP  +  L+ L++LDLR N+L  LP  + +L +
Sbjct: 38  KLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLIILPKEIRQLKN 97

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L++L LR N++  +  +I  L NL  L + +N++   P E+G+L+ L  L+L+ N ++ +
Sbjct: 98  LQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTI 157

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           PKEI     L +L L +N+L  +P  +G L  L  L LSYN+++++P+ + K   L    
Sbjct: 158 PKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLY 217

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +    L++LP  +                          +   + S+  ++NQ+  +P  
Sbjct: 218 LHKNQLTTLPQEI-------------------------EKLQKLESLGLDNNQLTTLPQE 252

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           I  + +NL  + + +N LT++P ++G    L +L L +NQ++ + ++I  L NL++L L 
Sbjct: 253 I-GQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLG 311

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
           NN L  LP  IG L+ L+ L L  N+L ++P EIG L+ LQ L L +NQL ++P+ IG L
Sbjct: 312 NNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQL 371

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            NL  L +  N L +IP+EIG L+NL TLYL +N
Sbjct: 372 QNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 405



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 144/395 (36%), Positives = 217/395 (54%), Gaps = 4/395 (1%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L  +L N   +RVLDL   KL  LP  + +L +L++L L  N++  +  +I+ L NL M
Sbjct: 18  DLTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQM 77

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +R N++  LP E+ +LKNL  LDL  N L  LPKEIG    L  L L +N+L   P  
Sbjct: 78  LDLRSNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKE 137

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L  L  L LS N+++++P+ + K   L    +    L++LP   +  L  +  + LS
Sbjct: 138 IGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQE-IGKLQKLQWLYLS 196

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P     +   +  +    NQ+  +P  I  + + L  + + +N LT+LP ++G
Sbjct: 197 YNQIKTLPQ-EIEKLQKLQWLYLHKNQLTTLPQEI-EKLQKLESLGLDNNQLTTLPQEIG 254

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L L  NQ++ + ++I +L NL+ L L +N L  +P  IG L+ L+ LDL  N+
Sbjct: 255 QLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQ 314

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L  LP EIG L+ LQ L L +NQL ++P+ IG L NL  L +  N L +IP+EIG L+NL
Sbjct: 315 LTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNL 374

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
             LYL++N  +  IP E+    NLQ + L N   S
Sbjct: 375 QELYLSNNQLI-TIPKEIGQLQNLQTLYLRNNQFS 408



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 144/409 (35%), Positives = 221/409 (54%), Gaps = 29/409 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + +L +L+ L L  N+L  LP +I  + NL  L L  N L  LP  
Sbjct: 32  LDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLIILPKE 91

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L++LDLR N+L  LP  + KL +L+ LYL  N++ T                  
Sbjct: 92  IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTT------------------ 133

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
                 P E+G+L+ L  L+L+ N ++ +PKEI     L +L L +N+L  +P  +G L 
Sbjct: 134 -----FPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQ 188

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LSYN+++++P+ + K   L    +    L++LP   +  L  + ++ L  N+ T
Sbjct: 189 KLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQE-IEKLQKLESLGLDNNQLT 247

Query: 346 AYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
             P   G  Q   V  +N  +NQ+  IP  I    +NL  + +  N LT++P ++G    
Sbjct: 248 TLPQEIGQLQNLKVLFLN--NNQLTTIPQEI-GHLQNLQDLYLVSNQLTTIPKEIGQLQN 304

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L  L+LG NQ++ L ++I  L NL+ L LSNN L  +P  IG L+ L+ L L  N+L ++
Sbjct: 305 LQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTI 364

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           P EIG L+ LQ L L +NQL+++P+ IG L NL  L +  NN  SI E+
Sbjct: 365 PKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYL-RNNQFSIEEK 412



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 201/384 (52%), Gaps = 26/384 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDLS + +  LP  + +L +L+ L L  N+L  LP +I  + NL  L L  N LT
Sbjct: 50  KNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLIILPKEIRQLKNLQMLDLRSNQLT 109

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L L +N+L   P  + KL  L+ L L  N+IKT+  +I+ L  L  
Sbjct: 110 ILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQS 169

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++  LP E+G+L+ L  L L++N ++ LP+EI     L  L L  N+L  +P  
Sbjct: 170 LYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQE 229

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  L  L L  N+L ++P+ + +  +L    +    L+++P   +  L ++ ++ L 
Sbjct: 230 IEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQE-IGHLQNLQDLYLV 288

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL  +++ +N LT LP ++G
Sbjct: 289 SNQLTTIPKE-------------------------IGQLQNLQMLDLGNNQLTILPKEIG 323

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L EL L  NQ++ + ++I  L NL+ L LSNN L  +P  IG L+ L+ L L  N+
Sbjct: 324 KLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQ 383

Query: 461 LESLPNEIGFLKELQRLILQSNQL 484
           L ++P EIG L+ LQ L L++NQ 
Sbjct: 384 LITIPKEIGQLQNLQTLYLRNNQF 407



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 119/356 (33%), Positives = 175/356 (49%), Gaps = 50/356 (14%)

Query: 252 EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN 311
           ++L K + N   +  LDL   +L  +P  +G L NL  L LS N+L  +P+ + +  +L 
Sbjct: 17  QDLTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQ 76

Query: 312 EFNVEGCALSSLPDGL----------------------LSSLTSINNITLSRNKFTAYPS 349
             ++    L  LP  +                      +  L ++  + LS N+ T +P 
Sbjct: 77  MLDLRSNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPK 136

Query: 350 G-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG-----TWV 403
             G  Q   +  +N   NQI  IP  I  + + L  + + +N LT+LP ++G      W+
Sbjct: 137 EIGKLQ--KLQWLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWL 193

Query: 404 GLT------------------ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
            L+                   L L  NQ++ L ++I+ L  LE L L NN L  LP  I
Sbjct: 194 YLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEI 253

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
           G L+ LK L L  N+L ++P EIG L+ LQ L L SNQL ++P+ IG L NL  L +G N
Sbjct: 254 GQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNN 313

Query: 506 NLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L  +P+EIG L+NL  LYL++N  L  IP E+    NLQ + L N  L+ IP EI
Sbjct: 314 QLTILPKEIGKLQNLQELYLSNNQ-LTTIPKEIGQLQNLQELYLSNNQLTTIPKEI 368


>gi|421118972|ref|ZP_15579299.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348312|gb|EKO99138.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 448

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/400 (34%), Positives = 226/400 (56%), Gaps = 26/400 (6%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L   KL +LP +IG + NL  L L++N L  LP  +  L+ L++LDL  N+L  LP  
Sbjct: 53  LILSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQLIILPKE 112

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +L++L LR N++  +  +I  L NL  L + +N++   P E+G+L+ L  L+L+ 
Sbjct: 113 IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSA 172

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N ++ +PKEI     L +L L +N+L  +P  +G L  L  L LSYN+++++P+ + K  
Sbjct: 173 NQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQ 232

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
            L    +    L++LP  +                          +   + S+  ++NQ+
Sbjct: 233 KLQWLYLHKNQLTTLPQEI-------------------------EKLQKLESLGLDNNQL 267

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
             +P  I  + +NL  + + +N LT++P ++G    L +L L +NQ++ + ++I  L NL
Sbjct: 268 TTLPQEI-GQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNL 326

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           ++L L NN L  LP  IG L+ L+ L L  N+L ++P EIG L+ LQ L L +NQL ++P
Sbjct: 327 QMLDLGNNQLTILPKEIGKLQNLQTLYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIP 386

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           + IG L NL  L +  N L +IP+EIG L+NL TLYL +N
Sbjct: 387 KEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 426



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 141/395 (35%), Positives = 215/395 (54%), Gaps = 4/395 (1%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L ++  N   +RVL L   KL  LP  + +L +L++L L  N++  +  +I+ L NL M
Sbjct: 39  DLTEAFQNPLDVRVLILSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQM 98

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+ +LKNL  LDL  N L  LPKEIG    L  L L +N+L   P  
Sbjct: 99  LDLHSNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKE 158

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L  L  L LS N+++++P+ + K   L    +    L++LP   +  L  +  + LS
Sbjct: 159 IGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQE-IGKLQKLQWLNLS 217

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P     +   +  +    NQ+  +P  I  + + L  + + +N LT+LP ++G
Sbjct: 218 YNQIKTLPQ-EIEKLQKLQWLYLHKNQLTTLPQEI-EKLQKLESLGLDNNQLTTLPQEIG 275

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L L  NQ++ + ++I +L NL+ L L +N L  +P  IG L+ L+ LDL  N+
Sbjct: 276 QLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQ 335

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L  LP EIG L+ LQ L L +NQL ++P+ IG L NL  L +  N L +IP+EIG L+NL
Sbjct: 336 LTILPKEIGKLQNLQTLYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNL 395

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
             LYL++N  +  IP E+    NLQ + L N   S
Sbjct: 396 QELYLSNNQLI-TIPKEIGQLQNLQTLYLRNNQFS 429



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 141/369 (38%), Positives = 204/369 (55%), Gaps = 6/369 (1%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
            +++L L   ++K +   I  L NL ML + DN++  LP E+ +LKNL  LDL  N L  
Sbjct: 49  DVRVLILSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQLII 108

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LPKEI     L  LDL+ N+L  +P  +G L NL  L LS N+L + P+ + K   L   
Sbjct: 109 LPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWL 168

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIP 372
           N+    + ++P  +   L  + ++ L  N+ T  P   G  Q   +  +N  +NQI  +P
Sbjct: 169 NLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQEIGKLQ--KLQWLNLSYNQIKTLP 225

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + + L  + +  N LT+LP ++     L  L L  NQ++ L ++I  L NL+VL 
Sbjct: 226 QEI-EKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLF 284

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L+NN L  +P  IG+L+ L+ L L  N+L ++P EIG L+ LQ L L +NQL  LP+ IG
Sbjct: 285 LNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIG 344

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L +  N L +IP+EIG L+NL  LYL++N  L  IP E+    NLQ + L N 
Sbjct: 345 KLQNLQTLYLSNNQLTTIPKEIGQLQNLQELYLSNNQ-LTTIPKEIGQLQNLQELYLSNN 403

Query: 553 PLSQIPSEI 561
            L  IP EI
Sbjct: 404 QLITIPKEI 412



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 143/409 (34%), Positives = 220/409 (53%), Gaps = 29/409 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS+  +  LP  + +L +L+ L L  N+L  LP +I  + NL  L L  N L  LP  
Sbjct: 53  LILSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQLIILPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L++LDLR N+L  LP  + KL +L+ LYL  N++ T                  
Sbjct: 113 IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTT------------------ 154

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
                 P E+G+L+ L  L+L+ N ++ +PKEI     L +L L +N+L  +P  +G L 
Sbjct: 155 -----FPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQ 209

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LSYN+++++P+ + K   L    +    L++LP   +  L  + ++ L  N+ T
Sbjct: 210 KLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQE-IEKLQKLESLGLDNNQLT 268

Query: 346 AYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
             P   G  Q   V  +N  +NQ+  IP  I    +NL  + +  N LT++P ++G    
Sbjct: 269 TLPQEIGQLQNLKVLFLN--NNQLTTIPQEI-GHLQNLQDLYLVSNQLTTIPKEIGQLQN 325

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L  L+LG NQ++ L ++I  L NL+ L LSNN L  +P  IG L+ L+ L L  N+L ++
Sbjct: 326 LQMLDLGNNQLTILPKEIGKLQNLQTLYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTI 385

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           P EIG L+ LQ L L +NQL+++P+ IG L NL  L +  NN  SI E+
Sbjct: 386 PKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYL-RNNQFSIEEK 433



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 202/384 (52%), Gaps = 26/384 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDLS + +  LP  + +L +L+ L L+ N+L  LP +I  + NL  L L  N LT
Sbjct: 71  KNLQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQLIILPKEIRQLKNLQMLDLRSNQLT 130

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L L +N+L   P  + KL  L+ L L  N+IKT+  +I+ L  L  
Sbjct: 131 ILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQS 190

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++  LP E+G+L+ L  L+L++N ++ LP+EI     L  L L  N+L  +P  
Sbjct: 191 LYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQE 250

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  L  L L  N+L ++P+ + +  +L    +    L+++P   +  L ++ ++ L 
Sbjct: 251 IEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQE-IGHLQNLQDLYLV 309

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL  +++ +N LT LP ++G
Sbjct: 310 SNQLTTIPKE-------------------------IGQLQNLQMLDLGNNQLTILPKEIG 344

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L L  NQ++ + ++I  L NL+ L LSNN L  +P  IG L+ L+ L L  N+
Sbjct: 345 KLQNLQTLYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQ 404

Query: 461 LESLPNEIGFLKELQRLILQSNQL 484
           L ++P EIG L+ LQ L L++NQ 
Sbjct: 405 LITIPKEIGQLQNLQTLYLRNNQF 428



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/144 (45%), Positives = 86/144 (59%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L+E  QN +++ VL+LS   LK LP  IG L+ L+ LDL +N+L  LP EI  LK LQ L
Sbjct: 40  LTEAFQNPLDVRVLILSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQML 99

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L SNQL+ LP+ I  L NL  L +  N L  +P+EIG L+NL  LYL++N  L   P E
Sbjct: 100 DLHSNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQ-LTTFPKE 158

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +     LQ ++L    +  IP EI
Sbjct: 159 IGKLQKLQWLNLSANQIKTIPKEI 182


>gi|428181668|gb|EKX50531.1| hypothetical protein GUITHDRAFT_66992 [Guillardia theta CCMP2712]
          Length = 614

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 169/507 (33%), Positives = 262/507 (51%), Gaps = 12/507 (2%)

Query: 57  CGVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHL 116
           C +   + V   H +S +  P     +     L+  ++F R K      LDLS + +T +
Sbjct: 2   CWLTKLEFVDASHNDSLEVPPREVVDKGAVVILDYLRKFNRAKWTA--KLDLSCNGLTFV 59

Query: 117 PPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLD 176
           P  V ++T+L +L L+ N L +LPS IG +  LT L + +N ++ LP  +  L  LR L 
Sbjct: 60  PIEVVRMTNLTQLKLFKNNLTNLPSAIGGLLKLTSLSVIDNKISVLPPEMGKLLNLRKLR 119

Query: 177 LRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELG 236
           + +N   +L  V+ ++T L+ L    N I  + P+   L     L + +N++  LP E+G
Sbjct: 120 ISYNDFTKLTPVIGQMTKLESLKADNNSITHLIPEFGKLD----LRLSNNQLESLPTEMG 175

Query: 237 ELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNR 296
            + +L  L L  N L+ +PKEIG+   L+ L LQ+N L  IP  LG L  L  L L +N+
Sbjct: 176 SMTSLTQLKLPFNLLKTVPKEIGDLENLIELTLQNNSLERIPMELGKLSQLEALMLDHNK 235

Query: 297 --LESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
             + S+P  + +C  L E  +    L+S+P  ++ + T I  + L  N+    P    T 
Sbjct: 236 DLINSLPANIGRCEKLKELWLSDNRLTSMP-VVIEAFTQIEVLKLVGNRIEELPKQIGT- 293

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
            TS+  ++   NQ+  +P  I + A NL K+ +  N L  +P+++     LT LN+G N+
Sbjct: 294 LTSLKELHLAWNQLTTLPVEIGNLA-NLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNR 352

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +  L  +I +L NLE     +N ++ +PSSIG L KLK LD  EN+L +LP+ IG L  L
Sbjct: 353 LPSLPNEIGDLDNLEEFRTHHNQIQAIPSSIGRLLKLKILDASENQLTTLPDSIGELTSL 412

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
             L L  N L +LP  IG+LT L  L +  N L  +P  +G L NL TL L  N  L ++
Sbjct: 413 AHLDLAVNNLEALPGTIGNLTALKKLLLYRNKLTILPLTVGKLTNLETLDLQTNR-LTSL 471

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEI 561
           P  +    NL   +L    L ++P  I
Sbjct: 472 PPGVGNLKNLMKFNLIQNALVKLPPSI 498



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 157/466 (33%), Positives = 233/466 (50%), Gaps = 46/466 (9%)

Query: 112 SITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQ 171
           SITHL P   KL    +L L  N+L SLP+++G +T+LT L L  N L ++P  + +L+ 
Sbjct: 147 SITHLIPEFGKL----DLRLSNNQLESLPTEMGSMTSLTQLKLPFNLLKTVPKEIGDLEN 202

Query: 172 LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR--IKTVHPDIQYLSNLSMLSMRDNKIR 229
           L  L L++N L  +PM + KL+ L+ L L  N+  I ++  +I     L  L + DN++ 
Sbjct: 203 LIELTLQNNSLERIPMELGKLSQLEALMLDHNKDLINSLPANIGRCEKLKELWLSDNRLT 262

Query: 230 ELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTR 289
            +P  +     +  L L  N +EELPK+IG  T L  L L  N+L  +P  +GNL NL +
Sbjct: 263 SMPVVIEAFTQIEVLKLVGNRIEELPKQIGTLTSLKELHLAWNQLTTLPVEIGNLANLEK 322

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS 349
           + LS+NRL+ +P  +     L   NV    L SLP+     +  ++N+   R        
Sbjct: 323 MLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPN----EIGDLDNLEEFRT------- 371

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
                          HNQI  IP  I  R   L  ++  +N LT+LP  +G    L  L+
Sbjct: 372 --------------HHNQIQAIPSSI-GRLLKLKILDASENQLTTLPDSIGELTSLAHLD 416

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           L  N +  L   I NL  L+ L+L  N L  LP ++G L  L+ LDL+ N+L SLP  +G
Sbjct: 417 LAVNNLEALPGTIGNLTALKKLLLYRNKLTILPLTVGKLTNLETLDLQTNRLTSLPPGVG 476

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            LK L +  L  N LV LP +IG L +L+ LS+ EN L  +P  +  L NL  L L+ N 
Sbjct: 477 NLKNLMKFNLIQNALVKLPPSIGSLESLTQLSLRENQLAILPASMNMLFNLQILSLSANR 536

Query: 530 CLNNIPF-----ELALCSN---------LQIMSLDNCPLSQIPSEI 561
                P       L +C +         LQ++++ +  L  +P +I
Sbjct: 537 LYELPPLIEDLTTLQVCQDLPQKSLTPSLQVLTISDNALETLPVKI 582



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 143/420 (34%), Positives = 230/420 (54%), Gaps = 17/420 (4%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNK--LASLPSQIGYVTNLTCLGLAENS 158
           EN++ L L  +S+  +P  + KL+ LE L L  NK  + SLP+ IG    L  L L++N 
Sbjct: 201 ENLIELTLQNNSLERIPMELGKLSQLEALMLDHNKDLINSLPANIGRCEKLKELWLSDNR 260

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LTS+P  +    Q+ VL L  N++ ELP  +  LTSLK L+L +N++ T+  +I  L+NL
Sbjct: 261 LTSMPVVIEAFTQIEVLKLVGNRIEELPKQIGTLTSLKELHLAWNQLTTLPVEIGNLANL 320

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             + +  N+++ +P E+  L +L  L++  N L  LP EIG+   L      HN++  IP
Sbjct: 321 EKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIGDLDNLEEFRTHHNQIQAIP 380

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L+ L  L  S N+L ++P+++ +   L   ++    L +LP G + +LT++  + 
Sbjct: 381 SSIGRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEALP-GTIGNLTALKKLL 439

Query: 339 LSRNKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
           L RNK T  P + G  + T++ +++ + N++  +P G+    KNL K N+  N L  LP 
Sbjct: 440 LYRNKLTILPLTVG--KLTNLETLDLQTNRLTSLPPGV-GNLKNLMKFNLIQNALVKLPP 496

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK-CLDL 456
            +G+   LT+L+L  NQ++ L   +  L NL++L LS N L +LP  I +L  L+ C DL
Sbjct: 497 SIGSLESLTQLSLRENQLAILPASMNMLFNLQILSLSANRLYELPPLIEDLTTLQVCQDL 556

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
            +  L            LQ L +  N L +LP  IG+   L+ L+V  N L+ +P  IG 
Sbjct: 557 PQKSLTP---------SLQVLTISDNALETLPVKIGNFRALTQLAVSNNQLKELPATIGA 607



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 43/388 (11%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE 156
           RC  E +  L LS + +T +P  +E  T +E L L GN++  LP QIG +T+L  L LA 
Sbjct: 247 RC--EKLKELWLSDNRLTSMPVVIEAFTQIEVLKLVGNRIEELPKQIGTLTSLKELHLAW 304

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N LT+LP  + NL  L  + L HN+L  +P+ +  LTSL  L +  NR+ ++  +I  L 
Sbjct: 305 NQLTTLPVEIGNLANLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIGDLD 364

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           NL       N+I+ +P  +G L  L  LD + N L  LP  IG  T L  LDL  N L  
Sbjct: 365 NLEEFRTHHNQIQAIPSSIGRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEA 424

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +GNL  L +L L  N+L  +P T+ K  +L   +++   L+SLP G+         
Sbjct: 425 LPGTIGNLTALKKLLLYRNKLTILPLTVGKLTNLETLDLQTNRLTSLPPGV--------- 475

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
                               ++   N   N + K+P  I S  ++L+++++++N L  LP
Sbjct: 476 ----------------GNLKNLMKFNLIQNALVKLPPSIGS-LESLTQLSLRENQLAILP 518

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLV---------------NLEVLVLSNNLLKKL 441
             +     L  L+L  N++ +L   I++L                +L+VL +S+N L+ L
Sbjct: 519 ASMNMLFNLQILSLSANRLYELPPLIEDLTTLQVCQDLPQKSLTPSLQVLTISDNALETL 578

Query: 442 PSSIGNLRKLKCLDLEENKLESLPNEIG 469
           P  IGN R L  L +  N+L+ LP  IG
Sbjct: 579 PVKIGNFRALTQLAVSNNQLKELPATIG 606



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 96/172 (55%), Gaps = 15/172 (8%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L ++ +T LP +V KLT+LE L L  N+L SLP  +G + NL    L +N+L  LP S+ 
Sbjct: 440 LYRNKLTILPLTVGKLTNLETLDLQTNRLTSLPPGVGNLKNLMKFNLIQNALVKLPPSIG 499

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS----------- 216
           +L+ L  L LR N+L  LP  +  L +L+IL L  NR+  + P I+ L+           
Sbjct: 500 SLESLTQLSLRENQLAILPASMNMLFNLQILSLSANRLYELPPLIEDLTTLQVCQDLPQK 559

Query: 217 ----NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTML 264
               +L +L++ DN +  LP ++G  + L  L +++N L+ELP  IG   +L
Sbjct: 560 SLTPSLQVLTISDNALETLPVKIGNFRALTQLAVSNNQLKELPATIGASCIL 611


>gi|359683929|ref|ZP_09253930.1| hypothetical protein Lsan2_04281 [Leptospira santarosai str.
           2000030832]
          Length = 504

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 148/399 (37%), Positives = 228/399 (57%), Gaps = 26/399 (6%)

Query: 133 GNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKL 192
           GNKL +LP +IG + NL  L L  N  T+LP+ + NLQ+L+ LDL HN+L  LP  +  L
Sbjct: 114 GNKLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNL 173

Query: 193 TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLE 252
             L+ L L  N++KT+  +I+ L  L  L + +N++  LP E+ +L+ L  L L +N L 
Sbjct: 174 QKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIEKLQKLEALHLGNNELT 233

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
            LPKEIGN   L  L+L  N+   +P+ +GNL  L +L L+++RL ++P+ +    +L E
Sbjct: 234 TLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQE 293

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            N+     ++LP+        I N+                    +  ++  ++Q+  +P
Sbjct: 294 LNLNSNQFTTLPE-------EIGNL------------------QKLQKLDLNYSQLTTLP 328

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + + L K+++  N L +LP ++G    L  L+L  N+++ L ++I NL NL+ L 
Sbjct: 329 KEI-GKLQKLQKLSLAQNQLKTLPKEIGKLQNLKNLSLSHNELTTLPKEIGNLQNLKELD 387

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L  N L  LP  IGNL+KL+ L L  N+L++LP EIG L+ LQ L L +NQL +LP+ IG
Sbjct: 388 LGGNQLTTLPEKIGNLQKLQELFLAGNRLKTLPKEIGNLQNLQTLNLNNNQLTTLPKEIG 447

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
           +L +L  L++  N+L S PEEIG L+ L  LYL  N  L
Sbjct: 448 NLQSLESLNLSGNSLTSFPEEIGKLQKLKWLYLGGNPFL 486



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 143/395 (36%), Positives = 216/395 (54%), Gaps = 26/395 (6%)

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
           + +T LP  +  L +L+EL L  N+  +LP +IG +  L  L L+ N LT+LP  + NLQ
Sbjct: 115 NKLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQ 174

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           +L+ LDL  N+L  LP  + KL  L+ L+L  N + T+  +I+ L  L  L + +N++  
Sbjct: 175 KLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIEKLQKLEALHLGNNELTT 234

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+G L+NL  L+L  N    LP+EIGN   L  L L H+ L  +P  +GNL NL  L
Sbjct: 235 LPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQEL 294

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+ N+  ++PE +     L + ++    L++LP   +  L  +  ++L++N+    P  
Sbjct: 295 NLNSNQFTTLPEEIGNLQKLQKLDLNYSQLTTLPKE-IGKLQKLQKLSLAQNQLKTLPK- 352

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                           +I K+        +NL  +++  N LT+LP ++G    L EL+L
Sbjct: 353 ----------------EIGKL--------QNLKNLSLSHNELTTLPKEIGNLQNLKELDL 388

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
           G NQ++ L E I NL  L+ L L+ N LK LP  IGNL+ L+ L+L  N+L +LP EIG 
Sbjct: 389 GGNQLTTLPEKIGNLQKLQELFLAGNRLKTLPKEIGNLQNLQTLNLNNNQLTTLPKEIGN 448

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
           L+ L+ L L  N L S P  IG L  L +L +G N
Sbjct: 449 LQSLESLNLSGNSLTSFPEEIGKLQKLKWLYLGGN 483



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 135/382 (35%), Positives = 206/382 (53%), Gaps = 26/382 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L+ +  T LP  +  L  L+ L L  N+L +LP +IG +  L  L LA+N L 
Sbjct: 128 QNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLK 187

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ+L  L L +N+L  LP  + KL  L+ L+L  N + T+  +I  L NL  
Sbjct: 188 TLPKEIEKLQKLEALHLGNNELTTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQE 247

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  N+   LP E+G L+ L  L LAH+ L  LPKEIGN   L  L+L  N+   +P+ 
Sbjct: 248 LNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEE 307

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +GNL  L +L L+Y++L ++P+ + K   L + ++    L +LP   +  L ++ N++LS
Sbjct: 308 IGNLQKLQKLDLNYSQLTTLPKEIGKLQKLQKLSLAQNQLKTLPKE-IGKLQNLKNLSLS 366

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                               +NL ++++  N LT+LP  +G
Sbjct: 367 HNELTTLPKE-------------------------IGNLQNLKELDLGGNQLTTLPEKIG 401

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L EL L  N++  L ++I NL NL+ L L+NN L  LP  IGNL+ L+ L+L  N 
Sbjct: 402 NLQKLQELFLAGNRLKTLPKEIGNLQNLQTLNLNNNQLTTLPKEIGNLQSLESLNLSGNS 461

Query: 461 LESLPNEIGFLKELQRLILQSN 482
           L S P EIG L++L+ L L  N
Sbjct: 462 LTSFPEEIGKLQKLKWLYLGGN 483



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/336 (36%), Positives = 181/336 (53%), Gaps = 27/336 (8%)

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+  LP E+G L+NL  L+L  N    LP+EIGN   L TLDL HN L  +P  +GNL 
Sbjct: 115 NKLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQ 174

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L+ N+L+++P+ + K   L   ++    L++LP  +   L  +  + L  N+ T
Sbjct: 175 KLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEI-EKLQKLEALHLGNNELT 233

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                               +NL ++N+  N  T+LP ++G    L
Sbjct: 234 TLPKE-------------------------IGNLQNLQELNLNSNQFTTLPEEIGNLQKL 268

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            +L+L  ++++ L ++I NL NL+ L L++N    LP  IGNL+KL+ LDL  ++L +LP
Sbjct: 269 QKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSQLTTLP 328

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            EIG L++LQ+L L  NQL +LP+ IG L NL  LS+  N L ++P+EIG L+NL  L L
Sbjct: 329 KEIGKLQKLQKLSLAQNQLKTLPKEIGKLQNLKNLSLSHNELTTLPKEIGNLQNLKELDL 388

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             N  L  +P ++     LQ + L    L  +P EI
Sbjct: 389 GGNQ-LTTLPEKIGNLQKLQELFLAGNRLKTLPKEI 423



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/244 (37%), Positives = 140/244 (57%), Gaps = 1/244 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L+ +  T LP  +  L  L++L L  ++L +LP +IG + NL  L L  N  T
Sbjct: 243 QNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFT 302

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ + NLQ+L+ LDL +++L  LP  + KL  L+ L L  N++KT+  +I  L NL  
Sbjct: 303 TLPEEIGNLQKLQKLDLNYSQLTTLPKEIGKLQKLQKLSLAQNQLKTLPKEIGKLQNLKN 362

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+  N++  LP E+G L+NL  LDL  N L  LP++IGN   L  L L  N L  +P  
Sbjct: 363 LSLSHNELTTLPKEIGNLQNLKELDLGGNQLTTLPEKIGNLQKLQELFLAGNRLKTLPKE 422

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +GNL NL  L L+ N+L ++P+ +     L   N+ G +L+S P+  +  L  +  + L 
Sbjct: 423 IGNLQNLQTLNLNNNQLTTLPKEIGNLQSLESLNLSGNSLTSFPEE-IGKLQKLKWLYLG 481

Query: 341 RNKF 344
            N F
Sbjct: 482 GNPF 485


>gi|24216020|ref|NP_713501.1| hypothetical protein LA_3321 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075101|ref|YP_005989420.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|24197248|gb|AAN50519.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458892|gb|AER03437.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
          Length = 452

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 153/415 (36%), Positives = 224/415 (53%), Gaps = 26/415 (6%)

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
            + T L  +++    +  L L   KL +LP +IG + NL  L L+ NSLT+LP  +  L+
Sbjct: 35  GTYTDLAKTLQNPLKVRTLDLRYQKLTTLPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLR 94

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
            L+ LDL  N L  LP  V +L +L+ L L  NR+ T+  +I  L NL  L +  NK+  
Sbjct: 95  NLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTT 154

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+ +L+NL  LDL  N L  LPKEIG    L TL+L   +L  +P  +G L NL  L
Sbjct: 155 LPKEIRQLRNLQELDLNSNKLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTL 214

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L  N+L ++P+ + +                        L ++  + L  N+ TA P  
Sbjct: 215 NLLDNQLTTLPKEIGE------------------------LQNLEILVLRENRITALPKE 250

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              Q  ++  ++   NQ+  +P  I  + +NL ++++  N LT+LP ++G    L EL L
Sbjct: 251 -IGQLQNLQWLDLHQNQLTTLPKEI-GQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCL 308

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             NQ++ L ++I+ L NL VL L NN L  LP  +  L+ L+ L L  N+L +LP EIG 
Sbjct: 309 DENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQ 368

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
           L+ LQ L L SNQL +LP+ IG L NL  L + EN L + P+EI  L+NL  L+L
Sbjct: 369 LQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHL 423



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 143/404 (35%), Positives = 220/404 (54%), Gaps = 26/404 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL    +T LP  + +L +L+ L L  N L +LP +IG + NL  L L+ NSLT+LP  
Sbjct: 53  LDLRYQKLTTLPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ LDL  N+L  LPM + +L +L+ L L  N++ T+  +I+ L NL  L +  
Sbjct: 113 VGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLNS 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+  LP E+G+L+NL TL+L    L  LPKEIG    L TL+L  N+L  +P  +G L 
Sbjct: 173 NKLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  NR+ ++P+ + +  +L   ++    L++LP  +                  
Sbjct: 233 NLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEI------------------ 274

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                   Q  ++  ++   NQ+  +P  I  + +NL ++ + +N LT+LP ++     L
Sbjct: 275 -------GQLQNLQRLDLHQNQLTTLPKEI-GQLQNLQELCLDENQLTTLPKEIEQLQNL 326

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L+L  NQ++ L +++  L +L+VL L +N L  LP  IG L+ L+ L L  N+L +LP
Sbjct: 327 RVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLP 386

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            EIG L+ LQ L L  NQL + P+ I  L NL  L +  N L S
Sbjct: 387 KEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 430



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 147/397 (37%), Positives = 219/397 (55%), Gaps = 6/397 (1%)

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           T L  +L N  ++R LDLR+ KL  LP  + +L +L+ L L FN + T+  +I  L NL 
Sbjct: 38  TDLAKTLQNPLKVRTLDLRYQKLTTLPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQ 97

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L +  N +  LP E+G+L+NL  LDL  N L  LP EIG    L  LDL  N+L  +P 
Sbjct: 98  ELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPK 157

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +  L NL  L L+ N+L ++P+ + +  +L   N+    L++LP  +   L ++  + L
Sbjct: 158 EIRQLRNLQELDLNSNKLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEI-GELQNLKTLNL 216

Query: 340 SRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
             N+ T  P   G  Q   +  +    N+I  +P  I  + +NL  +++  N LT+LP +
Sbjct: 217 LDNQLTTLPKEIGELQNLEILVL--RENRITALPKEI-GQLQNLQWLDLHQNQLTTLPKE 273

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L  L+L  NQ++ L ++I  L NL+ L L  N L  LP  I  L+ L+ LDL+ 
Sbjct: 274 IGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDN 333

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L +LP E+  L+ LQ L L SN+L +LP+ IG L NL  L +  N L ++P+EIG L+
Sbjct: 334 NQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQ 393

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           NL  L L++N  L   P E+    NLQ + L   PLS
Sbjct: 394 NLQELCLDENQ-LTTFPKEIRQLKNLQELHLYLNPLS 429



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/341 (38%), Positives = 187/341 (54%), Gaps = 27/341 (7%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +R  K+  LP E+G+L+NL  LDL+ N L  LPKEIG    L  LDL  N L  +P  
Sbjct: 53  LDLRYQKLTTLPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL RL L  NRL ++P  + +  +L E ++    L++LP  +   L ++  + L+
Sbjct: 113 VGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEI-RQLRNLQELDLN 171

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            NK T  P                             + +NL  +N+    LT+LP ++G
Sbjct: 172 SNKLTTLPKE-------------------------IGQLQNLKTLNLIVTQLTTLPKEIG 206

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  LNL  NQ++ L ++I  L NLE+LVL  N +  LP  IG L+ L+ LDL +N+
Sbjct: 207 ELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQ 266

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L +LP EIG L+ LQRL L  NQL +LP+ IG L NL  L + EN L ++P+EI  L+NL
Sbjct: 267 LTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNL 326

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             L L DN  L  +P E+    +LQ+++L +  LS +P EI
Sbjct: 327 RVLDL-DNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEI 366



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 136/386 (35%), Positives = 209/386 (54%), Gaps = 26/386 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDLS +S+T LP  + +L +L+EL L  N L +LP ++G + NL  L L +N L 
Sbjct: 71  QNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLA 130

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L+ LDL  NKL  LP  + +L +L+ L L  N++ T+  +I  L NL  
Sbjct: 131 TLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLNSNKLTTLPKEIGQLQNLKT 190

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++   ++  LP E+GEL+NL TL+L  N L  LPKEIG    L  L L+ N +  +P  
Sbjct: 191 LNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKE 250

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L ++P+ + +  +L   ++    L++LP   +  L ++  + L 
Sbjct: 251 IGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKE-IGQLQNLQELCLD 309

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL  +++ +N LT+LP ++ 
Sbjct: 310 ENQLTTLPKE-------------------------IEQLQNLRVLDLDNNQLTTLPKEVL 344

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L LG+N++S L ++I  L NL+VL L +N L  LP  IG L+ L+ L L+EN+
Sbjct: 345 RLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQ 404

Query: 461 LESLPNEIGFLKELQRLILQSNQLVS 486
           L + P EI  LK LQ L L  N L S
Sbjct: 405 LTTFPKEIRQLKNLQELHLYLNPLSS 430



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/310 (35%), Positives = 182/310 (58%), Gaps = 4/310 (1%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   + TLDL++ +L  +P  +G L NL RL LS+N L ++P+ + +  +L E
Sbjct: 39  DLAKTLQNPLKVRTLDLRYQKLTTLPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQE 98

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            ++   +L++LP  +   L ++  + L +N+    P     Q  ++  ++   N++  +P
Sbjct: 99  LDLSFNSLTTLPKEV-GQLENLQRLDLHQNRLATLPME-IGQLKNLQELDLNSNKLTTLP 156

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + +NL ++++  N LT+LP ++G    L  LNL   Q++ L ++I  L NL+ L 
Sbjct: 157 KEI-RQLRNLQELDLNSNKLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLN 215

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L +N L  LP  IG L+ L+ L L EN++ +LP EIG L+ LQ L L  NQL +LP+ IG
Sbjct: 216 LLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIG 275

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L + +N L ++P+EIG L+NL  L L++N  L  +P E+    NL+++ LDN 
Sbjct: 276 QLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQ-LTTLPKEIEQLQNLRVLDLDNN 334

Query: 553 PLSQIPSEIV 562
            L+ +P E++
Sbjct: 335 QLTTLPKEVL 344


>gi|410451738|ref|ZP_11305740.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014504|gb|EKO76634.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 438

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 154/425 (36%), Positives = 224/425 (52%), Gaps = 27/425 (6%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L    +  L  +++  T +  LYL   KL +LP +IG + NL  L L +N LT++P  + 
Sbjct: 21  LDAEDVHTLNEALQNPTQVRVLYLNAKKLTALPKEIGQLQNLQGLNLWDNQLTTMPKEIG 80

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDN- 226
            LQ L+ LDL  NK+  LP  + +L SL  L L FN++ T+  +I  L +L  L +  N 
Sbjct: 81  ELQHLQKLDLGFNKITVLPNEIGQLQSLLDLNLSFNQLTTIPKEIGELQHLQRLFLGFNH 140

Query: 227 KIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           ++  LP E+G+L+NL  +D + N L  LPKEIG    L  L L  N+L  +P  +GNL N
Sbjct: 141 QLIALPKEIGKLQNLQEMDSSRNQLITLPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQN 200

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L RL L  N+L ++P+ + +                        L S+  +TLS N+   
Sbjct: 201 LQRLDLDKNQLTTIPKEIGQ------------------------LQSLQGLTLSFNQLRT 236

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P     +  ++  +    N +  IP  I    +NL  + +  N L ++P ++G    L 
Sbjct: 237 IPK-EIGKLQNLQGLTLTSNGLATIPKEI-GNLQNLKVLYLDHNKLATIPQEIGNLQSLQ 294

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L L  N ++ L ++I  L NL+ L L+ N L  LP  IGNL+ LK L+L  N+L +LP 
Sbjct: 295 VLTLDRNLLAPLPKEIGKLQNLQRLALTVNALTTLPKEIGNLQNLKELNLTSNRLTTLPK 354

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
           EIG L+ LQ L L  NQL +LP+ IG L +L YL++  N L S PEEIG L+NL  L L 
Sbjct: 355 EIGKLQNLQELHLDYNQLKTLPKEIGKLQSLEYLNLNGNPLTSFPEEIGKLQNLKVLSLV 414

Query: 527 DNTCL 531
            N  L
Sbjct: 415 GNPSL 419



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/396 (35%), Positives = 224/396 (56%), Gaps = 17/396 (4%)

Query: 193 TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLE 252
           T +++LYL   ++  +  +I  L NL  L++ DN++  +P E+GEL++L  LDL  N + 
Sbjct: 37  TQVRVLYLNAKKLTALPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQHLQKLDLGFNKIT 96

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN-RLESVPETLSKCVHLN 311
            LP EIG    L+ L+L  N+L  IP  +G L +L RL L +N +L ++P+ + K  +L 
Sbjct: 97  VLPNEIGQLQSLLDLNLSFNQLTTIPKEIGELQHLQRLFLGFNHQLIALPKEIGKLQNLQ 156

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDK 370
           E +     L +LP  +   L  +  + L+ N+ T  P   G  Q  ++  ++ + NQ+  
Sbjct: 157 EMDSSRNQLITLPKEI-GELQHLQRLFLNFNQLTTVPQEIGNLQ--NLQRLDLDKNQLTT 213

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           IP  I  + ++L  + +  N L ++P ++G    L  L L +N ++ + ++I NL NL+V
Sbjct: 214 IPKEI-GQLQSLQGLTLSFNQLRTIPKEIGKLQNLQGLTLTSNGLATIPKEIGNLQNLKV 272

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA 490
           L L +N L  +P  IGNL+ L+ L L+ N L  LP EIG L+ LQRL L  N L +LP+ 
Sbjct: 273 LYLDHNKLATIPQEIGNLQSLQVLTLDRNLLAPLPKEIGKLQNLQRLALTVNALTTLPKE 332

Query: 491 IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLD 550
           IG+L NL  L++  N L ++P+EIG L+NL  L+L+ N  L  +P E+    +L+ ++L+
Sbjct: 333 IGNLQNLKELNLTSNRLTTLPKEIGKLQNLQELHLDYNQ-LKTLPKEIGKLQSLEYLNLN 391

Query: 551 NCPLSQIPSEI----------VVGGPSLIIRYLKMQ 576
             PL+  P EI          +VG PSL  +  K+Q
Sbjct: 392 GNPLTSFPEEIGKLQNLKVLSLVGNPSLRSQKEKIQ 427



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 146/414 (35%), Positives = 223/414 (53%), Gaps = 28/414 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L+   +T LP  + +L +L+ L L+ N+L ++P +IG + +L  L L  N +T LP+ 
Sbjct: 42  LYLNAKKLTALPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQHLQKLDLGFNKITVLPNE 101

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSMLSMR 224
           +  LQ L  L+L  N+L  +P  + +L  L+ L+L FN      P +I  L NL  +   
Sbjct: 102 IGQLQSLLDLNLSFNQLTTIPKEIGELQHLQRLFLGFNHQLIALPKEIGKLQNLQEMDSS 161

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
            N++  LP E+GEL++L  L L  N L  +P+EIGN   L  LDL  N+L  IP  +G L
Sbjct: 162 RNQLITLPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQNLQRLDLDKNQLTTIPKEIGQL 221

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
            +L  L LS+N+L ++P+ + K       N++G  L+S  +GL +    I N+       
Sbjct: 222 QSLQGLTLSFNQLRTIPKEIGKLQ-----NLQGLTLTS--NGLATIPKEIGNL------- 267

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
                       ++  +  +HN++  IP  I    ++L  + +  NLL  LP ++G    
Sbjct: 268 -----------QNLKVLYLDHNKLATIPQEI-GNLQSLQVLTLDRNLLAPLPKEIGKLQN 315

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L  L L  N ++ L ++I NL NL+ L L++N L  LP  IG L+ L+ L L+ N+L++L
Sbjct: 316 LQRLALTVNALTTLPKEIGNLQNLKELNLTSNRLTTLPKEIGKLQNLQELHLDYNQLKTL 375

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLS-VGENNLQSIPEEIGTL 517
           P EIG L+ L+ L L  N L S P  IG L NL  LS VG  +L+S  E+I  L
Sbjct: 376 PKEIGKLQSLEYLNLNGNPLTSFPEEIGKLQNLKVLSLVGNPSLRSQKEKIQKL 429



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 128/384 (33%), Positives = 202/384 (52%), Gaps = 29/384 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + +T +P  + +L HL++L L  NK+  LP++IG + +L  L L+ N LT
Sbjct: 60  QNLQGLNLWDNQLTTMPKEIGELQHLQKLDLGFNKITVLPNEIGQLQSLLDLNLSFNQLT 119

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLS 219
           ++P  +  LQ L+                        L+L FN      P +I  L NL 
Sbjct: 120 TIPKEIGELQHLQR-----------------------LFLGFNHQLIALPKEIGKLQNLQ 156

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            +    N++  LP E+GEL++L  L L  N L  +P+EIGN   L  LDL  N+L  IP 
Sbjct: 157 EMDSSRNQLITLPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQNLQRLDLDKNQLTTIPK 216

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +G L +L  L LS+N+L ++P+ + K  +L    +    L+++P   + +L ++  + L
Sbjct: 217 EIGQLQSLQGLTLSFNQLRTIPKEIGKLQNLQGLTLTSNGLATIPKE-IGNLQNLKVLYL 275

Query: 340 SRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
             NK    P   G  Q  S+  +  + N +  +P  I  + +NL ++ +  N LT+LP +
Sbjct: 276 DHNKLATIPQEIGNLQ--SLQVLTLDRNLLAPLPKEI-GKLQNLQRLALTVNALTTLPKE 332

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L ELNL +N+++ L ++I  L NL+ L L  N LK LP  IG L+ L+ L+L  
Sbjct: 333 IGNLQNLKELNLTSNRLTTLPKEIGKLQNLQELHLDYNQLKTLPKEIGKLQSLEYLNLNG 392

Query: 459 NKLESLPNEIGFLKELQRLILQSN 482
           N L S P EIG L+ L+ L L  N
Sbjct: 393 NPLTSFPEEIGKLQNLKVLSLVGN 416



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 106/328 (32%), Positives = 184/328 (56%), Gaps = 5/328 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYL-YGNKLASLPSQIGYVTNLTCLGLAENSL 159
           +++L+L+LS + +T +P  + +L HL+ L+L + ++L +LP +IG + NL  +  + N L
Sbjct: 106 QSLLDLNLSFNQLTTIPKEIGELQHLQRLFLGFNHQLIALPKEIGKLQNLQEMDSSRNQL 165

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
            +LP  +  LQ L+ L L  N+L  +P  +  L +L+ L L  N++ T+  +I  L +L 
Sbjct: 166 ITLPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQNLQRLDLDKNQLTTIPKEIGQLQSLQ 225

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L++  N++R +P E+G+L+NL  L L  N L  +PKEIGN   L  L L HN+L  IP 
Sbjct: 226 GLTLSFNQLRTIPKEIGKLQNLQGLTLTSNGLATIPKEIGNLQNLKVLYLDHNKLATIPQ 285

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +GNL +L  L L  N L  +P+ + K  +L    +   AL++LP   + +L ++  + L
Sbjct: 286 EIGNLQSLQVLTLDRNLLAPLPKEIGKLQNLQRLALTVNALTTLPKE-IGNLQNLKELNL 344

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           + N+ T  P     +  ++  ++ ++NQ+  +P  I  + ++L  +N+  N LTS P ++
Sbjct: 345 TSNRLTTLPK-EIGKLQNLQELHLDYNQLKTLPKEI-GKLQSLEYLNLNGNPLTSFPEEI 402

Query: 400 GTWVGLTELNL-GTNQISKLSEDIQNLV 426
           G    L  L+L G   +    E IQ L+
Sbjct: 403 GKLQNLKVLSLVGNPSLRSQKEKIQKLL 430



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/250 (36%), Positives = 143/250 (57%), Gaps = 1/250 (0%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  +D S++ +  LP  + +L HL+ L+L  N+L ++P +IG + NL  L L +N 
Sbjct: 151 KLQNLQEMDSSRNQLITLPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQNLQRLDLDKNQ 210

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT++P  +  LQ L+ L L  N+L  +P  + KL +L+ L L  N + T+  +I  L NL
Sbjct: 211 LTTIPKEIGQLQSLQGLTLSFNQLRTIPKEIGKLQNLQGLTLTSNGLATIPKEIGNLQNL 270

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            +L +  NK+  +P E+G L++L  L L  N L  LPKEIG    L  L L  N L  +P
Sbjct: 271 KVLYLDHNKLATIPQEIGNLQSLQVLTLDRNLLAPLPKEIGKLQNLQRLALTVNALTTLP 330

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +GNL NL  L L+ NRL ++P+ + K  +L E +++   L +LP   +  L S+  + 
Sbjct: 331 KEIGNLQNLKELNLTSNRLTTLPKEIGKLQNLQELHLDYNQLKTLPKE-IGKLQSLEYLN 389

Query: 339 LSRNKFTAYP 348
           L+ N  T++P
Sbjct: 390 LNGNPLTSFP 399



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 160/303 (52%), Gaps = 28/303 (9%)

Query: 260 NCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA 319
           N T +  L L   +L  +P  +G L NL  L L  N+L ++P+ + +  HL + ++    
Sbjct: 35  NPTQVRVLYLNAKKLTALPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQHLQKLDLGFNK 94

Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSR 378
           ++ LP+ +   L S+ ++ LS N+ T  P   G  Q      + F H             
Sbjct: 95  ITVLPNEI-GQLQSLLDLNLSFNQLTTIPKEIGELQHLQRLFLGFNHQ------------ 141

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
                        L +LP ++G    L E++   NQ+  L ++I  L +L+ L L+ N L
Sbjct: 142 -------------LIALPKEIGKLQNLQEMDSSRNQLITLPKEIGELQHLQRLFLNFNQL 188

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
             +P  IGNL+ L+ LDL++N+L ++P EIG L+ LQ L L  NQL ++P+ IG L NL 
Sbjct: 189 TTVPQEIGNLQNLQRLDLDKNQLTTIPKEIGQLQSLQGLTLSFNQLRTIPKEIGKLQNLQ 248

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L++  N L +IP+EIG L+NL  LYL D+  L  IP E+    +LQ+++LD   L+ +P
Sbjct: 249 GLTLTSNGLATIPKEIGNLQNLKVLYL-DHNKLATIPQEIGNLQSLQVLTLDRNLLAPLP 307

Query: 559 SEI 561
            EI
Sbjct: 308 KEI 310



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 85/147 (57%)

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +  L+E +QN   + VL L+   L  LP  IG L+ L+ L+L +N+L ++P EIG L+ L
Sbjct: 26  VHTLNEALQNPTQVRVLYLNAKKLTALPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQHL 85

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           Q+L L  N++  LP  IG L +L  L++  N L +IP+EIG L++L  L+L  N  L  +
Sbjct: 86  QKLDLGFNKITVLPNEIGQLQSLLDLNLSFNQLTTIPKEIGELQHLQRLFLGFNHQLIAL 145

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEI 561
           P E+    NLQ M      L  +P EI
Sbjct: 146 PKEIGKLQNLQEMDSSRNQLITLPKEI 172


>gi|256396794|ref|YP_003118358.1| phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
 gi|256363020|gb|ACU76517.1| Phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
          Length = 1263

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 171/506 (33%), Positives = 245/506 (48%), Gaps = 42/506 (8%)

Query: 90  NIEKEFLRCKEEN-ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
            +  EF R  E   +  L+LS + +  LP ++ ++T L  L+L  N    LP Q+  +  
Sbjct: 35  GLPAEFGRLPELGPVTFLNLSGNRLATLPETLGEVTGLRRLWLDSNGFGELPPQVALLGG 94

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK-- 206
           L  L L  N LT+LP+  A L++L  L L  N    LP VV  L+SL  LYL+ N++   
Sbjct: 95  LVELSLTGNGLTTLPEEFARLERLTSLWLDENAFTALPEVVGHLSSLTQLYLQKNQLPGL 154

Query: 207 -------TVH------------PD-IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDL 246
                  ++H            PD I    +L  LS  DN + ELPP +G L  L  L L
Sbjct: 155 PDSLGAPSLHTLVLDGNHLAELPDWIGDTQSLVALSADDNVLTELPPSIGALIRLQELSL 214

Query: 247 AHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK 306
             N L +LP  IG+   L  L LQ N+L  +P  +GNL  L  L LS N LE +P +++ 
Sbjct: 215 TGNRLRKLPTSIGDMASLTKLYLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVAD 274

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT--QFTSVYSINFE 364
              L E N+    L+ +P+ +   L S++ ++L+ N+ T  P   P+      + +++  
Sbjct: 275 LSRLTELNLADNWLTHVPEAI-GRLASLDKLSLTYNRLTELP---PSLGALRVLTALDVS 330

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN 424
            N +  +P   F    NL  +N+  N LTSLP  +G    LT L+L    +  L   +  
Sbjct: 331 RNSLHDLPDS-FDGLANLDTLNLAQNPLTSLPSSVGALKRLTWLSLAYCDLETLPAGLGG 389

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           L  LE L L  N L+ LP  +  L  L  L+L  N+L  +P  +G L+ L  L L  N+L
Sbjct: 390 LHRLETLDLVGNNLRDLPFQLSGLGALTTLNLASNQLSWVPRTLGLLRNLVNLDLADNEL 449

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
            SLPRA+G L +L  L V EN L  IP  +  L  L TL L  N  L ++P      SN 
Sbjct: 450 SSLPRALGGLESLRKLDVAENQLTWIPRSVCDLPKLETLVLRGNR-LADLP-----TSNW 503

Query: 545 QIMSL------DNCPLSQIPSEIVVG 564
           Q ++L      DN  LS +P    VG
Sbjct: 504 QKLTLKELDLSDNPLLSAVPENWDVG 529



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 138/443 (31%), Positives = 229/443 (51%), Gaps = 32/443 (7%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
            ++ L L+ + +T LP    +L  L  L+L  N   +LP  +G++++LT L L +N L  
Sbjct: 94  GLVELSLTGNGLTTLPEEFARLERLTSLWLDENAFTALPEVVGHLSSLTQLYLQKNQLPG 153

Query: 162 LPDSL----------------------ANLQQLRVLDLRHNKLNELPMVVYKLTSLKILY 199
           LPDSL                       + Q L  L    N L ELP  +  L  L+ L 
Sbjct: 154 LPDSLGAPSLHTLVLDGNHLAELPDWIGDTQSLVALSADDNVLTELPPSIGALIRLQELS 213

Query: 200 LRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIG 259
           L  NR++ +   I  +++L+ L ++ N+++ LP  +G L  L TL L+ NHLEELP  + 
Sbjct: 214 LTGNRLRKLPTSIGDMASLTKLYLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVA 273

Query: 260 NCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA 319
           + + L  L+L  N L ++P+ +G L +L +L L+YNRL  +P +L     L   +V   +
Sbjct: 274 DLSRLTELNLADNWLTHVPEAIGRLASLDKLSLTYNRLTELPPSLGALRVLTALDVSRNS 333

Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFS 377
           L  LPD     L +++ + L++N  T+ PS  G   + T    ++  +  ++ +P G+  
Sbjct: 334 LHDLPDS-FDGLANLDTLNLAQNPLTSLPSSVGALKRLT---WLSLAYCDLETLPAGLGG 389

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
             + L  +++  N L  LP  L     LT LNL +NQ+S +   +  L NL  L L++N 
Sbjct: 390 LHR-LETLDLVGNNLRDLPFQLSGLGALTTLNLASNQLSWVPRTLGLLRNLVNLDLADNE 448

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L  LP ++G L  L+ LD+ EN+L  +P  +  L +L+ L+L+ N+L  LP +      L
Sbjct: 449 LSSLPRALGGLESLRKLDVAENQLTWIPRSVCDLPKLETLVLRGNRLADLPTSNWQKLTL 508

Query: 498 SYLSVGENN-LQSIPE--EIGTL 517
             L + +N  L ++PE  ++GT+
Sbjct: 509 KELDLSDNPLLSAVPENWDVGTM 531



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 143/452 (31%), Positives = 218/452 (48%), Gaps = 31/452 (6%)

Query: 136 LASLPSQIGYVTNL---TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVY-- 190
           L  LP++ G +  L   T L L+ N L +LP++L  +  LR L L  N   ELP  V   
Sbjct: 33  LTGLPAEFGRLPELGPVTFLNLSGNRLATLPETLGEVTGLRRLWLDSNGFGELPPQVALL 92

Query: 191 -----------KLTSLKILYLRFNRIKTVHPD----------IQYLSNLSMLSMRDNKIR 229
                       LT+L   + R  R+ ++  D          + +LS+L+ L ++ N++ 
Sbjct: 93  GGLVELSLTGNGLTTLPEEFARLERLTSLWLDENAFTALPEVVGHLSSLTQLYLQKNQLP 152

Query: 230 ELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTR 289
            LP  LG   +L TL L  NHL ELP  IG+   LV L    N L  +P  +G LI L  
Sbjct: 153 GLPDSLGA-PSLHTLVLDGNHLAELPDWIGDTQSLVALSADDNVLTELPPSIGALIRLQE 211

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS 349
           L L+ NRL  +P ++     L +  ++   L +LP   + +L+ +  + LS N     P+
Sbjct: 212 LSLTGNRLRKLPTSIGDMASLTKLYLQKNQLQTLP-ASIGNLSELQTLALSGNHLEELPA 270

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
                 + +  +N   N +  +P  I  R  +L K+++  N LT LP  LG    LT L+
Sbjct: 271 -SVADLSRLTELNLADNWLTHVPEAI-GRLASLDKLSLTYNRLTELPPSLGALRVLTALD 328

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           +  N +  L +    L NL+ L L+ N L  LPSS+G L++L  L L    LE+LP  +G
Sbjct: 329 VSRNSLHDLPDSFDGLANLDTLNLAQNPLTSLPSSVGALKRLTWLSLAYCDLETLPAGLG 388

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            L  L+ L L  N L  LP  +  L  L+ L++  N L  +P  +G L NL  L L DN 
Sbjct: 389 GLHRLETLDLVGNNLRDLPFQLSGLGALTTLNLASNQLSWVPRTLGLLRNLVNLDLADNE 448

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L+++P  L    +L+ + +    L+ IP  +
Sbjct: 449 -LSSLPRALGGLESLRKLDVAENQLTWIPRSV 479



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 207/417 (49%), Gaps = 12/417 (2%)

Query: 147 TNLTCLGLAENSLTSLPDSLANLQQL---RVLDLRHNKLNELPMVVYKLTSLKILYLRFN 203
           T    L L+   LT LP     L +L     L+L  N+L  LP  + ++T L+ L+L  N
Sbjct: 21  TGEVGLDLSNLGLTGLPAEFGRLPELGPVTFLNLSGNRLATLPETLGEVTGLRRLWLDSN 80

Query: 204 RIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTM 263
               + P +  L  L  LS+  N +  LP E   L+ L +L L  N    LP+ +G+ + 
Sbjct: 81  GFGELPPQVALLGGLVELSLTGNGLTTLPEEFARLERLTSLWLDENAFTALPEVVGHLSS 140

Query: 264 LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSL 323
           L  L LQ N+L  +PD LG   +L  L L  N L  +P+ +     L   + +   L+ L
Sbjct: 141 LTQLYLQKNQLPGLPDSLG-APSLHTLVLDGNHLAELPDWIGDTQSLVALSADDNVLTEL 199

Query: 324 PDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
           P   + +L  +  ++L+ N+    P+  G     T +Y    + NQ+  +P  I + ++ 
Sbjct: 200 PPS-IGALIRLQELSLTGNRLRKLPTSIGDMASLTKLY---LQKNQLQTLPASIGNLSE- 254

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           L  + +  N L  LP  +     LTELNL  N ++ + E I  L +L+ L L+ N L +L
Sbjct: 255 LQTLALSGNHLEELPASVADLSRLTELNLADNWLTHVPEAIGRLASLDKLSLTYNRLTEL 314

Query: 442 PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLS 501
           P S+G LR L  LD+  N L  LP+    L  L  L L  N L SLP ++G L  L++LS
Sbjct: 315 PPSLGALRVLTALDVSRNSLHDLPDSFDGLANLDTLNLAQNPLTSLPSSVGALKRLTWLS 374

Query: 502 VGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           +   +L+++P  +G L  L TL L  N  L ++PF+L+    L  ++L +  LS +P
Sbjct: 375 LAYCDLETLPAGLGGLHRLETLDLVGNN-LRDLPFQLSGLGALTTLNLASNQLSWVP 430



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 75/159 (47%), Gaps = 2/159 (1%)

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
           VGL   NLG   +      +  L  +  L LS N L  LP ++G +  L+ L L+ N   
Sbjct: 24  VGLDLSNLGLTGLPAEFGRLPELGPVTFLNLSGNRLATLPETLGEVTGLRRLWLDSNGFG 83

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP ++  L  L  L L  N L +LP     L  L+ L + EN   ++PE +G L +L  
Sbjct: 84  ELPPQVALLGGLVELSLTGNGLTTLPEEFARLERLTSLWLDENAFTALPEVVGHLSSLTQ 143

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           LYL  N  L  +P  L   S L  + LD   L+++P  I
Sbjct: 144 LYLQKNQ-LPGLPDSLGAPS-LHTLVLDGNHLAELPDWI 180


>gi|417764010|ref|ZP_12411983.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353842|gb|EJP05995.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 427

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 137/394 (34%), Positives = 224/394 (56%), Gaps = 26/394 (6%)

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           KL +LP +IG + NL  L L++N L  LP  +  L+ L++LDL  N+L  LP  + +L +
Sbjct: 38  KLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIILPKEIRQLKN 97

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L++L LR N++  +  +I  L NL  L + +N++   P E+G+L+ L  L+L+ N ++ +
Sbjct: 98  LQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTI 157

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           PKEI     L +L L +N+L  +P  +G L  L  L LSYN+++++P+ + K   L    
Sbjct: 158 PKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLY 217

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +    L++LP  +                          +   + S+  ++NQ+  +P  
Sbjct: 218 LHKNQLTTLPQEI-------------------------EKLQKLESLGLDNNQLTTLPQE 252

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           I  + +NL  + + +N LT++P ++G    L +L L +NQ++ + ++I  L NL++L L 
Sbjct: 253 I-GQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLG 311

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
           NN L  LP  IG L+ L+ L L  N+L ++P EIG L+ LQ L L +NQL ++P+ IG L
Sbjct: 312 NNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQL 371

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            NL  L +  N L +IP+EIG L+NL TLYL +N
Sbjct: 372 QNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 405



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 144/395 (36%), Positives = 217/395 (54%), Gaps = 4/395 (1%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L  +L N   +RVLDL   KL  LP  + +L +L++L L  N++  +  +I+ L NL M
Sbjct: 18  DLTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQM 77

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN++  LP E+ +LKNL  LDL  N L  LPKEIG    L  L L +N+L   P  
Sbjct: 78  LDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKE 137

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L  L  L LS N+++++P+ + K   L    +    L++LP   +  L  +  + LS
Sbjct: 138 IGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQE-IGKLQKLQWLNLS 196

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P     +   +  +    NQ+  +P  I  + + L  + + +N LT+LP ++G
Sbjct: 197 YNQIKTLPQ-EIEKLQKLQWLYLHKNQLTTLPQEI-EKLQKLESLGLDNNQLTTLPQEIG 254

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L L  NQ++ + ++I +L NL+ L L +N L  +P  IG L+ L+ LDL  N+
Sbjct: 255 QLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQ 314

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L  LP EIG L+ LQ L L +NQL ++P+ IG L NL  L +  N L +IP+EIG L+NL
Sbjct: 315 LTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNL 374

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
             LYL++N  +  IP E+    NLQ + L N   S
Sbjct: 375 QELYLSNNQLI-TIPKEIGQLQNLQTLYLRNNQFS 408



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 144/409 (35%), Positives = 223/409 (54%), Gaps = 29/409 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + +L +L+ L L  N+L  LP +I  + NL  L L++N L  LP  
Sbjct: 32  LDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIILPKE 91

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L++LDLR N+L  LP  + KL +L+ LYL  N++ T                  
Sbjct: 92  IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTT------------------ 133

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
                 P E+G+L+ L  L+L+ N ++ +PKEI     L +L L +N+L  +P  +G L 
Sbjct: 134 -----FPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQ 188

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LSYN+++++P+ + K   L    +    L++LP   +  L  + ++ L  N+ T
Sbjct: 189 KLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQE-IEKLQKLESLGLDNNQLT 247

Query: 346 AYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
             P   G  Q   V  +N  +NQ+  IP  I    +NL  + +  N LT++P ++G    
Sbjct: 248 TLPQEIGQLQNLKVLFLN--NNQLTTIPQEI-GHLQNLQDLYLVSNQLTTIPKEIGQLQN 304

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L  L+LG NQ++ L ++I  L NL+ L LSNN L  +P  IG L+ L+ L L  N+L ++
Sbjct: 305 LQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTI 364

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           P EIG L+ LQ L L +NQL+++P+ IG L NL  L +  NN  SI E+
Sbjct: 365 PKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYL-RNNQFSIEEK 412



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 202/384 (52%), Gaps = 26/384 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDLS + +  LP  + +L +L+ L L  N+L  LP +I  + NL  L L  N LT
Sbjct: 50  KNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLT 109

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L L +N+L   P  + KL  L+ L L  N+IKT+  +I+ L  L  
Sbjct: 110 ILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQS 169

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++  LP E+G+L+ L  L+L++N ++ LP+EI     L  L L  N+L  +P  
Sbjct: 170 LYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQE 229

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  L  L L  N+L ++P+ + +  +L    +    L+++P   +  L ++ ++ L 
Sbjct: 230 IEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQE-IGHLQNLQDLYLV 288

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL  +++ +N LT LP ++G
Sbjct: 289 SNQLTTIPKE-------------------------IGQLQNLQMLDLGNNQLTILPKEIG 323

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L EL L  NQ++ + ++I  L NL+ L LSNN L  +P  IG L+ L+ L L  N+
Sbjct: 324 KLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQ 383

Query: 461 LESLPNEIGFLKELQRLILQSNQL 484
           L ++P EIG L+ LQ L L++NQ 
Sbjct: 384 LITIPKEIGQLQNLQTLYLRNNQF 407



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/356 (33%), Positives = 173/356 (48%), Gaps = 50/356 (14%)

Query: 252 EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN 311
           ++L K + N   +  LDL   +L  +P  +G L NL  L LS N+L  +P+ + +  +L 
Sbjct: 17  QDLTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQ 76

Query: 312 EFNVEGCALSSLPDGL----------------------LSSLTSINNITLSRNKFTAYPS 349
             ++    L  LP  +                      +  L ++  + LS N+ T +P 
Sbjct: 77  MLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPK 136

Query: 350 G-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
             G  Q   +  +N   NQI  IP  I  + + L  + + +N LT+LP ++G    L  L
Sbjct: 137 EIGKLQ--KLQWLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWL 193

Query: 409 NLGTNQI-----------------------SKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           NL  NQI                       + L ++I+ L  LE L L NN L  LP  I
Sbjct: 194 NLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEI 253

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
           G L+ LK L L  N+L ++P EIG L+ LQ L L SNQL ++P+ IG L NL  L +G N
Sbjct: 254 GQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNN 313

Query: 506 NLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L  +P+EIG L+NL  LYL++N  L  IP E+    NLQ + L N  L+ IP EI
Sbjct: 314 QLTILPKEIGKLQNLQELYLSNNQ-LTTIPKEIGQLQNLQELYLSNNQLTTIPKEI 368


>gi|113477255|ref|YP_723316.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
 gi|110168303|gb|ABG52843.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
          Length = 1041

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 151/395 (38%), Positives = 216/395 (54%), Gaps = 26/395 (6%)

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
           K   L+ LYL G KL  +P  +  +  L  L L  N LTSLP+S+  L  L  L L +NK
Sbjct: 24  KYQKLKWLYLSGCKLTEVPGDVWELEQLEVLDLGSNELTSLPESIGKLSNLTSLYLVNNK 83

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L  LP  + KL++L  LYL  N++ ++   I  LSNL+ L +  NK+  LP  +G+L NL
Sbjct: 84  LTSLPESITKLSNLTELYLDGNQLTSLPESITKLSNLTELYLSVNKLTSLPESIGKLSNL 143

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
            +LDL  N L  LP+ I   + L  L L HN+L ++P+ +  L NLT L L +N+L S+P
Sbjct: 144 TSLDLGGNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTELYLGHNQLTSLP 203

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
           E+++K  +L   ++    L+SLP+    S+T ++N+T                     S+
Sbjct: 204 ESITKLSNLTSLDLSWNKLTSLPE----SITKLSNLT---------------------SL 238

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
               NQ+  +P  I + + NL+ +++  N LTS+P  +     LTEL L  NQ+++L E 
Sbjct: 239 YLGSNQLTSLPESITTLS-NLTVLDLGSNQLTSMPESITKLSNLTELYLDGNQLTRLPES 297

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           I  L NL  L L NN L +LP SI  L  L  L+L  NKL SLP  IG L  L  L L+ 
Sbjct: 298 ITKLSNLTKLDLRNNQLTRLPESITKLSNLTKLNLSWNKLTSLPESIGKLSNLTSLYLRD 357

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
           NQL  LP +I  L+NL +L +  N L++ P EI T
Sbjct: 358 NQLTILPESITTLSNLGWLYLNNNPLENPPIEIAT 392



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 153/393 (38%), Positives = 218/393 (55%), Gaps = 31/393 (7%)

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L L+   LT +P  +  L+QL VLDL  N+L  LP  + KL++L  LYL  N++ ++
Sbjct: 28  LKWLYLSGCKLTEVPGDVWELEQLEVLDLGSNELTSLPESIGKLSNLTSLYLVNNKLTSL 87

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
              I  LSNL+ L +  N++  LP  + +L NL  L L+ N L  LP+ IG  + L +LD
Sbjct: 88  PESITKLSNLTELYLDGNQLTSLPESITKLSNLTELYLSVNKLTSLPESIGKLSNLTSLD 147

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL- 327
           L  N+L ++P+ +  L NLT L L +N+L S+PE+++K  +L E  +    L+SLP+ + 
Sbjct: 148 LGGNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTELYLGHNQLTSLPESIT 207

Query: 328 -LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
            LS+LTS++   LS NK T+ P                            ++  NL+ + 
Sbjct: 208 KLSNLTSLD---LSWNKLTSLPES-------------------------ITKLSNLTSLY 239

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           +  N LTSLP  + T   LT L+LG+NQ++ + E I  L NL  L L  N L +LP SI 
Sbjct: 240 LGSNQLTSLPESITTLSNLTVLDLGSNQLTSMPESITKLSNLTELYLDGNQLTRLPESIT 299

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            L  L  LDL  N+L  LP  I  L  L +L L  N+L SLP +IG L+NL+ L + +N 
Sbjct: 300 KLSNLTKLDLRNNQLTRLPESITKLSNLTKLNLSWNKLTSLPESIGKLSNLTSLYLRDNQ 359

Query: 507 LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
           L  +PE I TL NL  LYLN+N  L N P E+A
Sbjct: 360 LTILPESITTLSNLGWLYLNNN-PLENPPIEIA 391



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 143/386 (37%), Positives = 215/386 (55%), Gaps = 4/386 (1%)

Query: 191 KLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
           K   LK LYL   ++  V  D+  L  L +L +  N++  LP  +G+L NL +L L +N 
Sbjct: 24  KYQKLKWLYLSGCKLTEVPGDVWELEQLEVLDLGSNELTSLPESIGKLSNLTSLYLVNNK 83

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           L  LP+ I   + L  L L  N+L ++P+ +  L NLT L LS N+L S+PE++ K  +L
Sbjct: 84  LTSLPESITKLSNLTELYLDGNQLTSLPESITKLSNLTELYLSVNKLTSLPESIGKLSNL 143

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK 370
              ++ G  L+SLP+ + + L+++  + L  N+ T+ P    T+ +++  +   HNQ+  
Sbjct: 144 TSLDLGGNQLTSLPESI-TKLSNLTELYLGHNQLTSLPES-ITKLSNLTELYLGHNQLTS 201

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           +P  I ++  NL+ +++  N LTSLP  +     LT L LG+NQ++ L E I  L NL V
Sbjct: 202 LPESI-TKLSNLTSLDLSWNKLTSLPESITKLSNLTSLYLGSNQLTSLPESITTLSNLTV 260

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA 490
           L L +N L  +P SI  L  L  L L+ N+L  LP  I  L  L +L L++NQL  LP +
Sbjct: 261 LDLGSNQLTSMPESITKLSNLTELYLDGNQLTRLPESITKLSNLTKLDLRNNQLTRLPES 320

Query: 491 IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLD 550
           I  L+NL+ L++  N L S+PE IG L NL +LYL DN  L  +P  +   SNL  + L+
Sbjct: 321 ITKLSNLTKLNLSWNKLTSLPESIGKLSNLTSLYLRDNQ-LTILPESITTLSNLGWLYLN 379

Query: 551 NCPLSQIPSEIVVGGPSLIIRYLKMQ 576
           N PL   P EI   G   I  Y + +
Sbjct: 380 NNPLENPPIEIATKGIQEIRDYFQQE 405



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 150/420 (35%), Positives = 233/420 (55%), Gaps = 16/420 (3%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           +++K     K + +  L LS   +T +P  V +L  LE L L  N+L SLP  IG ++NL
Sbjct: 15  DVKKRIQEAKYQKLKWLYLSGCKLTEVPGDVWELEQLEVLDLGSNELTSLPESIGKLSNL 74

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
           T L L  N LTSLP+S+  L  L  L L  N+L  LP  + KL++L  LYL  N++ ++ 
Sbjct: 75  TSLYLVNNKLTSLPESITKLSNLTELYLDGNQLTSLPESITKLSNLTELYLSVNKLTSLP 134

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
             I  LSNL+ L +  N++  LP  + +L NL  L L HN L  LP+ I   + L  L L
Sbjct: 135 ESIGKLSNLTSLDLGGNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTELYL 194

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
            HN+L ++P+ +  L NLT L LS+N+L S+PE+++K  +L    +    L+SLP+    
Sbjct: 195 GHNQLTSLPESITKLSNLTSLDLSWNKLTSLPESITKLSNLTSLYLGSNQLTSLPE---- 250

Query: 330 SLTSINNIT---LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
           S+T+++N+T   L  N+ T+ P    T+ +++  +  + NQ+ ++P  I ++  NL+K++
Sbjct: 251 SITTLSNLTVLDLGSNQLTSMPE-SITKLSNLTELYLDGNQLTRLPESI-TKLSNLTKLD 308

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           +++N LT LP  +     LT+LNL  N+++ L E I  L NL  L L +N L  LP SI 
Sbjct: 309 LRNNQLTRLPESITKLSNLTKLNLSWNKLTSLPESIGKLSNLTSLYLRDNQLTILPESIT 368

Query: 447 NLRKLKCLDLEENKLESLPNEIGF--LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
            L  L  L L  N LE+ P EI    ++E++    Q  +     + I ++     L VGE
Sbjct: 369 TLSNLGWLYLNNNPLENPPIEIATKGIQEIRDYFQQERE-----KGIDYIYEAKLLIVGE 423


>gi|418728103|ref|ZP_13286683.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777148|gb|EKR57116.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 447

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 137/394 (34%), Positives = 224/394 (56%), Gaps = 26/394 (6%)

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           KL +LP +IG + NL  L L++N L  LP  +  L+ L++LDL  N+L  LP  + +L +
Sbjct: 58  KLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIILPKEIRQLKN 117

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L++L LR N++  +  +I  L NL  L + +N++   P E+G+L+ L  L+L+ N ++ +
Sbjct: 118 LQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTI 177

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           PKEI     L +L L +N+L  +P  +G L  L  L LSYN+++++P+ + K   L    
Sbjct: 178 PKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLY 237

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +    L++LP  +                          +   + S+  ++NQ+  +P  
Sbjct: 238 LHKNQLTTLPQEI-------------------------EKLQKLESLGLDNNQLTTLPQE 272

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           I  + +NL  + + +N LT++P ++G    L +L L +NQ++ + ++I  L NL++L L 
Sbjct: 273 I-GQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLG 331

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
           NN L  LP  IG L+ L+ L L  N+L ++P EIG L+ LQ L L +NQL ++P+ IG L
Sbjct: 332 NNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQL 391

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            NL  L +  N L +IP+EIG L+NL TLYL +N
Sbjct: 392 QNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 425



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 148/414 (35%), Positives = 225/414 (54%), Gaps = 7/414 (1%)

Query: 145 YVTNLTCLGLA---ENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
           ++ NL+C   A     +   L  +L N   +RVLDL   KL  LP  + +L +L++L L 
Sbjct: 19  FLMNLSCEIQACEEPGTYQDLTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLS 78

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N++  +  +I+ L NL ML + DN++  LP E+ +LKNL  LDL  N L  LPKEIG  
Sbjct: 79  DNQLIILPKEIRQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKL 138

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L  L L +N+L   P  +G L  L  L LS N+++++P+ + K   L    +    L+
Sbjct: 139 QNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLT 198

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
           +LP   +  L  +  + LS N+    P     +   +  +    NQ+  +P  I  + + 
Sbjct: 199 TLPQE-IGKLQKLQWLNLSYNQIKTLPQ-EIEKLQKLQWLYLHKNQLTTLPQEI-EKLQK 255

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           L  + + +N LT+LP ++G    L  L L  NQ++ + ++I +L NL+ L L +N L  +
Sbjct: 256 LESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTI 315

Query: 442 PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLS 501
           P  IG L+ L+ LDL  N+L  LP EIG L+ LQ L L +NQL ++P+ IG L NL  L 
Sbjct: 316 PKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELY 375

Query: 502 VGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           +  N L +IP+EIG L+NL  LYL++N  +  IP E+    NLQ + L N   S
Sbjct: 376 LSNNQLTTIPKEIGQLQNLQELYLSNNQLI-TIPKEIGQLQNLQTLYLRNNQFS 428



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 144/409 (35%), Positives = 223/409 (54%), Gaps = 29/409 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + +L +L+ L L  N+L  LP +I  + NL  L L++N L  LP  
Sbjct: 52  LDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIILPKE 111

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L++LDLR N+L  LP  + KL +L+ LYL  N++ T                  
Sbjct: 112 IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTT------------------ 153

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
                 P E+G+L+ L  L+L+ N ++ +PKEI     L +L L +N+L  +P  +G L 
Sbjct: 154 -----FPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQ 208

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LSYN+++++P+ + K   L    +    L++LP   +  L  + ++ L  N+ T
Sbjct: 209 KLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQE-IEKLQKLESLGLDNNQLT 267

Query: 346 AYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
             P   G  Q   V  +N  +NQ+  IP  I    +NL  + +  N LT++P ++G    
Sbjct: 268 TLPQEIGQLQNLKVLFLN--NNQLTTIPQEI-GHLQNLQDLYLVSNQLTTIPKEIGQLQN 324

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L  L+LG NQ++ L ++I  L NL+ L LSNN L  +P  IG L+ L+ L L  N+L ++
Sbjct: 325 LQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTI 384

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           P EIG L+ LQ L L +NQL+++P+ IG L NL  L +  NN  SI E+
Sbjct: 385 PKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYL-RNNQFSIEEK 432



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 133/368 (36%), Positives = 192/368 (52%), Gaps = 27/368 (7%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
            +++L L   ++K +   I  L NL ML + DN++  LP E+ +LKNL  LDL+ N L  
Sbjct: 48  DVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLII 107

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LPKEI     L  LDL+ N+L  +P  +G L NL  L LS N+L + P+ + K   L   
Sbjct: 108 LPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWL 167

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           N+    + ++P  +   L  + ++ L  N+ T  P                         
Sbjct: 168 NLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQE----------------------- 203

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
               + + L  +N+  N + +LP ++     L  L L  NQ++ L ++I+ L  LE L L
Sbjct: 204 --IGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGL 261

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
            NN L  LP  IG L+ LK L L  N+L ++P EIG L+ LQ L L SNQL ++P+ IG 
Sbjct: 262 DNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQ 321

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L NL  L +G N L  +P+EIG L+NL  LYL++N  L  IP E+    NLQ + L N  
Sbjct: 322 LQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQ-LTTIPKEIGQLQNLQELYLSNNQ 380

Query: 554 LSQIPSEI 561
           L+ IP EI
Sbjct: 381 LTTIPKEI 388



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 202/384 (52%), Gaps = 26/384 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDLS + +  LP  + +L +L+ L L  N+L  LP +I  + NL  L L  N LT
Sbjct: 70  KNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLT 129

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L L +N+L   P  + KL  L+ L L  N+IKT+  +I+ L  L  
Sbjct: 130 ILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQS 189

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++  LP E+G+L+ L  L+L++N ++ LP+EI     L  L L  N+L  +P  
Sbjct: 190 LYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQE 249

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  L  L L  N+L ++P+ + +  +L    +    L+++P   +  L ++ ++ L 
Sbjct: 250 IEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQE-IGHLQNLQDLYLV 308

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL  +++ +N LT LP ++G
Sbjct: 309 SNQLTTIPKE-------------------------IGQLQNLQMLDLGNNQLTILPKEIG 343

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L EL L  NQ++ + ++I  L NL+ L LSNN L  +P  IG L+ L+ L L  N+
Sbjct: 344 KLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQ 403

Query: 461 LESLPNEIGFLKELQRLILQSNQL 484
           L ++P EIG L+ LQ L L++NQ 
Sbjct: 404 LITIPKEIGQLQNLQTLYLRNNQF 427


>gi|417763987|ref|ZP_12411960.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353819|gb|EJP05972.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 452

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 143/374 (38%), Positives = 209/374 (55%), Gaps = 3/374 (0%)

Query: 152 LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD 211
           L L    LT LP  +  LQ L+ LDL  N L  LP  + +L +L+ L L FN + T+  +
Sbjct: 53  LDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
           +  L NL  L +  N++  LP E+G+LKNL  LDL  N L  LPKEI     L  LDL  
Sbjct: 113 VGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHR 172

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           N+L  +P  +G L NL  L L   +L ++P+ + +  +L   N+    L++LP  +   L
Sbjct: 173 NQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI-GEL 231

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
            ++  + L  N+ TA P     Q  ++  ++   NQ+  +P  I  + +NL ++++  N 
Sbjct: 232 QNLEILVLRENRITALPKE-IGQLQNLQWLDLHQNQLTILPKEI-GQLQNLQRLDLHQNQ 289

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           LT+LP ++G    L EL L  NQ++ L ++I+ L NL VL L NN L  LP  +  L+ L
Sbjct: 290 LTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSL 349

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           + L L  N+L +LP EIG L+ LQ L L SNQL +LP+ IG L NL  L + EN L + P
Sbjct: 350 QVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQLTTFP 409

Query: 512 EEIGTLENLHTLYL 525
           +EI  L+NL  L+L
Sbjct: 410 KEIRQLKNLQELHL 423



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/404 (35%), Positives = 218/404 (53%), Gaps = 26/404 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL    +T LP  + +L +L+ L L  N L  LP +IG + NL  L L+ NSLT+LP  
Sbjct: 53  LDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ LDL  N+L  LPM + +L +L+ L L  N++ T+  +I+ L NL  L +  
Sbjct: 113 VGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHR 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L+NL TL+L    L  LPKEIG    L TL+L  N+L  +P  +G L 
Sbjct: 173 NQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  NR+ ++P+ + +  +L   ++    L+ LP  +                  
Sbjct: 233 NLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEI------------------ 274

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                   Q  ++  ++   NQ+  +P  I  + +NL ++ + +N LT+LP ++     L
Sbjct: 275 -------GQLQNLQRLDLHQNQLTTLPKEI-GQLQNLQELCLDENQLTTLPKEIEQLQNL 326

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L+L  NQ++ L +++  L +L+VL L +N L  LP  IG L+ L+ L L  N+L +LP
Sbjct: 327 RVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTTLP 386

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            EIG L+ LQ L L  NQL + P+ I  L NL  L +  N L S
Sbjct: 387 KEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 430



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 146/397 (36%), Positives = 217/397 (54%), Gaps = 6/397 (1%)

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           T L  +L N  ++R LDLR+ KL  LP  + +L +L+ L L FN +  +  +I  L NL 
Sbjct: 38  TDLAKTLQNPLKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQ 97

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L +  N +  LP E+G+L+NL  LDL  N L  LP EIG    L  LDL  N+L  +P 
Sbjct: 98  ELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPK 157

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +  L NL  L L  N+L ++P+ + +  +L   N+    L++LP  +   L ++  + L
Sbjct: 158 EIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEI-GELQNLKTLNL 216

Query: 340 SRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
             N+ T  P   G  Q   +  +    N+I  +P  I  + +NL  +++  N LT LP +
Sbjct: 217 LDNQLTTLPKEIGELQNLEILVL--RENRITALPKEI-GQLQNLQWLDLHQNQLTILPKE 273

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L  L+L  NQ++ L ++I  L NL+ L L  N L  LP  I  L+ L+ LDL+ 
Sbjct: 274 IGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDN 333

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L +LP E+  L+ LQ L L SN+L +LP+ IG L NL  L++  N L ++P+EIG L+
Sbjct: 334 NQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTTLPKEIGQLQ 393

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           NL  L L++N  L   P E+    NLQ + L   PLS
Sbjct: 394 NLQELCLDENQ-LTTFPKEIRQLKNLQELHLYLNPLS 429



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 131/341 (38%), Positives = 186/341 (54%), Gaps = 27/341 (7%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +R  K+  LP E+G+L+NL  LDL+ N L  LPKEIG    L  LDL  N L  +P  
Sbjct: 53  LDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL RL L  NRL ++P  + +  +L E ++    L++LP  +   L ++  + L 
Sbjct: 113 VGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEI-RQLRNLQELDLH 171

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN+ T  P                             + +NL  +N+    LT+LP ++G
Sbjct: 172 RNQLTTLPKE-------------------------IGQLQNLKTLNLIVTQLTTLPKEIG 206

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  LNL  NQ++ L ++I  L NLE+LVL  N +  LP  IG L+ L+ LDL +N+
Sbjct: 207 ELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQ 266

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L  LP EIG L+ LQRL L  NQL +LP+ IG L NL  L + EN L ++P+EI  L+NL
Sbjct: 267 LTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNL 326

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             L L DN  L  +P E+    +LQ+++L +  LS +P EI
Sbjct: 327 RVLDL-DNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEI 366



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/386 (35%), Positives = 208/386 (53%), Gaps = 26/386 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDLS +S+T LP  + +L +L+EL L  N L +LP ++G + NL  L L +N L 
Sbjct: 71  QNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLA 130

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L+ LDL  NKL  LP  + +L +L+ L L  N++ T+  +I  L NL  
Sbjct: 131 TLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKT 190

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++   ++  LP E+GEL+NL TL+L  N L  LPKEIG    L  L L+ N +  +P  
Sbjct: 191 LNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKE 250

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L  +P+ + +  +L   ++    L++LP   +  L ++  + L 
Sbjct: 251 IGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKE-IGQLQNLQELCLD 309

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL  +++ +N LT+LP ++ 
Sbjct: 310 ENQLTTLPKE-------------------------IEQLQNLRVLDLDNNQLTTLPKEVL 344

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L LG+N++S L ++I  L NL+VL L +N L  LP  IG L+ L+ L L+EN+
Sbjct: 345 RLQSLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQ 404

Query: 461 LESLPNEIGFLKELQRLILQSNQLVS 486
           L + P EI  LK LQ L L  N L S
Sbjct: 405 LTTFPKEIRQLKNLQELHLYLNPLSS 430



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/310 (35%), Positives = 180/310 (58%), Gaps = 4/310 (1%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   + TLDL++ +L  +P  +G L NL RL LS+N L  +P+ + +  +L E
Sbjct: 39  DLAKTLQNPLKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQE 98

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            ++   +L++LP  +   L ++  + L +N+    P     Q  ++  ++   N++  +P
Sbjct: 99  LDLSFNSLTTLPKEV-GQLENLQRLDLHQNRLATLPME-IGQLKNLQELDLNSNKLTTLP 156

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + +NL ++++  N LT+LP ++G    L  LNL   Q++ L ++I  L NL+ L 
Sbjct: 157 KEI-RQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLN 215

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L +N L  LP  IG L+ L+ L L EN++ +LP EIG L+ LQ L L  NQL  LP+ IG
Sbjct: 216 LLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIG 275

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L + +N L ++P+EIG L+NL  L L++N  L  +P E+    NL+++ LDN 
Sbjct: 276 QLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQ-LTTLPKEIEQLQNLRVLDLDNN 334

Query: 553 PLSQIPSEIV 562
            L+ +P E++
Sbjct: 335 QLTTLPKEVL 344


>gi|124003637|ref|ZP_01688486.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991206|gb|EAY30658.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 633

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 150/452 (33%), Positives = 243/452 (53%), Gaps = 4/452 (0%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           I  L L  + +T +P  + +LTHL+EL L  N+L   P  I ++T L  L L+ N    +
Sbjct: 167 IQTLCLQSNRLTEIPTEINQLTHLQELNLNNNQLTEFPLAITHLTTLKSLNLSGNKFHCV 226

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P ++  L +L    L+ +++  LP  +  L++L+ L L   RI+ +   +Q L  +  L+
Sbjct: 227 PVNIGKLSKLVTFTLKSDRIKALPETMGTLSNLQNLTLSSCRIQQLPESMQQLKQIGKLA 286

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           + +N+I + P  + +L +LV L L  N L+ LP+ IGN   L  L L +N L  +PD +G
Sbjct: 287 LDNNRIEKFPAVITKLSSLVYLKLQKNQLKHLPESIGNLRKLSHLSLSNNHLKKLPDSIG 346

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
           NL  L  L ++ N+L+++P T+ K   L E N+E   LS LP  +   LT +  + L+ N
Sbjct: 347 NLAQLMVLSVARNQLDALPATIGKLSELRELNLEQNQLSCLPQQVTQILT-LTQLKLTYN 405

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
           K T  P    +    +  +N  +NQ+  +P  +  + KNL ++++  N LT LP  +G  
Sbjct: 406 KLTHLPPKL-SNLQQLSLLNLSYNQLQVLPKSL-GKLKNLHQLSVDGNKLTHLPPGIGNL 463

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
             L+ LNL  NQ+  L + +  L NL  L +  N L +LP  I +L+KL  L L  N L 
Sbjct: 464 HRLSLLNLSYNQLQVLPKSLGKLKNLHQLSVDGNKLTELPKIIYDLKKLFLLSLNYNALT 523

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
           +LP  IG L ++  L L+ NQL  LP +IG L+ + +L++  N L  +P+ IG + +L+ 
Sbjct: 524 ALPESIGQLSKVVHLNLEGNQLTQLPESIGQLSKVVHLNLEGNQLTQLPKSIGNMRSLYA 583

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
           L L +N  L  +P  +     L+ + LD  P+
Sbjct: 584 LNLKNNQ-LTKLPQTIQKLRGLRFLLLDKNPI 614



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/336 (35%), Positives = 188/336 (55%), Gaps = 3/336 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + I  L L  + I   P  + KL+ L  L L  N+L  LP  IG +  L+ L L+ N L 
Sbjct: 280 KQIGKLALDNNRIEKFPAVITKLSSLVYLKLQKNQLKHLPESIGNLRKLSHLSLSNNHLK 339

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LPDS+ NL QL VL +  N+L+ LP  + KL+ L+ L L  N++  +   +  +  L+ 
Sbjct: 340 KLPDSIGNLAQLMVLSVARNQLDALPATIGKLSELRELNLEQNQLSCLPQQVTQILTLTQ 399

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  NK+  LPP+L  L+ L  L+L++N L+ LPK +G    L  L +  N+L ++P  
Sbjct: 400 LKLTYNKLTHLPPKLSNLQQLSLLNLSYNQLQVLPKSLGKLKNLHQLSVDGNKLTHLPPG 459

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +GNL  L+ L LSYN+L+ +P++L K  +L++ +V+G  L+ LP  ++  L  +  ++L+
Sbjct: 460 IGNLHRLSLLNLSYNQLQVLPKSLGKLKNLHQLSVDGNKLTELPK-IIYDLKKLFLLSLN 518

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N  TA P     Q + V  +N E NQ+ ++P  I   +K +  +N++ N LT LP  +G
Sbjct: 519 YNALTALPE-SIGQLSKVVHLNLEGNQLTQLPESIGQLSK-VVHLNLEGNQLTQLPKSIG 576

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
               L  LNL  NQ++KL + IQ L  L  L+L  N
Sbjct: 577 NMRSLYALNLKNNQLTKLPQTIQKLRGLRFLLLDKN 612



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 1/124 (0%)

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L+KLP  +  + K++ L L+ N+L  +P EI  L  LQ L L +NQL   P AI HLT L
Sbjct: 154 LEKLPPLVFQIPKIQTLCLQSNRLTEIPTEINQLTHLQELNLNNNQLTEFPLAITHLTTL 213

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
             L++  N    +P  IG L  L T  L  +  +  +P  +   SNLQ ++L +C + Q+
Sbjct: 214 KSLNLSGNKFHCVPVNIGKLSKLVTFTLKSDR-IKALPETMGTLSNLQNLTLSSCRIQQL 272

Query: 558 PSEI 561
           P  +
Sbjct: 273 PESM 276


>gi|418735840|ref|ZP_13292245.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410748568|gb|EKR01467.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 422

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 148/371 (39%), Positives = 219/371 (59%), Gaps = 14/371 (3%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +L ++L N   +R+L L +N+   LP  + +L +L  LYL  N++KT+  +I  L  +  
Sbjct: 33  NLTEALQNPTDVRILSLHNNE--TLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIER 90

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+ +N++  LP ++G+LK L  LDL +N L  LPKEIG    L  LDL +N+L  +P  
Sbjct: 91  LSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELDLTNNQLKTLPKD 150

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNIT 338
           +G L NL  L L  N+L+++P+ + +  +L E  ++G  L +LP   G L +LT +N   
Sbjct: 151 IGQLQNLRELYLDNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELN--- 207

Query: 339 LSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           L+ N  T  P   G       +  IN   N++  +P  I  + KNL +V+    LLT+LP
Sbjct: 208 LTNNPLTTLPKDIGNLKNLGELLLIN---NELTTLPKEI-GKLKNL-QVSYLGALLTTLP 262

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            D+G    L ELNL  NQI+ L +DI  L NL+VL LS N L  LP  IG L+ L+ LDL
Sbjct: 263 NDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDL 322

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N++ +LP +IG L+ L+ L L  N L +LP+ IG L +L  L++G N + +IP+EIG 
Sbjct: 323 SGNQITTLPKDIGELQSLRELNLSGNLLTTLPKDIGKLQSLRELNLGGNQITTIPKEIGH 382

Query: 517 LENLHTLYLND 527
           L+NL  LYL+D
Sbjct: 383 LKNLQVLYLDD 393



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/364 (36%), Positives = 203/364 (55%), Gaps = 27/364 (7%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LP  + +L +L ELYL  N+L +LP +IG +  +  L L+ N LT+LP  +  L++LR L
Sbjct: 55  LPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLREL 114

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           DL +N L  LP  + +L +L+ L L  N++KT+  DI  L NL  L + +N+++ LP ++
Sbjct: 115 DLTNNLLTTLPKEIGQLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDI 174

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
           G+L+NL  L L  N L+ LPK+IG    L  L+L +N L  +P  +GNL NL  L L  N
Sbjct: 175 GQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINN 234

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
            L ++P+ + K  +L + +  G  L++LP+ +                   Y        
Sbjct: 235 ELTTLPKEIGKLKNL-QVSYLGALLTTLPNDI------------------GY-------L 268

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
            S+  +N   NQI  +P  I  + +NL  + + +N L +LP ++G    L EL+L  NQI
Sbjct: 269 KSLRELNLSGNQITTLPKDI-GQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQI 327

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           + L +DI  L +L  L LS NLL  LP  IG L+ L+ L+L  N++ ++P EIG LK LQ
Sbjct: 328 TTLPKDIGELQSLRELNLSGNLLTTLPKDIGKLQSLRELNLGGNQITTIPKEIGHLKNLQ 387

Query: 476 RLIL 479
            L L
Sbjct: 388 VLYL 391



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 125/337 (37%), Positives = 192/337 (56%), Gaps = 8/337 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L LS + +  LP  + KL  +E L L  N+L +LP  IG +  L  L L  N LT
Sbjct: 63  QNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLT 122

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ LR LDL +N+L  LP  + +L +L+ LYL  N++KT+  DI  L NL  
Sbjct: 123 TLPKEIGQLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQLQNLRE 182

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LP ++G+L+NL  L+L +N L  LPK+IGN   L  L L +NEL  +P  
Sbjct: 183 LYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKE 242

Query: 281 LGNLINLTRLRLSY--NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           +G L N   L++SY    L ++P  +     L E N+ G  +++LP   +  L ++  + 
Sbjct: 243 IGKLKN---LQVSYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKD-IGQLQNLQVLY 298

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           LS N+    P     Q  ++  ++   NQI  +P  I    ++L ++N+  NLLT+LP D
Sbjct: 299 LSENQLATLPK-EIGQLQNLRELDLSGNQITTLPKDI-GELQSLRELNLSGNLLTTLPKD 356

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
           +G    L ELNLG NQI+ + ++I +L NL+VL L +
Sbjct: 357 IGKLQSLRELNLGGNQITTIPKEIGHLKNLQVLYLDD 393



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 110/313 (35%), Positives = 162/313 (51%), Gaps = 25/313 (7%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K + I  L LS + +T LP  + KL  L EL L  N L +LP +IG + NL  L L  N 
Sbjct: 84  KLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELDLTNNQ 143

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L +LP  +  LQ LR L L +N+L  LP  + +L +L+ LYL  N++KT+  DI  L NL
Sbjct: 144 LKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNL 203

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC---------TMLVT--- 266
           + L++ +N +  LP ++G LKNL  L L +N L  LPKEIG            +L T   
Sbjct: 204 TELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVSYLGALLTTLPN 263

Query: 267 ----------LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE 316
                     L+L  N++  +P  +G L NL  L LS N+L ++P+ + +  +L E ++ 
Sbjct: 264 DIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLS 323

Query: 317 GCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIF 376
           G  +++LP   +  L S+  + LS N  T  P     +  S+  +N   NQI  IP  I 
Sbjct: 324 GNQITTLPKD-IGELQSLRELNLSGNLLTTLPK-DIGKLQSLRELNLGGNQITTIPKEI- 380

Query: 377 SRAKNLSKVNMKD 389
              KNL  + + D
Sbjct: 381 GHLKNLQVLYLDD 393



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 160/310 (51%), Gaps = 34/310 (10%)

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           L + + N T +  L L +NE   +P  +G L NLT L LS N+L+++P+ + K       
Sbjct: 34  LTEALQNPTDVRILSLHNNE--TLPKEIGELQNLTELYLSSNQLKTLPKEIGK------- 84

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
                            L  I  ++LS N+ T  P     +   +  ++  +N +  +P 
Sbjct: 85  -----------------LQKIERLSLSNNQLTTLPKD-IGKLKKLRELDLTNNLLTTLPK 126

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
            I  + +NL ++++ +N L +LP D+G    L EL L  NQ+  L +DI  L NL  L L
Sbjct: 127 EI-GQLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQLQNLRELYL 185

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
             N LK LP  IG L+ L  L+L  N L +LP +IG LK L  L+L +N+L +LP+ IG 
Sbjct: 186 DGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGK 245

Query: 494 LTNL--SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
           L NL  SYL      L ++P +IG L++L  L L+ N  +  +P ++    NLQ++ L  
Sbjct: 246 LKNLQVSYLGAL---LTTLPNDIGYLKSLRELNLSGNQ-ITTLPKDIGQLQNLQVLYLSE 301

Query: 552 CPLSQIPSEI 561
             L+ +P EI
Sbjct: 302 NQLATLPKEI 311


>gi|421091300|ref|ZP_15552074.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|409999904|gb|EKO50586.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 400

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 141/381 (37%), Positives = 211/381 (55%), Gaps = 49/381 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + +L +L+ LYL+ N+L +LP++IG + NL  L L  N LT+LP+ 
Sbjct: 51  LDLSEQKLKTLPNEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLTTLPNE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L+ LDL HN+L  LP                        +I  L NL +L + +
Sbjct: 111 IGQLINLQTLDLIHNQLVILP-----------------------KEINQLQNLRVLGLSN 147

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+++ LP E+G+L+NL TLDL  N L+ LP EIG    L TLDL  N L  +P  +G L 
Sbjct: 148 NQLKILPKEIGQLENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLK 207

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L LS N+L+++P+ + +  +L   ++    L++LP+ +   L ++  + L +N  T
Sbjct: 208 NLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEI-GQLKNLYELYLGKNLLT 266

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                             + KNL  +++ +N LT+LP ++G    L
Sbjct: 267 TLPKE-------------------------VGQLKNLPTLDLSNNRLTTLPKEIGQLKNL 301

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            EL LGTNQ + L ++I+ L NL+VL L+NN LK LP+ I  L+ L+ LDL +N+L++LP
Sbjct: 302 RELYLGTNQFTALPKEIRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLP 361

Query: 466 NEIGFLKELQRLILQSNQLVS 486
            EI  L+ LQRL LQ NQL S
Sbjct: 362 KEIEKLQNLQRLYLQYNQLSS 382



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 137/371 (36%), Positives = 200/371 (53%), Gaps = 26/371 (7%)

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           + T L  +L N   +RVLDL   KL  LP  + +L +L+ LYL  N++ T          
Sbjct: 34  AYTDLTKALKNPLDVRVLDLSEQKLKTLPNEIGQLQNLQTLYLWNNQLTT---------- 83

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
                        LP E+G+LKNL TL+L  N L  LP EIG    L TLDL HN+LV +
Sbjct: 84  -------------LPNEIGQLKNLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVIL 130

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  +  L NL  L LS N+L+ +P+ + +  +L   ++    L +LP+ +   L ++  +
Sbjct: 131 PKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYANQLKALPNEI-GQLKNLQTL 189

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            LS+N  T  P     Q  ++  +    NQ+  +P  I  + +NL  +++ DN LT+LP 
Sbjct: 190 DLSKNILTILPKE-IGQLKNLRELYLSSNQLKTLPKEI-GQLENLQTLHLSDNQLTTLPN 247

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++G    L EL LG N ++ L +++  L NL  L LSNN L  LP  IG L+ L+ L L 
Sbjct: 248 EIGQLKNLYELYLGKNLLTTLPKEVGQLKNLPTLDLSNNRLTTLPKEIGQLKNLRELYLG 307

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
            N+  +LP EI  L+ LQ L L +NQL +LP  I  L NL  L + +N L+++P+EI  L
Sbjct: 308 TNQFTALPKEIRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPKEIEKL 367

Query: 518 ENLHTLYLNDN 528
           +NL  LYL  N
Sbjct: 368 QNLQRLYLQYN 378



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 122/345 (35%), Positives = 191/345 (55%), Gaps = 27/345 (7%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L + + K++ LP E+G+L+NL TL L +N L  LP EIG    L TL+L  N+L  
Sbjct: 47  DVRVLDLSEQKLKTLPNEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLTT 106

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P+ +G LINL  L L +N+L  +P+ +++  +L    +    L  LP  +         
Sbjct: 107 LPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEI--------- 157

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
                            Q  ++ +++   NQ+  +P  I  + KNL  +++  N+LT LP
Sbjct: 158 ----------------GQLENLQTLDLYANQLKALPNEI-GQLKNLQTLDLSKNILTILP 200

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L EL L +NQ+  L ++I  L NL+ L LS+N L  LP+ IG L+ L  L L
Sbjct: 201 KEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYL 260

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
            +N L +LP E+G LK L  L L +N+L +LP+ IG L NL  L +G N   ++P+EI  
Sbjct: 261 GKNLLTTLPKEVGQLKNLPTLDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKEIRQ 320

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+NL  L+LN+N  L  +P E+    NLQ++ L++  L  +P EI
Sbjct: 321 LQNLQVLFLNNNQ-LKTLPNEIEKLQNLQVLDLNDNQLKTLPKEI 364



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 132/379 (34%), Positives = 203/379 (53%), Gaps = 49/379 (12%)

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           KL +LP++IG + NL  L L  N LT+LP+ +  L+ L+ L+L  N+L  LP  + +L +
Sbjct: 57  KLKTLPNEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLTTLPNEIGQLIN 116

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L+ L L  N++  +  +I  L NL +L + +N+++ LP E+G+L+NL TLDL  N L+ L
Sbjct: 117 LQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYANQLKAL 176

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P EIG    L TLDL  N L  +P  +G L NL  L LS N+L+++P+ + +        
Sbjct: 177 PNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQ-------- 228

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
                           L ++  + LS N+ T  P+    Q  ++Y +    N +  +P  
Sbjct: 229 ----------------LENLQTLHLSDNQLTTLPNE-IGQLKNLYELYLGKNLLTTLPKE 271

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           +  + KNL  +++ +N LT+LP ++G    L EL LGTNQ + L ++I+ L NL+VL L+
Sbjct: 272 V-GQLKNLPTLDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKEIRQLQNLQVLFLN 330

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
           NN                       +L++LPNEI  L+ LQ L L  NQL +LP+ I  L
Sbjct: 331 NN-----------------------QLKTLPNEIEKLQNLQVLDLNDNQLKTLPKEIEKL 367

Query: 495 TNLSYLSVGENNLQSIPEE 513
            NL  L +  N L S  +E
Sbjct: 368 QNLQRLYLQYNQLSSEEKE 386



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 136/248 (54%), Gaps = 1/248 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDL  + +  LP  + +L +L  L L  N+L  LP +IG + NL  L L  N L +
Sbjct: 116 NLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYANQLKA 175

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP+ +  L+ L+ LDL  N L  LP  + +L +L+ LYL  N++KT+  +I  L NL  L
Sbjct: 176 LPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTL 235

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + DN++  LP E+G+LKNL  L L  N L  LPKE+G    L TLDL +N L  +P  +
Sbjct: 236 HLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLPTLDLSNNRLTTLPKEI 295

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L L  N+  ++P+ + +  +L    +    L +LP+  +  L ++  + L+ 
Sbjct: 296 GQLKNLRELYLGTNQFTALPKEIRQLQNLQVLFLNNNQLKTLPNE-IEKLQNLQVLDLND 354

Query: 342 NKFTAYPS 349
           N+    P 
Sbjct: 355 NQLKTLPK 362



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 161/316 (50%), Gaps = 26/316 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + +T LP  + +L +L+ L L  N+L  LP +I  + NL  LGL+ N L 
Sbjct: 92  KNLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLK 151

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  L+ L+ LDL  N+L  LP  + +L +L+ L L  N +  +  +I  L NL  
Sbjct: 152 ILPKEIGQLENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRE 211

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LP E+G+L+NL TL L+ N L  LP EIG    L  L L  N L  +P  
Sbjct: 212 LYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKE 271

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LS NRL ++P+ + +  +L E                        + L 
Sbjct: 272 VGQLKNLPTLDLSNNRLTTLPKEIGQLKNLRE------------------------LYLG 307

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+FTA P     Q  ++  +   +NQ+  +P  I  + +NL  +++ DN L +LP ++ 
Sbjct: 308 TNQFTALPK-EIRQLQNLQVLFLNNNQLKTLPNEI-EKLQNLQVLDLNDNQLKTLPKEIE 365

Query: 401 TWVGLTELNLGTNQIS 416
               L  L L  NQ+S
Sbjct: 366 KLQNLQRLYLQYNQLS 381



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/246 (35%), Positives = 141/246 (57%), Gaps = 1/246 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L LS + +  LP  + +L +L+ L LY N+L +LP++IG + NL  L L++N LT
Sbjct: 138 QNLRVLGLSNNQLKILPKEIGQLENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILT 197

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  L+ LR L L  N+L  LP  + +L +L+ L+L  N++ T+  +I  L NL  
Sbjct: 198 ILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYE 257

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N +  LP E+G+LKNL TLDL++N L  LPKEIG    L  L L  N+   +P  
Sbjct: 258 LYLGKNLLTTLPKEVGQLKNLPTLDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKE 317

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L+ N+L+++P  + K  +L   ++    L +LP   +  L ++  + L 
Sbjct: 318 IRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPKE-IEKLQNLQRLYLQ 376

Query: 341 RNKFTA 346
            N+ ++
Sbjct: 377 YNQLSS 382



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 97/157 (61%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN+  L LS + +T LP  + +L +L ELYL  N L +LP ++G + NL  L L+ N LT
Sbjct: 230 ENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLPTLDLSNNRLT 289

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ LR L L  N+   LP  + +L +L++L+L  N++KT+  +I+ L NL +
Sbjct: 290 TLPKEIGQLKNLRELYLGTNQFTALPKEIRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQV 349

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L + DN+++ LP E+ +L+NL  L L +N L    KE
Sbjct: 350 LDLNDNQLKTLPKEIEKLQNLQRLYLQYNQLSSEEKE 386


>gi|421094655|ref|ZP_15555371.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362717|gb|EKP13754.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|456891510|gb|EMG02221.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 422

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 146/371 (39%), Positives = 219/371 (59%), Gaps = 14/371 (3%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +L ++L N   +R+L L +N+   LP  + +L +L  LYL  N++KT+  +I  L  +  
Sbjct: 33  NLTEALQNPTDVRILSLHNNE--TLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIER 90

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+ +N++  LP ++G+LK L  LDL +N L  LPK+IG    L  L L +N+L  +P  
Sbjct: 91  LSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKDIGQLQNLRELYLTNNQLKTLPKD 150

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNIT 338
           +G L NL  L L  N+L+++P+ + +  +L E N++G  L +LP   G L +LT +N   
Sbjct: 151 IGQLQNLRELYLDNNQLKTLPKDIGQLQNLRELNLDGNQLKTLPKDIGKLQNLTELN--- 207

Query: 339 LSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           L+ N  T  P   G       +  IN   N++  +P  I  + KNL  + +   LLT+LP
Sbjct: 208 LTNNPLTTLPKDIGNLKNLGELLLIN---NELTTLPKEI-GKLKNLQVLYL-GALLTTLP 262

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            D+G    L ELNL  NQI+ L +DI  L NL+VL LS N L  LP  IG L+ L+ LDL
Sbjct: 263 NDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDL 322

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N++ +LP +IG L+ L+ L L  NQ+ +LP+ IG L +L  L++G N + +IP+EIG 
Sbjct: 323 SGNQITTLPKDIGELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIPKEIGH 382

Query: 517 LENLHTLYLND 527
           L+NL  LYL+D
Sbjct: 383 LKNLQVLYLDD 393



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 133/364 (36%), Positives = 203/364 (55%), Gaps = 27/364 (7%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LP  + +L +L ELYL  N+L +LP +IG +  +  L L+ N LT+LP  +  L++LR L
Sbjct: 55  LPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLREL 114

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           DL +N L  LP  + +L +L+ LYL  N++KT+  DI  L NL  L + +N+++ LP ++
Sbjct: 115 DLTNNLLTTLPKDIGQLQNLRELYLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDI 174

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
           G+L+NL  L+L  N L+ LPK+IG    L  L+L +N L  +P  +GNL NL  L L  N
Sbjct: 175 GQLQNLRELNLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINN 234

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
            L ++P+ + K  +L    + G  L++LP+ +                   Y        
Sbjct: 235 ELTTLPKEIGKLKNLQVLYL-GALLTTLPNDI------------------GY-------L 268

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
            S+  +N   NQI  +P  I  + +NL  + + +N L +LP ++G    L EL+L  NQI
Sbjct: 269 KSLRELNLSGNQITTLPKDI-GQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQI 327

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           + L +DI  L +L  L LS N +  LP  IG L+ L+ L+L  N++ ++P EIG LK LQ
Sbjct: 328 TTLPKDIGELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIPKEIGHLKNLQ 387

Query: 476 RLIL 479
            L L
Sbjct: 388 VLYL 391



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 128/379 (33%), Positives = 203/379 (53%), Gaps = 31/379 (8%)

Query: 200 LRFNRIKTVHPDIQYLSN---LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPK 256
           L+   I T H   + L N   + +LS+ +N+   LP E+GEL+NL  L L+ N L+ LPK
Sbjct: 23  LKAQEIGTYHNLTEALQNPTDVRILSLHNNET--LPKEIGELQNLTELYLSSNQLKTLPK 80

Query: 257 EIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE 316
           EIG    +  L L +N+L  +P  +G L  L  L L+ N L ++P+ + +  +L E  + 
Sbjct: 81  EIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKDIGQLQNLRELYLT 140

Query: 317 GCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIF 376
              L +LP  +   L ++  + L  N+    P     Q  ++  +N + NQ+  +P  I 
Sbjct: 141 NNQLKTLPKDI-GQLQNLRELYLDNNQLKTLPKD-IGQLQNLRELNLDGNQLKTLPKDI- 197

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL--- 433
            + +NL+++N+ +N LT+LP D+G    L EL L  N+++ L ++I  L NL+VL L   
Sbjct: 198 GKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGAL 257

Query: 434 -------------------SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
                              S N +  LP  IG L+ L+ L L EN+L +LP EIG L+ L
Sbjct: 258 LTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNL 317

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           + L L  NQ+ +LP+ IG L +L  L++  N + ++P+EIG L++L  L L  N  +  I
Sbjct: 318 RELDLSGNQITTLPKDIGELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQ-ITTI 376

Query: 535 PFELALCSNLQIMSLDNCP 553
           P E+    NLQ++ LD+ P
Sbjct: 377 PKEIGHLKNLQVLYLDDIP 395



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 121/335 (36%), Positives = 189/335 (56%), Gaps = 4/335 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L LS + +  LP  + KL  +E L L  N+L +LP  IG +  L  L L  N LT
Sbjct: 63  QNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLT 122

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ LR L L +N+L  LP  + +L +L+ LYL  N++KT+  DI  L NL  
Sbjct: 123 TLPKDIGQLQNLRELYLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQLQNLRE 182

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  N+++ LP ++G+L+NL  L+L +N L  LPK+IGN   L  L L +NEL  +P  
Sbjct: 183 LNLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKE 242

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L    L ++P  +     L E N+ G  +++LP   +  L ++  + LS
Sbjct: 243 IGKLKNLQVLYLGA-LLTTLPNDIGYLKSLRELNLSGNQITTLPKD-IGQLQNLQVLYLS 300

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P     Q  ++  ++   NQI  +P  I    ++L ++N+  N +T+LP ++G
Sbjct: 301 ENQLATLPK-EIGQLQNLRELDLSGNQITTLPKDI-GELQSLRELNLSGNQITTLPKEIG 358

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
               L ELNLG NQI+ + ++I +L NL+VL L +
Sbjct: 359 KLQSLRELNLGGNQITTIPKEIGHLKNLQVLYLDD 393



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 157/329 (47%), Gaps = 72/329 (21%)

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           L + + N T +  L L +NE   +P  +G L NLT L LS N+L+++P+ + K       
Sbjct: 34  LTEALQNPTDVRILSLHNNE--TLPKEIGELQNLTELYLSSNQLKTLPKEIGK------- 84

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
                            L  I  ++LS N+ T  P                         
Sbjct: 85  -----------------LQKIERLSLSNNQLTTLPKD----------------------- 104

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
               + K L ++++ +NLLT+LP D+G    L EL L  NQ+  L +DI  L NL  L L
Sbjct: 105 --IGKLKKLRELDLTNNLLTTLPKDIGQLQNLRELYLTNNQLKTLPKDIGQLQNLRELYL 162

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
            NN LK LP  IG L+ L+ L+L+ N+L++LP +IG L+ L  L L +N L +LP+ IG+
Sbjct: 163 DNNQLKTLPKDIGQLQNLRELNLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGN 222

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYL--------ND-------------NTCLN 532
           L NL  L +  N L ++P+EIG L+NL  LYL        ND                + 
Sbjct: 223 LKNLGELLLINNELTTLPKEIGKLKNLQVLYLGALLTTLPNDIGYLKSLRELNLSGNQIT 282

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            +P ++    NLQ++ L    L+ +P EI
Sbjct: 283 TLPKDIGQLQNLQVLYLSENQLATLPKEI 311


>gi|456823284|gb|EMF71754.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 455

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 151/420 (35%), Positives = 218/420 (51%), Gaps = 49/420 (11%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL    +T LP  + +L +L+ L L   KL +LP +IG + NL  L L+ NSLT+LP  
Sbjct: 53  LDLRYQKLTILPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ LDL  N+L  LPM                       +I  L NL  L +  
Sbjct: 113 VGQLENLQRLDLHQNRLATLPM-----------------------EIGQLKNLQELDLNS 149

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+  LP E+ +L+NL  LDL  N L  LPKEIG    L TL+    +L  +P  +G L 
Sbjct: 150 NKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNSIVTQLTTLPKEIGELQ 209

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L ++P+ + +                        L ++  + L  N+ T
Sbjct: 210 NLKTLNLLDNQLTTLPKEIGE------------------------LQNLEILVLRENRIT 245

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           A P     Q  ++  ++   NQ+  +P  I  + +NL ++++  N LT+LP ++G    L
Sbjct: 246 ALPK-EIGQLQNLQWLDLHQNQLTTLPKEI-GQLQNLQRLDLHQNQLTTLPKEIGQLQNL 303

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            EL L  NQ++ L ++I+ L NL VL L NN L  LP  +  L+ L+ L L  N+L +LP
Sbjct: 304 QELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLP 363

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            EIG L+ LQ L L SNQL +LP+ IG L NL  L + EN L + P+EI  L+NL  L+L
Sbjct: 364 KEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHL 423



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 145/397 (36%), Positives = 216/397 (54%), Gaps = 6/397 (1%)

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           T L  +L N  ++R LDLR+ KL  LP  + +L +L+ L L   ++ T+  +I  L NL 
Sbjct: 38  TDLAKALQNPLKVRTLDLRYQKLTILPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRNLQ 97

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L +  N +  LP E+G+L+NL  LDL  N L  LP EIG    L  LDL  N+L  +P 
Sbjct: 98  ELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPK 157

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +  L NL  L L  N+L ++P+ + +  +L   N     L++LP  +   L ++  + L
Sbjct: 158 EIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNSIVTQLTTLPKEI-GELQNLKTLNL 216

Query: 340 SRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
             N+ T  P   G  Q   +  +    N+I  +P  I  + +NL  +++  N LT+LP +
Sbjct: 217 LDNQLTTLPKEIGELQNLEILVL--RENRITALPKEI-GQLQNLQWLDLHQNQLTTLPKE 273

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L  L+L  NQ++ L ++I  L NL+ L L  N L  LP  I  L+ L+ LDL+ 
Sbjct: 274 IGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDN 333

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L +LP E+  L+ LQ L L SN+L +LP+ IG L NL  L +  N L ++P+EIG L+
Sbjct: 334 NQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQ 393

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           NL  L L++N  L   P E+    NLQ + L   PLS
Sbjct: 394 NLQELCLDENQ-LTTFPKEIRQLKNLQELHLYLNPLS 429



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/341 (37%), Positives = 184/341 (53%), Gaps = 27/341 (7%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +R  K+  LP E+G+L+NL  L+L    L  LPKEIG    L  LDL  N L  +P  
Sbjct: 53  LDLRYQKLTILPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL RL L  NRL ++P  + +  +L E ++    L++LP  +   L ++  + L 
Sbjct: 113 VGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEI-RQLRNLQELDLH 171

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN+ T  P                             + +NL  +N     LT+LP ++G
Sbjct: 172 RNQLTTLPKE-------------------------IGQLQNLKTLNSIVTQLTTLPKEIG 206

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  LNL  NQ++ L ++I  L NLE+LVL  N +  LP  IG L+ L+ LDL +N+
Sbjct: 207 ELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQ 266

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L +LP EIG L+ LQRL L  NQL +LP+ IG L NL  L + EN L ++P+EI  L+NL
Sbjct: 267 LTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNL 326

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             L L DN  L  +P E+    +LQ+++L +  LS +P EI
Sbjct: 327 RVLDL-DNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEI 366



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/362 (34%), Positives = 194/362 (53%), Gaps = 26/362 (7%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS +S+T LP  V +L +L+ L L+ N+LA+LP +IG + NL  L L  N LT+
Sbjct: 95  NLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTT 154

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L+ L+ LDL  N+L  LP  + +L +LK L     ++ T+  +I  L NL  L
Sbjct: 155 LPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNSIVTQLTTLPKEIGELQNLKTL 214

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++ DN++  LP E+GEL+NL  L L  N +  LPKEIG    L  LDL  N+L  +P  +
Sbjct: 215 NLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEI 274

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL RL L  N+L ++P+ + +  +L E  ++   L++LP  +              
Sbjct: 275 GQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEI-------------- 320

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                       Q  ++  ++ ++NQ+  +P  +  R ++L  + +  N L++LP ++G 
Sbjct: 321 -----------EQLQNLRVLDLDNNQLTTLPKEVL-RLQSLQVLALGSNRLSTLPKEIGQ 368

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L L +NQ++ L ++I  L NL+ L L  N L   P  I  L+ L+ L L  N L
Sbjct: 369 LQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 428

Query: 462 ES 463
            S
Sbjct: 429 SS 430



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 128/222 (57%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + +T LP  + +L +LE L L  N++ +LP +IG + NL  L L +N LT
Sbjct: 209 QNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLT 268

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ L+ LDL  N+L  LP  + +L +L+ L L  N++ T+  +I+ L NL +
Sbjct: 269 TLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRV 328

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++  LP E+  L++L  L L  N L  LPKEIG    L  L L  N+L  +P  
Sbjct: 329 LDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKE 388

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           +G L NL  L L  N+L + P+ + +  +L E ++    LSS
Sbjct: 389 IGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 430


>gi|260793210|ref|XP_002591605.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
 gi|229276814|gb|EEN47616.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
          Length = 1573

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 153/482 (31%), Positives = 251/482 (52%), Gaps = 25/482 (5%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           NI  L L+K+++  +P  V +LTHL  L L  N L  L ++IG ++N+  L L++ +L +
Sbjct: 116 NIRVLKLNKTNMVTVPTVVWRLTHLHTLELGSNTLNVLNAEIGLLSNMEHLNLSKCNLHT 175

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L QLR LD+R N +  LP  V +LT++K L L + +++ + P+I  L+ L  L
Sbjct: 176 LPLEIWRLIQLRWLDVRFNPIQMLPAGVGQLTNIKHLNLSYCKLRILPPEIGNLTQLEWL 235

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N+++ LP E+  L N+  L L   ++  LP E+G  T L  L L  N L  +P  +
Sbjct: 236 DLCGNQLQTLPGEVRYLTNVKHLYLHSCNMHTLPPEVGRLTQLQWLGLSSNNLQTLPSEI 295

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L N+    LS  +L ++P  + +   L    +    L +LP   +  LT + ++ +S 
Sbjct: 296 GQLTNIKHFDLSLCKLRTLPPEVGRLTQLEWLELSQNPLQTLPAD-IRQLTCLKHLDMSY 354

Query: 342 NKFTAYPS--GGPTQF--------------------TSVYSINFEHNQIDKIPYGIFSRA 379
            + T  P   G  TQ                      ++ S N    Q+  +P  I  R 
Sbjct: 355 CQLTLLPREVGALTQLECLVMIRNPLQMLTTDVQHIINIESFNLSQCQLTTLPPEI-GRL 413

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
            +L  +++  N L  LP +LG    +  L+L   ++  L  ++  L  +E L LS N L+
Sbjct: 414 AHLRWLDLSYNPLQILPPNLGQLSSIRHLDLSHCKLHTLPRELGKLTQIEWLDLSFNPLQ 473

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
            L + +G L  +K LD+ E KL S+P E+G L +L+ L L SN L +LP  +G L N+++
Sbjct: 474 VLLAEVGQLTNVKHLDMSECKLHSIPPEVGKLTQLEWLHLSSNPLKTLPPEVGQLANVTH 533

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPS 559
           L + E  L+++P E+G LE L  L L+ N  L  +P ++   +N+Q + L +C L+ +P 
Sbjct: 534 LDMSECKLRTLPPEVGRLEQLKWLNLSSNP-LQALPAQIGQLNNIQNLDLSSCELTTLPP 592

Query: 560 EI 561
           EI
Sbjct: 593 EI 594



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 240/473 (50%), Gaps = 27/473 (5%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           NI +L+LS   +  LPP +  LT LE L L GN+L +LP ++ Y+TN+  L L   ++ +
Sbjct: 208 NIKHLNLSYCKLRILPPEIGNLTQLEWLDLCGNQLQTLPGEVRYLTNVKHLYLHSCNMHT 267

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L QL+ L L  N L  LP  + +LT++K            H D+         
Sbjct: 268 LPPEVGRLTQLQWLGLSSNNLQTLPSEIGQLTNIK------------HFDLSLC------ 309

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
                K+R LPPE+G L  L  L+L+ N L+ LP +I   T L  LD+ + +L  +P  +
Sbjct: 310 -----KLRTLPPEVGRLTQLEWLELSQNPLQTLPADIRQLTCLKHLDMSYCQLTLLPREV 364

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  L  L +  N L+ +   +   +++  FN+  C L++LP   +  L  +  + LS 
Sbjct: 365 GALTQLECLVMIRNPLQMLTTDVQHIINIESFNLSQCQLTTLPPE-IGRLAHLRWLDLSY 423

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N     P     Q +S+  ++  H ++  +P  +  +   +  +++  N L  L  ++G 
Sbjct: 424 NPLQILPPNL-GQLSSIRHLDLSHCKLHTLPREL-GKLTQIEWLDLSFNPLQVLLAEVGQ 481

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +  L++   ++  +  ++  L  LE L LS+N LK LP  +G L  +  LD+ E KL
Sbjct: 482 LTNVKHLDMSECKLHSIPPEVGKLTQLEWLHLSSNPLKTLPPEVGQLANVTHLDMSECKL 541

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            +LP E+G L++L+ L L SN L +LP  IG L N+  L +    L ++P EIG L  L 
Sbjct: 542 RTLPPEVGRLEQLKWLNLSSNPLQALPAQIGQLNNIQNLDLSSCELTTLPPEIGKLTQLE 601

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
            L ++DN  L  +P E+   +N+  + +    LS+ P+E+   G + I +Y +
Sbjct: 602 RLNVSDNP-LQTLPAEIVHLTNISHLKISTRTLSKPPAEVCRQGIATIRQYFE 653



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 244/486 (50%), Gaps = 27/486 (5%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L+L+  ++T +P  V KL  L+ L L  N+   LP ++  +TN+  L L + +
Sbjct: 67  KLQNLKVLNLNDCNLTTVPAVVMKLPQLQTLILSNNENIILPDEMSGLTNIRVLKLNKTN 126

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLN-----------------------ELPMVVYKLTSL 195
           + ++P  +  L  L  L+L  N LN                        LP+ +++L  L
Sbjct: 127 MVTVPTVVWRLTHLHTLELGSNTLNVLNAEIGLLSNMEHLNLSKCNLHTLPLEIWRLIQL 186

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           + L +RFN I+ +   +  L+N+  L++   K+R LPPE+G L  L  LDL  N L+ LP
Sbjct: 187 RWLDVRFNPIQMLPAGVGQLTNIKHLNLSYCKLRILPPEIGNLTQLEWLDLCGNQLQTLP 246

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
            E+   T +  L L    +  +P  +G L  L  L LS N L+++P  + +  ++  F++
Sbjct: 247 GEVRYLTNVKHLYLHSCNMHTLPPEVGRLTQLQWLGLSSNNLQTLPSEIGQLTNIKHFDL 306

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
             C L +LP   +  LT +  + LS+N     P+    Q T +  ++  + Q+  +P  +
Sbjct: 307 SLCKLRTLPPE-VGRLTQLEWLELSQNPLQTLPA-DIRQLTCLKHLDMSYCQLTLLPREV 364

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
            +  + L  + M  N L  L  D+   + +   NL   Q++ L  +I  L +L  L LS 
Sbjct: 365 GALTQ-LECLVMIRNPLQMLTTDVQHIINIESFNLSQCQLTTLPPEIGRLAHLRWLDLSY 423

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N L+ LP ++G L  ++ LDL   KL +LP E+G L +++ L L  N L  L   +G LT
Sbjct: 424 NPLQILPPNLGQLSSIRHLDLSHCKLHTLPRELGKLTQIEWLDLSFNPLQVLLAEVGQLT 483

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           N+ +L + E  L SIP E+G L  L  L+L+ N  L  +P E+   +N+  + +  C L 
Sbjct: 484 NVKHLDMSECKLHSIPPEVGKLTQLEWLHLSSNP-LKTLPPEVGQLANVTHLDMSECKLR 542

Query: 556 QIPSEI 561
            +P E+
Sbjct: 543 TLPPEV 548



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 148/517 (28%), Positives = 244/517 (47%), Gaps = 53/517 (10%)

Query: 93  KEFLRCKEE-NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTC 151
           KE+   +E   +L LD S   +  LP  +  +  LE L L G K   LP+++  + NL  
Sbjct: 14  KEWAISEERVTLLTLDFSGHYVEQLPEELYGIEELEALDLTGKKGIKLPNELTKLQNLKV 73

Query: 152 LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD 211
           L L + +LT++P  +  L QL+ L L +N+   LP  +  LT++++L L    + TV   
Sbjct: 74  LNLNDCNLTTVPAVVMKLPQLQTLILSNNENIILPDEMSGLTNIRVLKLNKTNMVTVPTV 133

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
           +  L++L  L +  N +  L  E+G L N+  L+L+  +L  LP EI     L  LD++ 
Sbjct: 134 VWRLTHLHTLELGSNTLNVLNAEIGLLSNMEHLNLSKCNLHTLPLEIWRLIQLRWLDVRF 193

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           N +  +P  +G L N+  L LSY +L  +P  +     L   ++ G  L +LP G +  L
Sbjct: 194 NPIQMLPAGVGQLTNIKHLNLSYCKLRILPPEIGNLTQLEWLDLCGNQLQTLP-GEVRYL 252

Query: 332 TSINNITL-SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI--------------- 375
           T++ ++ L S N  T  P  G  + T +  +    N +  +P  I               
Sbjct: 253 TNVKHLYLHSCNMHTLPPEVG--RLTQLQWLGLSSNNLQTLPSEIGQLTNIKHFDLSLCK 310

Query: 376 -------FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS------------ 416
                    R   L  + +  N L +LP D+     L  L++   Q++            
Sbjct: 311 LRTLPPEVGRLTQLEWLELSQNPLQTLPADIRQLTCLKHLDMSYCQLTLLPREVGALTQL 370

Query: 417 -----------KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
                       L+ D+Q+++N+E   LS   L  LP  IG L  L+ LDL  N L+ LP
Sbjct: 371 ECLVMIRNPLQMLTTDVQHIINIESFNLSQCQLTTLPPEIGRLAHLRWLDLSYNPLQILP 430

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
             +G L  ++ L L   +L +LPR +G LT + +L +  N LQ +  E+G L N+   +L
Sbjct: 431 PNLGQLSSIRHLDLSHCKLHTLPRELGKLTQIEWLDLSFNPLQVLLAEVGQLTNVK--HL 488

Query: 526 NDNTC-LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           + + C L++IP E+   + L+ + L + PL  +P E+
Sbjct: 489 DMSECKLHSIPPEVGKLTQLEWLHLSSNPLKTLPPEV 525



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 97/195 (49%), Gaps = 3/195 (1%)

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
           +D   + I      L  ++   + +  LP +L     L  L+L   +  KL  ++  L N
Sbjct: 11  LDSKEWAISEERVTLLTLDFSGHYVEQLPEELYGIEELEALDLTGKKGIKLPNELTKLQN 70

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           L+VL L++  L  +P+ +  L +L+ L L  N+   LP+E+  L  ++ L L    +V++
Sbjct: 71  LKVLNLNDCNLTTVPAVVMKLPQLQTLILSNNENIILPDEMSGLTNIRVLKLNKTNMVTV 130

Query: 488 PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC-LNNIPFELALCSNLQI 546
           P  +  LT+L  L +G N L  +  EIG L N+   +LN + C L+ +P E+     L+ 
Sbjct: 131 PTVVWRLTHLHTLELGSNTLNVLNAEIGLLSNME--HLNLSKCNLHTLPLEIWRLIQLRW 188

Query: 547 MSLDNCPLSQIPSEI 561
           + +   P+  +P+ +
Sbjct: 189 LDVRFNPIQMLPAGV 203


>gi|417782158|ref|ZP_12429891.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410777751|gb|EKR62396.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 447

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 152/406 (37%), Positives = 226/406 (55%), Gaps = 26/406 (6%)

Query: 100 EENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL 159
           E  IL+L  + + +T LP  + KL +L+EL L  NKL +LP +IG + NL  L L EN L
Sbjct: 50  EVRILDLRNNDNELTVLPKEIGKLQNLQELNLNYNKLTTLPEEIGQLQNLQILHLCENQL 109

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           T+LP  +  LQ+L++L L HNKL  LP  + +L +L+ L L   ++ T+  +I  L  L 
Sbjct: 110 TTLPKEIGQLQRLQILHLAHNKLTTLPEEIGQLQNLQELNLNGWQLSTLPKEIGKLQKLQ 169

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
           +LS+  N+   LP E+G+L+NL  L L  N L  LPKEI +   L  L+L HN+L+ +P 
Sbjct: 170 VLSLDLNERTTLPKEIGQLQNLQILYLRANQLTNLPKEIIHLQKLQELNLNHNQLITLPK 229

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +G L NL  L L  N+L  +P+ + +  +L + N                        L
Sbjct: 230 EIGKLRNLKILNLEDNQLMIIPKEIEQLENLQKLN------------------------L 265

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
            RN+ T   + G     ++  ++ E NQ+  +P  I  + +NL  +N+ +N LT+L   +
Sbjct: 266 GRNQLTTL-TKGIGDLQNLKELHLEINQLTTLPKEI-GKLQNLKILNLCNNELTTLSNGI 323

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G    L +L+L  NQ++ L ++I  L NL+VL L NN L  LP  IG L+ LK LDL+ N
Sbjct: 324 GRLQNLQKLDLRFNQLTTLPKEIGKLQNLKVLDLYNNQLTTLPKKIGKLQNLKVLDLDYN 383

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
           +L +LP EIG L+ L++L L  NQL  LP+ I  L  L+ LS+  N
Sbjct: 384 QLTTLPKEIGQLQNLRQLNLNHNQLTILPKDIEQLKKLNTLSLRNN 429



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 144/397 (36%), Positives = 227/397 (57%), Gaps = 6/397 (1%)

Query: 161 SLPDSLANLQQLRVLDLRHN--KLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           +L ++L N  ++R+LDLR+N  +L  LP  + KL +L+ L L +N++ T+  +I  L NL
Sbjct: 40  NLTEALQNPNEVRILDLRNNDNELTVLPKEIGKLQNLQELNLNYNKLTTLPEEIGQLQNL 99

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            +L + +N++  LP E+G+L+ L  L LAHN L  LP+EIG    L  L+L   +L  +P
Sbjct: 100 QILHLCENQLTTLPKEIGQLQRLQILHLAHNKLTTLPEEIGQLQNLQELNLNGWQLSTLP 159

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L  L  L L  N   ++P+ + +  +L    +    L++LP  ++  L  +  + 
Sbjct: 160 KEIGKLQKLQVLSLDLNERTTLPKEIGQLQNLQILYLRANQLTNLPKEIIH-LQKLQELN 218

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           L+ N+    P     +  ++  +N E NQ+  IP  I  + +NL K+N+  N LT+L   
Sbjct: 219 LNHNQLITLPKE-IGKLRNLKILNLEDNQLMIIPKEI-EQLENLQKLNLGRNQLTTLTKG 276

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L EL+L  NQ++ L ++I  L NL++L L NN L  L + IG L+ L+ LDL  
Sbjct: 277 IGDLQNLKELHLEINQLTTLPKEIGKLQNLKILNLCNNELTTLSNGIGRLQNLQKLDLRF 336

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L +LP EIG L+ L+ L L +NQL +LP+ IG L NL  L +  N L ++P+EIG L+
Sbjct: 337 NQLTTLPKEIGKLQNLKVLDLYNNQLTTLPKKIGKLQNLKVLDLDYNQLTTLPKEIGQLQ 396

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           NL  L LN N  L  +P ++     L  +SL N P++
Sbjct: 397 NLRQLNLNHNQ-LTILPKDIEQLKKLNTLSLRNNPIA 432



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 93/174 (53%), Gaps = 24/174 (13%)

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
           DN LT LP ++G    L ELNL  N+++ L E+I  L NL++L L  N L  LP  IG L
Sbjct: 60  DNELTVLPKEIGKLQNLQELNLNYNKLTTLPEEIGQLQNLQILHLCENQLTTLPKEIGQL 119

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
           ++L+ L L  NKL +LP EIG L+ LQ L L   QL +LP+ IG L  L  LS+  N   
Sbjct: 120 QRLQILHLAHNKLTTLPEEIGQLQNLQELNLNGWQLSTLPKEIGKLQKLQVLSLDLNERT 179

Query: 509 SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           ++P+EIG L+                        NLQI+ L    L+ +P EI+
Sbjct: 180 TLPKEIGQLQ------------------------NLQILYLRANQLTNLPKEII 209



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 74/125 (59%), Gaps = 3/125 (2%)

Query: 439 KKLPSSIGNLRKLKCLDLE--ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
           + L  ++ N  +++ LDL   +N+L  LP EIG L+ LQ L L  N+L +LP  IG L N
Sbjct: 39  RNLTEALQNPNEVRILDLRNNDNELTVLPKEIGKLQNLQELNLNYNKLTTLPEEIGQLQN 98

Query: 497 LSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ 556
           L  L + EN L ++P+EIG L+ L  L+L  N  L  +P E+    NLQ ++L+   LS 
Sbjct: 99  LQILHLCENQLTTLPKEIGQLQRLQILHLAHNK-LTTLPEEIGQLQNLQELNLNGWQLST 157

Query: 557 IPSEI 561
           +P EI
Sbjct: 158 LPKEI 162


>gi|456875031|gb|EMF90265.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 526

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 157/432 (36%), Positives = 228/432 (52%), Gaps = 5/432 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L    +T LP  + KL  LE L L  N LA+LP +IG +  L  L L  N LT
Sbjct: 76  QNLQKLSLYGKQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLT 135

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           + P  +  LQ+L+ L L HN+L  LP  + KL  LK L+L  N+  T+  +I+ L  L  
Sbjct: 136 TFPKEIEKLQKLQKLSLAHNQLTTLPEEIGKLQKLKELHLDGNQFTTLPKEIEKLQKLKE 195

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+   LP E+ +L+NL  L+L  N    LPKEI     L  L+L  N    +P  
Sbjct: 196 LHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKE 255

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  NR  ++P+ +     L + ++    L++LP   +  L S+  +TL 
Sbjct: 256 IKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTLPKE-IGKLQSLQRLTLW 314

Query: 341 RNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
            N+ T  P   G  Q     ++N           G   + +NL ++ +  N  T+LP ++
Sbjct: 315 ENQLTTLPKEIGNLQNLQKLNLNNNPLTTLPKEIG---KLQNLQQLFLGGNQFTTLPKEI 371

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G    L +L+L  N+++ L ++I NL NL+ L L NN L  LP  IGNL+ L+ LDL  N
Sbjct: 372 GNLQNLQKLDLYYNKLTTLPKEIGNLQNLQKLDLYNNQLTTLPKEIGNLQSLESLDLSYN 431

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
            L +LP EIG L++L++L L  NQL +LP+ I  L  L  L +  N L ++PEEIG L+ 
Sbjct: 432 DLTTLPKEIGKLQKLKKLELYYNQLKTLPKEIEKLQKLETLGLYGNQLTTLPEEIGKLQK 491

Query: 520 LHTLYLNDNTCL 531
           L  L L DN  L
Sbjct: 492 LQELDLGDNPSL 503



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 129/374 (34%), Positives = 189/374 (50%), Gaps = 50/374 (13%)

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           +I  L NL  LS+   ++  LP E+G+L+ L  LDL +N L  LPKEIG    L  L L 
Sbjct: 71  EIGNLQNLQKLSLYGKQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGKLQKLDDLRLP 130

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           +N+L   P  +  L  L +L L++N+L ++PE + K   L E +++G   ++LP  +   
Sbjct: 131 NNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPEEIGKLQKLKELHLDGNQFTTLPKEI-EK 189

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           L  +  + L  N+FT  P                  +I K+        +NL  +N+  N
Sbjct: 190 LQKLKELHLGSNRFTTLPK-----------------EIKKL--------QNLQWLNLDSN 224

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
             T+LP ++     L  LNL +N+ + L ++I+ L NL+ L L +N    LP  IGNL+K
Sbjct: 225 RFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQK 284

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG------------------ 492
           L+ L L  N+L +LP EIG L+ LQRL L  NQL +LP+ IG                  
Sbjct: 285 LQKLSLAHNQLTTLPKEIGKLQSLQRLTLWENQLTTLPKEIGNLQNLQKLNLNNNPLTTL 344

Query: 493 -----HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIM 547
                 L NL  L +G N   ++P+EIG L+NL  L L  N  L  +P E+    NLQ +
Sbjct: 345 PKEIGKLQNLQQLFLGGNQFTTLPKEIGNLQNLQKLDLYYNK-LTTLPKEIGNLQNLQKL 403

Query: 548 SLDNCPLSQIPSEI 561
            L N  L+ +P EI
Sbjct: 404 DLYNNQLTTLPKEI 417



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/282 (32%), Positives = 161/282 (57%), Gaps = 8/282 (2%)

Query: 262 TMLVTLDLQ----HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           T + TLDLQ    +++L N+P  +GNL NL +L L   +L ++P+ + K   L   ++  
Sbjct: 49  TDVRTLDLQAQDSNHKLTNLPKEIGNLQNLQKLSLYGKQLTTLPKEIGKLQKLEWLDLNY 108

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
            +L++LP   +  L  ++++ L  N+ T +P     +   +  ++  HNQ+  +P  I  
Sbjct: 109 NSLATLPKE-IGKLQKLDDLRLPNNQLTTFPK-EIEKLQKLQKLSLAHNQLTTLPEEI-G 165

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           + + L ++++  N  T+LP ++     L EL+LG+N+ + L ++I+ L NL+ L L +N 
Sbjct: 166 KLQKLKELHLDGNQFTTLPKEIEKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNR 225

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
              LP  I  L+ L+ L+L+ N+  +LP EI  L+ LQ L L SN+  +LP+ IG+L  L
Sbjct: 226 FTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKL 285

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
             LS+  N L ++P+EIG L++L  L L +N  L  +P E+ 
Sbjct: 286 QKLSLAHNQLTTLPKEIGKLQSLQRLTLWENQ-LTTLPKEIG 326



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 107/315 (33%), Positives = 163/315 (51%), Gaps = 26/315 (8%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L+L  +  T LP  ++KL +L+ L L  N+  +LP +I  + NL  L L  N 
Sbjct: 212 KLQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNR 271

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
            T+LP  + NLQ+L+ L L HN+L  LP  + KL SL+ L L  N++ T+  +I  L NL
Sbjct: 272 FTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWENQLTTLPKEIGNLQNL 331

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++ +N +  LP E+G+L+NL  L L  N    LPKEIGN   L  LDL +N+L  +P
Sbjct: 332 QKLNLNNNPLTTLPKEIGKLQNLQQLFLGGNQFTTLPKEIGNLQNLQKLDLYYNKLTTLP 391

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +GNL NL +L L  N+L ++P+                         + +L S+ ++ 
Sbjct: 392 KEIGNLQNLQKLDLYNNQLTTLPKE------------------------IGNLQSLESLD 427

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           LS N  T  P              + +NQ+  +P  I  + + L  + +  N LT+LP +
Sbjct: 428 LSYNDLTTLPKEIGKLQKLKKLELY-YNQLKTLPKEI-EKLQKLETLGLYGNQLTTLPEE 485

Query: 399 LGTWVGLTELNLGTN 413
           +G    L EL+LG N
Sbjct: 486 IGKLQKLQELDLGDN 500


>gi|418744965|ref|ZP_13301310.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794296|gb|EKR92206.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 465

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 141/390 (36%), Positives = 220/390 (56%), Gaps = 3/390 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++ +L L++  +  L   V  L +L EL L  N+LA+LP++IG + NL  L L  N L +
Sbjct: 39  DVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQLENLQVLSLYNNRLRT 98

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  LQ LR L+L +N+L  LP  + +L +L++L L  NR+K++  +I  L  L  L
Sbjct: 99  LPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQVLNLHNNRLKSLPKEIGKLQKLKRL 158

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++R LP E+  L++L  L L+ + L+  P+EIG    L  L L  N+LV +   +
Sbjct: 159 YLGGNQLRTLPQEIETLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEI 218

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L +L RL L  N+L ++P  + K  +L E N+    L +LP   + +L ++ N+ L  
Sbjct: 219 GKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQE-IGALENLQNLHLYS 277

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F   P     Q  ++  ++  HNQ+  +P  I  + + L  + ++DN LT+LP ++  
Sbjct: 278 NQFRTLPK-QIWQLQNLQDLHLAHNQLTVLPQEI-GKLEKLEDLYLEDNQLTTLPKEIWK 335

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L+L  NQ+  L E+I  L  L+ L LSNN L+ LP  IG L KLK LDL  N+L
Sbjct: 336 LEKLKYLDLANNQLRLLPEEIGKLEKLKYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQL 395

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            +LP EIG L++L+ L L  N   + P+ I
Sbjct: 396 ATLPKEIGKLEKLEDLDLSGNPFTTFPKEI 425



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 220/402 (54%), Gaps = 4/402 (0%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L  +L N   ++ L L  ++L  L   V  L +L+ L L  N++ T+  +I  L NL +
Sbjct: 29  DLDAALKNPMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQLENLQV 88

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+ +N++R LP E+G L+NL  L+L +N L  LP  IG    L  L+L +N L ++P  
Sbjct: 89  LSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQVLNLHNNRLKSLPKE 148

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L  L RL L  N+L ++P+ +     L E ++    L + P+ +   L S+  + L 
Sbjct: 149 IGKLQKLKRLYLGGNQLRTLPQEIETLQDLEELHLSRDQLKTFPEEI-GKLRSLKRLILD 207

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+     S    +  S+  +  E+NQ+  +P  I  + +NL ++N+ +N L +LP ++G
Sbjct: 208 SNQLVVL-SQEIGKLRSLERLILENNQLATLPNEI-GKLQNLEELNLSNNQLVTLPQEIG 265

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L +NQ   L + I  L NL+ L L++N L  LP  IG L KL+ L LE+N+
Sbjct: 266 ALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGKLEKLEDLYLEDNQ 325

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L +LP EI  L++L+ L L +NQL  LP  IG L  L YL +  N L+ +P++IG LE L
Sbjct: 326 LTTLPKEIWKLEKLKYLDLANNQLRLLPEEIGKLEKLKYLDLSNNQLRLLPQKIGKLEKL 385

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L L++N  L  +P E+     L+ + L   P +  P EIV
Sbjct: 386 KYLDLSNNQ-LATLPKEIGKLEKLEDLDLSGNPFTTFPKEIV 426



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 120/340 (35%), Positives = 188/340 (55%), Gaps = 9/340 (2%)

Query: 225 DNKI-RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
           DNK+ R+L   L    ++ +L L  + L  L +E+G    L  L+L++N+L  +P+ +G 
Sbjct: 23  DNKVYRDLDAALKNPMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQ 82

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L NL  L L  NRL ++P+ +    +L E N+E   L++LP+G+   L ++  + L  N+
Sbjct: 83  LENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGI-GQLENLQVLNLHNNR 141

Query: 344 FTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
             + P   G   +   +Y      NQ+  +P  I +  ++L ++++  + L + P ++G 
Sbjct: 142 LKSLPKEIGKLQKLKRLY---LGGNQLRTLPQEIET-LQDLEELHLSRDQLKTFPEEIGK 197

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L L +NQ+  LS++I  L +LE L+L NN L  LP+ IG L+ L+ L+L  N+L
Sbjct: 198 LRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQL 257

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            +LP EIG L+ LQ L L SNQ  +LP+ I  L NL  L +  N L  +P+EIG LE L 
Sbjct: 258 VTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGKLEKLE 317

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            LYL DN  L  +P E+     L+ + L N  L  +P EI
Sbjct: 318 DLYLEDNQ-LTTLPKEIWKLEKLKYLDLANNQLRLLPEEI 356



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 103/180 (57%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L+LS + +  LP  +  L +L+ L+LY N+  +LP QI  + NL  L LA N 
Sbjct: 243 KLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQ 302

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT LP  +  L++L  L L  N+L  LP  ++KL  LK L L  N+++ +  +I  L  L
Sbjct: 303 LTVLPQEIGKLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLLPEEIGKLEKL 362

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L + +N++R LP ++G+L+ L  LDL++N L  LPKEIG    L  LDL  N     P
Sbjct: 363 KYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIGKLEKLEDLDLSGNPFTTFP 422



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 119/204 (58%), Gaps = 1/204 (0%)

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
            Y  + E N++ +          ++  +++  + L +L  ++GT   L ELNL  NQ++ 
Sbjct: 16  FYKCDAEDNKVYRDLDAALKNPMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLAT 75

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L  +I  L NL+VL L NN L+ LP  +G L+ L+ L+LE N+L +LPN IG L+ LQ L
Sbjct: 76  LPNEIGQLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQVL 135

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L +N+L SLP+ IG L  L  L +G N L+++P+EI TL++L  L+L+ +  L   P E
Sbjct: 136 NLHNNRLKSLPKEIGKLQKLKRLYLGGNQLRTLPQEIETLQDLEELHLSRDQ-LKTFPEE 194

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    +L+ + LD+  L  +  EI
Sbjct: 195 IGKLRSLKRLILDSNQLVVLSQEI 218


>gi|418730417|ref|ZP_13288911.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774626|gb|EKR54630.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 428

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 145/405 (35%), Positives = 225/405 (55%), Gaps = 49/405 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS  + T LP  +E+L +L++LYL+ N+L +LP +IG + NL  L L+ N LT 
Sbjct: 49  NVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTI 108

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L+ L+ LDL  N+L  LP+ + KL +L+ LYL  N++ T              
Sbjct: 109 LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTT-------------- 154

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
                    LP E G+L+NL  L+L+ N L  LP+EIG    L TL+L+ N+L  +   +
Sbjct: 155 ---------LPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI 205

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L LS N+L ++P  + K  +L+  N+ G  L++L            +I + +
Sbjct: 206 EQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTL------------SIEIGK 253

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                          +++++N   NQ+  +P  I  + +NL  +N+  N LT+L +++G 
Sbjct: 254 -------------LQNLHTLNLSDNQLTTLPIEI-GKLQNLHTLNLSGNQLTTLSIEIGK 299

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L +LNL +NQ++ LS++I+ L NL+ L LS N L  LP  IG L+ L+ L+L  N+L
Sbjct: 300 LQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQL 359

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            +LP EIG L+ LQ L L  N+L++ P+ IG L NL  L +G +N
Sbjct: 360 TALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 404



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/365 (39%), Positives = 209/365 (57%), Gaps = 5/365 (1%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N   +RVLDL       LP  + +L +L+ LYL  NR+KT+  +I  L NL  L
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++  N++  LP E+G+L+NL  LDL  N L  LP EIG    L TL L  N+L  +P   
Sbjct: 100 NLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRES 159

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L LS N+L ++P+ + +  +L   N++   L++L   +   L ++  + LS 
Sbjct: 160 GKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI-EQLKNLQTLNLSD 218

Query: 342 NKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           N+ T  P   G  Q  +++++N   NQ+  +   I  + +NL  +N+ DN LT+LP+++G
Sbjct: 219 NQLTTLPIEIGKLQ--NLHTLNLSGNQLTTLSIEI-GKLQNLHTLNLSDNQLTTLPIEIG 275

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  LNL  NQ++ LS +I  L NL+ L L +N L  L   I  L+ L+ L L  N+
Sbjct: 276 KLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNR 335

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L  LP EIG L+ LQ L L +NQL +LP  IG L NL  LS+ +N L + P+EIG L+NL
Sbjct: 336 LVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNL 395

Query: 521 HTLYL 525
            TLYL
Sbjct: 396 QTLYL 400



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 138/368 (37%), Positives = 197/368 (53%), Gaps = 27/368 (7%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           ++++L L      T+  +I+ L NL  L + DN+++ LP E+G+LKNL  L+L+ N L  
Sbjct: 49  NVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTI 108

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LPKEIG    L  LDL  N L  +P  +G L NL  L LS N+L ++P    K  +L E 
Sbjct: 109 LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQEL 168

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           N+    L++LP  +                          Q  ++ ++N + NQ+  + +
Sbjct: 169 NLSDNQLTTLPQEI-------------------------GQLQNLQTLNLKSNQLTTL-F 202

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
               + KNL  +N+ DN LT+LP+++G    L  LNL  NQ++ LS +I  L NL  L L
Sbjct: 203 KEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNL 262

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           S+N L  LP  IG L+ L  L+L  N+L +L  EIG L+ LQ L L SNQL +L + I  
Sbjct: 263 SDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQ 322

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L NL  LS+  N L  +P+EIG L+NL  L L +N  L  +P E+    NLQ +SL    
Sbjct: 323 LKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQ-LTALPIEIGQLQNLQTLSLYKNR 381

Query: 554 LSQIPSEI 561
           L   P EI
Sbjct: 382 LMTFPKEI 389



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/317 (34%), Positives = 179/317 (56%), Gaps = 4/317 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS + +T LP  + KL +L+ L LY N+L  LP +IG + NL  L L+ N LT
Sbjct: 94  KNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLT 153

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP     L+ L+ L+L  N+L  LP  + +L +L+ L L+ N++ T+  +I+ L NL  
Sbjct: 154 TLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQT 213

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++ DN++  LP E+G+L+NL TL+L+ N L  L  EIG    L TL+L  N+L  +P  
Sbjct: 214 LNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIE 273

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LS N+L ++   + K  +L + N+    L++L    +  L ++  ++LS
Sbjct: 274 IGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKE-IEQLKNLQTLSLS 332

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P     Q  ++  +N  +NQ+  +P  I  + +NL  +++  N L + P ++G
Sbjct: 333 YNRLVILPK-EIGQLQNLQELNLWNNQLTALPIEI-GQLQNLQTLSLYKNRLMTFPKEIG 390

Query: 401 TWVGLTELNLGT-NQIS 416
               L  L LG  NQ S
Sbjct: 391 QLKNLQTLYLGGHNQFS 407



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/272 (35%), Positives = 150/272 (55%), Gaps = 14/272 (5%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L LS + +T LP    KL +L+EL L  N+L +LP +IG + NL  L L  N 
Sbjct: 138 KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 197

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+L   +  L+ L+ L+L  N+L  LP+ + KL +L  L L  N++ T+  +I  L NL
Sbjct: 198 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNL 257

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++ DN++  LP E+G+L+NL TL+L+ N L  L  EIG    L  L+L  N+L  + 
Sbjct: 258 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLS 317

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +  L NL  L LSYNRL  +P+ + +  +L E N+    L++LP   +  L ++  ++
Sbjct: 318 KEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE-IGQLQNLQTLS 376

Query: 339 LSRNKFTAYPS-------------GGPTQFTS 357
           L +N+   +P              GG  QF+S
Sbjct: 377 LYKNRLMTFPKEIGQLKNLQTLYLGGHNQFSS 408



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/144 (45%), Positives = 88/144 (61%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L++ +QN +N+ VL LS      LP  I  L+ L+ L L +N+L++LP EIG LK LQ L
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L SNQL  LP+ IG L NL  L + +N L  +P EIG L+NL TLYL+ N  L  +P E
Sbjct: 100 NLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQ-LTTLPRE 158

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
                NLQ ++L +  L+ +P EI
Sbjct: 159 SGKLENLQELNLSDNQLTTLPQEI 182



 Score = 42.0 bits (97), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
           + L +A+ +  N+  L +   N  ++P+EI  L+NL  LYL DN  L  +P E+    NL
Sbjct: 38  MDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNR-LKTLPKEIGQLKNL 96

Query: 545 QIMSLDNCPLSQIPSEI 561
           Q ++L +  L+ +P EI
Sbjct: 97  QELNLSSNQLTILPKEI 113


>gi|24215148|ref|NP_712629.1| hypothetical protein LA_2448 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074467|ref|YP_005988784.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|417776841|ref|ZP_12424673.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672944|ref|ZP_13234274.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|24196218|gb|AAN49647.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458256|gb|AER02801.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|410573337|gb|EKQ36387.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580051|gb|EKQ47882.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 428

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 145/405 (35%), Positives = 224/405 (55%), Gaps = 49/405 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS  + T LP  +E+L +L++LYL+ N+L +LP +IG + NL  L L+ N LT 
Sbjct: 49  NVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTI 108

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L+ L+ LDL  N+L  LP+ + KL +L+ LYL  N++ T              
Sbjct: 109 LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTT-------------- 154

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
                    LP E G+L+NL  L+L+ N L  LP+EIG    L TL+L+ N+L  +   +
Sbjct: 155 ---------LPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI 205

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L LS N+L ++P  + K  +L+  N+    L++LP            I + +
Sbjct: 206 EQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLP------------IEIGK 253

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                          +++++N   NQ+  +P  I  + +NL  +N+  N LT+L +++G 
Sbjct: 254 -------------LQNLHTLNLSDNQLTTLPIEI-GKLQNLHTLNLSGNQLTTLSIEIGK 299

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L +LNL +NQ++ LS++I+ L NL+ L LS N L  LP  IG L+ L+ L+L  N+L
Sbjct: 300 LQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQL 359

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            +LP EIG L+ LQ L L  N+L++ P+ IG L NL  L +G +N
Sbjct: 360 TALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 404



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 145/365 (39%), Positives = 210/365 (57%), Gaps = 5/365 (1%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N   +RVLDL       LP  + +L +L+ LYL  NR+KT+  +I  L NL  L
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++  N++  LP E+G+L+NL  LDL  N L  LP EIG    L TL L  N+L  +P   
Sbjct: 100 NLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRES 159

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L LS N+L ++P+ + +  +L   N++   L++L   +   L ++  + LS 
Sbjct: 160 GKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI-EQLKNLQTLNLSD 218

Query: 342 NKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           N+ T  P   G  Q  +++++N   NQ+  +P  I  + +NL  +N+ DN LT+LP+++G
Sbjct: 219 NQLTTLPIEIGKLQ--NLHTLNLSDNQLTTLPIEI-GKLQNLHTLNLSDNQLTTLPIEIG 275

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  LNL  NQ++ LS +I  L NL+ L L +N L  L   I  L+ L+ L L  N+
Sbjct: 276 KLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNR 335

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L  LP EIG L+ LQ L L +NQL +LP  IG L NL  LS+ +N L + P+EIG L+NL
Sbjct: 336 LVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNL 395

Query: 521 HTLYL 525
            TLYL
Sbjct: 396 QTLYL 400



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/368 (37%), Positives = 196/368 (53%), Gaps = 27/368 (7%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           ++++L L      T+  +I+ L NL  L + DN+++ LP E+G+LKNL  L+L+ N L  
Sbjct: 49  NVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTI 108

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LPKEIG    L  LDL  N L  +P  +G L NL  L LS N+L ++P    K  +L E 
Sbjct: 109 LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQEL 168

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           N+    L++LP  +                          Q  ++ ++N + NQ+  + +
Sbjct: 169 NLSDNQLTTLPQEI-------------------------GQLQNLQTLNLKSNQLTTL-F 202

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
               + KNL  +N+ DN LT+LP+++G    L  LNL  NQ++ L  +I  L NL  L L
Sbjct: 203 KEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNL 262

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           S+N L  LP  IG L+ L  L+L  N+L +L  EIG L+ LQ L L SNQL +L + I  
Sbjct: 263 SDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQ 322

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L NL  LS+  N L  +P+EIG L+NL  L L +N  L  +P E+    NLQ +SL    
Sbjct: 323 LKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQ-LTALPIEIGQLQNLQTLSLYKNR 381

Query: 554 LSQIPSEI 561
           L   P EI
Sbjct: 382 LMTFPKEI 389



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/317 (35%), Positives = 180/317 (56%), Gaps = 4/317 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS + +T LP  + KL +L+ L LY N+L  LP +IG + NL  L L+ N LT
Sbjct: 94  KNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLT 153

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP     L+ L+ L+L  N+L  LP  + +L +L+ L L+ N++ T+  +I+ L NL  
Sbjct: 154 TLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQT 213

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++ DN++  LP E+G+L+NL TL+L+ N L  LP EIG    L TL+L  N+L  +P  
Sbjct: 214 LNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIE 273

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LS N+L ++   + K  +L + N+    L++L    +  L ++  ++LS
Sbjct: 274 IGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKE-IEQLKNLQTLSLS 332

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P     Q  ++  +N  +NQ+  +P  I  + +NL  +++  N L + P ++G
Sbjct: 333 YNRLVILPK-EIGQLQNLQELNLWNNQLTALPIEI-GQLQNLQTLSLYKNRLMTFPKEIG 390

Query: 401 TWVGLTELNLGT-NQIS 416
               L  L LG  NQ S
Sbjct: 391 QLKNLQTLYLGGHNQFS 407



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/272 (35%), Positives = 150/272 (55%), Gaps = 14/272 (5%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L LS + +T LP    KL +L+EL L  N+L +LP +IG + NL  L L  N 
Sbjct: 138 KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 197

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+L   +  L+ L+ L+L  N+L  LP+ + KL +L  L L  N++ T+  +I  L NL
Sbjct: 198 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNL 257

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++ DN++  LP E+G+L+NL TL+L+ N L  L  EIG    L  L+L  N+L  + 
Sbjct: 258 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLS 317

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +  L NL  L LSYNRL  +P+ + +  +L E N+    L++LP   +  L ++  ++
Sbjct: 318 KEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE-IGQLQNLQTLS 376

Query: 339 LSRNKFTAYPS-------------GGPTQFTS 357
           L +N+   +P              GG  QF+S
Sbjct: 377 LYKNRLMTFPKEIGQLKNLQTLYLGGHNQFSS 408



 Score = 42.0 bits (97), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
           + L +A+ +  N+  L +   N  ++P+EI  L+NL  LYL DN  L  +P E+    NL
Sbjct: 38  MDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNR-LKTLPKEIGQLKNL 96

Query: 545 QIMSLDNCPLSQIPSEI 561
           Q ++L +  L+ +P EI
Sbjct: 97  QELNLSSNQLTILPKEI 113


>gi|456825387|gb|EMF73783.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 428

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 145/405 (35%), Positives = 225/405 (55%), Gaps = 49/405 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS  + T LP  +E+L +L++LYL+ N+L +LP +IG + NL  L L+ N LT 
Sbjct: 49  NVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTI 108

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L+ L+ LDL  N+L  LP+ + KL +L+ LYL  N++ T              
Sbjct: 109 LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTT-------------- 154

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
                    LP E G+L+NL  L+L+ N L  LP+EIG    L TL+L+ N+L  +   +
Sbjct: 155 ---------LPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI 205

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L LS N+L ++P  + K  +L+  N+ G  L++L            +I + +
Sbjct: 206 EQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTL------------SIEIGK 253

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                          +++++N   NQ+  +P  I  + +NL  +N+  N LT+L +++G 
Sbjct: 254 -------------LQNLHTLNLSDNQLTTLPIEI-GKLQNLHTLNLSGNQLTTLSIEIGK 299

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L +LNL +NQ++ LS++I+ L NL+ L LS N L  LP  IG L+ L+ L+L  N+L
Sbjct: 300 LQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQL 359

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            +LP EIG L+ LQ L L  N+L++ P+ IG L NL  L +G +N
Sbjct: 360 TALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 404



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/365 (39%), Positives = 209/365 (57%), Gaps = 5/365 (1%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N   +RVLDL       LP  + +L +L+ LYL  NR+KT+  +I  L NL  L
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++  N++  LP E+G+L+NL  LDL  N L  LP EIG    L TL L  N+L  +P   
Sbjct: 100 NLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRES 159

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L LS N+L ++P+ + +  +L   N++   L++L   +   L ++  + LS 
Sbjct: 160 GKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI-EQLKNLQTLNLSD 218

Query: 342 NKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           N+ T  P   G  Q  +++++N   NQ+  +   I  + +NL  +N+ DN LT+LP+++G
Sbjct: 219 NQLTTLPIEIGKLQ--NLHTLNLSGNQLTTLSIEI-GKLQNLHTLNLSDNQLTTLPIEIG 275

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  LNL  NQ++ LS +I  L NL+ L L +N L  L   I  L+ L+ L L  N+
Sbjct: 276 KLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNR 335

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L  LP EIG L+ LQ L L +NQL +LP  IG L NL  LS+ +N L + P+EIG L+NL
Sbjct: 336 LVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNL 395

Query: 521 HTLYL 525
            TLYL
Sbjct: 396 QTLYL 400



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 138/368 (37%), Positives = 197/368 (53%), Gaps = 27/368 (7%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           ++++L L      T+  +I+ L NL  L + DN+++ LP E+G+LKNL  L+L+ N L  
Sbjct: 49  NVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTI 108

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LPKEIG    L  LDL  N L  +P  +G L NL  L LS N+L ++P    K  +L E 
Sbjct: 109 LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQEL 168

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           N+    L++LP  +                          Q  ++ ++N + NQ+  + +
Sbjct: 169 NLSDNQLTTLPQEI-------------------------GQLQNLQTLNLKSNQLTTL-F 202

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
               + KNL  +N+ DN LT+LP+++G    L  LNL  NQ++ LS +I  L NL  L L
Sbjct: 203 KEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNL 262

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           S+N L  LP  IG L+ L  L+L  N+L +L  EIG L+ LQ L L SNQL +L + I  
Sbjct: 263 SDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQ 322

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L NL  LS+  N L  +P+EIG L+NL  L L +N  L  +P E+    NLQ +SL    
Sbjct: 323 LKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQ-LTALPIEIGQLQNLQTLSLYKNR 381

Query: 554 LSQIPSEI 561
           L   P EI
Sbjct: 382 LMTFPKEI 389



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/317 (34%), Positives = 179/317 (56%), Gaps = 4/317 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS + +T LP  + KL +L+ L LY N+L  LP +IG + NL  L L+ N LT
Sbjct: 94  KNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLT 153

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP     L+ L+ L+L  N+L  LP  + +L +L+ L L+ N++ T+  +I+ L NL  
Sbjct: 154 TLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQT 213

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++ DN++  LP E+G+L+NL TL+L+ N L  L  EIG    L TL+L  N+L  +P  
Sbjct: 214 LNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIE 273

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LS N+L ++   + K  +L + N+    L++L    +  L ++  ++LS
Sbjct: 274 IGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKE-IEQLKNLQTLSLS 332

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P     Q  ++  +N  +NQ+  +P  I  + +NL  +++  N L + P ++G
Sbjct: 333 YNRLVILPK-EIGQLQNLQELNLWNNQLTALPIEI-GQLQNLQTLSLYKNRLMTFPKEIG 390

Query: 401 TWVGLTELNLGT-NQIS 416
               L  L LG  NQ S
Sbjct: 391 QLKNLQTLYLGGHNQFS 407



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/272 (35%), Positives = 150/272 (55%), Gaps = 14/272 (5%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L LS + +T LP    KL +L+EL L  N+L +LP +IG + NL  L L  N 
Sbjct: 138 KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 197

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+L   +  L+ L+ L+L  N+L  LP+ + KL +L  L L  N++ T+  +I  L NL
Sbjct: 198 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNL 257

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++ DN++  LP E+G+L+NL TL+L+ N L  L  EIG    L  L+L  N+L  + 
Sbjct: 258 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLS 317

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +  L NL  L LSYNRL  +P+ + +  +L E N+    L++LP   +  L ++  ++
Sbjct: 318 KEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE-IGQLQNLQTLS 376

Query: 339 LSRNKFTAYPS-------------GGPTQFTS 357
           L +N+   +P              GG  QF+S
Sbjct: 377 LYKNRLMTFPKEIGQLKNLQTLYLGGHNQFSS 408



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/144 (45%), Positives = 88/144 (61%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L++ +QN +N+ VL LS      LP  I  L+ L+ L L +N+L++LP EIG LK LQ L
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L SNQL  LP+ IG L NL  L + +N L  +P EIG L+NL TLYL+ N  L  +P E
Sbjct: 100 NLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQ-LTTLPRE 158

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
                NLQ ++L +  L+ +P EI
Sbjct: 159 SGKLENLQELNLSDNQLTTLPQEI 182



 Score = 42.0 bits (97), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
           + L +A+ +  N+  L +   N  ++P+EI  L+NL  LYL DN  L  +P E+    NL
Sbjct: 38  MDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNR-LKTLPKEIGQLKNL 96

Query: 545 QIMSLDNCPLSQIPSEI 561
           Q ++L +  L+ +P EI
Sbjct: 97  QELNLSSNQLTILPKEI 113


>gi|255071327|ref|XP_002507745.1| predicted protein [Micromonas sp. RCC299]
 gi|226523020|gb|ACO69003.1| predicted protein [Micromonas sp. RCC299]
          Length = 419

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 144/402 (35%), Positives = 220/402 (54%), Gaps = 26/402 (6%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           I  +P  + +L+ L +L L GN+L S+P++IG +T+LT L L EN L S+P  +  L  L
Sbjct: 17  IGAVPAELGRLSALRKLNLEGNQLTSMPAEIGQLTSLTELSLGENQLRSVPAEIGQLTSL 76

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
             L+L  N+L  +P  + +LTSL  L L +N + +V  ++  L++L  L + +N++  LP
Sbjct: 77  TELNLFDNQLTSVPAEIGQLTSLVQLDLEYNHLTSVPAELWQLTSLERLILDNNQLTSLP 136

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            E+G+L +L  L L H  L  LP EIG  T L  + L  N+L ++P  +G L +L +L L
Sbjct: 137 AEIGQLTSLKELGLHHIQLTSLPAEIGQLTSLREVHLYGNQLTSLPAEIGQLTSLEKLYL 196

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
             N+L SVP  L +   L E +++   L++LP         I  +T              
Sbjct: 197 YGNQLTSVPAELWQLTSLEELDLKDNQLTNLP-------AEIGQLT-------------- 235

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
               S++ ++   NQ+  +P  I   A +L+++ +  N LTSLP ++G    L EL L  
Sbjct: 236 ----SLWQLHLSGNQLTSVPAEIGQLA-SLTELELNGNQLTSLPAEIGQLTSLKELELNG 290

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           NQ++ L  +I  L +L +L L +NLL  +P+ IG L  L  L+L  N+L S+P EIG L 
Sbjct: 291 NQLTSLPAEIGQLTSLRLLSLRDNLLTSVPAEIGQLTSLTELELHGNQLTSVPAEIGLLT 350

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            L+ L  + NQL SLP  IG LT+L  L +  N L S+P  I
Sbjct: 351 SLRGLGFKDNQLTSLPAEIGQLTSLRGLGLECNLLTSVPAAI 392



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/392 (35%), Positives = 228/392 (58%), Gaps = 7/392 (1%)

Query: 173 RVLDLR---HNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR 229
           RV++L       +  +P  + +L++L+ L L  N++ ++  +I  L++L+ LS+ +N++R
Sbjct: 5   RVVELELEWFGLIGAVPAELGRLSALRKLNLEGNQLTSMPAEIGQLTSLTELSLGENQLR 64

Query: 230 ELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTR 289
            +P E+G+L +L  L+L  N L  +P EIG  T LV LDL++N L ++P  L  L +L R
Sbjct: 65  SVPAEIGQLTSLTELNLFDNQLTSVPAEIGQLTSLVQLDLEYNHLTSVPAELWQLTSLER 124

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS 349
           L L  N+L S+P  + +   L E  +    L+SLP   +  LTS+  + L  N+ T+ P+
Sbjct: 125 LILDNNQLTSLPAEIGQLTSLKELGLHHIQLTSLP-AEIGQLTSLREVHLYGNQLTSLPA 183

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
               Q TS+  +    NQ+  +P  ++ +  +L ++++KDN LT+LP ++G    L +L+
Sbjct: 184 E-IGQLTSLEKLYLYGNQLTSVPAELW-QLTSLEELDLKDNQLTNLPAEIGQLTSLWQLH 241

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           L  NQ++ +  +I  L +L  L L+ N L  LP+ IG L  LK L+L  N+L SLP EIG
Sbjct: 242 LSGNQLTSVPAEIGQLASLTELELNGNQLTSLPAEIGQLTSLKELELNGNQLTSLPAEIG 301

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            L  L+ L L+ N L S+P  IG LT+L+ L +  N L S+P EIG L +L  L   DN 
Sbjct: 302 QLTSLRLLSLRDNLLTSVPAEIGQLTSLTELELHGNQLTSVPAEIGLLTSLRGLGFKDNQ 361

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L ++P E+   ++L+ + L+   L+ +P+ I
Sbjct: 362 -LTSLPAEIGQLTSLRGLGLECNLLTSVPAAI 392



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 140/375 (37%), Positives = 218/375 (58%), Gaps = 4/375 (1%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++P  L  L  LR L+L  N+L  +P  + +LTSL  L L  N++++V  +I  L++L+ 
Sbjct: 19  AVPAELGRLSALRKLNLEGNQLTSMPAEIGQLTSLTELSLGENQLRSVPAEIGQLTSLTE 78

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++ DN++  +P E+G+L +LV LDL +NHL  +P E+   T L  L L +N+L ++P  
Sbjct: 79  LNLFDNQLTSVPAEIGQLTSLVQLDLEYNHLTSVPAELWQLTSLERLILDNNQLTSLPAE 138

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L +L  L L + +L S+P  + +   L E ++ G  L+SLP   +  LTS+  + L 
Sbjct: 139 IGQLTSLKELGLHHIQLTSLPAEIGQLTSLREVHLYGNQLTSLP-AEIGQLTSLEKLYLY 197

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T+ P+    Q TS+  ++ + NQ+  +P  I  +  +L ++++  N LTS+P ++G
Sbjct: 198 GNQLTSVPA-ELWQLTSLEELDLKDNQLTNLPAEI-GQLTSLWQLHLSGNQLTSVPAEIG 255

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               LTEL L  NQ++ L  +I  L +L+ L L+ N L  LP+ IG L  L+ L L +N 
Sbjct: 256 QLASLTELELNGNQLTSLPAEIGQLTSLKELELNGNQLTSLPAEIGQLTSLRLLSLRDNL 315

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L S+P EIG L  L  L L  NQL S+P  IG LT+L  L   +N L S+P EIG L +L
Sbjct: 316 LTSVPAEIGQLTSLTELELHGNQLTSVPAEIGLLTSLRGLGFKDNQLTSLPAEIGQLTSL 375

Query: 521 HTLYLNDNTCLNNIP 535
             L L  N  L ++P
Sbjct: 376 RGLGLECN-LLTSVP 389



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 129/367 (35%), Positives = 208/367 (56%), Gaps = 3/367 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+L  + +T +P  + +LT L EL L  N+L S+P++IG +T+LT L L +N LTS+P  
Sbjct: 33  LNLEGNQLTSMPAEIGQLTSLTELSLGENQLRSVPAEIGQLTSLTELNLFDNQLTSVPAE 92

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L  LDL +N L  +P  +++LTSL+ L L  N++ ++  +I  L++L  L +  
Sbjct: 93  IGQLTSLVQLDLEYNHLTSVPAELWQLTSLERLILDNNQLTSLPAEIGQLTSLKELGLHH 152

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
            ++  LP E+G+L +L  + L  N L  LP EIG  T L  L L  N+L ++P  L  L 
Sbjct: 153 IQLTSLPAEIGQLTSLREVHLYGNQLTSLPAEIGQLTSLEKLYLYGNQLTSVPAELWQLT 212

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L  L L  N+L ++P  + +   L + ++ G  L+S+P   +  L S+  + L+ N+ T
Sbjct: 213 SLEELDLKDNQLTNLPAEIGQLTSLWQLHLSGNQLTSVP-AEIGQLASLTELELNGNQLT 271

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P+    Q TS+  +    NQ+  +P  I  +  +L  ++++DNLLTS+P ++G    L
Sbjct: 272 SLPA-EIGQLTSLKELELNGNQLTSLPAEI-GQLTSLRLLSLRDNLLTSVPAEIGQLTSL 329

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
           TEL L  NQ++ +  +I  L +L  L   +N L  LP+ IG L  L+ L LE N L S+P
Sbjct: 330 TELELHGNQLTSVPAEIGLLTSLRGLGFKDNQLTSLPAEIGQLTSLRGLGLECNLLTSVP 389

Query: 466 NEIGFLK 472
             I  L+
Sbjct: 390 AAIRELR 396



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/295 (35%), Positives = 171/295 (57%), Gaps = 3/295 (1%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           +++ LDL  + +T +P  + +LT LE L L  N+L SLP++IG +T+L  LGL    LTS
Sbjct: 98  SLVQLDLEYNHLTSVPAELWQLTSLERLILDNNQLTSLPAEIGQLTSLKELGLHHIQLTS 157

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L  LR + L  N+L  LP  + +LTSL+ LYL  N++ +V  ++  L++L  L
Sbjct: 158 LPAEIGQLTSLREVHLYGNQLTSLPAEIGQLTSLEKLYLYGNQLTSVPAELWQLTSLEEL 217

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            ++DN++  LP E+G+L +L  L L+ N L  +P EIG    L  L+L  N+L ++P  +
Sbjct: 218 DLKDNQLTNLPAEIGQLTSLWQLHLSGNQLTSVPAEIGQLASLTELELNGNQLTSLPAEI 277

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L +L  L L+ N+L S+P  + +   L   ++    L+S+P   +  LTS+  + L  
Sbjct: 278 GQLTSLKELELNGNQLTSLPAEIGQLTSLRLLSLRDNLLTSVP-AEIGQLTSLTELELHG 336

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           N+ T+ P+      TS+  + F+ NQ+  +P  I  +  +L  + ++ NLLTS+P
Sbjct: 337 NQLTSVPA-EIGLLTSLRGLGFKDNQLTSLPAEI-GQLTSLRGLGLECNLLTSVP 389


>gi|421084250|ref|ZP_15545113.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|410433150|gb|EKP77498.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 429

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 150/415 (36%), Positives = 216/415 (52%), Gaps = 31/415 (7%)

Query: 145 YVTNLTCLGLAEN----SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           ++ NL+C   AE     +   L  +L N   +RVL L   KL  LP  + +L +LK+L L
Sbjct: 19  FLINLSCKIQAEEVEPEAYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDL 78

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
             N++  +  +I  L NL  L +  N +  LP E+G+L+NL  L+L    L  LPKEIG 
Sbjct: 79  GHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQ 138

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  LDL  N L  +P  +G L NL RL L  NRL ++P  + +  +L E ++    L
Sbjct: 139 LRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKL 198

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
           ++LP  +   L ++  + L RN+ T  P                             + +
Sbjct: 199 TTLPKEI-RQLRNLQELDLHRNQLTTLPKE-------------------------IGQLQ 232

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           NL  +N+    LT+LP ++G    L  LNL  NQ++ L ++I  L NLE+LVL  N +  
Sbjct: 233 NLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITA 292

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           LP  IG L+ L+ LDL +N+L +LP EIG L+ LQ L L  NQL +LP+ I  L NL  L
Sbjct: 293 LPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVL 352

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            +  N L ++P+EIG L+NL  L L++N  L   P E+    NLQ + L   PLS
Sbjct: 353 DLDNNQLTTLPKEIGQLQNLQELCLDENQ-LTTFPKEIRQLKNLQELHLYLNPLS 406



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 133/364 (36%), Positives = 206/364 (56%), Gaps = 7/364 (1%)

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
           ++  L L+E  LT+LP  +  LQ L++LDL HN+L  LP  + +L +L+ L L FN + T
Sbjct: 49  DVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTT 108

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
           +  ++  L NL  L++   K+  LP E+G+L+NL  LDL+ N L  LPKE+G    L  L
Sbjct: 109 LPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 168

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD-- 325
           DL  N L  +P  +G L NL  L L+ N+L ++P+ + +  +L E ++    L++LP   
Sbjct: 169 DLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEI 228

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
           G L +L ++N I     + T  P     +  ++ ++N   NQ+  +P  I    +NL  +
Sbjct: 229 GQLQNLKTLNLIV---TQLTTLPKE-IGELQNLKTLNLLDNQLTTLPKEI-GELQNLEIL 283

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
            +++N +T+LP ++G    L  L+L  NQ++ L ++I  L NL+ L L  N L  LP  I
Sbjct: 284 VLRENRITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEI 343

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
             L+ L+ LDL+ N+L +LP EIG L+ LQ L L  NQL + P+ I  L NL  L +  N
Sbjct: 344 EQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 403

Query: 506 NLQS 509
            L S
Sbjct: 404 PLSS 407



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 128/345 (37%), Positives = 197/345 (57%), Gaps = 4/345 (1%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L + + K+  LP E+ +L+NL  LDL HN L  LPKEIG    L  LDL  N L  
Sbjct: 49  DVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTT 108

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L NL RL L+  +L ++P+ + +  +L E ++   +L++LP  +   L ++  
Sbjct: 109 LPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEV-GQLENLQR 167

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L +N+    P     Q  ++  ++   N++  +P  I  + +NL ++++  N LT+LP
Sbjct: 168 LDLHQNRLATLPME-IGQLKNLQELDLNSNKLTTLPKEI-RQLRNLQELDLHRNQLTTLP 225

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  LNL   Q++ L ++I  L NL+ L L +N L  LP  IG L+ L+ L L
Sbjct: 226 KEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVL 285

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
            EN++ +LP EIG L+ LQRL L  NQL +LP+ IG L NL  L + EN L ++P+EI  
Sbjct: 286 RENRITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQ 345

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+NL  L L DN  L  +P E+    NLQ + LD   L+  P EI
Sbjct: 346 LQNLRVLDL-DNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI 389



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 138/381 (36%), Positives = 205/381 (53%), Gaps = 26/381 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS+  +T LP  +++L +L+ L L  N+L +LP +IG + NL  L L+ NSLT+LP  
Sbjct: 53  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L+L   KL  LP  + +L +L+ L L FN + T+  ++  L NL  L +  
Sbjct: 113 VGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQ 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL  LDL  N L  LPKEI     L  LDL  N+L  +P  +G L 
Sbjct: 173 NRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L   +L ++P+ + +  +L   N+    L++LP   +  L ++  + L  N+ T
Sbjct: 233 NLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKE-IGELQNLEILVLRENRIT 291

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           A P                             + +NL ++++  N LT+LP ++G    L
Sbjct: 292 ALPKE-------------------------IGQLQNLQRLDLHQNQLTTLPKEIGQLQNL 326

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            EL L  NQ++ L ++I+ L NL VL L NN L  LP  IG L+ L+ L L+EN+L + P
Sbjct: 327 QELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFP 386

Query: 466 NEIGFLKELQRLILQSNQLVS 486
            EI  LK LQ L L  N L S
Sbjct: 387 KEIRQLKNLQELHLYLNPLSS 407



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/315 (35%), Positives = 181/315 (57%), Gaps = 3/315 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS +S+T LP  V +L +L+ L L   KL +LP +IG + NL  L L+ NSLT+
Sbjct: 95  NLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTT 154

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L+ L+ LDL  N+L  LPM + +L +L+ L L  N++ T+  +I+ L NL  L
Sbjct: 155 LPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQEL 214

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  LP E+G+L+NL TL+L    L  LPKEIG    L TL+L  N+L  +P  +
Sbjct: 215 DLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI 274

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L L  NR+ ++P+ + +  +L   ++    L++LP   +  L ++  + L  
Sbjct: 275 GELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTLPKE-IGQLQNLQELCLDE 333

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P     Q  ++  ++ ++NQ+  +P  I  + +NL ++ + +N LT+ P ++  
Sbjct: 334 NQLTTLPK-EIEQLQNLRVLDLDNNQLTTLPKEI-GQLQNLQELCLDENQLTTFPKEIRQ 391

Query: 402 WVGLTELNLGTNQIS 416
              L EL+L  N +S
Sbjct: 392 LKNLQELHLYLNPLS 406



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/333 (34%), Positives = 183/333 (54%), Gaps = 3/333 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  + +L +L+EL L  N L +LP ++G + NL  L L    LT
Sbjct: 71  QNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLT 130

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L+ LDL  N L  LP  V +L +L+ L L  NR+ T+  +I  L NL  
Sbjct: 131 TLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQE 190

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  NK+  LP E+ +L+NL  LDL  N L  LPKEIG    L TL+L   +L  +P  
Sbjct: 191 LDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKE 250

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L ++P+ + +  +L    +    +++LP   +  L ++  + L 
Sbjct: 251 IGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKE-IGQLQNLQRLDLH 309

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           +N+ T  P     Q  ++  +  + NQ+  +P  I  + +NL  +++ +N LT+LP ++G
Sbjct: 310 QNQLTTLPK-EIGQLQNLQELCLDENQLTTLPKEI-EQLQNLRVLDLDNNQLTTLPKEIG 367

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
               L EL L  NQ++   ++I+ L NL+ L L
Sbjct: 368 QLQNLQELCLDENQLTTFPKEIRQLKNLQELHL 400



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/222 (39%), Positives = 130/222 (58%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL+ + +T LP  + +L +L+EL L+ N+L +LP +IG + NL  L L    LT
Sbjct: 186 KNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLT 245

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ L+ L+L  N+L  LP  + +L +L+IL LR NRI  +  +I  L NL  
Sbjct: 246 TLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQR 305

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+L+NL  L L  N L  LPKEI     L  LDL +N+L  +P  
Sbjct: 306 LDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKE 365

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           +G L NL  L L  N+L + P+ + +  +L E ++    LSS
Sbjct: 366 IGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 407


>gi|440804073|gb|ELR24954.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 827

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 155/459 (33%), Positives = 242/459 (52%), Gaps = 28/459 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + I+++D S+  +T +PP V + T    L +Y NKL S+P  IG++  LT LGL EN+L 
Sbjct: 366 DKIVSVDYSRRQLTSVPPQVWQSTDATILNMYMNKLESIPPDIGHLKGLTALGLNENNLK 425

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  + NL +LR+LDLR+NKL  +P  +  LT L  L+LRFNR+  +  +I  L +L +
Sbjct: 426 KLPPEIGNLTRLRILDLRYNKLRTVPANIKHLTQLSKLFLRFNRLVELPEEIGSLQSLEI 485

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+R+N++  LP  L    NL  LD++ N L+ L   +     L  LD + N L  +P  
Sbjct: 486 LSVRNNQLTSLPRSLDLATNLKVLDVSTNKLQFLNCNLSPLIFLKELDCKQNMLSVLPTG 545

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
              L NLTR+ LS+N+    P  L++   L E ++EG  L+SL D  +  LT++  + L+
Sbjct: 546 WSTLSNLTRVDLSHNQFAQFPPALAELPSLAELDMEGNQLTSLVD--IGQLTALERLYLN 603

Query: 341 RNKF-TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
            N+  T  PS G  +  S+  +    NQ+  +P G       L                 
Sbjct: 604 SNRLVTLPPSMG--KLRSLKYLQLRANQLTSLPEGTSCVMAGLE---------------- 645

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
                L E +L +N  S++ E I  +  L+ L +++N++ KLP +I  L+ LK  +LE N
Sbjct: 646 -----LREADLSSNNFSEMPEAIL-VSTLQNLSITDNVMTKLPPTITRLQSLKTCNLEGN 699

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +LESL   +  L  L  L L  N++ ++P  +  +++L  L +  N L+S+P+ IG +  
Sbjct: 700 QLESLDPGVALLTNLVHLRLGYNEISTIPDEVSRMSSLQELDLEHNRLESLPQTIGGMLA 759

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  L LNDN   +    EL L   L  + +D  P+  IP
Sbjct: 760 LSLLVLNDNLLDDLP-NELVLLDKLTELKVDGNPMKNIP 797



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 87/162 (53%), Gaps = 7/162 (4%)

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
           +ID +P  I S       V+     LTS+P  +      T LN+  N++  +  DI +L 
Sbjct: 360 KIDPLPDKIVS-------VDYSRRQLTSVPPQVWQSTDATILNMYMNKLESIPPDIGHLK 412

Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
            L  L L+ N LKKLP  IGNL +L+ LDL  NKL ++P  I  L +L +L L+ N+LV 
Sbjct: 413 GLTALGLNENNLKKLPPEIGNLTRLRILDLRYNKLRTVPANIKHLTQLSKLFLRFNRLVE 472

Query: 487 LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           LP  IG L +L  LSV  N L S+P  +    NL  L ++ N
Sbjct: 473 LPEEIGSLQSLEILSVRNNQLTSLPRSLDLATNLKVLDVSTN 514


>gi|410940039|ref|ZP_11371859.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410784848|gb|EKR73819.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 473

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 145/431 (33%), Positives = 223/431 (51%), Gaps = 26/431 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++L L+L  S +T LP  +E+L +LE L L G  L +LP +IG +  L  L L+ N L +
Sbjct: 51  DVLALELYDSQLTTLPKEIEQLQNLESLRLDGENLTTLPKEIGRLQKLEYLNLSNNRLVT 110

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  LQ+L+ L L  N+L  LP  + +L +L+ + L  NR+ T+  +I  L  L  L
Sbjct: 111 LPQEIGQLQKLKELSLEKNQLTTLPKEIGRLQNLQKINLSNNRLVTLPREIGKLQKLKEL 170

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  LP E+G+LK L  L +  N L  LP+E+     L  L L +N+L  +P  +
Sbjct: 171 YLEKNQLTTLPKEIGKLKKLKNLYICDNQLTILPEEVIQLQELEELSLDNNQLATLPKKI 230

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  L  L LS N+   +P+ + +   L   +++   L++LP G +  L  + N++LS 
Sbjct: 231 GRLQKLKLLFLSDNQFVILPKEIGQLQELEHLSLDDNQLATLPKG-IGKLQKLENLSLSN 289

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P                             R + L  + + DN L  L      
Sbjct: 290 NRFVVFPKA-------------------------IGRLQKLKALYLSDNQLAILSEQSLH 324

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L+L  N+ +   +++Q L NL+ L L+ N    LP  IG L+KL+ L L+ N+L
Sbjct: 325 LQKLEYLHLNHNRFTTFPKEVQQLQNLKDLHLNGNQFTILPQGIGQLQKLEYLFLDNNQL 384

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
             LP  IG L++L+ L L +NQL  LP+ IG L  L YL++  N L ++P+EI  L+NLH
Sbjct: 385 TILPQGIGKLQKLKELSLDNNQLTILPKGIGKLQKLEYLNLSNNQLTTLPKEIRKLQNLH 444

Query: 522 TLYLNDNTCLN 532
            L L     LN
Sbjct: 445 FLGLEGMPALN 455



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 197/403 (48%), Gaps = 27/403 (6%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
            L+L  ++L  LP  + +L +L+ L L    + T+  +I  L  L  L++ +N++  LP 
Sbjct: 54  ALELYDSQLTTLPKEIEQLQNLESLRLDGENLTTLPKEIGRLQKLEYLNLSNNRLVTLPQ 113

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+G+L+ L  L L  N L  LPKEIG    L  ++L +N LV +P  +G L  L  L L 
Sbjct: 114 EIGQLQKLKELSLEKNQLTTLPKEIGRLQNLQKINLSNNRLVTLPREIGKLQKLKELYLE 173

Query: 294 YNRLESVPETLSK-----------------------CVHLNEFNVEGCALSSLPDGLLSS 330
            N+L ++P+ + K                          L E +++   L++LP   +  
Sbjct: 174 KNQLTTLPKEIGKLKKLKNLYICDNQLTILPEEVIQLQELEELSLDNNQLATLPKK-IGR 232

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           L  +  + LS N+F   P     Q   +  ++ + NQ+  +P GI  + + L  +++ +N
Sbjct: 233 LQKLKLLFLSDNQFVILPK-EIGQLQELEHLSLDDNQLATLPKGI-GKLQKLENLSLSNN 290

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
                P  +G    L  L L  NQ++ LSE   +L  LE L L++N     P  +  L+ 
Sbjct: 291 RFVVFPKAIGRLQKLKALYLSDNQLAILSEQSLHLQKLEYLHLNHNRFTTFPKEVQQLQN 350

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           LK L L  N+   LP  IG L++L+ L L +NQL  LP+ IG L  L  LS+  N L  +
Sbjct: 351 LKDLHLNGNQFTILPQGIGQLQKLEYLFLDNNQLTILPQGIGKLQKLKELSLDNNQLTIL 410

Query: 511 PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           P+ IG L+ L  L L++N  L  +P E+    NL  + L+  P
Sbjct: 411 PKGIGKLQKLEYLNLSNNQ-LTTLPKEIRKLQNLHFLGLEGMP 452



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 172/334 (51%), Gaps = 26/334 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  ++LS + +  LP  + KL  L+ELYL  N+L +LP +IG +  L  L + +N LT
Sbjct: 142 QNLQKINLSNNRLVTLPREIGKLQKLKELYLEKNQLTTLPKEIGKLKKLKNLYICDNQLT 201

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP+ +  LQ+L  L L +N+L  LP  + +L  LK+L+L  N+   +  +I  L  L  
Sbjct: 202 ILPEEVIQLQELEELSLDNNQLATLPKKIGRLQKLKLLFLSDNQFVILPKEIGQLQELEH 261

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+ DN++  LP  +G+L+ L  L L++N     PK IG    L  L L  N+L  + + 
Sbjct: 262 LSLDDNQLATLPKGIGKLQKLENLSLSNNRFVVFPKAIGRLQKLKALYLSDNQLAILSEQ 321

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
             +L  L  L L++NR  + P+ + +  +L + ++ G                       
Sbjct: 322 SLHLQKLEYLHLNHNRFTTFPKEVQQLQNLKDLHLNG----------------------- 358

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+FT  P  G  Q   +  +  ++NQ+  +P GI  + + L ++++ +N LT LP  +G
Sbjct: 359 -NQFTILPQ-GIGQLQKLEYLFLDNNQLTILPQGI-GKLQKLKELSLDNNQLTILPKGIG 415

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
               L  LNL  NQ++ L ++I+ L NL  L L 
Sbjct: 416 KLQKLEYLNLSNNQLTTLPKEIRKLQNLHFLGLE 449



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/208 (37%), Positives = 123/208 (59%), Gaps = 2/208 (0%)

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q  ++ S+  +   +  +P  I  R + L  +N+ +N L +LP ++G    L EL+L  N
Sbjct: 71  QLQNLESLRLDGENLTTLPKEI-GRLQKLEYLNLSNNRLVTLPQEIGQLQKLKELSLEKN 129

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           Q++ L ++I  L NL+ + LSNN L  LP  IG L+KLK L LE+N+L +LP EIG LK+
Sbjct: 130 QLTTLPKEIGRLQNLQKINLSNNRLVTLPREIGKLQKLKELYLEKNQLTTLPKEIGKLKK 189

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L+ L +  NQL  LP  +  L  L  LS+  N L ++P++IG L+ L  L+L+DN  +  
Sbjct: 190 LKNLYICDNQLTILPEEVIQLQELEELSLDNNQLATLPKKIGRLQKLKLLFLSDNQFV-I 248

Query: 534 IPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +P E+     L+ +SLD+  L+ +P  I
Sbjct: 249 LPKEIGQLQELEHLSLDDNQLATLPKGI 276


>gi|456982914|gb|EMG19366.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 432

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 150/415 (36%), Positives = 216/415 (52%), Gaps = 31/415 (7%)

Query: 145 YVTNLTCLGLAEN----SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           ++ NL+C   AE     +   L  +L N   +RVL L   KL  LP  + +L +LK+L L
Sbjct: 19  FLINLSCKIQAEEVEPEAYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDL 78

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
             N++  +  +I  L NL  L +  N +  LP E+G+L+NL  L+L    L  LPKEIG 
Sbjct: 79  GHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQ 138

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  LDL  N L  +P  +G L NL RL L  NRL ++P  + +  +L E ++    L
Sbjct: 139 LRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKL 198

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
           ++LP  +   L ++  + L RN+ T  P                             + +
Sbjct: 199 TTLPKEI-RQLRNLQELDLHRNQLTTLPKE-------------------------IGQLQ 232

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           NL  +N+    LT+LP ++G    L  LNL  NQ++ L ++I  L NLE+LVL  N +  
Sbjct: 233 NLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITA 292

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           LP  IG L+ L+ LDL +N+L +LP EIG L+ LQ L L  NQL +LP+ I  L NL  L
Sbjct: 293 LPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVL 352

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            +  N L ++P+EIG L+NL  L L++N  L   P E+    NLQ + L   PLS
Sbjct: 353 DLDNNQLTTLPKEIGQLQNLQELCLDENQ-LTTFPKEIRQLKNLQELHLYLNPLS 406



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/364 (36%), Positives = 206/364 (56%), Gaps = 7/364 (1%)

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
           ++  L L+E  LT+LP  +  LQ L++LDL HN+L  LP  + +L +L+ L L FN + T
Sbjct: 49  DVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTT 108

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
           +  ++  L NL  L++   K+  LP E+G+L+NL  LDL+ N L  LPKE+G    L  L
Sbjct: 109 LPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 168

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD-- 325
           DL  N L  +P  +G L NL  L L+ N+L ++P+ + +  +L E ++    L++LP   
Sbjct: 169 DLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEI 228

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
           G L +L ++N I     + T  P     +  ++ ++N   NQ+  +P  I    +NL  +
Sbjct: 229 GQLQNLKTLNLIV---TQLTTLPKE-IGELQNLKTLNLLDNQLTTLPKEI-GELQNLEIL 283

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
            +++N +T+LP ++G    L  L+L  NQ++ L ++I  L NL+ L L  N L  LP  I
Sbjct: 284 VLRENRITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEI 343

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
             L+ L+ LDL+ N+L +LP EIG L+ LQ L L  NQL + P+ I  L NL  L +  N
Sbjct: 344 EQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 403

Query: 506 NLQS 509
            L S
Sbjct: 404 PLSS 407



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/345 (37%), Positives = 197/345 (57%), Gaps = 4/345 (1%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L + + K+  LP E+ +L+NL  LDL HN L  LPKEIG    L  LDL  N L  
Sbjct: 49  DVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTT 108

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L NL RL L+  +L ++P+ + +  +L E ++   +L++LP  +   L ++  
Sbjct: 109 LPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEV-GQLENLQR 167

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L +N+    P     Q  ++  ++   N++  +P  I  + +NL ++++  N LT+LP
Sbjct: 168 LDLHQNRLATLPME-IGQLKNLQELDLNSNKLTTLPKEI-RQLRNLQELDLHRNQLTTLP 225

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  LNL   Q++ L ++I  L NL+ L L +N L  LP  IG L+ L+ L L
Sbjct: 226 KEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVL 285

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
            EN++ +LP EIG L+ LQRL L  NQL +LP+ IG L NL  L + EN L ++P+EI  
Sbjct: 286 RENRITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQ 345

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+NL  L L DN  L  +P E+    NLQ + LD   L+  P EI
Sbjct: 346 LQNLRVLDL-DNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI 389



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 138/381 (36%), Positives = 205/381 (53%), Gaps = 26/381 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS+  +T LP  +++L +L+ L L  N+L +LP +IG + NL  L L+ NSLT+LP  
Sbjct: 53  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L+L   KL  LP  + +L +L+ L L FN + T+  ++  L NL  L +  
Sbjct: 113 VGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQ 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL  LDL  N L  LPKEI     L  LDL  N+L  +P  +G L 
Sbjct: 173 NRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L   +L ++P+ + +  +L   N+    L++LP   +  L ++  + L  N+ T
Sbjct: 233 NLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKE-IGELQNLEILVLRENRIT 291

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           A P                             + +NL ++++  N LT+LP ++G    L
Sbjct: 292 ALPKE-------------------------IGQLQNLQRLDLHQNQLTTLPKEIGQLQNL 326

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            EL L  NQ++ L ++I+ L NL VL L NN L  LP  IG L+ L+ L L+EN+L + P
Sbjct: 327 QELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFP 386

Query: 466 NEIGFLKELQRLILQSNQLVS 486
            EI  LK LQ L L  N L S
Sbjct: 387 KEIRQLKNLQELHLYLNPLSS 407



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/315 (35%), Positives = 181/315 (57%), Gaps = 3/315 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS +S+T LP  V +L +L+ L L   KL +LP +IG + NL  L L+ NSLT+
Sbjct: 95  NLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTT 154

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L+ L+ LDL  N+L  LPM + +L +L+ L L  N++ T+  +I+ L NL  L
Sbjct: 155 LPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQEL 214

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  LP E+G+L+NL TL+L    L  LPKEIG    L TL+L  N+L  +P  +
Sbjct: 215 DLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI 274

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L L  NR+ ++P+ + +  +L   ++    L++LP   +  L ++  + L  
Sbjct: 275 GELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTLPKE-IGQLQNLQELCLDE 333

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P     Q  ++  ++ ++NQ+  +P  I  + +NL ++ + +N LT+ P ++  
Sbjct: 334 NQLTTLPK-EIEQLQNLRVLDLDNNQLTTLPKEI-GQLQNLQELCLDENQLTTFPKEIRQ 391

Query: 402 WVGLTELNLGTNQIS 416
              L EL+L  N +S
Sbjct: 392 LKNLQELHLYLNPLS 406



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/333 (34%), Positives = 183/333 (54%), Gaps = 3/333 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  + +L +L+EL L  N L +LP ++G + NL  L L    LT
Sbjct: 71  QNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLT 130

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L+ LDL  N L  LP  V +L +L+ L L  NR+ T+  +I  L NL  
Sbjct: 131 TLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQE 190

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  NK+  LP E+ +L+NL  LDL  N L  LPKEIG    L TL+L   +L  +P  
Sbjct: 191 LDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKE 250

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L ++P+ + +  +L    +    +++LP   +  L ++  + L 
Sbjct: 251 IGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKE-IGQLQNLQRLDLH 309

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           +N+ T  P     Q  ++  +  + NQ+  +P  I  + +NL  +++ +N LT+LP ++G
Sbjct: 310 QNQLTTLPK-EIGQLQNLQELCLDENQLTTLPKEI-EQLQNLRVLDLDNNQLTTLPKEIG 367

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
               L EL L  NQ++   ++I+ L NL+ L L
Sbjct: 368 QLQNLQELCLDENQLTTFPKEIRQLKNLQELHL 400



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/222 (39%), Positives = 130/222 (58%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL+ + +T LP  + +L +L+EL L+ N+L +LP +IG + NL  L L    LT
Sbjct: 186 KNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLT 245

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ L+ L+L  N+L  LP  + +L +L+IL LR NRI  +  +I  L NL  
Sbjct: 246 TLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQR 305

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+L+NL  L L  N L  LPKEI     L  LDL +N+L  +P  
Sbjct: 306 LDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKE 365

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           +G L NL  L L  N+L + P+ + +  +L E ++    LSS
Sbjct: 366 IGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 407


>gi|455790003|gb|EMF41899.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 428

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 147/405 (36%), Positives = 222/405 (54%), Gaps = 49/405 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS  + T LP  +EKL +L++LYL+ N+L +LP +IG + NL  L L+ N LT 
Sbjct: 49  NVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTI 108

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L+ L+ LDL  N+L  LP+ + KL +L+ LYL  N++ T              
Sbjct: 109 LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTT-------------- 154

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
                    LP E G+L NL  L+L+ N L  LP+EIG    L TL+L+ N+L  +   +
Sbjct: 155 ---------LPRESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI 205

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L LS N+L ++P  + K  +L+  N+    L+     LL  +  + N+    
Sbjct: 206 EQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAI----LLIEVGKLQNL---- 257

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                            +++N   NQ+  +P  I  + +NL  +N+  N LT+LP+++G 
Sbjct: 258 -----------------HTLNLSDNQLTTLPIEI-GKLQNLHTLNLSGNQLTTLPIEIGK 299

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L +LNL +NQ++ LS++I+ L NL+ L LS N L  LP  IG L+ L+ L+L  N+L
Sbjct: 300 LQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQL 359

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            +LP EIG L+ LQ L L  N+L++ P+ IG L NL  L +G +N
Sbjct: 360 TALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 404



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/365 (39%), Positives = 208/365 (56%), Gaps = 5/365 (1%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N   +RVLDL       LP  + KL +L+ LYL  NR+KT+  +I  L NL  L
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++  N++  LP E+G+L+NL  LDL  N L  LP EIG    L TL L  N+L  +P   
Sbjct: 100 NLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRES 159

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L LS N+L ++P+ + +  +L   N++   L++L   +   L ++  + LS 
Sbjct: 160 GKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI-EQLKNLQTLNLSD 218

Query: 342 NKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           N+ T  P   G  Q  +++++N   NQ+  +   +  + +NL  +N+ DN LT+LP+++G
Sbjct: 219 NQLTTLPIEIGKLQ--NLHTLNLSDNQLAILLIEV-GKLQNLHTLNLSDNQLTTLPIEIG 275

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  LNL  NQ++ L  +I  L NL+ L L +N L  L   I  L+ L+ L L  N+
Sbjct: 276 KLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNR 335

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L  LP EIG L+ LQ L L +NQL +LP  IG L NL  LS+ +N L + P+EIG L+NL
Sbjct: 336 LVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNL 395

Query: 521 HTLYL 525
            TLYL
Sbjct: 396 QTLYL 400



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/368 (37%), Positives = 196/368 (53%), Gaps = 27/368 (7%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           ++++L L      T+   I+ L NL  L + DN+++ LP E+G+LKNL  L+L+ N L  
Sbjct: 49  NVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTI 108

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LPKEIG    L  LDL  N L  +P  +G L NL  L LS N+L ++P    K  +L E 
Sbjct: 109 LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQEL 168

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           N+    L++LP  +                          Q  ++ ++N + NQ+  + +
Sbjct: 169 NLSDNQLTTLPQEI-------------------------GQLQNLQTLNLKSNQLTTL-F 202

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
               + KNL  +N+ DN LT+LP+++G    L  LNL  NQ++ L  ++  L NL  L L
Sbjct: 203 KEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNL 262

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           S+N L  LP  IG L+ L  L+L  N+L +LP EIG L+ LQ L L SNQL +L + I  
Sbjct: 263 SDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQ 322

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L NL  LS+  N L  +P+EIG L+NL  L L +N  L  +P E+    NLQ +SL    
Sbjct: 323 LKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQ-LTALPIEIGQLQNLQTLSLYKNR 381

Query: 554 LSQIPSEI 561
           L   P EI
Sbjct: 382 LMTFPKEI 389



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 110/317 (34%), Positives = 179/317 (56%), Gaps = 4/317 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS + +T LP  + KL +L+ L LY N+L  LP +IG + NL  L L+ N LT
Sbjct: 94  KNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLT 153

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP     L  L+ L+L  N+L  LP  + +L +L+ L L+ N++ T+  +I+ L NL  
Sbjct: 154 TLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQT 213

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++ DN++  LP E+G+L+NL TL+L+ N L  L  E+G    L TL+L  N+L  +P  
Sbjct: 214 LNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIE 273

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LS N+L ++P  + K  +L + N+    L++L    +  L ++  ++LS
Sbjct: 274 IGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKE-IEQLKNLQTLSLS 332

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P     Q  ++  +N  +NQ+  +P  I  + +NL  +++  N L + P ++G
Sbjct: 333 YNRLVILPK-EIGQLQNLQELNLWNNQLTALPIEI-GQLQNLQTLSLYKNRLMTFPKEIG 390

Query: 401 TWVGLTELNLGT-NQIS 416
               L  L LG  NQ S
Sbjct: 391 QLKNLQTLYLGGHNQFS 407



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/272 (35%), Positives = 150/272 (55%), Gaps = 14/272 (5%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L LS + +T LP    KL +L+EL L  N+L +LP +IG + NL  L L  N 
Sbjct: 138 KLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 197

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+L   +  L+ L+ L+L  N+L  LP+ + KL +L  L L  N++  +  ++  L NL
Sbjct: 198 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNL 257

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++ DN++  LP E+G+L+NL TL+L+ N L  LP EIG    L  L+L  N+L  + 
Sbjct: 258 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLS 317

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +  L NL  L LSYNRL  +P+ + +  +L E N+    L++LP   +  L ++  ++
Sbjct: 318 KEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE-IGQLQNLQTLS 376

Query: 339 LSRNKFTAYPS-------------GGPTQFTS 357
           L +N+   +P              GG  QF+S
Sbjct: 377 LYKNRLMTFPKEIGQLKNLQTLYLGGHNQFSS 408



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/311 (35%), Positives = 165/311 (53%), Gaps = 8/311 (2%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  LDL       +P  +  L NL +L L  NRL+++P+ + +  +L E
Sbjct: 39  DLTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQE 98

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP--SGGPTQFTSVYSINFEHNQIDK 370
            N+    L+ LP   +  L ++  + L  N+ T  P   G      ++Y      NQ+  
Sbjct: 99  LNLSSNQLTILPKE-IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLY---LSSNQLTT 154

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           +P     +  NL ++N+ DN LT+LP ++G    L  LNL +NQ++ L ++I+ L NL+ 
Sbjct: 155 LPRE-SGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQT 213

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA 490
           L LS+N L  LP  IG L+ L  L+L +N+L  L  E+G L+ L  L L  NQL +LP  
Sbjct: 214 LNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIE 273

Query: 491 IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLD 550
           IG L NL  L++  N L ++P EIG L+NL  L L+ N  L  +  E+    NLQ +SL 
Sbjct: 274 IGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQ-LTTLSKEIEQLKNLQTLSLS 332

Query: 551 NCPLSQIPSEI 561
              L  +P EI
Sbjct: 333 YNRLVILPKEI 343



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
           + L +A+ +  N+  L +   N  ++P++I  L+NL  LYL DN  L  +P E+    NL
Sbjct: 38  MDLTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNR-LKTLPKEIGQLKNL 96

Query: 545 QIMSLDNCPLSQIPSEI 561
           Q ++L +  L+ +P EI
Sbjct: 97  QELNLSSNQLTILPKEI 113


>gi|421090489|ref|ZP_15551281.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000703|gb|EKO51331.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 448

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 149/402 (37%), Positives = 222/402 (55%), Gaps = 30/402 (7%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L G+KLA+L  +IG + NL  L L  N LT+LP+ +  LQ L+VLDL  N+L  LP  
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + KL +L++L L FNR+  +  ++  L NL +L++  NK+  LP ++G+L+NL  L+L  
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDL 172

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L  LP++IG    L  L+ Q N+L   P  +G L  L  L L +NRL ++ E + +  
Sbjct: 173 NKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQ 232

Query: 309 HLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
           +L   ++    L++LP   G L  L  +N                      +Y I     
Sbjct: 233 NLQILDLISNPLTTLPKEIGQLQKLQELN----------------------LYGI----- 265

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
           Q+  +P GI  + +NL  +N+    LT LP ++G    L +L L  NQ++ L E+I  L 
Sbjct: 266 QLKTLPQGII-QLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLK 324

Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
            L+ L L NN L+ LP  I  L+KL+ L LE N++ + P EIG L+ LQ L L  NQL +
Sbjct: 325 KLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTT 384

Query: 487 LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           LP+ IG L NL  L++  N L ++P+E+G L+ L  L L +N
Sbjct: 385 LPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNN 426



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 140/404 (34%), Positives = 215/404 (53%), Gaps = 26/404 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS S +  L   + KL +L++LYL  N+L +LP++IG + NL  L L  N LT LP  
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+VL+L  N+L  LP  V +L +L++L L  N++  +   I  L NL +L++  
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDL 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+  LP ++G+L+NL  L+   N L   PKEIG    L  L+L  N L  + + +  L 
Sbjct: 173 NKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N L ++P+ + +   L E N+ G  L +LP G++                 
Sbjct: 233 NLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGII----------------- 275

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                   Q  ++  +N  +  +  +P  I   +K L K+ +  N LT+LP ++G    L
Sbjct: 276 --------QLQNLRGLNLNYTHLTILPKEIGQLSK-LQKLYLYGNQLTTLPEEIGQLKKL 326

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            EL LG N +  L ++I+ L  L+ L L  N +   P  IG L+ L+ L+L  N+L +LP
Sbjct: 327 QELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLP 386

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            EIG L+ LQ L L+ NQL +LP+ +G L  L  L++  N + S
Sbjct: 387 QEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIAS 430



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 125/358 (34%), Positives = 185/358 (51%), Gaps = 31/358 (8%)

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           R L   L   K+   L+L+ + L  L KEIG    L  L L +N+L  +P+ +G L NL 
Sbjct: 38  RNLTEALQNPKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQ 97

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTA 346
            L L  N L  +P+ + K  +L   N+    L+ LPD  G L +L  +N   L  NK T 
Sbjct: 98  VLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLN---LDLNKLTI 154

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P     Q  ++  +N + N++  +P  I  + +NL  +N + N LT+ P ++G    L 
Sbjct: 155 LPE-KIGQLQNLQVLNLDLNKLTILPEKI-GQLQNLQILNSQGNQLTTFPKEIGQLQKLQ 212

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
           ELNLG N+++ L E++  L NL++L L +N L  LP  IG L+KL+ L+L   +L++LP 
Sbjct: 213 ELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQ 272

Query: 467 -----------------------EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
                                  EIG L +LQ+L L  NQL +LP  IG L  L  L +G
Sbjct: 273 GIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLG 332

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N L+++P+EI  L+ L TLYL  N  +   P E+    NLQ ++L    L+ +P EI
Sbjct: 333 NNPLRTLPKEIEQLQKLQTLYLEGNQ-ITTFPKEIGQLQNLQELNLGFNQLTTLPQEI 389



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/198 (38%), Positives = 113/198 (57%), Gaps = 2/198 (1%)

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN 424
           +NQ+  +P  I  + +NL  +++  N LT LP ++G    L  LNLG N+++ L +++  
Sbjct: 80  YNQLTTLPNEI-GQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQ 138

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           L NL+VL L  N L  LP  IG L+ L+ L+L+ NKL  LP +IG L+ LQ L  Q NQL
Sbjct: 139 LQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQL 198

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
            + P+ IG L  L  L++G N L ++ EE+  L+NL  L L  N  L  +P E+     L
Sbjct: 199 TTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNP-LTTLPKEIGQLQKL 257

Query: 545 QIMSLDNCPLSQIPSEIV 562
           Q ++L    L  +P  I+
Sbjct: 258 QELNLYGIQLKTLPQGII 275


>gi|421119254|ref|ZP_15579578.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347884|gb|EKO98735.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 428

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 146/405 (36%), Positives = 223/405 (55%), Gaps = 49/405 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS  + T LP  +E+L +L++LYL+ N+L +LP +IG + NL  L L+ N LT 
Sbjct: 49  NVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTI 108

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L+ L+ LDL  N+L  LP+ + KL +L+ LYL  N++ T              
Sbjct: 109 LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTT-------------- 154

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
                    LP E G+L+NL  L+L+ N L  LP+EIG    L TL+L+ N+L  +   +
Sbjct: 155 ---------LPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI 205

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L LS N+L ++P  + K  +L+  N+    L+     LL  +  + N+    
Sbjct: 206 EQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAI----LLIEVGKLQNL---- 257

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                            +++N   NQ+  +P  I  + +NL  +N+  N LT+LP+++G 
Sbjct: 258 -----------------HTLNLSDNQLTTLPIEI-GKLQNLHTLNLSGNQLTTLPIEIGK 299

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L +LNL +NQ++ LS++I+ L NL+ L LS N L  LP  IG L+ L+ L+L  N+L
Sbjct: 300 LQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQL 359

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            +LP EIG L+ LQ L L  N+L++ P+ IG L NL  L +G +N
Sbjct: 360 TALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 404



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 142/365 (38%), Positives = 208/365 (56%), Gaps = 5/365 (1%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N   +RVLDL       LP  + +L +L+ LYL  NR+KT+  +I  L NL  L
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++  N++  LP E+G+L+NL  LDL  N L  LP EIG    L TL L  N+L  +P   
Sbjct: 100 NLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRES 159

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L LS N+L ++P+ + +  +L   N++   L++L   +   L ++  + LS 
Sbjct: 160 GKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI-EQLKNLQTLNLSD 218

Query: 342 NKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           N+ T  P   G  Q  +++++N   NQ+  +   +  + +NL  +N+ DN LT+LP+++G
Sbjct: 219 NQLTTLPIEIGKLQ--NLHTLNLSDNQLAILLIEV-GKLQNLHTLNLSDNQLTTLPIEIG 275

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  LNL  NQ++ L  +I  L NL+ L L +N L  L   I  L+ L+ L L  N+
Sbjct: 276 KLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNR 335

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L  LP EIG L+ LQ L L +NQL +LP  IG L NL  LS+ +N L + P+EIG L+NL
Sbjct: 336 LVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNL 395

Query: 521 HTLYL 525
            TLYL
Sbjct: 396 QTLYL 400



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 137/368 (37%), Positives = 197/368 (53%), Gaps = 27/368 (7%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           ++++L L      T+  +I+ L NL  L + DN+++ LP E+G+LKNL  L+L+ N L  
Sbjct: 49  NVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTI 108

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LPKEIG    L  LDL  N L  +P  +G L NL  L LS N+L ++P    K  +L E 
Sbjct: 109 LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQEL 168

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           N+    L++LP  +                          Q  ++ ++N + NQ+  + +
Sbjct: 169 NLSDNQLTTLPQEI-------------------------GQLQNLQTLNLKSNQLTTL-F 202

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
               + KNL  +N+ DN LT+LP+++G    L  LNL  NQ++ L  ++  L NL  L L
Sbjct: 203 KEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNL 262

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           S+N L  LP  IG L+ L  L+L  N+L +LP EIG L+ LQ L L SNQL +L + I  
Sbjct: 263 SDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQ 322

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L NL  LS+  N L  +P+EIG L+NL  L L +N  L  +P E+    NLQ +SL    
Sbjct: 323 LKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQ-LTALPIEIGQLQNLQTLSLYKNR 381

Query: 554 LSQIPSEI 561
           L   P EI
Sbjct: 382 LMTFPKEI 389



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/317 (34%), Positives = 180/317 (56%), Gaps = 4/317 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS + +T LP  + KL +L+ L LY N+L  LP +IG + NL  L L+ N LT
Sbjct: 94  KNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLT 153

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP     L+ L+ L+L  N+L  LP  + +L +L+ L L+ N++ T+  +I+ L NL  
Sbjct: 154 TLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQT 213

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++ DN++  LP E+G+L+NL TL+L+ N L  L  E+G    L TL+L  N+L  +P  
Sbjct: 214 LNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIE 273

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LS N+L ++P  + K  +L + N+    L++L    +  L ++  ++LS
Sbjct: 274 IGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKE-IEQLKNLQTLSLS 332

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P     Q  ++  +N  +NQ+  +P  I  + +NL  +++  N L + P ++G
Sbjct: 333 YNRLVILPK-EIGQLQNLQELNLWNNQLTALPIEI-GQLQNLQTLSLYKNRLMTFPKEIG 390

Query: 401 TWVGLTELNLGT-NQIS 416
               L  L LG  NQ S
Sbjct: 391 QLKNLQTLYLGGHNQFS 407



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/272 (35%), Positives = 150/272 (55%), Gaps = 14/272 (5%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L LS + +T LP    KL +L+EL L  N+L +LP +IG + NL  L L  N 
Sbjct: 138 KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 197

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+L   +  L+ L+ L+L  N+L  LP+ + KL +L  L L  N++  +  ++  L NL
Sbjct: 198 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNL 257

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++ DN++  LP E+G+L+NL TL+L+ N L  LP EIG    L  L+L  N+L  + 
Sbjct: 258 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLS 317

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +  L NL  L LSYNRL  +P+ + +  +L E N+    L++LP   +  L ++  ++
Sbjct: 318 KEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE-IGQLQNLQTLS 376

Query: 339 LSRNKFTAYPS-------------GGPTQFTS 357
           L +N+   +P              GG  QF+S
Sbjct: 377 LYKNRLMTFPKEIGQLKNLQTLYLGGHNQFSS 408



 Score = 42.0 bits (97), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
           + L +A+ +  N+  L +   N  ++P+EI  L+NL  LYL DN  L  +P E+    NL
Sbjct: 38  MDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNR-LKTLPKEIGQLKNL 96

Query: 545 QIMSLDNCPLSQIPSEI 561
           Q ++L +  L+ +P EI
Sbjct: 97  QELNLSSNQLTILPKEI 113


>gi|24215147|ref|NP_712628.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074466|ref|YP_005988783.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196215|gb|AAN49646.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458255|gb|AER02800.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 498

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 159/450 (35%), Positives = 226/450 (50%), Gaps = 34/450 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  + +L +L+EL L  N L  LP +IG + NL  L L +N L + P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L  LDL  N+L  LP  + +L +L+ L L  N++ T   +I  L NL  L + +
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL TLDL  N    LPKEIG    L TL+L  N+L  +P  +G L 
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  NRL   P+ + +  +L         L++LP   +  L ++  + L  N+ T
Sbjct: 233 NLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKE-MGQLQNLQTLNLVNNRLT 291

Query: 346 AYPSGGPTQFTSVYSINF--------EHNQIDKI------------PYGIFSRAKNLSK- 384
            +P     Q  ++  +          E  +I K+              G++ R  NL++ 
Sbjct: 292 VFPK-EIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVY-RNLNLAQE 349

Query: 385 ---------VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
                    +  KD    S P  +  +  L  LNL     S L ++I  L NL+ L L  
Sbjct: 350 EPLKVFELSLEYKD-FSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGL 408

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N LK +PS IG L+ L+ L+LE N+LE LP EIG L+ LQ+L L  N L   P  I  L 
Sbjct: 409 NGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLK 468

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            L  L +  N   + P+EIG LENL TL L
Sbjct: 469 KLQKLDLSVNQFTTFPKEIGKLENLQTLNL 498



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 136/430 (31%), Positives = 211/430 (49%), Gaps = 33/430 (7%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L  +L N   +RVL+L   KL  LP  + +L +L+ L L++N +  +  +I  L NL  
Sbjct: 39  DLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQE 98

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +RDN++   P  + EL+ L +LDL+ N L  LP EIG    L  L L  N+L   P  
Sbjct: 99  LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 158

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL +L LS NRL ++P+ + +  +L   +++    + LP   +  L ++  + LS
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKE-IGQLQNLQTLNLS 217

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P     Q  ++  +   +N++   P  I  + +NL  +   +N LT+LP ++G
Sbjct: 218 DNQLATLPV-EIGQLQNLQELYLRNNRLTVFPKEI-GQLQNLQMLCSPENRLTALPKEMG 275

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL---------KKLPSSIGNLRK- 450
               L  LNL  N+++   ++I  L NL+ L L  N L         K  P S  +LR+ 
Sbjct: 276 QLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREV 335

Query: 451 ----------------LKCLDLE---ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
                           LK  +L    ++  +S P  I   + L+ L L      +LP+ I
Sbjct: 336 AENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEI 395

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
             L NL YL++G N L++IP EIG L+NL  L L  N  L  +P E+    NLQ +SL  
Sbjct: 396 SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE-LERLPKEIGQLRNLQKLSLHQ 454

Query: 552 CPLSQIPSEI 561
             L   P+EI
Sbjct: 455 NTLKIFPAEI 464



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 124/290 (42%), Gaps = 75/290 (25%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLA----------------------- 137
           +N+  L+LS + +  LP  + +L +L+ELYL  N+L                        
Sbjct: 209 QNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLT 268

Query: 138 SLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLN-------------- 183
           +LP ++G + NL  L L  N LT  P  +  LQ L+ L+L  N L+              
Sbjct: 269 ALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDS 328

Query: 184 --------------------ELPMVVYKLT--------SLKILYLRFNRIK--------- 206
                               E P+ V++L+        S   + L+F  ++         
Sbjct: 329 NLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGF 388

Query: 207 -TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
            T+  +I  L NL  L++  N ++ +P E+G+LKNL  L+L  N LE LPKEIG    L 
Sbjct: 389 STLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQ 448

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
            L L  N L   P  +  L  L +L LS N+  + P+ + K  +L   N+
Sbjct: 449 KLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNL 498



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 63/125 (50%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  N+  L+L     + LP  + +L +L+ L L  N L ++PS+IG + NL  L L  N 
Sbjct: 374 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 433

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP  +  L+ L+ L L  N L   P  + +L  L+ L L  N+  T   +I  L NL
Sbjct: 434 LERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENL 493

Query: 219 SMLSM 223
             L++
Sbjct: 494 QTLNL 498


>gi|428175990|gb|EKX44877.1| hypothetical protein GUITHDRAFT_87300 [Guillardia theta CCMP2712]
          Length = 618

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 154/469 (32%), Positives = 253/469 (53%), Gaps = 26/469 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS++ ++  P  + KLT LEEL L  NK++ LP++IG    L    ++ N+L SLP S
Sbjct: 92  LNLSRNQLSDCPVHLCKLTLLEELILDHNKISVLPNKIGNCGALRHFSISHNALRSLPAS 151

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + + ++L   DL HN L  LP  V  L  L  L L  N + T+  ++    NLS + +  
Sbjct: 152 IKDFKRLLNFDLSHNHLTILPAEVGMLPLLDALLLPDNMLTTIVKELGGCVNLSHIDLIG 211

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP ELG+L++L  +DL  N + ++P  IG    L    +Q+N L +IP+ +G L 
Sbjct: 212 NQVTYLPAELGKLRSLARVDLDSNQIGKIPNTIGRLQSLEIFLMQNNALDSIPESIGQLK 271

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L  L LS N ++ +P ++     L E N+   ++S+LP  ++  LT +     S N   
Sbjct: 272 SLQELDLSDNNIQLLPLSIGSISDLTELNLSANSISALPREIV-VLTRLVTFRYSSNNLL 330

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIP-----------------YGIF----SRAKNLSK 384
             PS    + T++ S++ + N+++ +P                 + IF     R  NL  
Sbjct: 331 TLPS-IVCKLTTLTSLDLQENKLNSLPSNFSELPLMSINLSRNNFEIFPPPLERMTNLEH 389

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL--VNLEVLVLSNNLLKKLP 442
           +++ DN LT LP  +G +V  T + LG NQ+S L + +  +   +L+V+ LS N L  LP
Sbjct: 390 IDLTDNRLTRLPFMIGRFVYATAILLGGNQVSVLPDSLGAMGEASLQVINLSKNGLFDLP 449

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
           S++ N+++L+ + L  N L  LPN++  LK+L+ L L  NQL  LP  +G L +LS L +
Sbjct: 450 SALFNIKRLERICLSGNNLRELPNQLCVLKKLKELWLDHNQLTYLPSRLGELVSLSALYL 509

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
             N L+ IP+ +  L+ L  L L+ N  L  +P++    S L+ + LD+
Sbjct: 510 HSNRLKMIPKNLVELKGLKVLTLSGNE-LRELPWDFHRLSELEELWLDD 557



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 209/455 (45%), Gaps = 55/455 (12%)

Query: 134 NKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLT 193
           N ++++ S+IG   N   L   +N L S+   L NL +L  LDL  N    +P ++  LT
Sbjct: 28  NHISTISSEIGLFENAQTLCFNDNKLESIACELRNLTRLVRLDLEGNLFETMPNILTSLT 87

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           SL +L                  NLS      N++ + P  L +L  L  L L HN +  
Sbjct: 88  SLTVL------------------NLSR-----NQLSDCPVHLCKLTLLEELILDHNKISV 124

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP------------ 301
           LP +IGNC  L    + HN L ++P  + +   L    LS+N L  +P            
Sbjct: 125 LPNKIGNCGALRHFSISHNALRSLPASIKDFKRLLNFDLSHNHLTILPAEVGMLPLLDAL 184

Query: 302 -----------ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
                      + L  CV+L+  ++ G  ++ LP   L  L S+  + L  N+    P+ 
Sbjct: 185 LLPDNMLTTIVKELGGCVNLSHIDLIGNQVTYLP-AELGKLRSLARVDLDSNQIGKIPNT 243

Query: 351 -GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
            G  Q   ++ +  ++N +D IP  I  + K+L ++++ DN +  LPL +G+   LTELN
Sbjct: 244 IGRLQSLEIFLM--QNNALDSIPESI-GQLKSLQELDLSDNNIQLLPLSIGSISDLTELN 300

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           L  N IS L  +I  L  L     S+N L  LPS +  L  L  LDL+ENKL SLP+   
Sbjct: 301 LSANSISALPREIVVLTRLVTFRYSSNNLLTLPSIVCKLTTLTSLDLQENKLNSLPSNFS 360

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            L  L  + L  N     P  +  +TNL ++ + +N L  +P  IG       + L  N 
Sbjct: 361 ELP-LMSINLSRNNFEIFPPPLERMTNLEHIDLTDNRLTRLPFMIGRFVYATAILLGGNQ 419

Query: 530 CLNNIPFELALC--SNLQIMSLDNCPLSQIPSEIV 562
            ++ +P  L     ++LQ+++L    L  +PS + 
Sbjct: 420 -VSVLPDSLGAMGEASLQVINLSKNGLFDLPSALF 453



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 186/388 (47%), Gaps = 29/388 (7%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  ++  +DL  + I  +P ++ +L  LE   +  N L S+P  IG + +L  L L++N+
Sbjct: 223 KLRSLARVDLDSNQIGKIPNTIGRLQSLEIFLMQNNALDSIPESIGQLKSLQELDLSDNN 282

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           +  LP S+ ++  L  L+L  N ++ LP  +  LT L       N + T+   +  L+ L
Sbjct: 283 IQLLPLSIGSISDLTELNLSANSISALPREIVVLTRLVTFRYSSNNLLTLPSIVCKLTTL 342

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
           + L +++NK+  LP    EL  L++++L+ N+ E  P  +   T L  +DL  N L  +P
Sbjct: 343 TSLDLQENKLNSLPSNFSELP-LMSINLSRNNFEIFPPPLERMTNLEHIDLTDNRLTRLP 401

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKC--VHLNEFNVEGCALSSLPDGLLSSLTSINN 336
            M+G  +  T + L  N++  +P++L       L   N+    L  LP  L  ++  +  
Sbjct: 402 FMIGRFVYATAILLGGNQVSVLPDSLGAMGEASLQVINLSKNGLFDLPSALF-NIKRLER 460

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           I LS N     P                 NQ+  +        K L ++ +  N LT LP
Sbjct: 461 ICLSGNNLRELP-----------------NQLCVL--------KKLKELWLDHNQLTYLP 495

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             LG  V L+ L L +N++  + +++  L  L+VL LS N L++LP     L +L+ L L
Sbjct: 496 SRLGELVSLSALYLHSNRLKMIPKNLVELKGLKVLTLSGNELRELPWDFHRLSELEELWL 555

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQL 484
           ++N+ E+L  E      LQ L  + N L
Sbjct: 556 DDNQFEALQLERSLFPRLQFLTFRHNPL 583



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 170/352 (48%), Gaps = 50/352 (14%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           +S   N I  +  E+G  +N  TL    N LE +  E+ N T LV LDL+ N    +P++
Sbjct: 23  VSFAHNHISTISSEIGLFENAQTLCFNDNKLESIACELRNLTRLVRLDLEGNLFETMPNI 82

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           L +L +LT L LS N+L   P  L K   L E  ++   +S LP+ +  +  ++ + ++S
Sbjct: 83  LTSLTSLTVLNLSRNQLSDCPVHLCKLTLLEELILDHNKISVLPNKI-GNCGALRHFSIS 141

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N   + P+     F  + + +  HN +  +P  +      L  + + DN+LT++  +LG
Sbjct: 142 HNALRSLPAS-IKDFKRLLNFDLSHNHLTILPAEV-GMLPLLDALLLPDNMLTTIVKELG 199

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
             V L+ ++L  NQ++ L                       P+ +G LR L  +DL+ N+
Sbjct: 200 GCVNLSHIDLIGNQVTYL-----------------------PAELGKLRSLARVDLDSNQ 236

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           +  +PN IG L+ L+  ++Q+N L S+P +IG L +L  L + +NN+Q +P  IG++ +L
Sbjct: 237 IGKIPNTIGRLQSLEIFLMQNNALDSIPESIGQLKSLQELDLSDNNIQLLPLSIGSISDL 296

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRY 572
             L L+ N+                        +S +P EIVV    +  RY
Sbjct: 297 TELNLSANS------------------------ISALPREIVVLTRLVTFRY 324



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 24/227 (10%)

Query: 98  CKEENILNLD----------------------LSKSSITHLPPSVEKLTHLEELYLYGNK 135
           CK   + +LD                      LS+++    PP +E++T+LE + L  N+
Sbjct: 337 CKLTTLTSLDLQENKLNSLPSNFSELPLMSINLSRNNFEIFPPPLERMTNLEHIDLTDNR 396

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQ--LRVLDLRHNKLNELPMVVYKLT 193
           L  LP  IG     T + L  N ++ LPDSL  + +  L+V++L  N L +LP  ++ + 
Sbjct: 397 LTRLPFMIGRFVYATAILLGGNQVSVLPDSLGAMGEASLQVINLSKNGLFDLPSALFNIK 456

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
            L+ + L  N ++ +   +  L  L  L +  N++  LP  LGEL +L  L L  N L+ 
Sbjct: 457 RLERICLSGNNLRELPNQLCVLKKLKELWLDHNQLTYLPSRLGELVSLSALYLHSNRLKM 516

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESV 300
           +PK +     L  L L  NEL  +P     L  L  L L  N+ E++
Sbjct: 517 IPKNLVELKGLKVLTLSGNELRELPWDFHRLSELEELWLDDNQFEAL 563



 Score = 45.1 bits (105), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 28/157 (17%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C  + +  L L  + +T+LP  + +L  L  LYL+ N+L  +P                 
Sbjct: 476 CVLKKLKELWLDHNQLTYLPSRLGELVSLSALYLHSNRLKMIPK---------------- 519

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
                  +L  L+ L+VL L  N+L ELP   ++L+ L+ L+L  N+ + +  +      
Sbjct: 520 -------NLVELKGLKVLTLSGNELRELPWDFHRLSELEELWLDDNQFEALQLERSLFPR 572

Query: 218 LSMLSMRDNKI-RELPPELGELKNLVTLDLAHNHLEE 253
           L  L+ R N + +E+   L E  N   LD   NH EE
Sbjct: 573 LQFLTFRHNPLTKEVFKRLKE--NFEGLD--KNHDEE 605


>gi|418728092|ref|ZP_13286672.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777137|gb|EKR57105.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 423

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 134/356 (37%), Positives = 205/356 (57%), Gaps = 3/356 (0%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L   KL +LP +I  + NL  L L  N LT+LP  +  L+ L++L L +N+L  LP  
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +LK+L+L  N++ T+  +I+ L NL ML + +N++  LP E+G+L+NL  L L++
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSY 170

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L  LPKEIG    L  L L  ++L  +P  +G L NL  L LS+N+L  +P+ + +  
Sbjct: 171 NQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQ 230

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L  F ++   L+ LP  +   L +++ + L  N+ T  P     Q  ++     ++NQ 
Sbjct: 231 NLQRFVLDNNQLTILPKEI-GKLQNLHELYLGHNQLTILPKE-IGQLQNLQRFVLDNNQF 288

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
             +P  I  + +NL ++ +  N LT+ P ++G    L  LNL  NQ++ L E+I+ L NL
Sbjct: 289 TILPKEI-GQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNL 347

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           + L LS N LK +P  IG L+ LK LDL  N+L  LP EIG LK LQ L L +NQ 
Sbjct: 348 KTLNLSENQLKTIPQEIGQLQNLKSLDLRNNQLTILPKEIGQLKNLQELYLNNNQF 403



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 137/378 (36%), Positives = 204/378 (53%), Gaps = 26/378 (6%)

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L+E  LT+LP  +  LQ L++LDL HN+L  LP  + +L +L++L L +N++  +  
Sbjct: 50  VLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPK 109

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           +I  L NL +L + +N++  LP E+ +LKNL  LDL +N L  LPKEIG    L  L L 
Sbjct: 110 EIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLS 169

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           +N+L  +P  +G L NL  L L  ++L  +P+ + K  +L+E ++    L+ LP  +   
Sbjct: 170 YNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEI-GQ 228

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           L ++    L  N+ T  P                             + +NL ++ +  N
Sbjct: 229 LQNLQRFVLDNNQLTILPKE-------------------------IGKLQNLHELYLGHN 263

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            LT LP ++G    L    L  NQ + L ++I  L NL+ L LS N L   P  IG L+K
Sbjct: 264 QLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQK 323

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L+ L+L  N+L +LP EI  LK L+ L L  NQL ++P+ IG L NL  L +  N L  +
Sbjct: 324 LQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLRNNQLTIL 383

Query: 511 PEEIGTLENLHTLYLNDN 528
           P+EIG L+NL  LYLN+N
Sbjct: 384 PKEIGQLKNLQELYLNNN 401



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 147/413 (35%), Positives = 222/413 (53%), Gaps = 29/413 (7%)

Query: 145 YVTNLTCLGLAE--NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           +  +L+C   AE   +   L  +L N   +RVL L   KL  LP  + +L +LK+L L  
Sbjct: 19  FFIHLSCEIQAEEPGTYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGH 78

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N++  +  +I  L NL +L +  N++  LP E+G+LKNL  L L +N L  LP EI    
Sbjct: 79  NQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLK 138

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  LDL +N+L  +P  +G L NL  L LSYN+L ++P+ + K  +L   ++    L+ 
Sbjct: 139 NLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTI 198

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LP  +                          +  +++ ++  HNQ+  +P  I  + +NL
Sbjct: 199 LPQEI-------------------------GKLQNLHELDLSHNQLTILPKEI-GQLQNL 232

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
            +  + +N LT LP ++G    L EL LG NQ++ L ++I  L NL+  VL NN    LP
Sbjct: 233 QRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILP 292

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
             IG L+ L+ L L  N+L + P EIG L++LQ L L +NQL +LP  I  L NL  L++
Sbjct: 293 KEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNL 352

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            EN L++IP+EIG L+NL +L L +N  L  +P E+    NLQ + L+N   S
Sbjct: 353 SENQLKTIPQEIGQLQNLKSLDLRNNQ-LTILPKEIGQLKNLQELYLNNNQFS 404



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/337 (35%), Positives = 200/337 (59%), Gaps = 5/337 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  + +L +L+ L LY N+L +LP +IG + NL  L L  N LT
Sbjct: 69  QNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLT 128

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L++LDL +N+L  LP  + +L +L+ LYL +N++ T+  +I  L NL +
Sbjct: 129 TLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQL 188

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+ ++++  LP E+G+L+NL  LDL+HN L  LPKEIG    L    L +N+L  +P  
Sbjct: 189 LSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKE 248

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L +N+L  +P+ + +  +L  F ++    + LP   +  L ++  + LS
Sbjct: 249 IGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKE-IGQLQNLQELYLS 307

Query: 341 RNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
            N+ T +P   G  Q   + ++N  +NQ+  +P  I  + KNL  +N+ +N L ++P ++
Sbjct: 308 YNQLTTFPKEIGKLQ--KLQTLNLWNNQLTTLPEEI-EQLKNLKTLNLSENQLKTIPQEI 364

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
           G    L  L+L  NQ++ L ++I  L NL+ L L+NN
Sbjct: 365 GQLQNLKSLDLRNNQLTILPKEIGQLKNLQELYLNNN 401



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 121/345 (35%), Positives = 189/345 (54%), Gaps = 4/345 (1%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L + + K+  LP E+ +L+NL  LDL HN L  LPKEIG    L  L L +N+L  
Sbjct: 47  DVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTA 106

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L NL  L L+ N+L ++P  + +  +L   ++    L+ LP  +   L ++  
Sbjct: 107 LPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEI-GQLQNLQE 165

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + LS N+ T  P     +  ++  ++   +Q+  +P  I  + +NL ++++  N LT LP
Sbjct: 166 LYLSYNQLTTLPKE-IGKLENLQLLSLYESQLTILPQEI-GKLQNLHELDLSHNQLTILP 223

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L    L  NQ++ L ++I  L NL  L L +N L  LP  IG L+ L+   L
Sbjct: 224 KEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVL 283

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
           + N+   LP EIG L+ LQ L L  NQL + P+ IG L  L  L++  N L ++PEEI  
Sbjct: 284 DNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQ 343

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+NL TL L++N  L  IP E+    NL+ + L N  L+ +P EI
Sbjct: 344 LKNLKTLNLSENQ-LKTIPQEIGQLQNLKSLDLRNNQLTILPKEI 387



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/281 (35%), Positives = 153/281 (54%), Gaps = 4/281 (1%)

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           L N +++  L LS  +L ++P+ + +  +L   ++    L++LP  +   L ++  + L 
Sbjct: 42  LQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEI-GQLKNLQLLILY 100

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ TA P     Q  ++  +   +NQ+  +P  I  + KNL  +++ +N LT LP ++G
Sbjct: 101 YNQLTALPKE-IGQLKNLKVLFLNNNQLTTLPTEI-RQLKNLQMLDLGNNQLTILPKEIG 158

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L EL L  NQ++ L ++I  L NL++L L  + L  LP  IG L+ L  LDL  N+
Sbjct: 159 QLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQ 218

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L  LP EIG L+ LQR +L +NQL  LP+ IG L NL  L +G N L  +P+EIG L+NL
Sbjct: 219 LTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNL 278

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
               L DN     +P E+    NLQ + L    L+  P EI
Sbjct: 279 QRFVL-DNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEI 318



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/214 (37%), Positives = 125/214 (58%), Gaps = 5/214 (2%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  LDLS + +T LP  + +L +L+   L  N+L  LP +IG + NL  L L  N 
Sbjct: 205 KLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQ 264

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT LP  +  LQ L+   L +N+   LP  + +L +L+ LYL +N++ T   +I  L  L
Sbjct: 265 LTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKL 324

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++ +N++  LP E+ +LKNL TL+L+ N L+ +P+EIG    L +LDL++N+L  +P
Sbjct: 325 QTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLRNNQLTILP 384

Query: 279 DMLGNLINLTRLRLSYNRL-----ESVPETLSKC 307
             +G L NL  L L+ N+      E + + L KC
Sbjct: 385 KEIGQLKNLQELYLNNNQFSIEEKERIRKLLPKC 418



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/247 (34%), Positives = 127/247 (51%), Gaps = 24/247 (9%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  L L +S +T LP  + KL +L EL L  N+L  LP +IG + NL    L  N 
Sbjct: 182 KLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQ 241

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT LP  +  LQ L  L L HN+L  LP                        +I  L NL
Sbjct: 242 LTILPKEIGKLQNLHELYLGHNQLTILP-----------------------KEIGQLQNL 278

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
               + +N+   LP E+G+L+NL  L L++N L   PKEIG    L TL+L +N+L  +P
Sbjct: 279 QRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLP 338

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           + +  L NL  L LS N+L+++P+ + +  +L   ++    L+ LP   +  L ++  + 
Sbjct: 339 EEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLRNNQLTILPKE-IGQLKNLQELY 397

Query: 339 LSRNKFT 345
           L+ N+F+
Sbjct: 398 LNNNQFS 404


>gi|359728059|ref|ZP_09266755.1| hypothetical protein Lwei2_14517 [Leptospira weilii str.
           2006001855]
          Length = 576

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 154/481 (32%), Positives = 246/481 (51%), Gaps = 56/481 (11%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL-- 159
           N+  L+L+ + ++ +P  +++L  L+ L LYGN+L +LP +IG + NL+ L L++N L  
Sbjct: 73  NLQELNLAFNELSTIPEEIKRLQKLQSLDLYGNRLEALPPEIGQLQNLSWLSLSKNQLAT 132

Query: 160 ---------------------TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL 198
                                T LP  +  L  L++L++ +NK++  P  + KL +LK L
Sbjct: 133 LPAEIKLLQNLQYLNLSKDRLTILPKGIGELSNLKILNVSYNKVSVFPEEIGKLQNLKDL 192

Query: 199 YLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
            L  NRI+ V   +  L NL  L++ +N++  LP E+G+L+NL TL+L +N L  +PKEI
Sbjct: 193 DLSNNRIQVVSEKVGKLRNLERLNLIENRLTVLPKEIGQLQNLQTLNLGYNKLANIPKEI 252

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
           G    L  LDL  NEL  +P  LG + NL  L+L+ NR+ ++P+ +    +L   ++ G 
Sbjct: 253 GELRSLKELDLSDNELKVLPKELGTIANLQSLKLNDNRIVNLPKEIELLQNLRSLDLSGN 312

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI---------- 368
               LP   +  L ++ ++ LS N+FT  PS    +  ++  +N + N +          
Sbjct: 313 QFKVLPKE-IGRLQNLQSLDLSDNQFTTLPS-EVGELRNLKKLNIDSNPLLPGEKDKIQN 370

Query: 369 ---------------DKIPYGIFSRAKNLSKV-----NMKD-NLLTSLPLDLGTWVGLTE 407
                          D+I Y +   ++N  KV       K+     + P  +  +  L  
Sbjct: 371 LLPNCEIDSSYAGKDDQIYYDLNIASENPLKVLNLSLEYKEYESFYNFPKKILEFRNLRG 430

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           L L    +  + ++I+ L NLE L L  N LK LP  IG L+ L+ L LE N+L++LP E
Sbjct: 431 LGLYDVGLEIIPKEIRRLQNLETLRLGLNRLKTLPKEIGQLKNLRGLSLEANELKTLPKE 490

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
           I  L+ L+ L L  N+    P+ IG L  L  L +  N L ++P EIG L+NL  L L+D
Sbjct: 491 IEQLQNLRGLNLHQNRFKIFPKEIGQLRKLQKLDLSVNQLTTLPAEIGQLQNLQELNLSD 550

Query: 528 N 528
           N
Sbjct: 551 N 551



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 135/431 (31%), Positives = 211/431 (48%), Gaps = 40/431 (9%)

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
           +L N +  ++L L   +L  LP  V  L +L+ L L FN + T+  +I+ L  L  L + 
Sbjct: 44  ALRNPKDAQILVLSSQELTVLPWEVGNLGNLQELNLAFNELSTIPEEIKRLQKLQSLDLY 103

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
            N++  LPPE+G+L+NL  L L+ N L  LP EI     L  L+L  + L  +P  +G L
Sbjct: 104 GNRLEALPPEIGQLQNLSWLSLSKNQLATLPAEIKLLQNLQYLNLSKDRLTILPKGIGEL 163

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
            NL  L +SYN++   PE + K  +L + ++    +  + +  +  L ++  + L  N+ 
Sbjct: 164 SNLKILNVSYNKVSVFPEEIGKLQNLKDLDLSNNRIQVVSEK-VGKLRNLERLNLIENRL 222

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
           T  P     Q  ++ ++N  +N++  IP  I    ++L ++++ DN L  LP +LGT   
Sbjct: 223 TVLPK-EIGQLQNLQTLNLGYNKLANIPKEI-GELRSLKELDLSDNELKVLPKELGTIAN 280

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L  L L  N+I  L ++I+ L NL  L LS N  K LP  IG L+ L+ LDL +N+  +L
Sbjct: 281 LQSLKLNDNRIVNLPKEIELLQNLRSLDLSGNQFKVLPKEIGRLQNLQSLDLSDNQFTTL 340

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL--------SYLS-----------VGEN 505
           P+E+G L+ L++L + SN L  LP     + NL        SY               EN
Sbjct: 341 PSEVGELRNLKKLNIDSNPL--LPGEKDKIQNLLPNCEIDSSYAGKDDQIYYDLNIASEN 398

Query: 506 NLQ---------------SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLD 550
            L+               + P++I    NL  L L D   L  IP E+    NL+ + L 
Sbjct: 399 PLKVLNLSLEYKEYESFYNFPKKILEFRNLRGLGLYD-VGLEIIPKEIRRLQNLETLRLG 457

Query: 551 NCPLSQIPSEI 561
              L  +P EI
Sbjct: 458 LNRLKTLPKEI 468



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 195/389 (50%), Gaps = 23/389 (5%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+ +LDLS + I  +   V KL +LE L L  N+L  LP +IG + NL  L L  N 
Sbjct: 185 KLQNLKDLDLSNNRIQVVSEKVGKLRNLERLNLIENRLTVLPKEIGQLQNLQTLNLGYNK 244

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L ++P  +  L+ L+ LDL  N+L  LP  +  + +L+ L L  NRI  +  +I+ L NL
Sbjct: 245 LANIPKEIGELRSLKELDLSDNELKVLPKELGTIANLQSLKLNDNRIVNLPKEIELLQNL 304

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV-NI 277
             L +  N+ + LP E+G L+NL +LDL+ N    LP E+G    L  L++  N L+   
Sbjct: 305 RSLDLSGNQFKVLPKEIGRLQNLQSLDLSDNQFTTLPSEVGELRNLKKLNIDSNPLLPGE 364

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
            D + NL+    +  SY                ++   +    S  P  +L       N+
Sbjct: 365 KDKIQNLLPNCEIDSSY------------AGKDDQIYYDLNIASENPLKVL-------NL 405

Query: 338 TLSRNKFTAYPSGGPT--QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
           +L   ++ ++ +      +F ++  +      ++ IP  I  R +NL  + +  N L +L
Sbjct: 406 SLEYKEYESFYNFPKKILEFRNLRGLGLYDVGLEIIPKEI-RRLQNLETLRLGLNRLKTL 464

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L  L+L  N++  L ++I+ L NL  L L  N  K  P  IG LRKL+ LD
Sbjct: 465 PKEIGQLKNLRGLSLEANELKTLPKEIEQLQNLRGLNLHQNRFKIFPKEIGQLRKLQKLD 524

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQL 484
           L  N+L +LP EIG L+ LQ L L  N L
Sbjct: 525 LSVNQLTTLPAEIGQLQNLQELNLSDNPL 553



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 93/191 (48%), Gaps = 12/191 (6%)

Query: 81  KKEPIQADLNIEKEFLRCKEENILNLDLSKS---SITHLPPSVEKLTHLEELYLYGNKLA 137
           K + I  DLNI  E        +LNL L      S  + P  + +  +L  L LY   L 
Sbjct: 384 KDDQIYYDLNIASE----NPLKVLNLSLEYKEYESFYNFPKKILEFRNLRGLGLYDVGLE 439

Query: 138 SLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
            +P +I  + NL  L L  N L +LP  +  L+ LR L L  N+L  LP  + +L +L+ 
Sbjct: 440 IIPKEIRRLQNLETLRLGLNRLKTLPKEIGQLKNLRGLSLEANELKTLPKEIEQLQNLRG 499

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHL-----E 252
           L L  NR K    +I  L  L  L +  N++  LP E+G+L+NL  L+L+ N L     E
Sbjct: 500 LNLHQNRFKIFPKEIGQLRKLQKLDLSVNQLTTLPAEIGQLQNLQELNLSDNPLSLKEKE 559

Query: 253 ELPKEIGNCTM 263
            + K + NC +
Sbjct: 560 RIRKLLPNCKI 570



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 1/96 (1%)

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
            ++ N +  + L L   +L  LP E+G L  LQ L L  N+L ++P  I  L  L  L +
Sbjct: 43  KALRNPKDAQILVLSSQELTVLPWEVGNLGNLQELNLAFNELSTIPEEIKRLQKLQSLDL 102

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFEL 538
             N L+++P EIG L+NL  L L+ N  L  +P E+
Sbjct: 103 YGNRLEALPPEIGQLQNLSWLSLSKNQ-LATLPAEI 137


>gi|17227620|ref|NP_484168.1| hypothetical protein alr0124 [Nostoc sp. PCC 7120]
 gi|17135102|dbj|BAB77648.1| leucine-rich-repeat protein [Nostoc sp. PCC 7120]
          Length = 1119

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 155/483 (32%), Positives = 241/483 (49%), Gaps = 36/483 (7%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE 156
           +   E    LDLS   +T LP  + KL  LE L L G ++     ++GY      LG   
Sbjct: 12  QAATEGWRELDLSGQELTELPGEIGKLQQLESLIL-GKQVGGY-EKVGYRIFQKALG--- 66

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N+L +LP  L +L  LR LD+  N L  +P VV ++  L+ L L    I+          
Sbjct: 67  NNLKTLPIELLSLPNLRKLDISGNPLEGIPDVVMQILHLEELIL----IRV--------- 113

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
                     ++ E+P  L +L NL  L L+ N + E+P+ +   T L  L+L +N++  
Sbjct: 114 ----------QLTEIPEALAKLTNLTQLILSDNQITEIPEALAKLTNLTQLNLSYNQITE 163

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           IP+ L  L NLT+L LSYN++  +PE L+K  +L + N+ G   + +P+ L + LT++  
Sbjct: 164 IPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLRGNQRTEIPEAL-AKLTNLTR 222

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + LS N+ T  P     + T++  +    NQI +IP  I ++  NL+ + +  N +  +P
Sbjct: 223 LNLSYNQRTEIPEA-LAKLTNLTQLILSDNQIKEIPETI-AKLTNLTHLILSGNQIKEIP 280

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +     LT+L L  NQI ++ E I  L NL  L L  N +K++P +I  L  L  L L
Sbjct: 281 ETIAKLTNLTQLGLDGNQIKEIPEAIAKLTNLTQLGLDGNQIKEIPEAITKLTNLTHLIL 340

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+++ +P  I  L  L +L L SNQ+  +P  +  LTNL+ L +  N +  IPE +  
Sbjct: 341 SGNQIKEIPETIAKLTNLTQLALSSNQITEIPEVLAQLTNLTQLFLSSNQITQIPEALAP 400

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP----SEIVVGGPSLIIRY 572
           L NL TL+L  N  +  IP  +     L+++ L   PL   P    S   VG    I  Y
Sbjct: 401 LTNLTTLHLRVNQ-ITQIPEAIESLPKLELLDLRGNPLPISPEILGSVYQVGSVEEIFNY 459

Query: 573 LKM 575
           L++
Sbjct: 460 LRL 462


>gi|404371791|ref|ZP_10977093.1| hypothetical protein CSBG_00910 [Clostridium sp. 7_2_43FAA]
 gi|226912083|gb|EEH97284.1| hypothetical protein CSBG_00910 [Clostridium sp. 7_2_43FAA]
          Length = 632

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 142/427 (33%), Positives = 229/427 (53%), Gaps = 32/427 (7%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+L ++L  + I  +P  + KL  L++L L  N+L  +P+ IG +  L  L +++NSLTS
Sbjct: 120 NLLEMNLDGNHINEIPEEIVKLESLDKLILSRNRLNKVPTYIGAMKKLRWLDVSKNSLTS 179

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + N+  L  LD+  NK+ E+P  +  L  L  L    N + T   DI  L  L  L
Sbjct: 180 LPKEIGNIITLDRLDISQNKIKEIPSEINNLKKLIRLLAYENELTTFPSDIVGLPVLREL 239

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++ +N I ELP  +G    L+ L +  N L  LP+ IG    L TL + +NEL+N+PD +
Sbjct: 240 NLFNNMITELPDNIGSFPELMYLRIGENKLTSLPESIGELEKLFTLSVNNNELINLPDNI 299

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
            NL  LT + LS N+LE +P+ + +   + E N++   +   PD  LS+L  +  I +S 
Sbjct: 300 INLSKLTEINLSNNKLERLPDNIGRLTSVKELNLDNNNIKIFPD--LSNLVDLKTIYISN 357

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N    +                   +ID +P  +         +++  NLLTS+P+    
Sbjct: 358 NNIINF-------------------EIDFLPTSV-------QYIDLSRNLLTSVPI---- 387

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +  L+L  N+I  + E I+++ ++  L L+ NL+K LP +IG++  L  ++L  NKL
Sbjct: 388 IENIKHLDLSFNKIENIQEGIKSMNSISYLGLNGNLIKTLPKTIGDMITLTGINLSNNKL 447

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
             +P+E G L  LQ L L +N+L+ +P  +G +T L +LS+  N L  IP+EIGT+E L 
Sbjct: 448 VEIPSEFGNLVNLQGLYLSNNELLEIPNTLGSITALRFLSLDNNRLTIIPKEIGTIEKLK 507

Query: 522 TLYLNDN 528
            + L++N
Sbjct: 508 KVDLSNN 514



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 120/211 (56%), Gaps = 2/211 (0%)

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
           G +   ++  +N + N I++IP  I  + ++L K+ +  N L  +P  +G    L  L++
Sbjct: 114 GISYLPNLLEMNLDGNHINEIPEEIV-KLESLDKLILSRNRLNKVPTYIGAMKKLRWLDV 172

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N ++ L ++I N++ L+ L +S N +K++PS I NL+KL  L   EN+L + P++I  
Sbjct: 173 SKNSLTSLPKEIGNIITLDRLDISQNKIKEIPSEINNLKKLIRLLAYENELTTFPSDIVG 232

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+ L L +N +  LP  IG    L YL +GEN L S+PE IG LE L TL +N+N  
Sbjct: 233 LPVLRELNLFNNMITELPDNIGSFPELMYLRIGENKLTSLPESIGELEKLFTLSVNNNEL 292

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           + N+P  +   S L  ++L N  L ++P  I
Sbjct: 293 I-NLPDNIINLSKLTEINLSNNKLERLPDNI 322


>gi|428310898|ref|YP_007121875.1| hypothetical protein Mic7113_2682 [Microcoleus sp. PCC 7113]
 gi|428252510|gb|AFZ18469.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
          Length = 1126

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 158/438 (36%), Positives = 232/438 (52%), Gaps = 52/438 (11%)

Query: 140  PSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILY 199
            P +I  +TN T L LA   LT LP  + NL                       T L  LY
Sbjct: 737  PKEIFQLTNQTSLNLAGKQLTELPKEIGNL-----------------------TDLTWLY 773

Query: 200  LRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH-LEELPKEI 258
            L  N++ T+ P+I  L NL +LS+ +N++ +LP E+G L +L  L L+ N+ L+ LPK+I
Sbjct: 774  LNRNQLATLPPEIGNLINLRVLSLENNRLTKLPKEIGNLSHLRGLYLSGNYQLKVLPKKI 833

Query: 259  GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
             N T L  L+L  N+L  +P  +GNL NLT+L LS N+L+ +P+ +    +L   ++ G 
Sbjct: 834  SNLTNLTQLNLSSNQLKVLPKEIGNLTNLTQLNLSSNQLKVLPKEIGNLTNLTLLDLNGN 893

Query: 319  ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
             L+ LP  +  +LT++  + LSRN+ TA P                  +I  +       
Sbjct: 894  QLTELPPEI-GNLTNLEVLYLSRNQLTALPK-----------------EIGNL------- 928

Query: 379  AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
              NL+++++ +N    LP ++G    L  L L   Q++ L  +I NL NL+ L L +N L
Sbjct: 929  -TNLTELDLSENE-NVLPAEIGNLTNLRRLYLNRKQLTVLVPEIGNLTNLKTLSLKDNQL 986

Query: 439  KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
              LP  IG L +LK LD+ +N+L  LP EIG L  L  L L  NQL +LP+ IG+LTNL+
Sbjct: 987  IALPPEIGKLTQLKWLDINKNQLRQLPPEIGNLTNLTELYLYDNQLTALPKEIGNLTNLT 1046

Query: 499  YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L + +N L ++P E+G L NL  LYL+ N  L  +P E+   +NL  +S  N  L    
Sbjct: 1047 KLHLYKNKLMALPPEMGRLTNLIELYLDYNQ-LTALPPEIGNLTNLTQLSFYNNQLISPS 1105

Query: 559  SEIVVGGPSLIIRYLKMQ 576
             EIV  G   I+ YL+ Q
Sbjct: 1106 PEIVKQGTQAILAYLREQ 1123



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 153/400 (38%), Positives = 219/400 (54%), Gaps = 30/400 (7%)

Query: 117  PPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLD 176
            P  + +LT+   L L G +L  LP +IG +T+LT L L  N L +LP  + NL  LRVL 
Sbjct: 737  PKEIFQLTNQTSLNLAGKQLTELPKEIGNLTDLTWLYLNRNQLATLPPEIGNLINLRVLS 796

Query: 177  LRHNKLNELPMVVYKLTSLKILYLRFN-RIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
            L +N+L +LP  +  L+ L+ LYL  N ++K +   I  L+NL+ L++  N+++ LP E+
Sbjct: 797  LENNRLTKLPKEIGNLSHLRGLYLSGNYQLKVLPKKISNLTNLTQLNLSSNQLKVLPKEI 856

Query: 236  GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
            G L NL  L+L+ N L+ LPKEIGN T L  LDL  N+L  +P  +GNL NL  L LS N
Sbjct: 857  GNLTNLTQLNLSSNQLKVLPKEIGNLTNLTLLDLNGNQLTELPPEIGNLTNLEVLYLSRN 916

Query: 296  RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA-YPSGGPTQ 354
            +L ++P+ +    +L E ++     + LP   + +LT++  + L+R + T   P  G   
Sbjct: 917  QLTALPKEIGNLTNLTELDLSENE-NVLP-AEIGNLTNLRRLYLNRKQLTVLVPEIG--- 971

Query: 355  FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
                                      NL  +++KDN L +LP ++G    L  L++  NQ
Sbjct: 972  -----------------------NLTNLKTLSLKDNQLIALPPEIGKLTQLKWLDINKNQ 1008

Query: 415  ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
            + +L  +I NL NL  L L +N L  LP  IGNL  L  L L +NKL +LP E+G L  L
Sbjct: 1009 LRQLPPEIGNLTNLTELYLYDNQLTALPKEIGNLTNLTKLHLYKNKLMALPPEMGRLTNL 1068

Query: 475  QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
              L L  NQL +LP  IG+LTNL+ LS   N L S   EI
Sbjct: 1069 IELYLDYNQLTALPPEIGNLTNLTQLSFYNNQLISPSPEI 1108



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 144/410 (35%), Positives = 199/410 (48%), Gaps = 76/410 (18%)

Query: 102  NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
            N  +L+L+   +T LP  +  LT L  LYL  N+LA+LP +IG + NL  L L  N LT 
Sbjct: 745  NQTSLNLAGKQLTELPKEIGNLTDLTWLYLNRNQLATLPPEIGNLINLRVLSLENNRLTK 804

Query: 162  LPDSLANLQQLRVLDLRHN-KLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  + NL  LR L L  N +L  LP  +  LT+L  L L  N++K +  +I  L+NL+ 
Sbjct: 805  LPKEIGNLSHLRGLYLSGNYQLKVLPKKISNLTNLTQLNLSSNQLKVLPKEIGNLTNLTQ 864

Query: 221  LSMRDNKIR-----------------------ELPPELGELKNLVTLDLAHNHLEELPKE 257
            L++  N+++                       ELPPE+G L NL  L L+ N L  LPKE
Sbjct: 865  LNLSSNQLKVLPKEIGNLTNLTLLDLNGNQLTELPPEIGNLTNLEVLYLSRNQLTALPKE 924

Query: 258  IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVE 316
            IGN T L  LDL  NE V +P  +GNL NL RL L+  +L   VPE              
Sbjct: 925  IGNLTNLTELDLSENENV-LPAEIGNLTNLRRLYLNRKQLTVLVPE-------------- 969

Query: 317  GCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIF 376
                       + +LT++  ++L  N+  A P                  +I K+     
Sbjct: 970  -----------IGNLTNLKTLSLKDNQLIALPP-----------------EIGKL----- 996

Query: 377  SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
                 L  +++  N L  LP ++G    LTEL L  NQ++ L ++I NL NL  L L  N
Sbjct: 997  ---TQLKWLDINKNQLRQLPPEIGNLTNLTELYLYDNQLTALPKEIGNLTNLTKLHLYKN 1053

Query: 437  LLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
             L  LP  +G L  L  L L+ N+L +LP EIG L  L +L   +NQL+S
Sbjct: 1054 KLMALPPEMGRLTNLIELYLDYNQLTALPPEIGNLTNLTQLSFYNNQLIS 1103


>gi|75907715|ref|YP_322011.1| small GTP-binding protein domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75701440|gb|ABA21116.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
           29413]
          Length = 1107

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/375 (34%), Positives = 211/375 (56%), Gaps = 7/375 (1%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+S + +  +P  V ++ HLEEL L   ++  +P  I  +TNLT L L  N +T 
Sbjct: 81  NLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPEAIANLTNLTHLILFSNQITE 140

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
            P+++A L  L  LDL  N++ E+P  +  LT+L  L L  N+I  +   I  L+NL+ L
Sbjct: 141 TPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEAIANLTNLTQL 200

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + DN+I E+P  +  L NL  LDL  N + E+PK I N T L  L L  N++  IP+ +
Sbjct: 201 DLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAIANLTNLTHLILFSNQITEIPEAI 260

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
            NL NL +L LSYN++  +P+ ++   +L +  +    ++ +P+  +++LT++  + LS 
Sbjct: 261 ANLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKITEIPEA-IANLTNLTQLDLSD 319

Query: 342 NKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           NK T  P      T  T +Y   F +N+I +I   I ++  NL+++++  N +T +P  +
Sbjct: 320 NKITEIPETIANLTNLTELY---FNYNKITQIAEAI-AKLTNLTELHLSSNQITQIPEAI 375

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
                LTEL L  N+I++++E I  L NL  L L  N + ++P ++ +L KL+ LDL  N
Sbjct: 376 ANLTNLTELYLNYNKITQIAEAIAKLTNLTELHLDGNQITQIPEALESLPKLEKLDLRGN 435

Query: 460 KLESLPNEIGFLKEL 474
            L   P  +G + E+
Sbjct: 436 PLPISPEILGSVYEV 450



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 215/419 (51%), Gaps = 21/419 (5%)

Query: 128 ELYLYGNKLASLPSQIGYVTNLTCLGLAE------------------NSLTSLPDSLANL 169
           EL L G +L  LP +IG +  L  L L +                  N+L +LP  L  L
Sbjct: 20  ELDLSGQELTELPGEIGKLQQLESLILGKQVGGYEWVGDRYLKKVSGNNLKTLPLELLGL 79

Query: 170 QQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR 229
             LR LD+  N L  +P +V ++  L+ L L    I  +   I  L+NL+ L +  N+I 
Sbjct: 80  PNLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPEAIANLTNLTHLILFSNQIT 139

Query: 230 ELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTR 289
           E P  + +L NL  LDL+ N + E+P+ I N T L  L L  N++  IP+ + NL NLT+
Sbjct: 140 ETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEAIANLTNLTQ 199

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS 349
           L L  N++  +P+ ++   +L + ++    ++ +P   +++LT++ ++ L  N+ T  P 
Sbjct: 200 LDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKA-IANLTNLTHLILFSNQITEIPE 258

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
                 T++  ++  +NQI +IP  I +   NL+++ + DN +T +P  +     LT+L+
Sbjct: 259 -AIANLTNLMQLDLSYNQITEIPKAI-ANLTNLTQLVLSDNKITEIPEAIANLTNLTQLD 316

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           L  N+I+++ E I NL NL  L  + N + ++  +I  L  L  L L  N++  +P  I 
Sbjct: 317 LSDNKITEIPETIANLTNLTELYFNYNKITQIAEAIAKLTNLTELHLSSNQITQIPEAIA 376

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            L  L  L L  N++  +  AI  LTNL+ L +  N +  IPE + +L  L  L L  N
Sbjct: 377 NLTNLTELYLNYNKITQIAEAIAKLTNLTELHLDGNQITQIPEALESLPKLEKLDLRGN 435



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 128/410 (31%), Positives = 208/410 (50%), Gaps = 26/410 (6%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           +S +++  LP  +  L +L +L + GN L  +P  +  + +L  L L    +T +P+++A
Sbjct: 64  VSGNNLKTLPLELLGLPNLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPEAIA 123

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
           NL  L  L L  N++ E P  + KLT+L  L L  N+I  +   I  L+NL+ L +  N+
Sbjct: 124 NLTNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQ 183

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           I E+P  +  L NL  LDL  N + E+PK I N T L  LDL  N++  IP  + NL NL
Sbjct: 184 ITEIPEAIANLTNLTQLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAIANLTNL 243

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
           T L L  N++  +PE ++   +L + ++    ++ +P   +++LT++  + LS NK T  
Sbjct: 244 THLILFSNQITEIPEAIANLTNLMQLDLSYNQITEIPKA-IANLTNLTQLVLSDNKITEI 302

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
           P                            +   NL+++++ DN +T +P  +     LTE
Sbjct: 303 PEA-------------------------IANLTNLTQLDLSDNKITEIPETIANLTNLTE 337

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           L    N+I++++E I  L NL  L LS+N + ++P +I NL  L  L L  NK+  +   
Sbjct: 338 LYFNYNKITQIAEAIAKLTNLTELHLSSNQITQIPEAIANLTNLTELYLNYNKITQIAEA 397

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
           I  L  L  L L  NQ+  +P A+  L  L  L +  N L   PE +G++
Sbjct: 398 IAKLTNLTELHLDGNQITQIPEALESLPKLEKLDLRGNPLPISPEILGSV 447



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 200/350 (57%), Gaps = 3/350 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L +  IT +P ++  LT+L  L L+ N++   P  I  +TNLT L L++N +T +P++
Sbjct: 108 LILIRVEITEIPEAIANLTNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQITEIPEA 167

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +ANL  L  L L  N++ E+P  +  LT+L  L L  N+I  +   I  L+NL+ L + D
Sbjct: 168 IANLTNLTHLILFSNQITEIPEAIANLTNLTQLDLGDNQITEIPKAIANLTNLTQLDLGD 227

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I E+P  +  L NL  L L  N + E+P+ I N T L+ LDL +N++  IP  + NL 
Sbjct: 228 NQITEIPKAIANLTNLTHLILFSNQITEIPEAIANLTNLMQLDLSYNQITEIPKAIANLT 287

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NLT+L LS N++  +PE ++   +L + ++    ++ +P+ + ++LT++  +  + NK T
Sbjct: 288 NLTQLVLSDNKITEIPEAIANLTNLTQLDLSDNKITEIPETI-ANLTNLTELYFNYNKIT 346

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
              +    + T++  ++   NQI +IP  I +   NL+++ +  N +T +   +     L
Sbjct: 347 QI-AEAIAKLTNLTELHLSSNQITQIPEAI-ANLTNLTELYLNYNKITQIAEAIAKLTNL 404

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           TEL+L  NQI+++ E +++L  LE L L  N L   P  +G++ ++  ++
Sbjct: 405 TELHLDGNQITQIPEALESLPKLEKLDLRGNPLPISPEILGSVYEVGSVE 454



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 143/462 (30%), Positives = 218/462 (47%), Gaps = 55/462 (11%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE 156
           +   E    LDLS   +T LP  + KL  LE L L G ++        +V +     ++ 
Sbjct: 12  QAATEGWRELDLSGQELTELPGEIGKLQQLESLIL-GKQVGGYE----WVGDRYLKKVSG 66

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N+L +LP  L  L  LR LD+  N L  +P +V ++  L+ L L    I+          
Sbjct: 67  NNLKTLPLELLGLPNLRKLDISGNPLERIPDLVTQILHLEELIL----IRV--------- 113

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
                     +I E+P  +  L NL  L L  N + E P+ I   T L  LDL  N++  
Sbjct: 114 ----------EITEIPEAIANLTNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQITE 163

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           IP+ + NL NLT L L  N++  +PE ++                        +LT++  
Sbjct: 164 IPEAIANLTNLTHLILFSNQITEIPEAIA------------------------NLTNLTQ 199

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L  N+ T  P       T++  ++   NQI +IP  I +   NL+ + +  N +T +P
Sbjct: 200 LDLGDNQITEIPKA-IANLTNLTQLDLGDNQITEIPKAI-ANLTNLTHLILFSNQITEIP 257

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +     L +L+L  NQI+++ + I NL NL  LVLS+N + ++P +I NL  L  LDL
Sbjct: 258 EAIANLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKITEIPEAIANLTNLTQLDL 317

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
            +NK+  +P  I  L  L  L    N++  +  AI  LTNL+ L +  N +  IPE I  
Sbjct: 318 SDNKITEIPETIANLTNLTELYFNYNKITQIAEAIAKLTNLTELHLSSNQITQIPEAIAN 377

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L NL  LYLN N  +  I   +A  +NL  + LD   ++QIP
Sbjct: 378 LTNLTELYLNYNK-ITQIAEAIAKLTNLTELHLDGNQITQIP 418



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/304 (34%), Positives = 174/304 (57%), Gaps = 3/304 (0%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            K  N+  LDLS + IT +P ++  LT+L  L L+ N++  +P  I  +TNLT L L +N
Sbjct: 146 AKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEAIANLTNLTQLDLGDN 205

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            +T +P ++ANL  L  LDL  N++ E+P  +  LT+L  L L  N+I  +   I  L+N
Sbjct: 206 QITEIPKAIANLTNLTQLDLGDNQITEIPKAIANLTNLTHLILFSNQITEIPEAIANLTN 265

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N+I E+P  +  L NL  L L+ N + E+P+ I N T L  LDL  N++  I
Sbjct: 266 LMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKITEIPEAIANLTNLTQLDLSDNKITEI 325

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P+ + NL NLT L  +YN++  + E ++K  +L E ++    ++ +P+  +++LT++  +
Sbjct: 326 PETIANLTNLTELYFNYNKITQIAEAIAKLTNLTELHLSSNQITQIPEA-IANLTNLTEL 384

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            L+ NK T   +    + T++  ++ + NQI +IP  + S  K L K++++ N L   P 
Sbjct: 385 YLNYNKITQI-AEAIAKLTNLTELHLDGNQITQIPEALESLPK-LEKLDLRGNPLPISPE 442

Query: 398 DLGT 401
            LG+
Sbjct: 443 ILGS 446


>gi|392396973|ref|YP_006433574.1| hypothetical protein Fleli_1349 [Flexibacter litoralis DSM 6794]
 gi|390528051|gb|AFM03781.1| leucine-rich repeat (LRR) protein [Flexibacter litoralis DSM 6794]
          Length = 682

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 150/449 (33%), Positives = 231/449 (51%), Gaps = 9/449 (2%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           +P  +  L HL+ LYL  +   ++P +I  +TNL  L LA N L   P  L  L+ L  L
Sbjct: 93  IPSEIGNLIHLDTLYLAVSDFKTIPLEIAKLTNLKYLHLASNKLEHFPPQLLTLKNLTSL 152

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
            LR+NK +  P+ V  + SLK L +  N IK +H  I  L  L  L +   ++ E P E+
Sbjct: 153 SLRNNKFDVFPVGVTNIKSLKKLDIDTNPIKKIHESIANLIELEELDISGMELTEFPLEI 212

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP-DMLGNLINLTRLRLSY 294
             L  L +L+++ N L+ +P++I   T L  LD+  N+  N   D +  L  L+ L +  
Sbjct: 213 VGLTKLRSLNVSQNQLKTIPQDIEKLTELEELDIGFNDYSNGSLDAISKLTKLSFLSVVS 272

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGP 352
           + L+ +   L     L   +     L   P+ + S L S+  + L  N+ T  P+  G  
Sbjct: 273 SELKDISFQLENLKKLEWLSFSYNELIEFPNQI-SKLDSLKELMLDDNQITTIPNEIGNL 331

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
            + T +Y    E N+I ++P  I S  +NL ++ + DN  TS P+ +     L EL L  
Sbjct: 332 KKLTRLY---LEENKISELPSQI-SELQNLERLRLSDNKFTSFPMQITNLENLKELKLSK 387

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N+I+KL   I NL  LE L L++N  ++LP+ I  L +LK L +  NKLESLPN I  L 
Sbjct: 388 NKINKLPSQISNLKKLEDLYLNHNKFEELPTEILELNELKVLQINHNKLESLPNTISILD 447

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
           +L+ L L  N+L S P  I    NL  LS+ ++ L+++P+ I  L+ +  L L+ N    
Sbjct: 448 KLEELDLGYNRLTSFPLVILKFENLGRLSLEKSELKTLPKGITKLKKIRMLNLDSNR-FE 506

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             P E+     +  +SLD+  +S IP+EI
Sbjct: 507 VFPIEILEFQKISYLSLDDNKISSIPNEI 535



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 227/486 (46%), Gaps = 58/486 (11%)

Query: 102 NILNLD---LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           N+++LD   L+ S    +P  + KLT+L+ L+L  NKL   P Q+  + NLT L L  N 
Sbjct: 99  NLIHLDTLYLAVSDFKTIPLEIAKLTNLKYLHLASNKLEHFPPQLLTLKNLTSLSLRNNK 158

Query: 159 LTSLP-----------------------DSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
               P                       +S+ANL +L  LD+   +L E P+ +  LT L
Sbjct: 159 FDVFPVGVTNIKSLKKLDIDTNPIKKIHESIANLIELEELDISGMELTEFPLEIVGLTKL 218

Query: 196 KILYLRFNRIKTVHPDIQ------------------------YLSNLSMLSMRDNKIREL 231
           + L +  N++KT+  DI+                         L+ LS LS+  ++++++
Sbjct: 219 RSLNVSQNQLKTIPQDIEKLTELEELDIGFNDYSNGSLDAISKLTKLSFLSVVSSELKDI 278

Query: 232 PPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLR 291
             +L  LK L  L  ++N L E P +I     L  L L  N++  IP+ +GNL  LTRL 
Sbjct: 279 SFQLENLKKLEWLSFSYNELIEFPNQISKLDSLKELMLDDNQITTIPNEIGNLKKLTRLY 338

Query: 292 LSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGG 351
           L  N++  +P  +S+  +L    +     +S P   +++L ++  + LS+NK    PS  
Sbjct: 339 LEENKISELPSQISELQNLERLRLSDNKFTSFPMQ-ITNLENLKELKLSKNKINKLPS-Q 396

Query: 352 PTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLG 411
            +    +  +   HN+ +++P  I      L  + +  N L SLP  +     L EL+LG
Sbjct: 397 ISNLKKLEDLYLNHNKFEELPTEIL-ELNELKVLQINHNKLESLPNTISILDKLEELDLG 455

Query: 412 TNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
            N+++     I    NL  L L  + LK LP  I  L+K++ L+L+ N+ E  P EI   
Sbjct: 456 YNRLTSFPLVILKFENLGRLSLEKSELKTLPKGITKLKKIRMLNLDSNRFEVFPIEILEF 515

Query: 472 KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
           +++  L L  N++ S+P  I  L  +  LS+  N L  +   +     L ++YL+     
Sbjct: 516 QKISYLSLDDNKISSIPNEISKLKRMYVLSLSRNKLSELS-FLYKFPRLSSVYLD----Y 570

Query: 532 NNIPFE 537
           N I FE
Sbjct: 571 NRISFE 576



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 181/357 (50%), Gaps = 18/357 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L +  S +  +   +E L  LE L    N+L   P+QI  + +L  L L +N +T++P+ 
Sbjct: 268 LSVVSSELKDISFQLENLKKLEWLSFSYNELIEFPNQISKLDSLKELMLDDNQITTIPNE 327

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + NL++L  L L  NK++ELP  + +L +L+ L L  N+  +    I  L NL  L +  
Sbjct: 328 IGNLKKLTRLYLEENKISELPSQISELQNLERLRLSDNKFTSFPMQITNLENLKELKLSK 387

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NKI +LP ++  LK L  L L HN  EELP EI     L  L + HN+L ++P+ +  L 
Sbjct: 388 NKINKLPSQISNLKKLEDLYLNHNKFEELPTEILELNELKVLQINHNKLESLPNTISILD 447

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L YNRL S P  + K  +L   ++E   L +LP G ++ L  I  + L  N+F 
Sbjct: 448 KLEELDLGYNRLTSFPLVILKFENLGRLSLEKSELKTLPKG-ITKLKKIRMLNLDSNRFE 506

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P     +F  +  ++ + N+I  IP  I S+ K +  +++  N L+ L   L  +  L
Sbjct: 507 VFPI-EILEFQKISYLSLDDNKISSIPNEI-SKLKRMYVLSLSRNKLSELSF-LYKFPRL 563

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
           + + L  N+IS   E+I+ +             K LP S  +  K K   +E+N++E
Sbjct: 564 SSVYLDYNRIS--FEEIEKVK------------KALPFSHLSFWKQKAYKVEKNEIE 606


>gi|260841659|ref|XP_002614028.1| hypothetical protein BRAFLDRAFT_67388 [Branchiostoma floridae]
 gi|229299418|gb|EEN70037.1| hypothetical protein BRAFLDRAFT_67388 [Branchiostoma floridae]
          Length = 1609

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 153/476 (32%), Positives = 248/476 (52%), Gaps = 32/476 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +NI  L L+++ +T +PP+V +L+ LE+L L GNK   L  Q+  +TNL  L L+   + 
Sbjct: 225 KNIRVLRLNRAGMTTVPPAVLELSQLEKLDLSGNKQIKLSDQLLGLTNLKVLRLSRTEMA 284

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           S+P+ +  L  L  L L  N L  L + V +L+ +K L L    ++T+ P++  L+ L  
Sbjct: 285 SVPEVVWKLTHLEELHLLSNPLQTLSVKVGQLSRIKRLDLSNCHLRTLPPEVGTLTQLER 344

Query: 221 LSMRDNK-IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
           L + +N+ ++ LP EL ++ N+  LDL++  L  LP E+G  T L  LDL  N L  +P 
Sbjct: 345 LKVANNRALQTLPGELWQVTNIKRLDLSNCQLHTLPPEVGTLTQLEWLDLSFNTLQTLPR 404

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            LG++ N+ RL LS+ +L ++P  + K  HL    V+   L +LP G L  + SI ++ L
Sbjct: 405 ELGHVTNIKRLDLSHCQLHTLPPQVGKLTHLKWLKVKNNPLQTLP-GELGQVASIKHLDL 463

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           S       P    T  T +  +   +N +  +P G   +  N+ ++++    L +LP ++
Sbjct: 464 SNCWLHTLPPEVGT-LTQLERLKVANNPLQTLP-GELWKVTNIKRLDLSSCWLDTLPPEV 521

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           GT                       L  LE L L  N L+ LP  IG L  +K L+L   
Sbjct: 522 GT-----------------------LTQLEWLSLQGNPLQMLPKQIGQLTAIKHLNLSFC 558

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L +LP E+G LK+L+ L LQ N L  LP+ + +LT++ ++++    LQ +P E G L  
Sbjct: 559 QLHTLPPEMGTLKQLEWLSLQGNPLQMLPKQVENLTHIKWMNLSHCRLQMLPPEFGKLTQ 618

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKM 575
           L  LYL+ N  L  +P      +N++ + L NC L  +P E+   G    + YL++
Sbjct: 619 LERLYLSCNGELQTLPTRQL--TNIKHLDLSNCSLQTLPPEV---GELKHVEYLRL 669



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 134/428 (31%), Positives = 218/428 (50%), Gaps = 7/428 (1%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNK-LASLPSQIGYVTNLTCLGLAENSLTS 161
           I  LDLS   +  LPP V  LT LE L +  N+ L +LP ++  VTN+  L L+   L +
Sbjct: 319 IKRLDLSNCHLRTLPPEVGTLTQLERLKVANNRALQTLPGELWQVTNIKRLDLSNCQLHT 378

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L QL  LDL  N L  LP  +  +T++K L L   ++ T+ P +  L++L  L
Sbjct: 379 LPPEVGTLTQLEWLDLSFNTLQTLPRELGHVTNIKRLDLSHCQLHTLPPQVGKLTHLKWL 438

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +++N ++ LP ELG++ ++  LDL++  L  LP E+G  T L  L + +N L  +P  L
Sbjct: 439 KVKNNPLQTLPGELGQVASIKHLDLSNCWLHTLPPEVGTLTQLERLKVANNPLQTLPGEL 498

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             + N+ RL LS   L+++P  +     L   +++G  L  LP  +   LT+I ++ LS 
Sbjct: 499 WKVTNIKRLDLSSCWLDTLPPEVGTLTQLEWLSLQGNPLQMLPKQI-GQLTAIKHLNLSF 557

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
            +    P    T    +  ++ + N +  +P  +     ++  +N+    L  LP + G 
Sbjct: 558 CQLHTLPPEMGT-LKQLEWLSLQGNPLQMLPKQV-ENLTHIKWMNLSHCRLQMLPPEFGK 615

Query: 402 WVGLTELNLGTN-QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
              L  L L  N ++  L    + L N++ L LSN  L+ LP  +G L+ ++ L L  N 
Sbjct: 616 LTQLERLYLSCNGELQTLP--TRQLTNIKHLDLSNCSLQTLPPEVGELKHVEYLRLSSNP 673

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L+ LP E+  L  ++ L + + +L  LP  +G +T L  L +  N LQ +P EI    NL
Sbjct: 674 LQKLPPEVRHLTNIKHLDMSNCRLNELPIEVGTMTQLRQLDLRYNQLQMLPVEITQHINL 733

Query: 521 HTLYLNDN 528
           + L +  N
Sbjct: 734 YHLDVRGN 741



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 136/416 (32%), Positives = 208/416 (50%), Gaps = 33/416 (7%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           NI  LDLS   +  LPP V  LT LE L L  N L +LP ++G+VTN+  L L+   L +
Sbjct: 365 NIKRLDLSNCQLHTLPPEVGTLTQLEWLDLSFNTLQTLPRELGHVTNIKRLDLSHCQLHT 424

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L  L+ L +++N L  LP  + ++ S+K L L    + T+ P++  L+ L  L
Sbjct: 425 LPPQVGKLTHLKWLKVKNNPLQTLPGELGQVASIKHLDLSNCWLHTLPPEVGTLTQLERL 484

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + +N ++ LP EL ++ N+  LDL+   L+ LP E+G  T L  L LQ N L  +P  +
Sbjct: 485 KVANNPLQTLPGELWKVTNIKRLDLSSCWLDTLPPEVGTLTQLEWLSLQGNPLQMLPKQI 544

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  +  L LS+ +L ++P  +     L   +++G  L  LP   + +LT I  + LS 
Sbjct: 545 GQLTAIKHLNLSFCQLHTLPPEMGTLKQLEWLSLQGNPLQMLPKQ-VENLTHIKWMNLSH 603

Query: 342 NKFTAYPS--GGPTQFTSVY-SINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
            +    P   G  TQ   +Y S N E   +  +P    +  K+L   N     L +LP +
Sbjct: 604 CRLQMLPPEFGKLTQLERLYLSCNGE---LQTLPTRQLTNIKHLDLSNCS---LQTLPPE 657

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G                        L ++E L LS+N L+KLP  + +L  +K LD+  
Sbjct: 658 VG-----------------------ELKHVEYLRLSSNPLQKLPPEVRHLTNIKHLDMSN 694

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            +L  LP E+G + +L++L L+ NQL  LP  I    NL +L V  N L   P E+
Sbjct: 695 CRLNELPIEVGTMTQLRQLDLRYNQLQMLPVEITQHINLYHLDVRGNPLIRPPAEV 750



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 151/524 (28%), Positives = 254/524 (48%), Gaps = 31/524 (5%)

Query: 79  TKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLAS 138
           T   +P++ ++  E+  +  K + +  LDLS  +   LP  V +L  LE L L  N+  S
Sbjct: 63  TMGTQPMRDEMKREEWKILGKAQPLWTLDLSNQNHKDLPDEVFELEELEALKLTYNESIS 122

Query: 139 LPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK-LNELPMVVYKLTSLKI 197
           L +++  +TNL  L L   +L  LP  +  L  L+VLD+  NK ++   M++ KL  LK+
Sbjct: 123 LSNKLVKLTNLKVLCLENCNLDKLPPVVLKLSHLQVLDISKNKAISLPKMILKKLKKLKV 182

Query: 198 LYLRFNRIKTVHPDI-QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPK 256
           L LR   + T+   I Q  S L  L +  N   +LP EL  LKN+  L L    +  +P 
Sbjct: 183 LKLRDCDLVTIGRQIFQQESQLEELDLSGNMQIDLPDELRTLKNIRVLRLNRAGMTTVPP 242

Query: 257 EIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV-------- 308
            +   + L  LDL  N+ + + D L  L NL  LRLS   + SVPE + K          
Sbjct: 243 AVLELSQLEKLDLSGNKQIKLSDQLLGLTNLKVLRLSRTEMASVPEVVWKLTHLEELHLL 302

Query: 309 ---------------HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
                           +   ++  C L +LP   + +LT +  + ++ N+      G   
Sbjct: 303 SNPLQTLSVKVGQLSRIKRLDLSNCHLRTLPPE-VGTLTQLERLKVANNRALQTLPGELW 361

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q T++  ++  + Q+  +P  + +  + L  +++  N L +LP +LG    +  L+L   
Sbjct: 362 QVTNIKRLDLSNCQLHTLPPEVGTLTQ-LEWLDLSFNTLQTLPRELGHVTNIKRLDLSHC 420

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           Q+  L   +  L +L+ L + NN L+ LP  +G +  +K LDL    L +LP E+G L +
Sbjct: 421 QLHTLPPQVGKLTHLKWLKVKNNPLQTLPGELGQVASIKHLDLSNCWLHTLPPEVGTLTQ 480

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L+RL + +N L +LP  +  +TN+  L +    L ++P E+GTL  L  L L  N  L  
Sbjct: 481 LERLKVANNPLQTLPGELWKVTNIKRLDLSSCWLDTLPPEVGTLTQLEWLSLQGNP-LQM 539

Query: 534 IPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQG 577
           +P ++   + ++ ++L  C L  +P E+   G    + +L +QG
Sbjct: 540 LPKQIGQLTAIKHLNLSFCQLHTLPPEM---GTLKQLEWLSLQG 580


>gi|418707316|ref|ZP_13268142.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772363|gb|EKR47551.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 424

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/387 (35%), Positives = 218/387 (56%), Gaps = 6/387 (1%)

Query: 145 YVTNLTCLGLA---ENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
           ++ NL+C   A     +   L  +L N   +RVLDL   KL  LP  + +L +L++L L 
Sbjct: 19  FLMNLSCEIQACEEPGTYQDLTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLS 78

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N++  +  +I+ L NL ML +R N++  LP E+G+L+NL  L L++N L   PKEIG  
Sbjct: 79  DNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKL 138

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L  L+L  N++  IP  +  L  L  L L  N+L ++P+ + K   L    +    + 
Sbjct: 139 QKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIK 198

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
           +LP  +   L  +  + L +N+ T  P     +   + S+  ++NQ+  +P  I  + +N
Sbjct: 199 TLPQEI-EKLQKLQWLYLHKNQLTTLPQE-IEKLQKLESLGLDNNQLTTLPQEI-GQLQN 255

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           L  + + +N LT++P ++G    L +L L +NQ++ + ++I  L NL++L L NN L  L
Sbjct: 256 LKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTIL 315

Query: 442 PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLS 501
           P  IG L+ L+ L L  N+L ++P EIG L+ LQ L L +NQL ++P+ IG L NL  L 
Sbjct: 316 PKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELY 375

Query: 502 VGENNLQSIPEEIGTLENLHTLYLNDN 528
           +  N L +IP+EIG L+NL TLYL +N
Sbjct: 376 LSNNQLITIPKEIGQLQNLQTLYLRNN 402



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 131/347 (37%), Positives = 194/347 (55%), Gaps = 8/347 (2%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L + + K++ LP ++G+LKNL  LDL+ N L  LPKEI     L  LDL+ N+L  
Sbjct: 48  DVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTI 107

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L NL  L LS N+L + P+ + K   L   N+    + ++P  +   L  + +
Sbjct: 108 LPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEI-EKLQKLQS 166

Query: 337 ITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
           + L  N+ T  P   G   +   +Y     +NQI  +P  I  + + L  + +  N LT+
Sbjct: 167 LYLPNNQLTTLPQEIGKLQKLQWLY---LSYNQIKTLPQEI-EKLQKLQWLYLHKNQLTT 222

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP ++     L  L L  NQ++ L ++I  L NL+VL L+NN L  +P  IG+L+ L+ L
Sbjct: 223 LPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDL 282

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            L  N+L ++P EIG L+ LQ L L +NQL  LP+ IG L NL  L +  N L +IP+EI
Sbjct: 283 YLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEI 342

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           G L+NL  LYL++N  L  IP E+    NLQ + L N  L  IP EI
Sbjct: 343 GQLQNLQELYLSNNQ-LTTIPKEIGQLQNLQELYLSNNQLITIPKEI 388



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 124/352 (35%), Positives = 198/352 (56%), Gaps = 7/352 (1%)

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           KL +LP +IG + NL  L L++N L  LP  +  L+ L++LDLR N+L  LP  + KL +
Sbjct: 58  KLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQN 117

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L+ LYL  N++ T   +I  L  L  L++  N+I+ +P E+ +L+ L +L L +N L  L
Sbjct: 118 LQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTL 177

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P+EIG    L  L L +N++  +P  +  L  L  L L  N+L ++P+ + K   L    
Sbjct: 178 PQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLG 237

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIP 372
           ++   L++LP  +   L ++  + L+ N+ T  P   G       +Y ++   NQ+  IP
Sbjct: 238 LDNNQLTTLPQEI-GQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVS---NQLTTIP 293

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + +NL  +++ +N LT LP ++G    L EL L  NQ++ + ++I  L NL+ L 
Sbjct: 294 KEI-GQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELY 352

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           LSNN L  +P  IG L+ L+ L L  N+L ++P EIG L+ LQ L L++NQ 
Sbjct: 353 LSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQF 404



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/336 (32%), Positives = 179/336 (53%), Gaps = 26/336 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  + KL +L+ELYL  N+L + P +IG +  L  L L+ N + 
Sbjct: 93  KNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIK 152

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++P  +  LQ+L+ L L +N+L  LP  + KL  L+ LYL +N+IKT+  +I+ L  L  
Sbjct: 153 TIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQW 212

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+ +L+ L +L L +N L  LP+EIG    L  L L +N+L  IP  
Sbjct: 213 LYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQE 272

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G+L NL  L L  N+L ++P+ + +  +L   ++    L+ LP   +  L ++  + LS
Sbjct: 273 IGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKE-IGKLQNLQELYLS 331

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL ++ + +N LT++P ++G
Sbjct: 332 NNQLTTIPKE-------------------------IGQLQNLQELYLSNNQLTTIPKEIG 366

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
               L EL L  NQ+  + ++I  L NL+ L L NN
Sbjct: 367 QLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 402



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/240 (36%), Positives = 139/240 (57%), Gaps = 1/240 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L  + +T LP  + KL  L+ LYL  N++ +LP +I  +  L  L L +N LT+LP  
Sbjct: 167 LYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQE 226

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L  L L +N+L  LP  + +L +LK+L+L  N++ T+  +I +L NL  L +  
Sbjct: 227 IEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVS 286

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  +P E+G+L+NL  LDL +N L  LPKEIG    L  L L +N+L  IP  +G L 
Sbjct: 287 NQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQ 346

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L LS N+L ++P+ + +  +L E  +    L ++P   +  L ++  + L  N+F+
Sbjct: 347 NLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKE-IGQLQNLQTLYLRNNQFS 405



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 92/151 (60%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L+ + +T +P  +  L +L++LYL  N+L ++P +IG + NL  L L  N LT
Sbjct: 254 QNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLT 313

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L L +N+L  +P  + +L +L+ LYL  N++ T+  +I  L NL  
Sbjct: 314 ILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQE 373

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHL 251
           L + +N++  +P E+G+L+NL TL L +N  
Sbjct: 374 LYLSNNQLITIPKEIGQLQNLQTLYLRNNQF 404


>gi|124004060|ref|ZP_01688907.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123990639|gb|EAY30119.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 577

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 153/460 (33%), Positives = 229/460 (49%), Gaps = 6/460 (1%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS + +T  P S  +L +LE LYL   +L + P   G + NL  L L+   L +
Sbjct: 112 NLEYLDLSGAQLTTFPESFSELVNLERLYLSSTQLVTFPESFGKLVNLQHLYLSSTQLIT 171

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP S   L  L  L L + +L  LP    KL +L+ L L   ++ T+      L NL  L
Sbjct: 172 LPKSFDKLVNLERLYLSNTQLITLPESFDKLVNLEYLDLSGTQLTTLPESFDKLVNLEYL 231

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +   ++ +LP   GEL NL  L L+   L +LP+  G    L  L L + +L ++P+  
Sbjct: 232 DLSGTQLTDLPESFGELVNLQDLYLSDTQLTDLPESFGELVNLQRLYLSNTQLTDLPESF 291

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L+NL  L LS  +L  +PE+  K V+L   N+    L++LP+     L ++  + LS 
Sbjct: 292 GELVNLQDLYLSNTQLTDLPESFDKLVNLQRLNLSSTQLTALPES-FGELVNLQRLYLSN 350

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
            + TA P     +  ++  +   + Q+  +P   F +  NL  + + D  LT+LP     
Sbjct: 351 TQLTALPESFD-KLVNLQDLYLSNIQLTALPES-FDKLVNLQHLYLSDTQLTALPESFDK 408

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
            V L  L L   Q++ L E    LVNL+ L LS+  L  LP S G L  L+ L+L   +L
Sbjct: 409 LVNLQHLYLSDTQLTALPESFGELVNLQHLNLSSTQLTALPESFGELVNLQHLNLSSTQL 468

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            +LP   G L  LQ L L + QL +LP++ G L NL  L +      ++PE    L NL 
Sbjct: 469 TTLPESFGELVNLQNLDLSNTQLTTLPKSFGELVNLQNLDLSNTQFTTLPESFDELVNLK 528

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           TL L++N  L ++       S LQ + L+  PL++  SEI
Sbjct: 529 TLDLSNNQ-LRSLNLCEKFVSRLQELQLEGNPLAE--SEI 565



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 149/457 (32%), Positives = 217/457 (47%), Gaps = 27/457 (5%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS + +T LP S  KL +LE L L G +L + P     + NL  L L+   L +
Sbjct: 89  NLGGLDLSHNQLTTLPESFGKLVNLEYLDLSGAQLTTFPESFSELVNLERLYLSSTQLVT 148

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
            P+S   L  L+ L L   +L  LP    KL +L+ LYL   ++ T+      L NL  L
Sbjct: 149 FPESFGKLVNLQHLYLSSTQLITLPKSFDKLVNLERLYLSNTQLITLPESFDKLVNLEYL 208

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +   ++  LP    +L NL  LDL+   L +LP+  G    L  L L   +L ++P+  
Sbjct: 209 DLSGTQLTTLPESFDKLVNLEYLDLSGTQLTDLPESFGELVNLQDLYLSDTQLTDLPESF 268

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L+NL RL LS  +L  +PE+  + V+L +  +    L+ LP+     L ++  + LS 
Sbjct: 269 GELVNLQRLYLSNTQLTDLPESFGELVNLQDLYLSNTQLTDLPES-FDKLVNLQRLNLSS 327

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
            + TA P                           F    NL ++ + +  LT+LP     
Sbjct: 328 TQLTALPES-------------------------FGELVNLQRLYLSNTQLTALPESFDK 362

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
            V L +L L   Q++ L E    LVNL+ L LS+  L  LP S   L  L+ L L + +L
Sbjct: 363 LVNLQDLYLSNIQLTALPESFDKLVNLQHLYLSDTQLTALPESFDKLVNLQHLYLSDTQL 422

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            +LP   G L  LQ L L S QL +LP + G L NL +L++    L ++PE  G L NL 
Sbjct: 423 TALPESFGELVNLQHLNLSSTQLTALPESFGELVNLQHLNLSSTQLTTLPESFGELVNLQ 482

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L L+ NT L  +P       NLQ + L N   + +P
Sbjct: 483 NLDLS-NTQLTTLPKSFGELVNLQNLDLSNTQFTTLP 518



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 94/204 (46%), Gaps = 3/204 (1%)

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
           + ++YS  F   +   I   +   A N S ++     L+ +P  +G    L  L+L  NQ
Sbjct: 42  YQNLYSALFPGGEAQGIEEQVV--ALNQSSIDASGQGLSVVPDGIGKLNNLGGLDLSHNQ 99

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           ++ L E    LVNLE L LS   L   P S   L  L+ L L   +L + P   G L  L
Sbjct: 100 LTTLPESFGKLVNLEYLDLSGAQLTTFPESFSELVNLERLYLSSTQLVTFPESFGKLVNL 159

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           Q L L S QL++LP++   L NL  L +    L ++PE    L NL  L L+  T L  +
Sbjct: 160 QHLYLSSTQLITLPKSFDKLVNLERLYLSNTQLITLPESFDKLVNLEYLDLS-GTQLTTL 218

Query: 535 PFELALCSNLQIMSLDNCPLSQIP 558
           P       NL+ + L    L+ +P
Sbjct: 219 PESFDKLVNLEYLDLSGTQLTDLP 242


>gi|418698174|ref|ZP_13259153.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762878|gb|EKR29037.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 430

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 145/405 (35%), Positives = 222/405 (54%), Gaps = 49/405 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L+LS  + T LP  +E+L +L++LYL+ N+L +LP +IG + NL  L L+ N LT 
Sbjct: 51  NVRILNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTI 110

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L+ L+ LDL  N+L  LP+ + KL +L+ LYL  N++ T              
Sbjct: 111 LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTT-------------- 156

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
                    LP E G+L NL  L+L+ N L  LP+EIG    L TL+L+ N+L  +   +
Sbjct: 157 ---------LPRESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI 207

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L LS N+L ++P  + K  +L+  N+    L+     LL  +  + N+    
Sbjct: 208 EQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAI----LLIEVGKLQNL---- 259

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                            +++N   NQ+  +P  I  + +NL  +N+  N LT+LP+++G 
Sbjct: 260 -----------------HTLNLSDNQLTTLPIEI-GKLQNLHTLNLSGNQLTTLPIEIGK 301

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L +LNL +NQ++ LS++I+ L NL+ L LS N L  LP  IG L+ L+ L+L  N+L
Sbjct: 302 LQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQL 361

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            +LP EIG L+ LQ L L  N+L++ P+ IG L NL  L +G +N
Sbjct: 362 TALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 406



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 140/365 (38%), Positives = 208/365 (56%), Gaps = 5/365 (1%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N   +R+L+L       LP  + +L +L+ LYL  NR+KT+  +I  L NL  L
Sbjct: 42  LTKALQNPLNVRILNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 101

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++  N++  LP E+G+L+NL  LDL  N L  LP EIG    L TL L  N+L  +P   
Sbjct: 102 NLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRES 161

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L LS N+L ++P+ + +  +L   N++   L++L   +   L ++  + LS 
Sbjct: 162 GKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI-EQLKNLQTLNLSD 220

Query: 342 NKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           N+ T  P   G  Q  +++++N   NQ+  +   +  + +NL  +N+ DN LT+LP+++G
Sbjct: 221 NQLTTLPIEIGKLQ--NLHTLNLSDNQLAILLIEV-GKLQNLHTLNLSDNQLTTLPIEIG 277

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  LNL  NQ++ L  +I  L NL+ L L +N L  L   I  L+ L+ L L  N+
Sbjct: 278 KLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNR 337

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L  LP EIG L+ LQ L L +NQL +LP  IG L NL  LS+ +N L + P+EIG L+NL
Sbjct: 338 LVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNL 397

Query: 521 HTLYL 525
            TLYL
Sbjct: 398 QTLYL 402



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 138/368 (37%), Positives = 197/368 (53%), Gaps = 27/368 (7%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           +++IL L      T+  +I+ L NL  L + DN+++ LP E+G+LKNL  L+L+ N L  
Sbjct: 51  NVRILNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTI 110

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LPKEIG    L  LDL  N L  +P  +G L NL  L LS N+L ++P    K  +L E 
Sbjct: 111 LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQEL 170

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           N+    L++LP  +                          Q  ++ ++N + NQ+  + +
Sbjct: 171 NLSDNQLTTLPQEI-------------------------GQLQNLQTLNLKSNQLTTL-F 204

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
               + KNL  +N+ DN LT+LP+++G    L  LNL  NQ++ L  ++  L NL  L L
Sbjct: 205 KEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNL 264

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           S+N L  LP  IG L+ L  L+L  N+L +LP EIG L+ LQ L L SNQL +L + I  
Sbjct: 265 SDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQ 324

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L NL  LS+  N L  +P+EIG L+NL  L L +N  L  +P E+    NLQ +SL    
Sbjct: 325 LKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQ-LTALPIEIGQLQNLQTLSLYKNR 383

Query: 554 LSQIPSEI 561
           L   P EI
Sbjct: 384 LMTFPKEI 391



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 110/317 (34%), Positives = 179/317 (56%), Gaps = 4/317 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS + +T LP  + KL +L+ L LY N+L  LP +IG + NL  L L+ N LT
Sbjct: 96  KNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLT 155

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP     L  L+ L+L  N+L  LP  + +L +L+ L L+ N++ T+  +I+ L NL  
Sbjct: 156 TLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQT 215

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++ DN++  LP E+G+L+NL TL+L+ N L  L  E+G    L TL+L  N+L  +P  
Sbjct: 216 LNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIE 275

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LS N+L ++P  + K  +L + N+    L++L    +  L ++  ++LS
Sbjct: 276 IGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKE-IEQLKNLQTLSLS 334

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P     Q  ++  +N  +NQ+  +P  I  + +NL  +++  N L + P ++G
Sbjct: 335 YNRLVILPK-EIGQLQNLQELNLWNNQLTALPIEI-GQLQNLQTLSLYKNRLMTFPKEIG 392

Query: 401 TWVGLTELNLGT-NQIS 416
               L  L LG  NQ S
Sbjct: 393 QLKNLQTLYLGGHNQFS 409



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 96/272 (35%), Positives = 150/272 (55%), Gaps = 14/272 (5%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L LS + +T LP    KL +L+EL L  N+L +LP +IG + NL  L L  N 
Sbjct: 140 KLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 199

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+L   +  L+ L+ L+L  N+L  LP+ + KL +L  L L  N++  +  ++  L NL
Sbjct: 200 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNL 259

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++ DN++  LP E+G+L+NL TL+L+ N L  LP EIG    L  L+L  N+L  + 
Sbjct: 260 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLS 319

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +  L NL  L LSYNRL  +P+ + +  +L E N+    L++LP   +  L ++  ++
Sbjct: 320 KEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE-IGQLQNLQTLS 378

Query: 339 LSRNKFTAYPS-------------GGPTQFTS 357
           L +N+   +P              GG  QF+S
Sbjct: 379 LYKNRLMTFPKEIGQLKNLQTLYLGGHNQFSS 410



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/311 (34%), Positives = 165/311 (53%), Gaps = 8/311 (2%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  L+L       +P  +  L NL +L L  NRL+++P+ + +  +L E
Sbjct: 41  DLTKALQNPLNVRILNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQE 100

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP--SGGPTQFTSVYSINFEHNQIDK 370
            N+    L+ LP   +  L ++  + L  N+ T  P   G      ++Y      NQ+  
Sbjct: 101 LNLSSNQLTILPKE-IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLY---LSSNQLTT 156

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           +P     +  NL ++N+ DN LT+LP ++G    L  LNL +NQ++ L ++I+ L NL+ 
Sbjct: 157 LPRE-SGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQT 215

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA 490
           L LS+N L  LP  IG L+ L  L+L +N+L  L  E+G L+ L  L L  NQL +LP  
Sbjct: 216 LNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIE 275

Query: 491 IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLD 550
           IG L NL  L++  N L ++P EIG L+NL  L L+ N  L  +  E+    NLQ +SL 
Sbjct: 276 IGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQ-LTTLSKEIEQLKNLQTLSLS 334

Query: 551 NCPLSQIPSEI 561
              L  +P EI
Sbjct: 335 YNRLVILPKEI 345



 Score = 42.0 bits (97), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
           + L +A+ +  N+  L++   N  ++P+EI  L+NL  LYL DN  L  +P E+    NL
Sbjct: 40  MDLTKALQNPLNVRILNLSGQNFTTLPKEIEQLKNLQKLYLFDNR-LKTLPKEIGQLKNL 98

Query: 545 QIMSLDNCPLSQIPSEI 561
           Q ++L +  L+ +P EI
Sbjct: 99  QELNLSSNQLTILPKEI 115


>gi|421110777|ref|ZP_15571268.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803874|gb|EKS10001.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 390

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/356 (37%), Positives = 205/356 (57%), Gaps = 8/356 (2%)

Query: 179 HNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGEL 238
           ++KLNE    +   T +++LYL   ++  +  +I  L NL  L++ +NK+  LP E+G L
Sbjct: 26  YSKLNE---ALQNPTQVRVLYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQEIGNL 82

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           + L  LDL  N +  LPKEIG    L  L+L  N+L  +P  +GNL +L RL L  N+  
Sbjct: 83  QYLQKLDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFT 142

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP-SGGPTQFTS 357
           ++PE + K  +L E       L++LP  +  +L ++  + L+ N+ TA P   G  Q  +
Sbjct: 143 ALPEEIGKLQNLQEMESSKNQLTTLPKEI-GNLQNLQELYLNENQLTALPIEIGNLQ--N 199

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +  +    NQ+  +P  I    +NL K+ +  N LT+LP+++G    L  LNL  NQ++ 
Sbjct: 200 LQKLVLNRNQLTALPIEI-GNLQNLQKLVLNRNQLTALPIEIGNLQNLQGLNLDKNQLTT 258

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L ++I+ L NL+ L L NN L  LP  IGNL+KLK L L +N+L ++P EIG L+ L+ L
Sbjct: 259 LPKEIRKLQNLQGLHLGNNKLTALPIEIGNLQKLKWLGLNKNQLTTIPKEIGNLQNLKEL 318

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
            L SNQL ++P+ I +L  L  L +  N L ++P+EIG L+NL  LYL  N  L N
Sbjct: 319 NLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGNLQNLQRLYLGGNPSLMN 374



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 140/376 (37%), Positives = 213/376 (56%), Gaps = 28/376 (7%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L     + L  +++  T +  LYL G KL +LP +IG + NL  L L EN LT+LP  + 
Sbjct: 21  LDAEDYSKLNEALQNPTQVRVLYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQEIG 80

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
           NLQ L+ LDL  NK+  LP  + +L SL+ L L FN++ T+  +I  L +L  L +  N+
Sbjct: 81  NLQYLQKLDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQ 140

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
              LP E+G+L+NL  ++ + N L  LPKEIGN   L  L L  N+L  +P  +GNL NL
Sbjct: 141 FTALPEEIGKLQNLQEMESSKNQLTTLPKEIGNLQNLQELYLNENQLTALPIEIGNLQNL 200

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            +L L+ N+L ++P             +E           + +L ++  + L+RN+ TA 
Sbjct: 201 QKLVLNRNQLTALP-------------IE-----------IGNLQNLQKLVLNRNQLTAL 236

Query: 348 P-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
           P   G  Q  ++  +N + NQ+  +P  I  + +NL  +++ +N LT+LP+++G    L 
Sbjct: 237 PIEIGNLQ--NLQGLNLDKNQLTTLPKEI-RKLQNLQGLHLGNNKLTALPIEIGNLQKLK 293

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L L  NQ++ + ++I NL NL+ L LS+N L  +P  I NL+KL+ LDL  N+L +LP 
Sbjct: 294 WLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPK 353

Query: 467 EIGFLKELQRLILQSN 482
           EIG L+ LQRL L  N
Sbjct: 354 EIGNLQNLQRLYLGGN 369



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/371 (34%), Positives = 201/371 (54%), Gaps = 37/371 (9%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
           + + +L +   K+  LP E+G+L+NL  L+L  N L  LP+EIGN   L  LDL  N++ 
Sbjct: 37  TQVRVLYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQEIGNLQYLQKLDLGFNKIT 96

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            +P  +G L +L  L LS+N+L ++P+ +    HL                         
Sbjct: 97  VLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKR----------------------- 133

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + L  N+FTA P     +  ++  +    NQ+  +P  I    +NL ++ + +N LT+L
Sbjct: 134 -LFLGLNQFTALPEE-IGKLQNLQEMESSKNQLTTLPKEI-GNLQNLQELYLNENQLTAL 190

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P+++G    L +L L  NQ++ L  +I NL NL+ LVL+ N L  LP  IGNL+ L+ L+
Sbjct: 191 PIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQGLN 250

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L++N+L +LP EI  L+ LQ L L +N+L +LP  IG+L  L +L + +N L +IP+EIG
Sbjct: 251 LDKNQLTTLPKEIRKLQNLQGLHLGNNKLTALPIEIGNLQKLKWLGLNKNQLTTIPKEIG 310

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI----------VVGG 565
            L+NL  L L+ N  L  IP E+     L+ + L N  L+ +P EI          + G 
Sbjct: 311 NLQNLKELNLSSNQ-LTTIPKEIENLQKLETLDLYNNQLTTLPKEIGNLQNLQRLYLGGN 369

Query: 566 PSLIIRYLKMQ 576
           PSL+ +  K+Q
Sbjct: 370 PSLMNQKEKIQ 380



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 126/354 (35%), Positives = 183/354 (51%), Gaps = 26/354 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L+   +T LP  + KL +L+EL L+ NKL +LP +IG +  L  L L  N +T LP  
Sbjct: 42  LYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQEIGNLQYLQKLDLGFNKITVLPKE 101

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ L+L  N+L  LP  +  L  LK L+L  N+   +  +I  L NL  +    
Sbjct: 102 IGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQEMESSK 161

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G L+NL  L L  N L  LP EIGN   L  L L  N+L  +P  +GNL 
Sbjct: 162 NQLTTLPKEIGNLQNLQELYLNENQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQ 221

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL +L L+ N+L ++P  +    +L   N++   L++LP   +  L ++  + L  NK T
Sbjct: 222 NLQKLVLNRNQLTALPIEIGNLQNLQGLNLDKNQLTTLPKE-IRKLQNLQGLHLGNNKLT 280

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           A P                      I  G   + K L    +  N LT++P ++G    L
Sbjct: 281 ALP----------------------IEIGNLQKLKWLG---LNKNQLTTIPKEIGNLQNL 315

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
            ELNL +NQ++ + ++I+NL  LE L L NN L  LP  IGNL+ L+ L L  N
Sbjct: 316 KELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGNLQNLQRLYLGGN 369



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/330 (33%), Positives = 179/330 (54%), Gaps = 6/330 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L+L ++ +T LP  +  L +L++L L  NK+  LP +IG + +L  L L+ N 
Sbjct: 58  KLQNLQELNLWENKLTTLPQEIGNLQYLQKLDLGFNKITVLPKEIGQLQSLQELNLSFNQ 117

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L +LP  + NLQ L+ L L  N+   LP  + KL +L+ +    N++ T+  +I  L NL
Sbjct: 118 LATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQEMESSKNQLTTLPKEIGNLQNL 177

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L + +N++  LP E+G L+NL  L L  N L  LP EIGN   L  L L  N+L  +P
Sbjct: 178 QELYLNENQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQKLVLNRNQLTALP 237

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +GNL NL  L L  N+L ++P+ + K  +L   ++    L++LP   + +L  +  + 
Sbjct: 238 IEIGNLQNLQGLNLDKNQLTTLPKEIRKLQNLQGLHLGNNKLTALPIE-IGNLQKLKWLG 296

Query: 339 LSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
           L++N+ T  P   G  Q  ++  +N   NQ+  IP  I +  K L  +++ +N LT+LP 
Sbjct: 297 LNKNQLTTIPKEIGNLQ--NLKELNLSSNQLTTIPKEIENLQK-LETLDLYNNQLTTLPK 353

Query: 398 DLGTWVGLTELNLGTN-QISKLSEDIQNLV 426
           ++G    L  L LG N  +    E IQ L+
Sbjct: 354 EIGNLQNLQRLYLGGNPSLMNQKEKIQKLL 383



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 87/146 (59%), Gaps = 1/146 (0%)

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           SKL+E +QN   + VL L+   L  LP  IG L+ L+ L+L ENKL +LP EIG L+ LQ
Sbjct: 27  SKLNEALQNPTQVRVLYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQEIGNLQYLQ 86

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
           +L L  N++  LP+ IG L +L  L++  N L ++P+EIG L++L  L+L  N     +P
Sbjct: 87  KLDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQ-FTALP 145

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEI 561
            E+    NLQ M      L+ +P EI
Sbjct: 146 EEIGKLQNLQEMESSKNQLTTLPKEI 171


>gi|417761876|ref|ZP_12409877.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776956|ref|ZP_12424785.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418673273|ref|ZP_13234595.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942287|gb|EKN87903.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573245|gb|EKQ36298.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579766|gb|EKQ47605.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 374

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/355 (36%), Positives = 206/355 (58%), Gaps = 3/355 (0%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           +LDL  N+L  LP  + +L +L++L L  N+I  +  +I+ L NL ML +R N++  LP 
Sbjct: 1   MLDLSDNQLIILPKEIRQLKNLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPK 60

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+G+L+NL  L L++N L   PKEIG    L  L+L  N++  IP  +  L  L  L L 
Sbjct: 61  EIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLP 120

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
            N+L ++P+ + K   L   N+    + +LP  +   L  +  + L +N+ T  P     
Sbjct: 121 NNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEI-EKLQKLQWLYLHKNQLTTLPQE-IE 178

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           +   + S+  ++NQ+  +P  I  + +NL  + + +N LT+LP ++G    L +L L +N
Sbjct: 179 KLQKLESLGLDNNQLTTLPQEI-GQLQNLKVLFLNNNQLTTLPQEIGHLQNLQDLYLVSN 237

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           Q++ + ++I  L NL++L L NN L  LP  IG L+ L+ L L  N+L ++P EIG L+ 
Sbjct: 238 QLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQWLYLSNNQLTTIPKEIGQLQN 297

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           LQ L L +NQL ++P+ IG L NL  L +  N L +IP+EIG L+NL TLYL +N
Sbjct: 298 LQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 352



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 134/343 (39%), Positives = 193/343 (56%), Gaps = 6/343 (1%)

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
           ML + DN++  LP E+ +LKNL  LDL+ N +  LPKEI     L  LDL+ N+L  +P 
Sbjct: 1   MLDLSDNQLIILPKEIRQLKNLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPK 60

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +G L NL  L LS N+L + P+ + K   L   N+    + ++P  +   L  + ++ L
Sbjct: 61  EIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEI-EKLQKLQSLYL 119

Query: 340 SRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
             N+ T  P   G  Q   +  +N  +NQI  +P  I  + + L  + +  N LT+LP +
Sbjct: 120 PNNQLTTLPQEIGKLQ--KLQWLNLSYNQIKTLPQEI-EKLQKLQWLYLHKNQLTTLPQE 176

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +     L  L L  NQ++ L ++I  L NL+VL L+NN L  LP  IG+L+ L+ L L  
Sbjct: 177 IEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTLPQEIGHLQNLQDLYLVS 236

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L ++P EIG L+ LQ L L +NQL  LP+ IG L NL +L +  N L +IP+EIG L+
Sbjct: 237 NQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQWLYLSNNQLTTIPKEIGQLQ 296

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           NL  LYL++N  L  IP E+    NLQ + L N  L  IP EI
Sbjct: 297 NLQELYLSNNQ-LTTIPKEIGQLQNLQELYLSNNQLITIPKEI 338



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 123/358 (34%), Positives = 199/358 (55%), Gaps = 7/358 (1%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L  N+L  LP +I  + NL  L L++N +  LP  +  L+ L++LDLR N+L  LP  
Sbjct: 2   LDLSDNQLIILPKEIRQLKNLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPKE 61

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + KL +L+ LYL  N++ T   +I  L  L  L++  N+I+ +P E+ +L+ L +L L +
Sbjct: 62  IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPN 121

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L  LP+EIG    L  L+L +N++  +P  +  L  L  L L  N+L ++P+ + K  
Sbjct: 122 NQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQ 181

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHN 366
            L    ++   L++LP  +   L ++  + L+ N+ T  P   G       +Y ++   N
Sbjct: 182 KLESLGLDNNQLTTLPQEI-GQLQNLKVLFLNNNQLTTLPQEIGHLQNLQDLYLVS---N 237

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
           Q+  IP  I  + +NL  +++ +N LT LP ++G    L  L L  NQ++ + ++I  L 
Sbjct: 238 QLTTIPKEI-GQLQNLQMLDLGNNQLTILPKEIGKLQNLQWLYLSNNQLTTIPKEIGQLQ 296

Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           NL+ L LSNN L  +P  IG L+ L+ L L  N+L ++P EIG L+ LQ L L++NQ 
Sbjct: 297 NLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQF 354



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 181/344 (52%), Gaps = 28/344 (8%)

Query: 93  KEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCL 152
           KE  + K  N+  LDL  + +T LP  + KL +L+ELYL  N+L + P +IG +  L  L
Sbjct: 37  KEIRQLK--NLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWL 94

Query: 153 GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
            L+ N + ++P  +  LQ+L+ L L +N+L  LP  + KL  L+ L L +N+IKT+  +I
Sbjct: 95  NLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEI 154

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
           + L  L  L +  N++  LP E+ +L+ L +L L +N L  LP+EIG    L  L L +N
Sbjct: 155 EKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNN 214

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
           +L  +P  +G+L NL  L L  N+L ++P+ + +  +L   ++    L+ LP   +  L 
Sbjct: 215 QLTTLPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKE-IGKLQ 273

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
           ++  + LS N+ T  P                             + +NL ++ + +N L
Sbjct: 274 NLQWLYLSNNQLTTIPKE-------------------------IGQLQNLQELYLSNNQL 308

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
           T++P ++G    L EL L  NQ+  + ++I  L NL+ L L NN
Sbjct: 309 TTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 352



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 88/218 (40%), Positives = 132/218 (60%), Gaps = 7/218 (3%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS + I  LP  +EKL  L+ LYL+ N+L +LP +I  +  L  LGL  N LT+LP  
Sbjct: 140 LNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQE 199

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+VL L +N+L  LP  +  L +L+ LYL  N++ T+  +I  L NL ML + +
Sbjct: 200 IGQLQNLKVLFLNNNQLTTLPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGN 259

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L+NL  L L++N L  +PKEIG    L  L L +N+L  IP  +G L 
Sbjct: 260 NQLTILPKEIGKLQNLQWLYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQ 319

Query: 286 NLTRLRLSYNRLESVPETLSKCVHL-------NEFNVE 316
           NL  L LS N+L ++P+ + +  +L       N+F++E
Sbjct: 320 NLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSIE 357



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 92/151 (60%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L+ + +T LP  +  L +L++LYL  N+L ++P +IG + NL  L L  N LT
Sbjct: 204 QNLKVLFLNNNQLTTLPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLT 263

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L L +N+L  +P  + +L +L+ LYL  N++ T+  +I  L NL  
Sbjct: 264 ILPKEIGKLQNLQWLYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQE 323

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHL 251
           L + +N++  +P E+G+L+NL TL L +N  
Sbjct: 324 LYLSNNQLITIPKEIGQLQNLQTLYLRNNQF 354


>gi|410451731|ref|ZP_11305733.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014497|gb|EKO76627.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 394

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 134/374 (35%), Positives = 202/374 (54%), Gaps = 26/374 (6%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L     + L  +++  T +  LYL   KL +LP +IG + NL  L L EN LT++P  + 
Sbjct: 21  LDAEDYSKLNEALQNPTQVRVLYLNAKKLIALPKEIGNLQNLQELNLWENQLTTIPQEIG 80

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
           NLQ L+ LDL  NK+  LP  + KL SL+ L L FN++ T+  +I  L +L  L +  N+
Sbjct: 81  NLQHLQKLDLGFNKITVLPNEIGKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQ 140

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           +  LP E+G+L+NL  L L  N L  +P+EIGN   L  L L HN L  +P  +G L NL
Sbjct: 141 LTTLPKEIGKLQNLQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNL 200

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            +L L  N+L ++P+ + K  +L    + G   ++LP   + +L ++  + L+RN+ T  
Sbjct: 201 QKLILDKNQLTTLPQEIGKLQNLRGLALTGNQFTTLPKE-IGNLQNLQGLALTRNQLTTL 259

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
           P                               + L ++ +  N LT+LP ++G    L +
Sbjct: 260 PKE-------------------------IGNLQKLQELRLDHNQLTTLPKEIGNLQNLKD 294

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           LNL +NQ++ + ++I NL NLE L LS+N L  LP  I NL+ L+ LDL  N L S P E
Sbjct: 295 LNLRSNQLTTIPQEIGNLQNLEYLNLSSNQLTALPKEIENLQSLESLDLSGNPLTSFPEE 354

Query: 468 IGFLKELQRLILQS 481
           IG L+ L+RL L++
Sbjct: 355 IGKLQHLKRLRLEN 368



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/340 (35%), Positives = 198/340 (58%), Gaps = 8/340 (2%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
           + + +L +   K+  LP E+G L+NL  L+L  N L  +P+EIGN   L  LDL  N++ 
Sbjct: 37  TQVRVLYLNAKKLIALPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQKLDLGFNKIT 96

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            +P+ +G L +L  L LS+N+L ++P+ + +  HL   ++    L++LP  +   L ++ 
Sbjct: 97  VLPNEIGKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTLPKEI-GKLQNLQ 155

Query: 336 NITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
            + L  N+ T  P   G       +Y +   HN +  +P  +  + +NL K+ +  N LT
Sbjct: 156 ELHLWENQLTTIPQEIGNLQNLKELYLM---HNNLTTLPKEV-GQLQNLQKLILDKNQLT 211

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP ++G    L  L L  NQ + L ++I NL NL+ L L+ N L  LP  IGNL+KL+ 
Sbjct: 212 TLPQEIGKLQNLRGLALTGNQFTTLPKEIGNLQNLQGLALTRNQLTTLPKEIGNLQKLQE 271

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L L+ N+L +LP EIG L+ L+ L L+SNQL ++P+ IG+L NL YL++  N L ++P+E
Sbjct: 272 LRLDHNQLTTLPKEIGNLQNLKDLNLRSNQLTTIPQEIGNLQNLEYLNLSSNQLTALPKE 331

Query: 514 IGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           I  L++L +L L+ N  L + P E+    +L+ + L+N P
Sbjct: 332 IENLQSLESLDLSGNP-LTSFPEEIGKLQHLKRLRLENIP 370



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/353 (34%), Positives = 193/353 (54%), Gaps = 28/353 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L+   +  LP  +  L +L+EL L+ N+L ++P +IG + +L  L L  N +T LP+ 
Sbjct: 42  LYLNAKKLIALPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQKLDLGFNKITVLPNE 101

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ L+L  N+L  +P  +++L  L+ L+L +N++ T+  +I  L NL  L + +
Sbjct: 102 IGKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTLPKEIGKLQNLQELHLWE 161

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  +P E+G L+NL  L L HN+L  LPKE+G    L  L L  N+L  +P  +G L 
Sbjct: 162 NQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLILDKNQLTTLPQEIGKLQ 221

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L+ N+  ++P+ +      N  N++G A                   L+RN+ T
Sbjct: 222 NLRGLALTGNQFTTLPKEIG-----NLQNLQGLA-------------------LTRNQLT 257

Query: 346 AYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
             P   G  Q   +  +  +HNQ+  +P  I    +NL  +N++ N LT++P ++G    
Sbjct: 258 TLPKEIGNLQ--KLQELRLDHNQLTTLPKEI-GNLQNLKDLNLRSNQLTTIPQEIGNLQN 314

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           L  LNL +NQ++ L ++I+NL +LE L LS N L   P  IG L+ LK L LE
Sbjct: 315 LEYLNLSSNQLTALPKEIENLQSLESLDLSGNPLTSFPEEIGKLQHLKRLRLE 367



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/308 (33%), Positives = 165/308 (53%), Gaps = 27/308 (8%)

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LPKEIGN   L  L+L  N+L  IP  +GNL +L +L L +N++  +P  + K   L E 
Sbjct: 52  LPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQKLDLGFNKITVLPNEIGKLQSLQEL 111

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           N+    L+++P  +                          +   + +++  +NQ+  +P 
Sbjct: 112 NLSFNQLTTIPKEIW-------------------------ELQHLQTLHLVYNQLTTLPK 146

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
            I  + +NL ++++ +N LT++P ++G    L EL L  N ++ L +++  L NL+ L+L
Sbjct: 147 EI-GKLQNLQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLIL 205

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
             N L  LP  IG L+ L+ L L  N+  +LP EIG L+ LQ L L  NQL +LP+ IG+
Sbjct: 206 DKNQLTTLPQEIGKLQNLRGLALTGNQFTTLPKEIGNLQNLQGLALTRNQLTTLPKEIGN 265

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L  L  L +  N L ++P+EIG L+NL  L L  N  L  IP E+    NL+ ++L +  
Sbjct: 266 LQKLQELRLDHNQLTTLPKEIGNLQNLKDLNLRSNQ-LTTIPQEIGNLQNLEYLNLSSNQ 324

Query: 554 LSQIPSEI 561
           L+ +P EI
Sbjct: 325 LTALPKEI 332



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 159/291 (54%), Gaps = 4/291 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL  + IT LP  + KL  L+EL L  N+L ++P +I  + +L  L L  N LT+LP  
Sbjct: 88  LDLGFNKITVLPNEIGKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTLPKE 147

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ L L  N+L  +P  +  L +LK LYL  N + T+  ++  L NL  L +  
Sbjct: 148 IGKLQNLQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLILDK 207

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L+NL  L L  N    LPKEIGN   L  L L  N+L  +P  +GNL 
Sbjct: 208 NQLTTLPQEIGKLQNLRGLALTGNQFTTLPKEIGNLQNLQGLALTRNQLTTLPKEIGNLQ 267

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  LRL +N+L ++P+ +    +L + N+    L+++P   + +L ++  + LS N+ T
Sbjct: 268 KLQELRLDHNQLTTLPKEIGNLQNLKDLNLRSNQLTTIPQE-IGNLQNLEYLNLSSNQLT 326

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           A P        S+ S++   N +   P  I  + ++L ++ + +N+ T LP
Sbjct: 327 ALPKEIEN-LQSLESLDLSGNPLTSFPEEI-GKLQHLKRLRL-ENIPTLLP 374



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/218 (38%), Positives = 122/218 (55%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L L ++ +T +P  +  L +L+ELYL  N L +LP ++G + NL  L L +N 
Sbjct: 150 KLQNLQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLILDKNQ 209

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP  +  LQ LR L L  N+   LP  +  L +L+ L L  N++ T+  +I  L  L
Sbjct: 210 LTTLPQEIGKLQNLRGLALTGNQFTTLPKEIGNLQNLQGLALTRNQLTTLPKEIGNLQKL 269

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L +  N++  LP E+G L+NL  L+L  N L  +P+EIGN   L  L+L  N+L  +P
Sbjct: 270 QELRLDHNQLTTLPKEIGNLQNLKDLNLRSNQLTTIPQEIGNLQNLEYLNLSSNQLTALP 329

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE 316
             + NL +L  L LS N L S PE + K  HL    +E
Sbjct: 330 KEIENLQSLESLDLSGNPLTSFPEEIGKLQHLKRLRLE 367



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/170 (43%), Positives = 104/170 (61%), Gaps = 1/170 (0%)

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           L +LP ++G    L ELNL  NQ++ + ++I NL +L+ L L  N +  LP+ IG L+ L
Sbjct: 49  LIALPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQKLDLGFNKITVLPNEIGKLQSL 108

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           + L+L  N+L ++P EI  L+ LQ L L  NQL +LP+ IG L NL  L + EN L +IP
Sbjct: 109 QELNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTLPKEIGKLQNLQELHLWENQLTTIP 168

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +EIG L+NL  LYL  N  L  +P E+    NLQ + LD   L+ +P EI
Sbjct: 169 QEIGNLQNLKELYLMHNN-LTTLPKEVGQLQNLQKLILDKNQLTTLPQEI 217



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/146 (43%), Positives = 89/146 (60%), Gaps = 1/146 (0%)

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           SKL+E +QN   + VL L+   L  LP  IGNL+ L+ L+L EN+L ++P EIG L+ LQ
Sbjct: 27  SKLNEALQNPTQVRVLYLNAKKLIALPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQ 86

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
           +L L  N++  LP  IG L +L  L++  N L +IP+EI  L++L TL+L  N  L  +P
Sbjct: 87  KLDLGFNKITVLPNEIGKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQ-LTTLP 145

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEI 561
            E+    NLQ + L    L+ IP EI
Sbjct: 146 KEIGKLQNLQELHLWENQLTTIPQEI 171


>gi|398341370|ref|ZP_10526073.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 398

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 136/368 (36%), Positives = 207/368 (56%), Gaps = 26/368 (7%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L +++ N   +RVLDL   KL  LP  + +L +L+ LYL +N++KT+  +I  L NL +
Sbjct: 35  DLTEAIQNPLDVRVLDLSQQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRV 94

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+ +LK+L  L L++N L+ LPKEI     L  L L+ N+L  +P  
Sbjct: 95  LELIHNQLETLPNEIEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTE 154

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL RL+L  N+L ++PE + +  +L   N+    L++LP+ +   L ++  + L 
Sbjct: 155 IGQLKNLQRLQLWNNQLMTLPEEIGQLKNLQTLNLGYNQLTALPNEI-GQLQNLQELYLG 213

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ TA P                 N+I ++        + L ++++  N LT+LP ++G
Sbjct: 214 SNQLTALP-----------------NEIGQL--------QKLQELSLSTNRLTTLPNEIG 248

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L +L LG+NQ++ L  +I  L NL+ L L +N L  L   I  L+ LK LDL  N+
Sbjct: 249 QLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQ 308

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L + P EI  LK LQ L L SNQL +LP+ IG L NL    +  N L ++P+EIG L+NL
Sbjct: 309 LTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNL 368

Query: 521 HTLYLNDN 528
             LYL DN
Sbjct: 369 QELYLIDN 376



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/358 (34%), Positives = 195/358 (54%), Gaps = 26/358 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  +E+L +L+ LYL  N+L +LP +IG + NL  L L  N L +LP+ 
Sbjct: 49  LDLSQQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLETLPNE 108

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L +N+L  LP  + +L +L+ LYLR N++ T+  +I  L NL  L + +
Sbjct: 109 IEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLQLWN 168

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL TL+L +N L  LP EIG    L  L L  N+L  +P+ +G L 
Sbjct: 169 NQLMTLPEEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQELYLGSNQLTALPNEIGQLQ 228

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LS NRL ++P  + +  +L +  +    L+ LP+  +  L ++  + L  N+ T
Sbjct: 229 KLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNE-IGQLKNLQTLYLRSNRLT 287

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                                           + +NL  +++ +N LT+ P ++     L
Sbjct: 288 TLSKD-------------------------IEQLQNLKSLDLWNNQLTTFPKEIEQLKNL 322

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
             L+LG+NQ++ L ++I  L NL+V  L+NN L  LP  IG L+ L+ L L +N+L S
Sbjct: 323 QVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQLSS 380



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 128/345 (37%), Positives = 191/345 (55%), Gaps = 27/345 (7%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L +   K++ LP E+ +LKNL  L L++N L+ LPKEIG    L  L+L HN+L  
Sbjct: 45  DVRVLDLSQQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLET 104

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P+ +  L +L RL LSYN+L+++P+ + +  +L E  +    L++LP       T I  
Sbjct: 105 LPNEIEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLP-------TEIG- 156

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
                            Q  ++  +   +NQ+  +P  I  + KNL  +N+  N LT+LP
Sbjct: 157 -----------------QLKNLQRLQLWNNQLMTLPEEI-GQLKNLQTLNLGYNQLTALP 198

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L EL LG+NQ++ L  +I  L  L+ L LS N L  LP+ IG L+ L+ L L
Sbjct: 199 NEIGQLQNLQELYLGSNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYL 258

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+L  LPNEIG LK LQ L L+SN+L +L + I  L NL  L +  N L + P+EI  
Sbjct: 259 GSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQ 318

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+NL  L L  N  L  +P E+    NLQ+  L+N  L+ +P EI
Sbjct: 319 LKNLQVLDLGSNQ-LTTLPKEIGQLKNLQVFELNNNQLTTLPKEI 362



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/309 (34%), Positives = 162/309 (52%), Gaps = 27/309 (8%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L + I N   +  LDL   +L  +P+ +  L NL RL LSYN+L+++P+ + +  +L  
Sbjct: 35  DLTEAIQNPLDVRVLDLSQQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRV 94

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
             +    L +LP+ +                          Q   +  +   +NQ+  +P
Sbjct: 95  LELIHNQLETLPNEI-------------------------EQLKDLQRLYLSYNQLKTLP 129

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + +NL ++ ++DN LT+LP ++G    L  L L  NQ+  L E+I  L NL+ L 
Sbjct: 130 KEI-RQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLQLWNNQLMTLPEEIGQLKNLQTLN 188

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L  N L  LP+ IG L+ L+ L L  N+L +LPNEIG L++LQ L L +N+L +LP  IG
Sbjct: 189 LGYNQLTALPNEIGQLQNLQELYLGSNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIG 248

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L +G N L  +P EIG L+NL TLYL  N  L  +  ++    NL+ + L N 
Sbjct: 249 QLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNR-LTTLSKDIEQLQNLKSLDLWNN 307

Query: 553 PLSQIPSEI 561
            L+  P EI
Sbjct: 308 QLTTFPKEI 316



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 126/212 (59%), Gaps = 5/212 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + +T LP  + +L +L+ELYL  N+L +LP++IG +  L  L L+ N LT
Sbjct: 182 KNLQTLNLGYNQLTALPNEIGQLQNLQELYLGSNQLTALPNEIGQLQKLQELSLSTNRLT 241

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L L  N+L  LP  + +L +L+ LYLR NR+ T+  DI+ L NL  
Sbjct: 242 TLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKS 301

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++   P E+ +LKNL  LDL  N L  LPKEIG    L   +L +N+L  +P  
Sbjct: 302 LDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKE 361

Query: 281 LGNLINLTRLRLSYNRL-----ESVPETLSKC 307
           +G L NL  L L  N+L     E + + L KC
Sbjct: 362 IGQLQNLQELYLIDNQLSSEEKERIRKLLPKC 393



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 127/222 (57%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L  + +  LP  + +L +L+ L L  N+L +LP++IG + NL  L L  N LT
Sbjct: 159 KNLQRLQLWNNQLMTLPEEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQELYLGSNQLT 218

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ+L+ L L  N+L  LP  + +L +L+ LYL  N++  +  +I  L NL  
Sbjct: 219 ALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQT 278

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +R N++  L  ++ +L+NL +LDL +N L   PKEI     L  LDL  N+L  +P  
Sbjct: 279 LYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKE 338

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           +G L NL    L+ N+L ++P+ + +  +L E  +    LSS
Sbjct: 339 IGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQLSS 380



 Score = 39.7 bits (91), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
           + L  AI +  ++  L + +  L+++P EI  L+NL  LYL+ N  L  +P E+    NL
Sbjct: 34  MDLTEAIQNPLDVRVLDLSQQKLKTLPNEIEQLKNLQRLYLSYNQ-LKTLPKEIGQLQNL 92

Query: 545 QIMSLDNCPLSQIPSEI 561
           +++ L +  L  +P+EI
Sbjct: 93  RVLELIHNQLETLPNEI 109


>gi|456822986|gb|EMF71456.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 423

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 149/413 (36%), Positives = 224/413 (54%), Gaps = 29/413 (7%)

Query: 145 YVTNLTCLGLAE--NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           +  +L+C   AE   +   L  +L N   +RVL L   KL  LP  + +L +LK+L L  
Sbjct: 19  FFIHLSCEIQAEEPGTYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGH 78

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N++  +  +I  L NL +L +  N++  LP E+G+LKNL  L L +N L  LP EI    
Sbjct: 79  NQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLK 138

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  LDL +N+L  +P  +G L NL  L LSYN+L ++P+ + K  +L   ++    L+ 
Sbjct: 139 NLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTI 198

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LP  +                       G  Q  +++ ++  HNQ+  +P  I  + +NL
Sbjct: 199 LPQEI-----------------------GKLQ--NLHELDLSHNQLTILPKEI-GQLQNL 232

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
            +  + +N LT LP ++G    L EL LG NQ++ L ++I  L NL+  VL NN    LP
Sbjct: 233 QRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILP 292

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
             IG L+ L+ L L  N+L + P EIG L++LQ L L +NQL +LP  I  L NL  L++
Sbjct: 293 KEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNL 352

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            EN L++IP+EIG L+NL +L L++N  L  +P E+    NLQ ++L N   S
Sbjct: 353 SENQLKTIPQEIGQLQNLKSLDLSNNQ-LTTLPKEIEQLKNLQTLNLWNNQFS 404



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 138/381 (36%), Positives = 205/381 (53%), Gaps = 26/381 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS+  +T LP  +++L +L+ L L  N+L +LP +IG + NL  L L  N LT+LP  
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VL L +N+L  LP  + +L +L++L L  N++  +  +I  L NL  L +  
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSY 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L+NL  L L  + L  LP+EIG    L  LDL HN+L  +P  +G L 
Sbjct: 171 NQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQ 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL R  L  N+L  +P+ + K  +L+E  +    L+ LP   +  L ++    L  N+FT
Sbjct: 231 NLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKE-IGQLQNLQRFVLDNNQFT 289

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                             + +NL ++ +  N LT+ P ++G    L
Sbjct: 290 ILPKE-------------------------IGQLQNLQELYLSYNQLTTFPKEIGKLQKL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             LNL  NQ++ L E+I+ L NL+ L LS N LK +P  IG L+ LK LDL  N+L +LP
Sbjct: 325 QTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLP 384

Query: 466 NEIGFLKELQRLILQSNQLVS 486
            EI  LK LQ L L +NQ  S
Sbjct: 385 KEIEQLKNLQTLNLWNNQFSS 405



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 121/337 (35%), Positives = 200/337 (59%), Gaps = 5/337 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  + +L +L+ L LY N+L +LP +IG + NL  L L  N LT
Sbjct: 69  QNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLT 128

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L++LDL +N+L  LP  + +L +L+ LYL +N++ T+  +I  L NL +
Sbjct: 129 TLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQL 188

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+ ++++  LP E+G+L+NL  LDL+HN L  LPKEIG    L    L +N+L  +P  
Sbjct: 189 LSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKE 248

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L +N+L  +P+ + +  +L  F ++    + LP   +  L ++  + LS
Sbjct: 249 IGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKE-IGQLQNLQELYLS 307

Query: 341 RNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
            N+ T +P   G  Q   + ++N  +NQ+  +P  I  + KNL  +N+ +N L ++P ++
Sbjct: 308 YNQLTTFPKEIGKLQ--KLQTLNLWNNQLTTLPEEI-EQLKNLKTLNLSENQLKTIPQEI 364

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
           G    L  L+L  NQ++ L ++I+ L NL+ L L NN
Sbjct: 365 GQLQNLKSLDLSNNQLTTLPKEIEQLKNLQTLNLWNN 401



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/281 (35%), Positives = 153/281 (54%), Gaps = 4/281 (1%)

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           L N +++  L LS  +L ++P+ + +  +L   ++    L++LP  +   L ++  + L 
Sbjct: 42  LQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEI-GQLKNLQLLILY 100

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ TA P     Q  ++  +   +NQ+  +P  I  + KNL  +++ +N LT LP ++G
Sbjct: 101 YNQLTALPKE-IGQLKNLKVLFLNNNQLTTLPTEI-RQLKNLQMLDLGNNQLTILPKEIG 158

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L EL L  NQ++ L ++I  L NL++L L  + L  LP  IG L+ L  LDL  N+
Sbjct: 159 QLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQ 218

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L  LP EIG L+ LQR +L +NQL  LP+ IG L NL  L +G N L  +P+EIG L+NL
Sbjct: 219 LTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNL 278

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
               L DN     +P E+    NLQ + L    L+  P EI
Sbjct: 279 QRFVL-DNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEI 318



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 122/224 (54%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  L L +S +T LP  + KL +L EL L  N+L  LP +IG + NL    L  N 
Sbjct: 182 KLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQ 241

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT LP  +  LQ L  L L HN+L  LP  + +L +L+   L  N+   +  +I  L NL
Sbjct: 242 LTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNL 301

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L +  N++   P E+G+L+ L TL+L +N L  LP+EI     L TL+L  N+L  IP
Sbjct: 302 QELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIP 361

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
             +G L NL  L LS N+L ++P+ + +  +L   N+     SS
Sbjct: 362 QEIGQLQNLKSLDLSNNQLTTLPKEIEQLKNLQTLNLWNNQFSS 405



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 93/159 (58%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L L  + +T LP  + +L +L+   L  N+   LP +IG + NL  L L+ N 
Sbjct: 251 KLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQ 310

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+ P  +  LQ+L+ L+L +N+L  LP  + +L +LK L L  N++KT+  +I  L NL
Sbjct: 311 LTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNL 370

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
             L + +N++  LP E+ +LKNL TL+L +N      KE
Sbjct: 371 KSLDLSNNQLTTLPKEIEQLKNLQTLNLWNNQFSSQEKE 409


>gi|427722688|ref|YP_007069965.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
 gi|427354408|gb|AFY37131.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
          Length = 1183

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 145/469 (30%), Positives = 243/469 (51%), Gaps = 24/469 (5%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYL-YGNKLASLPSQIGYVTNLTCLGLA 155
           +   E    LDLS  ++  LPP++ KL  LE L L   N  A                  
Sbjct: 12  QAAAEEWTELDLSGMNLDALPPAIGKLAKLETLILGKWNGEAQ----------------- 54

Query: 156 ENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYL 215
           EN+L +LP     LQ+L+ L+   N L  +P+++ K   LK L L FN+IK +   +  L
Sbjct: 55  ENNLKTLPPETTQLQKLKRLEWPCNNLEAIPVIITKFPKLKQLNLSFNQIKEIPESLSAL 114

Query: 216 SNLSMLSMRDN-KIRELPPELGELKNLVTLDLAHNH-LEELPKEIGNCTMLVTLDLQHNE 273
            NL  L +  N +I+E+P  L  L NL  LDL+ NH ++E+P  +     L  L L  N 
Sbjct: 115 INLQQLDLSANHQIKEIPDSLSALINLQQLDLSANHQIKEIPDSLAALVNLQQLQLGGNP 174

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           +  IP +L  L++L +L L+   ++ +P++L+  V+L +  +    +  +PD  L++L++
Sbjct: 175 IKEIPYVLTTLVSLQQLHLNDTGIKEIPDSLAALVNLQQLYLYNNQIKEIPDS-LAALSN 233

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           +  + L+ N+    P     +  S+  ++   NQI +IP   F+  KNL K+++  N + 
Sbjct: 234 LQRLQLNFNRIKKIPD-SLAKLASLQQLDLNINQISEIPDS-FATLKNLQKLDLGSNQIK 291

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            +P   G    L +LNLG+NQI K+ +    L +L+ L LS+N ++++P S   L  L+ 
Sbjct: 292 KIPDSFGKLASLQQLNLGSNQIKKIPDSFGKLASLQQLNLSHNKIEEIPDSFATLVNLQQ 351

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L L  N ++ +P+ +  L  LQ+L   SNQ+  +P ++  L NL  L +  N ++ IP+ 
Sbjct: 352 LYLYNNPIKEVPDSLATLVNLQQLGFSSNQIKEIPDSLATLVNLQQLDISSNQIKEIPDS 411

Query: 514 IGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           +  L +L  L L+ +T +  IP  L+   NLQ ++L    + +IP   V
Sbjct: 412 LAALTHLQNLGLS-STQITEIPDFLSTLVNLQQLNLSFNQIKKIPDSFV 459



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/432 (31%), Positives = 227/432 (52%), Gaps = 9/432 (2%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           N +  ++++  LPP   +L  L+ L    N L ++P  I     L  L L+ N +  +P+
Sbjct: 50  NGEAQENNLKTLPPETTQLQKLKRLEWPCNNLEAIPVIITKFPKLKQLNLSFNQIKEIPE 109

Query: 165 SLANLQQLRVLDLRHN-KLNELPMVVYKLTSLKILYLRFN-RIKTVHPDIQYLSNLSMLS 222
           SL+ L  L+ LDL  N ++ E+P  +  L +L+ L L  N +IK +   +  L NL  L 
Sbjct: 110 SLSALINLQQLDLSANHQIKEIPDSLSALINLQQLDLSANHQIKEIPDSLAALVNLQQLQ 169

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N I+E+P  L  L +L  L L    ++E+P  +     L  L L +N++  IPD L 
Sbjct: 170 LGGNPIKEIPYVLTTLVSLQQLHLNDTGIKEIPDSLAALVNLQQLYLYNNQIKEIPDSLA 229

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L NL RL+L++NR++ +P++L+K   L + ++    +S +PD   ++L ++  + L  N
Sbjct: 230 ALSNLQRLQLNFNRIKKIPDSLAKLASLQQLDLNINQISEIPDS-FATLKNLQKLDLGSN 288

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
           +    P     +  S+  +N   NQI KIP   F +  +L ++N+  N +  +P    T 
Sbjct: 289 QIKKIPDSF-GKLASLQQLNLGSNQIKKIPDS-FGKLASLQQLNLSHNKIEEIPDSFATL 346

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
           V L +L L  N I ++ + +  LVNL+ L  S+N +K++P S+  L  L+ LD+  N+++
Sbjct: 347 VNLQQLYLYNNPIKEVPDSLATLVNLQQLGFSSNQIKEIPDSLATLVNLQQLDISSNQIK 406

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            +P+ +  L  LQ L L S Q+  +P  +  L NL  L++  N ++ IP+    L +L  
Sbjct: 407 EIPDSLAALTHLQNLGLSSTQITEIPDFLSTLVNLQQLNLSFNQIKKIPDSFVKLASLQA 466

Query: 523 LYLNDNTCLNNI 534
           LYL    C N I
Sbjct: 467 LYL----CSNQI 474



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 200/369 (54%), Gaps = 4/369 (1%)

Query: 102 NILNLDLSKS-SITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           N+  LDLS +  I  +P S+  L +L++L L GN +  +P  +  + +L  L L +  + 
Sbjct: 140 NLQQLDLSANHQIKEIPDSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTGIK 199

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            +PDSLA L  L+ L L +N++ E+P  +  L++L+ L L FNRIK +   +  L++L  
Sbjct: 200 EIPDSLAALVNLQQLYLYNNQIKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAKLASLQQ 259

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+I E+P     LKNL  LDL  N ++++P   G    L  L+L  N++  IPD 
Sbjct: 260 LDLNINQISEIPDSFATLKNLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQIKKIPDS 319

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
            G L +L +L LS+N++E +P++ +  V+L +  +    +  +PD  L++L ++  +  S
Sbjct: 320 FGKLASLQQLNLSHNKIEEIPDSFATLVNLQQLYLYNNPIKEVPDS-LATLVNLQQLGFS 378

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P    T   ++  ++   NQI +IP  + +   +L  + +    +T +P  L 
Sbjct: 379 SNQIKEIPDSLAT-LVNLQQLDISSNQIKEIPDSL-AALTHLQNLGLSSTQITEIPDFLS 436

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
           T V L +LNL  NQI K+ +    L +L+ L L +N + K+PS + NL  L+ LDL  N 
Sbjct: 437 TLVNLQQLNLSFNQIKKIPDSFVKLASLQALYLCSNQITKIPSFLENLPALQKLDLRLNP 496

Query: 461 LESLPNEIG 469
           +   P  +G
Sbjct: 497 IPVSPEILG 505



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 216/432 (50%), Gaps = 32/432 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGN-KLASLPSQIGYVTNLTCLGLAEN-SLTSLP 163
           L+LS + I  +P S+  L +L++L L  N ++  +P  +  + NL  L L+ N  +  +P
Sbjct: 97  LNLSFNQIKEIPESLSALINLQQLDLSANHQIKEIPDSLSALINLQQLDLSANHQIKEIP 156

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           DSLA L  L+ L L  N + E+P V+  L SL+ L+L    IK +   +  L NL  L +
Sbjct: 157 DSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTGIKEIPDSLAALVNLQQLYL 216

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
            +N+I+E+P  L  L NL  L L  N ++++P  +     L  LDL  N++  IPD    
Sbjct: 217 YNNQIKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAKLASLQQLDLNINQISEIPDSFAT 276

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L NL +L L  N+++ +P++  K   L + N+    +  +PD                  
Sbjct: 277 LKNLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQIKKIPDSF---------------- 320

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
                     +  S+  +N  HN+I++IP   F+   NL ++ + +N +  +P  L T V
Sbjct: 321 ---------GKLASLQQLNLSHNKIEEIPDS-FATLVNLQQLYLYNNPIKEVPDSLATLV 370

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            L +L   +NQI ++ + +  LVNL+ L +S+N +K++P S+  L  L+ L L   ++  
Sbjct: 371 NLQQLGFSSNQIKEIPDSLATLVNLQQLDISSNQIKEIPDSLAALTHLQNLGLSSTQITE 430

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           +P+ +  L  LQ+L L  NQ+  +P +   L +L  L +  N +  IP  +  L  L  L
Sbjct: 431 IPDFLSTLVNLQQLNLSFNQIKKIPDSFVKLASLQALYLCSNQITKIPSFLENLPALQKL 490

Query: 524 YLNDNTCLNNIP 535
            L     LN IP
Sbjct: 491 DLR----LNPIP 498



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 99/178 (55%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS + I  +P S   L +L++LYLY N +  +P  +  + NL  LG + N +  +PDS
Sbjct: 329 LNLSHNKIEEIPDSFATLVNLQQLYLYNNPIKEVPDSLATLVNLQQLGFSSNQIKEIPDS 388

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           LA L  L+ LD+  N++ E+P  +  LT L+ L L   +I  +   +  L NL  L++  
Sbjct: 389 LATLVNLQQLDISSNQIKEIPDSLAALTHLQNLGLSSTQITEIPDFLSTLVNLQQLNLSF 448

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
           N+I+++P    +L +L  L L  N + ++P  + N   L  LDL+ N +   P++LG+
Sbjct: 449 NQIKKIPDSFVKLASLQALYLCSNQITKIPSFLENLPALQKLDLRLNPIPVSPEILGS 506


>gi|418719292|ref|ZP_13278492.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410744445|gb|EKQ93186.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 399

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/367 (37%), Positives = 207/367 (56%), Gaps = 29/367 (7%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +L ++L N   +R+L L +N+   LP  + +L +L  LYL  N++KT+  +I  L  +  
Sbjct: 33  NLTEALQNPTDVRILSLHNNE--TLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIER 90

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+ +N++  LP ++G+LK L  LDL +N L  LPKEIG    L  L L +N+L  +P  
Sbjct: 91  LSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELYLYNNQLKTLPKD 150

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L+++P+ + K  +L E N+    L++LP  +  +L ++  + L 
Sbjct: 151 IGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDI-GNLKNLGELLLI 209

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + KNL  + +   LLT+LP D+G
Sbjct: 210 NNELTTLPKE-------------------------IGKLKNLQVLYL-GALLTTLPNDIG 243

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L ELNL  NQI+ L +DI  L NL+VL LS N L  LP  IG L+ L+ LDL  N+
Sbjct: 244 YLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQ 303

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           + +LP EIG L+ L+ L L  NQ+ +LP+ IG L +L  L++G N + +IP+EIG L+NL
Sbjct: 304 ITTLPKEIGELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIPKEIGHLKNL 363

Query: 521 HTLYLND 527
             LYL+D
Sbjct: 364 QVLYLDD 370



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 117/320 (36%), Positives = 185/320 (57%), Gaps = 4/320 (1%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LP  + +L +L ELYL  N+L +LP +IG +  +  L L+ N LT+LP  +  L++LR L
Sbjct: 55  LPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLREL 114

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           DL +N L  LP  + +L +L+ LYL  N++KT+  DI  L NL  L +  N+++ LP ++
Sbjct: 115 DLTNNLLTTLPKEIGQLQNLRELYLYNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDI 174

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
           G+L+NL  L+L +N L  LPK+IGN   L  L L +NEL  +P  +G L NL  L L   
Sbjct: 175 GKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGA- 233

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
            L ++P  +     L E N+ G  +++LP   +  L ++  + LS N+    P     Q 
Sbjct: 234 LLTTLPNDIGYLKSLRELNLSGNQITTLPKD-IGQLQNLQVLYLSENQLATLPK-EIGQL 291

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
            ++  ++   NQI  +P  I    ++L ++N+  N +T+LP ++G    L ELNLG NQI
Sbjct: 292 QNLRELDLSGNQITTLPKEI-GELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQI 350

Query: 416 SKLSEDIQNLVNLEVLVLSN 435
           + + ++I +L NL+VL L +
Sbjct: 351 TTIPKEIGHLKNLQVLYLDD 370



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/361 (34%), Positives = 196/361 (54%), Gaps = 30/361 (8%)

Query: 193 TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLE 252
           T ++IL L  N  +T+  +I  L NL+ L +  N+++ LP E+G+L+ +  L L++N L 
Sbjct: 42  TDVRILSLHNN--ETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLT 99

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
            LPK+IG    L  LDL +N L  +P  +G L NL  L L  N+L+++P+ + +  +L E
Sbjct: 100 TLPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELYLYNNQLKTLPKDIGQLQNLRE 159

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
             ++G  L +LP      +  + N+T                      +N  +N +  +P
Sbjct: 160 LYLDGNQLKTLP----KDIGKLQNLT---------------------ELNLTNNPLTTLP 194

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I    KNL ++ + +N LT+LP ++G    L  L LG   ++ L  DI  L +L  L 
Sbjct: 195 KDI-GNLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGA-LLTTLPNDIGYLKSLRELN 252

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           LS N +  LP  IG L+ L+ L L EN+L +LP EIG L+ L+ L L  NQ+ +LP+ IG
Sbjct: 253 LSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKEIG 312

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L +L  L++  N + ++P+EIG L++L  L L  N  +  IP E+    NLQ++ LD+ 
Sbjct: 313 ELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQ-ITTIPKEIGHLKNLQVLYLDDI 371

Query: 553 P 553
           P
Sbjct: 372 P 372



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/291 (36%), Positives = 153/291 (52%), Gaps = 4/291 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K + I  L LS + +T LP  + KL  L EL L  N L +LP +IG + NL  L L  N 
Sbjct: 84  KLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELYLYNNQ 143

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L +LP  +  LQ LR L L  N+L  LP  + KL +L  L L  N + T+  DI  L NL
Sbjct: 144 LKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNL 203

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L + +N++  LP E+G+LKNL  L L    L  LP +IG    L  L+L  N++  +P
Sbjct: 204 GELLLINNELTTLPKEIGKLKNLQVLYLGA-LLTTLPNDIGYLKSLRELNLSGNQITTLP 262

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L NL  L LS N+L ++P+ + +  +L E ++ G  +++LP   +  L S+  + 
Sbjct: 263 KDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKE-IGELQSLRELN 321

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
           LS N+ T  P     +  S+  +N   NQI  IP  I    KNL  + + D
Sbjct: 322 LSGNQITTLPK-EIGKLQSLRELNLGGNQITTIPKEI-GHLKNLQVLYLDD 370



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 159/308 (51%), Gaps = 30/308 (9%)

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           L + + N T +  L L +NE   +P  +G L NLT L LS N+L+++P+ + K   +   
Sbjct: 34  LTEALQNPTDVRILSLHNNE--TLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERL 91

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           ++    L++LP  +   L  +  + L+ N  T  P                         
Sbjct: 92  SLSNNQLTTLPKDI-GKLKKLRELDLTNNLLTTLPKE----------------------- 127

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
               + +NL ++ + +N L +LP D+G    L EL L  NQ+  L +DI  L NL  L L
Sbjct: 128 --IGQLQNLRELYLYNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNL 185

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           +NN L  LP  IGNL+ L  L L  N+L +LP EIG LK LQ L L +  L +LP  IG+
Sbjct: 186 TNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGA-LLTTLPNDIGY 244

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L +L  L++  N + ++P++IG L+NL  LYL++N  L  +P E+    NL+ + L    
Sbjct: 245 LKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQ-LATLPKEIGQLQNLRELDLSGNQ 303

Query: 554 LSQIPSEI 561
           ++ +P EI
Sbjct: 304 ITTLPKEI 311


>gi|421113137|ref|ZP_15573589.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           JET]
 gi|410801511|gb|EKS07677.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           JET]
          Length = 444

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/373 (36%), Positives = 210/373 (56%), Gaps = 3/373 (0%)

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L +LP  +  LQ LR LDL  N+L  LP  + KL  L+ L L  NR+  +  +I  L NL
Sbjct: 68  LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNL 127

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L + +N++  LP E+G+L+NL  L+L  N L  LPK I     L  L L  N L N+P
Sbjct: 128 QELHLENNQLTTLPEEIGKLQNLQELNLGFNQLTALPKGIEKLQKLQELHLYSNRLANLP 187

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           + +G L NL +L L  N+L ++P+ + K   L +  +    L++LP+ +   L ++ ++ 
Sbjct: 188 EEIGKLQNLQKLNLGVNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEI-EKLQNLRDLY 246

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           L  N+ T   S    +  ++  +    NQ+  +P  I  + + L  ++++ + LT+LP  
Sbjct: 247 LEGNQLTTL-SKEIGKLQNLRDLYLGGNQLTTLPKEI-GKLQKLQTLHLEGSQLTTLPKG 304

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +     L +L L  NQ++ L + I+ L NL+ L LS+N L  LP  I  L+KL+ LDL +
Sbjct: 305 IEKLQNLRDLYLENNQLTTLPKGIEKLQNLQELYLSSNKLTTLPEEIEKLQKLQRLDLSK 364

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           NKL +LP EIG L++L+ L L  NQL +LP  IG+L +L  L++  N+L S PEEIG L+
Sbjct: 365 NKLTTLPKEIGKLQKLRGLYLDHNQLKTLPEEIGNLQSLESLNLRGNSLTSFPEEIGKLQ 424

Query: 519 NLHTLYLNDNTCL 531
            L  LYL  N  L
Sbjct: 425 KLQQLYLGGNPFL 437



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 145/435 (33%), Positives = 227/435 (52%), Gaps = 36/435 (8%)

Query: 53  DNKKCGVDVKKTVTVKHPESNK-----PKPTTKKKEPIQADLNIEKEFLRCKEENILNLD 107
           + K+ GV    T  ++HP   +     P+      +P+     + KE    K +N+ +LD
Sbjct: 31  EAKENGVYYNLTEALQHPTDVQYLYLGPRERKNSNDPLWT---LPKEI--GKLQNLRDLD 85

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           LS + +  LP  + KL  L++L L  N+LA+LP +IG + NL  L L  N LT+LP+ + 
Sbjct: 86  LSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQELHLENNQLTTLPEEIG 145

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
            LQ L+ L+L  N+L  LP  + KL  L+ L+L  NR+  +  +I  L NL  L++  N+
Sbjct: 146 KLQNLQELNLGFNQLTALPKGIEKLQKLQELHLYSNRLANLPEEIGKLQNLQKLNLGVNQ 205

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           +  LP  + +L+ L  L L  N L  LP+EI     L  L L+ N+L  +   +G L NL
Sbjct: 206 LTALPKGIEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLYLEGNQLTTLSKEIGKLQNL 265

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L L  N+L ++P+ + K   L   ++EG  L++LP G +  L ++ ++ L  N+ T  
Sbjct: 266 RDLYLGGNQLTTLPKEIGKLQKLQTLHLEGSQLTTLPKG-IEKLQNLRDLYLENNQLTTL 324

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
           P G                 I+K+        +NL ++ +  N LT+LP ++     L  
Sbjct: 325 PKG-----------------IEKL--------QNLQELYLSSNKLTTLPEEIEKLQKLQR 359

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           L+L  N+++ L ++I  L  L  L L +N LK LP  IGNL+ L+ L+L  N L S P E
Sbjct: 360 LDLSKNKLTTLPKEIGKLQKLRGLYLDHNQLKTLPEEIGNLQSLESLNLRGNSLTSFPEE 419

Query: 468 IGFLKELQRLILQSN 482
           IG L++LQ+L L  N
Sbjct: 420 IGKLQKLQQLYLGGN 434



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 132/359 (36%), Positives = 196/359 (54%), Gaps = 14/359 (3%)

Query: 209 HP-DIQYLSNLSMLSMRDNK-----IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           HP D+QYL     L  R+ K     +  LP E+G+L+NL  LDL+ N L  LPKEIG   
Sbjct: 47  HPTDVQYL----YLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQ 102

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  L+L  N L N+P+ +G L NL  L L  N+L ++PE + K  +L E N+    L++
Sbjct: 103 KLQKLNLTRNRLANLPEEIGKLQNLQELHLENNQLTTLPEEIGKLQNLQELNLGFNQLTA 162

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LP G+   L  +  + L  N+    P     +  ++  +N   NQ+  +P GI  + + L
Sbjct: 163 LPKGI-EKLQKLQELHLYSNRLANLPEE-IGKLQNLQKLNLGVNQLTALPKGI-EKLQKL 219

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
            ++ +  N LT+LP ++     L +L L  NQ++ LS++I  L NL  L L  N L  LP
Sbjct: 220 QQLYLYSNRLTNLPEEIEKLQNLRDLYLEGNQLTTLSKEIGKLQNLRDLYLGGNQLTTLP 279

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
             IG L+KL+ L LE ++L +LP  I  L+ L+ L L++NQL +LP+ I  L NL  L +
Sbjct: 280 KEIGKLQKLQTLHLEGSQLTTLPKGIEKLQNLRDLYLENNQLTTLPKGIEKLQNLQELYL 339

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             N L ++PEEI  L+ L  L L+ N  L  +P E+     L+ + LD+  L  +P EI
Sbjct: 340 SSNKLTTLPEEIEKLQKLQRLDLSKNK-LTTLPKEIGKLQKLRGLYLDHNQLKTLPEEI 397



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 137/246 (55%), Gaps = 1/246 (0%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L+L  + +T LP  +EKL  L++LYLY N+L +LP +I  + NL  L L  N 
Sbjct: 192 KLQNLQKLNLGVNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLYLEGNQ 251

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+L   +  LQ LR L L  N+L  LP  + KL  L+ L+L  +++ T+   I+ L NL
Sbjct: 252 LTTLSKEIGKLQNLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEGSQLTTLPKGIEKLQNL 311

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L + +N++  LP  + +L+NL  L L+ N L  LP+EI     L  LDL  N+L  +P
Sbjct: 312 RDLYLENNQLTTLPKGIEKLQNLQELYLSSNKLTTLPEEIEKLQKLQRLDLSKNKLTTLP 371

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L  L  L L +N+L+++PE +     L   N+ G +L+S P+  +  L  +  + 
Sbjct: 372 KEIGKLQKLRGLYLDHNQLKTLPEEIGNLQSLESLNLRGNSLTSFPEE-IGKLQKLQQLY 430

Query: 339 LSRNKF 344
           L  N F
Sbjct: 431 LGGNPF 436


>gi|440801654|gb|ELR22663.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 936

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 156/484 (32%), Positives = 246/484 (50%), Gaps = 28/484 (5%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E +  L L+ ++I  LPP +  LT L    L+GNKL SLP +IG + +LT L L +N L+
Sbjct: 59  EELTWLSLNHNAIESLPPEIANLTRLTIFRLFGNKLKSLPPEIGALAHLTTLDLGKNLLS 118

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP  + +L  L+ L +  N+L E+P  V KLT+L  L L  NR+ T+  ++Q L+ L  
Sbjct: 119 SLPPQIGDLSLLKELHVHWNRLEEVPPEVGKLTALHTLNLYINRLTTLPDELQSLTALEN 178

Query: 221 LSMRDNKIRELPPELGELKNLVT-----------------------LDLAHNHLEELPKE 257
           L +  N    LP  + +  +L                         LDL  N L  LP E
Sbjct: 179 LDIAHNAFSTLPAVIAQFSSLTNLKLVGNDFKSIGNELSHAVCLQKLDLRCNFLTTLPPE 238

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           IGN T L  L L++N L ++P  LGNL  L  L L  N+L  VP  +++  +L   +   
Sbjct: 239 IGNLTALRHLLLRNNCLTSLPAELGNLSELLELSLGNNKLTWVPPEITRLSNLRNLDFWE 298

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             +S LPD  L  L S+  + +S N   A P G  T  TS+  +   +N++  +P  I  
Sbjct: 299 NQISELPD--LGGLVSLQELDVSFNTLQALPEGLET-LTSLRRLWANNNELTSLPASIRG 355

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
               LS++++  N +T LP ++     L+ L+   N IS+L+ D+ NL +L  L L +N 
Sbjct: 356 LV-GLSELSVTSNRITELPSEIAQLSCLSRLSASANFISELNVDLSNLQHLWCLELGHNN 414

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L + P S+     L  L+L  N L  +P++IG L +LQRL L  N++  LP  +  +  L
Sbjct: 415 LMEFPVSVFEAPGLLQLNLFGNGLSVVPDDIGRLTKLQRLYLSCNKIEHLPEQMKEMVAL 474

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
             L +G N+    P  +  L  L  L L  N+  + +P  ++  + L+++ ++   + ++
Sbjct: 475 KDLYIGSNSFTEFPPVVFELTTLRELSLA-NSNFSVVPPHISKLAGLEVLHMNGNEIKEL 533

Query: 558 PSEI 561
           P+EI
Sbjct: 534 PAEI 537



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 140/468 (29%), Positives = 224/468 (47%), Gaps = 48/468 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL K+ ++ LPP +  L+ L+EL+++ N+L  +P ++G +T L  L L  N LT+LPD 
Sbjct: 110 LDLGKNLLSSLPPQIGDLSLLKELHVHWNRLEEVPPEVGKLTALHTLNLYINRLTTLPDE 169

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L +L  L  LD+ HN  + LP V+ + +SL  L L  N  K++  ++ +   L  L +R 
Sbjct: 170 LQSLTALENLDIAHNAFSTLPAVIAQFSSLTNLKLVGNDFKSIGNELSHAVCLQKLDLRC 229

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTM---------------------- 263
           N +  LPPE+G L  L  L L +N L  LP E+GN +                       
Sbjct: 230 NFLTTLPPEIGNLTALRHLLLRNNCLTSLPAELGNLSELLELSLGNNKLTWVPPEITRLS 289

Query: 264 -LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  LD   N++  +PD LG L++L  L +S+N L+++PE L     L         L+S
Sbjct: 290 NLRNLDFWENQISELPD-LGGLVSLQELDVSFNTLQALPEGLETLTSLRRLWANNNELTS 348

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPS-----------GGPTQFTS-----------VYS 360
           LP  +   L  ++ ++++ N+ T  PS                F S           ++ 
Sbjct: 349 LPASI-RGLVGLSELSVTSNRITELPSEIAQLSCLSRLSASANFISELNVDLSNLQHLWC 407

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
           +   HN + + P  +F  A  L ++N+  N L+ +P D+G    L  L L  N+I  L E
Sbjct: 408 LELGHNNLMEFPVSVF-EAPGLLQLNLFGNGLSVVPDDIGRLTKLQRLYLSCNKIEHLPE 466

Query: 421 DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQ 480
            ++ +V L+ L + +N   + P  +  L  L+ L L  +    +P  I  L  L+ L + 
Sbjct: 467 QMKEMVALKDLYIGSNSFTEFPPVVFELTTLRELSLANSNFSVVPPHISKLAGLEVLHMN 526

Query: 481 SNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            N++  LP  IG L NL  L +  N L ++P E   L  L  L ++ N
Sbjct: 527 GNEIKELPAEIGALINLKELDLSHNCLAALPAEFTALRRLAELDISHN 574



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 171/327 (52%), Gaps = 25/327 (7%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           +T +PP + +L++L  L  + N+++ LP  +G + +L  L ++ N+L +LP+ L  L  L
Sbjct: 278 LTWVPPEITRLSNLRNLDFWENQISELP-DLGGLVSLQELDVSFNTLQALPEGLETLTSL 336

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
           R L   +N+L  LP  +  L  L  L +  NRI  +  +I  LS LS LS   N I EL 
Sbjct: 337 RRLWANNNELTSLPASIRGLVGLSELSVTSNRITELPSEIAQLSCLSRLSASANFISELN 396

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            +L  L++L  L+L HN+L E P  +     L+ L+L  N L  +PD +G L  L RL L
Sbjct: 397 VDLSNLQHLWCLELGHNNLMEFPVSVFEAPGLLQLNLFGNGLSVVPDDIGRLTKLQRLYL 456

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           S N++E +PE + + V L +  +   + +  P  ++  LT++  ++L+ + F+  P    
Sbjct: 457 SCNKIEHLPEQMKEMVALKDLYIGSNSFTEFPP-VVFELTTLRELSLANSNFSVVPPH-I 514

Query: 353 TQFTSVYSINFEHNQIDKIPYGI----------------------FSRAKNLSKVNMKDN 390
           ++   +  ++   N+I ++P  I                      F+  + L+++++  N
Sbjct: 515 SKLAGLEVLHMNGNEIKELPAEIGALINLKELDLSHNCLAALPAEFTALRRLAELDISHN 574

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISK 417
            LTSLP+ + ++  + +L LG N+++K
Sbjct: 575 ELTSLPVGIKSFQQICQLKLGHNRLAK 601



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 112/197 (56%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +++  L+L  +++   P SV +   L +L L+GN L+ +P  IG +T L  L L+ N + 
Sbjct: 403 QHLWCLELGHNNLMEFPVSVFEAPGLLQLNLFGNGLSVVPDDIGRLTKLQRLYLSCNKIE 462

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP+ +  +  L+ L +  N   E P VV++LT+L+ L L  +    V P I  L+ L +
Sbjct: 463 HLPEQMKEMVALKDLYIGSNSFTEFPPVVFELTTLRELSLANSNFSVVPPHISKLAGLEV 522

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L M  N+I+ELP E+G L NL  LDL+HN L  LP E      L  LD+ HNEL ++P  
Sbjct: 523 LHMNGNEIKELPAEIGALINLKELDLSHNCLAALPAEFTALRRLAELDISHNELTSLPVG 582

Query: 281 LGNLINLTRLRLSYNRL 297
           + +   + +L+L +NRL
Sbjct: 583 IKSFQQICQLKLGHNRL 599



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 60/104 (57%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L+ S+ + +PP + KL  LE L++ GN++  LP++IG + NL  L L+ N L +LP  
Sbjct: 500 LSLANSNFSVVPPHISKLAGLEVLHMNGNEIKELPAEIGALINLKELDLSHNCLAALPAE 559

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
              L++L  LD+ HN+L  LP+ +     +  L L  NR+   H
Sbjct: 560 FTALRRLAELDISHNELTSLPVGIKSFQQICQLKLGHNRLAKSH 603


>gi|260802102|ref|XP_002595932.1| hypothetical protein BRAFLDRAFT_235470 [Branchiostoma floridae]
 gi|229281184|gb|EEN51944.1| hypothetical protein BRAFLDRAFT_235470 [Branchiostoma floridae]
          Length = 467

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 142/429 (33%), Positives = 218/429 (50%), Gaps = 8/429 (1%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN-SLTSLPDSL 166
           LS  ++  +P  V ++  +E L L  N L SLP +IG + NL  L ++ N  L  LPD +
Sbjct: 1   LSNKNLETIPQEVFEIKEIEGLLLQDNDLESLPGEIGTLPNLRYLNVSNNHRLEDLPDEV 60

Query: 167 ANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDN 226
            N Q+L  + L H  L ++P VV  L  L IL L  N+++++  DI  L  L  L +  N
Sbjct: 61  GNAQKLAHISLIHCSLQQIPAVVLSLKGLDILDLDRNKLQSIPDDISNLQVLRELWLTGN 120

Query: 227 KIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           ++  LP  +G L NL  L L+ N L  LP E+GN   L  L L+ N+L+ +P  +G ++N
Sbjct: 121 QLESLPDSIGLLMNLQKLGLSRNKLTSLPDELGNLLFLRELWLRDNKLMTLPASIGEMVN 180

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L RL L  N+L  +PE + K   L    +EG  L S+P   +  L+++  + LS NK   
Sbjct: 181 LLRLNLEENKLTYLPEEMGKMESLLVLRLEGNNLRSIP-AQIGQLSNLEELGLSENKLVK 239

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P        ++  +    N+I++ P G+ SR  NL  +    N +  LP D+G    L 
Sbjct: 240 LPED-VCNLENLKELAMGKNRIEEFPEGL-SRLSNLESLFANQNRIAFLPRDIGKLRYLR 297

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLS----NNLLKKLPSSIGNLRKLKCLDLEENKLE 462
           EL++ +N+     E++ +L +LE L L           +P  IG L +L+ L L+ N   
Sbjct: 298 ELSIASNEFEDFPEEVLDLTSLEKLYLGQWGGGEKFTVIPEEIGTLVRLRVLGLDSNAFR 357

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
           ++P+ I  L+ L+ L L  N+L +LP  I  L NL  L VG N L+ +P  +  L  L  
Sbjct: 358 NVPDSIENLRHLRELYLDHNKLEALPDNISFLRNLRSLDVGTNRLKRLPTCLDKLTRLKK 417

Query: 523 LYLNDNTCL 531
             +  N  L
Sbjct: 418 FNVEKNPQL 426



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 186/362 (51%), Gaps = 9/362 (2%)

Query: 205 IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH-LEELPKEIGNCTM 263
           ++T+  ++  +  +  L ++DN +  LP E+G L NL  L++++NH LE+LP E+GN   
Sbjct: 6   LETIPQEVFEIKEIEGLLLQDNDLESLPGEIGTLPNLRYLNVSNNHRLEDLPDEVGNAQK 65

Query: 264 LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSL 323
           L  + L H  L  IP ++ +L  L  L L  N+L+S+P+ +S    L E  + G  L SL
Sbjct: 66  LAHISLIHCSLQQIPAVVLSLKGLDILDLDRNKLQSIPDDISNLQVLRELWLTGNQLESL 125

Query: 324 PDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           PD +   L ++  + LSRNK T+ P   G   F  +  +    N++  +P  I     NL
Sbjct: 126 PDSI-GLLMNLQKLGLSRNKLTSLPDELGNLLF--LRELWLRDNKLMTLPASI-GEMVNL 181

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
            ++N+++N LT LP ++G    L  L L  N +  +   I  L NLE L LS N L KLP
Sbjct: 182 LRLNLEENKLTYLPEEMGKMESLLVLRLEGNNLRSIPAQIGQLSNLEELGLSENKLVKLP 241

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
             + NL  LK L + +N++E  P  +  L  L+ L    N++  LPR IG L  L  LS+
Sbjct: 242 EDVCNLENLKELAMGKNRIEEFPEGLSRLSNLESLFANQNRIAFLPRDIGKLRYLRELSI 301

Query: 503 GENNLQSIPEEIGTLENLHTLYLND---NTCLNNIPFELALCSNLQIMSLDNCPLSQIPS 559
             N  +  PEE+  L +L  LYL           IP E+     L+++ LD+     +P 
Sbjct: 302 ASNEFEDFPEEVLDLTSLEKLYLGQWGGGEKFTVIPEEIGTLVRLRVLGLDSNAFRNVPD 361

Query: 560 EI 561
            I
Sbjct: 362 SI 363



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 196/387 (50%), Gaps = 46/387 (11%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL ++ +  +P  +  L  L EL+L GN+L SLP  IG + NL  LGL+ N LTSLPD 
Sbjct: 92  LDLDRNKLQSIPDDISNLQVLRELWLTGNQLESLPDSIGLLMNLQKLGLSRNKLTSLPDE 151

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L NL  LR L LR NKL  LP  + ++                        NL  L++ +
Sbjct: 152 LGNLLFLRELWLRDNKLMTLPASIGEMV-----------------------NLLRLNLEE 188

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+  LP E+G++++L+ L L  N+L  +P +IG  + L  L L  N+LV +P+ + NL 
Sbjct: 189 NKLTYLPEEMGKMESLLVLRLEGNNLRSIPAQIGQLSNLEELGLSENKLVKLPEDVCNLE 248

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L +  NR+E  PE LS+  +L         ++ LP   +  L  +  ++++ N+F 
Sbjct: 249 NLKELAMGKNRIEEFPEGLSRLSNLESLFANQNRIAFLPRD-IGKLRYLRELSIASNEFE 307

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P         V  +      ++K+  G +   +            T +P ++GT V L
Sbjct: 308 DFPE-------EVLDL----TSLEKLYLGQWGGGEK----------FTVIPEEIGTLVRL 346

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L L +N    + + I+NL +L  L L +N L+ LP +I  LR L+ LD+  N+L+ LP
Sbjct: 347 RVLGLDSNAFRNVPDSIENLRHLRELYLDHNKLEALPDNISFLRNLRSLDVGTNRLKRLP 406

Query: 466 NEIGFLKELQRLILQSN-QLVSLPRAI 491
             +  L  L++  ++ N QLV  P+ +
Sbjct: 407 TCLDKLTRLKKFNVEKNPQLVYPPQDV 433



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 209/390 (53%), Gaps = 9/390 (2%)

Query: 177 LRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDN-KIRELPPEL 235
           L +  L  +P  V+++  ++ L L+ N ++++  +I  L NL  L++ +N ++ +LP E+
Sbjct: 1   LSNKNLETIPQEVFEIKEIEGLLLQDNDLESLPGEIGTLPNLRYLNVSNNHRLEDLPDEV 60

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
           G  + L  + L H  L+++P  + +   L  LDL  N+L +IPD + NL  L  L L+ N
Sbjct: 61  GNAQKLAHISLIHCSLQQIPAVVLSLKGLDILDLDRNKLQSIPDDISNLQVLRELWLTGN 120

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
           +LES+P+++   ++L +  +    L+SLPD L  +L  +  + L  NK    P+    + 
Sbjct: 121 QLESLPDSIGLLMNLQKLGLSRNKLTSLPDEL-GNLLFLRELWLRDNKLMTLPAS-IGEM 178

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
            ++  +N E N++  +P  +  + ++L  + ++ N L S+P  +G    L EL L  N++
Sbjct: 179 VNLLRLNLEENKLTYLPEEM-GKMESLLVLRLEGNNLRSIPAQIGQLSNLEELGLSENKL 237

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
            KL ED+ NL NL+ L +  N +++ P  +  L  L+ L   +N++  LP +IG L+ L+
Sbjct: 238 VKLPEDVCNLENLKELAMGKNRIEEFPEGLSRLSNLESLFANQNRIAFLPRDIGKLRYLR 297

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGE----NNLQSIPEEIGTLENLHTLYLNDNTCL 531
            L + SN+    P  +  LT+L  L +G+         IPEEIGTL  L  L L D+   
Sbjct: 298 ELSIASNEFEDFPEEVLDLTSLEKLYLGQWGGGEKFTVIPEEIGTLVRLRVLGL-DSNAF 356

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N+P  +    +L+ + LD+  L  +P  I
Sbjct: 357 RNVPDSIENLRHLRELYLDHNKLEALPDNI 386



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 167/318 (52%), Gaps = 5/318 (1%)

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN-RLESVPETL 304
           L++ +LE +P+E+     +  L LQ N+L ++P  +G L NL  L +S N RLE +P+ +
Sbjct: 1   LSNKNLETIPQEVFEIKEIEGLLLQDNDLESLPGEIGTLPNLRYLNVSNNHRLEDLPDEV 60

Query: 305 SKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFE 364
                L   ++  C+L  +P  +LS L  ++ + L RNK  + P    +    +  +   
Sbjct: 61  GNAQKLAHISLIHCSLQQIPAVVLS-LKGLDILDLDRNKLQSIPDD-ISNLQVLRELWLT 118

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN 424
            NQ++ +P  I     NL K+ +  N LTSLP +LG  + L EL L  N++  L   I  
Sbjct: 119 GNQLESLPDSI-GLLMNLQKLGLSRNKLTSLPDELGNLLFLRELWLRDNKLMTLPASIGE 177

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           +VNL  L L  N L  LP  +G +  L  L LE N L S+P +IG L  L+ L L  N+L
Sbjct: 178 MVNLLRLNLEENKLTYLPEEMGKMESLLVLRLEGNNLRSIPAQIGQLSNLEELGLSENKL 237

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
           V LP  + +L NL  L++G+N ++  PE +  L NL +L+ N N  +  +P ++     L
Sbjct: 238 VKLPEDVCNLENLKELAMGKNRIEEFPEGLSRLSNLESLFANQNR-IAFLPRDIGKLRYL 296

Query: 545 QIMSLDNCPLSQIPSEIV 562
           + +S+ +      P E++
Sbjct: 297 RELSIASNEFEDFPEEVL 314



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 110/222 (49%), Gaps = 4/222 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K E++L L L  +++  +P  + +L++LEEL L  NKL  LP  +  + NL  L + +N 
Sbjct: 200 KMESLLVLRLEGNNLRSIPAQIGQLSNLEELGLSENKLVKLPEDVCNLENLKELAMGKNR 259

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           +   P+ L+ L  L  L    N++  LP  + KL  L+ L +  N  +    ++  L++L
Sbjct: 260 IEEFPEGLSRLSNLESLFANQNRIAFLPRDIGKLRYLRELSIASNEFEDFPEEVLDLTSL 319

Query: 219 SMLSMRD----NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
             L +       K   +P E+G L  L  L L  N    +P  I N   L  L L HN+L
Sbjct: 320 EKLYLGQWGGGEKFTVIPEEIGTLVRLRVLGLDSNAFRNVPDSIENLRHLRELYLDHNKL 379

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE 316
             +PD +  L NL  L +  NRL+ +P  L K   L +FNVE
Sbjct: 380 EALPDNISFLRNLRSLDVGTNRLKRLPTCLDKLTRLKKFNVE 421


>gi|418744841|ref|ZP_13301186.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794172|gb|EKR92082.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 485

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 138/373 (36%), Positives = 204/373 (54%), Gaps = 26/373 (6%)

Query: 133 GNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKL 192
           GNKL +LP +IG + NL  L L  N LT+LP+ + NLQ+L+ LDL HN+L  LP  +  L
Sbjct: 118 GNKLTTLPKEIGNLQNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNL 177

Query: 193 TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLE 252
             L+ L L  N++KT+  +I+ L  L  L + +N++  LP E+G L+NL  L+L  N   
Sbjct: 178 QKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFT 237

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
            LP+EIGN   L  L L H+ L  +P  +GNL NL  L L+ N+  ++PE +     L  
Sbjct: 238 TLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQT 297

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            ++    L++LP  +                          +   +  +N   NQ+  +P
Sbjct: 298 LDLNYSRLTTLPKEI-------------------------GKLQKLQKLNLYKNQLKTLP 332

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + +NL  +++  N LT+LP ++G    L EL+LG+NQ++ L E I NL  L+ L 
Sbjct: 333 KEI-GKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEKIGNLQKLQELS 391

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L+ N LK LP  IGNL+ L+ L+L  N+L +LP EI  L+ L+ L L  N L+S P  IG
Sbjct: 392 LAGNRLKTLPKEIGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSLISFPEEIG 451

Query: 493 HLTNLSYLSVGEN 505
            L  L +L +G N
Sbjct: 452 KLQKLKWLYLGGN 464



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/375 (36%), Positives = 210/375 (56%), Gaps = 26/375 (6%)

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N LT+LP  + NLQ L+ L+L  N+L  LP  +  L  L+ L L  NR+ T+  +I  L 
Sbjct: 119 NKLTTLPKEIGNLQNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQ 178

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
            L  L +  N+++ LP E+ +L+ L  L L +N L  LPKEIGN   L  L+L  N+   
Sbjct: 179 KLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTT 238

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P+ +GNL  L +L L+++RL ++P+ +    +L E N+     ++LP+ +  +L  +  
Sbjct: 239 LPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEI-GNLQKLQT 297

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L+ ++ T  P                  +I K+        + L K+N+  N L +LP
Sbjct: 298 LDLNYSRLTTLPK-----------------EIGKL--------QKLQKLNLYKNQLKTLP 332

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  L+L  N+++ L ++I NL NL+ L L +N L  LP  IGNL+KL+ L L
Sbjct: 333 KEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEKIGNLQKLQELSL 392

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+L++LP EIG L+ LQ L L +NQL +LP+ I +L +L  L++  N+L S PEEIG 
Sbjct: 393 AGNRLKTLPKEIGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSLISFPEEIGK 452

Query: 517 LENLHTLYLNDNTCL 531
           L+ L  LYL  N  L
Sbjct: 453 LQKLKWLYLGGNPFL 467



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/370 (36%), Positives = 203/370 (54%), Gaps = 26/370 (7%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           +T LP  +  L +L+EL L GN+L +LP +IG +  L  L L+ N LT+LP  + NLQ+L
Sbjct: 121 LTTLPKEIGNLQNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKL 180

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
           + LDL  N+L  LP  + KL  L+ L+L  N + T+  +I  L NL  L++  N+   LP
Sbjct: 181 QTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLP 240

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            E+G L+ L  L LAH+ L  LPKEIGN   L  L+L  N+   +P+ +GNL  L  L L
Sbjct: 241 EEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDL 300

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           +Y+RL ++P+ + K   L + N+    L +LP   +  L ++ N++L+ N+ T  P    
Sbjct: 301 NYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKE-IGKLQNLKNLSLNGNELTTLPKE-- 357

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                                      +NL ++++  N LT+LP  +G    L EL+L  
Sbjct: 358 -----------------------IGNLQNLQELSLGSNQLTTLPEKIGNLQKLQELSLAG 394

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N++  L ++I NL NL+ L L+NN L  LP  I NL+ L+ L+L  N L S P EIG L+
Sbjct: 395 NRLKTLPKEIGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSLISFPEEIGKLQ 454

Query: 473 ELQRLILQSN 482
           +L+ L L  N
Sbjct: 455 KLKWLYLGGN 464



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/314 (37%), Positives = 176/314 (56%), Gaps = 27/314 (8%)

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+  LP E+G L+NL  L+L  N L  LP+EIGN   L TLDL HN L  +P  +GNL 
Sbjct: 119 NKLTTLPKEIGNLQNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQ 178

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L+ N+L+++P+ + K   L   ++    L++LP   + +L ++  + L+ N+FT
Sbjct: 179 KLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKE-IGNLQNLQELNLNSNQFT 237

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                               + L K+++  + LT+LP ++G    L
Sbjct: 238 TLPEE-------------------------IGNLQKLQKLSLAHSRLTTLPKEIGNLQNL 272

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            ELNL +NQ + L E+I NL  L+ L L+ + L  LP  IG L+KL+ L+L +N+L++LP
Sbjct: 273 QELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLP 332

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            EIG L+ L+ L L  N+L +LP+ IG+L NL  LS+G N L ++PE+IG L+ L  L L
Sbjct: 333 KEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEKIGNLQKLQELSL 392

Query: 526 NDNTCLNNIPFELA 539
             N  L  +P E+ 
Sbjct: 393 AGNR-LKTLPKEIG 405



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/315 (35%), Positives = 167/315 (53%), Gaps = 27/315 (8%)

Query: 247 AHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK 306
             N L  LPKEIGN   L  L+L+ N+L  +P+ +GNL  L  L LS+NRL ++P+ +  
Sbjct: 117 GGNKLTTLPKEIGNLQNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGN 176

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
              L   ++    L +LP  +   L  +  + L  N+ T  P                  
Sbjct: 177 LQKLQTLDLAQNQLKTLPKEI-EKLQKLEALHLGNNELTTLPKE---------------- 219

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
                        +NL ++N+  N  T+LP ++G    L +L+L  ++++ L ++I NL 
Sbjct: 220 ---------IGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQ 270

Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
           NL+ L L++N    LP  IGNL+KL+ LDL  ++L +LP EIG L++LQ+L L  NQL +
Sbjct: 271 NLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKT 330

Query: 487 LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQI 546
           LP+ IG L NL  LS+  N L ++P+EIG L+NL  L L  N  L  +P ++     LQ 
Sbjct: 331 LPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQ-LTTLPEKIGNLQKLQE 389

Query: 547 MSLDNCPLSQIPSEI 561
           +SL    L  +P EI
Sbjct: 390 LSLAGNRLKTLPKEI 404



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 127/219 (57%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL+++ +  LP  +EKL  LE L+L  N+L +LP +IG + NL  L L  N  T+LP+ 
Sbjct: 183 LDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEE 242

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + NLQ+L+ L L H++L  LP  +  L +L+ L L  N+  T+  +I  L  L  L +  
Sbjct: 243 IGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNY 302

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           +++  LP E+G+L+ L  L+L  N L+ LPKEIG    L  L L  NEL  +P  +GNL 
Sbjct: 303 SRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQ 362

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
           NL  L L  N+L ++PE +     L E ++ G  L +LP
Sbjct: 363 NLQELSLGSNQLTTLPEKIGNLQKLQELSLAGNRLKTLP 401



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 178/346 (51%), Gaps = 10/346 (2%)

Query: 88  DLNIEKEFLRCKEENILNL------DLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +LN+E   L    E I NL      DLS + +T LP  +  L  L+ L L  N+L +LP 
Sbjct: 136 ELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPK 195

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
           +I  +  L  L L  N LT+LP  + NLQ L+ L+L  N+   LP  +  L  L+ L L 
Sbjct: 196 EIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLA 255

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            +R+ T+  +I  L NL  L++  N+   LP E+G L+ L TLDL ++ L  LPKEIG  
Sbjct: 256 HSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKL 315

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L  L+L  N+L  +P  +G L NL  L L+ N L ++P+ +    +L E ++    L+
Sbjct: 316 QKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLT 375

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
           +LP+  + +L  +  ++L+ N+    P        ++  +N  +NQ+  +P  I    ++
Sbjct: 376 TLPEK-IGNLQKLQELSLAGNRLKTLPK-EIGNLQNLQELNLNNNQLTTLPKEI-ENLQS 432

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ-ISKLSEDIQNLV 426
           L  +N+  N L S P ++G    L  L LG N  +    E IQ L+
Sbjct: 433 LESLNLSGNSLISFPEEIGKLQKLKWLYLGGNPFLRSQKEKIQKLL 478


>gi|421090942|ref|ZP_15551731.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000269|gb|EKO50914.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 400

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 140/407 (34%), Positives = 219/407 (53%), Gaps = 36/407 (8%)

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE-NSLTSLPDSLANLQQLRVLDLRHNK 181
           L HL++++L+          +    + T +   E  +   L +++ N   +RVLDL   K
Sbjct: 7   LIHLQKVFLFS---------LFLFCSFTFVQAEEPKTYMDLTEAIQNPLDVRVLDLSQQK 57

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L  LP  + +L +L+ LYL +N++KT+  +I  L NL +L +  N+++ LP E+ +LKNL
Sbjct: 58  LKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPEEIEQLKNL 117

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
             L L++N L+ LPKEI     L  L L+ N+L  +P  +G L NL RL L  N+L ++P
Sbjct: 118 QRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLMTLP 177

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
           E + +  +L    +    + ++P  +   L  + ++ L  N+ TA P             
Sbjct: 178 EEIGQLKNLQVLELSYNQIKTIPKEI-EKLQKLQSLGLGNNQLTALP------------- 223

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
               N+I ++        + L ++++  N LT+LP ++G    L +L LG+NQ++ L  +
Sbjct: 224 ----NEIGQL--------QKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNE 271

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           I  L NL+ L L +N L  L   I  L+ LK LDL  N+L + P EI  LK LQ L L S
Sbjct: 272 IGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGS 331

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           NQL +LP+ IG L NL    +  N L ++P+EIG L+NL  LYL DN
Sbjct: 332 NQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDN 378



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 129/366 (35%), Positives = 202/366 (55%), Gaps = 26/366 (7%)

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
           ++  L L++  L +LP  +  LQ L+ L L +N+L  LP  + +L +L++L L  N++KT
Sbjct: 47  DVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKT 106

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
           +  +I+ L NL  L +  N+++ LP E+ +L+NL  L L  N L  LP EIG    L  L
Sbjct: 107 LPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRL 166

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
            L +N+L+ +P+ +G L NL  L LSYN+++++P+ + K   L    +    L++LP+ +
Sbjct: 167 HLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEI 226

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
              L  +  ++LS N+ T  P                 N+I ++        +NL  + +
Sbjct: 227 -GQLQKLQELSLSTNRLTTLP-----------------NEIGQL--------QNLQDLYL 260

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
             N LT LP ++G    L  L L +N+++ LS+DI+ L NL+ L L NN L   P  I  
Sbjct: 261 GSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQ 320

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           L+ L+ LDL  N+L +LP EIG LK LQ   L +NQL +LP+ IG L NL  L + +N L
Sbjct: 321 LKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQL 380

Query: 508 QSIPEE 513
            S  +E
Sbjct: 381 SSEEKE 386



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/358 (33%), Positives = 198/358 (55%), Gaps = 26/358 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + +L +L+ELYL  N+L +LP +IG + NL  L L  N L +LP+ 
Sbjct: 51  LDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPEE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L +N+L  LP  + +L +L+ LYLR N++ T+  +I  L NL  L + +
Sbjct: 111 IEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWN 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL  L+L++N ++ +PKEI     L +L L +N+L  +P+ +G L 
Sbjct: 171 NQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQ 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LS NRL ++P  + +  +L +  +    L+ LP+  +  L ++  + L  N+ T
Sbjct: 231 KLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNE-IGQLKNLQTLYLRSNRLT 289

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                                           + +NL  +++ +N LT+ P ++     L
Sbjct: 290 TLSKD-------------------------IEQLQNLKSLDLWNNQLTTFPKEIEQLKNL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
             L+LG+NQ++ L ++I  L NL+V  L+NN L  LP  IG L+ L+ L L +N+L S
Sbjct: 325 QVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQLSS 382



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/319 (35%), Positives = 173/319 (54%), Gaps = 4/319 (1%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            LDL+   L+ LPKEIG    L  L L +N+L  +P  +G L NL  L L +N+L+++PE
Sbjct: 50  VLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPE 109

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + +  +L    +    L +LP  +   L ++  + L  N+ T  P+    Q  ++  ++
Sbjct: 110 EIEQLKNLQRLYLSYNQLKTLPKEI-RQLQNLQELYLRDNQLTTLPTE-IGQLKNLQRLH 167

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQ+  +P  I  + KNL  + +  N + ++P ++     L  L LG NQ++ L  +I
Sbjct: 168 LWNNQLMTLPEEI-GQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEI 226

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L  L+ L LS N L  LP+ IG L+ L+ L L  N+L  LPNEIG LK LQ L L+SN
Sbjct: 227 GQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSN 286

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           +L +L + I  L NL  L +  N L + P+EI  L+NL  L L  N  L  +P E+    
Sbjct: 287 RLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQ-LTTLPKEIGQLK 345

Query: 543 NLQIMSLDNCPLSQIPSEI 561
           NLQ+  L+N  L+ +P EI
Sbjct: 346 NLQVFELNNNQLTTLPKEI 364



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/309 (34%), Positives = 165/309 (53%), Gaps = 27/309 (8%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L + I N   +  LDL   +L  +P  +G L NL  L LSYN+L+++P+ + +  +L  
Sbjct: 37  DLTEAIQNPLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRV 96

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
             +    L +LP+ +                          Q  ++  +   +NQ+  +P
Sbjct: 97  LELIHNQLKTLPEEI-------------------------EQLKNLQRLYLSYNQLKTLP 131

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + +NL ++ ++DN LT+LP ++G    L  L+L  NQ+  L E+I  L NL+VL 
Sbjct: 132 KEI-RQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLE 190

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           LS N +K +P  I  L+KL+ L L  N+L +LPNEIG L++LQ L L +N+L +LP  IG
Sbjct: 191 LSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIG 250

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L +G N L  +P EIG L+NL TLYL  N  L  +  ++    NL+ + L N 
Sbjct: 251 QLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNR-LTTLSKDIEQLQNLKSLDLWNN 309

Query: 553 PLSQIPSEI 561
            L+  P EI
Sbjct: 310 QLTTFPKEI 318



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 124/212 (58%), Gaps = 5/212 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS + I  +P  +EKL  L+ L L  N+L +LP++IG +  L  L L+ N LT
Sbjct: 184 KNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRLT 243

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L L  N+L  LP  + +L +L+ LYLR NR+ T+  DI+ L NL  
Sbjct: 244 TLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKS 303

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++   P E+ +LKNL  LDL  N L  LPKEIG    L   +L +N+L  +P  
Sbjct: 304 LDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKE 363

Query: 281 LGNLINLTRLRLSYNRL-----ESVPETLSKC 307
           +G L NL  L L  N+L     E + + L KC
Sbjct: 364 IGQLQNLQELYLIDNQLSSEEKERIRKLLPKC 395



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 130/245 (53%), Gaps = 23/245 (9%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCL-------- 152
           +N+  L L  + +T LP  + +L +L+ L+L+ N+L +LP +IG + NL  L        
Sbjct: 138 QNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIK 197

Query: 153 ---------------GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
                          GL  N LT+LP+ +  LQ+L+ L L  N+L  LP  + +L +L+ 
Sbjct: 198 TIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQD 257

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           LYL  N++  +  +I  L NL  L +R N++  L  ++ +L+NL +LDL +N L   PKE
Sbjct: 258 LYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKE 317

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           I     L  LDL  N+L  +P  +G L NL    L+ N+L ++P+ + +  +L E  +  
Sbjct: 318 IEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLID 377

Query: 318 CALSS 322
             LSS
Sbjct: 378 NQLSS 382


>gi|421106546|ref|ZP_15567112.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410008404|gb|EKO62075.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 525

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 151/449 (33%), Positives = 234/449 (52%), Gaps = 26/449 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+L+   +T LP  + +L +L EL L  N+L +LP +I  + NL  L L+EN L  LP+ 
Sbjct: 53  LNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQNLEHLDLSENQLVILPNE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ LDL  NKL  LP  + +L +L++L+   NR+  +  +I  L NL  L++ +
Sbjct: 113 IGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKEIGQLENLENLNLSE 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  +P E+G+LKNL  L L+ N L  LP EIG    L  L+L+ N+LV +P  +G L 
Sbjct: 173 NRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTLPKGIGRLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL------LSSLTSINNITL 339
           NL  L L  NRL  +P    +   L + N+    L  LP  +            +N ++ 
Sbjct: 233 NLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKEIGQLQNLQDLDLLMNPLSF 292

Query: 340 SRNKFTA--YPSG------------------GPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
              K     +P+                      +   V+ ++ E+     +   +  + 
Sbjct: 293 KERKRIQKLFPNCNLDLREVAKDGDYRNLNLAQEEPLKVFELSLEYKDFSHLFPKVILKF 352

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           +NL  +++ D    +LP ++G    L  L LG N +  +  +I  L NLE L L  N+L+
Sbjct: 353 RNLQSLHLYDCGFPTLPKEIGRLKNLKYLTLGLNGLKDIPSEIGQLRNLEALNLEANVLE 412

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
            LP  IG LR L+ L L +NKL+  P  IG LK LQ L L +N+L++LP+ IG L NL  
Sbjct: 413 GLPKEIGQLRNLQKLSLHQNKLKIFPVGIGQLKSLQWLDLSANELITLPKEIGQLENLEN 472

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L++  N L ++ +EIG LENL  L L++N
Sbjct: 473 LNLSNNQLTTLSQEIGQLENLRELNLSNN 501



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 144/450 (32%), Positives = 225/450 (50%), Gaps = 37/450 (8%)

Query: 145 YVTNLTCLGLAE----NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           ++  L+C   AE     +   L  +L N   +RVL+L   KL  LP  + +L +L+ L L
Sbjct: 19  FLITLSCEIQAEEVEPGTYMDLTKALQNPLDVRVLNLNGQKLTSLPREIGQLKNLRELSL 78

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
           ++N++ T+  +I  L NL  L + +N++  LP E+G LKNL +LDL  N L  LPKEIG 
Sbjct: 79  KWNQLVTLPKEIVELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQ 138

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  L    N L  +P  +G L NL  L LS NRL +VP+ + +  +L E ++ G  L
Sbjct: 139 LQNLQMLWSPENRLAILPKEIGQLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQL 198

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            +LP+  +  L ++  + L  N+    P  G  +  ++ +++   N++  +P   F + +
Sbjct: 199 VTLPNE-IGQLRNLQELNLKWNQLVTLPK-GIGRLQNLQTLDLHENRLTILPRE-FGQLQ 255

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLV---NLEVLVLSN- 435
           +L K+N+ +N L  LP ++G    L +L+L  N +S K  + IQ L    NL++  ++  
Sbjct: 256 SLQKLNLVNNRLIILPKEIGQLQNLQDLDLLMNPLSFKERKRIQKLFPNCNLDLREVAKD 315

Query: 436 ------NLLKK------------------LPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
                 NL ++                   P  I   R L+ L L +    +LP EIG L
Sbjct: 316 GDYRNLNLAQEEPLKVFELSLEYKDFSHLFPKVILKFRNLQSLHLYDCGFPTLPKEIGRL 375

Query: 472 KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
           K L+ L L  N L  +P  IG L NL  L++  N L+ +P+EIG L NL  L L+ N  L
Sbjct: 376 KNLKYLTLGLNGLKDIPSEIGQLRNLEALNLEANVLEGLPKEIGQLRNLQKLSLHQNK-L 434

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
              P  +    +LQ + L    L  +P EI
Sbjct: 435 KIFPVGIGQLKSLQWLDLSANELITLPKEI 464



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 100/211 (47%), Gaps = 29/211 (13%)

Query: 103 ILNLDLSKSSITHLPPSVE-KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           +  L L     +HL P V  K  +L+ L+LY     +LP +IG + NL  L L  N L  
Sbjct: 331 VFELSLEYKDFSHLFPKVILKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLTLGLNGLKD 390

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  +  L+ L  L+L  N L  LP                        +I  L NL  L
Sbjct: 391 IPSEIGQLRNLEALNLEANVLEGLP-----------------------KEIGQLRNLQKL 427

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           S+  NK++  P  +G+LK+L  LDL+ N L  LPKEIG    L  L+L +N+L  +   +
Sbjct: 428 SLHQNKLKIFPVGIGQLKSLQWLDLSANELITLPKEIGQLENLENLNLSNNQLTTLSQEI 487

Query: 282 GNLINLTRLRLSYNRL-----ESVPETLSKC 307
           G L NL  L LS N+L     E + + L KC
Sbjct: 488 GQLENLRELNLSNNQLSSEEKERIRKLLPKC 518


>gi|418727710|ref|ZP_13286298.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959068|gb|EKO22845.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 423

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 145/405 (35%), Positives = 215/405 (53%), Gaps = 50/405 (12%)

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L+E  LT+LP  +  LQ L++LDL HN+L  LP  + +L +L++L L +N++     
Sbjct: 50  VLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTA--- 106

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
                               LP E+G+LKNL  L L +N L  LP EI     L  LDL 
Sbjct: 107 --------------------LPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLG 146

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           +N+L  +P  +G L NL  L LSYN+L ++P+ + K  +L   ++    L+ LP  +   
Sbjct: 147 NNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEI--- 203

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
                               G  Q  +++ ++  HNQ+  +P  I  + +NL +  + +N
Sbjct: 204 --------------------GKLQ--NLHELDLSHNQLTILPKEI-GQLQNLQRFVLDNN 240

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            LT LP ++G    L EL LG NQ++ L ++I  L NL+  VL NN    LP  IG L+ 
Sbjct: 241 QLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQN 300

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L+ L L  N+L + P EIG L++LQ L L +NQL +LP  I  L NL  L++ EN L++I
Sbjct: 301 LQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTI 360

Query: 511 PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           P+EIG L+NL  L L++N  L  +P E+    NLQ ++L N   S
Sbjct: 361 PQEIGQLQNLKLLDLSNNQ-LTTLPKEIEQLKNLQTLNLWNNQFS 404



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 138/381 (36%), Positives = 205/381 (53%), Gaps = 26/381 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS+  +T LP  +++L +L+ L L  N+L +LP +IG + NL  L L  N LT+LP  
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VL L +N+L  LP  + +L +L++L L  N++  +  +I  L NL  L +  
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSY 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L+NL  L L  + L  LP+EIG    L  LDL HN+L  +P  +G L 
Sbjct: 171 NQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQ 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL R  L  N+L  +P+ + K  +L+E  +    L+ LP   +  L ++    L  N+FT
Sbjct: 231 NLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKE-IGQLQNLQRFVLDNNQFT 289

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                             + +NL ++ +  N LT+ P ++G    L
Sbjct: 290 ILPKE-------------------------IGQLQNLQELYLSYNQLTTFPKEIGKLQKL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             LNL  NQ++ L E+I+ L NL+ L LS N LK +P  IG L+ LK LDL  N+L +LP
Sbjct: 325 QTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKLLDLSNNQLTTLP 384

Query: 466 NEIGFLKELQRLILQSNQLVS 486
            EI  LK LQ L L +NQ  S
Sbjct: 385 KEIEQLKNLQTLNLWNNQFSS 405



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/337 (35%), Positives = 200/337 (59%), Gaps = 5/337 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  + +L +L+ L LY N+L +LP +IG + NL  L L  N LT
Sbjct: 69  QNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLT 128

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L++LDL +N+L  LP  + +L +L+ LYL +N++ T+  +I  L NL +
Sbjct: 129 TLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQL 188

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+ ++++  LP E+G+L+NL  LDL+HN L  LPKEIG    L    L +N+L  +P  
Sbjct: 189 LSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKE 248

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L +N+L  +P+ + +  +L  F ++    + LP   +  L ++  + LS
Sbjct: 249 IGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKE-IGQLQNLQELYLS 307

Query: 341 RNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
            N+ T +P   G  Q   + ++N  +NQ+  +P  I  + KNL  +N+ +N L ++P ++
Sbjct: 308 YNQLTTFPKEIGKLQ--KLQTLNLWNNQLTTLPEEI-EQLKNLKTLNLSENQLKTIPQEI 364

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
           G    L  L+L  NQ++ L ++I+ L NL+ L L NN
Sbjct: 365 GQLQNLKLLDLSNNQLTTLPKEIEQLKNLQTLNLWNN 401



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/401 (34%), Positives = 208/401 (51%), Gaps = 50/401 (12%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L  +L N   +RVL L   KL  LP  + +L +LK+L L  N++  +  +I  L NL +
Sbjct: 37  DLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQL 96

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+LKNL  L L +N L  LP EI     L  LDL +N+L  +P  
Sbjct: 97  LILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKE 156

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LSYN+L ++P+ + K  +L   ++    L+ LP  +             
Sbjct: 157 IGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEI------------- 203

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
                     G  Q  +++ ++  HNQ+  +P  I  + +NL +  + +N LT LP ++G
Sbjct: 204 ----------GKLQ--NLHELDLSHNQLTILPKEI-GQLQNLQRFVLDNNQLTILPKEIG 250

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L EL LG NQ++ L ++I  L NL+  VL NN    LP  IG L+ L+ L L  N+
Sbjct: 251 KLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQ 310

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L + P EIG L++LQ L L +NQL +LP  I  L NL  L++ EN L++IP+EIG L+NL
Sbjct: 311 LTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNL 370

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                                   +++ L N  L+ +P EI
Sbjct: 371 ------------------------KLLDLSNNQLTTLPKEI 387



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/312 (34%), Positives = 166/312 (53%), Gaps = 10/312 (3%)

Query: 256 KEIGNCTMLVT---LDLQHNELVNIPDM---LGNLINLTRLRLSYNRLESVPETLSKCVH 309
           ++I  C  L+T    +LQ  E     D+   L N +++  L LS  +L ++P+ + +  +
Sbjct: 11  QKISICLFLLTCFIYELQAEEPGTYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQN 70

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
           L   ++    L++LP  +   L ++  + L  N+ TA P     Q  ++  +   +NQ+ 
Sbjct: 71  LKLLDLGHNQLTALPKEI-GQLKNLQLLILYYNQLTALPKE-IGQLKNLKVLFLNNNQLT 128

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
            +P  I  + KNL  +++ +N LT LP ++G    L EL L  NQ++ L ++I  L NL+
Sbjct: 129 TLPTEI-RQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQ 187

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR 489
           +L L  + L  LP  IG L+ L  LDL  N+L  LP EIG L+ LQR +L +NQL  LP+
Sbjct: 188 LLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPK 247

Query: 490 AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
            IG L NL  L +G N L  +P+EIG L+NL    L DN     +P E+    NLQ + L
Sbjct: 248 EIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVL-DNNQFTILPKEIGQLQNLQELYL 306

Query: 550 DNCPLSQIPSEI 561
               L+  P EI
Sbjct: 307 SYNQLTTFPKEI 318



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 169/332 (50%), Gaps = 25/332 (7%)

Query: 252 EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN 311
           ++L K + N   +  L L   +L  +P  +  L NL  L L +N+L ++P+ + +  +L 
Sbjct: 36  QDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQ 95

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG------------GPTQFT--- 356
              +    L++LP   +  L ++  + L+ N+ T  P+             G  Q T   
Sbjct: 96  LLILYYNQLTALPKE-IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILP 154

Query: 357 -------SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
                  ++  +   +NQ+  +P  I  + +NL  +++ ++ LT LP ++G    L EL+
Sbjct: 155 KEIGQLQNLQELYLSYNQLTTLPKEI-GKLENLQLLSLYESQLTILPQEIGKLQNLHELD 213

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           L  NQ++ L ++I  L NL+  VL NN L  LP  IG L+ L  L L  N+L  LP EIG
Sbjct: 214 LSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIG 273

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            L+ LQR +L +NQ   LP+ IG L NL  L +  N L + P+EIG L+ L TL L +N 
Sbjct: 274 QLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQ 333

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L  +P E+    NL+ ++L    L  IP EI
Sbjct: 334 -LTTLPEEIEQLKNLKTLNLSENQLKTIPQEI 364



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 122/224 (54%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  L L +S +T LP  + KL +L EL L  N+L  LP +IG + NL    L  N 
Sbjct: 182 KLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQ 241

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT LP  +  LQ L  L L HN+L  LP  + +L +L+   L  N+   +  +I  L NL
Sbjct: 242 LTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNL 301

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L +  N++   P E+G+L+ L TL+L +N L  LP+EI     L TL+L  N+L  IP
Sbjct: 302 QELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIP 361

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
             +G L NL  L LS N+L ++P+ + +  +L   N+     SS
Sbjct: 362 QEIGQLQNLKLLDLSNNQLTTLPKEIEQLKNLQTLNLWNNQFSS 405



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 94/159 (59%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L L  + +T LP  + +L +L+   L  N+   LP +IG + NL  L L+ N 
Sbjct: 251 KLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQ 310

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+ P  +  LQ+L+ L+L +N+L  LP  + +L +LK L L  N++KT+  +I  L NL
Sbjct: 311 LTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNL 370

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
            +L + +N++  LP E+ +LKNL TL+L +N      KE
Sbjct: 371 KLLDLSNNQLTTLPKEIEQLKNLQTLNLWNNQFSSQEKE 409


>gi|421136056|ref|ZP_15596167.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019790|gb|EKO86604.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
          Length = 424

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 136/367 (37%), Positives = 208/367 (56%), Gaps = 3/367 (0%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N  ++RVLDL   +L  LP+ + +L +L+ LYL +N++  +  +I+ L NL +L
Sbjct: 39  LTKALQNPLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 98

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +R N++  LP E+ +LKNL  LDL  N L  LP+EI     L  L L+ N L  +P+ +
Sbjct: 99  YLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEI 158

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L L  N+L  +P+ + +  +L    +    L++L   +   L ++ ++ LS 
Sbjct: 159 EQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDI-EQLQNLKSLDLSN 217

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P+    Q  ++ S+    NQ    P  I  + +NL  + + +N +T LP ++  
Sbjct: 218 NQLTTLPNEIE-QLKNLKSLYLSENQFATFPKEI-GQLQNLKVLFLNNNQITILPNEIAK 275

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L L  NQ+  L ++I+ L NL+ L LS N L  LP  +G L  L+ LDL  N+L
Sbjct: 276 LKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 335

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
           ++LP EI  LK LQ L L +NQL +LP+ IG L NL +LS+  N L ++P EI  L+NL 
Sbjct: 336 KTLPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQ 395

Query: 522 TLYLNDN 528
           TLYLN+N
Sbjct: 396 TLYLNNN 402



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 136/381 (35%), Positives = 205/381 (53%), Gaps = 26/381 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + +L +L+ LYL+ N+L  LP +I  + NL  L L  N LT+LP+ 
Sbjct: 52  LDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE 111

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VLDL  N+L  LP  + +L +L++LYLR NR+ T+  +I+ L NL +L +  
Sbjct: 112 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGS 171

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+ +LKNL  L L  N L  L K+I     L +LDL +N+L  +P+ +  L 
Sbjct: 172 NQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 231

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L LS N+  + P+ + +  +L    +    ++ LP+  ++ L  +  + LS N+  
Sbjct: 232 NLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNE-IAKLKKLQYLYLSDNQLI 290

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                             + KNL  +++  N LT LP ++G    L
Sbjct: 291 TLPKE-------------------------IEQLKNLKSLDLSYNQLTILPKEVGQLENL 325

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L+L  NQ+  L ++I+ L NL+ L LSNN L  LP  IG L+ L  L L  N+L +LP
Sbjct: 326 QTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLP 385

Query: 466 NEIGFLKELQRLILQSNQLVS 486
           NEI  LK LQ L L +NQ  S
Sbjct: 386 NEIEQLKNLQTLYLNNNQFSS 406



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 189/336 (56%), Gaps = 3/336 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L  + +T LP  +E+L +L+ LYL  N+L +LP++I  + NL  L L  N LT
Sbjct: 70  KNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLT 129

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  L+ L++L LR N+L  LP  + +L +L++L L  N++  +  +I+ L NL +
Sbjct: 130 VLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQL 189

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  L  ++ +L+NL +LDL++N L  LP EI     L +L L  N+    P  
Sbjct: 190 LYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKE 249

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L+ N++  +P  ++K   L    +    L +LP   +  L ++ ++ LS
Sbjct: 250 IGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKE-IEQLKNLKSLDLS 308

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P     Q  ++ +++  +NQ+  +P  I  + KNL  + + +N LT+LP ++G
Sbjct: 309 YNQLTILPKEV-GQLENLQTLDLRNNQLKTLPKEI-EQLKNLQTLFLSNNQLTTLPQEIG 366

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
               L  L+L  NQ++ L  +I+ L NL+ L L+NN
Sbjct: 367 QLQNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 402



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 115/319 (36%), Positives = 169/319 (52%), Gaps = 4/319 (1%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            LDL+   L+ LP EIG    L  L L +N+L  +P  +  L NL  L L  NRL ++P 
Sbjct: 51  VLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPN 110

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + +  +L   ++    L+ LP   +  L ++  + L  N+ T  P+    Q  ++  ++
Sbjct: 111 EIEQLKNLQVLDLGSNQLTVLPQE-IEQLKNLQLLYLRSNRLTTLPNEIE-QLKNLQVLD 168

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
              NQ+  +P  I  + KNL  + +  N LT+L  D+     L  L+L  NQ++ L  +I
Sbjct: 169 LGSNQLTVLPQEI-EQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEI 227

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
           + L NL+ L LS N     P  IG L+ LK L L  N++  LPNEI  LK+LQ L L  N
Sbjct: 228 EQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDN 287

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL++LP+ I  L NL  L +  N L  +P+E+G LENL TL L +N  L  +P E+    
Sbjct: 288 QLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLK 346

Query: 543 NLQIMSLDNCPLSQIPSEI 561
           NLQ + L N  L+ +P EI
Sbjct: 347 NLQTLFLSNNQLTTLPQEI 365



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 148/246 (60%), Gaps = 1/246 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  +E+L +L+ LYL+ N+L +L   I  + NL  L L+ N LT
Sbjct: 162 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 221

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  L+ L+ L L  N+    P  + +L +LK+L+L  N+I  +  +I  L  L  
Sbjct: 222 TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQY 281

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN++  LP E+ +LKNL +LDL++N L  LPKE+G    L TLDL++N+L  +P  
Sbjct: 282 LYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 341

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L LS N+L ++P+ + +  +L   ++    L++LP+  +  L ++  + L+
Sbjct: 342 IEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNE-IEQLKNLQTLYLN 400

Query: 341 RNKFTA 346
            N+F++
Sbjct: 401 NNQFSS 406



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N  +++ LDL   +L++LP EIG LK LQRL L  NQL  LP+ I  L NL 
Sbjct: 37  RDLTKALQNPLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 96

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N L ++P EI  L+NL  L L  N  L  +P E+    NLQ++ L +  L+ +P
Sbjct: 97  LLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQ-LTVLPQEIEQLKNLQLLYLRSNRLTTLP 155

Query: 559 SEI 561
           +EI
Sbjct: 156 NEI 158



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 8/137 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + +  LP  +E+L +L+ L L  N+L  LP ++G + NL  L L  N L +LP  
Sbjct: 282 LYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 341

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L +N+L  LP  + +L +L  L L +N++ T+  +I+ L NL  L + +
Sbjct: 342 IEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 401

Query: 226 N--------KIRELPPE 234
           N        +IR+L P+
Sbjct: 402 NQFSSQEKKRIRKLLPK 418


>gi|418678197|ref|ZP_13239471.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418686545|ref|ZP_13247711.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|418740868|ref|ZP_13297244.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|400321387|gb|EJO69247.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410738978|gb|EKQ83710.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410751463|gb|EKR08440.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 400

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 134/368 (36%), Positives = 203/368 (55%), Gaps = 26/368 (7%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L +++ N   +RVLDL   KL  LP  + +L +L+ LYL +N++KT+  +I  L NL +
Sbjct: 37  DLTEAIQNPLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRV 96

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LP E+ +LKNL  L L++N L+ LPKEI     L  L L+ N+L  +P  
Sbjct: 97  LELIHNQLKTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTE 156

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL RL L  N+L ++PE + +  +L    +    + ++P  +   L  + ++ L 
Sbjct: 157 IGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEI-EKLQKLQSLGLG 215

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ TA P                 N+I ++        + L ++++  N LT+LP ++G
Sbjct: 216 NNQLTALP-----------------NEIGQL--------QKLQELSLSTNRLTTLPNEIG 250

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L +L LG+NQ++ L  +I  L NL+ L L +N L  L   I  L+ LK LDL  N+
Sbjct: 251 QLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQ 310

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L + P EI  LK LQ L L SNQL +LP+ IG L NL    +  N L ++P EIG L+NL
Sbjct: 311 LTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPNEIGQLQNL 370

Query: 521 HTLYLNDN 528
             LYL DN
Sbjct: 371 QELYLIDN 378



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/366 (35%), Positives = 201/366 (54%), Gaps = 26/366 (7%)

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
           ++  L L++  L +LP  +  LQ L+ L L +N+L  LP  + +L +L++L L  N++KT
Sbjct: 47  DVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKT 106

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
           +  +I+ L NL  L +  N+++ LP E+ +L+NL  L L  N L  LP EIG    L  L
Sbjct: 107 LPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRL 166

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
            L +N+L+ +P+ +G L NL  L LSYN+++++P+ + K   L    +    L++LP+ +
Sbjct: 167 HLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEI 226

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
              L  +  ++LS N+ T  P                 N+I ++        +NL  + +
Sbjct: 227 -GQLQKLQELSLSTNRLTTLP-----------------NEIGQL--------QNLQDLYL 260

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
             N LT LP ++G    L  L L +N+++ LS+DI+ L NL+ L L NN L   P  I  
Sbjct: 261 GSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQ 320

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           L+ L+ LDL  N+L +LP EIG LK LQ   L +NQL +LP  IG L NL  L + +N L
Sbjct: 321 LKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPNEIGQLQNLQELYLIDNQL 380

Query: 508 QSIPEE 513
            S  +E
Sbjct: 381 SSEEKE 386



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/358 (33%), Positives = 199/358 (55%), Gaps = 26/358 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + +L +L+ELYL  N+L +LP +IG + NL  L L  N L +LP+ 
Sbjct: 51  LDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPEE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L +N+L  LP  + +L +L+ LYLR N++ T+  +I  L NL  L + +
Sbjct: 111 IEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWN 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL  L+L++N ++ +PKEI     L +L L +N+L  +P+ +G L 
Sbjct: 171 NQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQ 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LS NRL ++P  + +  +L +  +    L+ LP+  +  L ++  + L  N+ T
Sbjct: 231 KLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNE-IGQLKNLQTLYLRSNRLT 289

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                                           + +NL  +++ +N LT+ P ++     L
Sbjct: 290 TLSKD-------------------------IEQLQNLKSLDLWNNQLTTFPKEIEQLKNL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
             L+LG+NQ++ L ++I  L NL+V  L+NN L  LP+ IG L+ L+ L L +N+L S
Sbjct: 325 QVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPNEIGQLQNLQELYLIDNQLSS 382



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/319 (35%), Positives = 174/319 (54%), Gaps = 4/319 (1%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            LDL+   L+ LPKEIG    L  L L +N+L  +P  +G L NL  L L +N+L+++PE
Sbjct: 50  VLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPE 109

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + +  +L    +    L +LP  +   L ++  + L  N+ T  P+    Q  ++  ++
Sbjct: 110 EIEQLKNLQRLYLSYNQLKTLPKEI-RQLQNLQELYLRDNQLTTLPTE-IGQLKNLQRLH 167

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQ+  +P  I  + KNL  + +  N + ++P ++     L  L LG NQ++ L  +I
Sbjct: 168 LWNNQLMTLPEEI-GQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEI 226

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L  L+ L LS N L  LP+ IG L+ L+ L L  N+L  LPNEIG LK LQ L L+SN
Sbjct: 227 GQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSN 286

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           +L +L + I  L NL  L +  N L + P+EI  L+NL  L L  N  L  +P E+    
Sbjct: 287 RLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQ-LTTLPKEIGQLK 345

Query: 543 NLQIMSLDNCPLSQIPSEI 561
           NLQ+  L+N  L+ +P+EI
Sbjct: 346 NLQVFELNNNQLTTLPNEI 364



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 125/212 (58%), Gaps = 5/212 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS + I  +P  +EKL  L+ L L  N+L +LP++IG +  L  L L+ N LT
Sbjct: 184 KNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRLT 243

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L L  N+L  LP  + +L +L+ LYLR NR+ T+  DI+ L NL  
Sbjct: 244 TLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKS 303

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++   P E+ +LKNL  LDL  N L  LPKEIG    L   +L +N+L  +P+ 
Sbjct: 304 LDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPNE 363

Query: 281 LGNLINLTRLRLSYNRL-----ESVPETLSKC 307
           +G L NL  L L  N+L     E + + L KC
Sbjct: 364 IGQLQNLQELYLIDNQLSSEEKERIRKLLPKC 395


>gi|418695046|ref|ZP_13256072.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|409957205|gb|EKO16120.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
          Length = 525

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 151/449 (33%), Positives = 234/449 (52%), Gaps = 26/449 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+L+   +T LP  + +L +L EL L  N+L +LP +I  + NL  L L+EN L  LP+ 
Sbjct: 53  LNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQNLEHLDLSENQLVILPNE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ LDL  NKL  LP  + +L +L++L+   NR+  +  +I  L NL  L++ +
Sbjct: 113 IGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKEIGQLENLENLNLSE 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  +P E+G+LKNL  L L+ N L  LP EIG    L  L+L+ N+LV +P  +G L 
Sbjct: 173 NRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTLPKGIGRLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL------LSSLTSINNITL 339
           NL  L L  NRL  +P    +   L + N+    L  LP  +            +N ++ 
Sbjct: 233 NLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKEIGQLQNLQDLDLLMNPLSF 292

Query: 340 SRNKFTA--YPSG------------------GPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
              K     +P+                      +   V+ ++ E+     +   +  + 
Sbjct: 293 KERKRIQKLFPNCNLDLREVAKDGDYRNLNLAQEEPLKVFELSLEYKDFSHLFPKVILKF 352

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           +NL  +++ D    +LP ++G    L  L LG N +  +  +I  L NLE L L  N+L+
Sbjct: 353 RNLQSLHLYDCGFPTLPKEIGRLKNLKYLALGLNGLKDIPSEIGQLRNLEALNLEANVLE 412

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
            LP  IG LR L+ L L +NKL+  P  IG LK LQ L L +N+L++LP+ IG L NL  
Sbjct: 413 GLPKEIGQLRNLQKLSLHQNKLKIFPVGIGQLKSLQWLDLSANELITLPKEIGQLENLEN 472

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L++  N L ++ +EIG LENL  L L++N
Sbjct: 473 LNLSNNQLTTLSQEIGQLENLRELNLSNN 501



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 144/450 (32%), Positives = 225/450 (50%), Gaps = 37/450 (8%)

Query: 145 YVTNLTCLGLAE----NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           ++  L+C   AE     +   L  +L N   +RVL+L   KL  LP  + +L +L+ L L
Sbjct: 19  FLITLSCEIQAEEVEPGTYMDLTKALQNPLDVRVLNLNGQKLTSLPREIGQLKNLRELSL 78

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
           ++N++ T+  +I  L NL  L + +N++  LP E+G LKNL +LDL  N L  LPKEIG 
Sbjct: 79  KWNQLVTLPKEIVELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQ 138

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  L    N L  +P  +G L NL  L LS NRL +VP+ + +  +L E ++ G  L
Sbjct: 139 LQNLQMLWSPENRLAILPKEIGQLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQL 198

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            +LP+  +  L ++  + L  N+    P  G  +  ++ +++   N++  +P   F + +
Sbjct: 199 VTLPNE-IGQLRNLQELNLKWNQLVTLPK-GIGRLQNLQTLDLHENRLTILPRE-FGQLQ 255

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLV---NLEVLVLSN- 435
           +L K+N+ +N L  LP ++G    L +L+L  N +S K  + IQ L    NL++  ++  
Sbjct: 256 SLQKLNLVNNRLIILPKEIGQLQNLQDLDLLMNPLSFKERKRIQKLFPNCNLDLREVAKD 315

Query: 436 ------NLLKK------------------LPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
                 NL ++                   P  I   R L+ L L +    +LP EIG L
Sbjct: 316 GDYRNLNLAQEEPLKVFELSLEYKDFSHLFPKVILKFRNLQSLHLYDCGFPTLPKEIGRL 375

Query: 472 KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
           K L+ L L  N L  +P  IG L NL  L++  N L+ +P+EIG L NL  L L+ N  L
Sbjct: 376 KNLKYLALGLNGLKDIPSEIGQLRNLEALNLEANVLEGLPKEIGQLRNLQKLSLHQNK-L 434

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
              P  +    +LQ + L    L  +P EI
Sbjct: 435 KIFPVGIGQLKSLQWLDLSANELITLPKEI 464



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 100/211 (47%), Gaps = 29/211 (13%)

Query: 103 ILNLDLSKSSITHLPPSVE-KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           +  L L     +HL P V  K  +L+ L+LY     +LP +IG + NL  L L  N L  
Sbjct: 331 VFELSLEYKDFSHLFPKVILKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLALGLNGLKD 390

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  +  L+ L  L+L  N L  LP                        +I  L NL  L
Sbjct: 391 IPSEIGQLRNLEALNLEANVLEGLP-----------------------KEIGQLRNLQKL 427

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           S+  NK++  P  +G+LK+L  LDL+ N L  LPKEIG    L  L+L +N+L  +   +
Sbjct: 428 SLHQNKLKIFPVGIGQLKSLQWLDLSANELITLPKEIGQLENLENLNLSNNQLTTLSQEI 487

Query: 282 GNLINLTRLRLSYNRL-----ESVPETLSKC 307
           G L NL  L LS N+L     E + + L KC
Sbjct: 488 GQLENLRELNLSNNQLSSEEKERIRKLLPKC 518



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 83/161 (51%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
            P  +   + L+ L L       LP  + +L +LK L L  N +K +  +I  L NL  L
Sbjct: 345 FPKVILKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLALGLNGLKDIPSEIGQLRNLEAL 404

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++  N +  LP E+G+L+NL  L L  N L+  P  IG    L  LDL  NEL+ +P  +
Sbjct: 405 NLEANVLEGLPKEIGQLRNLQKLSLHQNKLKIFPVGIGQLKSLQWLDLSANELITLPKEI 464

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           G L NL  L LS N+L ++ + + +  +L E N+    LSS
Sbjct: 465 GQLENLENLNLSNNQLTTLSQEIGQLENLRELNLSNNQLSS 505


>gi|428164457|gb|EKX33482.1| hypothetical protein GUITHDRAFT_81382, partial [Guillardia theta
           CCMP2712]
          Length = 566

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 158/499 (31%), Positives = 254/499 (50%), Gaps = 50/499 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + I  +P  +  LT L +L L GN+L+SLPS++G +TNL  L +  N    +P  
Sbjct: 19  LSLSDNQIKVIPKEIGMLTALFQLRLNGNQLSSLPSEMGNLTNLQTLWVQNNKFVDVPSE 78

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKI--LYLRFNRIKTVHPDIQYLSNLSMLSM 223
           +  L  L  L +  NK + LP     +TSLK   L+L FN++K +   I  L+ L  L++
Sbjct: 79  IQTLTGLTALSISGNKFSYLPSFFCDMTSLKDLHLWLSFNQLKKLPQAIGQLAGLIRLNV 138

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
            +N+I  LPP++G+L  L  L    N + ++P  IG    L  + L +N L N+P+ +  
Sbjct: 139 ENNQISSLPPQIGQLTTLRELWANDNAITQIPPVIGLLVELREVRLSNNSLSNLPNEVCQ 198

Query: 284 LINLTRLRLSYNRLESVPE-----------------------TLSKCVHLNEFNVEGCAL 320
           L  L +LR+S N++ ++P                         +     L   ++E   L
Sbjct: 199 LGELKQLRISNNQIRALPNNFHLLTSLTELSLSGNPITALPVNIGIFTELKNLDLESNQL 258

Query: 321 SSLPDGL----------------------LSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
            +LP  +                      +  L ++  + L  N+  + PSG  T   ++
Sbjct: 259 KTLPAAIGQLTKLQTLHLQSNNLHDLPNSIRKLKNLEELCLHDNQLESLPSGLWT-LNNL 317

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
            +I+ E+NQ+ +IP  I   A  LS++ +  N LTSLP ++G    L+ LNL  NQ+S L
Sbjct: 318 KTISLENNQLRRIPPEIAGMAY-LSRLQVAYNQLTSLPTNIGLLPALSRLNLEGNQLSLL 376

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
           S  I  L  LE L +  N+++ LP  IGNLR L+ L +  N++++LP E+  L +L+RL 
Sbjct: 377 SPAIGMLTLLEALKVDFNMIQILPPEIGNLRNLEDLSICNNQVKTLPPELFKLTKLRRLA 436

Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFEL 538
           + +N L S+   I  LT L  L    N ++ +P  +G L NL  LYL+DN+ L + P E+
Sbjct: 437 ISNNSLNSISGEISLLTGLQSLVTTGNRIRILPPSLGLLTNLTELYLHDNS-LTHFPEEV 495

Query: 539 ALCSNLQIMSLDNCPLSQI 557
               +L+ ++L+N  L +I
Sbjct: 496 GTMYSLKTITLNNNKLKEI 514



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 147/449 (32%), Positives = 234/449 (52%), Gaps = 8/449 (1%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
            P  +  +  L+ L L  N++  +P +IG +T L  L L  N L+SLP  + NL  L+ L
Sbjct: 6   FPKDIFSIPSLKSLSLSDNQIKVIPKEIGMLTALFQLRLNGNQLSSLPSEMGNLTNLQTL 65

Query: 176 DLRHNKLNELPMVVYKLTSLKILYL---RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            +++NK  ++P  +  LT L  L +   +F+ + +   D+  L +L  L +  N++++LP
Sbjct: 66  WVQNNKFVDVPSEIQTLTGLTALSISGNKFSYLPSFFCDMTSLKDLH-LWLSFNQLKKLP 124

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             +G+L  L+ L++ +N +  LP +IG  T L  L    N +  IP ++G L+ L  +RL
Sbjct: 125 QAIGQLAGLIRLNVENNQISSLPPQIGQLTTLRELWANDNAITQIPPVIGLLVELREVRL 184

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           S N L ++P  + +   L +  +    + +LP+     LTS+  ++LS N  TA P    
Sbjct: 185 SNNSLSNLPNEVCQLGELKQLRISNNQIRALPNN-FHLLTSLTELSLSGNPITALPVNIG 243

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
             FT + +++ E NQ+  +P  I    K L  ++++ N L  LP  +     L EL L  
Sbjct: 244 I-FTELKNLDLESNQLKTLPAAIGQLTK-LQTLHLQSNNLHDLPNSIRKLKNLEELCLHD 301

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           NQ+  L   +  L NL+ + L NN L+++P  I  +  L  L +  N+L SLP  IG L 
Sbjct: 302 NQLESLPSGLWTLNNLKTISLENNQLRRIPPEIAGMAYLSRLQVAYNQLTSLPTNIGLLP 361

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            L RL L+ NQL  L  AIG LT L  L V  N +Q +P EIG L NL  L + +N    
Sbjct: 362 ALSRLNLEGNQLSLLSPAIGMLTLLEALKVDFNMIQILPPEIGNLRNLEDLSICNNQV-K 420

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            +P EL   + L+ +++ N  L+ I  EI
Sbjct: 421 TLPPELFKLTKLRRLAISNNSLNSISGEI 449



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 155/481 (32%), Positives = 243/481 (50%), Gaps = 48/481 (9%)

Query: 104 LNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLP 163
           L+L LS + +  LP ++ +L  L  L +  N+++SLP QIG +T L  L   +N++T +P
Sbjct: 111 LHLWLSFNQLKKLPQAIGQLAGLIRLNVENNQISSLPPQIGQLTTLRELWANDNAITQIP 170

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
             +  L +LR + L +N L+ LP  V +L  LK L +  N+I+ +  +   L++L+ LS+
Sbjct: 171 PVIGLLVELREVRLSNNSLSNLPNEVCQLGELKQLRISNNQIRALPNNFHLLTSLTELSL 230

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
             N I  LP  +G    L  LDL  N L+ LP  IG  T L TL LQ N L ++P+ +  
Sbjct: 231 SGNPITALPVNIGIFTELKNLDLESNQLKTLPAAIGQLTKLQTLHLQSNNLHDLPNSIRK 290

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L NL  L L  N+LES+P  L    +L   ++E   L  +P   ++ +  ++ + ++ N+
Sbjct: 291 LKNLEELCLHDNQLESLPSGLWTLNNLKTISLENNQLRRIPPE-IAGMAYLSRLQVAYNQ 349

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
            T+ P+                  I  +P         LS++N++ N L+ L   +G   
Sbjct: 350 LTSLPTN-----------------IGLLPA--------LSRLNLEGNQLSLLSPAIGMLT 384

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            L  L +  N I  L  +I NL NLE L + NN +K LP  +  L KL+ L +  N L S
Sbjct: 385 LLEALKVDFNMIQILPPEIGNLRNLEDLSICNNQVKTLPPELFKLTKLRRLAISNNSLNS 444

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           +  EI  L  LQ L+   N++  LP ++G LTNL+ L + +N+L   PEE+GT+ +L T+
Sbjct: 445 ISGEISLLTGLQSLVTTGNRIRILPPSLGLLTNLTELYLHDNSLTHFPEEVGTMYSLKTI 504

Query: 524 YLNDN------------TCLNN----------IPFELALCSNLQIMSLDNCPLSQIPSEI 561
            LN+N            T L +          +P  +   S L  ++LD  PLS  P  I
Sbjct: 505 TLNNNKLKEISAGFMRVTSLTSMQLADNKIQIVPTWMWKVSKLSSLNLDGNPLSSPPERI 564

Query: 562 V 562
           +
Sbjct: 565 L 565



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 224/429 (52%), Gaps = 9/429 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ L++  + I+ LPP + +LT L EL+   N +  +P  IG +  L  + L+ NSL++L
Sbjct: 133 LIRLNVENNQISSLPPQIGQLTTLRELWANDNAITQIPPVIGLLVELREVRLSNNSLSNL 192

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+ +  L +L+ L + +N++  LP   + LTSL  L L  N I  +  +I   + L  L 
Sbjct: 193 PNEVCQLGELKQLRISNNQIRALPNNFHLLTSLTELSLSGNPITALPVNIGIFTELKNLD 252

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N+++ LP  +G+L  L TL L  N+L +LP  I     L  L L  N+L ++P  L 
Sbjct: 253 LESNQLKTLPAAIGQLTKLQTLHLQSNNLHDLPNSIRKLKNLEELCLHDNQLESLPSGLW 312

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLS 340
            L NL  + L  N+L  +P  ++   +L+   V    L+SLP   GLL +L+ +N   L 
Sbjct: 313 TLNNLKTISLENNQLRRIPPEIAGMAYLSRLQVAYNQLTSLPTNIGLLPALSRLN---LE 369

Query: 341 RNKFTAY-PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
            N+ +   P+ G    T + ++  + N I  +P  I    +NL  +++ +N + +LP +L
Sbjct: 370 GNQLSLLSPAIG--MLTLLEALKVDFNMIQILPPEI-GNLRNLEDLSICNNQVKTLPPEL 426

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
                L  L +  N ++ +S +I  L  L+ LV + N ++ LP S+G L  L  L L +N
Sbjct: 427 FKLTKLRRLAISNNSLNSISGEISLLTGLQSLVTTGNRIRILPPSLGLLTNLTELYLHDN 486

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
            L   P E+G +  L+ + L +N+L  +      +T+L+ + + +N +Q +P  +  +  
Sbjct: 487 SLTHFPEEVGTMYSLKTITLNNNKLKEISAGFMRVTSLTSMQLADNKIQIVPTWMWKVSK 546

Query: 520 LHTLYLNDN 528
           L +L L+ N
Sbjct: 547 LSSLNLDGN 555



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 199/373 (53%), Gaps = 7/373 (1%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C+   +  L +S + I  LP +   LT L EL L GN + +LP  IG  T L  L L  N
Sbjct: 197 CQLGELKQLRISNNQIRALPNNFHLLTSLTELSLSGNPITALPVNIGIFTELKNLDLESN 256

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L +LP ++  L +L+ L L+ N L++LP  + KL +L+ L L  N+++++   +  L+N
Sbjct: 257 QLKTLPAAIGQLTKLQTLHLQSNNLHDLPNSIRKLKNLEELCLHDNQLESLPSGLWTLNN 316

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  +S+ +N++R +PPE+  +  L  L +A+N L  LP  IG    L  L+L+ N+L  +
Sbjct: 317 LKTISLENNQLRRIPPEIAGMAYLSRLQVAYNQLTSLPTNIGLLPALSRLNLEGNQLSLL 376

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
              +G L  L  L++ +N ++ +P  +    +L + ++    + +LP  L   LT +  +
Sbjct: 377 SPAIGMLTLLEALKVDFNMIQILPPEIGNLRNLEDLSICNNQVKTLPPELF-KLTKLRRL 435

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP--YGIFSRAKNLSKVNMKDNLLTSL 395
            +S N   +  SG  +  T + S+    N+I  +P   G+ +   NL+++ + DN LT  
Sbjct: 436 AISNNSLNSI-SGEISLLTGLQSLVTTGNRIRILPPSLGLLT---NLTELYLHDNSLTHF 491

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++GT   L  + L  N++ ++S     + +L  + L++N ++ +P+ +  + KL  L+
Sbjct: 492 PEEVGTMYSLKTITLNNNKLKEISAGFMRVTSLTSMQLADNKIQIVPTWMWKVSKLSSLN 551

Query: 456 LEENKLESLPNEI 468
           L+ N L S P  I
Sbjct: 552 LDGNPLSSPPERI 564



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 92/196 (46%), Gaps = 26/196 (13%)

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
            P D+ +   L  L+L  NQI  + ++I  L  L  L L+ N L  LPS +GNL  L+ L
Sbjct: 6   FPKDIFSIPSLKSLSLSDNQIKVIPKEIGMLTALFQLRLNGNQLSSLPSEMGNLTNLQTL 65

Query: 455 DLEENKLESLPNEIGFLKELQ-------------------------RLILQSNQLVSLPR 489
            ++ NK   +P+EI  L  L                           L L  NQL  LP+
Sbjct: 66  WVQNNKFVDVPSEIQTLTGLTALSISGNKFSYLPSFFCDMTSLKDLHLWLSFNQLKKLPQ 125

Query: 490 AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
           AIG L  L  L+V  N + S+P +IG L  L  L+ NDN  +  IP  + L   L+ + L
Sbjct: 126 AIGQLAGLIRLNVENNQISSLPPQIGQLTTLRELWANDN-AITQIPPVIGLLVELREVRL 184

Query: 550 DNCPLSQIPSEIVVGG 565
            N  LS +P+E+   G
Sbjct: 185 SNNSLSNLPNEVCQLG 200


>gi|428174569|gb|EKX43464.1| hypothetical protein GUITHDRAFT_87793 [Guillardia theta CCMP2712]
          Length = 622

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 149/472 (31%), Positives = 233/472 (49%), Gaps = 50/472 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+L  + +  +PP++ +   ++ L+L+ N L  +  +IG + NL  L L  N L  +P  
Sbjct: 69  LELDANQLVKIPPAIGEFQSMKSLFLHNNCLVQIAPEIGQLGNLKVLLLQGNRLHEVPLE 128

Query: 166 LANLQQLRVLDLR-HNKLNELPMVVYKLTSLKILYLR-FNRIKTVHPDIQYLSNLSMLSM 223
           L +   L  L+L+ +NKL  LPM V +LT L  L++   N + ++     Y+  L+ LS+
Sbjct: 129 LCSCTALTTLNLQDNNKLQSLPMKVGRLTGLTRLFIADGNLLDSLPASFSYIETLTHLSL 188

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
            DN I ++P + G  K L  LDLA N LE L  EIG+   L  ++L  N++V+IP   G 
Sbjct: 189 ADNNISDIPSDFGNFKALHHLDLAGNQLEALAPEIGHVISLSRVNLARNKIVSIPFEWGL 248

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN--ITLSR 341
           L NL+ L LS N + S+P+ L +   L   +V+   L+SLP  L   LT++ +  +  S 
Sbjct: 249 LSNLSELDLSGNPISSIPQELGQLTALECLHVDRNPLTSLPRSL-CHLTNLRDLVVQFSN 307

Query: 342 NKFTAYPSG-----------------------GPTQFTSVYSINFEHNQIDKIPYGI--- 375
           N+ T+ P                           +  T++   N + NQI  +P  +   
Sbjct: 308 NRLTSLPPSLFDGMKSLRKLLANNNRISRLPDNVSSLTTLQLFNLDDNQISSLPDSLCLL 367

Query: 376 -------------------FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS 416
                              F     L   N+  N L  LP  L + V L  LN+  N+I 
Sbjct: 368 YDLQTLSLSHNELTSIPDQFGLLTGLVSCNLSSNKLQGLPASLSSLVSLQTLNVQENKIK 427

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
            L ++   L +L  L L NN+++ L   I  L+ L+ L +  NKL +LP EI  L++L+ 
Sbjct: 428 SLPDNCSRLTSLRSLNLDNNVIELLSPEISQLKVLQTLRMRHNKLRTLPWEIAQLEQLRH 487

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L L  N+L+ LP  +G LT++  L + +N+L+S+P  IG L NL  L L DN
Sbjct: 488 LDLGENRLMQLPAVVGTLTSVVSLLLDKNSLESLPNSIGDLTNLEKLCLEDN 539



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 157/488 (32%), Positives = 248/488 (50%), Gaps = 38/488 (7%)

Query: 94  EFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLY-GNKLASLPSQIGYVTNLTCL 152
           E   C     LNL    + +  LP  V +LT L  L++  GN L SLP+   Y+  LT L
Sbjct: 128 ELCSCTALTTLNLQ-DNNKLQSLPMKVGRLTGLTRLFIADGNLLDSLPASFSYIETLTHL 186

Query: 153 GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
            LA+N+++ +P    N + L  LDL  N+L  L   +  + SL  + L  N+I ++  + 
Sbjct: 187 SLADNNISDIPSDFGNFKALHHLDLAGNQLEALAPEIGHVISLSRVNLARNKIVSIPFEW 246

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ-- 270
             LSNLS L +  N I  +P ELG+L  L  L +  N L  LP+ + + T L  L +Q  
Sbjct: 247 GLLSNLSELDLSGNPISSIPQELGQLTALECLHVDRNPLTSLPRSLCHLTNLRDLVVQFS 306

Query: 271 HNELVNIP-DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
           +N L ++P  +   + +L +L  + NR+  +P+ +S    L  FN++   +SSLPD L  
Sbjct: 307 NNRLTSLPPSLFDGMKSLRKLLANNNRISRLPDNVSSLTTLQLFNLDDNQISSLPDSL-C 365

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQF---TSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
            L  +  ++LS N+ T+ P     QF   T + S N   N++  +P  + S   +L  +N
Sbjct: 366 LLYDLQTLSLSHNELTSIPD----QFGLLTGLVSCNLSSNKLQGLPASL-SSLVSLQTLN 420

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           +++N + SLP +      L  LNL  N I  LS +I  L  L+ L + +N L+ LP  I 
Sbjct: 421 VQENKIKSLPDNCSRLTSLRSLNLDNNVIELLSPEISQLKVLQTLRMRHNKLRTLPWEIA 480

Query: 447 NLRKLKCLDLEENKL-----------------------ESLPNEIGFLKELQRLILQSNQ 483
            L +L+ LDL EN+L                       ESLPN IG L  L++L L+ NQ
Sbjct: 481 QLEQLRHLDLGENRLMQLPAVVGTLTSVVSLLLDKNSLESLPNSIGDLTNLEKLCLEDNQ 540

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
           L  LP     L++L+YL +  N ++ +P +I  +++L   Y   N  ++ +P  ++LC+ 
Sbjct: 541 LQLLPPTFPSLSSLTYLDLSLNKIKFLPNQINRMKSLQEAYFQRNE-ISILPSSISLCTG 599

Query: 544 LQIMSLDN 551
           L  ++L N
Sbjct: 600 LHTLNLAN 607



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 154/508 (30%), Positives = 250/508 (49%), Gaps = 53/508 (10%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E ++++ LS + +   P S+  L  L  L L  N+L  +P  IG   ++  L L  N L 
Sbjct: 41  ERLVSIKLSNNDLVEFPSSLRSLKLLHTLELDANQLVKIPPAIGEFQSMKSLFLHNNCLV 100

Query: 161 SLPDSLANLQQLRVLDLRHNKLNE------------------------LPMVVYKLTSLK 196
            +   +  L  L+VL L+ N+L+E                        LPM V +LT L 
Sbjct: 101 QIAPEIGQLGNLKVLLLQGNRLHEVPLELCSCTALTTLNLQDNNKLQSLPMKVGRLTGLT 160

Query: 197 ILYLR-FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
            L++   N + ++     Y+  L+ LS+ DN I ++P + G  K L  LDLA N LE L 
Sbjct: 161 RLFIADGNLLDSLPASFSYIETLTHLSLADNNISDIPSDFGNFKALHHLDLAGNQLEALA 220

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
            EIG+   L  ++L  N++V+IP   G L NL+ L LS N + S+P+ L +   L   +V
Sbjct: 221 PEIGHVISLSRVNLARNKIVSIPFEWGLLSNLSELDLSGNPISSIPQELGQLTALECLHV 280

Query: 316 EGCALSSLPDGLLSSLTSINN--ITLSRNKFTAYPSG----------------------- 350
           +   L+SLP   L  LT++ +  +  S N+ T+ P                         
Sbjct: 281 DRNPLTSLPRS-LCHLTNLRDLVVQFSNNRLTSLPPSLFDGMKSLRKLLANNNRISRLPD 339

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
             +  T++   N + NQI  +P  +     +L  +++  N LTS+P   G   GL   NL
Sbjct: 340 NVSSLTTLQLFNLDDNQISSLPDSL-CLLYDLQTLSLSHNELTSIPDQFGLLTGLVSCNL 398

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
            +N++  L   + +LV+L+ L +  N +K LP +   L  L+ L+L+ N +E L  EI  
Sbjct: 399 SSNKLQGLPASLSSLVSLQTLNVQENKIKSLPDNCSRLTSLRSLNLDNNVIELLSPEISQ 458

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           LK LQ L ++ N+L +LP  I  L  L +L +GEN L  +P  +GTL ++ +L L+ N+ 
Sbjct: 459 LKVLQTLRMRHNKLRTLPWEIAQLEQLRHLDLGENRLMQLPAVVGTLTSVVSLLLDKNS- 517

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L ++P  +   +NL+ + L++  L  +P
Sbjct: 518 LESLPNSIGDLTNLEKLCLEDNQLQLLP 545



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 143/489 (29%), Positives = 240/489 (49%), Gaps = 55/489 (11%)

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           KL+SLP QI     L  + L+ N L   P SL +L+ L  L+L  N+L ++P  + +  S
Sbjct: 29  KLSSLPQQIRLSERLVSIKLSNNDLVEFPSSLRSLKLLHTLELDANQLVKIPPAIGEFQS 88

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD--------- 245
           +K L+L  N +  + P+I  L NL +L ++ N++ E+P EL     L TL+         
Sbjct: 89  MKSLFLHNNCLVQIAPEIGQLGNLKVLLLQGNRLHEVPLELCSCTALTTLNLQDNNKLQS 148

Query: 246 ---------------------------------------LAHNHLEELPKEIGNCTMLVT 266
                                                  LA N++ ++P + GN   L  
Sbjct: 149 LPMKVGRLTGLTRLFIADGNLLDSLPASFSYIETLTHLSLADNNISDIPSDFGNFKALHH 208

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           LDL  N+L  +   +G++I+L+R+ L+ N++ S+P       +L+E ++ G  +SS+P  
Sbjct: 209 LDLAGNQLEALAPEIGHVISLSRVNLARNKIVSIPFEWGLLSNLSELDLSGNPISSIPQE 268

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYS--INFEHNQIDKIPYGIFSRAKNLSK 384
            L  LT++  + + RN  T+ P       T++    + F +N++  +P  +F   K+L K
Sbjct: 269 -LGQLTALECLHVDRNPLTSLPRSL-CHLTNLRDLVVQFSNNRLTSLPPSLFDGMKSLRK 326

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
           +   +N ++ LP ++ +   L   NL  NQIS L + +  L +L+ L LS+N L  +P  
Sbjct: 327 LLANNNRISRLPDNVSSLTTLQLFNLDDNQISSLPDSLCLLYDLQTLSLSHNELTSIPDQ 386

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
            G L  L   +L  NKL+ LP  +  L  LQ L +Q N++ SLP     LT+L  L++  
Sbjct: 387 FGLLTGLVSCNLSSNKLQGLPASLSSLVSLQTLNVQENKIKSLPDNCSRLTSLRSLNLDN 446

Query: 505 NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVG 564
           N ++ +  EI  L+ L TL +  N  L  +P+E+A    L+ + L    L Q+P+  VVG
Sbjct: 447 NVIELLSPEISQLKVLQTLRMRHNK-LRTLPWEIAQLEQLRHLDLGENRLMQLPA--VVG 503

Query: 565 GPSLIIRYL 573
             + ++  L
Sbjct: 504 TLTSVVSLL 512



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 135/434 (31%), Positives = 228/434 (52%), Gaps = 6/434 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E + +L L+ ++I+ +P        L  L L GN+L +L  +IG+V +L+ + LA N + 
Sbjct: 181 ETLTHLSLADNNISDIPSDFGNFKALHHLDLAGNQLEALAPEIGHVISLSRVNLARNKIV 240

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS- 219
           S+P     L  L  LDL  N ++ +P  + +LT+L+ L++  N + ++   + +L+NL  
Sbjct: 241 SIPFEWGLLSNLSELDLSGNPISSIPQELGQLTALECLHVDRNPLTSLPRSLCHLTNLRD 300

Query: 220 -MLSMRDNKIRELPPELGE-LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
            ++   +N++  LPP L + +K+L  L   +N +  LP  + + T L   +L  N++ ++
Sbjct: 301 LVVQFSNNRLTSLPPSLFDGMKSLRKLLANNNRISRLPDNVSSLTTLQLFNLDDNQISSL 360

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           PD L  L +L  L LS+N L S+P+       L   N+    L  LP  L SSL S+  +
Sbjct: 361 PDSLCLLYDLQTLSLSHNELTSIPDQFGLLTGLVSCNLSSNKLQGLPASL-SSLVSLQTL 419

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            +  NK  + P    ++ TS+ S+N ++N I+ +   I S+ K L  + M+ N L +LP 
Sbjct: 420 NVQENKIKSLPDNC-SRLTSLRSLNLDNNVIELLSPEI-SQLKVLQTLRMRHNKLRTLPW 477

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++     L  L+LG N++ +L   +  L ++  L+L  N L+ LP+SIG+L  L+ L LE
Sbjct: 478 EIAQLEQLRHLDLGENRLMQLPAVVGTLTSVVSLLLDKNSLESLPNSIGDLTNLEKLCLE 537

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
           +N+L+ LP     L  L  L L  N++  LP  I  + +L       N +  +P  I   
Sbjct: 538 DNQLQLLPPTFPSLSSLTYLDLSLNKIKFLPNQINRMKSLQEAYFQRNEISILPSSISLC 597

Query: 518 ENLHTLYLNDNTCL 531
             LHTL L +N  L
Sbjct: 598 TGLHTLNLANNQVL 611



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 109/205 (53%), Gaps = 2/205 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++ ++ I  LP +  +LT L  L L  N +  L  +I  +  L  L +  N L +LP  
Sbjct: 419 LNVQENKIKSLPDNCSRLTSLRSLNLDNNVIELLSPEISQLKVLQTLRMRHNKLRTLPWE 478

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +A L+QLR LDL  N+L +LP VV  LTS+  L L  N ++++   I  L+NL  L + D
Sbjct: 479 IAQLEQLRHLDLGENRLMQLPAVVGTLTSVVSLLLDKNSLESLPNSIGDLTNLEKLCLED 538

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+++ LPP    L +L  LDL+ N ++ LP +I     L     Q NE+  +P  +    
Sbjct: 539 NQLQLLPPTFPSLSSLTYLDLSLNKIKFLPNQINRMKSLQEAYFQRNEISILPSSISLCT 598

Query: 286 NLTRLRLSYNRLESVPETLSKCVHL 310
            L  L L+ N++  + E  S+ +H+
Sbjct: 599 GLHTLNLANNQV--LFEVSSQALHI 621



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 1/108 (0%)

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L  E  KL SLP +I   + L  + L +N LV  P ++  L  L  L +  N L  IP  
Sbjct: 23  LHWESLKLSSLPQQIRLSERLVSIKLSNNDLVEFPSSLRSLKLLHTLELDANQLVKIPPA 82

Query: 514 IGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           IG  +++ +L+L++N CL  I  E+    NL+++ L    L ++P E+
Sbjct: 83  IGEFQSMKSLFLHNN-CLVQIAPEIGQLGNLKVLLLQGNRLHEVPLEL 129


>gi|348578535|ref|XP_003475038.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1-like [Cavia porcellus]
          Length = 871

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 248/505 (49%), Gaps = 54/505 (10%)

Query: 107 DLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS-QIGYVTNLTCLGLAENSLTSLPDS 165
           D+S + I+H+P  +    ++ +L+L  N + + PS  +G + NL  L +++N L  +PD 
Sbjct: 229 DVSHNQISHMPKEILHHENIRQLFLNDNYIENFPSPGVGSLRNLEILNVSKNKLRHIPDG 288

Query: 166 LANLQQLRVLDLRHNKL-----------------------NELPMVVYKLTSLKILYLRF 202
           L NLQ LR+LD+ +NKL                         LP  + +L +L+IL L  
Sbjct: 289 LPNLQNLRILDMEYNKLTIFPKALCFLPKLISLNLVGNMIGSLPKEIRELKNLEILLLDH 348

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N++  +  +I  LS +  L + DNK+  + P++   K L  L L  N L+ +P+ I  C 
Sbjct: 349 NKLTFLAVEIFQLSKIKELKLADNKLEVISPKIENFKELRILILDKNLLKNIPERISYCV 408

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           ML  L L  N+L+++P  +  L NL +L ++ N +  + E +S   ++      G  + +
Sbjct: 409 MLECLSLSDNKLIDLPKNIYKLKNLRKLHVNRNSIVGITEDISHLTNICSLEFSGNMIKN 468

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P   + +   +  + L+ NK   +P  G     S+Y ++F  N I +IP  + S +K L
Sbjct: 469 VPIE-IKNCRKLTKVELNYNKILQFPV-GLCALDSLYYLSFNGNSISQIPADV-SFSKQL 525

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + + +N L      L + + L  LNLG NQI K+   I N+++L VL+L +N  +  P
Sbjct: 526 LHLELNENKLLVFADHLCSLMNLKFLNLGKNQIEKIPPSISNMISLHVLILCSNKFEIFP 585

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ------------------- 483
             +  L  L+ LDL EN+L+++P+EI  LK +Q+L   SNQ                   
Sbjct: 586 KELCTLENLQVLDLSENQLQTIPSEIRNLKGVQKLNFSSNQFTRFPTELCQLQSLEELDI 645

Query: 484 -------LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
                  L  LP  + ++T L  L +  N ++ IP  IG L +L + Y  +N  ++ +P 
Sbjct: 646 SQANGTKLTRLPEELSNMTQLKKLDISNNAIREIPTNIGELRSLVSFYACNNQ-ISYLPP 704

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEI 561
                  LQ ++L    L+ +PS I
Sbjct: 705 SFLTLKELQQLNLSGNNLTALPSAI 729



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 228/490 (46%), Gaps = 75/490 (15%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++SK+ + H+P  +  L +L  L +  NKL   P  + ++  L  L L  N + SLP  
Sbjct: 275 LNVSKNKLRHIPDGLPNLQNLRILDMEYNKLTIFPKALCFLPKLISLNLVGNMIGSLPKE 334

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ------------ 213
           +  L+ L +L L HNKL  L + +++L+ +K L L  N+++ + P I+            
Sbjct: 335 IRELKNLEILLLDHNKLTFLAVEIFQLSKIKELKLADNKLEVISPKIENFKELRILILDK 394

Query: 214 -----------YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
                      Y   L  LS+ DNK+ +LP  + +LKNL  L +  N +  + ++I + T
Sbjct: 395 NLLKNIPERISYCVMLECLSLSDNKLIDLPKNIYKLKNLRKLHVNRNSIVGITEDISHLT 454

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            + +L+   N + N+P  + N   LT++ L+YN++   P  L     L   +  G ++S 
Sbjct: 455 NICSLEFSGNMIKNVPIEIKNCRKLTKVELNYNKILQFPVGLCALDSLYYLSFNGNSISQ 514

Query: 323 LPDGL---------------------------------------------LSSLTSINNI 337
           +P  +                                             +S++ S++ +
Sbjct: 515 IPADVSFSKQLLHLELNENKLLVFADHLCSLMNLKFLNLGKNQIEKIPPSISNMISLHVL 574

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            L  NKF  +P    T   ++  ++   NQ+  IP  I    K + K+N   N  T  P 
Sbjct: 575 ILCSNKFEIFPKELCT-LENLQVLDLSENQLQTIPSEI-RNLKGVQKLNFSSNQFTRFPT 632

Query: 398 DLGTWVGLTELNL----GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +L     L EL++    GT ++++L E++ N+  L+ L +SNN ++++P++IG LR L  
Sbjct: 633 ELCQLQSLEELDISQANGT-KLTRLPEELSNMTQLKKLDISNNAIREIPTNIGELRSLVS 691

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
                N++  LP     LKELQ+L L  N L +LP AI +L +L  +   +N L   P E
Sbjct: 692 FYACNNQISYLPPSFLTLKELQQLNLSGNNLTALPSAIHNLVSLKEIKFDDNPLLRPPME 751

Query: 514 IGTLENLHTL 523
           I   + L+T+
Sbjct: 752 ICEGKQLYTI 761


>gi|421099974|ref|ZP_15560616.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796955|gb|EKR99072.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 398

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/338 (36%), Positives = 196/338 (57%), Gaps = 4/338 (1%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
           +++ +L ++ N++  LP ++G+L+NL  LDL +N L  LPKEI +   L  L L HN+L 
Sbjct: 40  TDVRILDLKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKLT 99

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           ++P  + +L  L  L L YN+L ++P+ +     L E +++   L++LP  +   L  + 
Sbjct: 100 SLPKDIEHLKELQELHLDYNQLTTLPKDIEHLKELQELHLDYNQLTTLPKEI-GYLKELQ 158

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + L  N+ T  P         +  ++   NQ+  +P  I    K L  +++ DN LT+L
Sbjct: 159 VLHLYDNQLTTLPKEIGY-LKELQVLHLYDNQLTTLPKEI-GYLKELQVLHLYDNQLTTL 216

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L  L L  NQ+  L ++I  L NL+VL LS+N L  LP+ IG L+ L+ L 
Sbjct: 217 PKEIGKLQNLQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPNDIGKLQNLQELY 276

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L  N+L +LP +IG+LKELQ L L +NQL +LP+ IG L NL  L++  N L ++P++IG
Sbjct: 277 LTNNQLTTLPKDIGYLKELQILELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIG 336

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
            L+NL  LYL +N  L  +P ++     LQI+ LD+ P
Sbjct: 337 KLQNLQELYLTNNQ-LTTLPKDIGYLKELQILHLDDIP 373



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 127/347 (36%), Positives = 184/347 (53%), Gaps = 26/347 (7%)

Query: 131 LYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVY 190
           L  N+L +LP  IG + NL  L L  N LT+LP  + +L++L+VL L HNKL  LP  + 
Sbjct: 47  LKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKLTSLPKDIE 106

Query: 191 KLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
            L  L+ L+L +N++ T+  DI++L  L  L +  N++  LP E+G LK L  L L  N 
Sbjct: 107 HLKELQELHLDYNQLTTLPKDIEHLKELQELHLDYNQLTTLPKEIGYLKELQVLHLYDNQ 166

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           L  LPKEIG    L  L L  N+L  +P  +G L  L  L L  N+L ++P+ + K  +L
Sbjct: 167 LTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGKLQNL 226

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK 370
               +    L +LP   +  L ++  + LS NK T  P+                     
Sbjct: 227 QVLELTNNQLKTLPKE-IGQLQNLQVLNLSHNKLTTLPND-------------------- 265

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
                  + +NL ++ + +N LT+LP D+G    L  L L  NQ+  L ++I  L NL+V
Sbjct: 266 -----IGKLQNLQELYLTNNQLTTLPKDIGYLKELQILELTNNQLKTLPKEIGQLQNLQV 320

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L LS+N L  LP  IG L+ L+ L L  N+L +LP +IG+LKELQ L
Sbjct: 321 LNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTLPKDIGYLKELQIL 367



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 118/335 (35%), Positives = 188/335 (56%), Gaps = 3/335 (0%)

Query: 193 TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLE 252
           T ++IL L+ N++ T+  DI  L NL +L + +N++  LP E+  LK L  L L+HN L 
Sbjct: 40  TDVRILDLKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKLT 99

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
            LPK+I +   L  L L +N+L  +P  + +L  L  L L YN+L ++P+ +     L  
Sbjct: 100 SLPKDIEHLKELQELHLDYNQLTTLPKDIEHLKELQELHLDYNQLTTLPKEIGYLKELQV 159

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            ++    L++LP  +   L  +  + L  N+ T  P         +  ++   NQ+  +P
Sbjct: 160 LHLYDNQLTTLPKEI-GYLKELQVLHLYDNQLTTLPKEIGY-LKELQVLHLYDNQLTTLP 217

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + +NL  + + +N L +LP ++G    L  LNL  N+++ L  DI  L NL+ L 
Sbjct: 218 KEI-GKLQNLQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPNDIGKLQNLQELY 276

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L+NN L  LP  IG L++L+ L+L  N+L++LP EIG L+ LQ L L  N+L +LP+ IG
Sbjct: 277 LTNNQLTTLPKDIGYLKELQILELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIG 336

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
            L NL  L +  N L ++P++IG L+ L  L+L+D
Sbjct: 337 KLQNLQELYLTNNQLTTLPKDIGYLKELQILHLDD 371



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 189/353 (53%), Gaps = 26/353 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL  + +T LP  + +L +L+ L L  N+L +LP +I ++  L  L L+ N LTSLP  
Sbjct: 45  LDLKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKLTSLPKD 104

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + +L++L+ L L +N+L  LP  +  L  L+ L+L +N++ T+  +I YL  L +L + D
Sbjct: 105 IEHLKELQELHLDYNQLTTLPKDIEHLKELQELHLDYNQLTTLPKEIGYLKELQVLHLYD 164

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G LK L  L L  N L  LPKEIG    L  L L  N+L  +P  +G L 
Sbjct: 165 NQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGKLQ 224

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L+ N+L+++P+ + +  +L   N+    L++LP+  +  L ++  + L+ N+ T
Sbjct: 225 NLQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPND-IGKLQNLQELYLTNNQLT 283

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                               K L  + + +N L +LP ++G    L
Sbjct: 284 TLPKD-------------------------IGYLKELQILELTNNQLKTLPKEIGQLQNL 318

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
             LNL  N+++ L +DI  L NL+ L L+NN L  LP  IG L++L+ L L++
Sbjct: 319 QVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTLPKDIGYLKELQILHLDD 371



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/351 (33%), Positives = 183/351 (52%), Gaps = 28/351 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL+ + +T LP  +E L  L+ L+L  NKL SLP  I ++  L  L L  N LT
Sbjct: 63  QNLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKLTSLPKDIEHLKELQELHLDYNQLT 122

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  + +L++L+ L L +N+L  LP  +  L  L++L+L  N++ T+  +I YL  L +
Sbjct: 123 TLPKDIEHLKELQELHLDYNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQV 182

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN++  LP E+G LK L  L L  N L  LPKEIG    L  L+L +N+L  +P  
Sbjct: 183 LHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGKLQNLQVLELTNNQLKTLPKE 242

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LS+N+L ++P  + K  +L E  +    L++LP   +  L  +  + L+
Sbjct: 243 IGQLQNLQVLNLSHNKLTTLPNDIGKLQNLQELYLTNNQLTTLPKD-IGYLKELQILELT 301

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P                             + +NL  +N+  N LT+LP D+G
Sbjct: 302 NNQLKTLPKE-------------------------IGQLQNLQVLNLSHNKLTTLPKDIG 336

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
               L EL L  NQ++ L +DI  L  L++L L +  +  L S    +RKL
Sbjct: 337 KLQNLQELYLTNNQLTTLPKDIGYLKELQILHLDD--IPALRSQEKKIRKL 385



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/232 (38%), Positives = 142/232 (61%), Gaps = 2/232 (0%)

Query: 93  KEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCL 152
           K+    KE   L+LD ++  +T LP  +  L  L+ L+LY N+L +LP +IGY+  L  L
Sbjct: 126 KDIEHLKELQELHLDYNQ--LTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVL 183

Query: 153 GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
            L +N LT+LP  +  L++L+VL L  N+L  LP  + KL +L++L L  N++KT+  +I
Sbjct: 184 HLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGKLQNLQVLELTNNQLKTLPKEI 243

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L NL +L++  NK+  LP ++G+L+NL  L L +N L  LPK+IG    L  L+L +N
Sbjct: 244 GQLQNLQVLNLSHNKLTTLPNDIGKLQNLQELYLTNNQLTTLPKDIGYLKELQILELTNN 303

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
           +L  +P  +G L NL  L LS+N+L ++P+ + K  +L E  +    L++LP
Sbjct: 304 QLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTLP 355



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/142 (42%), Positives = 85/142 (59%), Gaps = 8/142 (5%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS + +T LP  + KL +L+ELYL  N+L +LP  IGY+  L  L L  N L 
Sbjct: 247 QNLQVLNLSHNKLTTLPNDIGKLQNLQELYLTNNQLTTLPKDIGYLKELQILELTNNQLK 306

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ L+VL+L HNKL  LP  + KL +L+ LYL  N++ T+  DI YL  L +
Sbjct: 307 TLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTLPKDIGYLKELQI 366

Query: 221 LSMRD--------NKIRELPPE 234
           L + D         KIR+L PE
Sbjct: 367 LHLDDIPALRSQEKKIRKLLPE 388



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 86/144 (59%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L+E +QN  ++ +L L +N L  LP  IG L+ L+ LDL  N+L +LP EI  LKELQ L
Sbjct: 32  LTEALQNPTDVRILDLKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKELQVL 91

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L  N+L SLP+ I HL  L  L +  N L ++P++I  L+ L  L+L+ N  L  +P E
Sbjct: 92  HLSHNKLTSLPKDIEHLKELQELHLDYNQLTTLPKDIEHLKELQELHLDYNQ-LTTLPKE 150

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +     LQ++ L +  L+ +P EI
Sbjct: 151 IGYLKELQVLHLYDNQLTTLPKEI 174



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 96/157 (61%), Gaps = 5/157 (3%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L+L+ + +  LP  + +L +L+ L L  NKL +LP+ IG + NL  L L  N 
Sbjct: 222 KLQNLQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPNDIGKLQNLQELYLTNNQ 281

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP  +  L++L++L+L +N+L  LP  + +L +L++L L  N++ T+  DI  L NL
Sbjct: 282 LTTLPKDIGYLKELQILELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNL 341

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
             L + +N++  LP ++G LK L  L     HL+++P
Sbjct: 342 QELYLTNNQLTTLPKDIGYLKELQIL-----HLDDIP 373


>gi|260788690|ref|XP_002589382.1| hypothetical protein BRAFLDRAFT_77824 [Branchiostoma floridae]
 gi|229274559|gb|EEN45393.1| hypothetical protein BRAFLDRAFT_77824 [Branchiostoma floridae]
          Length = 699

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 142/481 (29%), Positives = 247/481 (51%), Gaps = 18/481 (3%)

Query: 85  IQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIG 144
           + A LN++ + +    + +L LDLS   +T +P  V  +T LE L +  N+L S+P  IG
Sbjct: 1   MAAGLNLQPQTV----DGLLTLDLSNQGLTSIPEEVFDITDLEFLGVSNNRLTSIPEAIG 56

Query: 145 YVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR 204
            +  L+ L    N LT LP ++ +LQ+L  L +  NKL  LP  + KL  L +L +  NR
Sbjct: 57  RLQKLSRLDAHGNMLTRLPQAIGSLQKLTHLYVYSNKLANLPPGIEKLQKLTLLSIGDNR 116

Query: 205 IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTML 264
           +  V P +  L NL +L + +NK+   PP + +L+ L  L +  N L EL K       L
Sbjct: 117 LTEVPPGVFLLPNLEVLDVSNNKLSTFPPGVEKLQKLRVLGIYDNQLTELQK-------L 169

Query: 265 VTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
             L +  N+L  +P  + +L NL  L +S N+L + P  + K   L E ++ G  L+ +P
Sbjct: 170 RELHINGNQLTEVPSGVCSLPNLEVLSVSNNKLSTFPPGVEKLQKLRELHINGNQLTEVP 229

Query: 325 DGLLSSLTSINNITLSRNKFTAYPSG----GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            G + SL ++  +++  NK + +P G       +   +Y +   +N++   P G+  + +
Sbjct: 230 SG-VCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRQLDIYGVKCHNNKLSTFPPGV-EKLQ 287

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
            L ++ +  N L  +P  + +   L  L++  +++S     ++ L  L  L ++ N L +
Sbjct: 288 KLRELRIYGNQLAEVPRGVCSLPNLEVLDVSNSKLSTFPPGVEKLQKLRQLHINGNQLTE 347

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           +PS + +L  L+ L +  NKL + P  +  L++L++L +  NQL  +P  +  L NL  L
Sbjct: 348 VPSGVCSLPNLEELSVYNNKLSTFPPGVEKLQKLRQLYIYGNQLTEVPPGVCSLPNLEVL 407

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
           SV  N L + P  +  L+ L  LY+ DN  L  +P  +    NL+++ ++N  LS  P  
Sbjct: 408 SVYNNKLSTFPPGVEKLQKLRELYIYDNQ-LTEVPSGVCSLPNLEVVYVNNNKLSTFPPG 466

Query: 561 I 561
           +
Sbjct: 467 V 467



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 145/539 (26%), Positives = 261/539 (48%), Gaps = 66/539 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLE----------------ELYLYGNKLASLPSQIGY 145
           N+  LD+S + ++  PP VEKL  L                 EL++ GN+L  +PS +  
Sbjct: 129 NLEVLDVSNNKLSTFPPGVEKLQKLRVLGIYDNQLTELQKLRELHINGNQLTEVPSGVCS 188

Query: 146 VTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRI 205
           + NL  L ++ N L++ P  +  LQ+LR L +  N+L E+P  V  L +L++L +  N++
Sbjct: 189 LPNLEVLSVSNNKLSTFPPGVEKLQKLRELHINGNQLTEVPSGVCSLPNLEVLSVYNNKL 248

Query: 206 KTVHPDIQYLSNLSMLSM-----RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
            T  P ++ L  L  L +      +NK+   PP + +L+ L  L +  N L E+P+ + +
Sbjct: 249 STFPPGVEKLQKLRQLDIYGVKCHNNKLSTFPPGVEKLQKLRELRIYGNQLAEVPRGVCS 308

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  LD+ +++L   P  +  L  L +L ++ N+L  VP  +    +L E +V    L
Sbjct: 309 LPNLEVLDVSNSKLSTFPPGVEKLQKLRQLHINGNQLTEVPSGVCSLPNLEELSVYNNKL 368

Query: 321 SSLPDGL----------------------LSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
           S+ P G+                      + SL ++  +++  NK + +P G   +   +
Sbjct: 369 STFPPGVEKLQKLRQLYIYGNQLTEVPPGVCSLPNLEVLSVYNNKLSTFPPGV-EKLQKL 427

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
             +    NQ+ ++P G+ S   NL  V + +N L++ P  +     L EL++  NQ++++
Sbjct: 428 RELYIYDNQLTEVPSGVCS-LPNLEVVYVNNNKLSTFPPGVERLQKLRELHVHGNQLTEI 486

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL---------------DLEE----- 458
              +  L NLEVL++S+N ++ LP  +  L +LK L                LE+     
Sbjct: 487 PPVVCYLTNLEVLIISDNPIRHLPDGVRRLTRLKTLYVSGCQFPGQVLQLKTLEKLHAGG 546

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
            K + LP+E+G L+ L  L L SN L +LP  + HL NL  + + +N   + PE +  L 
Sbjct: 547 CKFDMLPDEVGNLQHLWFLSLSSNLLRTLPSTMSHLHNLREVHLDKNKFDTFPEVLCDLP 606

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQG 577
            +  L++++N  +  +P  L     L+ + +   PL+  P ++   G + I+ +LK + 
Sbjct: 607 AMEKLFISNNN-ITRLPTALHRADKLKDLDVSGNPLTYPPQDVCEQGTAAIMAFLKQEA 664



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 242/478 (50%), Gaps = 28/478 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD   + +T LP ++  L  L  LY+Y NKLA+LP  I  +  LT L + +N LT +P  
Sbjct: 64  LDAHGNMLTRLPQAIGSLQKLTHLYVYSNKLANLPPGIEKLQKLTLLSIGDNRLTEVPPG 123

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL----------------YLRFNRIKTVH 209
           +  L  L VLD+ +NKL+  P  V KL  L++L                ++  N++  V 
Sbjct: 124 VFLLPNLEVLDVSNNKLSTFPPGVEKLQKLRVLGIYDNQLTELQKLRELHINGNQLTEVP 183

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
             +  L NL +LS+ +NK+   PP + +L+ L  L +  N L E+P  + +   L  L +
Sbjct: 184 SGVCSLPNLEVLSVSNNKLSTFPPGVEKLQKLRELHINGNQLTEVPSGVCSLPNLEVLSV 243

Query: 270 QHNELVNIPDMLGNLINLTRL-----RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
            +N+L   P  +  L  L +L     +   N+L + P  + K   L E  + G  L+ +P
Sbjct: 244 YNNKLSTFPPGVEKLQKLRQLDIYGVKCHNNKLSTFPPGVEKLQKLRELRIYGNQLAEVP 303

Query: 325 DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
            G+  SL ++  + +S +K + +P G   +   +  ++   NQ+ ++P G+ S   NL +
Sbjct: 304 RGV-CSLPNLEVLDVSNSKLSTFPPGV-EKLQKLRQLHINGNQLTEVPSGVCS-LPNLEE 360

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
           +++ +N L++ P  +     L +L +  NQ++++   + +L NLEVL + NN L   P  
Sbjct: 361 LSVYNNKLSTFPPGVEKLQKLRQLYIYGNQLTEVPPGVCSLPNLEVLSVYNNKLSTFPPG 420

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
           +  L+KL+ L + +N+L  +P+ +  L  L+ + + +N+L + P  +  L  L  L V  
Sbjct: 421 VEKLQKLRELYIYDNQLTEVPSGVCSLPNLEVVYVNNNKLSTFPPGVERLQKLRELHVHG 480

Query: 505 NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           N L  IP  +  L NL  L ++DN  + ++P  +   + L+ + +  C   Q P +++
Sbjct: 481 NQLTEIPPVVCYLTNLEVLIISDNP-IRHLPDGVRRLTRLKTLYVSGC---QFPGQVL 534



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 203/418 (48%), Gaps = 29/418 (6%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE 156
           + ++ +I  +    + ++  PP VEKL  L EL +YGN+LA +P  +  + NL  L ++ 
Sbjct: 260 KLRQLDIYGVKCHNNKLSTFPPGVEKLQKLRELRIYGNQLAEVPRGVCSLPNLEVLDVSN 319

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           + L++ P  +  LQ+LR L +  N+L E+P  V  L +L+ L +  N++ T  P ++ L 
Sbjct: 320 SKLSTFPPGVEKLQKLRQLHINGNQLTEVPSGVCSLPNLEELSVYNNKLSTFPPGVEKLQ 379

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
            L  L +  N++ E+PP +  L NL  L + +N L   P  +     L  L +  N+L  
Sbjct: 380 KLRQLYIYGNQLTEVPPGVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRELYIYDNQLTE 439

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  + +L NL  + ++ N+L + P  + +   L E +V G  L+ +P  ++  LT++  
Sbjct: 440 VPSGVCSLPNLEVVYVNNNKLSTFPPGVERLQKLRELHVHGNQLTEIPP-VVCYLTNLEV 498

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + +S N     P G                           R   L  + +         
Sbjct: 499 LIISDNPIRHLPDG-------------------------VRRLTRLKTLYVSGCQFPGQV 533

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
           L L T   L +L+ G  +   L +++ NL +L  L LS+NLL+ LPS++ +L  L+ + L
Sbjct: 534 LQLKT---LEKLHAGGCKFDMLPDEVGNLQHLWFLSLSSNLLRTLPSTMSHLHNLREVHL 590

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           ++NK ++ P  +  L  +++L + +N +  LP A+     L  L V  N L   P+++
Sbjct: 591 DKNKFDTFPEVLCDLPAMEKLFISNNNITRLPTALHRADKLKDLDVSGNPLTYPPQDV 648



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 20/182 (10%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGN--------------------KLA 137
           C   N+  L +S + I HLP  V +LT L+ LY+ G                     K  
Sbjct: 491 CYLTNLEVLIISDNPIRHLPDGVRRLTRLKTLYVSGCQFPGQVLQLKTLEKLHAGGCKFD 550

Query: 138 SLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
            LP ++G + +L  L L+ N L +LP ++++L  LR + L  NK +  P V+  L +++ 
Sbjct: 551 MLPDEVGNLQHLWFLSLSSNLLRTLPSTMSHLHNLREVHLDKNKFDTFPEVLCDLPAMEK 610

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L++  N I  +   +     L  L +  N +   P ++ E      +       E+  K 
Sbjct: 611 LFISNNNITRLPTALHRADKLKDLDVSGNPLTYPPQDVCEQGTAAIMAFLKQEAEKGTKR 670

Query: 258 IG 259
            G
Sbjct: 671 AG 672


>gi|359728044|ref|ZP_09266740.1| hypothetical protein Lwei2_14432 [Leptospira weilii str.
           2006001855]
          Length = 456

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/336 (38%), Positives = 190/336 (56%), Gaps = 5/336 (1%)

Query: 193 TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLE 252
           T ++ILYL  N++ T+  +I  L  L  L   +N+++ +P E+G+L+NL  LDL HN L+
Sbjct: 98  TDVQILYLNSNQLITLPKEIGKLKKLRELHSYNNQLKAIPKEIGKLQNLQKLDLNHNQLK 157

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
            +PKEIG    L  L L  N+L  IP   G L +L  L LS N+L+++P+       L  
Sbjct: 158 TIPKEIGKLQNLQELGLIGNQLKTIPKEFGKLKSLQVLYLSNNQLKTLPKEFGDLKSLQV 217

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKI 371
             +    L +LP  +   L  +  + L  N+    P   G  Q   V  +++  NQ+ K+
Sbjct: 218 LYLSNNQLKTLPKEI-RKLKKLQELALYNNQLKTLPKEIGKLQNLQVLGLSY--NQLKKL 274

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P   F + K+L K+ + +  LT+ P ++G    LTEL L  NQ++    +I  L NL  L
Sbjct: 275 PKE-FGKLKSLQKLYLSNYQLTTFPNEIGELQNLTELYLSNNQLTTFPNEIGELQNLTEL 333

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            LSNN L+ LP  I  L+ L+ L L  N+L ++PNEIG LK LQ L L +NQL ++P  I
Sbjct: 334 YLSNNQLQALPKKIEKLKNLQVLILNNNQLTTIPNEIGELKNLQVLTLNNNQLTTIPNEI 393

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
           G L NL  L++  N LQ++P+EIG L+NL  LYL+D
Sbjct: 394 GELKNLRELNLSRNQLQALPKEIGHLKNLQELYLDD 429



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/375 (33%), Positives = 206/375 (54%), Gaps = 27/375 (7%)

Query: 106 LDLSKSSITH-LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           L   +  I H L  +++  T ++ LYL  N+L +LP +IG +  L  L    N L ++P 
Sbjct: 79  LKAEEKRIYHNLTEALQNPTDVQILYLNSNQLITLPKEIGKLKKLRELHSYNNQLKAIPK 138

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            +  LQ L+ LDL HN+L  +P  + KL +L+ L L  N++KT+  +   L +L +L + 
Sbjct: 139 EIGKLQNLQKLDLNHNQLKTIPKEIGKLQNLQELGLIGNQLKTIPKEFGKLKSLQVLYLS 198

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           +N+++ LP E G+LK+L  L L++N L+ LPKEI     L  L L +N+L  +P  +G L
Sbjct: 199 NNQLKTLPKEFGDLKSLQVLYLSNNQLKTLPKEIRKLKKLQELALYNNQLKTLPKEIGKL 258

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
            NL  L LSYN+L+ +P+   K   L +  +    L++ P+  +  L ++  + LS N+ 
Sbjct: 259 QNLQVLGLSYNQLKKLPKEFGKLKSLQKLYLSNYQLTTFPNE-IGELQNLTELYLSNNQL 317

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
           T +P                 N+I ++        +NL+++ + +N L +LP  +     
Sbjct: 318 TTFP-----------------NEIGEL--------QNLTELYLSNNQLQALPKKIEKLKN 352

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L  L L  NQ++ +  +I  L NL+VL L+NN L  +P+ IG L+ L+ L+L  N+L++L
Sbjct: 353 LQVLILNNNQLTTIPNEIGELKNLQVLTLNNNQLTTIPNEIGELKNLRELNLSRNQLQAL 412

Query: 465 PNEIGFLKELQRLIL 479
           P EIG LK LQ L L
Sbjct: 413 PKEIGHLKNLQELYL 427



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/346 (34%), Positives = 174/346 (50%), Gaps = 27/346 (7%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
           +++ +L +  N++  LP E+G+LK L  L   +N L+ +PKEIG    L  LDL HN+L 
Sbjct: 98  TDVQILYLNSNQLITLPKEIGKLKKLRELHSYNNQLKAIPKEIGKLQNLQKLDLNHNQLK 157

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            IP  +G L NL  L L  N+L+++P+   K   L    +    L +LP      L S+ 
Sbjct: 158 TIPKEIGKLQNLQELGLIGNQLKTIPKEFGKLKSLQVLYLSNNQLKTLPKEF-GDLKSLQ 216

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + LS N+    P                             + K L ++ + +N L +L
Sbjct: 217 VLYLSNNQLKTLPKE-------------------------IRKLKKLQELALYNNQLKTL 251

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L  L L  NQ+ KL ++   L +L+ L LSN  L   P+ IG L+ L  L 
Sbjct: 252 PKEIGKLQNLQVLGLSYNQLKKLPKEFGKLKSLQKLYLSNYQLTTFPNEIGELQNLTELY 311

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L  N+L + PNEIG L+ L  L L +NQL +LP+ I  L NL  L +  N L +IP EIG
Sbjct: 312 LSNNQLTTFPNEIGELQNLTELYLSNNQLQALPKKIEKLKNLQVLILNNNQLTTIPNEIG 371

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L+NL  L LN+N  L  IP E+    NL+ ++L    L  +P EI
Sbjct: 372 ELKNLQVLTLNNNQ-LTTIPNEIGELKNLRELNLSRNQLQALPKEI 416



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 182/330 (55%), Gaps = 3/330 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L+ + +  LP  + KL  L EL+ Y N+L ++P +IG + NL  L L  N L ++P  
Sbjct: 103 LYLNSNQLITLPKEIGKLKKLRELHSYNNQLKAIPKEIGKLQNLQKLDLNHNQLKTIPKE 162

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ L L  N+L  +P    KL SL++LYL  N++KT+  +   L +L +L + +
Sbjct: 163 IGKLQNLQELGLIGNQLKTIPKEFGKLKSLQVLYLSNNQLKTLPKEFGDLKSLQVLYLSN 222

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+++ LP E+ +LK L  L L +N L+ LPKEIG    L  L L +N+L  +P   G L 
Sbjct: 223 NQLKTLPKEIRKLKKLQELALYNNQLKTLPKEIGKLQNLQVLGLSYNQLKKLPKEFGKLK 282

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L +L LS  +L + P  + +  +L E  +    L++ P+  +  L ++  + LS N+  
Sbjct: 283 SLQKLYLSNYQLTTFPNEIGELQNLTELYLSNNQLTTFPNE-IGELQNLTELYLSNNQLQ 341

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           A P     +  ++  +   +NQ+  IP  I    KNL  + + +N LT++P ++G    L
Sbjct: 342 ALPK-KIEKLKNLQVLILNNNQLTTIPNEI-GELKNLQVLTLNNNQLTTIPNEIGELKNL 399

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
            ELNL  NQ+  L ++I +L NL+ L L +
Sbjct: 400 RELNLSRNQLQALPKEIGHLKNLQELYLDD 429



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 167/291 (57%), Gaps = 3/291 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  LDL+ + +  +P  + KL +L+EL L GN+L ++P + G + +L  L L+ N 
Sbjct: 142 KLQNLQKLDLNHNQLKTIPKEIGKLQNLQELGLIGNQLKTIPKEFGKLKSLQVLYLSNNQ 201

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L +LP    +L+ L+VL L +N+L  LP  + KL  L+ L L  N++KT+  +I  L NL
Sbjct: 202 LKTLPKEFGDLKSLQVLYLSNNQLKTLPKEIRKLKKLQELALYNNQLKTLPKEIGKLQNL 261

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            +L +  N++++LP E G+LK+L  L L++  L   P EIG    L  L L +N+L   P
Sbjct: 262 QVLGLSYNQLKKLPKEFGKLKSLQKLYLSNYQLTTFPNEIGELQNLTELYLSNNQLTTFP 321

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           + +G L NLT L LS N+L+++P+ + K  +L    +    L+++P+  +  L ++  +T
Sbjct: 322 NEIGELQNLTELYLSNNQLQALPKKIEKLKNLQVLILNNNQLTTIPNE-IGELKNLQVLT 380

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
           L+ N+ T  P+    +  ++  +N   NQ+  +P  I    KNL ++ + D
Sbjct: 381 LNNNQLTTIPN-EIGELKNLRELNLSRNQLQALPKEI-GHLKNLQELYLDD 429


>gi|434387880|ref|YP_007098491.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
 gi|428018870|gb|AFY94964.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
          Length = 709

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 169/511 (33%), Positives = 269/511 (52%), Gaps = 37/511 (7%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYL-YGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           N+  LDL+ + I  LP S+  L++L  L L +  KLA LP  IG ++ LT L L+   +T
Sbjct: 86  NLKELDLTWNLIEILPTSIGDLSNLTHLNLSHATKLAELPDSIGNLSKLTYLNLSAGVIT 145

Query: 161 SLPDSLANLQQLRVLDLRH-NKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYL---S 216
           +LP+S+ NL +L+ L+L   ++L ++P  +  L +L  + L  +   ++   I+ L   S
Sbjct: 146 TLPESIGNLDRLKHLNLSWCSQLQQIPTAIGSLKNLTHIQLWGSGQSSIFKTIEQLGAQS 205

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           NL+ L +  + I  +P  +G L  L  LDL+HN L  LP+ IG    LV L+L+ N +  
Sbjct: 206 NLTHLYINSSSIVTIPESIGNLSKLTHLDLSHNRLNSLPESIGLLKNLVWLNLKCNNIAI 265

Query: 277 IPDMLGNLINLTRLRLSYNRL-ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           +P  + +L+NLT L L  N+L  +  E++ K ++LN  N+    +  L DG+  +L  +N
Sbjct: 266 LPISIEHLVNLTYLNLYSNKLLRNRSESIGKLINLNYLNLSNNKVDILFDGI-GNLKMLN 324

Query: 336 NITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
            + L  N  T+ P   G  T+ + +  IN   N+I  +    F    NL K+N+  N + 
Sbjct: 325 ELHLGNNCLTSLPENIGKLTKLSCLQLIN---NKIVDLTKN-FGNLVNLRKLNLNGNNIN 380

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            LP D+G    L EL L  N + KL + I NL +L +L L  N + +LP +IGNL  ++ 
Sbjct: 381 RLPDDIGNLKKLKELYLWKNNLEKLPDSIGNLTSLSILDLGRNQISELPDTIGNLHNIEK 440

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           LDL +N+L  LP  I  L+ +  L LQ N +  LP  +G+LTNL  L +  N L+ +PE 
Sbjct: 441 LDLYKNRLTCLPETISNLQSISHLYLQRNYIKLLPEGMGNLTNLKKLKIWNNRLRCLPES 500

Query: 514 IGTL-ENLHTLYLNDN------------------TCLNN----IPFELALCSNLQIMSLD 550
           IG L  NL +L + +N                   C NN    IP  +   +NL+ ++L 
Sbjct: 501 IGNLAANLQSLKIRNNRLRCLPESIGNLVNLNSLDCTNNLLTDIPKNIGNITNLKTLNLT 560

Query: 551 NCPLSQIPS-EIVVGGPSLIIRYLKMQGPYR 580
             PL+ +    ++   P+L + +L++  P R
Sbjct: 561 KNPLTDLTDLSVLQTIPNLTVHWLRVFLPRR 591



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 158/461 (34%), Positives = 249/461 (54%), Gaps = 8/461 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L ++  S+T LP S+  L+ L  LY+   K+A LP  IG ++NL  L L  N +  LP S
Sbjct: 44  LHITWFSLTSLPESIGNLSKLTRLYVRNTKIARLPESIGNLSNLKELDLTWNLIEILPTS 103

Query: 166 LANLQQLRVLDLRH-NKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
           + +L  L  L+L H  KL ELP  +  L+ L  L L    I T+   I  L  L  L++ 
Sbjct: 104 IGDLSNLTHLNLSHATKLAELPDSIGNLSKLTYLNLSAGVITTLPESIGNLDRLKHLNLS 163

Query: 225 D-NKIRELPPELGELKNLVTLDLAHNHLEELPKEI---GNCTMLVTLDLQHNELVNIPDM 280
             ++++++P  +G LKNL  + L  +    + K I   G  + L  L +  + +V IP+ 
Sbjct: 164 WCSQLQQIPTAIGSLKNLTHIQLWGSGQSSIFKTIEQLGAQSNLTHLYINSSSIVTIPES 223

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +GNL  LT L LS+NRL S+PE++    +L   N++   ++ LP  +   L ++  + L 
Sbjct: 224 IGNLSKLTHLDLSHNRLNSLPESIGLLKNLVWLNLKCNNIAILPISI-EHLVNLTYLNLY 282

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            NK     S    +  ++  +N  +N++D +  GI    K L+++++ +N LTSLP ++G
Sbjct: 283 SNKLLRNRSESIGKLINLNYLNLSNNKVDILFDGI-GNLKMLNELHLGNNCLTSLPENIG 341

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L+ L L  N+I  L+++  NLVNL  L L+ N + +LP  IGNL+KLK L L +N 
Sbjct: 342 KLTKLSCLQLINNKIVDLTKNFGNLVNLRKLNLNGNNINRLPDDIGNLKKLKELYLWKNN 401

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           LE LP+ IG L  L  L L  NQ+  LP  IG+L N+  L + +N L  +PE I  L+++
Sbjct: 402 LEKLPDSIGNLTSLSILDLGRNQISELPDTIGNLHNIEKLDLYKNRLTCLPETISNLQSI 461

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             LYL  N  +  +P  +   +NL+ + + N  L  +P  I
Sbjct: 462 SHLYLQRNY-IKLLPEGMGNLTNLKKLKIWNNRLRCLPESI 501



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 142/436 (32%), Positives = 233/436 (53%), Gaps = 15/436 (3%)

Query: 89  LNIEKEFLRCKEENILNLDLSK-------SSITHLPPSVEKLTHLEELYLYGNKLASL-- 139
           LN+    +    E+I NLD  K       S +  +P ++  L +L  + L+G+  +S+  
Sbjct: 137 LNLSAGVITTLPESIGNLDRLKHLNLSWCSQLQQIPTAIGSLKNLTHIQLWGSGQSSIFK 196

Query: 140 -PSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL 198
              Q+G  +NLT L +  +S+ ++P+S+ NL +L  LDL HN+LN LP  +  L +L  L
Sbjct: 197 TIEQLGAQSNLTHLYINSSSIVTIPESIGNLSKLTHLDLSHNRLNSLPESIGLLKNLVWL 256

Query: 199 YLRFNRIKTVHPDIQYLSNLSMLSMRDNKI-RELPPELGELKNLVTLDLAHNHLEELPKE 257
            L+ N I  +   I++L NL+ L++  NK+ R     +G+L NL  L+L++N ++ L   
Sbjct: 257 NLKCNNIAILPISIEHLVNLTYLNLYSNKLLRNRSESIGKLINLNYLNLSNNKVDILFDG 316

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           IGN  ML  L L +N L ++P+ +G L  L+ L+L  N++  + +     V+L + N+ G
Sbjct: 317 IGNLKMLNELHLGNNCLTSLPENIGKLTKLSCLQLINNKIVDLTKNFGNLVNLRKLNLNG 376

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             ++ LPD +  +L  +  + L +N     P       TS+  ++   NQI ++P  I  
Sbjct: 377 NNINRLPDDI-GNLKKLKELYLWKNNLEKLPDS-IGNLTSLSILDLGRNQISELPDTI-G 433

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
              N+ K+++  N LT LP  +     ++ L L  N I  L E + NL NL+ L + NN 
Sbjct: 434 NLHNIEKLDLYKNRLTCLPETISNLQSISHLYLQRNYIKLLPEGMGNLTNLKKLKIWNNR 493

Query: 438 LKKLPSSIGNLRK-LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
           L+ LP SIGNL   L+ L +  N+L  LP  IG L  L  L   +N L  +P+ IG++TN
Sbjct: 494 LRCLPESIGNLAANLQSLKIRNNRLRCLPESIGNLVNLNSLDCTNNLLTDIPKNIGNITN 553

Query: 497 LSYLSVGENNLQSIPE 512
           L  L++ +N L  + +
Sbjct: 554 LKTLNLTKNPLTDLTD 569



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 143/440 (32%), Positives = 219/440 (49%), Gaps = 47/440 (10%)

Query: 159 LTSLPDSLANLQQLR--VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           L+ L D +A  ++ R  +L L  N+L  LP  +  LT L  L++ +  + ++   I  LS
Sbjct: 3   LSELEDIIATAKRERWSILRLGVNQLTFLPDTIGDLTDLTELHITWFSLTSLPESIGNLS 62

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH-NELV 275
            L+ L +R+ KI  LP  +G L NL  LDL  N +E LP  IG+ + L  L+L H  +L 
Sbjct: 63  KLTRLYVRNTKIARLPESIGNLSNLKELDLTWNLIEILPTSIGDLSNLTHLNLSHATKLA 122

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA-LSSLPDGLLSSLTSI 334
            +PD +GNL  LT L LS   + ++PE++     L   N+  C+ L  +P    +++ S+
Sbjct: 123 ELPDSIGNLSKLTYLNLSAGVITTLPESIGNLDRLKHLNLSWCSQLQQIP----TAIGSL 178

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHN---------QIDKIPYGIFSRAKNLSKV 385
            N+T        + SG  + F ++  +  + N          I  IP  I + +K L+ +
Sbjct: 179 KNLT----HIQLWGSGQSSIFKTIEQLGAQSNLTHLYINSSSIVTIPESIGNLSK-LTHL 233

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL-SNNLLKK---- 440
           ++  N L SLP  +G    L  LNL  N I+ L   I++LVNL  L L SN LL+     
Sbjct: 234 DLSHNRLNSLPESIGLLKNLVWLNLKCNNIAILPISIEHLVNLTYLNLYSNKLLRNRSES 293

Query: 441 -------------------LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
                              L   IGNL+ L  L L  N L SLP  IG L +L  L L +
Sbjct: 294 IGKLINLNYLNLSNNKVDILFDGIGNLKMLNELHLGNNCLTSLPENIGKLTKLSCLQLIN 353

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           N++V L +  G+L NL  L++  NN+  +P++IG L+ L  LYL  N  L  +P  +   
Sbjct: 354 NKIVDLTKNFGNLVNLRKLNLNGNNINRLPDDIGNLKKLKELYLWKNN-LEKLPDSIGNL 412

Query: 542 SNLQIMSLDNCPLSQIPSEI 561
           ++L I+ L    +S++P  I
Sbjct: 413 TSLSILDLGRNQISELPDTI 432



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 198/402 (49%), Gaps = 33/402 (8%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS--- 161
           +LDLS + +  LP S+  L +L  L L  N +A LP  I ++ NLT L L  N L     
Sbjct: 232 HLDLSHNRLNSLPESIGLLKNLVWLNLKCNNIAILPISIEHLVNLTYLNLYSNKLLRNRS 291

Query: 162 ---------------------LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
                                L D + NL+ L  L L +N L  LP  + KLT L  L L
Sbjct: 292 ESIGKLINLNYLNLSNNKVDILFDGIGNLKMLNELHLGNNCLTSLPENIGKLTKLSCLQL 351

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
             N+I  +  +   L NL  L++  N I  LP ++G LK L  L L  N+LE+LP  IGN
Sbjct: 352 INNKIVDLTKNFGNLVNLRKLNLNGNNINRLPDDIGNLKKLKELYLWKNNLEKLPDSIGN 411

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
            T L  LDL  N++  +PD +GNL N+ +L L  NRL  +PET+S    ++   ++   +
Sbjct: 412 LTSLSILDLGRNQISELPDTIGNLHNIEKLDLYKNRLTCLPETISNLQSISHLYLQRNYI 471

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
             LP+G + +LT++  + +  N+    P        ++ S+   +N++  +P  I +   
Sbjct: 472 KLLPEG-MGNLTNLKKLKIWNNRLRCLPESIGNLAANLQSLKIRNNRLRCLPESIGNLV- 529

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE--DIQNLVNLEVLVLSNNLL 438
           NL+ ++  +NLLT +P ++G    L  LNL  N ++ L++   +Q + NL V  L   L 
Sbjct: 530 NLNSLDCTNNLLTDIPKNIGNITNLKTLNLTKNPLTDLTDLSVLQTIPNLTVHWLRVFLP 589

Query: 439 KKLPSSIGNLRKLKCLDLEENKLE---SLPNEIGFLKELQRL 477
           ++  + + + +      LEEN  E    L  ++G+ K  Q L
Sbjct: 590 RRYWTKVSDWKPEWL--LEENNAEIKRVLIQQVGYEKICQEL 629


>gi|322510775|gb|ADX06089.1| putative leucine-rich repeat ribonuclease inhibitor family protein
           [Organic Lake phycodnavirus 1]
          Length = 598

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 137/432 (31%), Positives = 228/432 (52%), Gaps = 32/432 (7%)

Query: 88  DLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVT 147
           DL   KE      +N+++ +L+ + ++ +P S+  L HL++L +  N+L  LP  IG + 
Sbjct: 14  DLEFNKEL-----QNVISFNLANNELSTIPDSIGNLIHLQQLDIRNNELGQLPDSIGNLI 68

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
           +L  L +  N L  LPDS+ NL  L+ LD+  N LN+LP  +  L  L+IL +  NR+  
Sbjct: 69  HLQQLDIRNNELGQLPDSIGNLIHLQQLDIEDNWLNQLPESIGNLIELEILNVNLNRLTL 128

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
           +  +I  +  +  L +  N++  LP  +G L+NL  L  + N L ++P+ I N T L  L
Sbjct: 129 LPENIGNIKKMRSLYIESNELTLLPVSIGGLQNLEQLFTSSNRLSQIPESICNLTNLQML 188

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
           D++ NEL  +P  +G L  L +L +  N L  +PE+++   HL   ++    LS LP+  
Sbjct: 189 DIKDNELTQLPKHIGKLRKLKKLDIGNNELSELPESITNLTHLQMLDIGYNELSELPE-- 246

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
                SI+N+                  T++  +  E+NQ+ ++P  I +   NL  + +
Sbjct: 247 -----SISNL------------------TNLQELYIENNQLTQLPESI-TNLTNLRMLYI 282

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
            +N L+ LPL +G    L  L +  N++S+L E I NL NL+ L + NN L +LP  IGN
Sbjct: 283 HNNQLSQLPLRIGNLTHLQILAIANNKLSELPERISNLTNLQKLYIQNNQLTRLPLRIGN 342

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           L  LK LD++ N+L  +P  I  L  L+ L+L +N  + +P  +  + N+ ++    NN+
Sbjct: 343 LTNLKVLDIKNNQLTQIPESISNLTNLETLVLTNNPNLFIPDWLRQM-NIRFIHYDVNNV 401

Query: 508 QSIPEEIGTLEN 519
              P E+  + N
Sbjct: 402 DVNPFEVHDVFN 413



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 134/383 (34%), Positives = 197/383 (51%), Gaps = 26/383 (6%)

Query: 146 VTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRI 205
           + N+    LA N L+++PDS+ NL  L+ LD+R+N+L +LP  +  L  L+ L +R N +
Sbjct: 21  LQNVISFNLANNELSTIPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIRNNEL 80

Query: 206 KTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
             +   I  L +L  L + DN + +LP  +G L  L  L++  N L  LP+ IGN   + 
Sbjct: 81  GQLPDSIGNLIHLQQLDIEDNWLNQLPESIGNLIELEILNVNLNRLTLLPENIGNIKKMR 140

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
           +L ++ NEL  +P  +G L NL +L  S NRL  +PE++    +L   +++   L+ LP 
Sbjct: 141 SLYIESNELTLLPVSIGGLQNLEQLFTSSNRLSQIPESICNLTNLQMLDIKDNELTQLPK 200

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
            +   L  +  + +  N+ +  P             N  H Q+  I Y            
Sbjct: 201 HI-GKLRKLKKLDIGNNELSELPES---------ITNLTHLQMLDIGY------------ 238

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
               N L+ LP  +     L EL +  NQ+++L E I NL NL +L + NN L +LP  I
Sbjct: 239 ----NELSELPESISNLTNLQELYIENNQLTQLPESITNLTNLRMLYIHNNQLSQLPLRI 294

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
           GNL  L+ L +  NKL  LP  I  L  LQ+L +Q+NQL  LP  IG+LTNL  L +  N
Sbjct: 295 GNLTHLQILAIANNKLSELPERISNLTNLQKLYIQNNQLTRLPLRIGNLTNLKVLDIKNN 354

Query: 506 NLQSIPEEIGTLENLHTLYLNDN 528
            L  IPE I  L NL TL L +N
Sbjct: 355 QLTQIPESISNLTNLETLVLTNN 377



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 122/349 (34%), Positives = 198/349 (56%), Gaps = 8/349 (2%)

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L N+   ++ +N++  +P  +G L +L  LD+ +N L +LP  IGN   L  LD+++NEL
Sbjct: 21  LQNVISFNLANNELSTIPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIRNNEL 80

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +PD +GNLI+L +L +  N L  +PE++   + L   NV    L+ LP+ +  ++  +
Sbjct: 81  GQLPDSIGNLIHLQQLDIEDNWLNQLPESIGNLIELEILNVNLNRLTLLPENI-GNIKKM 139

Query: 335 NNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            ++ +  N+ T  P   GG      +++     N++ +IP  I     NL  +++KDN L
Sbjct: 140 RSLYIESNELTLLPVSIGGLQNLEQLFT---SSNRLSQIPESI-CNLTNLQMLDIKDNEL 195

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
           T LP  +G    L +L++G N++S+L E I NL +L++L +  N L +LP SI NL  L+
Sbjct: 196 TQLPKHIGKLRKLKKLDIGNNELSELPESITNLTHLQMLDIGYNELSELPESISNLTNLQ 255

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
            L +E N+L  LP  I  L  L+ L + +NQL  LP  IG+LT+L  L++  N L  +PE
Sbjct: 256 ELYIENNQLTQLPESITNLTNLRMLYIHNNQLSQLPLRIGNLTHLQILAIANNKLSELPE 315

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            I  L NL  LY+ +N  L  +P  +   +NL+++ + N  L+QIP  I
Sbjct: 316 RISNLTNLQKLYIQNNQ-LTRLPLRIGNLTNLKVLDIKNNQLTQIPESI 363



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 89/149 (59%), Gaps = 6/149 (4%)

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
           + ++++QN+++     L+NN L  +P SIGNL  L+ LD+  N+L  LP+ IG L  LQ+
Sbjct: 16  EFNKELQNVISFN---LANNELSTIPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQ 72

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
           L +++N+L  LP +IG+L +L  L + +N L  +PE IG L  L  L +N N  L  +P 
Sbjct: 73  LDIRNNELGQLPDSIGNLIHLQQLDIEDNWLNQLPESIGNLIELEILNVNLNR-LTLLPE 131

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEIVVGG 565
            +     ++ + +++  L+ +P  + +GG
Sbjct: 132 NIGNIKKMRSLYIESNELTLLP--VSIGG 158


>gi|418726603|ref|ZP_13285214.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960513|gb|EKO24267.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 405

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 139/364 (38%), Positives = 198/364 (54%), Gaps = 26/364 (7%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N   +RVLDL       LP  + KL +L+ LYL  NR+KT+  +I  L NL  L
Sbjct: 40  LTKALQNPMDVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++  N++  LP E+G+L+NL  LDL  N L  LP EIG    L TL L  N+L  +P   
Sbjct: 100 NLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRES 159

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L LS N+L ++P+ + +  +L   N++   L++L   +              
Sbjct: 160 GKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI-------------- 205

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                       Q  ++ ++N   NQ+  +P  I  + +NL  +N+ DN LT+LP+++G 
Sbjct: 206 -----------EQLKNLQTLNLSDNQLTTLPIEI-GKLQNLHTLNLSDNQLTTLPIEIGK 253

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  LNL  NQ++ LS +I  L NL+ L L +N L  L   I  L+ L+ L L  N+L
Sbjct: 254 LQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRL 313

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
             LP EIG L+ LQ L L +NQL +LP  IG L NL  LS+ +N L + P+EIG L+NL 
Sbjct: 314 VILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQ 373

Query: 522 TLYL 525
           TLYL
Sbjct: 374 TLYL 377



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/355 (36%), Positives = 188/355 (52%), Gaps = 27/355 (7%)

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           +++L L      T+  +I+ L NL  L + DN+++ LP E+G+LKNL  L+L+ N L  L
Sbjct: 50  VRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTIL 109

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           PKEIG    L  LDL  N L  +P  +G L NL  L LS N+L ++P    K  +L E N
Sbjct: 110 PKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELN 169

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +    L++LP  +                          Q  ++ ++N + NQ+  + + 
Sbjct: 170 LSDNQLTTLPQEI-------------------------GQLQNLQTLNLKSNQLTTL-FK 203

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
              + KNL  +N+ DN LT+LP+++G    L  LNL  NQ++ L  +I  L NL  L LS
Sbjct: 204 EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLS 263

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
            N L  L   IG L+ L+ L+L  N+L +L  EI  LK LQ L L  N+LV LP+ IG L
Sbjct: 264 GNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQL 323

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
            NL  L++  N L ++P EIG L+NL TL L  N  +   P E+    NLQ + L
Sbjct: 324 QNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLM-TFPKEIGQLKNLQTLYL 377



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 127/351 (36%), Positives = 191/351 (54%), Gaps = 26/351 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS  + T LP  +EKL +L++LYL+ N+L +LP +IG + NL  L L+ N LT LP  
Sbjct: 53  LDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ LDL  N+L  LP+ + KL +L+ LYL  N++ T+  +   L NL  L++ D
Sbjct: 113 IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSD 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L+NL TL+L  N L  L KEI     L TL+L  N+L  +P  +G L 
Sbjct: 173 NQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L LS N+L ++P  + K  +L+  N+ G  L++L            +I + +    
Sbjct: 233 NLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTL------------SIEIGK---- 276

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                      ++  +N   NQ+  +   I  + KNL  +++  N L  LP ++G    L
Sbjct: 277 ---------LQNLQDLNLHSNQLTTLSKEI-EQLKNLQTLSLSYNRLVILPKEIGQLQNL 326

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ELNL  NQ++ L  +I  L NL+ L L  N L   P  IG L+ L+ L L
Sbjct: 327 QELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYL 377



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 126/347 (36%), Positives = 177/347 (51%), Gaps = 31/347 (8%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L +       LP E+ +LKNL  L L  N L+ LPKEIG    L  L+L  N+L  
Sbjct: 49  DVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTI 108

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP--DGLLSSLTSI 334
           +P  +G L NL RL L  NRL  +P  + K  +L    +    L++LP   G L +L  +
Sbjct: 109 LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQEL 168

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
           N   LS N+ T  P     Q  ++ ++N + NQ+  + +    + KNL  +N+ DN LT+
Sbjct: 169 N---LSDNQLTTLPQE-IGQLQNLQTLNLKSNQLTTL-FKEIEQLKNLQTLNLSDNQLTT 223

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP+++G                        L NL  L LS+N L  LP  IG L+ L  L
Sbjct: 224 LPIEIG-----------------------KLQNLHTLNLSDNQLTTLPIEIGKLQNLHTL 260

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           +L  N+L +L  EIG L+ LQ L L SNQL +L + I  L NL  LS+  N L  +P+EI
Sbjct: 261 NLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEI 320

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           G L+NL  L L +N  L  +P E+    NLQ +SL    L   P EI
Sbjct: 321 GQLQNLQELNLWNNQ-LTALPIEIGQLQNLQTLSLYKNRLMTFPKEI 366



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/272 (35%), Positives = 153/272 (56%), Gaps = 14/272 (5%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  LDL  + +T LP  + KL +L+ LYL  N+L +LP + G + NL  L L++N 
Sbjct: 115 KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQ 174

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP  +  LQ L+ L+L+ N+L  L   + +L +L+ L L  N++ T+  +I  L NL
Sbjct: 175 LTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNL 234

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++ DN++  LP E+G+L+NL TL+L+ N L  L  EIG    L  L+L  N+L  + 
Sbjct: 235 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLS 294

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +  L NL  L LSYNRL  +P+ + +  +L E N+    L++LP   +  L ++  ++
Sbjct: 295 KEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE-IGQLQNLQTLS 353

Query: 339 LSRNKFTAYPS-------------GGPTQFTS 357
           L +N+   +P              GG  QF+S
Sbjct: 354 LYKNRLMTFPKEIGQLKNLQTLYLGGHNQFSS 385



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 109/311 (35%), Positives = 170/311 (54%), Gaps = 8/311 (2%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  LDL       +P  +  L NL +L L  NRL+++P+ + +  +L E
Sbjct: 39  DLTKALQNPMDVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQE 98

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP--SGGPTQFTSVYSINFEHNQIDK 370
            N+    L+ LP   +  L ++  + L  N+ T  P   G      ++Y      NQ+  
Sbjct: 99  LNLSSNQLTILPKE-IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLY---LSSNQLTT 154

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           +P     + +NL ++N+ DN LT+LP ++G    L  LNL +NQ++ L ++I+ L NL+ 
Sbjct: 155 LPRE-SGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQT 213

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA 490
           L LS+N L  LP  IG L+ L  L+L +N+L +LP EIG L+ L  L L  NQL +L   
Sbjct: 214 LNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIE 273

Query: 491 IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLD 550
           IG L NL  L++  N L ++ +EI  L+NL TL L+ N  +  +P E+    NLQ ++L 
Sbjct: 274 IGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLV-ILPKEIGQLQNLQELNLW 332

Query: 551 NCPLSQIPSEI 561
           N  L+ +P EI
Sbjct: 333 NNQLTALPIEI 343



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
           + L +A+ +  ++  L +   N  ++P+EI  L+NL  LYL DN  L  +P E+    NL
Sbjct: 38  MDLTKALQNPMDVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNR-LKTLPKEIGQLKNL 96

Query: 545 QIMSLDNCPLSQIPSEI 561
           Q ++L +  L+ +P EI
Sbjct: 97  QELNLSSNQLTILPKEI 113


>gi|359726570|ref|ZP_09265266.1| hypothetical protein Lwei2_06132 [Leptospira weilii str.
           2006001855]
          Length = 540

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 170/475 (35%), Positives = 247/475 (52%), Gaps = 36/475 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +  LP  + +L +L+ELYL  N+L ++P +IG + NL  L L +N L + P  
Sbjct: 45  LNLSGQELATLPKEIGQLQNLQELYLQWNQLIAIPKEIGQLQNLQTLDLRDNQLVTFPKE 104

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L +LDL  N+L  LP  +  L SL+ L L  N++ T+  +I  L NL  L    
Sbjct: 105 MVELQKLEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTLPKEIGQLQNLQELWSPG 164

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL TL+LA+N L  LPKEIG    L TLDL+ N+L+ +P  +G L 
Sbjct: 165 NRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLDLRDNQLIILPKEIGQLQ 224

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTS----INNITL 339
           NL  L L  NRL + P+ + +  +L   N+    L++ P   G L +L      IN ++L
Sbjct: 225 NLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLRDLELLINPLSL 284

Query: 340 SRNKFTA--YPSGGPTQFTSVYSINFEHN---------QIDK--IPYGIFSRAKNLSKVN 386
              K     +P+        V      HN         Q+ +  I Y  FS+        
Sbjct: 285 KERKRIQKLFPNSN-LDLREVAKDGVYHNLNLAQEEPLQVLELSIAYKSFSQL------- 336

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
                    P ++  +  L  L L       + ++I  L NL+ L+L  N L  LPS+IG
Sbjct: 337 --------FPKEILKFRNLQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTIG 388

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            LR L+ L+LE N LESLP EI  L+ L  L L  N+L + P+ I  L  L  L +  N 
Sbjct: 389 QLRNLRGLNLEANLLESLPKEIARLRNLHTLRLHQNKLKTFPKEILQLGKLQKLDLSANE 448

Query: 507 LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+ +PEE+  L+NL  L L+ N  L  +P E+A   NLQ + L+   L+ +PSEI
Sbjct: 449 LKILPEELERLQNLQELDLSHNQ-LTILPKEIAKLQNLQELHLNGNQLTTLPSEI 502



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 141/448 (31%), Positives = 223/448 (49%), Gaps = 33/448 (7%)

Query: 143 IGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           I ++  L    + + + T L  +L N  ++RVL+L   +L  LP  + +L +L+ LYL++
Sbjct: 13  ICFICELQAEEVEQGTYTDLTKALQNPSKVRVLNLSGQELATLPKEIGQLQNLQELYLQW 72

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N++  +  +I  L NL  L +RDN++   P E+ EL+ L  LDL+ N L  LP EIG   
Sbjct: 73  NQLIAIPKEIGQLQNLQTLDLRDNQLVTFPKEMVELQKLEMLDLSENRLIILPAEIGLLQ 132

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L +L L  N+L  +P  +G L NL  L    NRL ++P+ + +  +L   N+    L++
Sbjct: 133 SLQSLSLYKNKLTTLPKEIGQLQNLQELWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTA 192

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LP   +  L ++  + L  N+    P     Q  ++ ++N  +N++   P  I  + +NL
Sbjct: 193 LPKE-IGQLQNLQTLDLRDNQLIILPK-EIGQLQNLQTLNLVNNRLTTFPKEI-GQLQNL 249

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLV--------------- 426
             +N+ +N LT+ P ++G    L +L L  N +S K  + IQ L                
Sbjct: 250 QTLNLVNNRLTTFPKEIGQLQNLRDLELLINPLSLKERKRIQKLFPNSNLDLREVAKDGV 309

Query: 427 ----------NLEVLVLS---NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
                      L+VL LS    +  +  P  I   R L+ L L +    ++P EIG LK 
Sbjct: 310 YHNLNLAQEEPLQVLELSIAYKSFSQLFPKEILKFRNLQSLYLYDCGFPTVPKEIGRLKN 369

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L+ L+L  N L +LP  IG L NL  L++  N L+S+P+EI  L NLHTL L+ N  L  
Sbjct: 370 LKYLLLGLNGLHNLPSTIGQLRNLRGLNLEANLLESLPKEIARLRNLHTLRLHQNK-LKT 428

Query: 534 IPFELALCSNLQIMSLDNCPLSQIPSEI 561
            P E+     LQ + L    L  +P E+
Sbjct: 429 FPKEILQLGKLQKLDLSANELKILPEEL 456



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 6/211 (2%)

Query: 103 ILNLDLSKSSITHL-PPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           +L L ++  S + L P  + K  +L+ LYLY     ++P +IG + NL  L L  N L +
Sbjct: 323 VLELSIAYKSFSQLFPKEILKFRNLQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHN 382

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP ++  L+ LR L+L  N L  LP  + +L +L  L L  N++KT   +I  L  L  L
Sbjct: 383 LPSTIGQLRNLRGLNLEANLLESLPKEIARLRNLHTLRLHQNKLKTFPKEILQLGKLQKL 442

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N+++ LP EL  L+NL  LDL+HN L  LPKEI     L  L L  N+L  +P  +
Sbjct: 443 DLSANELKILPEELERLQNLQELDLSHNQLTILPKEIAKLQNLQELHLNGNQLTTLPSEI 502

Query: 282 GNLINLTRLRLSYNRL-----ESVPETLSKC 307
           G L  L  LRL  N       E + + L KC
Sbjct: 503 GFLKKLKILRLYQNEFSSEEKERIQKLLPKC 533


>gi|417765306|ref|ZP_12413270.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352488|gb|EJP04673.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 405

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 139/364 (38%), Positives = 198/364 (54%), Gaps = 26/364 (7%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N   +RVLDL       LP  + KL +L+ LYL  NR+KT+  +I  L NL  L
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++  N++  LP E+G+L+NL  LDL  N L  LP EIG    L TL L  N+L  +P   
Sbjct: 100 NLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRES 159

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L LS N+L ++P+ + +  +L   N++   L++L   +              
Sbjct: 160 GKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI-------------- 205

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                       Q  ++ ++N   NQ+  +P  I  + +NL  +N+ DN LT+LP+++G 
Sbjct: 206 -----------EQLKNLQTLNLSDNQLTTLPIEI-GKLQNLHTLNLSDNQLTTLPIEIGK 253

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  LNL  NQ++ LS +I  L NL+ L L +N L  L   I  L+ L+ L L  N+L
Sbjct: 254 LQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRL 313

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
             LP EIG L+ LQ L L +NQL +LP  IG L NL  LS+ +N L + P+EIG L+NL 
Sbjct: 314 VILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQ 373

Query: 522 TLYL 525
           TLYL
Sbjct: 374 TLYL 377



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 128/355 (36%), Positives = 193/355 (54%), Gaps = 26/355 (7%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS  + T LP  +EKL +L++LYL+ N+L +LP +IG + NL  L L+ N LT 
Sbjct: 49  NVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTI 108

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L+ L+ LDL  N+L  LP+ + KL +L+ LYL  N++ T+  +   L NL  L
Sbjct: 109 LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQEL 168

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++ DN++  LP E+G+L+NL TL+L  N L  L KEI     L TL+L  N+L  +P  +
Sbjct: 169 NLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEI 228

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L LS N+L ++P  + K  +L+  N+ G  L++L            +I + +
Sbjct: 229 GKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTL------------SIEIGK 276

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                          ++  +N   NQ+  +   I  + KNL  +++  N L  LP ++G 
Sbjct: 277 -------------LQNLQDLNLHSNQLTTLSKEI-EQLKNLQTLSLSYNRLVILPKEIGQ 322

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
              L ELNL  NQ++ L  +I  L NL+ L L  N L   P  IG L+ L+ L L
Sbjct: 323 LQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYL 377



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 131/356 (36%), Positives = 188/356 (52%), Gaps = 27/356 (7%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           ++++L L      T+   I+ L NL  L + DN+++ LP E+G+LKNL  L+L+ N L  
Sbjct: 49  NVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTI 108

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LPKEIG    L  LDL  N L  +P  +G L NL  L LS N+L ++P    K  +L E 
Sbjct: 109 LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQEL 168

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           N+    L++LP  +                          Q  ++ ++N + NQ+  + +
Sbjct: 169 NLSDNQLTTLPQEI-------------------------GQLQNLQTLNLKSNQLTTL-F 202

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
               + KNL  +N+ DN LT+LP+++G    L  LNL  NQ++ L  +I  L NL  L L
Sbjct: 203 KEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNL 262

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           S N L  L   IG L+ L+ L+L  N+L +L  EI  LK LQ L L  N+LV LP+ IG 
Sbjct: 263 SGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQ 322

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
           L NL  L++  N L ++P EIG L+NL TL L  N  +   P E+    NLQ + L
Sbjct: 323 LQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLM-TFPKEIGQLKNLQTLYL 377



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 126/347 (36%), Positives = 177/347 (51%), Gaps = 31/347 (8%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           N+ +L +       LP ++ +LKNL  L L  N L+ LPKEIG    L  L+L  N+L  
Sbjct: 49  NVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTI 108

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP--DGLLSSLTSI 334
           +P  +G L NL RL L  NRL  +P  + K  +L    +    L++LP   G L +L  +
Sbjct: 109 LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQEL 168

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
           N   LS N+ T  P     Q  ++ ++N + NQ+  + +    + KNL  +N+ DN LT+
Sbjct: 169 N---LSDNQLTTLPQE-IGQLQNLQTLNLKSNQLTTL-FKEIEQLKNLQTLNLSDNQLTT 223

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP+++G                        L NL  L LS+N L  LP  IG L+ L  L
Sbjct: 224 LPIEIG-----------------------KLQNLHTLNLSDNQLTTLPIEIGKLQNLHTL 260

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           +L  N+L +L  EIG L+ LQ L L SNQL +L + I  L NL  LS+  N L  +P+EI
Sbjct: 261 NLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEI 320

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           G L+NL  L L +N  L  +P E+    NLQ +SL    L   P EI
Sbjct: 321 GQLQNLQELNLWNNQ-LTALPIEIGQLQNLQTLSLYKNRLMTFPKEI 366



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/272 (35%), Positives = 153/272 (56%), Gaps = 14/272 (5%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  LDL  + +T LP  + KL +L+ LYL  N+L +LP + G + NL  L L++N 
Sbjct: 115 KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQ 174

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP  +  LQ L+ L+L+ N+L  L   + +L +L+ L L  N++ T+  +I  L NL
Sbjct: 175 LTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNL 234

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++ DN++  LP E+G+L+NL TL+L+ N L  L  EIG    L  L+L  N+L  + 
Sbjct: 235 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLS 294

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +  L NL  L LSYNRL  +P+ + +  +L E N+    L++LP   +  L ++  ++
Sbjct: 295 KEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE-IGQLQNLQTLS 353

Query: 339 LSRNKFTAYPS-------------GGPTQFTS 357
           L +N+   +P              GG  QF+S
Sbjct: 354 LYKNRLMTFPKEIGQLKNLQTLYLGGHNQFSS 385



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 109/311 (35%), Positives = 170/311 (54%), Gaps = 8/311 (2%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  LDL       +P  +  L NL +L L  NRL+++P+ + +  +L E
Sbjct: 39  DLTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQE 98

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP--SGGPTQFTSVYSINFEHNQIDK 370
            N+    L+ LP   +  L ++  + L  N+ T  P   G      ++Y      NQ+  
Sbjct: 99  LNLSSNQLTILPKE-IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLY---LSSNQLTT 154

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           +P     + +NL ++N+ DN LT+LP ++G    L  LNL +NQ++ L ++I+ L NL+ 
Sbjct: 155 LPRE-SGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQT 213

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA 490
           L LS+N L  LP  IG L+ L  L+L +N+L +LP EIG L+ L  L L  NQL +L   
Sbjct: 214 LNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIE 273

Query: 491 IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLD 550
           IG L NL  L++  N L ++ +EI  L+NL TL L+ N  +  +P E+    NLQ ++L 
Sbjct: 274 IGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLV-ILPKEIGQLQNLQELNLW 332

Query: 551 NCPLSQIPSEI 561
           N  L+ +P EI
Sbjct: 333 NNQLTALPIEI 343



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
           + L +A+ +  N+  L +   N  ++P++I  L+NL  LYL DN  L  +P E+    NL
Sbjct: 38  MDLTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNR-LKTLPKEIGQLKNL 96

Query: 545 QIMSLDNCPLSQIPSEI 561
           Q ++L +  L+ +P EI
Sbjct: 97  QELNLSSNQLTILPKEI 113


>gi|418667007|ref|ZP_13228423.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
 gi|410757251|gb|EKR18865.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
          Length = 564

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 163/460 (35%), Positives = 246/460 (53%), Gaps = 18/460 (3%)

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
           + +T LP  + +L +L+ L L  N+LA+LP +IG + NL  L L  N LT+LP  +  L+
Sbjct: 100 NQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLK 159

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
            L+ L L  NKL  +P  +++L +L IL L+ NRI T+  +I+   NL  L++R N++  
Sbjct: 160 NLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVT 219

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+GELK L  L+L +N ++ LP EIG    L   +L  N+L +IP  +GNL NL  L
Sbjct: 220 LPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRML 279

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS--------RN 342
            L  N+L+++P  + K   L   N+    L S     + +L    NI L         RN
Sbjct: 280 YLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGETYRN 339

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
              A       Q   + S++ E+ +    P  I  + KNL  +++ D  L +LP ++   
Sbjct: 340 LNLAL-----EQPLKILSLSLEYQEFSLFPKEIL-KLKNLRSLSLYDTSLVALPKEIVRL 393

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVL-VLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
             L  L+LG NQ+  L ++I  L NL  L + +NN  + LP  I  L+ L+ L L +N+ 
Sbjct: 394 KHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRF 453

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
           +  P EI  LK+L  L + +NQL +LP  IG L  L  L +  N L ++P EIG L NL 
Sbjct: 454 KIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLT 513

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            LYL  N  +  +P E+A   NL+ ++L   P+   P E+
Sbjct: 514 ELYLQYNR-IKTLPEEIARLQNLRKLTLYENPIP--PQEL 550



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 167/511 (32%), Positives = 255/511 (49%), Gaps = 67/511 (13%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           +T LP  + +L +L+ L L  N+LA+LP +IG + NL  LGL+EN LT+ P  +  L+ L
Sbjct: 1   LTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENL 60

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYL---------RFNRIKTVHPDIQYLSNLSMLSM 223
           + LDL  N+L  LP  + +L  L+ L L         + N++ T+  +I  L NL +LS+
Sbjct: 61  QELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSL 120

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
             N++  LP E+G+L+NL +LDL  N L  LP+EI     L  L L  N+L  +P  +  
Sbjct: 121 SYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWE 180

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L NLT LRL  NR+ ++P+ + K  +L E N+ G  L +LP G +  L  +  + L  N+
Sbjct: 181 LENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLP-GEIGELKLLEELNLENNR 239

Query: 344 FTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
               P+  G      +++  N   N++  IP  I    +NL  + +++N L +LP  +  
Sbjct: 240 IKILPNEIGA---LENLWIFNLSGNKLASIPKEI-GNLQNLRMLYLENNQLKTLPRQMEK 295

Query: 402 WVGLTELNLGTNQ-ISKLSEDIQNLV---NLEV------------------------LVL 433
              L  LNL  N  +S+  + IQ L+   N+++                        L L
Sbjct: 296 LQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSLSL 355

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
                   P  I  L+ L+ L L +  L +LP EI  LK L+RL L  NQL SLP+ IG 
Sbjct: 356 EYQEFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGL 415

Query: 494 LTNLSYLSVGENN-LQSIPEEIGTLENLHTLYLNDNTC---------------------- 530
           L NL  L +G NN  + +P+EI  L+NL +L LN N                        
Sbjct: 416 LRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQ 475

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+ +P ++     LQ++ L +  L+ +PSEI
Sbjct: 476 LDALPEKIGRLKGLQMLDLSHNRLTTLPSEI 506



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 191/390 (48%), Gaps = 60/390 (15%)

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+G+L+NL TL+L  N L  LP EIG    L TL L  N+L   P  +G L NL  L
Sbjct: 4   LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQEL 63

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG--------LLSSLTSINNITLSRN 342
            L+ N+L+++P+ + +   L + N++G  +++LP G         +  L ++  ++LS N
Sbjct: 64  DLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYN 123

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
           +    P     Q  ++ S++   NQ+  +P  I ++ KNL ++ +  N LT +P ++   
Sbjct: 124 RLATLPRE-IGQLQNLKSLDLGGNQLTTLPREI-NKLKNLKELYLNGNKLTIVPKEIWEL 181

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
             LT L L  N+IS L ++I+   NL+ L L  N L  LP  IG L+ L+ L+LE N+++
Sbjct: 182 ENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIK 241

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LPNEIG L+ L    L  N+L S+P+ IG+L NL  L +  N L+++P ++  L++L  
Sbjct: 242 ILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 301

Query: 523 L----------------------------------YLNDNTCLNN--------------- 533
           L                                  Y N N  L                 
Sbjct: 302 LNLLINPLLSEERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQEFS 361

Query: 534 -IPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             P E+    NL+ +SL +  L  +P EIV
Sbjct: 362 LFPKEILKLKNLRSLSLYDTSLVALPKEIV 391


>gi|418726611|ref|ZP_13285222.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960521|gb|EKO24275.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 447

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 145/414 (35%), Positives = 213/414 (51%), Gaps = 49/414 (11%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L+LS  + T LP  +E+L +L+EL L  N+LA+ P+ I  +  L  L L+EN L  
Sbjct: 49  NVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVM 108

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP+ +  LQ L+ L L  NKL   P  + +L +L+ L L+ N++ T+  +I  L NL  L
Sbjct: 109 LPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKL 168

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++R N++  LP E+G+L+NL TL+L  N L  LP EIG    L TL L  N+L   P  +
Sbjct: 169 NLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEI 228

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L L  NRL ++P+ + +                        L ++ N+ LS 
Sbjct: 229 GQLENLQELDLWNNRLTALPKEIGQ------------------------LKNLENLELSE 264

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T +P                             + K L  + +  N L  LP ++G 
Sbjct: 265 NQLTTFPKE-------------------------IGQLKKLQDLGLSYNRLVILPKEIGQ 299

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L +L L  N++  L ++I  L NL++L L  N  K +   IG L+ L  L+L  N+L
Sbjct: 300 LEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKKIGQLKNLLQLNLSYNQL 359

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
            +LP EIG LK L  L L +NQL +LP+ IG L NL  L +G N L ++P+EIG
Sbjct: 360 ATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 413



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 134/379 (35%), Positives = 207/379 (54%), Gaps = 4/379 (1%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L  +L N   +RVL+L       LP  + +L +L+ L L  N++ T    I  L  L  
Sbjct: 39  DLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLES 98

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++  LP E+G L+NL  L L  N L   PKEIG    L TL+LQ N+L  +P  
Sbjct: 99  LDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVE 158

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL +L L  NRL  +P+ + +  +L   N++   L++LP  +   L ++  + LS
Sbjct: 159 IGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEI-GQLQNLQTLGLS 217

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T +P     Q  ++  ++  +N++  +P  I  + KNL  + + +N LT+ P ++G
Sbjct: 218 ENQLTTFPKE-IGQLENLQELDLWNNRLTALPKEI-GQLKNLENLELSENQLTTFPKEIG 275

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L +L L  N++  L ++I  L  L+ L LS N L  LP  IG L+ L+ LDL  N+
Sbjct: 276 QLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQ 335

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
            +++  +IG LK L +L L  NQL +LP  IG L NL  L +G N L ++P+EIG L+NL
Sbjct: 336 FKTVSKKIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNL 395

Query: 521 HTLYLNDNTCLNNIPFELA 539
           + L L  N  L  +P E+ 
Sbjct: 396 YNLGLGTNQ-LTTLPKEIG 413



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 190/346 (54%), Gaps = 3/346 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +   P  + +L  LE L L  N+L  LP++IG + NL  LGL +N L 
Sbjct: 71  KNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLI 130

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           + P  +  L+ L+ L+L+ N+L  LP+ + +L +L+ L LR NR+  +  +I  L NL  
Sbjct: 131 TFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQT 190

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L+++DN++  LP E+G+L+NL TL L+ N L   PKEIG    L  LDL +N L  +P  
Sbjct: 191 LNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLWNNRLTALPKE 250

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LS N+L + P+ + +   L +  +    L  LP   +  L  + ++ LS
Sbjct: 251 IGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKE-IGQLEKLQDLGLS 309

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P     Q  ++  ++  +NQ   +   I  + KNL ++N+  N L +LP ++G
Sbjct: 310 YNRLVILPK-EIGQLKNLQMLDLCYNQFKTVSKKI-GQLKNLLQLNLSYNQLATLPAEIG 367

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
               L  L+LGTNQ++ L ++I  L NL  L L  N L  LP  IG
Sbjct: 368 QLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 413



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 176/367 (47%), Gaps = 48/367 (13%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           N+ +L++       LP E+ +LKNL  LDL  N L   P  I     L +LDL  N LV 
Sbjct: 49  NVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVM 108

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P+ +G L NL  L L  N+L + P+ + +  +L   N++   L++LP  +   L ++  
Sbjct: 109 LPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEI-GQLQNLEK 167

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L +N+ T  P                             + +NL  +N++DN L +LP
Sbjct: 168 LNLRKNRLTVLPKE-------------------------IGQLQNLQTLNLQDNQLATLP 202

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
           +++G    L  L L  NQ++   ++I  L NL+ L L NN L  LP  IG L+ L+ L+L
Sbjct: 203 VEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLEL 262

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
            EN+L + P EIG LK+LQ L L  N+LV LP+ IG L  L  L +  N L  +P+EIG 
Sbjct: 263 SENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQ 322

Query: 517 LENLHTLYLNDNTC----------------------LNNIPFELALCSNLQIMSLDNCPL 554
           L+NL  L L  N                        L  +P E+    NL  + L    L
Sbjct: 323 LKNLQMLDLCYNQFKTVSKKIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQL 382

Query: 555 SQIPSEI 561
           + +P EI
Sbjct: 383 TTLPKEI 389



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 154/297 (51%), Gaps = 4/297 (1%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  L+L       +P  +  L NL  L L  N+L + P  + +   L  
Sbjct: 39  DLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLES 98

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            ++    L  LP+  +  L ++  + L +NK   +P     Q  ++ ++N + NQ+  +P
Sbjct: 99  LDLSENRLVMLPNE-IGRLQNLQELGLYKNKLITFPK-EIGQLRNLQTLNLQDNQLATLP 156

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + +NL K+N++ N LT LP ++G    L  LNL  NQ++ L  +I  L NL+ L 
Sbjct: 157 VEI-GQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLG 215

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           LS N L   P  IG L  L+ LDL  N+L +LP EIG LK L+ L L  NQL + P+ IG
Sbjct: 216 LSENQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIG 275

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
            L  L  L +  N L  +P+EIG LE L  L L+ N  +  +P E+    NLQ++ L
Sbjct: 276 QLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLV-ILPKEIGQLKNLQMLDL 331



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 90/167 (53%), Gaps = 24/167 (14%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN-------------KLES- 463
           L++ +QN +N+ VL LS      LP  I  L+ L+ LDL +N             KLES 
Sbjct: 40  LTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESL 99

Query: 464 ---------LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
                    LPNEIG L+ LQ L L  N+L++ P+ IG L NL  L++ +N L ++P EI
Sbjct: 100 DLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEI 159

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           G L+NL  L L  N  L  +P E+    NLQ ++L +  L+ +P EI
Sbjct: 160 GQLQNLEKLNLRKNR-LTVLPKEIGQLQNLQTLNLQDNQLATLPVEI 205


>gi|124002081|ref|ZP_01686935.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992547|gb|EAY31892.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 529

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 143/410 (34%), Positives = 217/410 (52%), Gaps = 26/410 (6%)

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
           +  +V NL  L L ++ LT+LP  +  L  LR L+L +NKL  +P  + +L  L+ L L 
Sbjct: 58  EFNFVQNLRYLSLWKDDLTALPPEVLQLSNLRQLNLGYNKLTTIPPELNQLKYLQALSLV 117

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N+I ++ P I  L +L  L++  N++R+LPPELG LK+L  LDL  NHLE  P+ IG  
Sbjct: 118 HNQITSLSPAIGQLKHLQELNLWSNRLRDLPPELGNLKSLQLLDLVDNHLEVFPEGIGKL 177

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L  L+L+HN L  +P  +GNL  L +L L  N L+++P+ + K   L    +    L+
Sbjct: 178 LNLQQLNLEHNRLAVLPKTVGNLTQLEKLELGNNELKALPDAIGKLKKLQVLEISRNQLA 237

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI------ 375
            LP   +  L  +  + LS N+ +  P+       ++  +N  +NQ+ ++P  I      
Sbjct: 238 CLPTS-IGQLQQLEQLDLSSNQLSQLPA-ELKGLENLQQLNLMYNQLAQLPTTIGQLKQL 295

Query: 376 ----------------FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS 419
                             + +NL ++N+ DN LT+LP  +G    L EL L  N+I++L 
Sbjct: 296 QNLNLWNNLLTALPTTIGQLQNLQRLNIADNRLTALPEQIGMLTKLIELKLENNEITRLP 355

Query: 420 EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLIL 479
             I  L ++  + L +NL+  LP+ IGNL   + LDL  N+L +LP  IG L+ L  L L
Sbjct: 356 PSIGQLSHVAEIRLEHNLITDLPTEIGNLY-CRQLDLSSNRLTTLPLSIGGLQCL-SLNL 413

Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
             N L  LP  IG  T+L  L++  N L  +P  IG +ENL  L L+DN 
Sbjct: 414 SYNALSYLPLTIGQWTDLMMLNLSSNQLSYLPSTIGEMENLQDLDLSDNA 463



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 135/411 (32%), Positives = 215/411 (52%), Gaps = 32/411 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE--------- 156
           L L  + IT L P++ +L HL+EL L+ N+L  LP ++G + +L  L L +         
Sbjct: 114 LSLVHNQITSLSPAIGQLKHLQELNLWSNRLRDLPPELGNLKSLQLLDLVDNHLEVFPEG 173

Query: 157 --------------NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
                         N L  LP ++ NL QL  L+L +N+L  LP  + KL  L++L +  
Sbjct: 174 IGKLLNLQQLNLEHNRLAVLPKTVGNLTQLEKLELGNNELKALPDAIGKLKKLQVLEISR 233

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N++  +   I  L  L  L +  N++ +LP EL  L+NL  L+L +N L +LP  IG   
Sbjct: 234 NQLACLPTSIGQLQQLEQLDLSSNQLSQLPAELKGLENLQQLNLMYNQLAQLPTTIGQLK 293

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  L+L +N L  +P  +G L NL RL ++ NRL ++PE +     L E  +E   ++ 
Sbjct: 294 QLQNLNLWNNLLTALPTTIGQLQNLQRLNIADNRLTALPEQIGMLTKLIELKLENNEITR 353

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVY--SINFEHNQIDKIPYGIFSRAK 380
           LP   +  L+ +  I L  N  T      PT+  ++Y   ++   N++  +P  I    +
Sbjct: 354 LPPS-IGQLSHVAEIRLEHNLITDL----PTEIGNLYCRQLDLSSNRLTTLPLSI-GGLQ 407

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
            LS +N+  N L+ LPL +G W  L  LNL +NQ+S L   I  + NL+ L LS+N L  
Sbjct: 408 CLS-LNLSYNALSYLPLTIGQWTDLMMLNLSSNQLSYLPSTIGEMENLQDLDLSDNALSY 466

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
           LP+++GNL+ L+ L+L  N+L +   ++  L  L+ L+L  N + +  +AI
Sbjct: 467 LPATMGNLKSLRKLNLSGNQLTAFAFDLQNLSHLKELVLLGNPISTETKAI 517



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 140/427 (32%), Positives = 229/427 (53%), Gaps = 5/427 (1%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L+L  + +T +PP + +L +L+ L L  N++ SL   IG + +L  L L  N L  
Sbjct: 87  NLRQLNLGYNKLTTIPPELNQLKYLQALSLVHNQITSLSPAIGQLKHLQELNLWSNRLRD 146

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  L NL+ L++LDL  N L   P  + KL +L+ L L  NR+  +   +  L+ L  L
Sbjct: 147 LPPELGNLKSLQLLDLVDNHLEVFPEGIGKLLNLQQLNLEHNRLAVLPKTVGNLTQLEKL 206

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + +N+++ LP  +G+LK L  L+++ N L  LP  IG    L  LDL  N+L  +P  L
Sbjct: 207 ELGNNELKALPDAIGKLKKLQVLEISRNQLACLPTSIGQLQQLEQLDLSSNQLSQLPAEL 266

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL +L L YN+L  +P T+ +   L   N+    L++LP   +  L ++  + ++ 
Sbjct: 267 KGLENLQQLNLMYNQLAQLPTTIGQLKQLQNLNLWNNLLTALPTT-IGQLQNLQRLNIAD 325

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ TA P       T +  +  E+N+I ++P  I  +  +++++ ++ NL+T LP ++G 
Sbjct: 326 NRLTALPE-QIGMLTKLIELKLENNEITRLPPSI-GQLSHVAEIRLEHNLITDLPTEIGN 383

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
            +   +L+L +N+++ L   I  L  L  L LS N L  LP +IG    L  L+L  N+L
Sbjct: 384 -LYCRQLDLSSNRLTTLPLSIGGLQCLS-LNLSYNALSYLPLTIGQWTDLMMLNLSSNQL 441

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
             LP+ IG ++ LQ L L  N L  LP  +G+L +L  L++  N L +   ++  L +L 
Sbjct: 442 SYLPSTIGEMENLQDLDLSDNALSYLPATMGNLKSLRKLNLSGNQLTAFAFDLQNLSHLK 501

Query: 522 TLYLNDN 528
            L L  N
Sbjct: 502 ELVLLGN 508



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 2/206 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+++ + +T LP  +  LT L EL L  N++  LP  IG ++++  + L  N +T
Sbjct: 316 QNLQRLNIADNRLTALPEQIGMLTKLIELKLENNEITRLPPSIGQLSHVAEIRLEHNLIT 375

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  + NL   R LDL  N+L  LP+ +  L  L  L L +N +  +   I   ++L M
Sbjct: 376 DLPTEIGNLY-CRQLDLSSNRLTTLPLSIGGLQCLS-LNLSYNALSYLPLTIGQWTDLMM 433

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  N++  LP  +GE++NL  LDL+ N L  LP  +GN   L  L+L  N+L      
Sbjct: 434 LNLSSNQLSYLPSTIGEMENLQDLDLSDNALSYLPATMGNLKSLRKLNLSGNQLTAFAFD 493

Query: 281 LGNLINLTRLRLSYNRLESVPETLSK 306
           L NL +L  L L  N + +  + + K
Sbjct: 494 LQNLSHLKELVLLGNPISTETKAIVK 519


>gi|418755319|ref|ZP_13311526.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964330|gb|EKO32220.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 492

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 139/373 (37%), Positives = 208/373 (55%), Gaps = 26/373 (6%)

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           + + L +LP  +  LQ LR LDL  N+L  LP  + KL +L+ L L  NR+  +  +I  
Sbjct: 120 SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGK 179

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL  L + DN++  LP E+ +L+NL  L L +N L  LPKEIG    L  L L++N+L
Sbjct: 180 LQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQL 239

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +G L NL  L LS N+L ++P+ + K  HL E ++E   L++LP  +   L ++
Sbjct: 240 TTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEI-GKLQNL 298

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + L  N+ T  P                  +I+K+        + L K+    N  T+
Sbjct: 299 QELRLDYNRLTTLPE-----------------EIEKL--------QKLKKLYSSGNQFTT 333

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           +P ++     L  LNL +NQ++ L ++I NL NL++L LS+N L  LP  IG L+ L+ L
Sbjct: 334 VPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLL 393

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            L +N+L +LP EIG L+ LQ L L  NQL +LP+ I +L +L YL + +N L S PEEI
Sbjct: 394 YLSDNQLTTLPKEIGKLQNLQELYLSDNQLATLPKEIENLQSLEYLYLSDNPLTSFPEEI 453

Query: 515 GTLENLHTLYLND 527
           G L++L  L L +
Sbjct: 454 GKLQHLKWLRLEN 466



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 134/360 (37%), Positives = 205/360 (56%), Gaps = 16/360 (4%)

Query: 209 HP-DIQYLSNLSMLSMRDNK-----IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           HP D+QYL     L  R+ K     +  LP E+G+L+NL  LDL+ N L  LPKEIG   
Sbjct: 103 HPTDVQYL----YLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQ 158

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  L+L  N L N+P+ +G L NL  L L+ N+L ++P+ + K  +L    +    L++
Sbjct: 159 NLQKLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTT 218

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
           LP  +   L  +  + L  N+ T  P   G  Q  ++  +   +NQ+  +P  I  + ++
Sbjct: 219 LPKEI-GKLQKLEALHLENNQLTTLPKEIGKLQ--NLQWLGLSNNQLTTLPKEI-GKLQH 274

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           L ++++++N LT+LP ++G    L EL L  N+++ L E+I+ L  L+ L  S N    +
Sbjct: 275 LQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTV 334

Query: 442 PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLS 501
           P  I NL+ L+ L+L  N+L SLP EIG L+ LQ L L  NQL +LP+ IG L NL  L 
Sbjct: 335 PEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLY 394

Query: 502 VGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           + +N L ++P+EIG L+NL  LYL+DN  L  +P E+    +L+ + L + PL+  P EI
Sbjct: 395 LSDNQLTTLPKEIGKLQNLQELYLSDNQ-LATLPKEIENLQSLEYLYLSDNPLTSFPEEI 453



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 139/410 (33%), Positives = 215/410 (52%), Gaps = 36/410 (8%)

Query: 53  DNKKCGVDVKKTVTVKHPESNK-----PKPTTKKKEPIQADLNIEKEFLRCKEENILNLD 107
           + K+ GV    T  ++HP   +     P+      +P+     + KE    K +N+ +LD
Sbjct: 87  EAKEKGVYYNLTEALQHPTDVQYLYLGPRERKNSNDPLWT---LPKEI--GKLQNLRDLD 141

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           LS + +  LP  + KL +L++L L  N+LA+LP +IG + NL  L L +N LT+LP  + 
Sbjct: 142 LSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLPKEIE 201

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
            LQ L+ L L +N+L  LP  + KL  L+ L+L  N++ T                    
Sbjct: 202 KLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTT-------------------- 241

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
              LP E+G+L+NL  L L++N L  LPKEIG    L  L L++N+L  +P  +G L NL
Sbjct: 242 ---LPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNL 298

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             LRL YNRL ++PE + K   L +    G   +++P+ +  +L ++  + L  N+ T+ 
Sbjct: 299 QELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIW-NLQNLQALNLYSNQLTSL 357

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
           P               + NQ+  +P  I  + +NL  + + DN LT+LP ++G    L E
Sbjct: 358 PKEIGNLQNLQLLYLSD-NQLATLPKEI-GKLQNLQLLYLSDNQLTTLPKEIGKLQNLQE 415

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           L L  NQ++ L ++I+NL +LE L LS+N L   P  IG L+ LK L LE
Sbjct: 416 LYLSDNQLATLPKEIENLQSLEYLYLSDNPLTSFPEEIGKLQHLKWLRLE 465


>gi|440802335|gb|ELR23264.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 845

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 139/403 (34%), Positives = 211/403 (52%), Gaps = 4/403 (0%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANL-QQLRVLDLRHNKLNELP- 186
           L L G KL +LP  +  +  L+ L ++ N LT+L D +  L   L  L +  NKL  LP 
Sbjct: 14  LDLQGFKLRALPKGLFDLKELSALNVSSNDLTALEDEVVRLLPALTSLRINGNKLTGLPS 73

Query: 187 MVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDL 246
           +    L  L++L +  NR++++   +  LS L  L    N + +LPP +GEL NL  LDL
Sbjct: 74  LGSGALKELEVLDVGKNRLRSLPGSVGDLSALVRLIAHCNLLEDLPPGVGELANLTVLDL 133

Query: 247 AHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK 306
           + N+L++LP E+G    L +LD+ +N L  +P   G+L +LT+L  + N     PE++ +
Sbjct: 134 STNNLKQLPPEVGKLHALKSLDIDNNRLKTLPPEFGDLGSLTQLTCANNLFSHFPESICR 193

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
              L   N+    ++ LPD +     SI  + LS N+F  +P        S+ +++F  N
Sbjct: 194 LGFLKTLNISCNRITQLPDAIAQLGDSITELDLSGNRFVTFPES-LAGCRSLITLDFRDN 252

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
            +  +   I S+   L+ +N+  N LT+LP  +G    L ELNL  N+I+ L  ++ +L 
Sbjct: 253 NLCDLADNI-SQLCELATLNLSHNKLTTLPRQIGEMTVLMELNLSKNKIAHLPPELGHLS 311

Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
            L  L LS N L  LP  + N+  ++ LDL  N L+ LP EI  L +LQ L L  N L  
Sbjct: 312 FLGKLYLSRNALATLPIELSNIAFIQELDLSNNGLDDLPIEIFKLDKLQTLKLDCNNLTH 371

Query: 487 LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
           LP  +GHL  L +L V  N L ++P EI  L  L  L +  N 
Sbjct: 372 LPPELGHLFRLQHLYVSNNQLTTLPAEISQLSRLQVLSIYQNA 414



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 144/455 (31%), Positives = 237/455 (52%), Gaps = 30/455 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS +++  LPP V KL  L+ L +  N+L +LP + G + +LT L  A N  + 
Sbjct: 127 NLTVLDLSTNNLKQLPPEVGKLHALKSLDIDNNRLKTLPPEFGDLGSLTQLTCANNLFSH 186

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSM 220
            P+S+  L  L+ L++  N++ +LP  + +L  S+  L L  NR  T    +    +L  
Sbjct: 187 FPESICRLGFLKTLNISCNRITQLPDAIAQLGDSITELDLSGNRFVTFPESLAGCRSLIT 246

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L  RDN + +L   + +L  L TL+L+HN L  LP++IG  T+L+ L+L  N++ ++P  
Sbjct: 247 LDFRDNNLCDLADNISQLCELATLNLSHNKLTTLPRQIGEMTVLMELNLSKNKIAHLPPE 306

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP------DGLLSSLTSI 334
           LG+L  L +L LS N L ++P  LS    + E ++    L  LP      D L +     
Sbjct: 307 LGHLSFLGKLYLSRNALATLPIELSNIAFIQELDLSNNGLDDLPIEIFKLDKLQTLKLDC 366

Query: 335 NNIT----------------LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
           NN+T                +S N+ T  P+   +Q + +  ++   N I ++P G+ + 
Sbjct: 367 NNLTHLPPELGHLFRLQHLYVSNNQLTTLPAE-ISQLSRLQVLSIYQNAIKQLPDGMGA- 424

Query: 379 AKNLSKVNMKDNLLTS---LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
            K++  + + DNLL       L+  T   L +L L  N+++ + E + NL +L+ L LS 
Sbjct: 425 LKHIESICLGDNLLDESGLAALEKATMPALEQLVLSGNRLTSIPEGLCNLASLKELYLSR 484

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N + +LP +I  L K++  DL +N + +LP+ I  L  L+ + L  N+L SLP     LT
Sbjct: 485 NEIAELPEAITRLNKIRIFDLSDNAIAALPSFISSLHSLREINLSYNRLSSLPPEFVKLT 544

Query: 496 NLSYLSVGENNLQSIPEEIGTL--ENLHTLYLNDN 528
           NL  L +  NNL  +PE++  +   N + + L DN
Sbjct: 545 NLCVLYLMHNNLTDLPEDLQAMRYRNCYHMDLEDN 579



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 241/488 (49%), Gaps = 36/488 (7%)

Query: 105 NLDLSKSSITHLPP-SVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLP 163
           +L ++ + +T LP      L  LE L +  N+L SLP  +G ++ L  L    N L  LP
Sbjct: 60  SLRINGNKLTGLPSLGSGALKELEVLDVGKNRLRSLPGSVGDLSALVRLIAHCNLLEDLP 119

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
             +  L  L VLDL  N L +LP  V KL +LK L +  NR+KT+ P+   L +L+ L+ 
Sbjct: 120 PGVGELANLTVLDLSTNNLKQLPPEVGKLHALKSLDIDNNRLKTLPPEFGDLGSLTQLTC 179

Query: 224 RD-----------------------NKIRELPPELGELKNLVT-LDLAHNHLEELPKEIG 259
            +                       N+I +LP  + +L + +T LDL+ N     P+ + 
Sbjct: 180 ANNLFSHFPESICRLGFLKTLNISCNRITQLPDAIAQLGDSITELDLSGNRFVTFPESLA 239

Query: 260 NCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA 319
            C  L+TLD + N L ++ D +  L  L  L LS+N+L ++P  + +   L E N+    
Sbjct: 240 GCRSLITLDFRDNNLCDLADNISQLCELATLNLSHNKLTTLPRQIGEMTVLMELNLSKNK 299

Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           ++ LP   L  L+ +  + LSRN     P    +    +  ++  +N +D +P  IF   
Sbjct: 300 IAHLPPE-LGHLSFLGKLYLSRNALATLPI-ELSNIAFIQELDLSNNGLDDLPIEIFKLD 357

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           K L  + +  N LT LP +LG    L  L +  NQ++ L  +I  L  L+VL +  N +K
Sbjct: 358 K-LQTLKLDCNNLTHLPPELGHLFRLQHLYVSNNQLTTLPAEISQLSRLQVLSIYQNAIK 416

Query: 440 KLPSSIGNLRKLK--CLD---LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
           +LP  +G L+ ++  CL    L+E+ L +L  E   +  L++L+L  N+L S+P  + +L
Sbjct: 417 QLPDGMGALKHIESICLGDNLLDESGLAAL--EKATMPALEQLVLSGNRLTSIPEGLCNL 474

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
            +L  L +  N +  +PE I  L  +    L+DN  +  +P  ++   +L+ ++L    L
Sbjct: 475 ASLKELYLSRNEIAELPEAITRLNKIRIFDLSDN-AIAALPSFISSLHSLREINLSYNRL 533

Query: 555 SQIPSEIV 562
           S +P E V
Sbjct: 534 SSLPPEFV 541



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 163/358 (45%), Gaps = 30/358 (8%)

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI-NLTR 289
           +  ++   +    LDL    L  LPK + +   L  L++  N+L  + D +  L+  LT 
Sbjct: 1   MEAKIATARQTFALDLQGFKLRALPKGLFDLKELSALNVSSNDLTALEDEVVRLLPALTS 60

Query: 290 LRLSYNRLESVPETLSKCV-HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
           LR++ N+L  +P   S  +  L   +V    L SLP G +  L+++  +    N     P
Sbjct: 61  LRINGNKLTGLPSLGSGALKELEVLDVGKNRLRSLP-GSVGDLSALVRLIAHCNLLEDLP 119

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
             G  +  ++  ++   N + ++P  +  +   L  +++ +N L +LP + G    LT+L
Sbjct: 120 P-GVGELANLTVLDLSTNNLKQLPPEV-GKLHALKSLDIDNNRLKTLPPEFGDLGSLTQL 177

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL-------------------- 448
               N  S   E I  L  L+ L +S N + +LP +I  L                    
Sbjct: 178 TCANNLFSHFPESICRLGFLKTLNISCNRITQLPDAIAQLGDSITELDLSGNRFVTFPES 237

Query: 449 ----RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
               R L  LD  +N L  L + I  L EL  L L  N+L +LPR IG +T L  L++ +
Sbjct: 238 LAGCRSLITLDFRDNNLCDLADNISQLCELATLNLSHNKLTTLPRQIGEMTVLMELNLSK 297

Query: 505 NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           N +  +P E+G L  L  LYL+ N  L  +P EL+  + +Q + L N  L  +P EI 
Sbjct: 298 NKIAHLPPELGHLSFLGKLYLSRN-ALATLPIELSNIAFIQELDLSNNGLDDLPIEIF 354


>gi|418744943|ref|ZP_13301288.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794274|gb|EKR92184.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 526

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 138/373 (36%), Positives = 208/373 (55%), Gaps = 26/373 (6%)

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           + + L +LP  +  LQ LR LDL  N+L  LP  + KL +L+ L L  NR+  +  +I  
Sbjct: 154 SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGK 213

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL  L + DN++  LP E+ +L+NL  L L +N L  LPKEIG    L  L L++N+L
Sbjct: 214 LQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQL 273

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +G L NL  L LS N+L ++P+ + K  HL E ++E   L++LP  +   L ++
Sbjct: 274 TTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEI-GKLQNL 332

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + L  N+ T  P                  +I+K+        + L K+    N  T+
Sbjct: 333 QELRLDYNRLTTLPE-----------------EIEKL--------QKLKKLYSSGNQFTT 367

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           +P ++     L  LNL +NQ++ L ++I NL NL++L LS+N L  LP  IG L+ L+ L
Sbjct: 368 VPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLL 427

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            L +N+L +LP EIG L+ LQ L L+ NQL +LP+ I +L +L YL + +N L S PEEI
Sbjct: 428 YLSDNQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEIENLQSLEYLYLSDNPLTSFPEEI 487

Query: 515 GTLENLHTLYLND 527
           G L++L    L +
Sbjct: 488 GKLQHLKWFRLEN 500



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 134/360 (37%), Positives = 204/360 (56%), Gaps = 16/360 (4%)

Query: 209 HP-DIQYLSNLSMLSMRDNK-----IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           HP D+QYL     L  R+ K     +  LP E+G+L+NL  LDL+ N L  LPKEIG   
Sbjct: 137 HPTDVQYL----YLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQ 192

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  L+L  N L N+P+ +G L NL  L L+ N+L ++P+ + K  +L    +    L++
Sbjct: 193 NLQKLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTT 252

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
           LP  +   L  +  + L  N+ T  P   G  Q  ++  +   +NQ+  +P  I  + ++
Sbjct: 253 LPKEI-GKLQKLEALHLENNQLTTLPKEIGKLQ--NLQWLGLSNNQLTTLPKEI-GKLQH 308

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           L ++++++N LT+LP ++G    L EL L  N+++ L E+I+ L  L+ L  S N    +
Sbjct: 309 LQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTV 368

Query: 442 PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLS 501
           P  I NL+ L+ L+L  N+L SLP EIG L+ LQ L L  NQL +LP+ IG L NL  L 
Sbjct: 369 PEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLY 428

Query: 502 VGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           + +N L ++P+EIG L+NL  LYL DN  L  +P E+    +L+ + L + PL+  P EI
Sbjct: 429 LSDNQLTTLPKEIGKLQNLQELYLRDNQ-LTTLPKEIENLQSLEYLYLSDNPLTSFPEEI 487



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 128/367 (34%), Positives = 200/367 (54%), Gaps = 26/367 (7%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L +LP +IG + NL  L L+ N L +LP  +  LQ L+ L+L  N+L  LP  + KL +L
Sbjct: 158 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNL 217

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           + L+L  N++ T+  +I+ L NL  L + +N++  LP E+G+L+ L  L L +N L  LP
Sbjct: 218 QELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLP 277

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
           KEIG    L  L L +N+L  +P  +G L +L  L L  N+L ++P+ + K  +L E  +
Sbjct: 278 KEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRL 337

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
           +   L++LP+ +   L  +  +  S N+FT  P         ++++              
Sbjct: 338 DYNRLTTLPEEI-EKLQKLKKLYSSGNQFTTVPE-------EIWNL-------------- 375

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
               +NL  +N+  N LTSLP ++G    L  L L  NQ++ L ++I  L NL++L LS+
Sbjct: 376 ----QNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSD 431

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N L  LP  IG L+ L+ L L +N+L +LP EI  L+ L+ L L  N L S P  IG L 
Sbjct: 432 NQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEIENLQSLEYLYLSDNPLTSFPEEIGKLQ 491

Query: 496 NLSYLSV 502
           +L +  +
Sbjct: 492 HLKWFRL 498



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 138/410 (33%), Positives = 214/410 (52%), Gaps = 36/410 (8%)

Query: 53  DNKKCGVDVKKTVTVKHPESNK-----PKPTTKKKEPIQADLNIEKEFLRCKEENILNLD 107
           + K+ GV    T  ++HP   +     P+      +P+     + KE    K +N+ +LD
Sbjct: 121 EAKEKGVYYNLTEALQHPTDVQYLYLGPRERKNSNDPLWT---LPKEI--GKLQNLRDLD 175

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           LS + +  LP  + KL +L++L L  N+LA+LP +IG + NL  L L +N LT+LP  + 
Sbjct: 176 LSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLPKEIE 235

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
            LQ L+ L L +N+L  LP  + KL  L+ L+L  N++ T                    
Sbjct: 236 KLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTT-------------------- 275

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
              LP E+G+L+NL  L L++N L  LPKEIG    L  L L++N+L  +P  +G L NL
Sbjct: 276 ---LPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNL 332

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             LRL YNRL ++PE + K   L +    G   +++P+ +  +L ++  + L  N+ T+ 
Sbjct: 333 QELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIW-NLQNLQALNLYSNQLTSL 391

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
           P               + NQ+  +P  I  + +NL  + + DN LT+LP ++G    L E
Sbjct: 392 PKEIGNLQNLQLLYLSD-NQLATLPKEI-GKLQNLQLLYLSDNQLTTLPKEIGKLQNLQE 449

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           L L  NQ++ L ++I+NL +LE L LS+N L   P  IG L+ LK   LE
Sbjct: 450 LYLRDNQLTTLPKEIENLQSLEYLYLSDNPLTSFPEEIGKLQHLKWFRLE 499


>gi|417780635|ref|ZP_12428396.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410779344|gb|EKR63961.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 542

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 169/475 (35%), Positives = 247/475 (52%), Gaps = 36/475 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +  LP  + +L +L+ELYL  N+L ++P +IG + NL  L L +N L + P  
Sbjct: 47  LNLSGQELATLPKEIGQLQNLQELYLQWNQLIAIPKEIGQLQNLQTLDLRDNQLVTFPKE 106

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L +LDL  N+L  LP  +  L SL+ L L  N++ T+  +I  L NL  L    
Sbjct: 107 MVELQKLEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTLPKEIGQLQNLQELWSPG 166

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL TL+LA+N L  LPKEIG    L TLDL+ N+L+ +P  +G L 
Sbjct: 167 NRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLDLRDNQLIILPKEIGQLQ 226

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTS----INNITL 339
           NL  L L  NRL + P+ + +  +L   N+    L++ P   G L +L      IN ++L
Sbjct: 227 NLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLRDLELLINPLSL 286

Query: 340 SRNKFTA--YPSGGPTQFTSVYSINFEHN---------QIDK--IPYGIFSRAKNLSKVN 386
              K     +P+        V      HN         Q+ +  I Y  FS+        
Sbjct: 287 KERKRIQKLFPNSN-LDLREVAKDGVYHNLNLAQEEPLQVLELSIAYKSFSQL------- 338

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
                    P ++  +  L  L L       + ++I  L NL+ L+L  N L  LPS+IG
Sbjct: 339 --------FPKEILKFRNLQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTIG 390

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            LR L+ L+LE N LESLP EI  L+ L  L L  N+L + P+ I  L  L  L +  N 
Sbjct: 391 QLRNLRGLNLEANLLESLPKEIARLRNLHTLRLHQNKLKTFPKEILQLGKLQKLDLSANE 450

Query: 507 LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+ +PE++  L+NL  L L+ N  L  +P E+A   NLQ + L+   L+ +PSEI
Sbjct: 451 LKILPEKLERLQNLQELDLSHNQ-LTILPKEIAKLQNLQELHLNGNQLTTLPSEI 504



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 140/448 (31%), Positives = 223/448 (49%), Gaps = 33/448 (7%)

Query: 143 IGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           I ++  L    + + + T L  +L N  ++RVL+L   +L  LP  + +L +L+ LYL++
Sbjct: 15  ICFICELQAEEVEQGTYTDLTKALQNPSKVRVLNLSGQELATLPKEIGQLQNLQELYLQW 74

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N++  +  +I  L NL  L +RDN++   P E+ EL+ L  LDL+ N L  LP EIG   
Sbjct: 75  NQLIAIPKEIGQLQNLQTLDLRDNQLVTFPKEMVELQKLEMLDLSENRLIILPAEIGLLQ 134

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L +L L  N+L  +P  +G L NL  L    NRL ++P+ + +  +L   N+    L++
Sbjct: 135 SLQSLSLYKNKLTTLPKEIGQLQNLQELWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTA 194

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LP   +  L ++  + L  N+    P     Q  ++ ++N  +N++   P  I  + +NL
Sbjct: 195 LPKE-IGQLQNLQTLDLRDNQLIILPK-EIGQLQNLQTLNLVNNRLTTFPKEI-GQLQNL 251

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLV--------------- 426
             +N+ +N LT+ P ++G    L +L L  N +S K  + IQ L                
Sbjct: 252 QTLNLVNNRLTTFPKEIGQLQNLRDLELLINPLSLKERKRIQKLFPNSNLDLREVAKDGV 311

Query: 427 ----------NLEVLVLS---NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
                      L+VL LS    +  +  P  I   R L+ L L +    ++P EIG LK 
Sbjct: 312 YHNLNLAQEEPLQVLELSIAYKSFSQLFPKEILKFRNLQSLYLYDCGFPTVPKEIGRLKN 371

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L+ L+L  N L +LP  IG L NL  L++  N L+S+P+EI  L NLHTL L+ N  L  
Sbjct: 372 LKYLLLGLNGLHNLPSTIGQLRNLRGLNLEANLLESLPKEIARLRNLHTLRLHQNK-LKT 430

Query: 534 IPFELALCSNLQIMSLDNCPLSQIPSEI 561
            P E+     LQ + L    L  +P ++
Sbjct: 431 FPKEILQLGKLQKLDLSANELKILPEKL 458



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 111/211 (52%), Gaps = 6/211 (2%)

Query: 103 ILNLDLSKSSITHL-PPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           +L L ++  S + L P  + K  +L+ LYLY     ++P +IG + NL  L L  N L +
Sbjct: 325 VLELSIAYKSFSQLFPKEILKFRNLQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHN 384

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP ++  L+ LR L+L  N L  LP  + +L +L  L L  N++KT   +I  L  L  L
Sbjct: 385 LPSTIGQLRNLRGLNLEANLLESLPKEIARLRNLHTLRLHQNKLKTFPKEILQLGKLQKL 444

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N+++ LP +L  L+NL  LDL+HN L  LPKEI     L  L L  N+L  +P  +
Sbjct: 445 DLSANELKILPEKLERLQNLQELDLSHNQLTILPKEIAKLQNLQELHLNGNQLTTLPSEI 504

Query: 282 GNLINLTRLRLSYNRL-----ESVPETLSKC 307
           G L  L  LRL  N       E + + L KC
Sbjct: 505 GFLKKLKILRLYQNEFSSEEKERIQKLLPKC 535


>gi|255089727|ref|XP_002506785.1| predicted protein [Micromonas sp. RCC299]
 gi|226522058|gb|ACO68043.1| predicted protein [Micromonas sp. RCC299]
          Length = 394

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/331 (36%), Positives = 191/331 (57%), Gaps = 4/331 (1%)

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           +P ELG L  L  L+L  N L  +P EIG  T L  L L  N+L ++P  +G L +L  L
Sbjct: 42  VPAELGRLSALRKLNLGRNQLTSVPAEIGQLTSLEELRLDRNQLTSVPAEIGQLTSLEVL 101

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L  N+L SVP  + +   L  F +    L+SLP  +   LT +  ++L+RN+ T+ P+ 
Sbjct: 102 YLESNQLTSVPAEIGQLASLEVFYLSRNQLTSLPAEI-GQLTLLEGLSLARNQLTSVPAE 160

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              Q T++ ++    NQ+  +P  I  +  +L ++ +  N LTS+P D+G    L  L+L
Sbjct: 161 -IWQITALEALWLNENQLTSLPAEI-GQLTSLKELGLGGNQLTSVPADIGQLTLLEGLSL 218

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
            +NQ++ +  +I  L +L+ L L  N L  +P+ IG L  L+ L+LE N+L S+P EIG 
Sbjct: 219 DSNQLTSVPAEIGQLASLKFLHLQGNQLASVPAEIGQLTLLEGLNLESNQLTSVPAEIGQ 278

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+RLIL  NQL S+P  IG L++L  L++  N L S+P EIG L +L  L+L+ N  
Sbjct: 279 LASLKRLILSRNQLTSVPAEIGQLSSLDGLNLERNQLTSVPAEIGQLASLKLLHLSYNQ- 337

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++P E+   ++L+ + L+N  L+ +P+ I
Sbjct: 338 LTSVPAEIWQLASLEWLWLNNNELTSVPAAI 368



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/348 (34%), Positives = 187/348 (53%), Gaps = 26/348 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+L ++ +T +P  + +LT LEEL L  N+L S+P++IG +T+L  L L  N LTS+P  
Sbjct: 55  LNLGRNQLTSVPAEIGQLTSLEELRLDRNQLTSVPAEIGQLTSLEVLYLESNQLTSVPAE 114

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L V  L  N+L  LP  + +LT L+ L L  N++ +V  +I  ++ L  L + +
Sbjct: 115 IGQLASLEVFYLSRNQLTSLPAEIGQLTLLEGLSLARNQLTSVPAEIWQITALEALWLNE 174

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L +L  L L  N L  +P +IG  T+L  L L  N+L ++P  +G L 
Sbjct: 175 NQLTSLPAEIGQLTSLKELGLGGNQLTSVPADIGQLTLLEGLSLDSNQLTSVPAEIGQLA 234

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L  L L  N+L SVP  + +   L   N+E   L+S+P   +  L S+  + LSRN+ T
Sbjct: 235 SLKFLHLQGNQLASVPAEIGQLTLLEGLNLESNQLTSVPAE-IGQLASLKRLILSRNQLT 293

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P+    Q +S+  +N E NQ                        LTS+P ++G    L
Sbjct: 294 SVPA-EIGQLSSLDGLNLERNQ------------------------LTSVPAEIGQLASL 328

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
             L+L  NQ++ +  +I  L +LE L L+NN L  +P++I  LR   C
Sbjct: 329 KLLHLSYNQLTSVPAEIWQLASLEWLWLNNNELTSVPAAIRELRAAGC 376



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 193/370 (52%), Gaps = 27/370 (7%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++P  L  L  LR L+L  N+L  +P  + +LTSL+ L L  N++ +V  +I  L++L +
Sbjct: 41  AVPAELGRLSALRKLNLGRNQLTSVPAEIGQLTSLEELRLDRNQLTSVPAEIGQLTSLEV 100

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  +P E+G+L +L    L+ N L  LP EIG  T+L  L L  N+L ++P  
Sbjct: 101 LYLESNQLTSVPAEIGQLASLEVFYLSRNQLTSLPAEIGQLTLLEGLSLARNQLTSVPAE 160

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  +  L  L L+ N+L S+P  + +   L E  + G  L+S+P  +   LT +  ++L 
Sbjct: 161 IWQITALEALWLNENQLTSLPAEIGQLTSLKELGLGGNQLTSVPADI-GQLTLLEGLSLD 219

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T+ P+    +   + S+ F H                     ++ N L S+P ++G
Sbjct: 220 SNQLTSVPA----EIGQLASLKFLH---------------------LQGNQLASVPAEIG 254

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  LNL +NQ++ +  +I  L +L+ L+LS N L  +P+ IG L  L  L+LE N+
Sbjct: 255 QLTLLEGLNLESNQLTSVPAEIGQLASLKRLILSRNQLTSVPAEIGQLSSLDGLNLERNQ 314

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L S+P EIG L  L+ L L  NQL S+P  I  L +L +L +  N L S+P  I  L   
Sbjct: 315 LTSVPAEIGQLASLKLLHLSYNQLTSVPAEIWQLASLEWLWLNNNELTSVPAAIRELRAA 374

Query: 521 HT-LYLNDNT 529
              +YL D  
Sbjct: 375 GCRVYLGDGV 384



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 190/370 (51%), Gaps = 30/370 (8%)

Query: 125 HLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNE 184
            LE++ L G    ++P+++G ++ L  L L  N LTS+P  +  L  L  L L  N+L  
Sbjct: 32  ELEDVGLTG----AVPAELGRLSALRKLNLGRNQLTSVPAEIGQLTSLEELRLDRNQLTS 87

Query: 185 LPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTL 244
           +P  + +LTSL++LYL  N++ +V  +I  L++L +  +  N++  LP E+G+L  L  L
Sbjct: 88  VPAEIGQLTSLEVLYLESNQLTSVPAEIGQLASLEVFYLSRNQLTSLPAEIGQLTLLEGL 147

Query: 245 DLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETL 304
            LA N L  +P EI   T L  L L  N+L ++P  +G L +L  L L  N+L SVP  +
Sbjct: 148 SLARNQLTSVPAEIWQITALEALWLNENQLTSLPAEIGQLTSLKELGLGGNQLTSVPADI 207

Query: 305 SKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFE 364
            +   L   +++   L+S+P  +   L S+  + L  N+  + P+    Q T +  +N E
Sbjct: 208 GQLTLLEGLSLDSNQLTSVPAEI-GQLASLKFLHLQGNQLASVPAE-IGQLTLLEGLNLE 265

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN 424
            NQ+  +P  I   A +L ++ +  N LTS+P ++G    L  LNL  NQ          
Sbjct: 266 SNQLTSVPAEIGQLA-SLKRLILSRNQLTSVPAEIGQLSSLDGLNLERNQ---------- 314

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
                        L  +P+ IG L  LK L L  N+L S+P EI  L  L+ L L +N+L
Sbjct: 315 -------------LTSVPAEIGQLASLKLLHLSYNQLTSVPAEIWQLASLEWLWLNNNEL 361

Query: 485 VSLPRAIGHL 494
            S+P AI  L
Sbjct: 362 TSVPAAIREL 371



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 114/329 (34%), Positives = 179/329 (54%), Gaps = 4/329 (1%)

Query: 207 TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
            V  ++  LS L  L++  N++  +P E+G+L +L  L L  N L  +P EIG  T L  
Sbjct: 41  AVPAELGRLSALRKLNLGRNQLTSVPAEIGQLTSLEELRLDRNQLTSVPAEIGQLTSLEV 100

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           L L+ N+L ++P  +G L +L    LS N+L S+P  + +   L   ++    L+S+P  
Sbjct: 101 LYLESNQLTSVPAEIGQLASLEVFYLSRNQLTSLPAEIGQLTLLEGLSLARNQLTSVPAE 160

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
           +   +T++  + L+ N+ T+ P+    Q TS+  +    NQ+  +P  I  +   L  ++
Sbjct: 161 IWQ-ITALEALWLNENQLTSLPAE-IGQLTSLKELGLGGNQLTSVPADI-GQLTLLEGLS 217

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           +  N LTS+P ++G    L  L+L  NQ++ +  +I  L  LE L L +N L  +P+ IG
Sbjct: 218 LDSNQLTSVPAEIGQLASLKFLHLQGNQLASVPAEIGQLTLLEGLNLESNQLTSVPAEIG 277

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            L  LK L L  N+L S+P EIG L  L  L L+ NQL S+P  IG L +L  L +  N 
Sbjct: 278 QLASLKRLILSRNQLTSVPAEIGQLSSLDGLNLERNQLTSVPAEIGQLASLKLLHLSYNQ 337

Query: 507 LQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
           L S+P EI  L +L  L+LN+N  L ++P
Sbjct: 338 LTSVPAEIWQLASLEWLWLNNNE-LTSVP 365



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 106/179 (59%), Gaps = 2/179 (1%)

Query: 384 KVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
           ++ ++D  LT ++P +LG    L +LNLG NQ++ +  +I  L +LE L L  N L  +P
Sbjct: 30  ELELEDVGLTGAVPAELGRLSALRKLNLGRNQLTSVPAEIGQLTSLEELRLDRNQLTSVP 89

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
           + IG L  L+ L LE N+L S+P EIG L  L+   L  NQL SLP  IG LT L  LS+
Sbjct: 90  AEIGQLTSLEVLYLESNQLTSVPAEIGQLASLEVFYLSRNQLTSLPAEIGQLTLLEGLSL 149

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             N L S+P EI  +  L  L+LN+N  L ++P E+   ++L+ + L    L+ +P++I
Sbjct: 150 ARNQLTSVPAEIWQITALEALWLNENQ-LTSLPAEIGQLTSLKELGLGGNQLTSVPADI 207


>gi|124006156|ref|ZP_01690992.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988333|gb|EAY27986.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 755

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 246/459 (53%), Gaps = 3/459 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L ++ + +T LP S+ KL  ++ L + G  L +LP+ +G   +L  L +A N + +
Sbjct: 242 NLEELRIASARLTQLPVSLGKLPAIKYLEVSGALLTTLPNILGQCFSLDQLNVANNEIRA 301

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LPDSL  L QL+ LD+ +N LN LP  +     L +L+++ N+IKT+  DI  L++L+  
Sbjct: 302 LPDSLGQLTQLKTLDVSNNLLNRLPNSMTACKLLTVLHIKNNQIKTLPADIGKLAHLTSF 361

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++  N++  LP  + E+  L  L L +N+L  LPK++G  + L  L + +N+L  +P+ +
Sbjct: 362 NVEHNQLGSLPESIAEISTLGNLFLNNNYLTSLPKQLGQLSCLTMLYVNNNQLTQLPESM 421

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L+NL  L L  N+L  +P+ + +  +L   N+       +P+ L   L  +  + +  
Sbjct: 422 VRLVNLRYLLLKRNKLRMLPKNIGQWRNLEVINLNHNQFDHIPETLF-DLPKLQGVNIRN 480

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+    PS    + T++ ++N   N I  +P  I     +L+ +++  N LT +P ++G 
Sbjct: 481 NRVAFIPSNV-GKATNLRNLNVSENCIRVLPASIGKLGTHLASLHLAKNQLTQVPEEIGN 539

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
            + L  L+L  NQ+++L   I  L NL+ L L+NN LK LP+++  L+ L+ L ++ N+L
Sbjct: 540 LLHLVTLDLSHNQLTELPTSITQLENLQELYLNNNQLKALPAALSRLKNLRVLKVDHNQL 599

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
           + L   +  L  L+ L    NQL +LP      + L  L +  N L  +P ++G L NL 
Sbjct: 600 KELSKGLDQLPFLKILTAAHNQLETLPVNFTRSSQLHQLVLSHNQLNVLPSDMGDLNNLV 659

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
            L L  N  L ++P  L  C  L+ + L++  L  I  E
Sbjct: 660 LLDLQGNV-LTDLPESLKQCRKLKKLLLNDNQLKSIKVE 697



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 153/483 (31%), Positives = 246/483 (50%), Gaps = 26/483 (5%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L ++KS   +LP  +++L +LE LYL    +   P  I  +T+L  L +   +L +
Sbjct: 173 NLKELTINKSVKLYLPDQLDQLKYLETLYLNNCSIDEFPKVISRITSLKKLQVYHCALPN 232

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           + ++++NL  L  L +   +L +LP+ + KL ++K L +    + T+   +    +L  L
Sbjct: 233 IDENISNLVNLEELRIASARLTQLPVSLGKLPAIKYLEVSGALLTTLPNILGQCFSLDQL 292

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++ +N+IR LP  LG+L  L TLD+++N L  LP  +  C +L  L +++N++  +P  +
Sbjct: 293 NVANNEIRALPDSLGQLTQLKTLDVSNNLLNRLPNSMTACKLLTVLHIKNNQIKTLPADI 352

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLT--SINN- 336
           G L +LT   + +N+L S+PE++++   L    +    L+SLP   G LS LT   +NN 
Sbjct: 353 GKLAHLTSFNVEHNQLGSLPESIAEISTLGNLFLNNNYLTSLPKQLGQLSCLTMLYVNNN 412

Query: 337 -----------------ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
                            + L RNK    P     Q+ ++  IN  HNQ D IP  +F   
Sbjct: 413 QLTQLPESMVRLVNLRYLLLKRNKLRMLPK-NIGQWRNLEVINLNHNQFDHIPETLFDLP 471

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL-VNLEVLVLSNNLL 438
           K L  VN+++N +  +P ++G    L  LN+  N I  L   I  L  +L  L L+ N L
Sbjct: 472 K-LQGVNIRNNRVAFIPSNVGKATNLRNLNVSENCIRVLPASIGKLGTHLASLHLAKNQL 530

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
            ++P  IGNL  L  LDL  N+L  LP  I  L+ LQ L L +NQL +LP A+  L NL 
Sbjct: 531 TQVPEEIGNLLHLVTLDLSHNQLTELPTSITQLENLQELYLNNNQLKALPAALSRLKNLR 590

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L V  N L+ + + +  L  L  L    N  L  +P      S L  + L +  L+ +P
Sbjct: 591 VLKVDHNQLKELSKGLDQLPFLKILTAAHNQ-LETLPVNFTRSSQLHQLVLSHNQLNVLP 649

Query: 559 SEI 561
           S++
Sbjct: 650 SDM 652



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 139/437 (31%), Positives = 226/437 (51%), Gaps = 32/437 (7%)

Query: 147 TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK 206
           TNL  L + ++    LPD L  L+ L  L L +  ++E P V+ ++TSLK L +    + 
Sbjct: 172 TNLKELTINKSVKLYLPDQLDQLKYLETLYLNNCSIDEFPKVISRITSLKKLQVYHCALP 231

Query: 207 TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
            +  +I  L NL  L +   ++ +LP  LG+L  +  L+++   L  LP  +G C  L  
Sbjct: 232 NIDENISNLVNLEELRIASARLTQLPVSLGKLPAIKYLEVSGALLTTLPNILGQCFSLDQ 291

Query: 267 LDLQHNELVNIPDMLG------------NLIN-----------LTRLRLSYNRLESVPET 303
           L++ +NE+  +PD LG            NL+N           LT L +  N+++++P  
Sbjct: 292 LNVANNEIRALPDSLGQLTQLKTLDVSNNLLNRLPNSMTACKLLTVLHIKNNQIKTLPAD 351

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSI 361
           + K  HL  FNVE   L SLP+  ++ ++++ N+ L+ N  T+ P   G  +  T +Y  
Sbjct: 352 IGKLAHLTSFNVEHNQLGSLPES-IAEISTLGNLFLNNNYLTSLPKQLGQLSCLTMLYVN 410

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
           N   NQ+ ++P  +  R  NL  + +K N L  LP ++G W  L  +NL  NQ   + E 
Sbjct: 411 N---NQLTQLPESMV-RLVNLRYLLLKRNKLRMLPKNIGQWRNLEVINLNHNQFDHIPET 466

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL-KELQRLILQ 480
           + +L  L+ + + NN +  +PS++G    L+ L++ EN +  LP  IG L   L  L L 
Sbjct: 467 LFDLPKLQGVNIRNNRVAFIPSNVGKATNLRNLNVSENCIRVLPASIGKLGTHLASLHLA 526

Query: 481 SNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELAL 540
            NQL  +P  IG+L +L  L +  N L  +P  I  LENL  LYLN+N  L  +P  L+ 
Sbjct: 527 KNQLTQVPEEIGNLLHLVTLDLSHNQLTELPTSITQLENLQELYLNNNQ-LKALPAALSR 585

Query: 541 CSNLQIMSLDNCPLSQI 557
             NL+++ +D+  L ++
Sbjct: 586 LKNLRVLKVDHNQLKEL 602



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 213/392 (54%), Gaps = 6/392 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  ++ + ++  + +  LP S+ +++ L  L+L  N L SLP Q+G ++ LT L +  N 
Sbjct: 354 KLAHLTSFNVEHNQLGSLPESIAEISTLGNLFLNNNYLTSLPKQLGQLSCLTMLYVNNNQ 413

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT LP+S+  L  LR L L+ NKL  LP  + +  +L+++ L  N+   +   +  L  L
Sbjct: 414 LTQLPESMVRLVNLRYLLLKRNKLRMLPKNIGQWRNLEVINLNHNQFDHIPETLFDLPKL 473

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC-TMLVTLDLQHNELVNI 277
             +++R+N++  +P  +G+  NL  L+++ N +  LP  IG   T L +L L  N+L  +
Sbjct: 474 QGVNIRNNRVAFIPSNVGKATNLRNLNVSENCIRVLPASIGKLGTHLASLHLAKNQLTQV 533

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P+ +GNL++L  L LS+N+L  +P ++++  +L E  +    L +LP   LS L ++  +
Sbjct: 534 PEEIGNLLHLVTLDLSHNQLTELPTSITQLENLQELYLNNNQLKALPAA-LSRLKNLRVL 592

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            +  N+     S G  Q   +  +   HNQ++ +P   F+R+  L ++ +  N L  LP 
Sbjct: 593 KVDHNQLKEL-SKGLDQLPFLKILTAAHNQLETLPVN-FTRSSQLHQLVLSHNQLNVLPS 650

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           D+G    L  L+L  N ++ L E ++    L+ L+L++N LK +   +   ++L+ L L+
Sbjct: 651 DMGDLNNLVLLDLQGNVLTDLPESLKQCRKLKKLLLNDNQLKSI--KVEGWQELQYLALK 708

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPR 489
            N++  LP  +  L  L+ L L +N + ++ +
Sbjct: 709 NNQIAVLPENLHQLIGLRTLYLNNNPITAIGK 740


>gi|359319031|ref|XP_003638976.1| PREDICTED: protein LAP2-like isoform 1 [Canis lupus familiaris]
          Length = 1372

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 218/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ I  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMIEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  LV++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  I   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMIEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|334325168|ref|XP_001366860.2| PREDICTED: protein LAP2 isoform 1 [Monodelphis domestica]
          Length = 1448

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 146/464 (31%), Positives = 218/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P GL+ SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIP-GLIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         ID +  GI S  ++L  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IDTVEEGI-SGCESLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    LT L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPESIGLLKKLTTLKIDENQLMYLPDSIGGLISIEELDCSFNEIEALPSSIGQLSNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIGF K +  L L SN+L +LP  +G +  L  +++ +N ++++P   
Sbjct: 328 AADHNYLQQLPPEIGFWKHVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRMKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +       Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDPETQKMVLTNYMFPQQP 431



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 162/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N ++++  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGLIGSLKQLTYLDVSKNNIDTVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP +IG L  L+ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISGCESLQDLLLSSNSLQQLPESIGLLKKLTTLKIDENQLMYLPDSIGGLISIEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   SN++  + D+  L Q+P EI
Sbjct: 308 FNE-IEALPSSIGQLSNIRTFAADHNYLQQLPPEI 341



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 157/312 (50%), Gaps = 15/312 (4%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L  LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   ++L  L L+ N L++LP+ IG  
Sbjct: 216 GNRLTFIPGLIGSLKQLTYLDVSKNNIDTVEEGISGCESLQDLLLSSNSLQQLPESIGLL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KKLTTLKIDENQLMYLPDSIGGLISIEELDCSFNEIEALPSSIGQLSNIRTFAADHNYLQ 335

Query: 322 SLPD--GLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSR 378
            LP   G    +T    + L  NK    P   G  Q   V  IN   N++  +P+  F++
Sbjct: 336 QLPPEIGFWKHVTV---LFLHSNKLETLPEEMGDMQKLKV--INLSDNRMKNLPFS-FTK 389

Query: 379 AKNLSKVNMKDN 390
            + L+ + + DN
Sbjct: 390 LQQLTAMWLSDN 401


>gi|329663814|ref|NP_001193082.1| protein LAP2 [Bos taurus]
 gi|296475860|tpg|DAA17975.1| TPA: erbb2 interacting protein isoform 1 [Bos taurus]
          Length = 1372

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 218/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTALPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDISKNN------------------------IEMVEEGI-SGCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  LV++E L  S N L+ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N LE++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  +   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDISKNN-IEMVEEGISGCENLQDLLLSSNSLQQLPETI 272


>gi|296475861|tpg|DAA17976.1| TPA: erbb2 interacting protein isoform 2 [Bos taurus]
          Length = 1302

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 218/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTALPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDISKNN------------------------IEMVEEGI-SGCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  LV++E L  S N L+ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N LE++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 117/222 (52%), Gaps = 25/222 (11%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            + NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I
Sbjct: 53  LDANQIEELPKQLFN-CQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENI 111

Query: 423 QN-----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           +N                       L+NL  L L++  L+ LP++ G L KL+ L+L EN
Sbjct: 112 KNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELREN 171

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L+ LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ 
Sbjct: 172 QLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQ 231

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L ++ N  +  +   ++ C NLQ + L +  L Q+P  I
Sbjct: 232 LTYLDISKNN-IEMVEEGISGCENLQDLLLSSNSLQQLPETI 272


>gi|301767858|ref|XP_002919342.1| PREDICTED: protein LAP2-like isoform 3 [Ailuropoda melanoleuca]
          Length = 1302

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 218/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ I  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMIEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  LV++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 117/222 (52%), Gaps = 25/222 (11%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            + NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I
Sbjct: 53  LDANQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENI 111

Query: 423 QN-----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           +N                       L+NL  L L++  L+ LP++ G L KL+ L+L EN
Sbjct: 112 KNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELREN 171

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L+ LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ 
Sbjct: 172 QLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQ 231

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L ++ N  +  I   ++ C NLQ + L +  L Q+P  I
Sbjct: 232 LTYLDVSKNN-IEMIEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|271966020|ref|YP_003340216.1| hypothetical protein [Streptosporangium roseum DSM 43021]
 gi|270509195|gb|ACZ87473.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 416

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 135/390 (34%), Positives = 214/390 (54%), Gaps = 14/390 (3%)

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
           T L L+   L+ +P+SL++L  L  LDL  N L+++P  +  L +L  L LR N ++TV 
Sbjct: 23  TTLDLSSLGLSEIPESLSDLTHLARLDLSENNLSDIPSSLRDLPALTELNLRANFLETVS 82

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
             +  L  L +L +R+N + + P  LG L  L  L+L+ N+L  LP  + N T L  L+L
Sbjct: 83  DTLGDLVTLEVLDLRENGLSQAPDSLGNLIALTELNLSENYLSALPDTLKNLTALTRLNL 142

Query: 270 QHNE-----------LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
                          L  +P+ LGNL +LT L LS NRL ++PE L     L   N+ G 
Sbjct: 143 SSLGMLAPEFFPTLGLTTLPEWLGNLTDLTELDLSSNRLTALPEVLGNLTDLTLLNLSGN 202

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
            L++LPD L  +L S+  ++L  N+ TA P       T +  ++   N++  +P  + + 
Sbjct: 203 RLTTLPDTL-GNLASLTKLSLYGNQLTALPET-LGNLTDLTELDLSSNRLTTLPDTLGNL 260

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
           A  L+ +++  N LT+LP  LG    LTEL+L +N+++ L E + NL +L   +  +NLL
Sbjct: 261 AS-LTMLSLYGNQLTALPETLGNLTNLTELDLSSNRLTTLPEVLGNLTDLTTFIAHDNLL 319

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
             +P  +G++  L  L L  N+L +LP+ +G L  L  L L  NQL +LP  +G+LT+L+
Sbjct: 320 TAVPEWLGDITDLTLLGLSGNRLTTLPDTLGNLTSLTMLSLYGNQLTALPETLGNLTDLT 379

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            L +  N L ++PE +G L +L  + L+ N
Sbjct: 380 DLELWNNRLTALPESLGDLPDLTWINLSGN 409



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 141/420 (33%), Positives = 219/420 (52%), Gaps = 37/420 (8%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE 156
           RC  +    LDLS   ++ +P S+  LTHL  L L  N L+ +PS +  +  LT L L  
Sbjct: 16  RCLRDGSTTLDLSSLGLSEIPESLSDLTHLARLDLSENNLSDIPSSLRDLPALTELNLRA 75

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N L ++ D+L +L  L VLDLR N L++ P  +  L +L  L L  N +  +   ++ L+
Sbjct: 76  NFLETVSDTLGDLVTLEVLDLRENGLSQAPDSLGNLIALTELNLSENYLSALPDTLKNLT 135

Query: 217 -----NLSMLSMRDNK------IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
                NLS L M   +      +  LP  LG L +L  LDL+ N L  LP+ +GN T L 
Sbjct: 136 ALTRLNLSSLGMLAPEFFPTLGLTTLPEWLGNLTDLTELDLSSNRLTALPEVLGNLTDLT 195

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
            L+L  N L  +PD LGNL +LT+L L  N+L ++PETL     L E ++    L++LPD
Sbjct: 196 LLNLSGNRLTTLPDTLGNLASLTKLSLYGNQLTALPETLGNLTDLTELDLSSNRLTTLPD 255

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
            L  +L S+  ++L  N+ TA P       T++  ++   N++  +P  +     +L+  
Sbjct: 256 TL-GNLASLTMLSLYGNQLTALPET-LGNLTNLTELDLSSNRLTTLPE-VLGNLTDLTTF 312

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
              DNLLT++P     W+G                   ++ +L +L LS N L  LP ++
Sbjct: 313 IAHDNLLTAVP----EWLG-------------------DITDLTLLGLSGNRLTTLPDTL 349

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
           GNL  L  L L  N+L +LP  +G L +L  L L +N+L +LP ++G L +L+++++  N
Sbjct: 350 GNLTSLTMLSLYGNQLTALPETLGNLTDLTDLELWNNRLTALPESLGDLPDLTWINLSGN 409



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 121/360 (33%), Positives = 192/360 (53%), Gaps = 19/360 (5%)

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L++L+ L + +N + ++P  L +L  L  L+L  N LE +   +G+   L  LDL+ N L
Sbjct: 42  LTHLARLDLSENNLSDIPSSLRDLPALTELNLRANFLETVSDTLGDLVTLEVLDLRENGL 101

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA-----------LSSL 323
              PD LGNLI LT L LS N L ++P+TL     L   N+               L++L
Sbjct: 102 SQAPDSLGNLIALTELNLSENYLSALPDTLKNLTALTRLNLSSLGMLAPEFFPTLGLTTL 161

Query: 324 PDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
           P+  L +LT +  + LS N+ TA P   G     T +  +N   N++  +P  + + A  
Sbjct: 162 PE-WLGNLTDLTELDLSSNRLTALPEVLG---NLTDLTLLNLSGNRLTTLPDTLGNLAS- 216

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           L+K+++  N LT+LP  LG    LTEL+L +N+++ L + + NL +L +L L  N L  L
Sbjct: 217 LTKLSLYGNQLTALPETLGNLTDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGNQLTAL 276

Query: 442 PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLS 501
           P ++GNL  L  LDL  N+L +LP  +G L +L   I   N L ++P  +G +T+L+ L 
Sbjct: 277 PETLGNLTNLTELDLSSNRLTTLPEVLGNLTDLTTFIAHDNLLTAVPEWLGDITDLTLLG 336

Query: 502 VGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +  N L ++P+ +G L +L  L L  N  L  +P  L   ++L  + L N  L+ +P  +
Sbjct: 337 LSGNRLTTLPDTLGNLTSLTMLSLYGNQ-LTALPETLGNLTDLTDLELWNNRLTALPESL 395



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/260 (40%), Positives = 147/260 (56%), Gaps = 4/260 (1%)

Query: 112 SITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQ 171
            +T LP  +  LT L EL L  N+L +LP  +G +T+LT L L+ N LT+LPD+L NL  
Sbjct: 157 GLTTLPEWLGNLTDLTELDLSSNRLTALPEVLGNLTDLTLLNLSGNRLTTLPDTLGNLAS 216

Query: 172 LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
           L  L L  N+L  LP  +  LT L  L L  NR+ T+   +  L++L+MLS+  N++  L
Sbjct: 217 LTKLSLYGNQLTALPETLGNLTDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGNQLTAL 276

Query: 232 PPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLR 291
           P  LG L NL  LDL+ N L  LP+ +GN T L T     N L  +P+ LG++ +LT L 
Sbjct: 277 PETLGNLTNLTELDLSSNRLTTLPEVLGNLTDLTTFIAHDNLLTAVPEWLGDITDLTLLG 336

Query: 292 LSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP-SG 350
           LS NRL ++P+TL     L   ++ G  L++LP+  L +LT + ++ L  N+ TA P S 
Sbjct: 337 LSGNRLTTLPDTLGNLTSLTMLSLYGNQLTALPET-LGNLTDLTDLELWNNRLTALPESL 395

Query: 351 GPTQFTSVYSINFEHNQIDK 370
           G      +  IN   N ID 
Sbjct: 396 G--DLPDLTWINLSGNPIDA 413



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 175/336 (52%), Gaps = 20/336 (5%)

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           + E+P  L +L +L  LDL+ N+L ++P  + +   L  L+L+ N L  + D LG+L+ L
Sbjct: 32  LSEIPESLSDLTHLARLDLSENNLSDIPSSLRDLPALTELNLRANFLETVSDTLGDLVTL 91

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLTSINNITLSRNKFT 345
             L L  N L   P++L   + L E N+    LS+LPD L  L++LT +N  +L      
Sbjct: 92  EVLDLRENGLSQAPDSLGNLIALTELNLSENYLSALPDTLKNLTALTRLNLSSLGMLAPE 151

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P+ G T                           +L+++++  N LT+LP  LG    L
Sbjct: 152 FFPTLGLTTLPE-----------------WLGNLTDLTELDLSSNRLTALPEVLGNLTDL 194

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
           T LNL  N+++ L + + NL +L  L L  N L  LP ++GNL  L  LDL  N+L +LP
Sbjct: 195 TLLNLSGNRLTTLPDTLGNLASLTKLSLYGNQLTALPETLGNLTDLTELDLSSNRLTTLP 254

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
           + +G L  L  L L  NQL +LP  +G+LTNL+ L +  N L ++PE +G L +L T   
Sbjct: 255 DTLGNLASLTMLSLYGNQLTALPETLGNLTNLTELDLSSNRLTTLPEVLGNLTDLTTFIA 314

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +DN  L  +P  L   ++L ++ L    L+ +P  +
Sbjct: 315 HDN-LLTAVPEWLGDITDLTLLGLSGNRLTTLPDTL 349



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 111/194 (57%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L  + +T LP ++  LT L EL L  N+L +LP  +G + +LT L L  N LT+LP++
Sbjct: 220 LSLYGNQLTALPETLGNLTDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGNQLTALPET 279

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L NL  L  LDL  N+L  LP V+  LT L       N +  V   +  +++L++L +  
Sbjct: 280 LGNLTNLTELDLSSNRLTTLPEVLGNLTDLTTFIAHDNLLTAVPEWLGDITDLTLLGLSG 339

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP  LG L +L  L L  N L  LP+ +GN T L  L+L +N L  +P+ LG+L 
Sbjct: 340 NRLTTLPDTLGNLTSLTMLSLYGNQLTALPETLGNLTDLTDLELWNNRLTALPESLGDLP 399

Query: 286 NLTRLRLSYNRLES 299
           +LT + LS N +++
Sbjct: 400 DLTWINLSGNPIDA 413



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 3/120 (2%)

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           G T L+L +  +S++ E + +L +L  L LS N L  +PSS+ +L  L  L+L  N LE+
Sbjct: 21  GSTTLDLSSLGLSEIPESLSDLTHLARLDLSENNLSDIPSSLRDLPALTELNLRANFLET 80

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           + + +G L  L+ L L+ N L   P ++G+L  L+ L++ EN L ++P+   TL+NL  L
Sbjct: 81  VSDTLGDLVTLEVLDLRENGLSQAPDSLGNLIALTELNLSENYLSALPD---TLKNLTAL 137


>gi|301767856|ref|XP_002919341.1| PREDICTED: protein LAP2-like isoform 2 [Ailuropoda melanoleuca]
          Length = 1372

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 218/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ I  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMIEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  LV++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 117/222 (52%), Gaps = 25/222 (11%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            + NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I
Sbjct: 53  LDANQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENI 111

Query: 423 QN-----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           +N                       L+NL  L L++  L+ LP++ G L KL+ L+L EN
Sbjct: 112 KNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELREN 171

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L+ LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ 
Sbjct: 172 QLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQ 231

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L ++ N  +  I   ++ C NLQ + L +  L Q+P  I
Sbjct: 232 LTYLDVSKNN-IEMIEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|301767854|ref|XP_002919340.1| PREDICTED: protein LAP2-like isoform 1 [Ailuropoda melanoleuca]
          Length = 1420

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 218/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ I  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMIEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  LV++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  I   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMIEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|359319033|ref|XP_003638977.1| PREDICTED: protein LAP2-like isoform 2 [Canis lupus familiaris]
          Length = 1302

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 218/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ I  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMIEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  LV++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 117/222 (52%), Gaps = 25/222 (11%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            + NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I
Sbjct: 53  LDANQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENI 111

Query: 423 QN-----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           +N                       L+NL  L L++  L+ LP++ G L KL+ L+L EN
Sbjct: 112 KNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELREN 171

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L+ LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ 
Sbjct: 172 QLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQ 231

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L ++ N  +  I   ++ C NLQ + L +  L Q+P  I
Sbjct: 232 LTYLDVSKNN-IEMIEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|443734386|gb|ELU18388.1| hypothetical protein CAPTEDRAFT_137734 [Capitella teleta]
          Length = 725

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 160/533 (30%), Positives = 257/533 (48%), Gaps = 78/533 (14%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS + +T LP  +  L  L +L L  NKL  +  QI  +T L  LGL  N++  +P +
Sbjct: 83  LDLSDNFLTELPVEISGLRRLTQLVLNNNKLTEIAPQIIDLTQLEVLGLNGNNIHEIPSA 142

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ------------ 213
           ++ LQ L+VL L  N+L+ L + V  +  L+ L +  N I  +   I+            
Sbjct: 143 ISKLQNLQVLALECNELDFLSVEVCHIHGLQKLQVSGNNITNLPYGIENLVCLQQLLLDD 202

Query: 214 -----------YLSNLSMLSMRDNKIRELP-PELGELKNLVTLDLAHNHLEELPKEIGNC 261
                      +L +L  L++  NKI+ L  PE+ +LKNL  L L +N + E+P EIG  
Sbjct: 203 NDLDFIPIQIFWLESLQELALSSNKIKALQGPEMAKLKNLKILGLNNNFIVEIPGEIGQM 262

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN---------- 311
            ML  L L+ N +  IP  +GNL NL  L L  N LES+PE LS C  +N          
Sbjct: 263 EMLEILGLEGNSISVIPVEIGNLANLEELYLGNNCLESLPEELSLCCAMNILNLAKNHLC 322

Query: 312 ------------------------------------EFNVEGCALSSLPDGLLSSLTSIN 335
                                                 N++G +LSSLP+ + ++L ++ 
Sbjct: 323 DVPVELKILTQMISLSLEDNDISELPSCVCALAELEVLNLDGNSLSSLPNDI-ANLENLQ 381

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
           ++TLSRN F  +P    TQ +++ ++   HN I ++P   F+  +NL    M  N++   
Sbjct: 382 HVTLSRNSFGTFPMP-LTQLSTIETLRMCHNSIAQLPEE-FTNLQNLKLFEMSHNVMQEF 439

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P+ L    GL  +NL  N++  ++ ++  L  L  L +SNN    LP  + ++ K++ L 
Sbjct: 440 PVQLCFIPGLETVNLANNKLESVAVEVNKLNKLTELDISNNNFDSLPLEVCSIPKIEKLI 499

Query: 456 LEEN---KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
           L +    +L+++P E    +  + L L  N +  LP  +    NL+ L++  N L S+P+
Sbjct: 500 LSQEEGLRLKNIPEEFARCRA-EHLHLDYNDIRELPAFLAKSNNLTSLTMSHNRLTSLPD 558

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGG 565
           EI   + L T ++NDN  +  +P       +L  + L + PL   PS++VVGG
Sbjct: 559 EICKSQKLRTFHVNDNQ-ITKLPEMFGKMHHLTDLRLHDNPLKNPPSDVVVGG 610



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 225/456 (49%), Gaps = 3/456 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L    +T + P +     L  L L  N++ S+P ++G + NL  L L  N L  +P  
Sbjct: 14  LSLIGKHLTSISPKIVDCETLNCLILASNEITSIPVELGNLINLEILILQSNKLHEIPSV 73

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L  LQ+L++LDL  N L ELP+ +  L  L  L L  N++  + P I  L+ L +L +  
Sbjct: 74  LGVLQKLQLLDLSDNFLTELPVEISGLRRLTQLVLNNNKLTEIAPQIIDLTQLEVLGLNG 133

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N I E+P  + +L+NL  L L  N L+ L  E+ +   L  L +  N + N+P  + NL+
Sbjct: 134 NNIHEIPSAISKLQNLQVLALECNELDFLSVEVCHIHGLQKLQVSGNNITNLPYGIENLV 193

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L +L L  N L+ +P  +     L E  +    + +L    ++ L ++  + L+ N   
Sbjct: 194 CLQQLLLDDNDLDFIPIQIFWLESLQELALSSNKIKALQGPEMAKLKNLKILGLNNNFIV 253

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P G   Q   +  +  E N I  IP  I + A NL ++ + +N L SLP +L     +
Sbjct: 254 EIP-GEIGQMEMLEILGLEGNSISVIPVEIGNLA-NLEELYLGNNCLESLPEELSLCCAM 311

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             LNL  N +  +  +++ L  +  L L +N + +LPS +  L +L+ L+L+ N L SLP
Sbjct: 312 NILNLAKNHLCDVPVELKILTQMISLSLEDNDISELPSCVCALAELEVLNLDGNSLSSLP 371

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
           N+I  L+ LQ + L  N   + P  +  L+ +  L +  N++  +PEE   L+NL    +
Sbjct: 372 NDIANLENLQHVTLSRNSFGTFPMPLTQLSTIETLRMCHNSIAQLPEEFTNLQNLKLFEM 431

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           + N  +   P +L     L+ ++L N  L  +  E+
Sbjct: 432 SHNV-MQEFPVQLCFIPGLETVNLANNKLESVAVEV 466



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/326 (34%), Positives = 170/326 (52%), Gaps = 5/326 (1%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           K+ V L L   HL  +  +I +C  L  L L  NE+ +IP  LGNLINL  L L  N+L 
Sbjct: 9   KDKVCLSLIGKHLTSISPKIVDCETLNCLILASNEITSIPVELGNLINLEILILQSNKLH 68

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
            +P  L     L   ++    L+ LP   +S L  +  + L+ NK T   +      T +
Sbjct: 69  EIPSVLGVLQKLQLLDLSDNFLTELPVE-ISGLRRLTQLVLNNNKLTEI-APQIIDLTQL 126

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
             +    N I +IP  I S+ +NL  + ++ N L  L +++    GL +L +  N I+ L
Sbjct: 127 EVLGLNGNNIHEIPSAI-SKLQNLQVLALECNELDFLSVEVCHIHGLQKLQVSGNNITNL 185

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN-EIGFLKELQRL 477
              I+NLV L+ L+L +N L  +P  I  L  L+ L L  NK+++L   E+  LK L+ L
Sbjct: 186 PYGIENLVCLQQLLLDDNDLDFIPIQIFWLESLQELALSSNKIKALQGPEMAKLKNLKIL 245

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L +N +V +P  IG +  L  L +  N++  IP EIG L NL  LYL +N CL ++P E
Sbjct: 246 GLNNNFIVEIPGEIGQMEMLEILGLEGNSISVIPVEIGNLANLEELYLGNN-CLESLPEE 304

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVV 563
           L+LC  + I++L    L  +P E+ +
Sbjct: 305 LSLCCAMNILNLAKNHLCDVPVELKI 330



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 146/301 (48%), Gaps = 32/301 (10%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           +++L L  + I+ LP  V  L  LE L L GN L+SLP+ I  + NL  + L+ NS  + 
Sbjct: 334 MISLSLEDNDISELPSCVCALAELEVLNLDGNSLSSLPNDIANLENLQHVTLSRNSFGTF 393

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P  L  L  +  L + HN + +LP                        +   L NL +  
Sbjct: 394 PMPLTQLSTIETLRMCHNSIAQLP-----------------------EEFTNLQNLKLFE 430

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           M  N ++E P +L  +  L T++LA+N LE +  E+     L  LD+ +N   ++P  + 
Sbjct: 431 MSHNVMQEFPVQLCFIPGLETVNLANNKLESVAVEVNKLNKLTELDISNNNFDSLPLEVC 490

Query: 283 NLINLTRLRLSYN---RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
           ++  + +L LS     RL+++PE  ++C      +++   +  LP   L+   ++ ++T+
Sbjct: 491 SIPKIEKLILSQEEGLRLKNIPEEFARC-RAEHLHLDYNDIRELP-AFLAKSNNLTSLTM 548

Query: 340 SRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           S N+ T+ P     +Q    + +N   NQI K+P  +F +  +L+ + + DN L + P D
Sbjct: 549 SHNRLTSLPDEICKSQKLRTFHVN--DNQITKLPE-MFGKMHHLTDLRLHDNPLKNPPSD 605

Query: 399 L 399
           +
Sbjct: 606 V 606



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 102/187 (54%), Gaps = 1/187 (0%)

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           IF   K+   +++    LTS+   +     L  L L +N+I+ +  ++ NL+NLE+L+L 
Sbjct: 4   IFRTNKDKVCLSLIGKHLTSISPKIVDCETLNCLILASNEITSIPVELGNLINLEILILQ 63

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
           +N L ++PS +G L+KL+ LDL +N L  LP EI  L+ L +L+L +N+L  +   I  L
Sbjct: 64  SNKLHEIPSVLGVLQKLQLLDLSDNFLTELPVEISGLRRLTQLVLNNNKLTEIAPQIIDL 123

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
           T L  L +  NN+  IP  I  L+NL  L L  N  L+ +  E+     LQ + +    +
Sbjct: 124 TQLEVLGLNGNNIHEIPSAISKLQNLQVLALECNE-LDFLSVEVCHIHGLQKLQVSGNNI 182

Query: 555 SQIPSEI 561
           + +P  I
Sbjct: 183 TNLPYGI 189



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 25/226 (11%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN+ ++ LS++S    P  + +L+ +E L +  N +A LP +   + NL    ++ N + 
Sbjct: 378 ENLQHVTLSRNSFGTFPMPLTQLSTIETLRMCHNSIAQLPEEFTNLQNLKLFEMSHNVMQ 437

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH------PDIQY 214
             P  L  +  L  ++L +NKL  + + V KL  L  L +  N   ++       P I+ 
Sbjct: 438 EFPVQLCFIPGLETVNLANNKLESVAVEVNKLNKLTELDISNNNFDSLPLEVCSIPKIEK 497

Query: 215 L-------------------SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           L                        L +  N IRELP  L +  NL +L ++HN L  LP
Sbjct: 498 LILSQEEGLRLKNIPEEFARCRAEHLHLDYNDIRELPAFLAKSNNLTSLTMSHNRLTSLP 557

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
            EI     L T  +  N++  +P+M G + +LT LRL  N L++ P
Sbjct: 558 DEICKSQKLRTFHVNDNQITKLPEMFGKMHHLTDLRLHDNPLKNPP 603



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 4/181 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS---LTSL 162
           ++L+ + +  +   V KL  L EL +  N   SLP ++  +  +  L L++     L ++
Sbjct: 452 VNLANNKLESVAVEVNKLNKLTELDISNNNFDSLPLEVCSIPKIEKLILSQEEGLRLKNI 511

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+  A  +    L L +N + ELP  + K  +L  L +  NR+ ++  +I     L    
Sbjct: 512 PEEFARCRA-EHLHLDYNDIRELPAFLAKSNNLTSLTMSHNRLTSLPDEICKSQKLRTFH 570

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           + DN+I +LP   G++ +L  L L  N L+  P ++    +L  +D   ++ +   DML 
Sbjct: 571 VNDNQITKLPEMFGKMHHLTDLRLHDNPLKNPPSDVVVGGVLQPIDRFISKHIAHEDMLL 630

Query: 283 N 283
           N
Sbjct: 631 N 631


>gi|440908498|gb|ELR58508.1| Protein LAP2 [Bos grunniens mutus]
          Length = 1412

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 218/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTALPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDISKNN------------------------IEMVEEGI-SGCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  LV++E L  S N L+ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N LE++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  +   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDISKNN-IEMVEEGISGCENLQDLLLSSNSLQQLPETI 272


>gi|344270739|ref|XP_003407201.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Loxodonta africana]
          Length = 865

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 141/450 (31%), Positives = 231/450 (51%), Gaps = 29/450 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++S + I+H+P  + +L ++ +L+   N + S P  +  + NL  L LA+N L  +P++
Sbjct: 223 LNVSHNQISHIPKEISQLGNIRQLFFNNNYIESFPPGLENLGNLEILNLAKNKLKHIPET 282

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + NL+ LR+L L +N+L   P  +  L  L  L L  N I+++  +I+ L NL  LS+  
Sbjct: 283 IYNLKNLRILSLEYNQLTIFPKALCFLPKLISLNLNGNLIRSLPKEIEELKNLESLSLDH 342

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN-----------------------CT 262
           N +  L  E+ +L  +  L LA+N LE +  +IGN                       C 
Sbjct: 343 NNLTFLAVEIFQLLKMKELHLANNKLEVISYKIGNFKELRILTLDKNLLKEVSEKISHCI 402

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           ML  L L  NELV +P  +  L NL  L ++ N +  + E +S   +L      G  ++ 
Sbjct: 403 MLECLSLNDNELVELPKNIHKLKNLRTLHVNRNSILKITEDISHLNNLCSLEFSGNVITD 462

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P   + +   +  + LS NK   +P  G     S+Y + F  N I +IP  I S +K L
Sbjct: 463 VPIE-IKNCRKMTKVNLSYNKIMYFPV-GLCALDSLYYLIFNGNYISEIPVDI-SFSKQL 519

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             +   +N L      L + + L  LNLG NQISK+   I N+V+L VL+L +N  +  P
Sbjct: 520 LHLEFNENKLHLFSEHLCSLINLEYLNLGKNQISKIPPFISNMVSLHVLILCHNKFETFP 579

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
           + +  L  L+ LDL EN+++++P++I  LK +Q+L   SNQ V  P  + HL +L  L++
Sbjct: 580 TELCALENLQVLDLSENQMQTIPSDICNLKGIQKLNFSSNQFVCFPIELCHLQSLEELNI 639

Query: 503 GENN---LQSIPEEIGTLENLHTLYLNDNT 529
            + N   L  +PEE+  +  L  L +++N 
Sbjct: 640 SQINGRKLTRLPEELFNMIQLKELDISNNA 669



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 219/428 (51%), Gaps = 10/428 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L L  +++T L   + +L  ++EL+L  NKL  +  +IG    L  L L +N L 
Sbjct: 333 KNLESLSLDHNNLTFLAVEIFQLLKMKELHLANNKLEVISYKIGNFKELRILTLDKNLLK 392

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            + + +++   L  L L  N+L ELP  ++KL +L+ L++  N I  +  DI +L+NL  
Sbjct: 393 EVSEKISHCIMLECLSLNDNELVELPKNIHKLKNLRTLHVNRNSILKITEDISHLNNLCS 452

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTM--LVTLDLQHNELVNIP 278
           L    N I ++P E+   + +  ++L++N +   P  +G C +  L  L    N +  IP
Sbjct: 453 LEFSGNVITDVPIEIKNCRKMTKVNLSYNKIMYFP--VGLCALDSLYYLIFNGNYISEIP 510

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +     L  L  + N+L    E L   ++L   N+    +S +P   +S++ S++ + 
Sbjct: 511 VDISFSKQLLHLEFNENKLHLFSEHLCSLINLEYLNLGKNQISKIP-PFISNMVSLHVLI 569

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           L  NKF  +P+       ++  ++   NQ+  IP  I    K + K+N   N     P++
Sbjct: 570 LCHNKFETFPTE-LCALENLQVLDLSENQMQTIPSDI-CNLKGIQKLNFSSNQFVCFPIE 627

Query: 399 LGTWVGLTELNLGT---NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           L     L ELN+      ++++L E++ N++ L+ L +SNN ++++P ++G  R L  L+
Sbjct: 628 LCHLQSLEELNISQINGRKLTRLPEELFNMIQLKELDISNNAIREIPRNVGESRCLVSLN 687

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
              N++  LP    FL +LQ+L L  N L +LP  I +L +L  ++  +N L   P EI 
Sbjct: 688 ACNNQISCLPPSFLFLNDLQQLNLSGNNLTALPSGIYNLFSLKEINFDDNPLLRPPMEIC 747

Query: 516 TLENLHTL 523
             + L+T+
Sbjct: 748 KGKQLYTI 755


>gi|421129287|ref|ZP_15589488.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359483|gb|EKP06581.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 448

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 150/402 (37%), Positives = 222/402 (55%), Gaps = 30/402 (7%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L G+KLA+L  +IG + NL  L L  N LT+LP+ +  LQ L+VLDL  N+L  LP  
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + KL +L++L L FNR+  +  ++  L NL +L++  NK+  LP ++G+L+NL  L+L  
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNL 172

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L  LP++IG    L  L+ Q N+L   P  +G L  L  L L +NRL ++ E + +  
Sbjct: 173 NKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQ 232

Query: 309 HLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
           +L   ++    L++LP   G L  L  +N                      +Y I     
Sbjct: 233 NLQILDLISNPLTTLPKEIGQLQKLQELN----------------------LYGI----- 265

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
           Q+  +P GI  + +NL  +N+    LT LP ++G    L +L L  NQ++ L E+I  L 
Sbjct: 266 QLKTLPQGII-QLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLK 324

Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
            L+ L L NN L+ LP  I  L+KL+ L LE N++ + P EIG LK LQ L L  NQL +
Sbjct: 325 KLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLKNLQELNLGFNQLTT 384

Query: 487 LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           LP+ IG L NL  L++  N L ++P+E+G L+ L  L L +N
Sbjct: 385 LPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNN 426



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 140/404 (34%), Positives = 215/404 (53%), Gaps = 26/404 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS S +  L   + KL +L++LYL  N+L +LP++IG + NL  L L  N LT LP  
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+VL+L  N+L  LP  V +L +L++L L  N++  +   I  L NL +L++  
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNL 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+  LP ++G+L+NL  L+   N L   PKEIG    L  L+L  N L  + + +  L 
Sbjct: 173 NKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N L ++P+ + +   L E N+ G  L +LP G++                 
Sbjct: 233 NLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGII----------------- 275

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                   Q  ++  +N  +  +  +P  I   +K L K+ +  N LT+LP ++G    L
Sbjct: 276 --------QLQNLRGLNLNYTHLTILPKEIGQLSK-LQKLYLYGNQLTTLPEEIGQLKKL 326

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            EL LG N +  L ++I+ L  L+ L L  N +   P  IG L+ L+ L+L  N+L +LP
Sbjct: 327 QELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLKNLQELNLGFNQLTTLP 386

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            EIG L+ LQ L L+ NQL +LP+ +G L  L  L++  N + S
Sbjct: 387 QEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIAS 430



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 133/368 (36%), Positives = 198/368 (53%), Gaps = 8/368 (2%)

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           +IL L  +++ T+  +I  L NL  L +  N++  LP E+G+L+NL  LDL  N L  LP
Sbjct: 51  RILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILP 110

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
           KEIG    L  L+L  N L  +PD +G L NL  L L  N+L  +PE + +  +L   N+
Sbjct: 111 KEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNL 170

Query: 316 EGCALSSLPD--GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
               L+ LP+  G L +L  +N+     N+ T +P     Q   +  +N   N++  +  
Sbjct: 171 NLNKLTILPEKIGQLQNLQILNS---QGNQLTTFPKE-IGQLQKLQELNLGFNRLTTLRE 226

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
            +  + +NL  +++  N LT+LP ++G    L ELNL   Q+  L + I  L NL  L L
Sbjct: 227 EVV-QLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNL 285

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           +   L  LP  IG L KL+ L L  N+L +LP EIG LK+LQ L L +N L +LP+ I  
Sbjct: 286 NYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQ 345

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L  L  L +  N + + P+EIG L+NL  L L  N  L  +P E+    NLQ ++L+   
Sbjct: 346 LQKLQTLYLEGNQITTFPKEIGQLKNLQELNLGFNQ-LTTLPQEIGQLQNLQELNLEFNQ 404

Query: 554 LSQIPSEI 561
           L+ +P E+
Sbjct: 405 LATLPKEV 412



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 127/359 (35%), Positives = 183/359 (50%), Gaps = 33/359 (9%)

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           R L   L   K+   L+L+ + L  L KEIG    L  L L +N+L  +P+ +G L NL 
Sbjct: 38  RNLTEALQNPKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQ 97

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTA 346
            L L  N L  +P+ + K  +L   N+    L+ LPD  G L +L  +N   L  NK T 
Sbjct: 98  VLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLN---LDLNKLTI 154

Query: 347 YPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            P   G  Q   V ++N     I  +P  I  + +NL  +N + N LT+ P ++G    L
Sbjct: 155 LPEKIGQLQNLQVLNLNLNKLTI--LPEKI-GQLQNLQILNSQGNQLTTFPKEIGQLQKL 211

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            ELNLG N+++ L E++  L NL++L L +N L  LP  IG L+KL+ L+L   +L++LP
Sbjct: 212 QELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLP 271

Query: 466 N-----------------------EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
                                   EIG L +LQ+L L  NQL +LP  IG L  L  L +
Sbjct: 272 QGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYL 331

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           G N L+++P+EI  L+ L TLYL  N  +   P E+    NLQ ++L    L+ +P EI
Sbjct: 332 GNNPLRTLPKEIEQLQKLQTLYLEGNQ-ITTFPKEIGQLKNLQELNLGFNQLTTLPQEI 389


>gi|281341775|gb|EFB17359.1| hypothetical protein PANDA_007969 [Ailuropoda melanoleuca]
          Length = 1412

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 218/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ I  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMIEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  LV++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 117/222 (52%), Gaps = 25/222 (11%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            + NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I
Sbjct: 53  LDANQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENI 111

Query: 423 QN-----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           +N                       L+NL  L L++  L+ LP++ G L KL+ L+L EN
Sbjct: 112 KNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELREN 171

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L+ LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ 
Sbjct: 172 QLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQ 231

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L ++ N  +  I   ++ C NLQ + L +  L Q+P  I
Sbjct: 232 LTYLDVSKNN-IEMIEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|255080390|ref|XP_002503775.1| predicted protein [Micromonas sp. RCC299]
 gi|226519042|gb|ACO65033.1| predicted protein [Micromonas sp. RCC299]
          Length = 406

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 126/331 (38%), Positives = 184/331 (55%), Gaps = 8/331 (2%)

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           +P E+G+L +LV L L HN L  LP EIG    L  L L  N+L ++P  +G L++L  L
Sbjct: 42  VPAEVGQLPSLVKLSLRHNQLTSLPAEIGQLPSLTRLWLAGNQLTSLPAEIGQLMSLEGL 101

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+ N+L SVP  + +   L   N+ G  L+S+P+ +   LTS+  + LS N+ T+    
Sbjct: 102 FLNGNQLTSVPAEIWQLTSLRALNLYGNQLTSVPEEI-GQLTSLRRLFLSGNQLTSI--- 157

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                +++  +    NQ   +P  I  +  +L  + +  N LTS+P ++G    L  LNL
Sbjct: 158 --GLLSALRGLGVSGNQRTSVPAEI-GQLTSLEVLELHYNQLTSVPAEIGQLASLKWLNL 214

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             NQ++ L   I  L +L  L L +N L  LP+ IG L  L+ L L  N+L SLP EIG 
Sbjct: 215 HGNQLTSLPAGIGQLTSLTYLFLDDNRLTSLPAEIGQLTSLERLYLRHNQLTSLPAEIGQ 274

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+ L L+ NQL SLP  IG LT+L+YL + EN L S+P EIG L +L  L LN N  
Sbjct: 275 LASLEWLYLEGNQLTSLPAGIGQLTSLTYLYLNENQLTSLPAEIGQLTSLKALGLNYNQ- 333

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++P E+   + L+ + L    L+ +P+EI
Sbjct: 334 LTSVPAEIGQLAALRELGLFENQLTSVPAEI 364



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 135/355 (38%), Positives = 189/355 (53%), Gaps = 8/355 (2%)

Query: 175 LDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           LDL    L   +P  V +L SL  L LR N++ ++  +I  L +L+ L +  N++  LP 
Sbjct: 31  LDLEDVGLTGAVPAEVGQLPSLVKLSLRHNQLTSLPAEIGQLPSLTRLWLAGNQLTSLPA 90

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+G+L +L  L L  N L  +P EI   T L  L+L  N+L ++P+ +G L +L RL LS
Sbjct: 91  EIGQLMSLEGLFLNGNQLTSVPAEIWQLTSLRALNLYGNQLTSVPEEIGQLTSLRRLFLS 150

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
            N+L S+         L    V G   +S+P  +   LTS+  + L  N+ T+ P+    
Sbjct: 151 GNQLTSI----GLLSALRGLGVSGNQRTSVPAEI-GQLTSLEVLELHYNQLTSVPAE-IG 204

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q  S+  +N   NQ+  +P GI  +  +L+ + + DN LTSLP ++G    L  L L  N
Sbjct: 205 QLASLKWLNLHGNQLTSLPAGI-GQLTSLTYLFLDDNRLTSLPAEIGQLTSLERLYLRHN 263

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           Q++ L  +I  L +LE L L  N L  LP+ IG L  L  L L EN+L SLP EIG L  
Sbjct: 264 QLTSLPAEIGQLASLEWLYLEGNQLTSLPAGIGQLTSLTYLYLNENQLTSLPAEIGQLTS 323

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L+ L L  NQL S+P  IG L  L  L + EN L S+P EIG L  L  L L  N
Sbjct: 324 LKALGLNYNQLTSVPAEIGQLAALRELGLFENQLTSVPAEIGQLTLLEGLELRHN 378



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 133/378 (35%), Positives = 193/378 (51%), Gaps = 30/378 (7%)

Query: 137 ASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLK 196
            ++P+++G + +L  L L  N LTSLP  +  L  L  L L  N+L  LP  + +L SL+
Sbjct: 40  GAVPAEVGQLPSLVKLSLRHNQLTSLPAEIGQLPSLTRLWLAGNQLTSLPAEIGQLMSLE 99

Query: 197 ILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPK 256
            L+L  N++ +V  +I  L++L  L++  N++  +P E+G+L +L  L L+ N L     
Sbjct: 100 GLFLNGNQLTSVPAEIWQLTSLRALNLYGNQLTSVPEEIGQLTSLRRLFLSGNQL----T 155

Query: 257 EIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE 316
            IG  + L  L +  N+  ++P  +G L +L  L L YN+L SVP  + +   L   N+ 
Sbjct: 156 SIGLLSALRGLGVSGNQRTSVPAEIGQLTSLEVLELHYNQLTSVPAEIGQLASLKWLNLH 215

Query: 317 GCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIF 376
           G  L+SLP G+   LTS+  + L  N+ T+ P+    Q TS+  +   HNQ         
Sbjct: 216 GNQLTSLPAGI-GQLTSLTYLFLDDNRLTSLPAE-IGQLTSLERLYLRHNQ--------- 264

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
                          LTSLP ++G    L  L L  NQ++ L   I  L +L  L L+ N
Sbjct: 265 ---------------LTSLPAEIGQLASLEWLYLEGNQLTSLPAGIGQLTSLTYLYLNEN 309

Query: 437 LLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
            L  LP+ IG L  LK L L  N+L S+P EIG L  L+ L L  NQL S+P  IG LT 
Sbjct: 310 QLTSLPAEIGQLTSLKALGLNYNQLTSVPAEIGQLAALRELGLFENQLTSVPAEIGQLTL 369

Query: 497 LSYLSVGENNLQSIPEEI 514
           L  L +  N L S P  I
Sbjct: 370 LEGLELRHNRLTSEPAAI 387



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/367 (33%), Positives = 192/367 (52%), Gaps = 30/367 (8%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           +++ L L  + +T LP  + +L  L  L+L GN+L SLP++IG + +L  L L  N LTS
Sbjct: 51  SLVKLSLRHNQLTSLPAEIGQLPSLTRLWLAGNQLTSLPAEIGQLMSLEGLFLNGNQLTS 110

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  +  L  LR L+L  N+L  +P  + +LTSL+ L+L  N++ +    I  LS L  L
Sbjct: 111 VPAEIWQLTSLRALNLYGNQLTSVPEEIGQLTSLRRLFLSGNQLTS----IGLLSALRGL 166

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N+   +P E+G+L +L  L+L +N L  +P EIG    L  L+L  N+L ++P  +
Sbjct: 167 GVSGNQRTSVPAEIGQLTSLEVLELHYNQLTSVPAEIGQLASLKWLNLHGNQLTSLPAGI 226

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L +LT L L  NRL S+P  + +                        LTS+  + L  
Sbjct: 227 GQLTSLTYLFLDDNRLTSLPAEIGQ------------------------LTSLERLYLRH 262

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T+ P+    Q  S+  +  E NQ+  +P GI  +  +L+ + + +N LTSLP ++G 
Sbjct: 263 NQLTSLPA-EIGQLASLEWLYLEGNQLTSLPAGI-GQLTSLTYLYLNENQLTSLPAEIGQ 320

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L L  NQ++ +  +I  L  L  L L  N L  +P+ IG L  L+ L+L  N+L
Sbjct: 321 LTSLKALGLNYNQLTSVPAEIGQLAALRELGLFENQLTSVPAEIGQLTLLEGLELRHNRL 380

Query: 462 ESLPNEI 468
            S P  I
Sbjct: 381 TSEPAAI 387



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 134/402 (33%), Positives = 210/402 (52%), Gaps = 31/402 (7%)

Query: 94  EFLRCKEENILNLDLSKSSIT-HLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCL 152
           E +  +   ++ LDL    +T  +P  V +L  L +L L  N+L SLP++IG + +LT L
Sbjct: 19  EGVTIENGRVVELDLEDVGLTGAVPAEVGQLPSLVKLSLRHNQLTSLPAEIGQLPSLTRL 78

Query: 153 GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
            LA N LTSLP  +  L  L  L L  N+L  +P  +++LTSL+ L L  N++ +V  +I
Sbjct: 79  WLAGNQLTSLPAEIGQLMSLEGLFLNGNQLTSVPAEIWQLTSLRALNLYGNQLTSVPEEI 138

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L++L  L +  N++      +G L  L  L ++ N    +P EIG  T L  L+L +N
Sbjct: 139 GQLTSLRRLFLSGNQLT----SIGLLSALRGLGVSGNQRTSVPAEIGQLTSLEVLELHYN 194

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
           +L ++P  +G L +L  L L  N+L S+P  + +   L    ++   L+SLP   +  LT
Sbjct: 195 QLTSVPAEIGQLASLKWLNLHGNQLTSLPAGIGQLTSLTYLFLDDNRLTSLPAE-IGQLT 253

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
           S+  + L  N+ T+ P+    Q  S+  +  E NQ+  +P GI  +  +L+ + + +N L
Sbjct: 254 SLERLYLRHNQLTSLPA-EIGQLASLEWLYLEGNQLTSLPAGI-GQLTSLTYLYLNENQL 311

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
           TSLP ++G                        L +L+ L L+ N L  +P+ IG L  L+
Sbjct: 312 TSLPAEIG-----------------------QLTSLKALGLNYNQLTSVPAEIGQLAALR 348

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
            L L EN+L S+P EIG L  L+ L L+ N+L S P AI  L
Sbjct: 349 ELGLFENQLTSVPAEIGQLTLLEGLELRHNRLTSEPAAIREL 390



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 80/134 (59%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L  + +T LP  + +L  LE LYL GN+L SLP+ IG +T+LT L L EN LTSLP  
Sbjct: 258 LYLRHNQLTSLPAEIGQLASLEWLYLEGNQLTSLPAGIGQLTSLTYLYLNENQLTSLPAE 317

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L+ L L +N+L  +P  + +L +L+ L L  N++ +V  +I  L+ L  L +R 
Sbjct: 318 IGQLTSLKALGLNYNQLTSVPAEIGQLAALRELGLFENQLTSVPAEIGQLTLLEGLELRH 377

Query: 226 NKIRELPPELGELK 239
           N++   P  + EL+
Sbjct: 378 NRLTSEPAAIRELR 391



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 67/109 (61%), Gaps = 2/109 (1%)

Query: 454 LDLEENKLE-SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
           LDLE+  L  ++P E+G L  L +L L+ NQL SLP  IG L +L+ L +  N L S+P 
Sbjct: 31  LDLEDVGLTGAVPAEVGQLPSLVKLSLRHNQLTSLPAEIGQLPSLTRLWLAGNQLTSLPA 90

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           EIG L +L  L+LN N  L ++P E+   ++L+ ++L    L+ +P EI
Sbjct: 91  EIGQLMSLEGLFLNGNQ-LTSVPAEIWQLTSLRALNLYGNQLTSVPEEI 138


>gi|390343687|ref|XP_003725942.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1-like [Strongylocentrotus purpuratus]
          Length = 744

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 153/531 (28%), Positives = 250/531 (47%), Gaps = 72/531 (13%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +LDLS + I  +P  +  L+ L+++ L  N+L +LP++  ++  L C+ L++N LTSLP 
Sbjct: 191 HLDLSGNEIQEIPTEIRMLSSLQQIDLSDNQLTALPNEFCHLRKLICVFLSQNKLTSLPA 250

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
           ++++L+ ++VL++ +N L  LP  V  L  L  L L  N ++T+  DI+YL NL  L + 
Sbjct: 251 NISHLRNIQVLEMNNNMLKWLPKQVCLLDQLVKLSLCGNYLQTLPADIEYLFNLQELHLE 310

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
            N    LP ++  L  L  L L+ NH++E+  EI   T L  LDL  NEL  +P  +  L
Sbjct: 311 QNSFFYLPIQIYWLPELEELYLSQNHIQEISSEIQKLTKLRVLDLGTNELNTVPQEICLL 370

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL----------------- 327
           +NL  L L  NRL S+P+ +++   L EF V    L+ +PD L                 
Sbjct: 371 LNLVFLGLGSNRLTSLPDNMNRLYKLVEFLVGNNELTEIPDDLSLLSQLQVLDLSNNHMS 430

Query: 328 -----LSSLTSINNITLSRNKFTAYPSGG------------------------------- 351
                ++SL  +N ++L  N+ + +P G                                
Sbjct: 431 ELPVEIASLKQVNVLSLQGNQISTFPPGACLLSKCEELSFDRNLLSRLPSEVKHMKSLQS 490

Query: 352 -----------PTQFTSVYSINF---EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
                      P +   V ++ F     N I  +P  +  R +NL K  + +N  T++  
Sbjct: 491 VTITNNRLTQFPKELCEVRTLQFLDLSQNLISSVPASV-RRLQNLEKFILNENTFTAITP 549

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++ T   L  L++  NQI+++ E++     LE L LSNN     P  I  + +L+ L   
Sbjct: 550 EMCTLKNLVSLSMSDNQITEICEEVSMYQRLEALDLSNNQFPVFPPEIWTILRLRILHFI 609

Query: 458 EN---KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           +    K   L   I   ++L+ + +Q N L  +P  I  L+ L      +N L  IPE  
Sbjct: 610 QEKGVKASFLQPAIYNCQDLEEIYVQHNCLTMIPNTIRSLSKLRIFCASDNCLMDIPEVF 669

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGG 565
             L+NL  L L  N  + ++P    + S L+++ LD  PL+  PSE+  GG
Sbjct: 670 CELKNLEVLKLERNQ-IKSLPINFEMLSELRVLRLDTNPLAHPPSEVCEGG 719



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 143/550 (26%), Positives = 253/550 (46%), Gaps = 37/550 (6%)

Query: 51  EKDNKKCGVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSK 110
           + D + CG D         PE ++  P     EP+  D++     +         LDLS+
Sbjct: 78  DSDMQTCGPD-------DIPEVSQEIPQEDNVEPVPVDVST---LVYRDTHGRFCLDLSE 127

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
             I+ +PP   +L  L  L +    L  +PS + Y+  L  L L E SLT  P S+  L 
Sbjct: 128 EDISVIPPDTFELDFLNYLSVTCLPLYEIPSGLSYLQQLDSLTLRECSLTEFPGSICALP 187

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLK-----------------------ILYLRFNRIKT 207
            L  LDL  N++ E+P  +  L+SL+                        ++L  N++ +
Sbjct: 188 LLEHLDLSGNEIQEIPTEIRMLSSLQQIDLSDNQLTALPNEFCHLRKLICVFLSQNKLTS 247

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
           +  +I +L N+ +L M +N ++ LP ++  L  LV L L  N+L+ LP +I     L  L
Sbjct: 248 LPANISHLRNIQVLEMNNNMLKWLPKQVCLLDQLVKLSLCGNYLQTLPADIEYLFNLQEL 307

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
            L+ N    +P  +  L  L  L LS N ++ +   + K   L   ++    L+++P  +
Sbjct: 308 HLEQNSFFYLPIQIYWLPELEELYLSQNHIQEISSEIQKLTKLRVLDLGTNELNTVPQEI 367

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
              L  +     S N+ T+ P     +   +      +N++ +IP  + S    L  +++
Sbjct: 368 CLLLNLVFLGLGS-NRLTSLPDNM-NRLYKLVEFLVGNNELTEIPDDL-SLLSQLQVLDL 424

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
            +N ++ LP+++ +   +  L+L  NQIS        L   E L    NLL +LPS + +
Sbjct: 425 SNNHMSELPVEIASLKQVNVLSLQGNQISTFPPGACLLSKCEELSFDRNLLSRLPSEVKH 484

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           ++ L+ + +  N+L   P E+  ++ LQ L L  N + S+P ++  L NL    + EN  
Sbjct: 485 MKSLQSVTITNNRLTQFPKELCEVRTLQFLDLSQNLISSVPASVRRLQNLEKFILNENTF 544

Query: 508 QSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPS 567
            +I  E+ TL+NL +L ++DN  +  I  E+++   L+ + L N      P EI      
Sbjct: 545 TAITPEMCTLKNLVSLSMSDNQ-ITEICEEVSMYQRLEALDLSNNQFPVFPPEIWTILRL 603

Query: 568 LIIRYLKMQG 577
            I+ +++ +G
Sbjct: 604 RILHFIQEKG 613


>gi|418694701|ref|ZP_13255735.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|409957466|gb|EKO16373.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
          Length = 425

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 133/381 (34%), Positives = 210/381 (55%), Gaps = 26/381 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS+  +  LP  + +L +L+ LYL+ N+L  LP +I  + NL  L L  N LT+LP  
Sbjct: 53  LELSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VLDL  N+L  LP  + +L +L++LYL  NR+ T+  DI+ L NL  L + +
Sbjct: 113 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+ +LKNL +L L+ N     PKEIG    L  L L +N++  +P+ +  L 
Sbjct: 173 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLK 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LS N+L ++P+ + +                        L ++  + LS N+F 
Sbjct: 233 KLQYLYLSDNQLITLPKEIEQ------------------------LKNLQTLDLSYNQFK 268

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++ +++  +NQ+  +P  I  + KNL  + + +N LT LP ++G    L
Sbjct: 269 IIPK-EIGQLENLQTLDLRNNQLKTLPKEI-EQLKNLQTLFLSNNQLTILPQEIGKLKNL 326

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L+L  NQ++ L  +I+ L NL+VL   +N +  L   IG L+ LK L L  N+L +LP
Sbjct: 327 LWLSLVYNQLTTLPNEIEQLKNLQVLNFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLP 386

Query: 466 NEIGFLKELQRLILQSNQLVS 486
            EIG LK L++L L ++QL S
Sbjct: 387 KEIGQLKNLKKLYLNNHQLSS 407



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 151/438 (34%), Positives = 225/438 (51%), Gaps = 43/438 (9%)

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE----NSLTSLPDSLANLQQLRVLDLR 178
           L HL+++ +Y            ++ NL+C   AE     +   L  +L N   +RVL+L 
Sbjct: 7   LIHLQKITIY----------FLFLMNLSCEIQAEEVEPGTYKDLTKALQNPLDVRVLELS 56

Query: 179 HNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGEL 238
             +L  LP+ + +L +L+ LYL +N++  +  +I+ L NL +L +R N++  LP E+ +L
Sbjct: 57  RQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 116

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           KNL  LDL  N L  LP+EI     L  L L  N L  +   +  L NL  L LS N+L 
Sbjct: 117 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 176

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTS 357
           ++P         NE               +  L ++ ++ LS N+F  +P   G  Q   
Sbjct: 177 TLP---------NE---------------IEQLKNLKSLYLSENQFATFPKEIGQLQNLK 212

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           V  +N  +NQI  +P  I ++ K L  + + DN L +LP ++     L  L+L  NQ   
Sbjct: 213 VLFLN--NNQITILPNEI-AKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQFKI 269

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ++I  L NL+ L L NN LK LP  I  L+ L+ L L  N+L  LP EIG LK L  L
Sbjct: 270 IPKEIGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWL 329

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L  NQL +LP  I  L NL  L+ G N + ++ +EIG L+NL  L+LN+N  L  +P E
Sbjct: 330 SLVYNQLTTLPNEIEQLKNLQVLNFGSNQITTLSQEIGQLQNLKVLFLNNNQ-LTTLPKE 388

Query: 538 LALCSNLQIMSLDNCPLS 555
           +    NL+ + L+N  LS
Sbjct: 389 IGQLKNLKKLYLNNHQLS 406



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 171/316 (54%), Gaps = 26/316 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  +E+L +L+ LYL+ N+L +L   I  + NL  L L+ N LT
Sbjct: 117 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 176

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  L+ L+ L L  N+    P  + +L +LK+L+L  N+I  +  +I  L  L  
Sbjct: 177 TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQY 236

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN++  LP E+ +LKNL TLDL++N  + +PKEIG    L TLDL++N+L  +P  
Sbjct: 237 LYLSDNQLITLPKEIEQLKNLQTLDLSYNQFKIIPKEIGQLENLQTLDLRNNQLKTLPKE 296

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L LS N+L  +P+ + K  +L   ++    L++LP+ +             
Sbjct: 297 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEI------------- 343

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
                        Q  ++  +NF  NQI  +   I  + +NL  + + +N LT+LP ++G
Sbjct: 344 ------------EQLKNLQVLNFGSNQITTLSQEI-GQLQNLKVLFLNNNQLTTLPKEIG 390

Query: 401 TWVGLTELNLGTNQIS 416
               L +L L  +Q+S
Sbjct: 391 QLKNLKKLYLNNHQLS 406



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 154/310 (49%), Gaps = 27/310 (8%)

Query: 252 EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN 311
           ++L K + N   +  L+L   EL  +P  +G L NL RL L YN+L  +P+ + +  +L 
Sbjct: 38  KDLTKALQNPLDVRVLELSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 97

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
              +    L++LP  +   L ++  + L  N+ T  P                       
Sbjct: 98  LLYLRSNRLTTLPKEI-EQLKNLQVLDLGSNQLTVLPQE--------------------- 135

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
                 + KNL  + +  N LT+L  D+     L  L+L  NQ++ L  +I+ L NL+ L
Sbjct: 136 ----IEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSL 191

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            LS N     P  IG L+ LK L L  N++  LPNEI  LK+LQ L L  NQL++LP+ I
Sbjct: 192 YLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEI 251

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
             L NL  L +  N  + IP+EIG LENL TL L +N  L  +P E+    NLQ + L N
Sbjct: 252 EQLKNLQTLDLSYNQFKIIPKEIGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLSN 310

Query: 552 CPLSQIPSEI 561
             L+ +P EI
Sbjct: 311 NQLTILPQEI 320



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 91/157 (57%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDLS +    +P  + +L +L+ L L  N+L +LP +I  + NL  L L+ N LT
Sbjct: 255 KNLQTLDLSYNQFKIIPKEIGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLT 314

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  L+ L  L L +N+L  LP  + +L +L++L    N+I T+  +I  L NL +
Sbjct: 315 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQVLNFGSNQITTLSQEIGQLQNLKV 374

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L + +N++  LP E+G+LKNL  L L ++ L    KE
Sbjct: 375 LFLNNNQLTTLPKEIGQLKNLKKLYLNNHQLSSEEKE 411


>gi|338718816|ref|XP_001915867.2| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Equus caballus]
          Length = 1374

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 217/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   LT L +  NQ+  L + I  LV++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNLTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L   ++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVTNLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 159/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L TL +  N+L+ +PD +G L+++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNLTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V   N   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--TNLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  +   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMVEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|351715294|gb|EHB18213.1| hypothetical protein GW7_20513, partial [Heterocephalus glaber]
          Length = 863

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 146/506 (28%), Positives = 247/506 (48%), Gaps = 54/506 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS-QIGYVTNLTCLGLAENSLTSLPD 164
           L++S + I+H+P  +  L ++ +L+L  + + + PS  I  + NL  L L++N L  +P+
Sbjct: 220 LNVSHNQISHIPKEILHLGNIRQLFLNDSYIENFPSPGIESLRNLEILSLSKNKLRHIPN 279

Query: 165 SLANLQQLRVLDLRHNKLN-----------------------ELPMVVYKLTSLKILYLR 201
           +L NLQ LR+LDL +NKL                         LP  + +L SL+ L L 
Sbjct: 280 TLPNLQNLRILDLEYNKLTIFPKALCFLPKLISLNLTGNMIGSLPKEIRELKSLENLLLD 339

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N++  +  +I  L+ +  L + DNK+  +  ++   K L  L L  N  +++P+ I  C
Sbjct: 340 HNKLTFLAVEIFQLNKIKELQLTDNKLEVISHKIENFKELRILTLDKNLAKKIPERISYC 399

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
            ML  L L  N+L+ +P  +  L NL +L ++ N +  + E +S   ++      G  + 
Sbjct: 400 VMLERLSLSDNKLIELPKNIYKLKNLRKLHVNRNYMVRITEDISHLNNICSLEFSGNIIK 459

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
           ++P   + +   +  + L+ NK   +P  G     S+Y ++F  N I +IP  + S +K 
Sbjct: 460 NIPIE-IKNCRKLTKVELNYNKIQQFPV-GLCALDSLYYLSFNGNSISEIPVDV-SFSKQ 516

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           L  + + +N LT  P  L + + L  LNLG NQ  K+   I N+V+L VL+L  N  +  
Sbjct: 517 LVHLELNENKLTVFPDHLCSLINLKFLNLGKNQTRKIPPSISNMVSLHVLILCCNKFETF 576

Query: 442 PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV---------------- 485
           P  +  L KL+ LD+ EN+L ++P+EI  LK +Q+L   SNQ +                
Sbjct: 577 PRELCILEKLQVLDISENQLWTIPSEICNLKGVQKLNFSSNQFIHFPTELCQLQSLEELD 636

Query: 486 ----------SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
                      LP  + ++T L  L +  N ++ IP  IG L +L + Y  +N  ++ +P
Sbjct: 637 ISQSNGTKLTRLPEELSNMTQLKKLDISNNAIKEIPRNIGELRSLVSFYAYNNQ-ISYLP 695

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEI 561
                   LQ +SL    L+ +PS I
Sbjct: 696 LSFLTLKELQQLSLSGNNLTALPSAI 721



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 133/471 (28%), Positives = 224/471 (47%), Gaps = 50/471 (10%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T  P ++  L  L  L L GN + SLP +I  + +L  L L  N LT
Sbjct: 285 QNLRILDLEYNKLTIFPKALCFLPKLISLNLTGNMIGSLPKEIRELKSLENLLLDHNKLT 344

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L   +  L +++ L L  NKL  +   +     L+IL L  N  K +   I Y   L  
Sbjct: 345 FLAVEIFQLNKIKELQLTDNKLEVISHKIENFKELRILTLDKNLAKKIPERISYCVMLER 404

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+ DNK+ ELP  + +LKNL  L +  N++  + ++I +   + +L+   N + NIP  
Sbjct: 405 LSLSDNKLIELPKNIYKLKNLRKLHVNRNYMVRITEDISHLNNICSLEFSGNIIKNIPIE 464

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           + N   LT++ L+YN+++  P  L     L   +  G ++S +P   +S    + ++ L+
Sbjct: 465 IKNCRKLTKVELNYNKIQQFPVGLCALDSLYYLSFNGNSISEIPVD-VSFSKQLVHLELN 523

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP------------------YGIFSRA--- 379
            NK T +P        ++  +N   NQ  KIP                  +  F R    
Sbjct: 524 ENKLTVFP-DHLCSLINLKFLNLGKNQTRKIPPSISNMVSLHVLILCCNKFETFPRELCI 582

Query: 380 -KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ------------------------ 414
            + L  +++ +N L ++P ++    G+ +LN  +NQ                        
Sbjct: 583 LEKLQVLDISENQLWTIPSEICNLKGVQKLNFSSNQFIHFPTELCQLQSLEELDISQSNG 642

Query: 415 --ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
             +++L E++ N+  L+ L +SNN +K++P +IG LR L       N++  LP     LK
Sbjct: 643 TKLTRLPEELSNMTQLKKLDISNNAIKEIPRNIGELRSLVSFYAYNNQISYLPLSFLTLK 702

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           ELQ+L L  N L +LP AI +L +L  ++  +N L + P EI   + L+T+
Sbjct: 703 ELQQLSLSGNNLTALPSAIHNLVSLKEINFDDNPLLTPPMEICEGKQLYTI 753



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 3/150 (2%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLY---GNKLASLPSQIGYVTNLTCLGL 154
           C  + +  L+ S +   H P  + +L  LEEL +    G KL  LP ++  +T L  L +
Sbjct: 604 CNLKGVQKLNFSSNQFIHFPTELCQLQSLEELDISQSNGTKLTRLPEELSNMTQLKKLDI 663

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           + N++  +P ++  L+ L      +N+++ LP+    L  L+ L L  N +  +   I  
Sbjct: 664 SNNAIKEIPRNIGELRSLVSFYAYNNQISYLPLSFLTLKELQQLSLSGNNLTALPSAIHN 723

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTL 244
           L +L  ++  DN +   P E+ E K L T+
Sbjct: 724 LVSLKEINFDDNPLLTPPMEICEGKQLYTI 753


>gi|359461194|ref|ZP_09249757.1| Miro domain-containing protein [Acaryochloris sp. CCMEE 5410]
          Length = 448

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 138/417 (33%), Positives = 214/417 (51%), Gaps = 34/417 (8%)

Query: 70  PESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEEL 129
           P    P P T  ++  +  L  +K      E     LDL    +  LPP + +L H++ +
Sbjct: 54  PSLTAPAPLTASQQ--KGYLKAQKRIQAAHETKATTLDLQGLGLAELPPDIGQLRHVQII 111

Query: 130 YLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVV 189
           YL GN L +LP +IG +  L  L L+  +L  LP  +  L  L+ L+L  N+L  LP  +
Sbjct: 112 YLVGNSLQTLPPEIGQLKQLKTLNLSGGNLNRLPPEIGQLSNLQSLNLYKNQLRTLPPEI 171

Query: 190 YKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHN 249
            +L  L+ L +R NR+  + P+I  L NL  L++  N+++ LPPE+GELKNL  L + +N
Sbjct: 172 GQLKQLQRLDIRNNRLSALPPEIGGLQNLKRLTLHHNQLKTLPPEIGELKNLQKLAVDYN 231

Query: 250 HLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVH 309
            L  LP EIG    LV+L L +N+L ++P  +G L NL  L L++N+L  +P  +S+   
Sbjct: 232 QLHRLPVEIGQLENLVSLGLPYNKLKHLPVSIGQLNNLQVLGLNFNQLTHLPPEISQ--- 288

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
                                L  +  ++L+ NK   +P+        ++  N E   + 
Sbjct: 289 ---------------------LHRLEVLSLTSNKLQRFPT------EIIHLTNLEVLHLG 321

Query: 370 KIPYGI-FSRAKNLS-KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
             P  + FS   +L  +     N ++SLP ++G    L +LNLG+  +  L  +I  LVN
Sbjct: 322 ASPESLAFSVQFHLKEEYATTFNQVSSLPPEIGQLTQLQDLNLGSCTLLNLPPEIGQLVN 381

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           L++L LSNN L  +P  IG L  L+ L+L  N+L+SLP E+  L  L+ L L +N L
Sbjct: 382 LQMLGLSNNGLMSVPHEIGRLANLQGLELSYNQLKSLPPELKALTRLEYLNLSNNPL 438



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 186/376 (49%), Gaps = 47/376 (12%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
            LDL+   L ELP  + +L  ++I+YL  N ++T+ P+I  L  L  L++    +  LPP
Sbjct: 87  TLDLQGLGLAELPPDIGQLRHVQIIYLVGNSLQTLPPEIGQLKQLKTLNLSGGNLNRLPP 146

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+G+L NL +L+L  N L  LP EIG    L  LD+++N L  +P  +G L NL RL L 
Sbjct: 147 EIGQLSNLQSLNLYKNQLRTLPPEIGQLKQLQRLDIRNNRLSALPPEIGGLQNLKRLTLH 206

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
           +N+L+++P  + +  +L +  V+   L  LP  +                          
Sbjct: 207 HNQLKTLPPEIGELKNLQKLAVDYNQLHRLPVEI-------------------------G 241

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q  ++ S+   +N++  +P  I  +  NL  + +  N LT LP ++     L  L+L +N
Sbjct: 242 QLENLVSLGLPYNKLKHLPVSI-GQLNNLQVLGLNFNQLTHLPPEISQLHRLEVLSLTSN 300

Query: 414 QISKLSEDIQNLVNLEVLVLSN---------------------NLLKKLPSSIGNLRKLK 452
           ++ +   +I +L NLEVL L                       N +  LP  IG L +L+
Sbjct: 301 KLQRFPTEIIHLTNLEVLHLGASPESLAFSVQFHLKEEYATTFNQVSSLPPEIGQLTQLQ 360

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
            L+L    L +LP EIG L  LQ L L +N L+S+P  IG L NL  L +  N L+S+P 
Sbjct: 361 DLNLGSCTLLNLPPEIGQLVNLQMLGLSNNGLMSVPHEIGRLANLQGLELSYNQLKSLPP 420

Query: 513 EIGTLENLHTLYLNDN 528
           E+  L  L  L L++N
Sbjct: 421 ELKALTRLEYLNLSNN 436



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 189/365 (51%), Gaps = 14/365 (3%)

Query: 199 YLRFN-RIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           YL+   RI+  H      +  + L ++   + ELPP++G+L+++  + L  N L+ LP E
Sbjct: 70  YLKAQKRIQAAHE-----TKATTLDLQGLGLAELPPDIGQLRHVQIIYLVGNSLQTLPPE 124

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           IG    L TL+L    L  +P  +G L NL  L L  N+L ++P  + +   L   ++  
Sbjct: 125 IGQLKQLKTLNLSGGNLNRLPPEIGQLSNLQSLNLYKNQLRTLPPEIGQLKQLQRLDIRN 184

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             LS+LP  +   L ++  +TL  N+    P     +  ++  +  ++NQ+ ++P  I  
Sbjct: 185 NRLSALPPEI-GGLQNLKRLTLHHNQLKTLPPE-IGELKNLQKLAVDYNQLHRLPVEI-G 241

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           + +NL  + +  N L  LP+ +G    L  L L  NQ++ L  +I  L  LEVL L++N 
Sbjct: 242 QLENLVSLGLPYNKLKHLPVSIGQLNNLQVLGLNFNQLTHLPPEISQLHRLEVLSLTSNK 301

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF-LKELQRLILQSNQLVSLPRAIGHLTN 496
           L++ P+ I +L  L+ L L  +  ESL   + F LKE        NQ+ SLP  IG LT 
Sbjct: 302 LQRFPTEIIHLTNLEVLHLGASP-ESLAFSVQFHLKE--EYATTFNQVSSLPPEIGQLTQ 358

Query: 497 LSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ 556
           L  L++G   L ++P EIG L NL  L L++N  ++ +P E+   +NLQ + L    L  
Sbjct: 359 LQDLNLGSCTLLNLPPEIGQLVNLQMLGLSNNGLMS-VPHEIGRLANLQGLELSYNQLKS 417

Query: 557 IPSEI 561
           +P E+
Sbjct: 418 LPPEL 422


>gi|432104584|gb|ELK31196.1| Protein LAP2 [Myotis davidii]
          Length = 1457

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 218/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ I  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMIEEGI-SACENLQDLLLSSNALQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  LV++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGNWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQNETDSETQKMVLTNYMFPQQP 431



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 176/363 (48%), Gaps = 35/363 (9%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNALQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
            LP      + +  NIT+                     +    N+++ +P  +    K 
Sbjct: 336 QLP----PEIGNWKNITV---------------------LFLHSNKLETLPEEMGDMQK- 369

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV--LVLSNNLLK 439
           L  +N+ DN L +LP        LT + L  NQ SK    +QN  + E   +VL+N +  
Sbjct: 370 LKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQ-SKPLIPLQNETDSETQKMVLTNYMFP 428

Query: 440 KLP 442
           + P
Sbjct: 429 QQP 431



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  I   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMIEEGISACENLQDLLLSSNALQQLPETI 272


>gi|398339753|ref|ZP_10524456.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 448

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 149/402 (37%), Positives = 222/402 (55%), Gaps = 30/402 (7%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L G+KLA+L  +IG + NL  L L  N LT+LP+ +  LQ L+VLDL  N+L  LP  
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + KL +L++L L FNR+  +  ++  L NL +L++  NK+  LP ++G+L+NL  L+L  
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNL 172

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L  LP++IG    L  L+ Q N+L   P  +G L  L  L L +NRL ++ E + +  
Sbjct: 173 NKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQ 232

Query: 309 HLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
           +L   ++    L++LP   G L  L  +N                      +Y I     
Sbjct: 233 NLQILDLISNPLTTLPKEIGQLQKLQELN----------------------LYGI----- 265

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
           Q+  +P GI  + +NL  +N+    LT LP ++G    L +L L  NQ++ L E+I  L 
Sbjct: 266 QLKTLPQGII-QLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLK 324

Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
            L+ L L NN L+ LP  I  L+KL+ L LE N++ + P EIG L+ LQ L L  NQL +
Sbjct: 325 KLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTT 384

Query: 487 LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           LP+ IG L NL  L++  N L ++P+E+G L+ L  L L +N
Sbjct: 385 LPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNN 426



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 140/404 (34%), Positives = 215/404 (53%), Gaps = 26/404 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS S +  L   + KL +L++LYL  N+L +LP++IG + NL  L L  N LT LP  
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+VL+L  N+L  LP  V +L +L++L L  N++  +   I  L NL +L++  
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNL 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+  LP ++G+L+NL  L+   N L   PKEIG    L  L+L  N L  + + +  L 
Sbjct: 173 NKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N L ++P+ + +   L E N+ G  L +LP G++                 
Sbjct: 233 NLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGII----------------- 275

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                   Q  ++  +N  +  +  +P  I   +K L K+ +  N LT+LP ++G    L
Sbjct: 276 --------QLQNLRGLNLNYTHLTILPKEIGQLSK-LQKLYLYGNQLTTLPEEIGQLKKL 326

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            EL LG N +  L ++I+ L  L+ L L  N +   P  IG L+ L+ L+L  N+L +LP
Sbjct: 327 QELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLP 386

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            EIG L+ LQ L L+ NQL +LP+ +G L  L  L++  N + S
Sbjct: 387 QEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIAS 430



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 133/368 (36%), Positives = 198/368 (53%), Gaps = 8/368 (2%)

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           +IL L  +++ T+  +I  L NL  L +  N++  LP E+G+L+NL  LDL  N L  LP
Sbjct: 51  RILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILP 110

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
           KEIG    L  L+L  N L  +PD +G L NL  L L  N+L  +PE + +  +L   N+
Sbjct: 111 KEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNL 170

Query: 316 EGCALSSLPD--GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
               L+ LP+  G L +L  +N+     N+ T +P     Q   +  +N   N++  +  
Sbjct: 171 NLNKLTILPEKIGQLQNLQILNS---QGNQLTTFPKE-IGQLQKLQELNLGFNRLTTLRE 226

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
            +  + +NL  +++  N LT+LP ++G    L ELNL   Q+  L + I  L NL  L L
Sbjct: 227 EVV-QLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNL 285

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           +   L  LP  IG L KL+ L L  N+L +LP EIG LK+LQ L L +N L +LP+ I  
Sbjct: 286 NYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQ 345

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L  L  L +  N + + P+EIG L+NL  L L  N  L  +P E+    NLQ ++L+   
Sbjct: 346 LQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQ-LTTLPQEIGQLQNLQELNLEFNQ 404

Query: 554 LSQIPSEI 561
           L+ +P E+
Sbjct: 405 LATLPKEV 412



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 127/359 (35%), Positives = 183/359 (50%), Gaps = 33/359 (9%)

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           R L   L   K+   L+L+ + L  L KEIG    L  L L +N+L  +P+ +G L NL 
Sbjct: 38  RNLTEALQNPKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQ 97

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTA 346
            L L  N L  +P+ + K  +L   N+    L+ LPD  G L +L  +N   L  NK T 
Sbjct: 98  VLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLN---LDLNKLTI 154

Query: 347 YPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            P   G  Q   V ++N     I  +P  I  + +NL  +N + N LT+ P ++G    L
Sbjct: 155 LPEKIGQLQNLQVLNLNLNKLTI--LPEKI-GQLQNLQILNSQGNQLTTFPKEIGQLQKL 211

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            ELNLG N+++ L E++  L NL++L L +N L  LP  IG L+KL+ L+L   +L++LP
Sbjct: 212 QELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLP 271

Query: 466 N-----------------------EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
                                   EIG L +LQ+L L  NQL +LP  IG L  L  L +
Sbjct: 272 QGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYL 331

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           G N L+++P+EI  L+ L TLYL  N  +   P E+    NLQ ++L    L+ +P EI
Sbjct: 332 GNNPLRTLPKEIEQLQKLQTLYLEGNQ-ITTFPKEIGQLQNLQELNLGFNQLTTLPQEI 389


>gi|428173352|gb|EKX42255.1| hypothetical protein GUITHDRAFT_74163 [Guillardia theta CCMP2712]
          Length = 643

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 158/490 (32%), Positives = 241/490 (49%), Gaps = 39/490 (7%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           N+  +K+ I  LP  V  LT L+ L L  N+L +LP  IG +TNL  + L EN L  +P 
Sbjct: 18  NISATKNEIKELPAEVGLLTALQSLKLGKNRLIALPPSIGNLTNLQVISLEENKLKEIPS 77

Query: 165 SLANLQQLRVLDLRHNKLNELPM--VVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
            + N   LR +D+ HN L  LP+   + +L  LK L +  N+I ++   +  L+NL +L 
Sbjct: 78  QIENCGSLRTIDVSHNNLRRLPIPRKISRLKLLKELRVAHNQIDSIPYTMSLLNNLKILD 137

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM-- 280
           +  N +      L ++  LV L+ A N   ELP EI   T L  L +Q N++ +IPD+  
Sbjct: 138 VSSNHLTSFDTVLTDIPQLVVLNFAKNAATELPVEIAKMTNLRELSVQGNQIRSIPDIAA 197

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLTSINNIT 338
           L  L NL  L L YN++  +P ++SK  +L E +   CA +SL D    +  L  +  I 
Sbjct: 198 LFQLTNLEVLYLRYNQVTFLPGSISKFTNLRELD---CAYNSLVDTPPDIRELKRLKRID 254

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
            S N     P    T    V  ++  +NQ+ ++P  +     +L  ++  +N +  LP++
Sbjct: 255 FSHNSLRGIPPDIGT-LEEVEYLDLSYNQLQELPREV-GFMTSLQSLDFSNNQIVFLPVE 312

Query: 399 LGTW-VGLTELNLGTNQISK--LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           L      LT L+   N I+   L  ++ NL NLE   LS+NLL +LPSSI  L  L   +
Sbjct: 313 LEALETSLTLLSADNNAITDPTLPVELGNLRNLERFDLSSNLLSRLPSSIKRLESLVYFN 372

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG----------------------- 492
           +  N+L ++P E+  LK L  L L+ N L+S+P  IG                       
Sbjct: 373 VNSNRLTTIPPEVKGLKSLIELHLKDNLLISMPPEIGSLSSLTTLSLDGNQFMSIPTTMI 432

Query: 493 -HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
             L  L  L  G+N L+S+   I  L  L  L L +N  L  +P EL  C+ L+ +SL+ 
Sbjct: 433 FQLFTLEKLEAGDNRLRSVSPSISQLSCLTLLSLKNNN-LRVLPRELGRCTGLKTLSLNA 491

Query: 552 CPLSQIPSEI 561
             +  IP ++
Sbjct: 492 NDIIAIPDQL 501



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 147/488 (30%), Positives = 246/488 (50%), Gaps = 35/488 (7%)

Query: 106 LDLSKSSITHLP--PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLP 163
           +D+S +++  LP    + +L  L+EL +  N++ S+P  +  + NL  L ++ N LTS  
Sbjct: 88  IDVSHNNLRRLPIPRKISRLKLLKELRVAHNQIDSIPYTMSLLNNLKILDVSSNHLTSFD 147

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYL---SNLSM 220
             L ++ QL VL+   N   ELP+ + K+T+L+ L ++ N+I+++ PDI  L   +NL +
Sbjct: 148 TVLTDIPQLVVLNFAKNAATELPVEIAKMTNLRELSVQGNQIRSI-PDIAALFQLTNLEV 206

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +R N++  LP  + +  NL  LD A+N L + P +I     L  +D  HN L  IP  
Sbjct: 207 LYLRYNQVTFLPGSISKFTNLRELDCAYNSLVDTPPDIRELKRLKRIDFSHNSLRGIPPD 266

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP---DGLLSSLTSI--- 334
           +G L  +  L LSYN+L+ +P  +     L   +     +  LP   + L +SLT +   
Sbjct: 267 IGTLEEVEYLDLSYNQLQELPREVGFMTSLQSLDFSNNQIVFLPVELEALETSLTLLSAD 326

Query: 335 -NNIT------------------LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
            N IT                  LS N  +  PS    +  S+   N   N++  IP  +
Sbjct: 327 NNAITDPTLPVELGNLRNLERFDLSSNLLSRLPSSI-KRLESLVYFNVNSNRLTTIPPEV 385

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL-SEDIQNLVNLEVLVLS 434
               K+L ++++KDNLL S+P ++G+   LT L+L  NQ   + +  I  L  LE L   
Sbjct: 386 -KGLKSLIELHLKDNLLISMPPEIGSLSSLTTLSLDGNQFMSIPTTMIFQLFTLEKLEAG 444

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
           +N L+ +  SI  L  L  L L+ N L  LP E+G    L+ L L +N ++++P  +  L
Sbjct: 445 DNRLRSVSPSISQLSCLTLLSLKNNNLRVLPRELGRCTGLKTLSLNANDIIAIPDQLCGL 504

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
             L  L++ +N L  +P+ IG L NL +L   DN  +  +P   +  ++L+ + +     
Sbjct: 505 ARLRRLTLDKNGLCFLPDTIGCLVNLRSLRFRDNLIM-RLPPSFSSLTSLRELDMSKNKF 563

Query: 555 SQIPSEIV 562
           + IP  ++
Sbjct: 564 TNIPQSLL 571



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 218/462 (47%), Gaps = 34/462 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD- 164
           LD+S + +T     +  +  L  L    N    LP +I  +TNL  L +  N + S+PD 
Sbjct: 136 LDVSSNHLTSFDTVLTDIPQLVVLNFAKNAATELPVEIAKMTNLRELSVQGNQIRSIPDI 195

Query: 165 -SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
            +L  L  L VL LR+N++  LP  + K T+L+ L   +N +    PDI+ L  L  +  
Sbjct: 196 AALFQLTNLEVLYLRYNQVTFLPGSISKFTNLRELDCAYNSLVDTPPDIRELKRLKRIDF 255

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV-------- 275
             N +R +PP++G L+ +  LDL++N L+ELP+E+G  T L +LD  +N++V        
Sbjct: 256 SHNSLRGIPPDIGTLEEVEYLDLSYNQLQELPREVGFMTSLQSLDFSNNQIVFLPVELEA 315

Query: 276 ------------------NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
                              +P  LGNL NL R  LS N L  +P ++ +   L  FNV  
Sbjct: 316 LETSLTLLSADNNAITDPTLPVELGNLRNLERFDLSSNLLSRLPSSIKRLESLVYFNVNS 375

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             L+++P  +   L S+  + L  N   + P    +  +       + NQ   IP  +  
Sbjct: 376 NRLTTIPPEV-KGLKSLIELHLKDNLLISMPPEIGSLSSLTTLSL-DGNQFMSIPTTMIF 433

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           +   L K+   DN L S+   +     LT L+L  N +  L  ++     L+ L L+ N 
Sbjct: 434 QLFTLEKLEAGDNRLRSVSPSISQLSCLTLLSLKNNNLRVLPRELGRCTGLKTLSLNAND 493

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           +  +P  +  L +L+ L L++N L  LP+ IG L  L+ L  + N ++ LP +   LT+L
Sbjct: 494 IIAIPDQLCGLARLRRLTLDKNGLCFLPDTIGCLVNLRSLRFRDNLIMRLPPSFSSLTSL 553

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
             L + +N   +IP+ +  L  L  L    N     IP+ L+
Sbjct: 554 RELDMSKNKFTNIPQSLLDLTGLTRLRCGHNP----IPYSLS 591



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 211/400 (52%), Gaps = 10/400 (2%)

Query: 181 KLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKN 240
           KL   P ++  +  L  +    N IK +  ++  L+ L  L +  N++  LPP +G L N
Sbjct: 2   KLTVFPGLICDIFILSNISATKNEIKELPAEVGLLTALQSLKLGKNRLIALPPSIGNLTN 61

Query: 241 LVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL--VNIPDMLGNLINLTRLRLSYNRLE 298
           L  + L  N L+E+P +I NC  L T+D+ HN L  + IP  +  L  L  LR+++N+++
Sbjct: 62  LQVISLEENKLKEIPSQIENCGSLRTIDVSHNNLRRLPIPRKISRLKLLKELRVAHNQID 121

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
           S+P T+S   +L   +V    L+S  D +L+ +  +  +  ++N  T  P     + T++
Sbjct: 122 SIPYTMSLLNNLKILDVSSNHLTSF-DTVLTDIPQLVVLNFAKNAATELPVEI-AKMTNL 179

Query: 359 YSINFEHNQIDKIP-YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
             ++ + NQI  IP      +  NL  + ++ N +T LP  +  +  L EL+   N +  
Sbjct: 180 RELSVQGNQIRSIPDIAALFQLTNLEVLYLRYNQVTFLPGSISKFTNLRELDCAYNSLVD 239

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
              DI+ L  L+ +  S+N L+ +P  IG L +++ LDL  N+L+ LP E+GF+  LQ L
Sbjct: 240 TPPDIRELKRLKRIDFSHNSLRGIPPDIGTLEEVEYLDLSYNQLQELPREVGFMTSLQSL 299

Query: 478 ILQSNQLVSLPRAIGHL-TNLSYLSVGENNLQ--SIPEEIGTLENLHTLYLNDNTCLNNI 534
              +NQ+V LP  +  L T+L+ LS   N +   ++P E+G L NL    L+ N  L+ +
Sbjct: 300 DFSNNQIVFLPVELEALETSLTLLSADNNAITDPTLPVELGNLRNLERFDLSSN-LLSRL 358

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
           P  +    +L   ++++  L+ IP E V G  SLI  +LK
Sbjct: 359 PSSIKRLESLVYFNVNSNRLTTIPPE-VKGLKSLIELHLK 397



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 134/433 (30%), Positives = 226/433 (52%), Gaps = 32/433 (7%)

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT  P  + ++  L  +    N++ ELP  V  LT+L+ L L  NR+  + P I  L+NL
Sbjct: 3   LTVFPGLICDIFILSNISATKNEIKELPAEVGLLTALQSLKLGKNRLIALPPSIGNLTNL 62

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL--PKEIGNCTMLVTLDLQHNELVN 276
            ++S+ +NK++E+P ++    +L T+D++HN+L  L  P++I    +L  L + HN++ +
Sbjct: 63  QVISLEENKLKEIPSQIENCGSLRTIDVSHNNLRRLPIPRKISRLKLLKELRVAHNQIDS 122

Query: 277 IPDMLGNLINLTRLRLSYNRLES-----------------------VPETLSKCVHLNEF 313
           IP  +  L NL  L +S N L S                       +P  ++K  +L E 
Sbjct: 123 IPYTMSLLNNLKILDVSSNHLTSFDTVLTDIPQLVVLNFAKNAATELPVEIAKMTNLREL 182

Query: 314 NVEGCALSSLPD-GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
           +V+G  + S+PD   L  LT++  + L  N+ T  P G  ++FT++  ++  +N +   P
Sbjct: 183 SVQGNQIRSIPDIAALFQLTNLEVLYLRYNQVTFLP-GSISKFTNLRELDCAYNSLVDTP 241

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I    K L +++   N L  +P D+GT   +  L+L  NQ+ +L  ++  + +L+ L 
Sbjct: 242 PDI-RELKRLKRIDFSHNSLRGIPPDIGTLEEVEYLDLSYNQLQELPREVGFMTSLQSLD 300

Query: 433 LSNNLLKKLPSSIGNLR-KLKCLDLEENKLE--SLPNEIGFLKELQRLILQSNQLVSLPR 489
            SNN +  LP  +  L   L  L  + N +   +LP E+G L+ L+R  L SN L  LP 
Sbjct: 301 FSNNQIVFLPVELEALETSLTLLSADNNAITDPTLPVELGNLRNLERFDLSSNLLSRLPS 360

Query: 490 AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
           +I  L +L Y +V  N L +IP E+  L++L  L+L DN  L ++P E+   S+L  +SL
Sbjct: 361 SIKRLESLVYFNVNSNRLTTIPPEVKGLKSLIELHLKDN-LLISMPPEIGSLSSLTTLSL 419

Query: 550 DNCPLSQIPSEIV 562
           D      IP+ ++
Sbjct: 420 DGNQFMSIPTTMI 432



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 149/373 (39%), Gaps = 101/373 (27%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYV------------ 146
           K  N+  LD + +S+   PP + +L  L+ +    N L  +P  IG +            
Sbjct: 223 KFTNLRELDCAYNSLVDTPPDIRELKRLKRIDFSHNSLRGIPPDIGTLEEVEYLDLSYNQ 282

Query: 147 -----------------------------------TNLTCLGLAENSLT--SLPDSLANL 169
                                              T+LT L    N++T  +LP  L NL
Sbjct: 283 LQELPREVGFMTSLQSLDFSNNQIVFLPVELEALETSLTLLSADNNAITDPTLPVELGNL 342

Query: 170 QQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR 229
           + L   DL  N L+ LP  + +L SL    +  NR+ T+ P+++ L +L  L ++DN + 
Sbjct: 343 RNLERFDLSSNLLSRLPSSIKRLESLVYFNVNSNRLTTIPPEVKGLKSLIELHLKDNLLI 402

Query: 230 ELPPELG-----------------------------------------------ELKNLV 242
            +PPE+G                                               +L  L 
Sbjct: 403 SMPPEIGSLSSLTTLSLDGNQFMSIPTTMIFQLFTLEKLEAGDNRLRSVSPSISQLSCLT 462

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            L L +N+L  LP+E+G CT L TL L  N+++ IPD L  L  L RL L  N L  +P+
Sbjct: 463 LLSLKNNNLRVLPRELGRCTGLKTLSLNANDIIAIPDQLCGLARLRRLTLDKNGLCFLPD 522

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
           T+   V+L         +  LP    SSLTS+  + +S+NKFT  P       T +  + 
Sbjct: 523 TIGCLVNLRSLRFRDNLIMRLPPS-FSSLTSLRELDMSKNKFTNIPQSL-LDLTGLTRLR 580

Query: 363 FEHNQIDKIPYGI 375
             HN    IPY +
Sbjct: 581 CGHN---PIPYSL 590



 Score = 39.3 bits (90), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C    +  L L K+ +  LP ++  L +L  L    N +  LP     +T+L  L +++N
Sbjct: 502 CGLARLRRLTLDKNGLCFLPDTIGCLVNLRSLRFRDNLIMRLPPSFSSLTSLRELDMSKN 561

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKL 182
             T++P SL +L  L  L   HN +
Sbjct: 562 KFTNIPQSLLDLTGLTRLRCGHNPI 586


>gi|260788664|ref|XP_002589369.1| hypothetical protein BRAFLDRAFT_77815 [Branchiostoma floridae]
 gi|229274546|gb|EEN45380.1| hypothetical protein BRAFLDRAFT_77815 [Branchiostoma floridae]
          Length = 869

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 140/488 (28%), Positives = 242/488 (49%), Gaps = 41/488 (8%)

Query: 74  KPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYG 133
           +P P  +K   + A LN++ + +  +    L LDLS   +T +P  V  +T LE L +  
Sbjct: 6   RPSPPPRKSI-MAAGLNLQPQTVNGR----LKLDLSNQGLTSIPEEVFDITDLEFLDVSR 60

Query: 134 NKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLT 193
           NKL S+P  IG +  L+ L    N LT LP ++ +LQ+L  L +  NKL  LP       
Sbjct: 61  NKLTSIPEAIGRLQKLSRLDAYSNMLTCLPQAIGSLQKLTHLYVYRNKLANLP------- 113

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
                           P I+ L  L++LS+ DN++ E+P  +  L NL  L +++N L  
Sbjct: 114 ----------------PGIEKLQKLTLLSIYDNQLTEVPSGVCSLPNLEVLSVSNNKLST 157

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
            P  +     L  L ++ N+L  +P  + +L NL  L +S N+L + P  + K   L E 
Sbjct: 158 FPPGVEKLQKLRKLFIKDNQLTEVPSGVCSLPNLEVLNVSNNKLSTFPPGVEKLQKLKEL 217

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
            +    L+ +P G + SL ++  + +  NK + +P G          +   +N++   P 
Sbjct: 218 GIYDNQLTEVPSG-VCSLPNLEVLNVYNNKLSTFPPG----------VKCHNNKLSTFPP 266

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
           G+  + + L ++ + DN LT +P  + +   L +L+   N++S     ++ L  L  L +
Sbjct: 267 GV-EKLQKLKELGIYDNQLTEVPSGVCSLPNLEKLSAYNNKLSTFPPGVEKLQKLRELYI 325

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
            +N L ++PS + +L  L+ L +  NKL + P  +  L++L+ L +  NQL  +P  +  
Sbjct: 326 YDNQLTEVPSGVCSLPNLEMLGVYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCS 385

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L NL  LSV  N L + P  +  L+ L  LY+NDN  L  +P  +    NL+++S+   P
Sbjct: 386 LPNLEMLSVCNNKLSTFPPGVEKLQKLRKLYINDNQ-LTEVPSCVCSLPNLEVLSVGPNP 444

Query: 554 LSQIPSEI 561
           + ++P ++
Sbjct: 445 IRRLPDDV 452



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 252/515 (48%), Gaps = 43/515 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + + +L + ++ + +LPP +EKL  L  L +Y N+L  +PS +  + NL  L ++ N L+
Sbjct: 97  QKLTHLYVYRNKLANLPPGIEKLQKLTLLSIYDNQLTEVPSGVCSLPNLEVLSVSNNKLS 156

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           + P  +  LQ+LR L ++ N+L E+P  V  L +L++L +  N++ T  P ++ L  L  
Sbjct: 157 TFPPGVEKLQKLRKLFIKDNQLTEVPSGVCSLPNLEVLNVSNNKLSTFPPGVEKLQKLKE 216

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC---------------TMLV 265
           L + DN++ E+P  +  L NL  L++ +N L   P  +  C                 L 
Sbjct: 217 LGIYDNQLTEVPSGVCSLPNLEVLNVYNNKLSTFPPGV-KCHNNKLSTFPPGVEKLQKLK 275

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
            L +  N+L  +P  + +L NL +L    N+L + P  + K   L E  +    L+ +P 
Sbjct: 276 ELGIYDNQLTEVPSGVCSLPNLEKLSAYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPS 335

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
           G+  SL ++  + +  NK + +P G   +   +  +    NQ+ ++P G+ S   NL  +
Sbjct: 336 GV-CSLPNLEMLGVYNNKLSTFPPGV-EKLQKLRELYIYDNQLTEVPSGVCS-LPNLEML 392

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           ++ +N L++ P  +     L +L +  NQ++++   + +L NLEVL +  N +++LP  +
Sbjct: 393 SVCNNKLSTFPPGVEKLQKLRKLYINDNQLTEVPSCVCSLPNLEVLSVGPNPIRRLPDDV 452

Query: 446 GNLRKLKCLD------------------LEE-----NKLESLPNEIGFLKELQRLILQSN 482
             L +LK L                   LEE      K + +P+E+G L+ L  L L  N
Sbjct: 453 TRLARLKTLSVPGCQFDEFPRQVLQLKTLEELYAGGCKFDIVPDEVGNLQHLWHLSLDIN 512

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
            L +LP  + HL NL  + + +N   + PE +  L  +  L + +N  +  +P  L    
Sbjct: 513 LLRTLPSTMSHLHNLRVVRLNKNKFDTFPEVLCELPAMEKLNIRNNN-ITRLPTALHRAD 571

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQG 577
            L+ +++   P+S  P E+   G   I+ +LK + 
Sbjct: 572 KLKDLNVSGNPMSYPPQEVRKQGTGAIMAFLKQEA 606



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 169/349 (48%), Gaps = 4/349 (1%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+  L    + ++  PP VEKL  L ELY+Y N+L  +PS +  + NL  LG+  N
Sbjct: 292 CSLPNLEKLSAYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEMLGVYNN 351

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L++ P  +  LQ+LR L +  N+L E+P  V  L +L++L +  N++ T  P ++ L  
Sbjct: 352 KLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEMLSVCNNKLSTFPPGVEKLQK 411

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L + DN++ E+P  +  L NL  L +  N +  LP ++     L TL +   +    
Sbjct: 412 LRKLYINDNQLTEVPSCVCSLPNLEVLSVGPNPIRRLPDDVTRLARLKTLSVPGCQFDEF 471

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  +  L  L  L     + + VP+ +    HL   +++   L +LP   +S L ++  +
Sbjct: 472 PRQVLQLKTLEELYAGGCKFDIVPDEVGNLQHLWHLSLDINLLRTLP-STMSHLHNLRVV 530

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            L++NKF  +P     +  ++  +N  +N I ++P  +  RA  L  +N+  N ++  P 
Sbjct: 531 RLNKNKFDTFPEVL-CELPAMEKLNIRNNNITRLPTALH-RADKLKDLNVSGNPMSYPPQ 588

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           ++    G   +     Q ++  E I +  N   + +S    K L  S+G
Sbjct: 589 EVRKQ-GTGAIMAFLKQEAEKDERILSAFNRLSVRMSQTQWKPLARSLG 636



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 158/325 (48%), Gaps = 3/325 (0%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K + +  L +  + +T +P  V  L +LE+L  Y NKL++ P  +  +  L  L + +N 
Sbjct: 270 KLQKLKELGIYDNQLTEVPSGVCSLPNLEKLSAYNNKLSTFPPGVEKLQKLRELYIYDNQ 329

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT +P  + +L  L +L + +NKL+  P  V KL  L+ LY+  N++  V   +  L NL
Sbjct: 330 LTEVPSGVCSLPNLEMLGVYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNL 389

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            MLS+ +NK+   PP + +L+ L  L +  N L E+P  + +   L  L +  N +  +P
Sbjct: 390 EMLSVCNNKLSTFPPGVEKLQKLRKLYINDNQLTEVPSCVCSLPNLEVLSVGPNPIRRLP 449

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           D +  L  L  L +   + +  P  + +   L E    GC    +PD  + +L  + +++
Sbjct: 450 DDVTRLARLKTLSVPGCQFDEFPRQVLQLKTLEELYAGGCKFDIVPDE-VGNLQHLWHLS 508

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           L  N     PS   +   ++  +    N+ D  P  +      + K+N+++N +T LP  
Sbjct: 509 LDINLLRTLPSTM-SHLHNLRVVRLNKNKFDTFPE-VLCELPAMEKLNIRNNNITRLPTA 566

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQ 423
           L     L +LN+  N +S   ++++
Sbjct: 567 LHRADKLKDLNVSGNPMSYPPQEVR 591


>gi|440894335|gb|ELR46812.1| hypothetical protein M91_11597 [Bos grunniens mutus]
          Length = 863

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 248/483 (51%), Gaps = 30/483 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++S + I+H+P  + +L +++EL+L  N +   PS +  + NL  L LA+N L  +PD+
Sbjct: 219 LNVSYNQISHIPKEISQLGNIKELFLNNNCIEDFPSGLESLKNLEILNLAKNKLRHIPDA 278

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV----------------H 209
           L++L+ LR L+L +N+L   P  +  L  L  L L  N I ++                H
Sbjct: 279 LSSLKNLRALNLEYNRLTIFPKALCFLPKLISLNLTGNLINSLPKEIKELKNLEKLLLDH 338

Query: 210 PDIQYLS-------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
             + +L+        +  L + DNK+  +  ++   K L  L L  N L+++P+ I +C 
Sbjct: 339 NKLTFLAVEIFLLLKMKELQLTDNKLEVISNKIENFKELRILILDKNLLKDMPENISHCA 398

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           +L  L L  N+L  +P  +  L NL +L ++ N L  +PE +S   ++      G  ++ 
Sbjct: 399 VLECLSLSDNKLTELPKNIHKLKNLRKLHINRNYLVKIPEYISHLNNMFSLEFSGNFITD 458

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
            P   + S  +I  + LS NK   +P  G     S+Y ++   N I +IP  I S +K L
Sbjct: 459 FPIE-IKSCKNIAKVELSYNKIMYFPL-GLCALDSLYYLSLNGNYISEIPVDI-SFSKQL 515

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             +   +N L      L + + L  L+LG N+I K+   I N+V+L VL+L  N L+  P
Sbjct: 516 LHLEFNENKLLLFSEHLCSLINLEYLDLGKNKIRKIPPSISNMVSLHVLILCYNKLETFP 575

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
           + +  L  L+ LDL EN+++++P+EI  LK +Q+L + +NQ +  P  + HL +L  L++
Sbjct: 576 TEVCTLDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNNQFIYFPVELCHLQSLEELNI 635

Query: 503 GENN---LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPS 559
            + N   L  +PEE+  +  L  L +++N  +  +P  +    +L  ++ DN  +  +PS
Sbjct: 636 SQINGKKLTRLPEELSNMTKLKGLDISNN-AIREMPTNIGELRSLVSLNADNNQIRYLPS 694

Query: 560 EIV 562
             +
Sbjct: 695 SFL 697



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 204/421 (48%), Gaps = 29/421 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L+ + +  +   +E    L  L L  N L  +P  I +   L CL L++N LT LP +
Sbjct: 357 LQLTDNKLEVISNKIENFKELRILILDKNLLKDMPENISHCAVLECLSLSDNKLTELPKN 416

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ LR L +  N L ++P  +  L ++  L    N I     +I+   N++ + +  
Sbjct: 417 IHKLKNLRKLHINRNYLVKIPEYISHLNNMFSLEFSGNFITDFPIEIKSCKNIAKVELSY 476

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NKI   P  L  L +L  L L  N++ E+P +I     L+ L+   N+L+   + L +LI
Sbjct: 477 NKIMYFPLGLCALDSLYYLSLNGNYISEIPVDISFSKQLLHLEFNENKLLLFSEHLCSLI 536

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N++  +P ++S  V                        S++ + L  NK  
Sbjct: 537 NLEYLDLGKNKIRKIPPSISNMV------------------------SLHVLILCYNKLE 572

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P+   T   ++  ++   NQI  IP  I    K + K+N+ +N     P++L     L
Sbjct: 573 TFPTEVCT-LDNLRVLDLSENQIQTIPSEI-CNLKGIQKLNISNNQFIYFPVELCHLQSL 630

Query: 406 TELNLGT---NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
            ELN+      ++++L E++ N+  L+ L +SNN ++++P++IG LR L  L+ + N++ 
Sbjct: 631 EELNISQINGKKLTRLPEELSNMTKLKGLDISNNAIREMPTNIGELRSLVSLNADNNQIR 690

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP+    L  LQ+L L  N L  LP  I +L +L  ++  +N L   P EI   + L+T
Sbjct: 691 YLPSSFLSLNALQQLNLSGNNLSVLPSGIYNLFSLKEINFDDNPLLRPPMEICKGKQLYT 750

Query: 523 L 523
           +
Sbjct: 751 I 751



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 223/474 (47%), Gaps = 50/474 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+L+K+ + H+P ++  L +L  L L  N+L   P  + ++  L  L L  N + SLP  
Sbjct: 265 LNLAKNKLRHIPDALSSLKNLRALNLEYNRLTIFPKALCFLPKLISLNLTGNLINSLPKE 324

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKL-----------------------TSLKILYLRF 202
           +  L+ L  L L HNKL  L + ++ L                         L+IL L  
Sbjct: 325 IKELKNLEKLLLDHNKLTFLAVEIFLLLKMKELQLTDNKLEVISNKIENFKELRILILDK 384

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N +K +  +I + + L  LS+ DNK+ ELP  + +LKNL  L +  N+L ++P+ I +  
Sbjct: 385 NLLKDMPENISHCAVLECLSLSDNKLTELPKNIHKLKNLRKLHINRNYLVKIPEYISHLN 444

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            + +L+   N + + P  + +  N+ ++ LSYN++   P  L     L   ++ G  +S 
Sbjct: 445 NMFSLEFSGNFITDFPIEIKSCKNIAKVELSYNKIMYFPLGLCALDSLYYLSLNGNYISE 504

Query: 323 LPDGL----------------------LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYS 360
           +P  +                      L SL ++  + L +NK    P    +   S++ 
Sbjct: 505 IPVDISFSKQLLHLEFNENKLLLFSEHLCSLINLEYLDLGKNKIRKIPPS-ISNMVSLHV 563

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
           +   +N+++  P  + +   NL  +++ +N + ++P ++    G+ +LN+  NQ      
Sbjct: 564 LILCYNKLETFPTEVCT-LDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNNQFIYFPV 622

Query: 421 DIQNLVNLEVLVLSN---NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           ++ +L +LE L +S      L +LP  + N+ KLK LD+  N +  +P  IG L+ L  L
Sbjct: 623 ELCHLQSLEELNISQINGKKLTRLPEELSNMTKLKGLDISNNAIREMPTNIGELRSLVSL 682

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
              +NQ+  LP +   L  L  L++  NNL  +P  I  L +L  +  +DN  L
Sbjct: 683 NADNNQIRYLPSSFLSLNALQQLNLSGNNLSVLPSGIYNLFSLKEINFDDNPLL 736


>gi|398341356|ref|ZP_10526059.1| hypothetical protein LkirsB1_19555 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 400

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/381 (34%), Positives = 209/381 (54%), Gaps = 49/381 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + +L +L+ LYL+ N+L +LP++IG + NL  L L  N LT+LP+ 
Sbjct: 51  LDLSEQKLKTLPKEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLTTLPNE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L+ LDL HN+L  LP                        +I  L NL +L + +
Sbjct: 111 IGQLINLQTLDLIHNQLVILP-----------------------KEINQLQNLRVLGLSN 147

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+++ LP E+G+L+NL TLDL  N L+ LP EIG    L TLDL  N L  +P  +G L 
Sbjct: 148 NQLKILPKEIGQLENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLK 207

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L LS N+L+++P+ + +  +L   ++    L++LP+  +  L ++  + L +N  T
Sbjct: 208 NLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNE-IGQLKNLYELYLGKNLLT 266

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++  ++  +NQ   IP  I  + +NL  + +++N  T+LP         
Sbjct: 267 TLPK-EVGQLKNLKMLDLGYNQFKIIPNEI-EQLQNLRTLRLRNNQFTALP--------- 315

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
                         ++I+ L NL+VL L+NN LK LP+ I  L+ L+ LDL +N+L++LP
Sbjct: 316 --------------KEIRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLP 361

Query: 466 NEIGFLKELQRLILQSNQLVS 486
           NEI  L+ LQ L L++N+L S
Sbjct: 362 NEIEKLQNLQVLDLRNNELSS 382



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 140/398 (35%), Positives = 202/398 (50%), Gaps = 50/398 (12%)

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           + T L  +L N   +RVLDL   KL  LP  + +L +L+ LYL  N++ T          
Sbjct: 34  AYTDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQTLYLWNNQLTT---------- 83

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
                        LP E+G+LKNL TL+L  N L  LP EIG    L TLDL HN+LV +
Sbjct: 84  -------------LPNEIGQLKNLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVIL 130

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  +  L NL  L LS N+L+ +P+ + +  +L   ++    L +LP+ +   L ++  +
Sbjct: 131 PKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYTNQLKALPNEI-GQLKNLQTL 189

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            LS+N  T  P                             + KNL ++ +  N L +LP 
Sbjct: 190 DLSKNILTILPKE-------------------------IGQLKNLRELYLSSNQLKTLPK 224

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++G    L  L+L  NQ++ L  +I  L NL  L L  NLL  LP  +G L+ LK LDL 
Sbjct: 225 EIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLKMLDLG 284

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
            N+ + +PNEI  L+ L+ L L++NQ  +LP+ I  L NL  L +  N L+++P EI  L
Sbjct: 285 YNQFKIIPNEIEQLQNLRTLRLRNNQFTALPKEIRQLQNLQVLFLNNNQLKTLPNEIEKL 344

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           +NL  L LNDN  L  +P E+    NLQ++ L N  LS
Sbjct: 345 QNLQVLDLNDNQ-LKTLPNEIEKLQNLQVLDLRNNELS 381



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/225 (41%), Positives = 131/225 (58%), Gaps = 3/225 (1%)

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + LS  K    P     Q  ++ ++   +NQ+  +P  I  + KNL  +N+  N LT+LP
Sbjct: 51  LDLSEQKLKTLPKE-IGQLQNLQTLYLWNNQLTTLPNEI-GQLKNLQTLNLDTNQLTTLP 108

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G  + L  L+L  NQ+  L ++I  L NL VL LSNN LK LP  IG L  L+ LDL
Sbjct: 109 NEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQTLDL 168

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+L++LPNEIG LK LQ L L  N L  LP+ IG L NL  L +  N L+++P+EIG 
Sbjct: 169 YTNQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQ 228

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           LENL TL+L+DN  L  +P E+    NL  + L    L+ +P E+
Sbjct: 229 LENLQTLHLSDNQ-LTTLPNEIGQLKNLYELYLGKNLLTTLPKEV 272



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 161/309 (52%), Gaps = 27/309 (8%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  LDL   +L  +P  +G L NL  L L  N+L ++P  + +  +L  
Sbjct: 37  DLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQT 96

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            N++   L++LP+ +                          Q  ++ +++  HNQ+  +P
Sbjct: 97  LNLDTNQLTTLPNEI-------------------------GQLINLQTLDLIHNQLVILP 131

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I ++ +NL  + + +N L  LP ++G    L  L+L TNQ+  L  +I  L NL+ L 
Sbjct: 132 KEI-NQLQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYTNQLKALPNEIGQLKNLQTLD 190

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           LS N+L  LP  IG L+ L+ L L  N+L++LP EIG L+ LQ L L  NQL +LP  IG
Sbjct: 191 LSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIG 250

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L +G+N L ++P+E+G L+NL  L L  N     IP E+    NL+ + L N 
Sbjct: 251 QLKNLYELYLGKNLLTTLPKEVGQLKNLKMLDLGYNQ-FKIIPNEIEQLQNLRTLRLRNN 309

Query: 553 PLSQIPSEI 561
             + +P EI
Sbjct: 310 QFTALPKEI 318



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/248 (35%), Positives = 137/248 (55%), Gaps = 1/248 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDL  + +  LP  + +L +L  L L  N+L  LP +IG + NL  L L  N L +
Sbjct: 116 NLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYTNQLKA 175

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP+ +  L+ L+ LDL  N L  LP  + +L +L+ LYL  N++KT+  +I  L NL  L
Sbjct: 176 LPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTL 235

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + DN++  LP E+G+LKNL  L L  N L  LPKE+G    L  LDL +N+   IP+ +
Sbjct: 236 HLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLKMLDLGYNQFKIIPNEI 295

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  LRL  N+  ++P+ + +  +L    +    L +LP+  +  L ++  + L+ 
Sbjct: 296 EQLQNLRTLRLRNNQFTALPKEIRQLQNLQVLFLNNNQLKTLPNE-IEKLQNLQVLDLND 354

Query: 342 NKFTAYPS 349
           N+    P+
Sbjct: 355 NQLKTLPN 362



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 161/316 (50%), Gaps = 26/316 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + +T LP  + +L +L+ L L  N+L  LP +I  + NL  LGL+ N L 
Sbjct: 92  KNLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLK 151

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  L+ L+ LDL  N+L  LP  + +L +L+ L L  N +  +  +I  L NL  
Sbjct: 152 ILPKEIGQLENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRE 211

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LP E+G+L+NL TL L+ N L  LP EIG    L  L L  N L  +P  
Sbjct: 212 LYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKE 271

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L YN+ + +P         NE               +  L ++  + L 
Sbjct: 272 VGQLKNLKMLDLGYNQFKIIP---------NE---------------IEQLQNLRTLRLR 307

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+FTA P     Q  ++  +   +NQ+  +P  I  + +NL  +++ DN L +LP ++ 
Sbjct: 308 NNQFTALPK-EIRQLQNLQVLFLNNNQLKTLPNEI-EKLQNLQVLDLNDNQLKTLPNEIE 365

Query: 401 TWVGLTELNLGTNQIS 416
               L  L+L  N++S
Sbjct: 366 KLQNLQVLDLRNNELS 381



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 124/212 (58%), Gaps = 5/212 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDLSK+ +T LP  + +L +L ELYL  N+L +LP +IG + NL  L L++N LT
Sbjct: 184 KNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLT 243

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  L+ L  L L  N L  LP  V +L +LK+L L +N+ K +  +I+ L NL  
Sbjct: 244 TLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLKMLDLGYNQFKIIPNEIEQLQNLRT 303

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +R+N+   LP E+ +L+NL  L L +N L+ LP EI     L  LDL  N+L  +P+ 
Sbjct: 304 LRLRNNQFTALPKEIRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPNE 363

Query: 281 LGNLINLTRLRLSYNRL-----ESVPETLSKC 307
           +  L NL  L L  N L     E + + L KC
Sbjct: 364 IEKLQNLQVLDLRNNELSSEEKERIRKLLPKC 395


>gi|312086059|ref|XP_003144928.1| Ras-binding protein SUR-8 [Loa loa]
          Length = 134

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 87/132 (65%), Positives = 112/132 (84%)

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L+ LDLEEN+L+++PNEIGF+  L +L +QSN+LV LPR IG+LTNL+ L  GEN L S+
Sbjct: 1   LRELDLEENELDAIPNEIGFVTSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENCLTSL 60

Query: 511 PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLII 570
           PEEIG L++L +LY+NDN  L+N+PFELALC++L+IMS++NCPLSQIP EI  GGPSL+I
Sbjct: 61  PEEIGNLDSLRSLYINDNPSLHNLPFELALCASLEIMSIENCPLSQIPPEITAGGPSLVI 120

Query: 571 RYLKMQGPYRTM 582
           +YLKMQGPYR M
Sbjct: 121 QYLKMQGPYRVM 132



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 1/108 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL ++ +  +P  +  +T L +L++  NKL  LP  IG +TNLT L   EN LTSLP+ 
Sbjct: 4   LDLEENELDAIPNEIGFVTSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENCLTSLPEE 63

Query: 166 LANLQQLRVLDLRHN-KLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
           + NL  LR L +  N  L+ LP  +    SL+I+ +    +  + P+I
Sbjct: 64  IGNLDSLRSLYINDNPSLHNLPFELALCASLEIMSIENCPLSQIPPEI 111



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           L EL L  N+L ++P++IG+VT+LT L +  N L  LP ++ NL  L  L    N L  L
Sbjct: 1   LRELDLEENELDAIPNEIGFVTSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENCLTSL 60

Query: 186 PMVVYKLTSLKILYLRFN-RIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           P  +  L SL+ LY+  N  +  +  ++   ++L ++S+ +  + ++PPE+
Sbjct: 61  PEEIGNLDSLRSLYINDNPSLHNLPFELALCASLEIMSIENCPLSQIPPEI 111



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 1/105 (0%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++  +P E+G + +L  L +  N L  LP+ IGN T L  L    N L ++P+ 
Sbjct: 4   LDLEENELDAIPNEIGFVTSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENCLTSLPEE 63

Query: 281 LGNLINLTRLRLSYN-RLESVPETLSKCVHLNEFNVEGCALSSLP 324
           +GNL +L  L ++ N  L ++P  L+ C  L   ++E C LS +P
Sbjct: 64  IGNLDSLRSLYINDNPSLHNLPFELALCASLEIMSIENCPLSQIP 108



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 1/108 (0%)

Query: 172 LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
           LR LDL  N+L+ +P  +  +TSL  L+++ N++  +   I  L+NL+ L   +N +  L
Sbjct: 1   LRELDLEENELDAIPNEIGFVTSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENCLTSL 60

Query: 232 PPELGELKNLVTLDLAHN-HLEELPKEIGNCTMLVTLDLQHNELVNIP 278
           P E+G L +L +L +  N  L  LP E+  C  L  + +++  L  IP
Sbjct: 61  PEEIGNLDSLRSLYINDNPSLHNLPFELALCASLEIMSIENCPLSQIP 108



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 1/111 (0%)

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           L ++++++N L ++P ++G    LT+L + +N++  L   I NL NL  L    N L  L
Sbjct: 1   LRELDLEENELDAIPNEIGFVTSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENCLTSL 60

Query: 442 PSSIGNLRKLKCLDLEEN-KLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
           P  IGNL  L+ L + +N  L +LP E+     L+ + +++  L  +P  I
Sbjct: 61  PEEIGNLDSLRSLYINDNPSLHNLPFELALCASLEIMSIENCPLSQIPPEI 111



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
           ++ E N++D IP  I     +L+K+ ++ N L  LP  +G    LT+L  G N ++ L E
Sbjct: 4   LDLEENELDAIPNEI-GFVTSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENCLTSLPE 62

Query: 421 DIQNLVNLEVLVLSNN-LLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           +I NL +L  L +++N  L  LP  +     L+ + +E   L  +P EI
Sbjct: 63  EIGNLDSLRSLYINDNPSLHNLPFELALCASLEIMSIENCPLSQIPPEI 111



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 2/70 (2%)

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD- 325
           LDL+ NEL  IP+ +G + +LT+L +  N+L  +P T+    +L +       L+SLP+ 
Sbjct: 4   LDLEENELDAIPNEIGFVTSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENCLTSLPEE 63

Query: 326 -GLLSSLTSI 334
            G L SL S+
Sbjct: 64  IGNLDSLRSL 73


>gi|291239871|ref|XP_002739845.1| PREDICTED: Lap1-like [Saccoglossus kowalevskii]
          Length = 1530

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 153/526 (29%), Positives = 262/526 (49%), Gaps = 54/526 (10%)

Query: 87  ADLNIEKEFLRCKEENILN-------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASL 139
            +L++ K  +RC   ++ N       L LS + I  +P S+ +L  L+EL +  NK++SL
Sbjct: 403 TELDVGKNMIRCISSDMSNKLDQLEKLVLSDNQIEEIPTSLYQLKSLKELDMRKNKISSL 462

Query: 140 PSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILY 199
            + I  + NL  L ++ N L  +P S+  L++L+ LD+R N L E+   + KL  L+IL 
Sbjct: 463 SADISKLENLEILNISGNILDEVPASVYQLRKLKKLDMRSNMLTEISSEISKLEWLEILV 522

Query: 200 LRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIG 259
           +  N+++ +   +  L NL  L +  NK++ + PE+ +L+ L TL ++ N+L+ +P  + 
Sbjct: 523 VSNNKLQDLPISVYKLGNLKKLEIEGNKLKYVSPEIFQLQKLETLIVSGNNLQGIPNALY 582

Query: 260 NCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA 319
           N   L  LD ++N++  +   +  L  L RL +S N L  +P ++ K   L E NV   A
Sbjct: 583 NLRKLKELDARNNKITYLSAEICQLKQLQRLVVSGNILHEIPTSICKLKKLKEINVRSNA 642

Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYP------------SGGPTQFTSV--------- 358
           L+SLP  + S LT +  + +S NK    P              G    +S+         
Sbjct: 643 LTSLPQEI-SQLTQLEVLIVSCNKLPNVPPVVYKLKGLKKLDIGNNIISSILPDIHELNQ 701

Query: 359 -YSINFEHNQIDKIPYGIF----------------------SRAKNLSKVNMKDNLLTSL 395
              +N  +NQ+  +   I+                      S+ + L  +++ DN L  L
Sbjct: 702 LQVLNVSYNQLQDVTPNIYRLRQLKRLDLQHNKITSPLPDVSKLQELEVLDISDNKLQEL 761

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P  L     + ELN+G+N+I  LS D+  L  L  + LS+N +  +P++I  L +L+ L+
Sbjct: 762 PPSLYQLKSMKELNVGSNEIISLSSDLSQLKQLRKINLSHNQMNAVPAAINQLSQLEDLN 821

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           +  N +  L   I  LK L++L +  NQ+  +P ++  L  L  L+V  NN+ ++PE I 
Sbjct: 822 MSNNNMTKLSG-ISHLKHLKKLNISFNQVQEVPFSLCKLHQLKVLNVASNNISTLPENIS 880

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L NL  L L  ++ L NIP  L   S L+++ + +  L +IP  +
Sbjct: 881 ELHNLEELNLK-SSSLQNIPSALGHLSKLKVLDIRDNHLGKIPKPV 925



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 147/488 (30%), Positives = 249/488 (51%), Gaps = 29/488 (5%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C+  N+  L L K++++ LP  +  L HL+ L +  NK  ++PS +  + +L  L +  N
Sbjct: 30  CRFTNLKALYLGKNNLSALPDKISTLQHLKILDISQNKFDNIPSCVLKLKSLKILDVEGN 89

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           S+TSLP  ++ L QL  L+   N++  +P  VYKL SL  L +  N I T+   I  L N
Sbjct: 90  SVTSLPPEISQLNQLEKLNASCNQIKTVPDAVYKLKSLTELNVGNNLITTLSYSISQLQN 149

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L +L + DN ++E+P  L  L  L  LD+  N++  +  EI     L TL +  N L  I
Sbjct: 150 LEILVVSDNNLQEVPNNLYHLNKLKLLDIRGNNISSIATEISKLKQLNTLIVSCNNLRKI 209

Query: 278 P------------DMLGNLI-----------NLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P            DM GN I            L  L +S N+L ++P  + +   L E +
Sbjct: 210 PNDVYQLRKLKKFDMRGNKITTVTSDISKLDQLEILIVSSNKLHTIPSDIYQLRKLRELD 269

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           V    +  LPD  +S L  +  + LS N     PS    + T +  +N + N I  I   
Sbjct: 270 VGSNDIRILPD--ISQLKKLEILNLSCNHLEKIPS-SIYKLTCLKELNVQSNSITSISTN 326

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           I S  ++L  +N+ +N L  +P  +     L +L++G N+I+ L  +I  L  L+ LV+S
Sbjct: 327 I-SELRSLEMLNVSNNKLHEIPPTVCKLKTLKKLDMGNNRITSLLPEIAQLNQLKSLVIS 385

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG-FLKELQRLILQSNQLVSLPRAIGH 493
            + L+++PSS+  L+ L  LD+ +N +  + +++   L +L++L+L  NQ+  +P ++  
Sbjct: 386 GHSLQEIPSSVYQLKMLTELDVGKNMIRCISSDMSNKLDQLEKLVLSDNQIEEIPTSLYQ 445

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L +L  L + +N + S+  +I  LENL  L ++ N  L+ +P  +     L+ + + +  
Sbjct: 446 LKSLKELDMRKNKISSLSADISKLENLEILNISGN-ILDEVPASVYQLRKLKKLDMRSNM 504

Query: 554 LSQIPSEI 561
           L++I SEI
Sbjct: 505 LTEISSEI 512



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 212/424 (50%), Gaps = 32/424 (7%)

Query: 127 EELYLYGNKLASLP-SQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           EE+ L G +++ +  +++   TNL  L L +N+L++LPD ++ LQ L++LD+  NK + +
Sbjct: 12  EEIDLRGKQISKISFTKLCRFTNLKALYLGKNNLSALPDKISTLQHLKILDISQNKFDNI 71

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  V KL SLKIL                        +  N +  LPPE+ +L  L  L+
Sbjct: 72  PSCVLKLKSLKIL-----------------------DVEGNSVTSLPPEISQLNQLEKLN 108

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
            + N ++ +P  +     L  L++ +N +  +   +  L NL  L +S N L+ VP  L 
Sbjct: 109 ASCNQIKTVPDAVYKLKSLTELNVGNNLITTLSYSISQLQNLEILVVSDNNLQEVPNNLY 168

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
               L   ++ G  +SS+    +S L  +N + +S N     P+    Q   +   +   
Sbjct: 169 HLNKLKLLDIRGNNISSIATE-ISKLKQLNTLIVSCNNLRKIPN-DVYQLRKLKKFDMRG 226

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           N+I  +   I S+   L  + +  N L ++P D+     L EL++G+N I ++  DI  L
Sbjct: 227 NKITTVTSDI-SKLDQLEILIVSSNKLHTIPSDIYQLRKLRELDVGSNDI-RILPDISQL 284

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
             LE+L LS N L+K+PSSI  L  LK L+++ N + S+   I  L+ L+ L + +N+L 
Sbjct: 285 KKLEILNLSCNHLEKIPSSIYKLTCLKELNVQSNSITSISTNISELRSLEMLNVSNNKLH 344

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP---FELALCS 542
            +P  +  L  L  L +G N + S+  EI  L  L +L ++ ++ L  IP   ++L + +
Sbjct: 345 EIPPTVCKLKTLKKLDMGNNRITSLLPEIAQLNQLKSLVISGHS-LQEIPSSVYQLKMLT 403

Query: 543 NLQI 546
            L +
Sbjct: 404 ELDV 407



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 184/349 (52%), Gaps = 6/349 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD   + IT+L   + +L  L+ L + GN L  +P+ I  +  L  + +  N+LTSLP  
Sbjct: 590 LDARNNKITYLSAEICQLKQLQRLVVSGNILHEIPTSICKLKKLKEINVRSNALTSLPQE 649

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           ++ L QL VL +  NKL  +P VVYKL  LK L +  N I ++ PDI  L+ L +L++  
Sbjct: 650 ISQLTQLEVLIVSCNKLPNVPPVVYKLKGLKKLDIGNNIISSILPDIHELNQLQVLNVSY 709

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+++++ P +  L+ L  LDL HN +     ++     L  LD+  N+L  +P  L  L 
Sbjct: 710 NQLQDVTPNIYRLRQLKRLDLQHNKITSPLPDVSKLQELEVLDISDNKLQELPPSLYQLK 769

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           ++  L +  N + S+   LS+   L + N+    ++++P   ++ L+ + ++ +S N  T
Sbjct: 770 SMKELNVGSNEIISLSSDLSQLKQLRKINLSHNQMNAVP-AAINQLSQLEDLNMSNNNMT 828

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                G +    +  +N   NQ+ ++P+ +  +   L  +N+  N +++LP ++     L
Sbjct: 829 KL--SGISHLKHLKKLNISFNQVQEVPFSL-CKLHQLKVLNVASNNISTLPENISELHNL 885

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
            ELNL ++ +  +   + +L  L+VL + +N L K+P  + NL   KCL
Sbjct: 886 EELNLKSSSLQNIPSALGHLSKLKVLDIRDNHLGKIPKPVQNLP--KCL 932



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 172/350 (49%), Gaps = 29/350 (8%)

Query: 213 QYLSNLSMLSMRDNKIRELP-PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
           +Y ++   + +R  +I ++   +L    NL  L L  N+L  LP +I     L  LD+  
Sbjct: 6   KYDASAEEIDLRGKQISKISFTKLCRFTNLKALYLGKNNLSALPDKISTLQHLKILDISQ 65

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           N+  NIP  +  L +L  L +  N + S+P  +S+   L + N     + ++PD +    
Sbjct: 66  NKFDNIPSCVLKLKSLKILDVEGNSVTSLPPEISQLNQLEKLNASCNQIKTVPDAVY--- 122

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
                                 +  S+  +N  +N I  + Y I S+ +NL  + + DN 
Sbjct: 123 ----------------------KLKSLTELNVGNNLITTLSYSI-SQLQNLEILVVSDNN 159

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           L  +P +L     L  L++  N IS ++ +I  L  L  L++S N L+K+P+ +  LRKL
Sbjct: 160 LQEVPNNLYHLNKLKLLDIRGNNISSIATEISKLKQLNTLIVSCNNLRKIPNDVYQLRKL 219

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           K  D+  NK+ ++ ++I  L +L+ LI+ SN+L ++P  I  L  L  L VG N+++ +P
Sbjct: 220 KKFDMRGNKITTVTSDISKLDQLEILIVSSNKLHTIPSDIYQLRKLRELDVGSNDIRILP 279

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            +I  L+ L  L L+ N  L  IP  +   + L+ +++ +  ++ I + I
Sbjct: 280 -DISQLKKLEILNLSCNH-LEKIPSSIYKLTCLKELNVQSNSITSISTNI 327



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 98/186 (52%), Gaps = 23/186 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD+S + +  LPPS+ +L  ++EL +  N++ SL S +  +  L  + L+ N + ++P +
Sbjct: 751 LDISDNKLQELPPSLYQLKSMKELNVGSNEIISLSSDLSQLKQLRKINLSHNQMNAVPAA 810

Query: 166 L----------------------ANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFN 203
           +                      ++L+ L+ L++  N++ E+P  + KL  LK+L +  N
Sbjct: 811 INQLSQLEDLNMSNNNMTKLSGISHLKHLKKLNISFNQVQEVPFSLCKLHQLKVLNVASN 870

Query: 204 RIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC-T 262
            I T+  +I  L NL  L+++ + ++ +P  LG L  L  LD+  NHL ++PK + N   
Sbjct: 871 NISTLPENISELHNLEELNLKSSSLQNIPSALGHLSKLKVLDIRDNHLGKIPKPVQNLPK 930

Query: 263 MLVTLD 268
            LV LD
Sbjct: 931 CLVKLD 936


>gi|410941458|ref|ZP_11373255.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410783407|gb|EKR72401.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 425

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 135/381 (35%), Positives = 203/381 (53%), Gaps = 26/381 (6%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L G+KLA+L  +IG + NL  L L  N LT+LP+ +  LQ L+VL+L  NKL  LP  
Sbjct: 53  LNLNGSKLATLSKEIGKLQNLQVLNLGFNQLTTLPNEVGQLQNLQVLNLYSNKLTILPKE 112

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + KL +L++L L FNR+  +  ++  L NL  L++  NK+  LP E+G+L+ L  LDL  
Sbjct: 113 IGKLRNLQVLNLGFNRLTILPDEVGQLQNLQELNLDLNKLTILPEEIGQLQKLQILDLEG 172

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L   PKEIG    L  L+L  N+L  + + +  L NL  L L  N L ++P+ + +  
Sbjct: 173 NQLTTFPKEIGKLQKLQVLNLGFNQLTTLREEVVQLQNLQILNLISNPLTTLPKEIGQLQ 232

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
            L E N+    L +LP G++                         Q  ++  +N  +  +
Sbjct: 233 KLQELNLYDIQLKTLPQGII-------------------------QLQNLRGLNLNYTHL 267

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
             +P  I   +K L K+ +  N LT+LP ++G    L EL LG N +  L ++I+ L  L
Sbjct: 268 TILPKEIGQLSK-LQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKL 326

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L L +N +   P  IG L+ L+ L+L  N+L +LP EIG L+ LQ L L+ NQL +LP
Sbjct: 327 QTLHLESNQITTFPKEIGQLQNLQELNLGFNQLTTLPKEIGQLQNLQELNLKFNQLATLP 386

Query: 489 RAIGHLTNLSYLSVGENNLQS 509
           + IG    L  L++  N + S
Sbjct: 387 KEIGQQQKLRKLNLYNNPIAS 407



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 131/368 (35%), Positives = 206/368 (55%), Gaps = 3/368 (0%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +L ++L N + +R+L+L  +KL  L   + KL +L++L L FN++ T+  ++  L NL +
Sbjct: 39  NLTEALQNPKDVRILNLNGSKLATLSKEIGKLQNLQVLNLGFNQLTTLPNEVGQLQNLQV 98

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  NK+  LP E+G+L+NL  L+L  N L  LP E+G    L  L+L  N+L  +P+ 
Sbjct: 99  LNLYSNKLTILPKEIGKLRNLQVLNLGFNRLTILPDEVGQLQNLQELNLDLNKLTILPEE 158

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L  L  L L  N+L + P+ + K   L   N+    L++L + ++  L ++  + L 
Sbjct: 159 IGQLQKLQILDLEGNQLTTFPKEIGKLQKLQVLNLGFNQLTTLREEVVQ-LQNLQILNLI 217

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N  T  P     Q   +  +N    Q+  +P GI  + +NL  +N+    LT LP ++G
Sbjct: 218 SNPLTTLPKE-IGQLQKLQELNLYDIQLKTLPQGII-QLQNLRGLNLNYTHLTILPKEIG 275

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L +L L  NQ++ L E+I  L  L+ L L NN L+ LP  I  L+KL+ L LE N+
Sbjct: 276 QLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLHLESNQ 335

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           + + P EIG L+ LQ L L  NQL +LP+ IG L NL  L++  N L ++P+EIG  + L
Sbjct: 336 ITTFPKEIGQLQNLQELNLGFNQLTTLPKEIGQLQNLQELNLKFNQLATLPKEIGQQQKL 395

Query: 521 HTLYLNDN 528
             L L +N
Sbjct: 396 RKLNLYNN 403



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 130/368 (35%), Positives = 191/368 (51%), Gaps = 27/368 (7%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
            ++IL L  +++ T+  +I  L NL +L++  N++  LP E+G+L+NL  L+L  N L  
Sbjct: 49  DVRILNLNGSKLATLSKEIGKLQNLQVLNLGFNQLTTLPNEVGQLQNLQVLNLYSNKLTI 108

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LPKEIG    L  L+L  N L  +PD +G L NL  L L  N+L  +PE + +   L   
Sbjct: 109 LPKEIGKLRNLQVLNLGFNRLTILPDEVGQLQNLQELNLDLNKLTILPEEIGQLQKLQIL 168

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           ++EG  L++ P  +                       G  Q   V ++ F  NQ+  +  
Sbjct: 169 DLEGNQLTTFPKEI-----------------------GKLQKLQVLNLGF--NQLTTLRE 203

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
            +  + +NL  +N+  N LT+LP ++G    L ELNL   Q+  L + I  L NL  L L
Sbjct: 204 EVV-QLQNLQILNLISNPLTTLPKEIGQLQKLQELNLYDIQLKTLPQGIIQLQNLRGLNL 262

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           +   L  LP  IG L KL+ L L  N+L +LP EIG LK+LQ L L +N L +LP+ I  
Sbjct: 263 NYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQ 322

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L  L  L +  N + + P+EIG L+NL  L L  N  L  +P E+    NLQ ++L    
Sbjct: 323 LQKLQTLHLESNQITTFPKEIGQLQNLQELNLGFNQ-LTTLPKEIGQLQNLQELNLKFNQ 381

Query: 554 LSQIPSEI 561
           L+ +P EI
Sbjct: 382 LATLPKEI 389



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/358 (34%), Positives = 189/358 (52%), Gaps = 7/358 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L+L  + +T LP  V +L +L+ L LY NKL  LP +IG + NL  L L  N 
Sbjct: 69  KLQNLQVLNLGFNQLTTLPNEVGQLQNLQVLNLYSNKLTILPKEIGKLRNLQVLNLGFNR 128

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT LPD +  LQ L+ L+L  NKL  LP  + +L  L+IL L  N++ T   +I  L  L
Sbjct: 129 LTILPDEVGQLQNLQELNLDLNKLTILPEEIGQLQKLQILDLEGNQLTTFPKEIGKLQKL 188

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            +L++  N++  L  E+ +L+NL  L+L  N L  LPKEIG    L  L+L   +L  +P
Sbjct: 189 QVLNLGFNQLTTLREEVVQLQNLQILNLISNPLTTLPKEIGQLQKLQELNLYDIQLKTLP 248

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +  L NL  L L+Y  L  +P+ + +   L +  + G  L++LP+  +  L  +  + 
Sbjct: 249 QGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEE-IGQLKKLQELY 307

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           L  N     P     Q   + +++ E NQI   P  I  + +NL ++N+  N LT+LP +
Sbjct: 308 LGNNPLRTLPK-EIEQLQKLQTLHLESNQITTFPKEI-GQLQNLQELNLGFNQLTTLPKE 365

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL--KCL 454
           +G    L ELNL  NQ++ L ++I     L  L L NN +      I  +RKL  KC+
Sbjct: 366 IGQLQNLQELNLKFNQLATLPKEIGQQQKLRKLNLYNNPIAS--EKIERIRKLLPKCI 421



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 110/187 (58%), Gaps = 1/187 (0%)

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             + +NL  +N+  N LT+LP ++G    L  LNL +N+++ L ++I  L NL+VL L  
Sbjct: 67  IGKLQNLQVLNLGFNQLTTLPNEVGQLQNLQVLNLYSNKLTILPKEIGKLRNLQVLNLGF 126

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N L  LP  +G L+ L+ L+L+ NKL  LP EIG L++LQ L L+ NQL + P+ IG L 
Sbjct: 127 NRLTILPDEVGQLQNLQELNLDLNKLTILPEEIGQLQKLQILDLEGNQLTTFPKEIGKLQ 186

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            L  L++G N L ++ EE+  L+NL  L L  N  L  +P E+     LQ ++L +  L 
Sbjct: 187 KLQVLNLGFNQLTTLREEVVQLQNLQILNLISNP-LTTLPKEIGQLQKLQELNLYDIQLK 245

Query: 556 QIPSEIV 562
            +P  I+
Sbjct: 246 TLPQGII 252


>gi|291236280|ref|XP_002738068.1| PREDICTED: leucine rich repeat containing 40-like [Saccoglossus
           kowalevskii]
          Length = 1970

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/539 (27%), Positives = 254/539 (47%), Gaps = 86/539 (15%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +DL+  +I  LP  + + T ++ + L+ N L+ LP +   +  L  L L+ N   S+P  
Sbjct: 14  IDLNGCNINALPEDIARYTRVKSIDLHDNALSELPDKFADLKTLQKLNLSFNDFRSMPTP 73

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + +LQQL  L +  N L E+P  +Y +T+L  L L  N+I+ + P I  L NL   +++D
Sbjct: 74  IIHLQQLTSLSVNINDLAEIPTELYNITALTELSLFKNKIQEISPGISKLKNLIKFNIKD 133

Query: 226 NKIRELPPELGELKNL-----------------------VTLDLAHNHLEELPKEIGNCT 262
           N + E+P E+G+LK+L                          D++ NH+  +P EIG  T
Sbjct: 134 NMVTEIPAEIGKLKHLEEIDISKNQVTQIPKSVDGLVHLAKFDISQNHVSVIPGEIGCLT 193

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L   ++ +N++ +IP  +G L  L R  +++NRL S+P  +   + L E ++ G  L  
Sbjct: 194 QLQIFNISNNQVKDIPPTIGRLQMLHRFDIAHNRLTSLPRDIKSMIELKELSLTGNNLKD 253

Query: 323 LPDGLLSS----------------LTSIN----NITLSRNKFTAYPSGGPTQFTSVYSIN 362
           +P  +                   +  I+    +I L     T  PS    Q+T+V ++N
Sbjct: 254 IPRHIYEKGIVEIRQYWETEEVELMKDIDVLSEDIKLGSRSLTYLPS-MIGQYTNVKALN 312

Query: 363 FEHNQIDKIPYGI----------------------FSRAKNLSKVNMKDNLLTSLPLDL- 399
             +N +  +P  +                        + +N+ K+NM++N+LT  P D+ 
Sbjct: 313 ISNNSLMSLPMELAKLQQLEELNLSDNHFQQIPVHVCKIQNIQKLNMRNNMLTQFPNDID 372

Query: 400 --------GTWVG---------LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
                   G  +          L +L++  N+++K+ + I  L  LE   LSNN +  + 
Sbjct: 373 NLKQLDLSGNSISVIPDSCQYPLAKLDISDNKLTKVPKSISQLHELEEFNLSNNAIYHVS 432

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
             IG L +L  LD+  NKLE LP +   L  L +L L  N+L  +   I  L NL  L +
Sbjct: 433 PFIGELNQLLILDIHNNKLEELPLDFWNLTSLNKLDLHENKLNEISERISQLQNLRELDL 492

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             NNL  +P     L  +H+L ++DN  + +IP ++   ++LQ ++L    +++IPS +
Sbjct: 493 SRNNLSVVPSGC-FLPQIHSLDISDNAVI-DIPSDIGQMTSLQNLNLSGNRITEIPSTV 549



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 143/509 (28%), Positives = 246/509 (48%), Gaps = 42/509 (8%)

Query: 106  LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
            LD+S + IT +P +  KL  L EL L GN++ ++PS I  +  LT   +  N L+ LP  
Sbjct: 925  LDISHNQITEIPDTFGKLKTLNELDLSGNQIRTIPSSISQLQQLTKFAIRRNQLSELPKC 984

Query: 166  LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
            + +LQ L+ LD+  N++  +P  +  L  L  L L  N++ ++ P+I  L  L  L  R+
Sbjct: 985  IGDLQLLQQLDISGNQITMVPETIGVLKELTKLELGDNQLTSMTPNIGLLCKLEELHARN 1044

Query: 226  NKIRELPPELGELKNLVTLDLAHNHLEELP-KEIGNCTMLV------------------- 265
            NK+  +P E+  +  L T+ L  N +E+ P  E  N   L+                   
Sbjct: 1045 NKLTSIPREIKRITTLRTISLRGNEIEDPPINECENYFQLLSNYWDEQELRILEPFDVST 1104

Query: 266  -TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
             T+ L   +L  +P ++    NL  L L  N+L S+P  +S+   L + N+    LS +P
Sbjct: 1105 RTIRLDGAQLTYVPLLIHRYTNLIELDLQNNKLHSLPLEISRLNMLEKINLSNNLLSDVP 1164

Query: 325  DGLLSSLTSINNITLSRNKFTAYPSGG----------------PTQFTSVYSIN---FEH 365
            D ++S+L  ++ + L  N    +P                   PT   ++Y +N      
Sbjct: 1165 D-IISTLPKMSTLVLRNNNINEFPCSIVSLKELDISNNNIQIIPTDIHTLYQLNRLDVSS 1223

Query: 366  NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
            N + ++P  ++ +   L ++N+ DN + S+  D+ +   L   ++  N+++++ ++I NL
Sbjct: 1224 NSLRELPDTLY-KVTTLVQLNLSDNQIVSISTDIRSLTNLKVFDISKNKLTEIPDEIGNL 1282

Query: 426  VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
            V LE L LS+N ++ +PSSI  L  L  L++  N +  +P+ I  L +LQRL L  NQ+ 
Sbjct: 1283 VALERLYLSSNTIQIIPSSIARLTNLSELNISNNIISCIPDGIYALTKLQRLNLMRNQIK 1342

Query: 486  SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
             L  ++G +  L  L +  N+L  IP  I  L+ L  L L  N  L ++P  +   +NL 
Sbjct: 1343 DLSESVGKMVELVVLDISHNDLSIIPLSIKNLQMLEILDLQGNAKLTSLPIGIIRLTNLN 1402

Query: 546  IMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
               L+   +   P  + + G   I  Y +
Sbjct: 1403 QCGLEGTTMETPPMNVCLAGICSIREYFE 1431



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 251/520 (48%), Gaps = 66/520 (12%)

Query: 105  NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
            +LD+S + I  +P +V +L  L  L  + N L  +P ++  +TNL  L L++N L+ LPD
Sbjct: 809  DLDISDNKIDEIPSTVSELHSLTNLNAHANNLNVVPVELCTLTNLCYLDLSKNHLSCLPD 868

Query: 165  SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
               NL+QLR L ++ N+L  LP  ++KL  L++L    N I  +  +   LS L ML + 
Sbjct: 869  DFCNLRQLRQLYIQENELECLPADMHKLDGLQLLQASQNCITEISNNTCILSELEMLDIS 928

Query: 225  DNKIRELPPELGELKNLVTLDLA-----------------------HNHLEELPKEIGNC 261
             N+I E+P   G+LK L  LDL+                        N L ELPK IG+ 
Sbjct: 929  HNQITEIPDTFGKLKTLNELDLSGNQIRTIPSSISQLQQLTKFAIRRNQLSELPKCIGDL 988

Query: 262  TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             +L  LD+  N++  +P+ +G L  LT+L L  N+L S+   +     L E +     L+
Sbjct: 989  QLLQQLDISGNQITMVPETIGVLKELTKLELGDNQLTSMTPNIGLLCKLEELHARNNKLT 1048

Query: 322  SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF--------------------TSVYSI 361
            S+P   +  +T++  I+L  N+    P      +                     S  +I
Sbjct: 1049 SIPRE-IKRITTLRTISLRGNEIEDPPINECENYFQLLSNYWDEQELRILEPFDVSTRTI 1107

Query: 362  NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
              +  Q+  +P  +  R  NL ++++++N L SLPL++     L ++NL  N +S + + 
Sbjct: 1108 RLDGAQLTYVPL-LIHRYTNLIELDLQNNKLHSLPLEISRLNMLEKINLSNNLLSDVPDI 1166

Query: 422  IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC--------------------LDLEENKL 461
            I  L  +  LVL NN + + P SI +L++L                      LD+  N L
Sbjct: 1167 ISTLPKMSTLVLRNNNINEFPCSIVSLKELDISNNNIQIIPTDIHTLYQLNRLDVSSNSL 1226

Query: 462  ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
              LP+ +  +  L +L L  NQ+VS+   I  LTNL    + +N L  IP+EIG L  L 
Sbjct: 1227 RELPDTLYKVTTLVQLNLSDNQIVSISTDIRSLTNLKVFDISKNKLTEIPDEIGNLVALE 1286

Query: 522  TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             LYL+ NT +  IP  +A  +NL  +++ N  +S IP  I
Sbjct: 1287 RLYLSSNT-IQIIPSSIARLTNLSELNISNNIISCIPDGI 1325



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 232/506 (45%), Gaps = 91/506 (17%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +D+SK+ +T +P SV+ L HL +  +  N ++ +P +IG +T L    ++ N +  +P +
Sbjct: 152 IDISKNQVTQIPKSVDGLVHLAKFDISQNHVSVIPGEIGCLTQLQIFNISNNQVKDIPPT 211

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV----------------- 208
           +  LQ L   D+ HN+L  LP  +  +  LK L L  N +K +                 
Sbjct: 212 IGRLQMLHRFDIAHNRLTSLPRDIKSMIELKELSLTGNNLKDIPRHIYEKGIVEIRQYWE 271

Query: 209 ------HPDIQYLS---------------------NLSMLSMRDNKIRELPPELGELKNL 241
                   DI  LS                     N+  L++ +N +  LP EL +L+ L
Sbjct: 272 TEEVELMKDIDVLSEDIKLGSRSLTYLPSMIGQYTNVKALNISNNSLMSLPMELAKLQQL 331

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP---------DMLGNLIN------ 286
             L+L+ NH +++P  +     +  L++++N L   P         D+ GN I+      
Sbjct: 332 EELNLSDNHFQQIPVHVCKIQNIQKLNMRNNMLTQFPNDIDNLKQLDLSGNSISVIPDSC 391

Query: 287 ---LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA-----------------------L 320
              L +L +S N+L  VP+++S+   L EFN+   A                       L
Sbjct: 392 QYPLAKLDISDNKLTKVPKSISQLHELEEFNLSNNAIYHVSPFIGELNQLLILDIHNNKL 451

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
             LP    + LTS+N + L  NK     S   +Q  ++  ++   N +  +P G F    
Sbjct: 452 EELPLDFWN-LTSLNKLDLHENKLNEI-SERISQLQNLRELDLSRNNLSVVPSGCF--LP 507

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
            +  +++ DN +  +P D+G    L  LNL  N+I+++   + +L  L  L L  N + K
Sbjct: 508 QIHSLDISDNAVIDIPSDIGQMTSLQNLNLSGNRITEIPSTVCDLYQLSHLNLKKNKIPK 567

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           LP +IG L  L   D+ +N ++ +P+ +G L +L + I+ +N+L +LPRA+  L NL+ L
Sbjct: 568 LPLNIGRLHNLLSFDVSDNTIDEIPSTVGNLGKLTKFIISNNELDTLPRAMHKLVNLNDL 627

Query: 501 SVGENNLQSIPEEIGT--LENLHTLY 524
            +  N +    E++    L+ LH  +
Sbjct: 628 QIHGNPITEPTEDVCKQGLDALHFYW 653



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 239/495 (48%), Gaps = 55/495 (11%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
            +LS ++I H+ P + +L  L  L ++ NKL  LP     +T+L  L L EN L  + + 
Sbjct: 421 FNLSNNAIYHVSPFIGELNQLLILDIHNNKLEELPLDFWNLTSLNKLDLHENKLNEISER 480

Query: 166 LANLQQLRVLDLRHNKLN----------------------ELPMVVYKLTSLKILYLRFN 203
           ++ LQ LR LDL  N L+                      ++P  + ++TSL+ L L  N
Sbjct: 481 ISQLQNLRELDLSRNNLSVVPSGCFLPQIHSLDISDNAVIDIPSDIGQMTSLQNLNLSGN 540

Query: 204 RIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTM 263
           RI  +   +  L  LS L+++ NKI +LP  +G L NL++ D++ N ++E+P  +GN   
Sbjct: 541 RITEIPSTVCDLYQLSHLNLKKNKIPKLPLNIGRLHNLLSFDVSDNTIDEIPSTVGNLGK 600

Query: 264 LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK----CVHL--------- 310
           L    + +NEL  +P  +  L+NL  L++  N +    E + K     +H          
Sbjct: 601 LTKFIISNNELDTLPRAMHKLVNLNDLQIHGNPITEPTEDVCKQGLDALHFYWEELDKID 660

Query: 311 ------------NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
                       +E  +    ++ +P  ++   T +  +  S N+   +P    +Q   +
Sbjct: 661 RDLLKDFDRSTTDEITITQRDMTYIP-PMIDEYTDLKKLDFSANRIATFPVEL-SQLNKL 718

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
             ++   N   +IP  IF   K L  +++ +N LT  P ++G    +  L+L  N+I++ 
Sbjct: 719 EELDLSDNIFQEIPVSIFQLGK-LKILHLSNNKLTIFPTNIG---NVKNLDLSANKITEF 774

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
           S    N  NL  L +SNN+L +LP  +  L  L+ LD+ +NK++ +P+ +  L  L  L 
Sbjct: 775 SCPFPNFSNLSRLNVSNNILTQLPEDLTGLSSLEDLDISDNKIDEIPSTVSELHSLTNLN 834

Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFEL 538
             +N L  +P  +  LTNL YL + +N+L  +P++   L  L  LY+ +N  L  +P ++
Sbjct: 835 AHANNLNVVPVELCTLTNLCYLDLSKNHLSCLPDDFCNLRQLRQLYIQENE-LECLPADM 893

Query: 539 ALCSNLQIM-SLDNC 552
                LQ++ +  NC
Sbjct: 894 HKLDGLQLLQASQNC 908



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 144/557 (25%), Positives = 247/557 (44%), Gaps = 99/557 (17%)

Query: 98   CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS---------------- 141
            C    I +LD+S +++  +P  + ++T L+ L L GN++  +PS                
Sbjct: 504  CFLPQIHSLDISDNAVIDIPSDIGQMTSLQNLNLSGNRITEIPSTVCDLYQLSHLNLKKN 563

Query: 142  -------QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
                    IG + NL    +++N++  +P ++ NL +L    + +N+L+ LP  ++KL +
Sbjct: 564  KIPKLPLNIGRLHNLLSFDVSDNTIDEIPSTVGNLGKLTKFIISNNELDTLPRAMHKLVN 623

Query: 195  LKILYLR------------------------------------FNR-----IKTVHPDIQ 213
            L  L +                                     F+R     I     D+ 
Sbjct: 624  LNDLQIHGNPITEPTEDVCKQGLDALHFYWEELDKIDRDLLKDFDRSTTDEITITQRDMT 683

Query: 214  YL-------SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
            Y+       ++L  L    N+I   P EL +L  L  LDL+ N  +E+P  I     L  
Sbjct: 684  YIPPMIDEYTDLKKLDFSANRIATFPVELSQLNKLEELDLSDNIFQEIPVSIFQLGKLKI 743

Query: 267  LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
            L L +N+L   P  +GN+ NL    LS N++           +L+  NV    L+ LP+ 
Sbjct: 744  LHLSNNKLTIFPTNIGNVKNLD---LSANKITEFSCPFPNFSNLSRLNVSNNILTQLPED 800

Query: 327  LLSSLTSINNITLSRNKFTAYPSG-------------------GPTQ---FTSVYSINFE 364
             L+ L+S+ ++ +S NK    PS                     P +    T++  ++  
Sbjct: 801  -LTGLSSLEDLDISDNKIDEIPSTVSELHSLTNLNAHANNLNVVPVELCTLTNLCYLDLS 859

Query: 365  HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN 424
             N +  +P   F   + L ++ +++N L  LP D+    GL  L    N I+++S +   
Sbjct: 860  KNHLSCLPDD-FCNLRQLRQLYIQENELECLPADMHKLDGLQLLQASQNCITEISNNTCI 918

Query: 425  LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
            L  LE+L +S+N + ++P + G L+ L  LDL  N++ ++P+ I  L++L +  ++ NQL
Sbjct: 919  LSELEMLDISHNQITEIPDTFGKLKTLNELDLSGNQIRTIPSSISQLQQLTKFAIRRNQL 978

Query: 485  VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
              LP+ IG L  L  L +  N +  +PE IG L+ L  L L DN   +  P  + L   L
Sbjct: 979  SELPKCIGDLQLLQQLDISGNQITMVPETIGVLKELTKLELGDNQLTSMTP-NIGLLCKL 1037

Query: 545  QIMSLDNCPLSQIPSEI 561
            + +   N  L+ IP EI
Sbjct: 1038 EELHARNNKLTSIPREI 1054



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 232/486 (47%), Gaps = 61/486 (12%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           CK +NI  L++  + +T  P  ++ L  L+   L GN ++ +P    Y   L  L +++N
Sbjct: 349 CKIQNIQKLNMRNNMLTQFPNDIDNLKQLD---LSGNSISVIPDSCQY--PLAKLDISDN 403

Query: 158 SLTSLPDSLANLQ-----------------------QLRVLDLRHNKLNELPMVVYKLTS 194
            LT +P S++ L                        QL +LD+ +NKL ELP+  + LTS
Sbjct: 404 KLTKVPKSISQLHELEEFNLSNNAIYHVSPFIGELNQLLILDIHNNKLEELPLDFWNLTS 463

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLS----------------------MLSMRDNKIRELP 232
           L  L L  N++  +   I  L NL                        L + DN + ++P
Sbjct: 464 LNKLDLHENKLNEISERISQLQNLRELDLSRNNLSVVPSGCFLPQIHSLDISDNAVIDIP 523

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            ++G++ +L  L+L+ N + E+P  + +   L  L+L+ N++  +P  +G L NL    +
Sbjct: 524 SDIGQMTSLQNLNLSGNRITEIPSTVCDLYQLSHLNLKKNKIPKLPLNIGRLHNLLSFDV 583

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           S N ++ +P T+     L +F +    L +LP   +  L ++N++ +  N  T       
Sbjct: 584 SDNTIDEIPSTVGNLGKLTKFIISNNELDTLPRA-MHKLVNLNDLQIHGNPITEPTEDVC 642

Query: 353 TQFTSVYSINFEHNQIDKIPYGI---FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
            Q   + +++F   ++DKI   +   F R+    ++ +    +T +P  +  +  L +L+
Sbjct: 643 KQ--GLDALHFYWEELDKIDRDLLKDFDRSTT-DEITITQRDMTYIPPMIDEYTDLKKLD 699

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
              N+I+    ++  L  LE L LS+N+ +++P SI  L KLK L L  NKL   P  IG
Sbjct: 700 FSANRIATFPVELSQLNKLEELDLSDNIFQEIPVSIFQLGKLKILHLSNNKLTIFPTNIG 759

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            +K L    L +N++        + +NLS L+V  N L  +PE++  L +L  L ++DN 
Sbjct: 760 NVKNLD---LSANKITEFSCPFPNFSNLSRLNVSNNILTQLPEDLTGLSSLEDLDISDNK 816

Query: 530 CLNNIP 535
            ++ IP
Sbjct: 817 -IDEIP 821



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 127/502 (25%), Positives = 241/502 (48%), Gaps = 50/502 (9%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N++  ++  + +T +P  + KL HLEE+ +  N++  +P  +  + +L    +++N 
Sbjct: 122 KLKNLIKFNIKDNMVTEIPAEIGKLKHLEEIDISKNQVTQIPKSVDGLVHLAKFDISQNH 181

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           ++ +P  +  L QL++ ++ +N++ ++P  + +L  L    +  NR+ ++  DI+ +  L
Sbjct: 182 VSVIPGEIGCLTQLQIFNISNNQVKDIPPTIGRLQMLHRFDIAHNRLTSLPRDIKSMIEL 241

Query: 219 SMLSMRDNKIRELPPELGE-----------------LKNLVTLD----LAHNHLEELPKE 257
             LS+  N ++++P  + E                 +K++  L     L    L  LP  
Sbjct: 242 KELSLTGNNLKDIPRHIYEKGIVEIRQYWETEEVELMKDIDVLSEDIKLGSRSLTYLPSM 301

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE- 316
           IG  T +  L++ +N L+++P  L  L  L  L LS N  + +P  + K  ++ + N+  
Sbjct: 302 IGQYTNVKALNISNNSLMSLPMELAKLQQLEELNLSDNHFQQIPVHVCKIQNIQKLNMRN 361

Query: 317 -------------------GCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
                              G ++S +PD     L  ++   +S NK T  P    +Q   
Sbjct: 362 NMLTQFPNDIDNLKQLDLSGNSISVIPDSCQYPLAKLD---ISDNKLTKVPK-SISQLHE 417

Query: 358 VYSINFEHNQIDKI-PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS 416
           +   N  +N I  + P+        L  +++ +N L  LPLD      L +L+L  N+++
Sbjct: 418 LEEFNLSNNAIYHVSPF--IGELNQLLILDIHNNKLEELPLDFWNLTSLNKLDLHENKLN 475

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
           ++SE I  L NL  L LS N L  +PS    L ++  LD+ +N +  +P++IG +  LQ 
Sbjct: 476 EISERISQLQNLRELDLSRNNLSVVPSGCF-LPQIHSLDISDNAVIDIPSDIGQMTSLQN 534

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
           L L  N++  +P  +  L  LS+L++ +N +  +P  IG L NL +  ++DNT ++ IP 
Sbjct: 535 LNLSGNRITEIPSTVCDLYQLSHLNLKKNKIPKLPLNIGRLHNLLSFDVSDNT-IDEIPS 593

Query: 537 ELALCSNLQIMSLDNCPLSQIP 558
            +     L    + N  L  +P
Sbjct: 594 TVGNLGKLTKFIISNNELDTLP 615



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 172/363 (47%), Gaps = 48/363 (13%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            +DL   ++  LP++I   T + ++DL  N L  +PD   +L  L +L LS+N   S+P 
Sbjct: 13  VIDLNGCNINALPEDIARYTRVKSIDLHDNALSELPDKFADLKTLQKLNLSFNDFRSMPT 72

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            +     L   +V    L+ +P  L  ++T++  ++L +NK     S G ++  ++   N
Sbjct: 73  PIIHLQQLTSLSVNINDLAEIPTELY-NITALTELSLFKNKIQEI-SPGISKLKNLIKFN 130

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            + N + +IP  I  + K+L ++++  N +T +P  +   V L + ++  N +S +  +I
Sbjct: 131 IKDNMVTEIPAEI-GKLKHLEEIDISKNQVTQIPKSVDGLVHLAKFDISQNHVSVIPGEI 189

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L  L++  +SNN +K +P +IG L+ L   D+  N+L SLP +I  + EL+ L L  N
Sbjct: 190 GCLTQLQIFNISNNQVKDIPPTIGRLQMLHRFDIAHNRLTSLPRDIKSMIELKELSLTGN 249

Query: 483 QLVSLPR--------------------------------------------AIGHLTNLS 498
            L  +PR                                             IG  TN+ 
Sbjct: 250 NLKDIPRHIYEKGIVEIRQYWETEEVELMKDIDVLSEDIKLGSRSLTYLPSMIGQYTNVK 309

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L++  N+L S+P E+  L+ L  L L+DN     IP  +    N+Q +++ N  L+Q P
Sbjct: 310 ALNISNNSLMSLPMELAKLQQLEELNLSDNH-FQQIPVHVCKIQNIQKLNMRNNMLTQFP 368

Query: 559 SEI 561
           ++I
Sbjct: 369 NDI 371



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 122/228 (53%), Gaps = 1/228 (0%)

Query: 98   CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            C   ++  LD+S ++I  +P  +  L  L  L +  N L  LP  +  VT L  L L++N
Sbjct: 1188 CSIVSLKELDISNNNIQIIPTDIHTLYQLNRLDVSSNSLRELPDTLYKVTTLVQLNLSDN 1247

Query: 158  SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
             + S+   + +L  L+V D+  NKL E+P  +  L +L+ LYL  N I+ +   I  L+N
Sbjct: 1248 QIVSISTDIRSLTNLKVFDISKNKLTEIPDEIGNLVALERLYLSSNTIQIIPSSIARLTN 1307

Query: 218  LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
            LS L++ +N I  +P  +  L  L  L+L  N +++L + +G    LV LD+ HN+L  I
Sbjct: 1308 LSELNISNNIISCIPDGIYALTKLQRLNLMRNQIKDLSESVGKMVELVVLDISHNDLSII 1367

Query: 278  PDMLGNLINLTRLRLSYN-RLESVPETLSKCVHLNEFNVEGCALSSLP 324
            P  + NL  L  L L  N +L S+P  + +  +LN+  +EG  + + P
Sbjct: 1368 PLSIKNLQMLEILDLQGNAKLTSLPIGIIRLTNLNQCGLEGTTMETPP 1415


>gi|301780096|ref|XP_002925464.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387-like [Ailuropoda melanoleuca]
          Length = 869

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 246/479 (51%), Gaps = 30/479 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++S + I+H+   + +L ++ +L+   N + + PS +  + NL  L LA+N L  +PD+
Sbjct: 225 LNVSHNQISHIAKEISQLGNIRQLFFNNNYIENFPSGLESLGNLEILSLAKNKLRHIPDT 284

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV----------------H 209
           L++L+ L+VLDL +N+L   P V+  L  L  L L  N I ++                H
Sbjct: 285 LSSLKNLKVLDLEYNQLTIFPKVLCFLPKLISLILTGNLISSLPKEIRELKNLEKLLLDH 344

Query: 210 PDIQYLS-------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
             + +L+        +  L + DNK++ +  ++   K L  L L  N L+E+P++I +C 
Sbjct: 345 NKLTFLAVEIFQLLKMKELQLTDNKLQVISHKIENFKELKILILDKNLLKEIPEKISHCV 404

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           ML  L L +N+L  +P  +  L NL +L ++ N +  +PE +S+  ++      G  ++ 
Sbjct: 405 MLECLSLSYNKLTGLPKNIYKLKNLRKLHVNRNNIVRIPEDISRLNNMFILEFSGNIITD 464

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P   + +   I  + LS NK   +P  G     S+Y +NF  N I +IP  I S +K L
Sbjct: 465 VPIE-VKNCKKITKVELSHNKIMYFPV-GLCALDSLYYLNFNGNYISEIPVDI-SFSKQL 521

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + +  N L      L + + L  L+LG NQI K+   I N+V+L  L+L  N  +  P
Sbjct: 522 LNLELNKNKLLIFSEHLCSLINLEYLDLGENQIRKIPPSISNMVSLHALILCCNKFEAFP 581

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
             +  L  L+ LDL  N+++++P++I  LK +Q+L + SNQ +  P  +  L +L  L++
Sbjct: 582 IEVCTLENLQVLDLSINQIQTIPSDICNLKRIQKLNIASNQFIYFPTELCQLQSLEELNI 641

Query: 503 GENN---LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            + N   L  +PEE+  +  L  L +++N  +  IP  +    +L  ++  N  +S +P
Sbjct: 642 SQINGRKLTRLPEELSNMTQLKRLDISNNA-IREIPRNIGELRSLVSLNAHNNQISYLP 699



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 210/416 (50%), Gaps = 10/416 (2%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           +T L   + +L  ++EL L  NKL  +  +I     L  L L +N L  +P+ +++   L
Sbjct: 347 LTFLAVEIFQLLKMKELQLTDNKLQVISHKIENFKELKILILDKNLLKEIPEKISHCVML 406

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
             L L +NKL  LP  +YKL +L+ L++  N I  +  DI  L+N+ +L    N I ++P
Sbjct: 407 ECLSLSYNKLTGLPKNIYKLKNLRKLHVNRNNIVRIPEDISRLNNMFILEFSGNIITDVP 466

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTM--LVTLDLQHNELVNIPDMLGNLINLTRL 290
            E+   K +  ++L+HN +   P  +G C +  L  L+   N +  IP  +     L  L
Sbjct: 467 IEVKNCKKITKVELSHNKIMYFP--VGLCALDSLYYLNFNGNYISEIPVDISFSKQLLNL 524

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+ N+L    E L   ++L   ++    +  +P  + S++ S++ + L  NKF A+P  
Sbjct: 525 ELNKNKLLIFSEHLCSLINLEYLDLGENQIRKIPPSI-SNMVSLHALILCCNKFEAFPIE 583

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
             T   ++  ++   NQI  IP  I    K + K+N+  N     P +L     L ELN+
Sbjct: 584 VCT-LENLQVLDLSINQIQTIPSDI-CNLKRIQKLNIASNQFIYFPTELCQLQSLEELNI 641

Query: 411 GT---NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
                 ++++L E++ N+  L+ L +SNN ++++P +IG LR L  L+   N++  LP  
Sbjct: 642 SQINGRKLTRLPEELSNMTQLKRLDISNNAIREIPRNIGELRSLVSLNAHNNQISYLPPS 701

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
              L +LQ+L L  N L  LP  I +L +L  ++  +N L   P EI   + L+T+
Sbjct: 702 FLCLNDLQQLNLSGNNLTVLPNGIHNLFSLKEINFDDNPLLRPPMEICKGKQLYTI 757



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 191/392 (48%), Gaps = 34/392 (8%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH-PDIQYLSNLSMLSMRDNKIRELP 232
            ++++   L E P  + K+  +K LYL  N+IK+    D   L  L +LS+++N +  LP
Sbjct: 154 TVNIKAKGLQEFPKDILKIKYVKYLYLDKNQIKSFKGADSGDLLGLEILSLQENGLSSLP 213

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
           PE+  L+NL  L+++HN +  + KEI     +  L   +N + N P  L +L NL  L L
Sbjct: 214 PEIQLLRNLRILNVSHNQISHIAKEISQLGNIRQLFFNNNYIENFPSGLESLGNLEILSL 273

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           + N+L  +P+T                        LSSL ++  + L  N+ T +P    
Sbjct: 274 AKNKLRHIPDT------------------------LSSLKNLKVLDLEYNQLTIFPK-VL 308

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD-NLLTSLPLDLGTWVGLTELNLG 411
                + S+    N I  +P  I  R     +  + D N LT L +++   + + EL L 
Sbjct: 309 CFLPKLISLILTGNLISSLPKEI--RELKNLEKLLLDHNKLTFLAVEIFQLLKMKELQLT 366

Query: 412 TNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
            N++  +S  I+N   L++L+L  NLLK++P  I +   L+CL L  NKL  LP  I  L
Sbjct: 367 DNKLQVISHKIENFKELKILILDKNLLKEIPEKISHCVMLECLSLSYNKLTGLPKNIYKL 426

Query: 472 KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
           K L++L +  N +V +P  I  L N+  L    N +  +P E+   + +  + L+ N  +
Sbjct: 427 KNLRKLHVNRNNIVRIPEDISRLNNMFILEFSGNIITDVPIEVKNCKKITKVELSHNKIM 486

Query: 532 NNIPFELALCS--NLQIMSLDNCPLSQIPSEI 561
               F + LC+  +L  ++ +   +S+IP +I
Sbjct: 487 Y---FPVGLCALDSLYYLNFNGNYISEIPVDI 515


>gi|428170126|gb|EKX39054.1| hypothetical protein GUITHDRAFT_96825 [Guillardia theta CCMP2712]
          Length = 663

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/468 (29%), Positives = 240/468 (51%), Gaps = 47/468 (10%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           +PP   K+  LE   + GN+L+ LP  IG +  L+ L L +N L  LP S  NLQ L  L
Sbjct: 62  VPPREIKIRSLE---IRGNRLSRLPRTIGGLNLLSELHLDDNELRELPQSAKNLQMLVAL 118

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
            + +N+L+  P  +  LTS+  L++  N I+ V P+   L NL  L +  N+I +LPP++
Sbjct: 119 HINNNQLDIWPPCLQYLTSITELFMNRNTIEFVPPECSTLVNLRHLEVSGNRIYDLPPQV 178

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
           G   +L TL +  N L  LP+ +G  + + +L   +N ++  P  +G+  NL  L LS N
Sbjct: 179 GGWTSLTTLKMDSNRLPALPETLGQLSKVESLSFANNNIITFPMEVGSWHNLRTLDLSKN 238

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
            +  +P ++S    + +  +EG  L  LP G + S+  +  ++ S+              
Sbjct: 239 DIRFLPSSISNSTAMRQLFLEGNPLIQLPLG-MGSMRGLRKLSSSQ-------------- 283

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
                              + SR  +LS        ++ LP ++     LTEL +  N +
Sbjct: 284 ------------------AVLSRRLDLSGFT-----ISVLPKEVIELTSLTELTMRDNNL 320

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL----PNEIGFL 471
             +  +I+ L  LE++ LS+N +K LP+++G L +L+ LD+  N+L+ L    P EI F 
Sbjct: 321 KVVVSEIEQLPQLELVDLSSNRIKMLPATLGKLSRLRRLDVRRNRLKHLPAMIPREISFC 380

Query: 472 KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
             L+ L L  N++  LP  I  L++L+ L + +N +  +PE IG + +L  L L +N  L
Sbjct: 381 TLLKDLQLDGNRIQELPIEITRLSSLARLKLNDNCVSVVPEWIGRMSSLRHLSLGNNR-L 439

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPY 579
            ++P+ ++L  NL +++LD  PL  I + +++GG   ++ +L+    Y
Sbjct: 440 QHVPYSISLL-NLAVLTLDGNPLDSIETGVLMGGAKGLLEHLRYNHNY 486



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 191/403 (47%), Gaps = 24/403 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L  + +  LP S + L  L  L++  N+L   P  + Y+T++T L +  N++  +P  
Sbjct: 95  LHLDDNELRELPQSAKNLQMLVALHINNNQLDIWPPCLQYLTSITELFMNRNTIEFVPPE 154

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
            + L  LR L++  N++ +LP  V   TSL  L +  NR+  +   +  LS +  LS  +
Sbjct: 155 CSTLVNLRHLEVSGNRIYDLPPQVGGWTSLTTLKMDSNRLPALPETLGQLSKVESLSFAN 214

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N I   P E+G   NL TLDL+ N +  LP  I N T +  L L+ N L+ +P  +G++ 
Sbjct: 215 NNIITFPMEVGSWHNLRTLDLSKNDIRFLPSSISNSTAMRQLFLEGNPLIQLPLGMGSMR 274

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L +L            + S+ V     ++ G  +S LP  ++  LTS+  +T+  N   
Sbjct: 275 GLRKL------------SSSQAVLSRRLDLSGFTISVLPKEVI-ELTSLTELTMRDNNLK 321

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIP--YGIFSRAKNLS-KVNMKDNLLTSLPLDLGTW 402
              S    Q   +  ++   N+I  +P   G  SR + L  + N   +L   +P ++   
Sbjct: 322 VVVS-EIEQLPQLELVDLSSNRIKMLPATLGKLSRLRRLDVRRNRLKHLPAMIPREISFC 380

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
             L +L L  N+I +L  +I  L +L  L L++N +  +P  IG +  L+ L L  N+L+
Sbjct: 381 TLLKDLQLDGNRIQELPIEITRLSSLARLKLNDNCVSVVPEWIGRMSSLRHLSLGNNRLQ 440

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAI------GHLTNLSY 499
            +P  I  L  L  L L  N L S+   +      G L +L Y
Sbjct: 441 HVPYSISLLN-LAVLTLDGNPLDSIETGVLMGGAKGLLEHLRY 482



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 120/250 (48%), Gaps = 10/250 (4%)

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
           L SLT +  ++LSRN F     G        Y    +  Q+D++   +  R   +  + +
Sbjct: 21  LGSLTLLEMLSLSRNPFDELCLG------IGYLTKLKDLQLDQLNLKVPPREIKIRSLEI 74

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
           + N L+ LP  +G    L+EL+L  N++ +L +  +NL  L  L ++NN L   P  +  
Sbjct: 75  RGNRLSRLPRTIGGLNLLSELHLDDNELRELPQSAKNLQMLVALHINNNQLDIWPPCLQY 134

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           L  +  L +  N +E +P E   L  L+ L +  N++  LP  +G  T+L+ L +  N L
Sbjct: 135 LTSITELFMNRNTIEFVPPECSTLVNLRHLEVSGNRIYDLPPQVGGWTSLTTLKMDSNRL 194

Query: 508 QSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPS 567
            ++PE +G L  + +L   +N  +   P E+    NL+ + L    +  +PS I     S
Sbjct: 195 PALPETLGQLSKVESLSFANNNII-TFPMEVGSWHNLRTLDLSKNDIRFLPSSI---SNS 250

Query: 568 LIIRYLKMQG 577
             +R L ++G
Sbjct: 251 TAMRQLFLEG 260



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 4/124 (3%)

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L +L L  N++     ++ +L  LE+L LS N   +L   IG L KLK L L++  L+  
Sbjct: 4   LRKLWLNDNKLVACPTELGSLTLLEMLSLSRNPFDELCLGIGYLTKLKDLQLDQLNLKVP 63

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P EI    +++ L ++ N+L  LPR IG L  LS L + +N L+ +P+    L+ L  L+
Sbjct: 64  PREI----KIRSLEIRGNRLSRLPRTIGGLNLLSELHLDDNELRELPQSAKNLQMLVALH 119

Query: 525 LNDN 528
           +N+N
Sbjct: 120 INNN 123



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 5/111 (4%)

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           +R L+ L L +NKL + P E+G L  L+ L L  N    L   IG+LT L  L + + NL
Sbjct: 1   MRSLRKLWLNDNKLVACPTELGSLTLLEMLSLSRNPFDELCLGIGYLTKLKDLQLDQLNL 60

Query: 508 QSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           +  P EI     + +L +  N  L+ +P  +   + L  + LD+  L ++P
Sbjct: 61  KVPPREI----KIRSLEIRGNR-LSRLPRTIGGLNLLSELHLDDNELRELP 106


>gi|291231680|ref|XP_002735791.1| PREDICTED: leucine rich repeat containing 7-like [Saccoglossus
           kowalevskii]
          Length = 839

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 244/485 (50%), Gaps = 32/485 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L +S ++IT++PP +  L +LE L +  N + SLP  IG +T L  L L+ N LTS+P  
Sbjct: 151 LFISNNNITYIPPEISNLVNLEVLMIQNNNIESLPKDIGSLTKLEVLELSYNELTSIPKE 210

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L++L+ L L HNKL  +P  + KL+ L +L L  N++ ++  +I  +  L+ L + +
Sbjct: 211 IGQLEKLKQLYLNHNKLESIPKEMGKLSELTVLGLSSNQLTSLPSEISLMKQLTNLGLNN 270

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP------- 278
           N +  +P  +  L+ L+ L L+ N+L+ LP  I N   L  L L  N++  +P       
Sbjct: 271 NSLGCIPKSICYLEQLIKLGLSGNNLQTLPSVIENWIELCDLQLSDNQIQYLPIQIYWIP 330

Query: 279 -------------DMLGNLINLTRLR---LSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
                        D+   +I LT+LR   L+ N LE +P+ + +  +L    V+G  L  
Sbjct: 331 NLEELNLSNNKIQDISCEIIKLTKLRILGLNNNALERLPDEICQLPNLELLGVDGNKLKE 390

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +PD L+ +L ++  I  S N   + P       + V  +    N +  +P  I +  K L
Sbjct: 391 IPD-LVCNLLALKEIYFSNNCLESVPD-DVCLLSDVEILFLGGNAMKTLPIEI-TNMKRL 447

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
           S + + +N L   PL L +   +  LN+  N I+ +  +I+N+ +L+ L LSNN ++  P
Sbjct: 448 SHLTLDNNQLDHFPLGLCSLAEVQVLNIDDNDITHIPAEIENMSHLQHLTLSNNKIQTFP 507

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
             I  L  LK LD+  N L  LP EI  L  L+ L L  N+    P  +  L +L  L +
Sbjct: 508 LGICRLESLKTLDVSGNDLRELPTEIKKLINLKELFLNQNKFEVFPAVVCRLHSLEKLHL 567

Query: 503 GENNLQSIPE--EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN---CPLSQI 557
             N + S+ E  E+  L++L  ++L+DN    + P EL + SNL+ +  D    C +  +
Sbjct: 568 CGNGMVSVEESTELHHLKSLQEMHLSDNK-FPHFPNELCVISNLKTLHFDQKFGCKVRLL 626

Query: 558 PSEIV 562
           P  I 
Sbjct: 627 PECIA 631



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 216/416 (51%), Gaps = 6/416 (1%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           + +L LS + I +LP  +  + +LEEL L  NK+  +  +I  +T L  LGL  N+L  L
Sbjct: 309 LCDLQLSDNQIQYLPIQIYWIPNLEELNLSNNKIQDISCEIIKLTKLRILGLNNNALERL 368

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           PD +  L  L +L +  NKL E+P +V  L +LK +Y   N +++V  D+  LS++ +L 
Sbjct: 369 PDEICQLPNLELLGVDGNKLKEIPDLVCNLLALKEIYFSNNCLESVPDDVCLLSDVEILF 428

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N ++ LP E+  +K L  L L +N L+  P  + +   +  L++  N++ +IP  + 
Sbjct: 429 LGGNAMKTLPIEITNMKRLSHLTLDNNQLDHFPLGLCSLAEVQVLNIDDNDITHIPAEIE 488

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
           N+ +L  L LS N++++ P  + +   L   +V G  L  LP  +   L ++  + L++N
Sbjct: 489 NMSHLQHLTLSNNKIQTFPLGICRLESLKTLDVSGNDLRELPTEI-KKLINLKELFLNQN 547

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI-FSRAKNLSKVNMKDNLLTSLPLDLGT 401
           KF  +P+    +  S+  ++   N +  +         K+L ++++ DN     P +L  
Sbjct: 548 KFEVFPAV-VCRLHSLEKLHLCGNGMVSVEESTELHHLKSLQEMHLSDNKFPHFPNELCV 606

Query: 402 WVGLTELNLGTN---QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
              L  L+       ++  L E I  LVNLE L + NN L+ LP  IG L KL+ L +  
Sbjct: 607 ISNLKTLHFDQKFGCKVRLLPECIAELVNLEELYVDNNALETLPVMIGALAKLQKLSVCC 666

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           N +  LP  +  L+ L  L L+SNQL+ LP    +L N++ L +  N L   P+++
Sbjct: 667 NNITHLPESLCMLQNLTSLHLESNQLMKLPVRFDNLINIADLRLEFNPLMHPPKDV 722



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 194/380 (51%), Gaps = 27/380 (7%)

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L+ +P  V+ L  L+ L++  N I  + P+I  L NL +L +++N I  LP ++G L  L
Sbjct: 135 LHRIPKQVFNLEQLQCLFISNNNITYIPPEISNLVNLEVLMIQNNNIESLPKDIGSLTKL 194

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
             L+L++N L  +PKEIG    L  L L HN+L +IP  +G L  LT L LS N+L S+P
Sbjct: 195 EVLELSYNELTSIPKEIGQLEKLKQLYLNHNKLESIPKEMGKLSELTVLGLSSNQLTSLP 254

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
             +S    L    +   +L  +P  +   L  +  + LS N     PS            
Sbjct: 255 SEISLMKQLTNLGLNNNSLGCIPKSI-CYLEQLIKLGLSGNNLQTLPS------------ 301

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
                        +      L  + + DN +  LP+ +     L ELNL  N+I  +S +
Sbjct: 302 -------------VIENWIELCDLQLSDNQIQYLPIQIYWIPNLEELNLSNNKIQDISCE 348

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           I  L  L +L L+NN L++LP  I  L  L+ L ++ NKL+ +P+ +  L  L+ +   +
Sbjct: 349 IIKLTKLRILGLNNNALERLPDEICQLPNLELLGVDGNKLKEIPDLVCNLLALKEIYFSN 408

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           N L S+P  +  L+++  L +G N ++++P EI  ++ L  L L DN  L++ P  L   
Sbjct: 409 NCLESVPDDVCLLSDVEILFLGGNAMKTLPIEITNMKRLSHLTL-DNNQLDHFPLGLCSL 467

Query: 542 SNLQIMSLDNCPLSQIPSEI 561
           + +Q++++D+  ++ IP+EI
Sbjct: 468 AEVQVLNIDDNDITHIPAEI 487


>gi|427736832|ref|YP_007056376.1| hypothetical protein Riv7116_3370 [Rivularia sp. PCC 7116]
 gi|427371873|gb|AFY55829.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 421

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 150/422 (35%), Positives = 216/422 (51%), Gaps = 28/422 (6%)

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           LT L L+   L  LP  +  L  L  L L +N L ELP  + +L  LK+L L  N IK+ 
Sbjct: 19  LTTLNLSGEDLHFLPKEIKKLPNLEYLYLGNNHLTELPEEIEQLKKLKLLDLSNNLIKSF 78

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
              I  L+NL +LS+ DN +  LP E+G L NL  LDL++N L +LP E G    L  L 
Sbjct: 79  PLGIAKLTNLKVLSLDDNYLNNLPEEIGNLNNLEYLDLSNNQLNQLPPEFGKLIKLQELC 138

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
           L+ N+L ++P   G L  L  L L  N L  +PE   K ++L + ++    L +LP  + 
Sbjct: 139 LEGNQLTSLPCEFGQLSKLKELDLLENELTYLPEEFGKLINLQKVDLGNNKLITLPKEI- 197

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
             L ++  + +  N+ T+ P                             +   L ++N+ 
Sbjct: 198 GQLANLELLEIGENQLTSLPPE-------------------------LGKLSKLKQLNLS 232

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
            N L+ LPL     + L  L L +NQ +KL  +I  L NL+ L +  N L  L   IG L
Sbjct: 233 VNQLSDLPLSQAKLINLKTLYLCSNQFTKLPAEISRLTNLKSLYVIQNQLNNLTPEIGQL 292

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
             L+ LD+ ENKL SLP EI  L  L+  IL  N L +LP+ IGHLTNL  L++ EN L 
Sbjct: 293 SNLELLDISENKLNSLPTEIEKLTSLRYFILNVNHLSNLPKEIGHLTNLVTLNLQENQLT 352

Query: 509 SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSL 568
           ++P EI  L NL  L+L++N  ++N+P E+   + L+ + L   P+S IP EI+   P  
Sbjct: 353 TLPTEIEKLMNLEYLFLSENK-ISNLPIEIKQLTKLKHLDLSKNPIS-IPPEILKEKPQK 410

Query: 569 II 570
           I+
Sbjct: 411 IL 412



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 144/427 (33%), Positives = 215/427 (50%), Gaps = 31/427 (7%)

Query: 92  EKEFLRCKE----ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVT 147
           E+E L+  E    E +  L+LS   +  LP  ++KL +LE LYL  N L  LP +I  + 
Sbjct: 4   EEELLKIIEQTEKEGLTTLNLSGEDLHFLPKEIKKLPNLEYLYLGNNHLTELPEEIEQLK 63

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
            L  L L+ N + S P  +A L  L+VL L  N LN LP  +  L +L+ L L  N++  
Sbjct: 64  KLKLLDLSNNLIKSFPLGIAKLTNLKVLSLDDNYLNNLPEEIGNLNNLEYLDLSNNQLNQ 123

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
           + P+   L  L  L +  N++  LP E G+L  L  LDL  N L  LP+E G    L  +
Sbjct: 124 LPPEFGKLIKLQELCLEGNQLTSLPCEFGQLSKLKELDLLENELTYLPEEFGKLINLQKV 183

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
           DL +N+L+ +P  +G L NL  L +  N+L S+P  L K   L + N+    LS LP   
Sbjct: 184 DLGNNKLITLPKEIGQLANLELLEIGENQLTSLPPELGKLSKLKQLNLSVNQLSDLPLS- 242

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
            + L ++  + L  N+FT  P+                           SR  NL  + +
Sbjct: 243 QAKLINLKTLYLCSNQFTKLPAE-------------------------ISRLTNLKSLYV 277

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
             N L +L  ++G    L  L++  N+++ L  +I+ L +L   +L+ N L  LP  IG+
Sbjct: 278 IQNQLNNLTPEIGQLSNLELLDISENKLNSLPTEIEKLTSLRYFILNVNHLSNLPKEIGH 337

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           L  L  L+L+EN+L +LP EI  L  L+ L L  N++ +LP  I  LT L +L + +N +
Sbjct: 338 LTNLVTLNLQENQLTTLPTEIEKLMNLEYLFLSENKISNLPIEIKQLTKLKHLDLSKNPI 397

Query: 508 QSIPEEI 514
            SIP EI
Sbjct: 398 -SIPPEI 403



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/176 (38%), Positives = 103/176 (58%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS + ++ LP S  KL +L+ LYL  N+   LP++I  +TNL  L + +N L +L   
Sbjct: 229 LNLSVNQLSDLPLSQAKLINLKTLYLCSNQFTKLPAEISRLTNLKSLYVIQNQLNNLTPE 288

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L +LD+  NKLN LP  + KLTSL+   L  N +  +  +I +L+NL  L++++
Sbjct: 289 IGQLSNLELLDISENKLNSLPTEIEKLTSLRYFILNVNHLSNLPKEIGHLTNLVTLNLQE 348

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           N++  LP E+ +L NL  L L+ N +  LP EI   T L  LDL  N +   P++L
Sbjct: 349 NQLTTLPTEIEKLMNLEYLFLSENKISNLPIEIKQLTKLKHLDLSKNPISIPPEIL 404



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 107/208 (51%), Gaps = 24/208 (11%)

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
           +  + L+ +N+    L  LP ++     L  L LG N +++L E+I+ L  L++L LSNN
Sbjct: 14  TEKEGLTTLNLSGEDLHFLPKEIKKLPNLEYLYLGNNHLTELPEEIEQLKKLKLLDLSNN 73

Query: 437 LLKK-----------------------LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           L+K                        LP  IGNL  L+ LDL  N+L  LP E G L +
Sbjct: 74  LIKSFPLGIAKLTNLKVLSLDDNYLNNLPEEIGNLNNLEYLDLSNNQLNQLPPEFGKLIK 133

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           LQ L L+ NQL SLP   G L+ L  L + EN L  +PEE G L NL  + L +N  +  
Sbjct: 134 LQELCLEGNQLTSLPCEFGQLSKLKELDLLENELTYLPEEFGKLINLQKVDLGNNKLI-T 192

Query: 534 IPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +P E+   +NL+++ +    L+ +P E+
Sbjct: 193 LPKEIGQLANLELLEIGENQLTSLPPEL 220


>gi|421087062|ref|ZP_15547903.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421104771|ref|ZP_15565364.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410365081|gb|EKP20476.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410430171|gb|EKP74541.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 405

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 139/391 (35%), Positives = 213/391 (54%), Gaps = 29/391 (7%)

Query: 145 YVTNLTCLGLAEN---SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
           +V +LT     EN   S T+L ++L N  ++R+LDL  +KL  LP  + +L +L+IL   
Sbjct: 21  FVCSLTQFHAEENHKGSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSE 80

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N++ T+  +I  L NL  L +++N++  LP E+G+L+NL  L L +N L  LP+EIG  
Sbjct: 81  NNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKL 140

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L  L+L  N L  +P  +G L NL  L LS NRL  +PE + +   L + ++ G    
Sbjct: 141 QNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGG---- 196

Query: 322 SLPDGLLSSLTSINNITLSRNK-FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
                              +NK FT  P    TQ  ++  ++ + N++  +P  I  + +
Sbjct: 197 -------------------KNKPFTILPKE-ITQLQNLQELHLKFNRLTVLPKEI-GQLQ 235

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           NL  +++  N LT LP ++G    L  L+L  NQ++ L ++I  L NL+ L L  N  + 
Sbjct: 236 NLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEA 295

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
            P  I   + L+ LDL +N+L +LP EIG L+ LQ+L L  NQL +LP+ IG L  L  L
Sbjct: 296 FPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESL 355

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
            +  N L ++PEEI  L+NL  LYL++N  L
Sbjct: 356 GLDHNQLATLPEEIKQLKNLKKLYLHNNPLL 386



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 124/348 (35%), Positives = 193/348 (55%), Gaps = 7/348 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+S +  LP  + +L +L+ L    N+L +LP +IG + NL  L L  N LT+LP+ 
Sbjct: 54  LDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEE 113

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+VL L +N+L  LP  + KL +L+ L L  NR+  +  +I  L NL  L +  
Sbjct: 114 IGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSL 173

Query: 226 NKIRELPPELGELKNLVTLDLAHNH--LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
           N++  LP E+G+L++L  L L   +     LPKEI     L  L L+ N L  +P  +G 
Sbjct: 174 NRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQ 233

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L NL  L L  NRL  +P+ + +  +L   ++ G  L+ LP   ++ L ++  + L  N+
Sbjct: 234 LQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKE-ITQLQNLQELNLEYNR 292

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
           F A+P    TQF ++  ++   N++  +P  I  + +NL K+++  N LT+LP ++G   
Sbjct: 293 FEAFPK-EITQFQNLQVLDLYQNRLTTLPEEI-GQLQNLQKLHLSRNQLTTLPKEIGRLQ 350

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
            L  L L  NQ++ L E+I+ L NL+ L L NN L  L   I  +RKL
Sbjct: 351 KLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPL--LSEKIERIRKL 396



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/344 (34%), Positives = 180/344 (52%), Gaps = 25/344 (7%)

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           + +L +  +K++ LP E+G+L+NL  L+  +N L  LPKEIG    L  L LQ+N+L  +
Sbjct: 51  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 110

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P+ +G L NL  L L+ N+L ++PE + K  +L E N+    L+ LP  +   L ++  +
Sbjct: 111 PEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI-GRLQNLQEL 169

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            LS N+ T  P                         G     + LS +  K+   T LP 
Sbjct: 170 YLSLNRLTILPE----------------------EIGQLESLRKLS-LGGKNKPFTILPK 206

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++     L EL+L  N+++ L ++I  L NL +L L  N L  LP  IG L+ L  LDL 
Sbjct: 207 EITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLS 266

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
            N+L  LP EI  L+ LQ L L+ N+  + P+ I    NL  L + +N L ++PEEIG L
Sbjct: 267 GNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQL 326

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +NL  L+L+ N  L  +P E+     L+ + LD+  L+ +P EI
Sbjct: 327 QNLQKLHLSRNQ-LTTLPKEIGRLQKLESLGLDHNQLATLPEEI 369



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 173/319 (54%), Gaps = 28/319 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+   + +T LP  + KL +L+EL+L  N+L +LP +IG + NL  L L  N LT
Sbjct: 72  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 131

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK-------------- 206
           +LP+ +  LQ L+ L+L  N+LN LP  + +L +L+ LYL  NR+               
Sbjct: 132 TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRK 191

Query: 207 ----------TVHP-DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
                     T+ P +I  L NL  L ++ N++  LP E+G+L+NL  LDL  N L  LP
Sbjct: 192 LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILP 251

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
           KEIG    L+ LDL  N+L  +P  +  L NL  L L YNR E+ P+ +++  +L   ++
Sbjct: 252 KEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDL 311

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
               L++LP+  +  L ++  + LSRN+ T  P     +   + S+  +HNQ+  +P  I
Sbjct: 312 YQNRLTTLPEE-IGQLQNLQKLHLSRNQLTTLPK-EIGRLQKLESLGLDHNQLATLPEEI 369

Query: 376 FSRAKNLSKVNMKDNLLTS 394
             + KNL K+ + +N L S
Sbjct: 370 -KQLKNLKKLYLHNNPLLS 387



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 202/379 (53%), Gaps = 28/379 (7%)

Query: 110 KSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANL 169
           K S T+L  +++    +  L L  +KL  LP +IG + NL  L    N LT+LP  +  L
Sbjct: 35  KGSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKL 94

Query: 170 QQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR 229
           Q L+ L L++N+L  LP  + +L +LK+L+L  N++ T+  +I  L NL  L++  N++ 
Sbjct: 95  QNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLN 154

Query: 230 ELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL--QHNELVNIPDMLGNLINL 287
            LP E+G L+NL  L L+ N L  LP+EIG    L  L L  ++     +P  +  L NL
Sbjct: 155 ILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNL 214

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L L +NRL  +P+ + +  +L   ++    L+ LP   +  L ++  + LS N+ T  
Sbjct: 215 QELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKE-IGQLKNLLVLDLSGNQLTIL 273

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
           P    TQ  ++  +N E+N+ +  P  I ++ +NL  +++  N LT+LP ++G    L +
Sbjct: 274 PK-EITQLQNLQELNLEYNRFEAFPKEI-TQFQNLQVLDLYQNRLTTLPEEIGQLQNLQK 331

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           L+L  NQ++ L ++I                       G L+KL+ L L+ N+L +LP E
Sbjct: 332 LHLSRNQLTTLPKEI-----------------------GRLQKLESLGLDHNQLATLPEE 368

Query: 468 IGFLKELQRLILQSNQLVS 486
           I  LK L++L L +N L+S
Sbjct: 369 IKQLKNLKKLYLHNNPLLS 387



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 116/201 (57%), Gaps = 5/201 (2%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
            T LP  + +L +L+EL+L  N+L  LP +IG + NL  L L +N LT LP  +  L+ L
Sbjct: 201 FTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNL 260

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            VLDL  N+L  LP  + +L +L+ L L +NR +    +I    NL +L +  N++  LP
Sbjct: 261 LVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLP 320

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            E+G+L+NL  L L+ N L  LPKEIG    L +L L HN+L  +P+ +  L NL +L L
Sbjct: 321 EEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYL 380

Query: 293 SYN-----RLESVPETLSKCV 308
             N     ++E + + L +C+
Sbjct: 381 HNNPLLSEKIERIRKLLPQCI 401



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 123/249 (49%), Gaps = 25/249 (10%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYV------------ 146
           K +N+  L+L  + +  LP  + +L +L+ELYL  N+L  LP +IG +            
Sbjct: 139 KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKN 198

Query: 147 -------------TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLT 193
                         NL  L L  N LT LP  +  LQ LR+LDL  N+L  LP  + +L 
Sbjct: 199 KPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLK 258

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           +L +L L  N++  +  +I  L NL  L++  N+    P E+ + +NL  LDL  N L  
Sbjct: 259 NLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTT 318

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LP+EIG    L  L L  N+L  +P  +G L  L  L L +N+L ++PE + +  +L + 
Sbjct: 319 LPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKL 378

Query: 314 NVEGCALSS 322
            +    L S
Sbjct: 379 YLHNNPLLS 387



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 24/121 (19%)

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           L  ++ N  +++ LDL  +KL+ LP EIG L+ LQ L  ++NQL +LP+ IG L NL  L
Sbjct: 41  LTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 100

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
            +  N L ++PEEIG L+NL                        +++ L+N  L+ +P E
Sbjct: 101 HLQNNQLTTLPEEIGQLQNL------------------------KVLHLNNNQLTTLPEE 136

Query: 561 I 561
           I
Sbjct: 137 I 137



 Score = 38.5 bits (88), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
            +L  A+ +   +  L +  + L+ +P+EIG L+NL  L  ++N  L  +P E+    NL
Sbjct: 39  TNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILN-SENNQLTTLPKEIGKLQNL 97

Query: 545 QIMSLDNCPLSQIPSEI 561
           Q + L N  L+ +P EI
Sbjct: 98  QELHLQNNQLTTLPEEI 114


>gi|45656981|ref|YP_001067.1| hypothetical protein LIC11097 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600218|gb|AAS69704.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|456983452|gb|EMG19761.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 413

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 139/391 (35%), Positives = 213/391 (54%), Gaps = 29/391 (7%)

Query: 145 YVTNLTCLGLAEN---SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
           +V +LT     EN   S T+L ++L N  ++R+LDL  +KL  LP  + +L +L+IL   
Sbjct: 29  FVCSLTQFHAEENHKGSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSE 88

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N++ T+  +I  L NL  L +++N++  LP E+G+L+NL  L L +N L  LP+EIG  
Sbjct: 89  NNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKL 148

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L  L+L  N L  +P  +G L NL  L LS NRL  +PE + +   L + ++ G    
Sbjct: 149 QNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGG---- 204

Query: 322 SLPDGLLSSLTSINNITLSRNK-FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
                              +NK FT  P    TQ  ++  ++ + N++  +P  I  + +
Sbjct: 205 -------------------KNKPFTILPKE-ITQLQNLQELHLKFNRLTVLPKEI-GQLQ 243

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           NL  +++  N LT LP ++G    L  L+L  NQ++ L ++I  L NL+ L L  N  + 
Sbjct: 244 NLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEA 303

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
            P  I   + L+ LDL +N+L +LP EIG L+ LQ+L L  NQL +LP+ IG L  L  L
Sbjct: 304 FPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESL 363

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
            +  N L ++PEEI  L+NL  LYL++N  L
Sbjct: 364 GLDHNQLATLPEEIKQLKNLKKLYLHNNPLL 394



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 124/348 (35%), Positives = 193/348 (55%), Gaps = 7/348 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+S +  LP  + +L +L+ L    N+L +LP +IG + NL  L L  N LT+LP+ 
Sbjct: 62  LDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEE 121

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+VL L +N+L  LP  + KL +L+ L L  NR+  +  +I  L NL  L +  
Sbjct: 122 IGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSL 181

Query: 226 NKIRELPPELGELKNLVTLDLAHNH--LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
           N++  LP E+G+L++L  L L   +     LPKEI     L  L L+ N L  +P  +G 
Sbjct: 182 NRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQ 241

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L NL  L L  NRL  +P+ + +  +L   ++ G  L+ LP   ++ L ++  + L  N+
Sbjct: 242 LQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKE-ITQLQNLQELNLEYNR 300

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
           F A+P    TQF ++  ++   N++  +P  I  + +NL K+++  N LT+LP ++G   
Sbjct: 301 FEAFPK-EITQFQNLQVLDLYQNRLTTLPEEI-GQLQNLQKLHLSRNQLTTLPKEIGRLQ 358

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
            L  L L  NQ++ L E+I+ L NL+ L L NN L  L   I  +RKL
Sbjct: 359 KLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPL--LSEKIERIRKL 404



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/344 (34%), Positives = 180/344 (52%), Gaps = 25/344 (7%)

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           + +L +  +K++ LP E+G+L+NL  L+  +N L  LPKEIG    L  L LQ+N+L  +
Sbjct: 59  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 118

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P+ +G L NL  L L+ N+L ++PE + K  +L E N+    L+ LP  +   L ++  +
Sbjct: 119 PEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI-GRLQNLQEL 177

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            LS N+ T  P                         G     + LS +  K+   T LP 
Sbjct: 178 YLSLNRLTILPE----------------------EIGQLESLRKLS-LGGKNKPFTILPK 214

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++     L EL+L  N+++ L ++I  L NL +L L  N L  LP  IG L+ L  LDL 
Sbjct: 215 EITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLS 274

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
            N+L  LP EI  L+ LQ L L+ N+  + P+ I    NL  L + +N L ++PEEIG L
Sbjct: 275 GNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQL 334

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +NL  L+L+ N  L  +P E+     L+ + LD+  L+ +P EI
Sbjct: 335 QNLQKLHLSRNQ-LTTLPKEIGRLQKLESLGLDHNQLATLPEEI 377



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 173/319 (54%), Gaps = 28/319 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+   + +T LP  + KL +L+EL+L  N+L +LP +IG + NL  L L  N LT
Sbjct: 80  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 139

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK-------------- 206
           +LP+ +  LQ L+ L+L  N+LN LP  + +L +L+ LYL  NR+               
Sbjct: 140 TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRK 199

Query: 207 ----------TVHP-DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
                     T+ P +I  L NL  L ++ N++  LP E+G+L+NL  LDL  N L  LP
Sbjct: 200 LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILP 259

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
           KEIG    L+ LDL  N+L  +P  +  L NL  L L YNR E+ P+ +++  +L   ++
Sbjct: 260 KEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDL 319

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
               L++LP+  +  L ++  + LSRN+ T  P     +   + S+  +HNQ+  +P  I
Sbjct: 320 YQNRLTTLPEE-IGQLQNLQKLHLSRNQLTTLPK-EIGRLQKLESLGLDHNQLATLPEEI 377

Query: 376 FSRAKNLSKVNMKDNLLTS 394
             + KNL K+ + +N L S
Sbjct: 378 -KQLKNLKKLYLHNNPLLS 395



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 202/379 (53%), Gaps = 28/379 (7%)

Query: 110 KSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANL 169
           K S T+L  +++    +  L L  +KL  LP +IG + NL  L    N LT+LP  +  L
Sbjct: 43  KGSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKL 102

Query: 170 QQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR 229
           Q L+ L L++N+L  LP  + +L +LK+L+L  N++ T+  +I  L NL  L++  N++ 
Sbjct: 103 QNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLN 162

Query: 230 ELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL--QHNELVNIPDMLGNLINL 287
            LP E+G L+NL  L L+ N L  LP+EIG    L  L L  ++     +P  +  L NL
Sbjct: 163 ILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNL 222

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L L +NRL  +P+ + +  +L   ++    L+ LP   +  L ++  + LS N+ T  
Sbjct: 223 QELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKE-IGQLKNLLVLDLSGNQLTIL 281

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
           P    TQ  ++  +N E+N+ +  P  I ++ +NL  +++  N LT+LP ++G    L +
Sbjct: 282 PK-EITQLQNLQELNLEYNRFEAFPKEI-TQFQNLQVLDLYQNRLTTLPEEIGQLQNLQK 339

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           L+L  NQ++ L ++I                       G L+KL+ L L+ N+L +LP E
Sbjct: 340 LHLSRNQLTTLPKEI-----------------------GRLQKLESLGLDHNQLATLPEE 376

Query: 468 IGFLKELQRLILQSNQLVS 486
           I  LK L++L L +N L+S
Sbjct: 377 IKQLKNLKKLYLHNNPLLS 395



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 116/201 (57%), Gaps = 5/201 (2%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
            T LP  + +L +L+EL+L  N+L  LP +IG + NL  L L +N LT LP  +  L+ L
Sbjct: 209 FTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNL 268

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            VLDL  N+L  LP  + +L +L+ L L +NR +    +I    NL +L +  N++  LP
Sbjct: 269 LVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLP 328

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            E+G+L+NL  L L+ N L  LPKEIG    L +L L HN+L  +P+ +  L NL +L L
Sbjct: 329 EEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYL 388

Query: 293 SYN-----RLESVPETLSKCV 308
             N     ++E + + L +C+
Sbjct: 389 HNNPLLSEKIERIRKLLPQCI 409



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 123/249 (49%), Gaps = 25/249 (10%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYV------------ 146
           K +N+  L+L  + +  LP  + +L +L+ELYL  N+L  LP +IG +            
Sbjct: 147 KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKN 206

Query: 147 -------------TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLT 193
                         NL  L L  N LT LP  +  LQ LR+LDL  N+L  LP  + +L 
Sbjct: 207 KPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLK 266

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           +L +L L  N++  +  +I  L NL  L++  N+    P E+ + +NL  LDL  N L  
Sbjct: 267 NLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTT 326

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LP+EIG    L  L L  N+L  +P  +G L  L  L L +N+L ++PE + +  +L + 
Sbjct: 327 LPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKL 386

Query: 314 NVEGCALSS 322
            +    L S
Sbjct: 387 YLHNNPLLS 395



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 24/121 (19%)

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           L  ++ N  +++ LDL  +KL+ LP EIG L+ LQ L  ++NQL +LP+ IG L NL  L
Sbjct: 49  LTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 108

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
            +  N L ++PEEIG L+NL                        +++ L+N  L+ +P E
Sbjct: 109 HLQNNQLTTLPEEIGQLQNL------------------------KVLHLNNNQLTTLPEE 144

Query: 561 I 561
           I
Sbjct: 145 I 145



 Score = 38.5 bits (88), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
            +L  A+ +   +  L +  + L+ +P+EIG L+NL  L  ++N  L  +P E+    NL
Sbjct: 47  TNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILN-SENNQLTTLPKEIGKLQNL 105

Query: 545 QIMSLDNCPLSQIPSEI 561
           Q + L N  L+ +P EI
Sbjct: 106 QELHLQNNQLTTLPEEI 122


>gi|260788660|ref|XP_002589367.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
 gi|229274544|gb|EEN45378.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
          Length = 762

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 233/460 (50%), Gaps = 4/460 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N++N D S ++++  PP VEKL  + EL +YGN+L  +PS +  + NL  L +  N L++
Sbjct: 128 NLVNFDASNNNLSTFPPGVEKLQKVRELRIYGNQLTEVPSGVCSLPNLELLSVGNNKLST 187

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
            P  +  LQ+LR+L +  N+L E+P  V  L++L+ L    N+  T    ++ L  L+ L
Sbjct: 188 FPPGVEKLQKLRILYIYGNQLTEVPRGVCSLSNLESLEANGNKFSTFPLGVEKLQKLTRL 247

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + DN++ E+P  +  L NL  LD+ +N L   P  +     L  L +  N+L  +P  +
Sbjct: 248 LIHDNQLTEVPSGVCSLPNLEVLDVGNNKLFTFPPGVEKLQKLRELYIYGNQLTEVPSGV 307

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
            +L NL  L +  N+L + P  + K   L +  +    L+ +P G + SL ++  + +  
Sbjct: 308 RSLPNLEVLSVVNNKLSTFPPGVEKLQKLTKLGINDNQLTEVPSG-VCSLPNLELLVVGN 366

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N  + +P G   +   +  +    NQ+ ++P G+ S   NL  +++ +N L++ P  +  
Sbjct: 367 NMLSTFPPGV-EKLQKLRELRIYGNQLTEVPPGVCS-LPNLEVLHVYNNKLSTFPPGVEK 424

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L EL +  NQ++++   + +L NLEVL + NN +   P  +  L KL+ L +  N+L
Sbjct: 425 LQKLRELRIHDNQLTEVPSRVCSLPNLEVLTVGNNKVSTFPPGVEKLTKLRELYINGNQL 484

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
             +P+ +  L  L++L +  N +  LP  +  L  L  LSV        P ++  L+ L 
Sbjct: 485 TEVPSGVCSLPNLEKLSVGGNPIRRLPDDVTRLARLKALSVPNCQFDEFPRQVLQLKTLE 544

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            LY       + +P E+    +L  +SL+   L  +PS +
Sbjct: 545 VLYAG-GCKFDMVPDEVGNLQHLCYLSLEYNLLRTLPSTM 583



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 235/450 (52%), Gaps = 4/450 (0%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           ++ LP  +E L +LE L++  NKL  LP++I    NL     + N+L++ P  +  LQ++
Sbjct: 93  LSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCLNLVNFDASNNNLSTFPPGVEKLQKV 152

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
           R L +  N+L E+P  V  L +L++L +  N++ T  P ++ L  L +L +  N++ E+P
Sbjct: 153 RELRIYGNQLTEVPSGVCSLPNLELLSVGNNKLSTFPPGVEKLQKLRILYIYGNQLTEVP 212

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             +  L NL +L+   N     P  +     L  L +  N+L  +P  + +L NL  L +
Sbjct: 213 RGVCSLSNLESLEANGNKFSTFPLGVEKLQKLTRLLIHDNQLTEVPSGVCSLPNLEVLDV 272

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
             N+L + P  + K   L E  + G  L+ +P G + SL ++  +++  NK + +P G  
Sbjct: 273 GNNKLFTFPPGVEKLQKLRELYIYGNQLTEVPSG-VRSLPNLEVLSVVNNKLSTFPPGV- 330

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
            +   +  +    NQ+ ++P G+ S   NL  + + +N+L++ P  +     L EL +  
Sbjct: 331 EKLQKLTKLGINDNQLTEVPSGVCS-LPNLELLVVGNNMLSTFPPGVEKLQKLRELRIYG 389

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           NQ++++   + +L NLEVL + NN L   P  +  L+KL+ L + +N+L  +P+ +  L 
Sbjct: 390 NQLTEVPPGVCSLPNLEVLHVYNNKLSTFPPGVEKLQKLRELRIHDNQLTEVPSRVCSLP 449

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            L+ L + +N++ + P  +  LT L  L +  N L  +P  + +L NL  L +  N  + 
Sbjct: 450 NLEVLTVGNNKVSTFPPGVEKLTKLRELYINGNQLTEVPSGVCSLPNLEKLSVGGNP-IR 508

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
            +P ++   + L+ +S+ NC   + P +++
Sbjct: 509 RLPDDVTRLARLKALSVPNCQFDEFPRQVL 538



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 239/502 (47%), Gaps = 25/502 (4%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+  L +  + ++  PP VEKL  L  LY+YGN+L  +P  +  ++NL  L    N
Sbjct: 170 CSLPNLELLSVGNNKLSTFPPGVEKLQKLRILYIYGNQLTEVPRGVCSLSNLESLEANGN 229

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
             ++ P  +  LQ+L  L +  N+L E+P  V  L +L++L +  N++ T  P ++ L  
Sbjct: 230 KFSTFPLGVEKLQKLTRLLIHDNQLTEVPSGVCSLPNLEVLDVGNNKLFTFPPGVEKLQK 289

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N++ E+P  +  L NL  L + +N L   P  +     L  L +  N+L  +
Sbjct: 290 LRELYIYGNQLTEVPSGVRSLPNLEVLSVVNNKLSTFPPGVEKLQKLTKLGINDNQLTEV 349

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  + +L NL  L +  N L + P  + K   L E  + G  L+ +P G + SL ++  +
Sbjct: 350 PSGVCSLPNLELLVVGNNMLSTFPPGVEKLQKLRELRIYGNQLTEVPPG-VCSLPNLEVL 408

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            +  NK + +P G   +   +  +    NQ+ ++P  + S   NL  + + +N +++ P 
Sbjct: 409 HVYNNKLSTFPPGV-EKLQKLRELRIHDNQLTEVPSRVCS-LPNLEVLTVGNNKVSTFPP 466

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
            +     L EL +  NQ++++   + +L NLE L +  N +++LP  +  L +LK L + 
Sbjct: 467 GVEKLTKLRELYINGNQLTEVPSGVCSLPNLEKLSVGGNPIRRLPDDVTRLARLKALSVP 526

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
             + +  P ++  LK L+ L     +   +P  +G+L +L YLS+  N L+++P  +  L
Sbjct: 527 NCQFDEFPRQVLQLKTLEVLYAGGCKFDMVPDEVGNLQHLCYLSLEYNLLRTLPSTMSHL 586

Query: 518 ENLHTLYLNDNT--------C--------------LNNIPFELALCSNLQIMSLDNCPLS 555
            NL  + LN N         C              +  +P  L     L+ + +   PL+
Sbjct: 587 HNLRVVRLNKNKFDTFPEVLCELPAMEKLDISNNNITRLPTALHRADKLRDLDVSGNPLA 646

Query: 556 QIPSEIVVGGPSLIIRYLKMQG 577
             P ++   G   I+ +LK + 
Sbjct: 647 YPPQDVCEQGTGAIMAFLKQEA 668



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 227/433 (52%), Gaps = 4/433 (0%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L    L S+P ++  +T+L  L ++ N LTS+P+++  LQ+L  LD   N L  LP  
Sbjct: 17  LDLSNQGLTSIPEEVFDITDLEALDVSNNKLTSIPEAIGRLQKLYRLDANGNMLTSLPQA 76

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           +  L  LK LY+  N +  +   ++ L NL  L ++DNK+++LP ++    NLV  D ++
Sbjct: 77  ISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCLNLVNFDASN 136

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N+L   P  +     +  L +  N+L  +P  + +L NL  L +  N+L + P  + K  
Sbjct: 137 NNLSTFPPGVEKLQKVRELRIYGNQLTEVPSGVCSLPNLELLSVGNNKLSTFPPGVEKLQ 196

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
            L    + G  L+ +P G + SL+++ ++  + NKF+ +P G   +   +  +    NQ+
Sbjct: 197 KLRILYIYGNQLTEVPRG-VCSLSNLESLEANGNKFSTFPLGV-EKLQKLTRLLIHDNQL 254

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
            ++P G+ S   NL  +++ +N L + P  +     L EL +  NQ++++   +++L NL
Sbjct: 255 TEVPSGVCS-LPNLEVLDVGNNKLFTFPPGVEKLQKLRELYIYGNQLTEVPSGVRSLPNL 313

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           EVL + NN L   P  +  L+KL  L + +N+L  +P+ +  L  L+ L++ +N L + P
Sbjct: 314 EVLSVVNNKLSTFPPGVEKLQKLTKLGINDNQLTEVPSGVCSLPNLELLVVGNNMLSTFP 373

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMS 548
             +  L  L  L +  N L  +P  + +L NL  L++ +N  L+  P  +     L+ + 
Sbjct: 374 PGVEKLQKLRELRIYGNQLTEVPPGVCSLPNLEVLHVYNNK-LSTFPPGVEKLQKLRELR 432

Query: 549 LDNCPLSQIPSEI 561
           + +  L+++PS +
Sbjct: 433 IHDNQLTEVPSRV 445



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 141/523 (26%), Positives = 248/523 (47%), Gaps = 55/523 (10%)

Query: 85  IQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIG 144
           + A LN+++       +  L LDLS   +T +P  V  +T LE L +  NKL S+P  IG
Sbjct: 1   MAAGLNLQRTV-----DGRLYLDLSNQGLTSIPEEVFDITDLEALDVSNNKLTSIPEAIG 55

Query: 145 YVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR 204
            +  L  L    N LTSLP ++++LQ L+ L +  N L+ELP  +  L +L+ L+++ N+
Sbjct: 56  RLQKLYRLDANGNMLTSLPQAISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNK 115

Query: 205 IK-----------------------TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           +K                       T  P ++ L  +  L +  N++ E+P  +  L NL
Sbjct: 116 LKKLPTKIFSCLNLVNFDASNNNLSTFPPGVEKLQKVRELRIYGNQLTEVPSGVCSLPNL 175

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
             L + +N L   P  +     L  L +  N+L  +P  + +L NL  L  + N+  + P
Sbjct: 176 ELLSVGNNKLSTFPPGVEKLQKLRILYIYGNQLTEVPRGVCSLSNLESLEANGNKFSTFP 235

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
             + K   L    +    L+ +P G + SL ++  + +  NK   +P G   +   +  +
Sbjct: 236 LGVEKLQKLTRLLIHDNQLTEVPSG-VCSLPNLEVLDVGNNKLFTFPPGV-EKLQKLREL 293

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
               NQ+ ++P G+ S   NL  +++ +N L++ P  +     LT+L +  NQ++++   
Sbjct: 294 YIYGNQLTEVPSGVRS-LPNLEVLSVVNNKLSTFPPGVEKLQKLTKLGINDNQLTEVPSG 352

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK-----------------------CLDLEE 458
           + +L NLE+LV+ NN+L   P  +  L+KL+                        L +  
Sbjct: 353 VCSLPNLELLVVGNNMLSTFPPGVEKLQKLRELRIYGNQLTEVPPGVCSLPNLEVLHVYN 412

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           NKL + P  +  L++L+ L +  NQL  +P  +  L NL  L+VG N + + P  +  L 
Sbjct: 413 NKLSTFPPGVEKLQKLRELRIHDNQLTEVPSRVCSLPNLEVLTVGNNKVSTFPPGVEKLT 472

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L  LY+N N  L  +P  +    NL+ +S+   P+ ++P ++
Sbjct: 473 KLRELYINGNQ-LTEVPSGVCSLPNLEKLSVGGNPIRRLPDDV 514


>gi|260788682|ref|XP_002589378.1| hypothetical protein BRAFLDRAFT_77821 [Branchiostoma floridae]
 gi|229274555|gb|EEN45389.1| hypothetical protein BRAFLDRAFT_77821 [Branchiostoma floridae]
          Length = 1059

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 231/462 (50%), Gaps = 30/462 (6%)

Query: 104 LNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLP 163
           L LDLS   +T +P  V  +T LE L +  NK+ S+P  I  +  L  L    N LTSLP
Sbjct: 16  LKLDLSNQGLTSIPEEVFDITDLEILDVSNNKIISIPEAICRLQKLYRLDAYSNMLTSLP 75

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
            ++++LQ L+ L +  N L+ELP                         ++ L  L  L +
Sbjct: 76  QAISSLQGLKKLYVHSNNLSELP-----------------------DGLEDLQKLEWLWV 112

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
           +DNK+ +LP ++    NLV  D ++N L   P  +     L  L +  N+L  +P  + +
Sbjct: 113 KDNKLTKLPTKIFSCLNLVNFDASNNKLSAFPPGVEKLQKLRELYIYGNQLTEVPSGVCS 172

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L NL  L +S N+L + P  + K   L E  ++   L+ +P G + SL  +  +T+  NK
Sbjct: 173 LPNLEELDVSNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSG-VCSLPHLELLTVGNNK 231

Query: 344 FTAYPSG----GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
            +A+P G       +   +Y +   +N++   P G+  + + L ++ ++DN LT +P  +
Sbjct: 232 LSAFPPGVEKLQKLRELYIYGVKCHNNKLSTFPPGV-EKLQKLRELYIQDNQLTEVPSGV 290

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
            +   L  L +G N++SK    ++ L  L  L +  N L ++PSS+ +L  L+ L +  N
Sbjct: 291 CSLPHLELLTVGNNKLSKFPPGVEKLQKLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNN 350

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           KL + P  +  L++L+ L +Q NQL  +P  +  L +L  LSV  N L + P  +  L+ 
Sbjct: 351 KLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLEVLSVYNNKLSTFPPGVEKLQK 410

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  LY+ DN  L  +P  +    +L+++++ N  LS+ P  +
Sbjct: 411 LRELYIQDNQ-LTEVPSGVCSLPHLELLTVGNNKLSKFPPGV 451



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 236/467 (50%), Gaps = 33/467 (7%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N++N D S + ++  PP VEKL  L ELY+YGN+L  +PS +  + NL  L ++ N L++
Sbjct: 129 NLVNFDASNNKLSAFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEELDVSNNKLST 188

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
            P  +  LQ+LR L ++ N+L E+P  V  L  L++L +  N++    P ++ L  L  L
Sbjct: 189 FPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGNNKLSAFPPGVEKLQKLREL 248

Query: 222 SM-----RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
            +      +NK+   PP + +L+ L  L +  N L E+P   G C+      L H EL+ 
Sbjct: 249 YIYGVKCHNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPS--GVCS------LPHLELLT 300

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +    GN           N+L   P  + K   L +  + G  L+ +P  +  SL ++  
Sbjct: 301 V----GN-----------NKLSKFPPGVEKLQKLRKLYIYGNQLTEVPSSV-CSLPNLEV 344

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           +++  NK + +P G   +   +  +  + NQ+ ++P G+ S   +L  +++ +N L++ P
Sbjct: 345 LSVYNNKLSTFPPGV-EKLQKLRELYIQDNQLTEVPSGVCS-LPHLEVLSVYNNKLSTFP 402

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +     L EL +  NQ++++   + +L +LE+L + NN L K P  +  L+KL+ L +
Sbjct: 403 PGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGNNKLSKFPPGVEKLQKLRKLYI 462

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+L  +P+ +  L  L+ L + +N+L + P  +  L  L  LSV  +     P ++  
Sbjct: 463 YGNQLTEVPSSVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLKSLSVPASQFDEFPRQVLQ 522

Query: 517 LENLHTLYLND--NTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+ L  LY         + +P E+    +L  ++L+N  L  +PS +
Sbjct: 523 LKTLEELYAGQAGGRKFDIVPDEVGNLQHLWFLALENNLLRTLPSTM 569



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 226/469 (48%), Gaps = 32/469 (6%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C+ + +  LD   + +T LP ++  L  L++LY++ N L+ LP  +  +  L  L + +N
Sbjct: 56  CRLQKLYRLDAYSNMLTSLPQAISSLQGLKKLYVHSNNLSELPDGLEDLQKLEWLWVKDN 115

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            LT LP  + +   L   D  +NKL+  P  V KL  L+ LY+  N++  V   +  L N
Sbjct: 116 KLTKLPTKIFSCLNLVNFDASNNKLSAFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPN 175

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L + +NK+   PP + +L+ L  L +  N L E+P   G C+      L H EL+ +
Sbjct: 176 LEELDVSNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPS--GVCS------LPHLELLTV 227

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC-----ALSSLPDGLLSSLT 332
               GN           N+L + P  + K   L E  + G       LS+ P G +  L 
Sbjct: 228 ----GN-----------NKLSAFPPGVEKLQKLRELYIYGVKCHNNKLSTFPPG-VEKLQ 271

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            +  + +  N+ T  PSG       +  +   +N++ K P G+  + + L K+ +  N L
Sbjct: 272 KLRELYIQDNQLTEVPSGV-CSLPHLELLTVGNNKLSKFPPGV-EKLQKLRKLYIYGNQL 329

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
           T +P  + +   L  L++  N++S     ++ L  L  L + +N L ++PS + +L  L+
Sbjct: 330 TEVPSSVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLE 389

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
            L +  NKL + P  +  L++L+ L +Q NQL  +P  +  L +L  L+VG N L   P 
Sbjct: 390 VLSVYNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGNNKLSKFPP 449

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            +  L+ L  LY+  N  L  +P  +    NL+++S+ N  LS  P  +
Sbjct: 450 GVEKLQKLRKLYIYGNQ-LTEVPSSVCSLPNLEVLSVYNNKLSTFPPGV 497



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 203/418 (48%), Gaps = 23/418 (5%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE 156
           + +E  I  +    + ++  PP VEKL  L ELY+  N+L  +PS +  + +L  L +  
Sbjct: 244 KLRELYIYGVKCHNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGN 303

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N L+  P  +  LQ+LR L +  N+L E+P  V  L +L++L +  N++ T  P ++ L 
Sbjct: 304 NKLSKFPPGVEKLQKLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNKLSTFPPGVEKLQ 363

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
            L  L ++DN++ E+P  +  L +L  L + +N L   P  +     L  L +Q N+L  
Sbjct: 364 KLRELYIQDNQLTEVPSGVCSLPHLEVLSVYNNKLSTFPPGVEKLQKLRELYIQDNQLTE 423

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  + +L +L  L +  N+L   P  + K   L +  + G  L+ +P   + SL ++  
Sbjct: 424 VPSGVCSLPHLELLTVGNNKLSKFPPGVEKLQKLRKLYIYGNQLTEVPSS-VCSLPNLEV 482

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           +++  NK + +P G   +   + S++   +Q D+ P  +                     
Sbjct: 483 LSVYNNKLSTFPPGV-EKLQKLKSLSVPASQFDEFPRQV--------------------- 520

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
           L L T   L     G  +   + +++ NL +L  L L NNLL+ LPS++ +L  L+ + L
Sbjct: 521 LQLKTLEELYAGQAGGRKFDIVPDEVGNLQHLWFLALENNLLRTLPSTMSHLHNLRVVQL 580

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             NK ++ P  +  L  +++L +++N +  LP A+     L  L V  N L   P+++
Sbjct: 581 WNNKFDTFPEVLCELPAMEKLDIRNNNITRLPTALHRADKLKDLDVSGNPLTYPPQDV 638



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 85/158 (53%), Gaps = 1/158 (0%)

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           G  +L+L    ++ + E++ ++ +LE+L +SNN +  +P +I  L+KL  LD   N L S
Sbjct: 14  GRLKLDLSNQGLTSIPEEVFDITDLEILDVSNNKIISIPEAICRLQKLYRLDAYSNMLTS 73

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           LP  I  L+ L++L + SN L  LP  +  L  L +L V +N L  +P +I +  NL   
Sbjct: 74  LPQAISSLQGLKKLYVHSNNLSELPDGLEDLQKLEWLWVKDNKLTKLPTKIFSCLNLVNF 133

Query: 524 YLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             ++N  L+  P  +     L+ + +    L+++PS +
Sbjct: 134 DASNNK-LSAFPPGVEKLQKLRELYIYGNQLTEVPSGV 170


>gi|428181670|gb|EKX50533.1| hypothetical protein GUITHDRAFT_66876, partial [Guillardia theta
           CCMP2712]
          Length = 526

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 157/485 (32%), Positives = 240/485 (49%), Gaps = 77/485 (15%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  ++I  +P S+  L  L  L++  N+L  LP +IG  T L+ L L+EN LT LP SL 
Sbjct: 44  LYNNNIKEIPSSISNLQKLSVLWIQNNELEDLPEEIGNCTQLSVLSLSENRLTKLPYSLG 103

Query: 168 -----------------------NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFN- 203
                                  NLQ L  +D+ HN +N+LP  +   T L  L + FN 
Sbjct: 104 QCTMLRELMIDHNELQVPPDWIRNLQALTYMDVSHNSINKLPAEIGACTELHHLNVSFNS 163

Query: 204 -RIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL--------------------- 241
            +I  +  ++  L++++ L + +N+++ LP +LG+L NL                     
Sbjct: 164 NKISKLPQELGLLADMTELDVSNNRLQALPSDLGKLTNLNILLDGNNLIVVLEDSISMLS 223

Query: 242 --VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLES 299
               LDL+ N L ELP EI   T L  L L +N +  +P  +GNL+ +  + LS N LE 
Sbjct: 224 SLRKLDLSFNMLRELPPEIIFLTNLEGLYLVNNRIKTLPGDIGNLLKMVEVNLSENELEY 283

Query: 300 VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP----------- 348
           +PET+ K   L    +E  AL+ LP+ + + LTS+  I+L+ N     P           
Sbjct: 284 IPETVGKMEALQSLVIEENALNYLPNQI-NGLTSLTKISLANNALDMLPAESFAIGYLYK 342

Query: 349 -----------SGGP---TQFTSVYSINFEHNQIDKIPY--GIFSRAKNLSKVNMKDNLL 392
                      S  P   +Q T++  ++   NQI K+PY  G+ S  + L  +++  N+L
Sbjct: 343 LTELRFSNNQLSSIPEIISQLTTLDILHLAKNQIRKLPYELGVLSSLRELD-LSLAGNML 401

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
             +P  +G + GL +L L  NQ++ L   + +L+ LE L L NN L  LP  +G LR LK
Sbjct: 402 QMIPSGIGNFQGLKKLFLNDNQLAILPPSVGDLLELEELQLFNNELIALPERLGQLRNLK 461

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
            +++  NKL  +   IG L  L++L L  N L  LPR IG +  L +LS+  N LQS+P 
Sbjct: 462 QMNMSNNKLRVVLPAIGNLSNLEKLNLSHNLLQGLPREIGQIEKLLFLSLEHNELQSLPV 521

Query: 513 EIGTL 517
           ++G L
Sbjct: 522 QLGHL 526



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 143/415 (34%), Positives = 216/415 (52%), Gaps = 19/415 (4%)

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            LT +P  +  L +L+VL L  N ++E+P  +  L  L  + L  N IK +   I  L  
Sbjct: 2   GLTEIPADIFELTELKVLWLHDNNISEIPTEIGNLQELNQIRLYNNNIKEIPSSISNLQK 61

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           LS+L +++N++ +LP E+G    L  L L+ N L +LP  +G CTML  L + HNEL   
Sbjct: 62  LSVLWIQNNELEDLPEEIGNCTQLSVLSLSENRLTKLPYSLGQCTMLRELMIDHNELQVP 121

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE--GCALSSLPD--GLLSSLTS 333
           PD + NL  LT + +S+N +  +P  +  C  L+  NV      +S LP   GLL+ +T 
Sbjct: 122 PDWIRNLQALTYMDVSHNSINKLPAEIGACTELHHLNVSFNSNKISKLPQELGLLADMTE 181

Query: 334 INNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
           ++   +S N+  A PS  G  T      +I  + N +  +     S   +L K+++  N+
Sbjct: 182 LD---VSNNRLQALPSDLGKLTNL----NILLDGNNLIVVLEDSISMLSSLRKLDLSFNM 234

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           L  LP ++     L  L L  N+I  L  DI NL+ +  + LS N L+ +P ++G +  L
Sbjct: 235 LRELPPEIIFLTNLEGLYLVNNRIKTLPGDIGNLLKMVEVNLSENELEYIPETVGKMEAL 294

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR---AIGHLTNLSYLSVGENNLQ 508
           + L +EEN L  LPN+I  L  L ++ L +N L  LP    AIG+L  L+ L    N L 
Sbjct: 295 QSLVIEENALNYLPNQINGLTSLTKISLANNALDMLPAESFAIGYLYKLTELRFSNNQLS 354

Query: 509 SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ--IMSLDNCPLSQIPSEI 561
           SIPE I  L  L  L+L  N  +  +P+EL + S+L+   +SL    L  IPS I
Sbjct: 355 SIPEIISQLTTLDILHLAKNQ-IRKLPYELGVLSSLRELDLSLAGNMLQMIPSGI 408



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 144/501 (28%), Positives = 253/501 (50%), Gaps = 53/501 (10%)

Query: 112 SITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQ 171
            +T +P  + +LT L+ L+L+ N ++ +P++IG +  L  + L  N++  +P S++NLQ+
Sbjct: 2   GLTEIPADIFELTELKVLWLHDNNISEIPTEIGNLQELNQIRLYNNNIKEIPSSISNLQK 61

Query: 172 LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
           L VL +++N+L +LP  +   T L +L L  NR+  +   +   + L  L +  N+++  
Sbjct: 62  LSVLWIQNNELEDLPEEIGNCTQLSVLSLSENRLTKLPYSLGQCTMLRELMIDHNELQVP 121

Query: 232 PPELGELKNLVTLDLAHNHLEELPKEIGNCTML--VTLDLQHNELVNIPDMLGNLINLTR 289
           P  +  L+ L  +D++HN + +LP EIG CT L  + +    N++  +P  LG L ++T 
Sbjct: 122 PDWIRNLQALTYMDVSHNSINKLPAEIGACTELHHLNVSFNSNKISKLPQELGLLADMTE 181

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP- 348
           L +S NRL+++P  L K  +LN   ++G  L  + +  +S L+S+  + LS N     P 
Sbjct: 182 LDVSNNRLQALPSDLGKLTNLNIL-LDGNNLIVVLEDSISMLSSLRKLDLSFNMLRELPP 240

Query: 349 ---------------------SGGPTQFTSVYSINFEHNQIDKIPYGI------------ 375
                                 G       +  +N   N+++ IP  +            
Sbjct: 241 EIIFLTNLEGLYLVNNRIKTLPGDIGNLLKMVEVNLSENELEYIPETVGKMEALQSLVIE 300

Query: 376 ----------FSRAKNLSKVNMKDNLLTSLPLD---LGTWVGLTELNLGTNQISKLSEDI 422
                      +   +L+K+++ +N L  LP +   +G    LTEL    NQ+S + E I
Sbjct: 301 ENALNYLPNQINGLTSLTKISLANNALDMLPAESFAIGYLYKLTELRFSNNQLSSIPEII 360

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE--ENKLESLPNEIGFLKELQRLILQ 480
             L  L++L L+ N ++KLP  +G L  L+ LDL    N L+ +P+ IG  + L++L L 
Sbjct: 361 SQLTTLDILHLAKNQIRKLPYELGVLSSLRELDLSLAGNMLQMIPSGIGNFQGLKKLFLN 420

Query: 481 SNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELAL 540
            NQL  LP ++G L  L  L +  N L ++PE +G L NL  + +++N     +P  +  
Sbjct: 421 DNQLAILPPSVGDLLELEELQLFNNELIALPERLGQLRNLKQMNMSNNKLRVVLP-AIGN 479

Query: 541 CSNLQIMSLDNCPLSQIPSEI 561
            SNL+ ++L +  L  +P EI
Sbjct: 480 LSNLEKLNLSHNLLQGLPREI 500



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 133/383 (34%), Positives = 206/383 (53%), Gaps = 8/383 (2%)

Query: 94  EFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLG 153
           E   C E + LN+  + + I+ LP  +  L  + EL +  N+L +LPS +G +TNL  L 
Sbjct: 147 EIGACTELHHLNVSFNSNKISKLPQELGLLADMTELDVSNNRLQALPSDLGKLTNLNILL 206

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
              N +  L DS++ L  LR LDL  N L ELP  +  LT+L+ LYL  NRIKT+  DI 
Sbjct: 207 DGNNLIVVLEDSISMLSSLRKLDLSFNMLRELPPEIIFLTNLEGLYLVNNRIKTLPGDIG 266

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L  +  +++ +N++  +P  +G+++ L +L +  N L  LP +I   T L  + L +N 
Sbjct: 267 NLLKMVEVNLSENELEYIPETVGKMEALQSLVIEENALNYLPNQINGLTSLTKISLANNA 326

Query: 274 LVNIPD---MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLL 328
           L  +P     +G L  LT LR S N+L S+PE +S+   L+  ++    +  LP   G+L
Sbjct: 327 LDMLPAESFAIGYLYKLTELRFSNNQLSSIPEIISQLTTLDILHLAKNQIRKLPYELGVL 386

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           SSL  + +++L+ N     PS G   F  +  +    NQ+  +P  +    +        
Sbjct: 387 SSLREL-DLSLAGNMLQMIPS-GIGNFQGLKKLFLNDNQLAILPPSVGDLLELEELQLF- 443

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
           +N L +LP  LG    L ++N+  N++  +   I NL NLE L LS+NLL+ LP  IG +
Sbjct: 444 NNELIALPERLGQLRNLKQMNMSNNKLRVVLPAIGNLSNLEKLNLSHNLLQGLPREIGQI 503

Query: 449 RKLKCLDLEENKLESLPNEIGFL 471
            KL  L LE N+L+SLP ++G L
Sbjct: 504 EKLLFLSLEHNELQSLPVQLGHL 526


>gi|300868028|ref|ZP_07112666.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
 gi|300333948|emb|CBN57844.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
          Length = 376

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/356 (34%), Positives = 191/356 (53%), Gaps = 30/356 (8%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           LDL + +L E+P  +  LT L+ L L  N++  V   I  LS L +L++ +NK+ E+P  
Sbjct: 25  LDLGYMELTEVPEAIATLTQLQRLDLDCNQLTKVPEAIASLSQLQILNLSNNKLTEVPEA 84

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
           +  L  L TL+L +N L E+P+ I   T L  L L +N+L  +P+ + +L  L  L L++
Sbjct: 85  IASLSQLQTLNLIYNKLTEVPEAIATLTQLQKLYLSNNQLTQVPEAIASLSQLQTLNLNF 144

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGP 352
           N+L  VPE ++                        SL+ +  + LS N+ T  P      
Sbjct: 145 NQLTEVPEAIA------------------------SLSQLRRLNLSYNQLTEVPETIASL 180

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
           TQ   +Y     +NQ+ K+P  I S  + L ++++ DN LT++P  + +   L  LNL  
Sbjct: 181 TQLEWLY---LNNNQLRKVPEAIASLTQ-LQRLSLSDNELTAVPEAIASLSQLRSLNLSN 236

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           NQ+++L E I +L  L+ L L  N L +LP +I +L +L+ L L  N+L ++P  I  L 
Sbjct: 237 NQLTELPEAIASLTQLQELYLVGNQLTELPEAIASLTQLQELYLVGNELTAVPEAIASLT 296

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           +LQRL L  N+L ++P AI  LT+L  L +  N L  +PE I +L  L  LYL+DN
Sbjct: 297 QLQRLSLSDNELTAVPEAIASLTHLQGLDLSYNQLTQVPEAIASLSQLQELYLDDN 352



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/342 (33%), Positives = 190/342 (55%), Gaps = 7/342 (2%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE 156
           + ++E    LDL    +T +P ++  LT L+ L L  N+L  +P  I  ++ L  L L+ 
Sbjct: 16  KAQQEGATKLDLGYMELTEVPEAIATLTQLQRLDLDCNQLTKVPEAIASLSQLQILNLSN 75

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N LT +P+++A+L QL+ L+L +NKL E+P  +  LT L+ LYL  N++  V   I  LS
Sbjct: 76  NKLTEVPEAIASLSQLQTLNLIYNKLTEVPEAIATLTQLQKLYLSNNQLTQVPEAIASLS 135

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
            L  L++  N++ E+P  +  L  L  L+L++N L E+P+ I + T L  L L +N+L  
Sbjct: 136 QLQTLNLNFNQLTEVPEAIASLSQLRRLNLSYNQLTEVPETIASLTQLEWLYLNNNQLRK 195

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P+ + +L  L RL LS N L +VPE ++    L   N+    L+ LP+  ++SLT +  
Sbjct: 196 VPEAIASLTQLQRLSLSDNELTAVPEAIASLSQLRSLNLSNNQLTELPEA-IASLTQLQE 254

Query: 337 ITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
           + L  N+ T  P      TQ   +Y +    N++  +P  I S  + L ++++ DN LT+
Sbjct: 255 LYLVGNQLTELPEAIASLTQLQELYLVG---NELTAVPEAIASLTQ-LQRLSLSDNELTA 310

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
           +P  + +   L  L+L  NQ++++ E I +L  L+ L L +N
Sbjct: 311 VPEAIASLTHLQGLDLSYNQLTQVPEAIASLSQLQELYLDDN 352



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/319 (34%), Positives = 173/319 (54%), Gaps = 4/319 (1%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           LDL +  L E+P+ I   T L  LDL  N+L  +P+ + +L  L  L LS N+L  VPE 
Sbjct: 25  LDLGYMELTEVPEAIATLTQLQRLDLDCNQLTKVPEAIASLSQLQILNLSNNKLTEVPEA 84

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           ++    L   N+    L+ +P+  +++LT +  + LS N+ T  P    +  + + ++N 
Sbjct: 85  IASLSQLQTLNLIYNKLTEVPEA-IATLTQLQKLYLSNNQLTQVPEAIAS-LSQLQTLNL 142

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
             NQ+ ++P  I S ++ L ++N+  N LT +P  + +   L  L L  NQ+ K+ E I 
Sbjct: 143 NFNQLTEVPEAIASLSQ-LRRLNLSYNQLTEVPETIASLTQLEWLYLNNNQLRKVPEAIA 201

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           +L  L+ L LS+N L  +P +I +L +L+ L+L  N+L  LP  I  L +LQ L L  NQ
Sbjct: 202 SLTQLQRLSLSDNELTAVPEAIASLSQLRSLNLSNNQLTELPEAIASLTQLQELYLVGNQ 261

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
           L  LP AI  LT L  L +  N L ++PE I +L  L  L L+DN  L  +P  +A  ++
Sbjct: 262 LTELPEAIASLTQLQELYLVGNELTAVPEAIASLTQLQRLSLSDNE-LTAVPEAIASLTH 320

Query: 544 LQIMSLDNCPLSQIPSEIV 562
           LQ + L    L+Q+P  I 
Sbjct: 321 LQGLDLSYNQLTQVPEAIA 339



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 186/359 (51%), Gaps = 31/359 (8%)

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L L +  +  V   I  L+ L  L +  N++ ++P  +  L  L  L+L++N L E+P+ 
Sbjct: 25  LDLGYMELTEVPEAIATLTQLQRLDLDCNQLTKVPEAIASLSQLQILNLSNNKLTEVPEA 84

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           I + + L TL+L +N+L  +P+ +  L  L +L LS N+L  VPE ++    L   N+  
Sbjct: 85  IASLSQLQTLNLIYNKLTEVPEAIATLTQLQKLYLSNNQLTQVPEAIASLSQLQTLNLNF 144

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGI 375
             L+ +P+ + +SL+ +  + LS N+ T  P      TQ   +Y     +NQ+ K+P  I
Sbjct: 145 NQLTEVPEAI-ASLSQLRRLNLSYNQLTEVPETIASLTQLEWLY---LNNNQLRKVPEAI 200

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
            S  + L ++++ DN LT++P  + +   L  LNL  NQ+++L E I +L  L+ L L  
Sbjct: 201 ASLTQ-LQRLSLSDNELTAVPEAIASLSQLRSLNLSNNQLTELPEAIASLTQLQELYLVG 259

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N L +LP +I +L +L+ L L  N+L ++P  I  L +LQRL L  N+L ++P AI  LT
Sbjct: 260 NQLTELPEAIASLTQLQELYLVGNELTAVPEAIASLTQLQRLSLSDNELTAVPEAIASLT 319

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
           +L  L +  N L  +PE I +L  L  LYL                        D+ PL
Sbjct: 320 HLQGLDLSYNQLTQVPEAIASLSQLQELYL------------------------DDNPL 354



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 107/186 (57%), Gaps = 1/186 (0%)

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
           ++ +  +K+++    LT +P  + T   L  L+L  NQ++K+ E I +L  L++L LSNN
Sbjct: 17  AQQEGATKLDLGYMELTEVPEAIATLTQLQRLDLDCNQLTKVPEAIASLSQLQILNLSNN 76

Query: 437 LLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
            L ++P +I +L +L+ L+L  NKL  +P  I  L +LQ+L L +NQL  +P AI  L+ 
Sbjct: 77  KLTEVPEAIASLSQLQTLNLIYNKLTEVPEAIATLTQLQKLYLSNNQLTQVPEAIASLSQ 136

Query: 497 LSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ 556
           L  L++  N L  +PE I +L  L  L L+ N  L  +P  +A  + L+ + L+N  L +
Sbjct: 137 LQTLNLNFNQLTEVPEAIASLSQLRRLNLSYNQ-LTEVPETIASLTQLEWLYLNNNQLRK 195

Query: 557 IPSEIV 562
           +P  I 
Sbjct: 196 VPEAIA 201


>gi|428163352|gb|EKX32427.1| hypothetical protein GUITHDRAFT_121393 [Guillardia theta CCMP2712]
          Length = 1894

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 165/530 (31%), Positives = 272/530 (51%), Gaps = 56/530 (10%)

Query: 96  LRCKEENILN-------LDLSKSSITHLPPSV-EKLTHLEELYLYGNKLASLPSQI-GYV 146
           +R  +E + N       + LS + +T +P +V   L  L+ LYL  NKL S+P  +   +
Sbjct: 78  IRRIDEGVFNNTWSLTEIRLSGNKLTSVPATVFAGLASLQYLYLSSNKLTSIPETVFAGL 137

Query: 147 TNLTCLGLAENSLTSLPDS-LANLQQLRVLDLRHNKLNELPMVVY-KLTSLKILYLRFNR 204
            ++  L L+ N LTS+P++  A L  L+ L L +NKL  +P  V+  L SL+ LYL  N+
Sbjct: 138 ASIRVLILSGNELTSVPETVFAGLASLQYLYLDNNKLTSVPATVFNGLASLQTLYLSSNK 197

Query: 205 IKTVHPDIQY--------------------------LSNLSMLSMRDNKIRELPPE-LGE 237
           + +V P+  +                          L++L  L + DN++  +P      
Sbjct: 198 LTSV-PETVFNGLASLRSLYLDNNELTSVPETVFAGLASLQTLYLYDNELTSIPATVFAG 256

Query: 238 LKNLVTLDLAHNHLEELPKEIGN-CTMLVTLDLQHNELVNIPD-MLGNLINLTRLRLSYN 295
           L +L TL L++N L  +P+ + +    L +L L +NEL ++P+ +   L +L  L LS N
Sbjct: 257 LASLQTLYLSYNKLTSVPETVFDGLASLRSLYLSYNELTSVPETVFDGLASLQYLYLSSN 316

Query: 296 RLESVPET-LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
           +L SVP T  +    L    + G  L+S+P+ + + L S+  + LS NK T+ P      
Sbjct: 317 KLTSVPATVFAGLTSLQTLYLSGNELTSVPETVFTGLASLQTLYLSSNKLTSVPETVFNG 376

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN---LG 411
             S+ ++    N++  +P  +F+   +L  + + DN LTS+P  +  + GLT L    L 
Sbjct: 377 LASLQTLYLSSNKLTSVPATVFAGLASLQYLYLYDNELTSIPATV--FAGLTSLQSLYLS 434

Query: 412 TNQISKLSEDI-QNLVNLEVLVLSNNLLKKLPSSIGN-LRKLKCLDLEENKLESLPNEIG 469
           +N+++ + E +   L +L+ L LS+N L  +P+++ N L  L+ L L +N+L S+P   G
Sbjct: 435 SNKLTSVPETVFDGLASLQTLYLSSNKLTSVPATVFNGLASLQTLYLYDNELTSIP-ATG 493

Query: 470 F--LKELQRLILQSNQLVSLPRAI-GHLTNLSYLSVGENNLQSIPEEI-GTLENLHTLYL 525
           F  L  LQ L L SN+L S+P  +   L +L  L +  N L S+PE +   L +L TLYL
Sbjct: 494 FNGLASLQTLYLSSNELTSIPETVFAGLASLQTLYLSGNELTSVPETVFAGLASLQTLYL 553

Query: 526 NDNTCLNNIP-FELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
           + N  L ++P    A  ++LQ + L +  L+ IP  +  G  SL   YL 
Sbjct: 554 SGNE-LTSVPETVFAGLASLQTLYLSSNELTSIPETVFAGLASLQYLYLS 602



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 157/482 (32%), Positives = 251/482 (52%), Gaps = 21/482 (4%)

Query: 105 NLDLSKSSITHLPPSV-EKLTHLEELYLYGNKLASLPSQI-GYVTNLTCLGLAENSLTSL 162
            L LS + +T +P +V   L  L  LYL  N+L S+P  +   + +L  L L +N LTS+
Sbjct: 190 TLYLSSNKLTSVPETVFNGLASLRSLYLDNNELTSVPETVFAGLASLQTLYLYDNELTSI 249

Query: 163 PDS-LANLQQLRVLDLRHNKLNELPMVVYK-LTSLKILYLRFNRIKTVHPDIQY--LSNL 218
           P +  A L  L+ L L +NKL  +P  V+  L SL+ LYL +N + +V P+  +  L++L
Sbjct: 250 PATVFAGLASLQTLYLSYNKLTSVPETVFDGLASLRSLYLSYNELTSV-PETVFDGLASL 308

Query: 219 SMLSMRDNKIRELPPE-LGELKNLVTLDLAHNHLEELPKEI-GNCTMLVTLDLQHNELVN 276
             L +  NK+  +P      L +L TL L+ N L  +P+ +      L TL L  N+L +
Sbjct: 309 QYLYLSSNKLTSVPATVFAGLTSLQTLYLSGNELTSVPETVFTGLASLQTLYLSSNKLTS 368

Query: 277 IPDMLGN-LINLTRLRLSYNRLESVPET-LSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           +P+ + N L +L  L LS N+L SVP T  +    L    +    L+S+P  + + LTS+
Sbjct: 369 VPETVFNGLASLQTLYLSSNKLTSVPATVFAGLASLQYLYLYDNELTSIPATVFAGLTSL 428

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS NK T+ P        S+ ++    N++  +P  +F+   +L  + + DN LTS
Sbjct: 429 QSLYLSSNKLTSVPETVFDGLASLQTLYLSSNKLTSVPATVFNGLASLQTLYLYDNELTS 488

Query: 395 LPL-DLGTWVGLTELNLGTNQISKLSEDI-QNLVNLEVLVLSNNLLKKLPSSI-GNLRKL 451
           +P         L  L L +N+++ + E +   L +L+ L LS N L  +P ++   L  L
Sbjct: 489 IPATGFNGLASLQTLYLSSNELTSIPETVFAGLASLQTLYLSGNELTSVPETVFAGLASL 548

Query: 452 KCLDLEENKLESLPNEI-GFLKELQRLILQSNQLVSLPRAI-GHLTNLSYLSVGENNLQS 509
           + L L  N+L S+P  +   L  LQ L L SN+L S+P  +   L +L YL +  N L S
Sbjct: 549 QTLYLSGNELTSVPETVFAGLASLQTLYLSSNELTSIPETVFAGLASLQYLYLSSNKLTS 608

Query: 510 IPEEI-GTLENLHTLYLNDNTCLNNIPFELAL--CSNLQIMSLDNCPLSQIPSEIVVGGP 566
           +PE +   L +L TLYL+ N  L ++P E      ++LQ + L    L+ +P+ +  G  
Sbjct: 609 VPETVFAGLASLQTLYLSYNE-LTSVP-ETVFNGLASLQTLYLSYNKLTSVPATVFAGLA 666

Query: 567 SL 568
           SL
Sbjct: 667 SL 668



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 158/489 (32%), Positives = 256/489 (52%), Gaps = 23/489 (4%)

Query: 105 NLDLSKSSITHLPPSV-EKLTHLEELYLYGNKLASLPSQI-GYVTNLTCLGLAENSLTSL 162
           +L LS + +T +P +V + L  L+ LYL  NKL S+P+ +   +T+L  L L+ N LTS+
Sbjct: 286 SLYLSYNELTSVPETVFDGLASLQYLYLSSNKLTSVPATVFAGLTSLQTLYLSGNELTSV 345

Query: 163 PDS-LANLQQLRVLDLRHNKLNELPMVVY-KLTSLKILYLRFNRIKTVHPDI-QYLSNLS 219
           P++    L  L+ L L  NKL  +P  V+  L SL+ LYL  N++ +V   +   L++L 
Sbjct: 346 PETVFTGLASLQTLYLSSNKLTSVPETVFNGLASLQTLYLSSNKLTSVPATVFAGLASLQ 405

Query: 220 MLSMRDNKIRELPPE-LGELKNLVTLDLAHNHLEELPKEIGN-CTMLVTLDLQHNELVNI 277
            L + DN++  +P      L +L +L L+ N L  +P+ + +    L TL L  N+L ++
Sbjct: 406 YLYLYDNELTSIPATVFAGLTSLQSLYLSSNKLTSVPETVFDGLASLQTLYLSSNKLTSV 465

Query: 278 PDMLGN-LINLTRLRLSYNRLESVPET-LSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           P  + N L +L  L L  N L S+P T  +    L    +    L+S+P+ + + L S+ 
Sbjct: 466 PATVFNGLASLQTLYLYDNELTSIPATGFNGLASLQTLYLSSNELTSIPETVFAGLASLQ 525

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + LS N+ T+ P        S+ ++    N++  +P  +F+   +L  + +  N LTS+
Sbjct: 526 TLYLSGNELTSVPETVFAGLASLQTLYLSGNELTSVPETVFAGLASLQTLYLSSNELTSI 585

Query: 396 PLDLGTWVGLTELN---LGTNQISKLSEDI-QNLVNLEVLVLSNNLLKKLPSSIGN-LRK 450
           P  +  + GL  L    L +N+++ + E +   L +L+ L LS N L  +P ++ N L  
Sbjct: 586 PETV--FAGLASLQYLYLSSNKLTSVPETVFAGLASLQTLYLSYNELTSVPETVFNGLAS 643

Query: 451 LKCLDLEENKLESLPNEI-GFLKELQRLILQSNQLVSLPRAI-GHLTNLSYLSVGENNLQ 508
           L+ L L  NKL S+P  +   L  L+ L L  N+L S+P  +   L +L  LS+  N L 
Sbjct: 644 LQTLYLSYNKLTSVPATVFAGLASLRSLGLYDNKLTSVPATVFAGLASLRSLSLDFNELT 703

Query: 509 SIPEEI-GTLENLHTLYLNDNTCLNNIPFELAL--CSNLQIMSLDNCPLSQIPSEIVVGG 565
           SIPE +   L +L TLYL DN  L ++P E      ++LQ + LDN  L+ IP  +  G 
Sbjct: 704 SIPETVFAGLTSLQTLYLYDNE-LTSVP-ETVFNGLASLQYLYLDNNKLTSIPETVFAGL 761

Query: 566 PSLIIRYLK 574
            S+   YL 
Sbjct: 762 ASVQTLYLS 770



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 156/480 (32%), Positives = 246/480 (51%), Gaps = 23/480 (4%)

Query: 113 ITHLPPSV-EKLTHLEELYLYGNKLASLPSQI-GYVTNLTCLGLAENSLTSLPDSLAN-L 169
           +T +P +V   L  L+ LYL  NKL S+P  +   + +L  L L+ N LTS+P+++ + L
Sbjct: 246 LTSIPATVFAGLASLQTLYLSYNKLTSVPETVFDGLASLRSLYLSYNELTSVPETVFDGL 305

Query: 170 QQLRVLDLRHNKLNELPMVVYK-LTSLKILYLRFNRIKTVHPDIQY--LSNLSMLSMRDN 226
             L+ L L  NKL  +P  V+  LTSL+ LYL  N + +V P+  +  L++L  L +  N
Sbjct: 306 ASLQYLYLSSNKLTSVPATVFAGLTSLQTLYLSGNELTSV-PETVFTGLASLQTLYLSSN 364

Query: 227 KIRELPPE-LGELKNLVTLDLAHNHLEELPKEI-GNCTMLVTLDLQHNELVNIP-DMLGN 283
           K+  +P      L +L TL L+ N L  +P  +      L  L L  NEL +IP  +   
Sbjct: 365 KLTSVPETVFNGLASLQTLYLSSNKLTSVPATVFAGLASLQYLYLYDNELTSIPATVFAG 424

Query: 284 LINLTRLRLSYNRLESVPET-LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
           L +L  L LS N+L SVPET       L    +    L+S+P  + + L S+  + L  N
Sbjct: 425 LTSLQSLYLSSNKLTSVPETVFDGLASLQTLYLSSNKLTSVPATVFNGLASLQTLYLYDN 484

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
           + T+ P+ G     S+ ++    N++  IP  +F+   +L  + +  N LTS+P  +  +
Sbjct: 485 ELTSIPATGFNGLASLQTLYLSSNELTSIPETVFAGLASLQTLYLSGNELTSVPETV--F 542

Query: 403 VGLTELN---LGTNQISKLSEDI-QNLVNLEVLVLSNNLLKKLPSSI-GNLRKLKCLDLE 457
            GL  L    L  N+++ + E +   L +L+ L LS+N L  +P ++   L  L+ L L 
Sbjct: 543 AGLASLQTLYLSGNELTSVPETVFAGLASLQTLYLSSNELTSIPETVFAGLASLQYLYLS 602

Query: 458 ENKLESLPNEI-GFLKELQRLILQSNQLVSLPRAIGH-LTNLSYLSVGENNLQSIPEEI- 514
            NKL S+P  +   L  LQ L L  N+L S+P  + + L +L  L +  N L S+P  + 
Sbjct: 603 SNKLTSVPETVFAGLASLQTLYLSYNELTSVPETVFNGLASLQTLYLSYNKLTSVPATVF 662

Query: 515 GTLENLHTLYLNDNTCLNNIPFE-LALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYL 573
             L +L +L L DN  L ++P    A  ++L+ +SLD   L+ IP  +  G  SL   YL
Sbjct: 663 AGLASLRSLGLYDNK-LTSVPATVFAGLASLRSLSLDFNELTSIPETVFAGLTSLQTLYL 721



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 160/553 (28%), Positives = 253/553 (45%), Gaps = 92/553 (16%)

Query: 105  NLDLSKSSITHLPPSV-EKLTHLEELYLYGNKLASLPSQI-GYVTNLTCLGLAENSLTSL 162
             L LS + +T +P +V   L  L+ LYL  N+L S+P  +   + +L  L L+ N LTS+
Sbjct: 550  TLYLSGNELTSVPETVFAGLASLQTLYLSSNELTSIPETVFAGLASLQYLYLSSNKLTSV 609

Query: 163  PDS-LANLQQLRVLDLRHNKLNELPMVVY-KLTSLKILYLRFNRIKTVHPDI-QYLSNLS 219
            P++  A L  L+ L L +N+L  +P  V+  L SL+ LYL +N++ +V   +   L++L 
Sbjct: 610  PETVFAGLASLQTLYLSYNELTSVPETVFNGLASLQTLYLSYNKLTSVPATVFAGLASLR 669

Query: 220  MLSMRDNKIRELPPE-LGELKNLVTLDLAHNHLEELPKEI-GNCTMLVTLDLQHNELVNI 277
             L + DNK+  +P      L +L +L L  N L  +P+ +    T L TL L  NEL ++
Sbjct: 670  SLGLYDNKLTSVPATVFAGLASLRSLSLDFNELTSIPETVFAGLTSLQTLYLYDNELTSV 729

Query: 278  PD-------------------------MLGNLINLTRLRLSYNRLESVPET-LSKCVHLN 311
            P+                         +   L ++  L LS N L SVPET  +    L 
Sbjct: 730  PETVFNGLASLQYLYLDNNKLTSIPETVFAGLASVQTLYLSGNELTSVPETVFNGLASLQ 789

Query: 312  EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
              NV    L+S+P+ +   L S+  + LS NK T+ P        S+ S+  ++N++  +
Sbjct: 790  YLNVSSNELTSVPETVFDGLASLQTLDLSYNKLTSVPETVFAGLASLRSLYLDNNELTSV 849

Query: 372  PYGIFSRAKNLSKVNMKDNLLTSLPLDL-------------------------GTWVGLT 406
            P  +F+   +L ++++  N L SL L L                            V L 
Sbjct: 850  PETVFAGLDSLWRLDLHSNRLASLALSLFYDCHDLMELYLNNNLLSGLLPGSLDGLVSLE 909

Query: 407  ELNLGTNQISKLSEDI-QNLVNLEVLVLSNNLLKKL------------------------ 441
             L L +NQ++ +S D+   L +L  L L NN L  L                        
Sbjct: 910  ALYLHSNQLADISSDVFAQLSSLTTLTLHNNRLSSLSPGAFAGLARLTTLSIHHNRLTRL 969

Query: 442  -PSSIGNLRKLKCLDLEENKLESL-PNEIGFLKELQRLILQSNQLVSLP-RAIGHLTNLS 498
             P +   L  L  LDL +N L SL    +  L  ++ L L SN+L  LP +A+ +LT L 
Sbjct: 970  SPGAFQGLSTLATLDLHDNHLTSLTAGALTGLDAMRALDLSSNKLADLPAQALHNLTGLR 1029

Query: 499  YLSVGENNLQSIPEEIGTLE---NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
             LS+ +N L S+    G LE    L  L+L+ N  L  +P  L   ++L+ + LD+ PL+
Sbjct: 1030 NLSLDDNQLTSL--SAGVLEPLAGLEYLWLSHNR-LAEVPAGLGSLASLRYLLLDHNPLT 1086

Query: 556  QIPSEIVVGGPSL 568
             +   ++   P L
Sbjct: 1087 SLDVSLLDNKPDL 1099



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 164/326 (50%), Gaps = 11/326 (3%)

Query: 259 GNCTMLVT-LDLQHNELVNIPD-MLGNLINLTRLRLSYNRLESVPET-LSKCVHLNEFNV 315
           GNCT   T +DL +  +  I + +  N  +LT +RLS N+L SVP T  +    L    +
Sbjct: 62  GNCTTTCTSVDLSYAGIRRIDEGVFNNTWSLTEIRLSGNKLTSVPATVFAGLASLQYLYL 121

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
               L+S+P+ + + L SI  + LS N+ T+ P        S+  +  ++N++  +P  +
Sbjct: 122 SSNKLTSIPETVFAGLASIRVLILSGNELTSVPETVFAGLASLQYLYLDNNKLTSVPATV 181

Query: 376 FSRAKNLSKVNMKDNLLTSLP-LDLGTWVGLTELNLGTNQISKLSEDI-QNLVNLEVLVL 433
           F+   +L  + +  N LTS+P         L  L L  N+++ + E +   L +L+ L L
Sbjct: 182 FNGLASLQTLYLSSNKLTSVPETVFNGLASLRSLYLDNNELTSVPETVFAGLASLQTLYL 241

Query: 434 SNNLLKKLPSSI-GNLRKLKCLDLEENKLESLPNEI-GFLKELQRLILQSNQLVSLPRAI 491
            +N L  +P+++   L  L+ L L  NKL S+P  +   L  L+ L L  N+L S+P  +
Sbjct: 242 YDNELTSIPATVFAGLASLQTLYLSYNKLTSVPETVFDGLASLRSLYLSYNELTSVPETV 301

Query: 492 -GHLTNLSYLSVGENNLQSIPEEI-GTLENLHTLYLNDNTCLNNIPFELAL-CSNLQIMS 548
              L +L YL +  N L S+P  +   L +L TLYL+ N  L ++P  +    ++LQ + 
Sbjct: 302 FDGLASLQYLYLSSNKLTSVPATVFAGLTSLQTLYLSGNE-LTSVPETVFTGLASLQTLY 360

Query: 549 LDNCPLSQIPSEIVVGGPSLIIRYLK 574
           L +  L+ +P  +  G  SL   YL 
Sbjct: 361 LSSNKLTSVPETVFNGLASLQTLYLS 386



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 228/501 (45%), Gaps = 53/501 (10%)

Query: 106  LDLSKSSITHLPPSV-EKLTHLEELYLYGNKLASLPSQI-GYVTNLTCLGLAENSLTSLP 163
            L L  + +T +P +V   L  ++ LYL GN+L S+P  +   + +L  L ++ N LTS+P
Sbjct: 743  LYLDNNKLTSIPETVFAGLASVQTLYLSGNELTSVPETVFNGLASLQYLNVSSNELTSVP 802

Query: 164  DSLAN-LQQLRVLDLRHNKLNELPMVVYK-LTSLKILYLRFNRIKTVHPDIQY--LSNLS 219
            +++ + L  L+ LDL +NKL  +P  V+  L SL+ LYL  N + +V P+  +  L +L 
Sbjct: 803  ETVFDGLASLQTLDLSYNKLTSVPETVFAGLASLRSLYLDNNELTSV-PETVFAGLDSLW 861

Query: 220  MLSMRDNKIRELPPEL-------------------------GELKNLVTLDLAHNHLEEL 254
             L +  N++  L   L                           L +L  L L  N L ++
Sbjct: 862  RLDLHSNRLASLALSLFYDCHDLMELYLNNNLLSGLLPGSLDGLVSLEALYLHSNQLADI 921

Query: 255  PKEI-GNCTMLVTLDLQHNELVNI-PDMLGNLINLTRLRLSYNRLESV-PETLSKCVHLN 311
              ++    + L TL L +N L ++ P     L  LT L + +NRL  + P        L 
Sbjct: 922  SSDVFAQLSSLTTLTLHNNRLSSLSPGAFAGLARLTTLSIHHNRLTRLSPGAFQGLSTLA 981

Query: 312  EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
              ++    L+SL  G L+ L ++  + LS NK    P+      T + +++ + NQ+  +
Sbjct: 982  TLDLHDNHLTSLTAGALTGLDAMRALDLSSNKLADLPAQALHNLTGLRNLSLDDNQLTSL 1041

Query: 372  PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED-IQNLVNLEV 430
              G+      L  + +  N L  +P  LG+   L  L L  N ++ L    + N  +L  
Sbjct: 1042 SAGVLEPLAGLEYLWLSHNRLAEVPAGLGSLASLRYLLLDHNPLTSLDVSLLDNKPDLRA 1101

Query: 431  LVLSNNLLKKL----PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
            L ++++  K L    PS +  L +L     ++++ +S   E+  L +L +  L    L  
Sbjct: 1102 LGVNSDAFKALSAQRPSVLETLLELWLCKSDDDQDQSAAGEL--LDKLSQ--LTGLYLFG 1157

Query: 487  LPRAIGHLTNLSYLSVG-----ENNL--QSIPEEIGTLENLHTLYLNDNTCLNNIPF-EL 538
              +++ H   LS LS       E+NL  Q  P     L +L +LYL  N  L  +P   L
Sbjct: 1158 FDQSLIHAGMLSSLSSVRVLWLEDNLLDQLPPGTFDQLPSLQSLYLIHN-GLTAVPVAAL 1216

Query: 539  ALCSNLQIMSLDNCPLSQIPS 559
            +  S L  + + N  ++++P+
Sbjct: 1217 SNLSGLTELHIVNDGITRVPA 1237



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 154/369 (41%), Gaps = 58/369 (15%)

Query: 117  PPSVEKLTHLEELYLYGNKLASL-PSQIGYVTNLTCLGLAENSLTSL-PDSLANLQQLRV 174
            P +   L  L  L ++ N+L  L P     ++ L  L L +N LTSL   +L  L  +R 
Sbjct: 947  PGAFAGLARLTTLSIHHNRLTRLSPGAFQGLSTLATLDLHDNHLTSLTAGALTGLDAMRA 1006

Query: 175  LDLRHNKLNELPM-VVYKLTSLKILYLRFNRIKTVHPDI-QYLSNLSMLSMRDNKIRELP 232
            LDL  NKL +LP   ++ LT L+ L L  N++ ++   + + L+ L  L +  N++ E+P
Sbjct: 1007 LDLSSNKLADLPAQALHNLTGLRNLSLDDNQLTSLSAGVLEPLAGLEYLWLSHNRLAEVP 1066

Query: 233  PELGELKNLVTLDLAHNHLEELPKEI-GNCTMLVTLDLQHNELVNI----PDMLGNLINL 287
              LG L +L  L L HN L  L   +  N   L  L +  +    +    P +L  L+ L
Sbjct: 1067 AGLGSLASLRYLLLDHNPLTSLDVSLLDNKPDLRALGVNSDAFKALSAQRPSVLETLLEL 1126

Query: 288  TRLRLSYNRLESVP-ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
               +   ++ +S   E L K   L    + G   S +  G+LSSL+S+  + L  N    
Sbjct: 1127 WLCKSDDDQDQSAAGELLDKLSQLTGLYLFGFDQSLIHAGMLSSLSSVRVLWLEDNLLDQ 1186

Query: 347  YPSGGPTQFTSVYSINFEHNQ------------------------IDKIPYGIFSRAKNL 382
             P G   Q  S+ S+   HN                         I ++P G F     L
Sbjct: 1187 LPPGTFDQLPSLQSLYLIHNGLTAVPVAALSNLSGLTELHIVNDGITRVPAGAFRSLSGL 1246

Query: 383  SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
              +++  NL++S+                       +E   NL N+  L LSNN L  L 
Sbjct: 1247 RTLDLSGNLISSIE----------------------AEAFDNLDNVRQLDLSNNRLVML- 1283

Query: 443  SSIGNLRKL 451
              +  LR L
Sbjct: 1284 -DVAELRGL 1291


>gi|380015607|ref|XP_003691791.1| PREDICTED: protein lap1-like [Apis florea]
          Length = 994

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 224/466 (48%), Gaps = 50/466 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE+I  L L+  ++  +PP V      LE+LYL  N++  LP  +     L  L L
Sbjct: 12  LRTQEEDICELHLNNCNLYDVPPDVFIYERTLEKLYLDANRIKDLPRPLFQCHELRVLSL 71

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           ++N +T+LP ++A+L  L  LDL  N + ELP  + +  +L+ + +  N  +     I +
Sbjct: 72  SDNEVTTLPPAIASLINLEYLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAITH 131

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           +  L  L + D  I  LP   G L  L TL+L  N+L  LPK +     L  LD+ +N+ 
Sbjct: 132 IVGLRELYINDAYIEYLPANFGRLSALKTLELRENNLMTLPKSMSRLINLQRLDIGNNDF 191

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+++G+LINLT L +  N +  +P  +++   LN F+   C +              
Sbjct: 192 TELPEVVGDLINLTELWIDGNDIRRIPLNINQLYRLNHFD---CTM-------------- 234

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                                          N I  IP  +    +++S +++  N +  
Sbjct: 235 -------------------------------NAIHIIPSEV-EGWRDISIMHLSSNEIYQ 262

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  L     +  L +  NQ++ L  DI  + NLE L+++ N L+ LPSSIG LRKL CL
Sbjct: 263 LPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSNLEELIVTKNFLEYLPSSIGLLRKLHCL 322

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           +++ N L  LP EIG    L  L L+SN L  +P  +GHL++L  L++  N ++ +P  +
Sbjct: 323 NVDNNYLRCLPPEIGSCTALSLLSLRSNNLTRVPPEVGHLSSLKVLNLVNNCIKFLPVSM 382

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
             L NL  L+L+DN     +P +        +M L    L Q P +
Sbjct: 383 LNLSNLKALWLSDNQSQPLVPLQQEFNCEEDMMVLSCFMLPQKPRQ 428



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 175/333 (52%), Gaps = 5/333 (1%)

Query: 230 ELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           ++PP++    + L  L L  N +++LP+ +  C  L  L L  NE+  +P  + +LINL 
Sbjct: 31  DVPPDVFIYERTLEKLYLDANRIKDLPRPLFQCHELRVLSLSDNEVTTLPPAIASLINLE 90

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L LS N ++ +P+++ +C +L   ++        PD + + +  +  + ++ + +  Y 
Sbjct: 91  YLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAI-THIVGLRELYIN-DAYIEYL 148

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                + +++ ++    N +  +P  + SR  NL ++++ +N  T LP  +G  + LTEL
Sbjct: 149 PANFGRLSALKTLELRENNLMTLPKSM-SRLINLQRLDIGNNDFTELPEVVGDLINLTEL 207

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
            +  N I ++  +I  L  L     + N +  +PS +   R +  + L  N++  LP+ +
Sbjct: 208 WIDGNDIRRIPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSL 267

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            +L+ +  L +  NQL +LP  IG ++NL  L V +N L+ +P  IG L  LH L + DN
Sbjct: 268 CYLRTIVTLKVDDNQLNALPNDIGQMSNLEELIVTKNFLEYLPSSIGLLRKLHCLNV-DN 326

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             L  +P E+  C+ L ++SL +  L+++P E+
Sbjct: 327 NYLRCLPPEIGSCTALSLLSLRSNNLTRVPPEV 359


>gi|421108955|ref|ZP_15569484.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410005922|gb|EKO59704.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 400

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/340 (36%), Positives = 194/340 (57%), Gaps = 6/340 (1%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L + + K++ LP E+ +LKNL  L L++N L+ LPKEIG    L  L+L HN+L  
Sbjct: 47  DVRVLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLTT 106

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L NL  L L+YN+L  +P  + +  +L   ++    L +LP  +   L ++  
Sbjct: 107 LPKEIGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLMTLPKEI-GQLKNLQT 165

Query: 337 ITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
           + L  N+ T  P   G  +   V+ +N  +NQ+  +P  I  + KNL  + + +N LT+L
Sbjct: 166 LYLWNNQLTTLPKEIGQLKNLQVFELN--NNQLTTLPEEI-GKLKNLQVLELNNNQLTTL 222

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L  L+LG NQ + L E+I  L NL+VL L +N  K +P  IG L+ L+ L 
Sbjct: 223 PKEIGQLKNLQWLDLGYNQFTILPEEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLQVLH 282

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L +N+ + +P EIG LK L+ L L  NQ   +P+ I  L NL +L++  N L ++P+EI 
Sbjct: 283 LHDNQFKIIPKEIGKLKNLKMLSLGYNQFKIIPKEIEQLQNLQWLNLDANQLTTLPKEIE 342

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            L+NL  LYL+ N     +P E+    NL+ + L+N  LS
Sbjct: 343 QLQNLQELYLSYNQ-FKTLPKEIGQLKNLKKLYLNNHQLS 381



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/358 (33%), Positives = 186/358 (51%), Gaps = 26/358 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  +E+L +L+ LYL  N+L +LP +IG + NL  L L  N LT+LP  
Sbjct: 51  LDLSEQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLTTLPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ L L +N+L  LP  + +L +L+ L+L  N++ T+  +I  L NL  L + +
Sbjct: 111 IGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLMTLPKEIGQLKNLQTLYLWN 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL   +L +N L  LP+EIG    L  L+L +N+L  +P  +G L 
Sbjct: 171 NQLTTLPKEIGQLKNLQVFELNNNQLTTLPEEIGKLKNLQVLELNNNQLTTLPKEIGQLK 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L YN+   +PE + K  +L   ++       +P   +  L ++  + L  N+F 
Sbjct: 231 NLQWLDLGYNQFTILPEEIGKLKNLQVLHLHDNQFKIIPKE-IGKLKNLQVLHLHDNQFK 289

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                             + KNL  +++  N    +P ++     L
Sbjct: 290 IIPKE-------------------------IGKLKNLKMLSLGYNQFKIIPKEIEQLQNL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
             LNL  NQ++ L ++I+ L NL+ L LS N  K LP  IG L+ LK L L  ++L S
Sbjct: 325 QWLNLDANQLTTLPKEIEQLQNLQELYLSYNQFKTLPKEIGQLKNLKKLYLNNHQLSS 382



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/309 (36%), Positives = 171/309 (55%), Gaps = 4/309 (1%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L + I N   +  LDL   +L  +P+ +  L NL RL LSYN+L+++P+ + +  +L  
Sbjct: 37  DLTEAIQNPLDVRVLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRV 96

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
             +    L++LP  +   L ++  + L+ N+ T  P+    Q  ++  ++  +NQ+  +P
Sbjct: 97  LELIHNQLTTLPKEI-GRLQNLQELYLNYNQLTILPNE-IGQLKNLQRLHLFNNQLMTLP 154

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + KNL  + + +N LT+LP ++G    L    L  NQ++ L E+I  L NL+VL 
Sbjct: 155 KEI-GQLKNLQTLYLWNNQLTTLPKEIGQLKNLQVFELNNNQLTTLPEEIGKLKNLQVLE 213

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L+NN L  LP  IG L+ L+ LDL  N+   LP EIG LK LQ L L  NQ   +P+ IG
Sbjct: 214 LNNNQLTTLPKEIGQLKNLQWLDLGYNQFTILPEEIGKLKNLQVLHLHDNQFKIIPKEIG 273

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L + +N  + IP+EIG L+NL  L L  N     IP E+    NLQ ++LD  
Sbjct: 274 KLKNLQVLHLHDNQFKIIPKEIGKLKNLKMLSLGYNQ-FKIIPKEIEQLQNLQWLNLDAN 332

Query: 553 PLSQIPSEI 561
            L+ +P EI
Sbjct: 333 QLTTLPKEI 341



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 129/222 (58%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L  + +T LP  + +L +L+   L  N+L +LP +IG + NL  L L  N LT
Sbjct: 161 KNLQTLYLWNNQLTTLPKEIGQLKNLQVFELNNNQLTTLPEEIGKLKNLQVLELNNNQLT 220

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L+ LDL +N+   LP  + KL +L++L+L  N+ K +  +I  L NL +
Sbjct: 221 TLPKEIGQLKNLQWLDLGYNQFTILPEEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLQV 280

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN+ + +P E+G+LKNL  L L +N  + +PKEI     L  L+L  N+L  +P  
Sbjct: 281 LHLHDNQFKIIPKEIGKLKNLKMLSLGYNQFKIIPKEIEQLQNLQWLNLDANQLTTLPKE 340

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           +  L NL  L LSYN+ +++P+ + +  +L +  +    LSS
Sbjct: 341 IEQLQNLQELYLSYNQFKTLPKEIGQLKNLKKLYLNNHQLSS 382



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 90/157 (57%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  +  T LP  + KL +L+ L+L+ N+   +P +IG + NL  L L +N   
Sbjct: 230 KNLQWLDLGYNQFTILPEEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLQVLHLHDNQFK 289

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            +P  +  L+ L++L L +N+   +P  + +L +L+ L L  N++ T+  +I+ L NL  
Sbjct: 290 IIPKEIGKLKNLKMLSLGYNQFKIIPKEIEQLQNLQWLNLDANQLTTLPKEIEQLQNLQE 349

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L +  N+ + LP E+G+LKNL  L L ++ L    KE
Sbjct: 350 LYLSYNQFKTLPKEIGQLKNLKKLYLNNHQLSSEEKE 386



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 2/110 (1%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           I KE  + K   +L+L  ++  I  +P  + KL +L+ L L  N+   +P +I  + NL 
Sbjct: 268 IPKEIGKLKNLQVLHLHDNQFKI--IPKEIGKLKNLKMLSLGYNQFKIIPKEIEQLQNLQ 325

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
            L L  N LT+LP  +  LQ L+ L L +N+   LP  + +L +LK LYL
Sbjct: 326 WLNLDANQLTTLPKEIEQLQNLQELYLSYNQFKTLPKEIGQLKNLKKLYL 375



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
           + L  AI +  ++  L + E  L+++P EI  L+NL  LYL+ N  L  +P E+    NL
Sbjct: 36  MDLTEAIQNPLDVRVLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQ-LKTLPKEIGQLQNL 94

Query: 545 QIMSLDNCPLSQIPSEI 561
           +++ L +  L+ +P EI
Sbjct: 95  RVLELIHNQLTTLPKEI 111


>gi|348553819|ref|XP_003462723.1| PREDICTED: protein LAP2-like isoform 3 [Cavia porcellus]
          Length = 1301

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 146/464 (31%), Positives = 217/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTALPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ I  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMIEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L  LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKESDSETQKMVLTNYMFPQQP 431



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 161/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+ +E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +  ++  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGNWKNVTVLFLHSNKLELLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 117/222 (52%), Gaps = 25/222 (11%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            + NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I
Sbjct: 53  LDANQIEELPKQLFN-CQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENI 111

Query: 423 QN-----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           +N                       L+NL  L L++  L+ LP++ G L KL+ L+L EN
Sbjct: 112 KNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELREN 171

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L+ LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ 
Sbjct: 172 QLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQ 231

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L ++ N  +  I   ++ C NLQ + L +  L Q+P  I
Sbjct: 232 LTYLDVSKNN-IEMIEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|254410565|ref|ZP_05024344.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196182771|gb|EDX77756.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1117

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 118/342 (34%), Positives = 192/342 (56%), Gaps = 3/342 (0%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE 156
           +   E +  LDLS   IT +P  + +LT+L+EL L  N++  +P  IG +TNL  L + +
Sbjct: 13  KAAREGVTELDLSGKGITEIPECIGQLTNLQELDLRENQITEIPECIGQLTNLKKLIIGK 72

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N +T +P  ++ L  LR L L  N++ E+P  + +LT+LK L L  N+I  +   I YL+
Sbjct: 73  NKITEIPGCISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQITEIPKFIGYLN 132

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           NL +L +  N+I E+P  + +L NL  L L  N + E+P+ IG  T L  L L  N++  
Sbjct: 133 NLQLLGLSRNQITEIPECISQLTNLQNLYLHDNKITEIPECIGQLTNLQNLVLIGNQITE 192

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           IP+ +G L NL  L L+ N++  +PE + K  +L      G  ++ +P+  +  L ++  
Sbjct: 193 IPEFIGKLTNLQNLGLTGNQITEIPEFIGKLTNLQLLYFGGNQITEMPE-CIGQLNNLQI 251

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L +N+ T  P     Q  ++  +N   NQI +IP  I  +  NL ++++ DN +T +P
Sbjct: 252 LNLWKNQITEMPE-CIGQLNNLQILNLWKNQITEIPECI-GQLNNLQELDLDDNKITEIP 309

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
             +G  + L EL+L  NQI+++ E I  L NL+ L+L NN L
Sbjct: 310 ECIGQLINLQELSLTENQITEIPECIGQLTNLQKLILDNNPL 351



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 186/363 (51%), Gaps = 26/363 (7%)

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
            +T L L+   +T +P+ +  L  L+ LDLR N++ E+P  + +LT+LK L +  N+I  
Sbjct: 18  GVTELDLSGKGITEIPECIGQLTNLQELDLRENQITEIPECIGQLTNLKKLIIGKNKITE 77

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
           +   I  L+NL  L + +N+I E+P  +G+L NL  L L+ N + E+PK IG    L  L
Sbjct: 78  IPGCISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQITEIPKFIGYLNNLQLL 137

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
            L  N++  IP+ +  L NL  L L  N++  +PE + +  +L    + G  ++ +P+  
Sbjct: 138 GLSRNQITEIPECISQLTNLQNLYLHDNKITEIPECIGQLTNLQNLVLIGNQITEIPE-F 196

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
           +  LT++ N+ L+ N+ T  P                             +  NL  +  
Sbjct: 197 IGKLTNLQNLGLTGNQITEIPE-------------------------FIGKLTNLQLLYF 231

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
             N +T +P  +G    L  LNL  NQI+++ E I  L NL++L L  N + ++P  IG 
Sbjct: 232 GGNQITEMPECIGQLNNLQILNLWKNQITEMPECIGQLNNLQILNLWKNQITEIPECIGQ 291

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           L  L+ LDL++NK+  +P  IG L  LQ L L  NQ+  +P  IG LTNL  L +  N L
Sbjct: 292 LNNLQELDLDDNKITEIPECIGQLINLQELSLTENQITEIPECIGQLTNLQKLILDNNPL 351

Query: 508 QSI 510
             +
Sbjct: 352 NPV 354



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 125/354 (35%), Positives = 184/354 (51%), Gaps = 26/354 (7%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           LDL    + E+P  + +LT+L+ L LR N+I  +   I  L+NL  L +  NKI E+P  
Sbjct: 22  LDLSGKGITEIPECIGQLTNLQELDLRENQITEIPECIGQLTNLKKLIIGKNKITEIPGC 81

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
           + +L NL  L L  N + E+P+ IG  T L  L L  N++  IP  +G L NL  L LS 
Sbjct: 82  ISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQITEIPKFIGYLNNLQLLGLSR 141

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
           N++  +PE +S+                        LT++ N+ L  NK T  P     Q
Sbjct: 142 NQITEIPECISQ------------------------LTNLQNLYLHDNKITEIPEC-IGQ 176

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
            T++ ++    NQI +IP  I  +  NL  + +  N +T +P  +G    L  L  G NQ
Sbjct: 177 LTNLQNLVLIGNQITEIPEFI-GKLTNLQNLGLTGNQITEIPEFIGKLTNLQLLYFGGNQ 235

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           I+++ E I  L NL++L L  N + ++P  IG L  L+ L+L +N++  +P  IG L  L
Sbjct: 236 ITEMPECIGQLNNLQILNLWKNQITEMPECIGQLNNLQILNLWKNQITEIPECIGQLNNL 295

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           Q L L  N++  +P  IG L NL  LS+ EN +  IPE IG L NL  L L++N
Sbjct: 296 QELDLDDNKITEIPECIGQLINLQELSLTENQITEIPECIGQLTNLQKLILDNN 349



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 137/252 (54%), Gaps = 4/252 (1%)

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
           + E ++ G  ++ +P+  +  LT++  + L  N+ T  P     Q T++  +    N+I 
Sbjct: 19  VTELDLSGKGITEIPE-CIGQLTNLQELDLRENQITEIPEC-IGQLTNLKKLIIGKNKIT 76

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
           +IP G  S+  NL  + + +N +T +P  +G    L +L+L  NQI+++ + I  L NL+
Sbjct: 77  EIP-GCISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQITEIPKFIGYLNNLQ 135

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR 489
           +L LS N + ++P  I  L  L+ L L +NK+  +P  IG L  LQ L+L  NQ+  +P 
Sbjct: 136 LLGLSRNQITEIPECISQLTNLQNLYLHDNKITEIPECIGQLTNLQNLVLIGNQITEIPE 195

Query: 490 AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
            IG LTNL  L +  N +  IPE IG L NL  LY   N  +  +P  +   +NLQI++L
Sbjct: 196 FIGKLTNLQNLGLTGNQITEIPEFIGKLTNLQLLYFGGNQ-ITEMPECIGQLNNLQILNL 254

Query: 550 DNCPLSQIPSEI 561
               ++++P  I
Sbjct: 255 WKNQITEMPECI 266



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 104/182 (57%), Gaps = 1/182 (0%)

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           + ++++++    +T +P  +G    L EL+L  NQI+++ E I  L NL+ L++  N + 
Sbjct: 17  EGVTELDLSGKGITEIPECIGQLTNLQELDLRENQITEIPECIGQLTNLKKLIIGKNKIT 76

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
           ++P  I  L  L+ L L EN++  +P  IG L  L++L L +NQ+  +P+ IG+L NL  
Sbjct: 77  EIPGCISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQITEIPKFIGYLNNLQL 136

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPS 559
           L +  N +  IPE I  L NL  LYL+DN  +  IP  +   +NLQ + L    +++IP 
Sbjct: 137 LGLSRNQITEIPECISQLTNLQNLYLHDNK-ITEIPECIGQLTNLQNLVLIGNQITEIPE 195

Query: 560 EI 561
            I
Sbjct: 196 FI 197



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 52/90 (57%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L+L K+ IT +P  + +L +L+EL L  NK+  +P  IG + NL  L L EN +T 
Sbjct: 271 NLQILNLWKNQITEIPECIGQLNNLQELDLDDNKITEIPECIGQLINLQELSLTENQITE 330

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYK 191
           +P+ +  L  L+ L L +N LN +    Y+
Sbjct: 331 IPECIGQLTNLQKLILDNNPLNPVVRSAYQ 360


>gi|426246387|ref|XP_004016976.1| PREDICTED: protein LAP2 [Ovis aries]
          Length = 1371

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 146/464 (31%), Positives = 217/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTALPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDISKNN------------------------IEMVEEGI-SGCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  LV++E L  S N L+ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSINELEALPSSIGQLTNVRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGNWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q   L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKTVLTNYMFPQQP 431



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 159/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S N LE++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSINELEALPSSIGQLTNVRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGNWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 117/222 (52%), Gaps = 25/222 (11%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            + NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I
Sbjct: 53  LDANQIEELPKQLFN-CQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENI 111

Query: 423 QN-----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           +N                       L+NL  L L++  L+ LP++ G L KL+ L+L EN
Sbjct: 112 KNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELREN 171

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L+ LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ 
Sbjct: 172 QLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQ 231

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L ++ N  +  +   ++ C NLQ + L +  L Q+P  I
Sbjct: 232 LTYLDISKNN-IEMVEEGISGCENLQDLLLSSNSLQQLPETI 272


>gi|348553817|ref|XP_003462722.1| PREDICTED: protein LAP2-like isoform 2 [Cavia porcellus]
          Length = 1381

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 146/464 (31%), Positives = 217/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTALPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ I  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMIEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L  LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKESDSETQKMVLTNYMFPQQP 431



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 161/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+ +E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +  ++  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGNWKNVTVLFLHSNKLELLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  I   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMIEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|328786949|ref|XP_393738.4| PREDICTED: protein lap1-like [Apis mellifera]
          Length = 990

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 224/466 (48%), Gaps = 50/466 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE+I  L L+  ++  +PP V      LE+LYL  N++  LP  +     L  L L
Sbjct: 12  LRTQEEDICELHLNNCNLYDVPPDVFIYERTLEKLYLDANRIKDLPRPLFQCHELRVLSL 71

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           ++N +T+LP ++A+L  L  LDL  N + ELP  + +  +L+ + +  N  +     I +
Sbjct: 72  SDNEVTTLPPAIASLINLEYLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAITH 131

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           +  L  L + D  I  LP   G L  L TL+L  N+L  LPK +     L  LD+ +N+ 
Sbjct: 132 IVGLRELYINDAYIEYLPANFGRLSALKTLELRENNLMTLPKSMSRLINLQRLDIGNNDF 191

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+++G+LINLT L +  N +  +P  +++   LN F+   C +              
Sbjct: 192 TELPEVVGDLINLTELWIDGNDIRRIPLNINQLYRLNHFD---CTM-------------- 234

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                                          N I  IP  +    +++S +++  N +  
Sbjct: 235 -------------------------------NAIHIIPSEV-EGWRDISIMHLSSNEIYQ 262

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  L     +  L +  NQ++ L  DI  + NLE L+++ N L+ LPSSIG LRKL CL
Sbjct: 263 LPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSNLEELIVTKNFLEYLPSSIGLLRKLHCL 322

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           +++ N L  LP EIG    L  L L+SN L  +P  +GHL++L  L++  N ++ +P  +
Sbjct: 323 NVDNNYLRCLPPEIGSCTALSLLSLRSNNLTRVPPELGHLSSLKVLNLVNNCIKFLPVSM 382

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
             L NL  L+L+DN     +P +        +M L    L Q P +
Sbjct: 383 LNLSNLKALWLSDNQSQPLVPLQQEFNCEEDMMVLSCFMLPQKPRQ 428



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 175/333 (52%), Gaps = 5/333 (1%)

Query: 230 ELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           ++PP++    + L  L L  N +++LP+ +  C  L  L L  NE+  +P  + +LINL 
Sbjct: 31  DVPPDVFIYERTLEKLYLDANRIKDLPRPLFQCHELRVLSLSDNEVTTLPPAIASLINLE 90

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L LS N ++ +P+++ +C +L   ++        PD + + +  +  + ++ + +  Y 
Sbjct: 91  YLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAI-THIVGLRELYIN-DAYIEYL 148

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                + +++ ++    N +  +P  + SR  NL ++++ +N  T LP  +G  + LTEL
Sbjct: 149 PANFGRLSALKTLELRENNLMTLPKSM-SRLINLQRLDIGNNDFTELPEVVGDLINLTEL 207

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
            +  N I ++  +I  L  L     + N +  +PS +   R +  + L  N++  LP+ +
Sbjct: 208 WIDGNDIRRIPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSL 267

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            +L+ +  L +  NQL +LP  IG ++NL  L V +N L+ +P  IG L  LH L + DN
Sbjct: 268 CYLRTIVTLKVDDNQLNALPNDIGQMSNLEELIVTKNFLEYLPSSIGLLRKLHCLNV-DN 326

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             L  +P E+  C+ L ++SL +  L+++P E+
Sbjct: 327 NYLRCLPPEIGSCTALSLLSLRSNNLTRVPPEL 359


>gi|291395454|ref|XP_002714052.1| PREDICTED: ERBB2 interacting protein [Oryctolagus cuniculus]
          Length = 1399

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 145/464 (31%), Positives = 217/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLISIEELDCSFNEVEALPSSIGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L  LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLISIEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +  ++  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGNWKNVTVLFLHSNKLELLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 117/222 (52%), Gaps = 25/222 (11%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            + NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I
Sbjct: 53  LDANQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENI 111

Query: 423 QN-----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           +N                       L+NL  L L++  L+ LP++ G L KL+ L+L EN
Sbjct: 112 KNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELREN 171

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L+ LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ 
Sbjct: 172 QLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQ 231

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L ++ N  +  +   ++ C NLQ + L +  L Q+P  I
Sbjct: 232 LTYLDVSKNN-IEMVEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|427738149|ref|YP_007057693.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
           7116]
 gi|427373190|gb|AFY57146.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
           7116]
          Length = 989

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 137/391 (35%), Positives = 217/391 (55%), Gaps = 22/391 (5%)

Query: 92  EKEFLRCKE----ENILNLDLSKSSITHLPPSVEKLTHLEELYL-------------YGN 134
           E+E L+  E    E    LDLS   +T LPP + KLT L++L L              GN
Sbjct: 3   EEELLQVIEKAAAEGWEELDLSGKGLTTLPPEIGKLTQLKKLILGKHKYDQGYIIDTIGN 62

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           KL+ LP +IG++  L  L +  N L +LP  +  L  L+ L L  N+L+ LP  + +L++
Sbjct: 63  KLSELPKEIGWLAQLEELQIIRNQLDNLPAEIVQLTNLQSLHLEENQLSSLPAEIARLSN 122

Query: 195 LKILYLRF-NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           L+ L L + N++  +  +I  LSNL  L +R NK+  LP E+ +L NL  LDL +N L  
Sbjct: 123 LQSLDLSYNNKLIGLPAEIVQLSNLQSLRLRGNKLSSLPTEVVQLSNLQNLDLRYNQLSS 182

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LP EI   + L  LDL HN+L ++P  +  L NL  L LS+N+L S+P  + +  +L   
Sbjct: 183 LPAEIAQLSNLQNLDLWHNKLSSLPAEIAQLSNLQNLDLSFNKLSSLPAEIVQLSNLQNL 242

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           ++    LS+LP  ++  L+++ ++ L+ N+  +       Q TS+ S+N  HN++  +P 
Sbjct: 243 DLRYNQLSNLPVEIV-QLSNLQSLNLTSNQLNSLLI-EIFQLTSLQSLNLSHNKLSSLPV 300

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL-VNLEVLV 432
            I  +  +L  +N+  N L+SLP ++G    L  LNL  NQ+++L  +I +L ++L+VL 
Sbjct: 301 EI-GQLNSLQSLNLSYNKLSSLPAEIGQLTCLQSLNLRNNQLNRLPTEIGHLHLHLKVLT 359

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           L NN LK LP+ I N    + L+  + +LE 
Sbjct: 360 LDNNPLKFLPAEIRNRHSQRILNFYKQQLEQ 390



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 137/403 (33%), Positives = 207/403 (51%), Gaps = 37/403 (9%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           LDL    L  LP  + KLT LK L L  ++    +          ++    NK+ ELP E
Sbjct: 21  LDLSGKGLTTLPPEIGKLTQLKKLILGKHKYDQGY----------IIDTIGNKLSELPKE 70

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
           +G L  L  L +  N L+ LP EI   T L +L L+ N+L ++P  +  L NL  L LSY
Sbjct: 71  IGWLAQLEELQIIRNQLDNLPAEIVQLTNLQSLHLEENQLSSLPAEIARLSNLQSLDLSY 130

Query: 295 N-RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
           N +L  +P  + +  +L    + G  LSSLP  ++  L+++ N+ L  N+ ++ P+    
Sbjct: 131 NNKLIGLPAEIVQLSNLQSLRLRGNKLSSLPTEVVQ-LSNLQNLDLRYNQLSSLPAE-IA 188

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q +++ +++  HN++  +P  I ++  NL  +++  N L+SLP ++     L  L+L  N
Sbjct: 189 QLSNLQNLDLWHNKLSSLPAEI-AQLSNLQNLDLSFNKLSSLPAEIVQLSNLQNLDLRYN 247

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           Q+S L  +I  L NL+ L L++N L  L   I  L  L+ L+L  NKL SLP EIG L  
Sbjct: 248 QLSNLPVEIVQLSNLQSLNLTSNQLNSLLIEIFQLTSLQSLNLSHNKLSSLPVEIGQLNS 307

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           LQ L L  N+L SLP  IG LT L  L++  N L  +P EIG L +LH            
Sbjct: 308 LQSLNLSYNKLSSLPAEIGQLTCLQSLNLRNNQLNRLPTEIGHL-HLH------------ 354

Query: 534 IPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
                     L++++LDN PL  +P+EI       I+ + K Q
Sbjct: 355 ----------LKVLTLDNNPLKFLPAEIRNRHSQRILNFYKQQ 387



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/252 (37%), Positives = 134/252 (53%), Gaps = 15/252 (5%)

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
           E ++ G  L++LP  +   LT +  + L ++K   Y  G        Y I+   N++ ++
Sbjct: 20  ELDLSGKGLTTLPPEI-GKLTQLKKLILGKHK---YDQG--------YIIDTIGNKLSEL 67

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I   A+ L ++ +  N L +LP ++     L  L+L  NQ+S L  +I  L NL+ L
Sbjct: 68  PKEIGWLAQ-LEELQIIRNQLDNLPAEIVQLTNLQSLHLEENQLSSLPAEIARLSNLQSL 126

Query: 432 VLS-NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA 490
            LS NN L  LP+ I  L  L+ L L  NKL SLP E+  L  LQ L L+ NQL SLP  
Sbjct: 127 DLSYNNKLIGLPAEIVQLSNLQSLRLRGNKLSSLPTEVVQLSNLQNLDLRYNQLSSLPAE 186

Query: 491 IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLD 550
           I  L+NL  L +  N L S+P EI  L NL  L L+ N  L+++P E+   SNLQ + L 
Sbjct: 187 IAQLSNLQNLDLWHNKLSSLPAEIAQLSNLQNLDLSFNK-LSSLPAEIVQLSNLQNLDLR 245

Query: 551 NCPLSQIPSEIV 562
              LS +P EIV
Sbjct: 246 YNQLSNLPVEIV 257



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 78/148 (52%), Gaps = 13/148 (8%)

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKLK-------------CLDLEENKLESLPNEIGFLKEL 474
            E L LS   L  LP  IG L +LK              +D   NKL  LP EIG+L +L
Sbjct: 18  WEELDLSGKGLTTLPPEIGKLTQLKKLILGKHKYDQGYIIDTIGNKLSELPKEIGWLAQL 77

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           + L +  NQL +LP  I  LTNL  L + EN L S+P EI  L NL +L L+ N  L  +
Sbjct: 78  EELQIIRNQLDNLPAEIVQLTNLQSLHLEENQLSSLPAEIARLSNLQSLDLSYNNKLIGL 137

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEIV 562
           P E+   SNLQ + L    LS +P+E+V
Sbjct: 138 PAEIVQLSNLQSLRLRGNKLSSLPTEVV 165


>gi|348553821|ref|XP_003462724.1| PREDICTED: protein LAP2-like isoform 4 [Cavia porcellus]
          Length = 1370

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 146/464 (31%), Positives = 217/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTALPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ I  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMIEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L  LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKESDSETQKMVLTNYMFPQQP 431



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 161/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+ +E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +  ++  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGNWKNVTVLFLHSNKLELLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  I   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMIEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|348553815|ref|XP_003462721.1| PREDICTED: protein LAP2-like isoform 1 [Cavia porcellus]
          Length = 1455

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 146/464 (31%), Positives = 217/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTALPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ I  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMIEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L  LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKESDSETQKMVLTNYMFPQQP 431



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 161/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+ +E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +  ++  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGNWKNVTVLFLHSNKLELLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  I   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMIEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|418701720|ref|ZP_13262642.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759284|gb|EKR25499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 356

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 119/312 (38%), Positives = 168/312 (53%), Gaps = 26/312 (8%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L +R+ K++ +P E+ +LKNL  L L  N L  LPKEIG    L  LDL  N+L  
Sbjct: 49  DVQVLILREQKLKTVPNEIEQLKNLQWLHLNTNQLTILPKEIGQLHDLQWLDLDFNQLTT 108

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L NL  L L YN+L ++P+ + +  +L   N++    ++LP      L S+  
Sbjct: 109 LPKEIGQLKNLLTLYLGYNQLTALPKEIGQLKNLQWLNLDANQFTTLPKEF-EQLQSLQK 167

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           +TL  N+F   P                             + KNL ++ + DN  T LP
Sbjct: 168 LTLGYNQFKTLPKE-------------------------IGQLKNLQELYLNDNQFTILP 202

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
                   L  LNLG NQ++ L ++I+ L NL  L L+NN L  LP  IG L  L+ LDL
Sbjct: 203 KKFEQLKNLHVLNLGYNQLTTLPKEIEQLKNLHTLYLNNNQLTALPKEIGQLHDLQWLDL 262

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+L +LP EIG LK LQ L L +NQL +LP+ IG L NL  L++  N L ++P EIG 
Sbjct: 263 GYNQLTTLPKEIGQLKNLQTLYLGNNQLTALPKEIGQLKNLQELNLWNNQLTTLPIEIGQ 322

Query: 517 LENLHTLYLNDN 528
           L+NL TLYL +N
Sbjct: 323 LQNLQTLYLRNN 334



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/291 (36%), Positives = 166/291 (57%), Gaps = 3/291 (1%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
            +++L LR  ++KTV  +I+ L NL  L +  N++  LP E+G+L +L  LDL  N L  
Sbjct: 49  DVQVLILREQKLKTVPNEIEQLKNLQWLHLNTNQLTILPKEIGQLHDLQWLDLDFNQLTT 108

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LPKEIG    L+TL L +N+L  +P  +G L NL  L L  N+  ++P+   +   L + 
Sbjct: 109 LPKEIGQLKNLLTLYLGYNQLTALPKEIGQLKNLQWLNLDANQFTTLPKEFEQLQSLQKL 168

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
            +      +LP   +  L ++  + L+ N+FT  P     Q  +++ +N  +NQ+  +P 
Sbjct: 169 TLGYNQFKTLPKE-IGQLKNLQELYLNDNQFTILPKKFE-QLKNLHVLNLGYNQLTTLPK 226

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
            I  + KNL  + + +N LT+LP ++G    L  L+LG NQ++ L ++I  L NL+ L L
Sbjct: 227 EI-EQLKNLHTLYLNNNQLTALPKEIGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYL 285

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
            NN L  LP  IG L+ L+ L+L  N+L +LP EIG L+ LQ L L++NQ 
Sbjct: 286 GNNQLTALPKEIGQLKNLQELNLWNNQLTTLPIEIGQLQNLQTLYLRNNQF 336



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 159/303 (52%), Gaps = 4/303 (1%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           EL K + N   +  L L+  +L  +P+ +  L NL  L L+ N+L  +P+ + +   L  
Sbjct: 39  ELTKALQNPLDVQVLILREQKLKTVPNEIEQLKNLQWLHLNTNQLTILPKEIGQLHDLQW 98

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            +++   L++LP  +   L ++  + L  N+ TA P     Q  ++  +N + NQ   +P
Sbjct: 99  LDLDFNQLTTLPKEI-GQLKNLLTLYLGYNQLTALPKE-IGQLKNLQWLNLDANQFTTLP 156

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
              F + ++L K+ +  N   +LP ++G    L EL L  NQ + L +  + L NL VL 
Sbjct: 157 KE-FEQLQSLQKLTLGYNQFKTLPKEIGQLKNLQELYLNDNQFTILPKKFEQLKNLHVLN 215

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L  N L  LP  I  L+ L  L L  N+L +LP EIG L +LQ L L  NQL +LP+ IG
Sbjct: 216 LGYNQLTTLPKEIEQLKNLHTLYLNNNQLTALPKEIGQLHDLQWLDLGYNQLTTLPKEIG 275

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L +G N L ++P+EIG L+NL  L L +N  L  +P E+    NLQ + L N 
Sbjct: 276 QLKNLQTLYLGNNQLTALPKEIGQLKNLQELNLWNNQ-LTTLPIEIGQLQNLQTLYLRNN 334

Query: 553 PLS 555
             S
Sbjct: 335 QFS 337



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/240 (36%), Positives = 136/240 (56%), Gaps = 1/240 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL  + +T LP  + +L +L  LYL  N+L +LP +IG + NL  L L  N  T+LP  
Sbjct: 99  LDLDFNQLTTLPKEIGQLKNLLTLYLGYNQLTALPKEIGQLKNLQWLNLDANQFTTLPKE 158

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
              LQ L+ L L +N+   LP  + +L +L+ LYL  N+   +    + L NL +L++  
Sbjct: 159 FEQLQSLQKLTLGYNQFKTLPKEIGQLKNLQELYLNDNQFTILPKKFEQLKNLHVLNLGY 218

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+ +LKNL TL L +N L  LPKEIG    L  LDL +N+L  +P  +G L 
Sbjct: 219 NQLTTLPKEIEQLKNLHTLYLNNNQLTALPKEIGQLHDLQWLDLGYNQLTTLPKEIGQLK 278

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L ++P+ + +  +L E N+    L++LP   +  L ++  + L  N+F+
Sbjct: 279 NLQTLYLGNNQLTALPKEIGQLKNLQELNLWNNQLTTLPIE-IGQLQNLQTLYLRNNQFS 337



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 155/308 (50%), Gaps = 26/308 (8%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L   KL ++P++I  + NL  L L  N LT LP  +  L  L+ LDL  N+L  LP  
Sbjct: 53  LILREQKLKTVPNEIEQLKNLQWLHLNTNQLTILPKEIGQLHDLQWLDLDFNQLTTLPKE 112

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +L  LYL +N++  +  +I  L NL  L++  N+   LP E  +L++L  L L +
Sbjct: 113 IGQLKNLLTLYLGYNQLTALPKEIGQLKNLQWLNLDANQFTTLPKEFEQLQSLQKLTLGY 172

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N  + LPKEIG    L  L L  N+   +P     L NL  L L YN+L ++P+ + +  
Sbjct: 173 NQFKTLPKEIGQLKNLQELYLNDNQFTILPKKFEQLKNLHVLNLGYNQLTTLPKEIEQ-- 230

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
                                 L +++ + L+ N+ TA P     Q   +  ++  +NQ+
Sbjct: 231 ----------------------LKNLHTLYLNNNQLTALPK-EIGQLHDLQWLDLGYNQL 267

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
             +P  I  + KNL  + + +N LT+LP ++G    L ELNL  NQ++ L  +I  L NL
Sbjct: 268 TTLPKEI-GQLKNLQTLYLGNNQLTALPKEIGQLKNLQELNLWNNQLTTLPIEIGQLQNL 326

Query: 429 EVLVLSNN 436
           + L L NN
Sbjct: 327 QTLYLRNN 334



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/248 (35%), Positives = 137/248 (55%), Gaps = 1/248 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L+ + +T LP  + +L  L+ L L  N+L +LP +IG + NL  L L  N LT
Sbjct: 71  KNLQWLHLNTNQLTILPKEIGQLHDLQWLDLDFNQLTTLPKEIGQLKNLLTLYLGYNQLT 130

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L+ L+L  N+   LP    +L SL+ L L +N+ KT+  +I  L NL  
Sbjct: 131 ALPKEIGQLKNLQWLNLDANQFTTLPKEFEQLQSLQKLTLGYNQFKTLPKEIGQLKNLQE 190

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN+   LP +  +LKNL  L+L +N L  LPKEI     L TL L +N+L  +P  
Sbjct: 191 LYLNDNQFTILPKKFEQLKNLHVLNLGYNQLTTLPKEIEQLKNLHTLYLNNNQLTALPKE 250

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L +L  L L YN+L ++P+ + +  +L    +    L++LP   +  L ++  + L 
Sbjct: 251 IGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYLGNNQLTALPKE-IGQLKNLQELNLW 309

Query: 341 RNKFTAYP 348
            N+ T  P
Sbjct: 310 NNQLTTLP 317



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 157/311 (50%), Gaps = 26/311 (8%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L +  +  +P  +E+L +L+ L+L  N+L  LP +IG + +L  L L  N LT+LP  
Sbjct: 53  LILREQKLKTVPNEIEQLKNLQWLHLNTNQLTILPKEIGQLHDLQWLDLDFNQLTTLPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L  L L +N+L  LP  + +L +L+ L L  N+  T+  + + L +L  L++  
Sbjct: 113 IGQLKNLLTLYLGYNQLTALPKEIGQLKNLQWLNLDANQFTTLPKEFEQLQSLQKLTLGY 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+ + LP E+G+LKNL  L L  N    LPK+      L  L+L +N+L  +P  +  L 
Sbjct: 173 NQFKTLPKEIGQLKNLQELYLNDNQFTILPKKFEQLKNLHVLNLGYNQLTTLPKEIEQLK 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L+ N+L ++P+ + +   L   ++    L++LP   +  L ++  + L  N+ T
Sbjct: 233 NLHTLYLNNNQLTALPKEIGQLHDLQWLDLGYNQLTTLPKE-IGQLKNLQTLYLGNNQLT 291

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           A P                             + KNL ++N+ +N LT+LP+++G    L
Sbjct: 292 ALPKE-------------------------IGQLKNLQELNLWNNQLTTLPIEIGQLQNL 326

Query: 406 TELNLGTNQIS 416
             L L  NQ S
Sbjct: 327 QTLYLRNNQFS 337



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/220 (38%), Positives = 120/220 (54%), Gaps = 7/220 (3%)

Query: 93  KEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCL 152
           KE  + K    LNLD   +  T LP   E+L  L++L L  N+  +LP +IG + NL  L
Sbjct: 134 KEIGQLKNLQWLNLD--ANQFTTLPKEFEQLQSLQKLTLGYNQFKTLPKEIGQLKNLQEL 191

Query: 153 GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
            L +N  T LP     L+ L VL+L +N+L  LP  + +L +L  LYL  N++  +  +I
Sbjct: 192 YLNDNQFTILPKKFEQLKNLHVLNLGYNQLTTLPKEIEQLKNLHTLYLNNNQLTALPKEI 251

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L +L  L +  N++  LP E+G+LKNL TL L +N L  LPKEIG    L  L+L +N
Sbjct: 252 GQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYLGNNQLTALPKEIGQLKNLQELNLWNN 311

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRL-----ESVPETLSKC 307
           +L  +P  +G L NL  L L  N+      E + + L KC
Sbjct: 312 QLTTLPIEIGQLQNLQTLYLRNNQFSIEEKERIRKLLPKC 351



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 86/145 (59%), Gaps = 1/145 (0%)

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
           +L++ +QN ++++VL+L    LK +P+ I  L+ L+ L L  N+L  LP EIG L +LQ 
Sbjct: 39  ELTKALQNPLDVQVLILREQKLKTVPNEIEQLKNLQWLHLNTNQLTILPKEIGQLHDLQW 98

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
           L L  NQL +LP+ IG L NL  L +G N L ++P+EIG L+NL  L L+ N     +P 
Sbjct: 99  LDLDFNQLTTLPKEIGQLKNLLTLYLGYNQLTALPKEIGQLKNLQWLNLDANQ-FTTLPK 157

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEI 561
           E     +LQ ++L       +P EI
Sbjct: 158 EFEQLQSLQKLTLGYNQFKTLPKEI 182



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 75/123 (60%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           ++L  ++ N   ++ L L E KL+++PNEI  LK LQ L L +NQL  LP+ IG L +L 
Sbjct: 38  RELTKALQNPLDVQVLILREQKLKTVPNEIEQLKNLQWLHLNTNQLTILPKEIGQLHDLQ 97

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           +L +  N L ++P+EIG L+NL TLYL  N  L  +P E+    NLQ ++LD    + +P
Sbjct: 98  WLDLDFNQLTTLPKEIGQLKNLLTLYLGYNQ-LTALPKEIGQLKNLQWLNLDANQFTTLP 156

Query: 559 SEI 561
            E 
Sbjct: 157 KEF 159


>gi|348553825|ref|XP_003462726.1| PREDICTED: protein LAP2-like isoform 6 [Cavia porcellus]
          Length = 1418

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 146/464 (31%), Positives = 217/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTALPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ I  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMIEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L  LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKESDSETQKMVLTNYMFPQQP 431



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 161/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+ +E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +  ++  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGNWKNVTVLFLHSNKLELLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  I   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMIEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|348553823|ref|XP_003462725.1| PREDICTED: protein LAP2-like isoform 5 [Cavia porcellus]
          Length = 1407

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 146/464 (31%), Positives = 217/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTALPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ I  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMIEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L  LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKESDSETQKMVLTNYMFPQQP 431



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 161/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+ +E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +  ++  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGNWKNVTVLFLHSNKLELLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  I   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMIEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|440796624|gb|ELR17733.1| Fbox domain containing protein [Acanthamoeba castellanii str. Neff]
          Length = 1783

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 154/482 (31%), Positives = 233/482 (48%), Gaps = 55/482 (11%)

Query: 102  NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
            N+ +L L  +S+  LPP +E L  L EL++  N+L  LP ++G +TNLT L L+ NSL S
Sbjct: 1202 NLNSLWLYTNSLKVLPPEIEHLQSLTELHMSVNQLRELPKELGKLTNLTHLDLSRNSLQS 1261

Query: 162  LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
            LP+ L  L  LR + L  N+L + P+ V KL SL+ L L  N I  +   +  L+NL +L
Sbjct: 1262 LPEELGELTNLRQILLHRNRLKQFPLFVTKLVSLERLDLDTNAITHLPESLSQLTNLVLL 1321

Query: 222  SMRDNKIRE-------------------------LPPELGELKNLVTLDLAHNHLEELPK 256
             +  N+I E                         LP E+G L  L +L+L  N L  LP 
Sbjct: 1322 DLNRNRITEAAALRPACALTSLQALFVGMNGLTALPDEIGRLTQLESLNLIENRLTALPP 1381

Query: 257  EIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE 316
             +G  T L  +   +N L ++PD LG L NL  L LS+N L +V + + +   L  F+V 
Sbjct: 1382 ALGQLTALKYVYACYNRLTSVPDELGGLTNLQSLDLSHNELRAVFD-VRRLARLEVFSVY 1440

Query: 317  GCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYS---------------- 360
               LS +P GL   LTS+  + L  N F   P    ++ ++V +                
Sbjct: 1441 KNCLSRVPPGL-GQLTSLKRLWLGINAFHTEPPPPMSELSTVAAATTTESIDEVAELRSL 1499

Query: 361  --INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS-LPLDLGTW---VGLTELNLGTNQ 414
              +N   N I  +P  + SR  NL  +++  N LT    +    W    GL  L+LG N 
Sbjct: 1500 RVLNMRGNDIHSVPEAL-SRLTNLDVLSLWRNKLTGPRAIPSSVWQSLTGLRHLHLGENN 1558

Query: 415  ISK-LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLK 472
            + + L E+I  L NL  L L  N +  LP+S+  L +L  L++  N+ E +LP  +  + 
Sbjct: 1559 LQEELPEEIGALTNLRALHLEKNGISSLPASLSRLTRLGHLNISANRFEGALPPIVLAIT 1618

Query: 473  ELQRLILQSNQLVSL---PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
             L  L +  N+   L    +A G LT L  L+ G N L+++P+E+  L  +  + +  N 
Sbjct: 1619 SLTTLDIACNRFTRLCDDDQAFGRLTKLRVLNAGNNRLEALPDELWRLPRVRCVQIKGNA 1678

Query: 530  CL 531
             L
Sbjct: 1679 PL 1680



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 160/543 (29%), Positives = 258/543 (47%), Gaps = 90/543 (16%)

Query: 101  ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
            +N++ L+L ++ +  LP  + +LT+L  L+L  N+L SLP  +  +T LT +GL  N L 
Sbjct: 1056 QNLVWLNLDENKLESLPDELGQLTNLTSLFLSYNRLTSLPDTMSRLTALTGVGLNANQLR 1115

Query: 161  SLPDS-LANLQQLRVLDLRHN--------------------------------------- 180
            SLPD+  AN + LR L    N                                       
Sbjct: 1116 SLPDTWFANARNLRELYFWRNPMLGSLAPNVDAGMAGLTALSKLNVHSCGLGTLPHSLTL 1175

Query: 181  ------------KLNEL-PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
                        KL E+ P +  +LT+L  L+L  N +K + P+I++L +L+ L M  N+
Sbjct: 1176 LTDLTYLELGGNKLAEVDPNLFVQLTNLNSLWLYTNSLKVLPPEIEHLQSLTELHMSVNQ 1235

Query: 228  IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
            +RELP ELG+L NL  LDL+ N L+ LP+E+G  T L  + L  N L   P  +  L++L
Sbjct: 1236 LRELPKELGKLTNLTHLDLSRNSLQSLPEELGELTNLRQILLHRNRLKQFPLFVTKLVSL 1295

Query: 288  TRLRLSYNRLESVPETLSKCVHLNEFNV------EGCALSSLPDGLLSSLTSINNITLSR 341
             RL L  N +  +PE+LS+  +L   ++      E  AL         +LTS+  + +  
Sbjct: 1296 ERLDLDTNAITHLPESLSQLTNLVLLDLNRNRITEAAALRP-----ACALTSLQALFVGM 1350

Query: 342  NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
            N  TA P     + T + S+N   N++  +P  +  +   L  V    N LTS+P +LG 
Sbjct: 1351 NGLTALPD-EIGRLTQLESLNLIENRLTALPPAL-GQLTALKYVYACYNRLTSVPDELGG 1408

Query: 402  WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
               L  L+L  N++  +  D++ L  LEV  +  N L ++P  +G L  LK L L  N  
Sbjct: 1409 LTNLQSLDLSHNELRAVF-DVRRLARLEVFSVYKNCLSRVPPGLGQLTSLKRLWLGINAF 1467

Query: 462  ESLP-------------------NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
             + P                   +E+  L+ L+ L ++ N + S+P A+  LTNL  LS+
Sbjct: 1468 HTEPPPPMSELSTVAAATTTESIDEVAELRSLRVLNMRGNDIHSVPEALSRLTNLDVLSL 1527

Query: 503  GENNL---QSIPEEIG-TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
              N L   ++IP  +  +L  L  L+L +N     +P E+   +NL+ + L+   +S +P
Sbjct: 1528 WRNKLTGPRAIPSSVWQSLTGLRHLHLGENNLQEELPEEIGALTNLRALHLEKNGISSLP 1587

Query: 559  SEI 561
            + +
Sbjct: 1588 ASL 1590



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 214/469 (45%), Gaps = 83/469 (17%)

Query: 145  YVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR 204
            +   +T L + ENSLT+LP  +     L  LDL+HN+L  LP                  
Sbjct: 1008 WTRTMTYLWMNENSLTALPPPVLLFTNLIELDLKHNRLTSLP------------------ 1049

Query: 205  IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTML 264
                 P I  L NL  L++ +NK+  LP ELG+L NL +L L++N L  LP  +   T L
Sbjct: 1050 -----PAISRLQNLVWLNLDENKLESLPDELGQLTNLTSLFLSYNRLTSLPDTMSRLTAL 1104

Query: 265  VTLDLQHNELVNIPD-MLGNLINLTRLRLSYNRL-----ESVPETLSKCVHLNEFNVEGC 318
              + L  N+L ++PD    N  NL  L    N +      +V   ++    L++ NV  C
Sbjct: 1105 TGVGLNANQLRSLPDTWFANARNLRELYFWRNPMLGSLAPNVDAGMAGLTALSKLNVHSC 1164

Query: 319  ALSSLPDG-----------------------LLSSLTSINNITLSRNKFTAYPSGGPTQF 355
             L +LP                         L   LT++N++ L  N     P       
Sbjct: 1165 GLGTLPHSLTLLTDLTYLELGGNKLAEVDPNLFVQLTNLNSLWLYTNSLKVLPP-EIEHL 1223

Query: 356  TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
             S+  ++   NQ+ ++P  +  +  NL+ +++  N L SLP +LG    L ++ L  N++
Sbjct: 1224 QSLTELHMSVNQLRELPKEL-GKLTNLTHLDLSRNSLQSLPEELGELTNLRQILLHRNRL 1282

Query: 416  SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK--------------- 460
             +    +  LV+LE L L  N +  LP S+  L  L  LDL  N+               
Sbjct: 1283 KQFPLFVTKLVSLERLDLDTNAITHLPESLSQLTNLVLLDLNRNRITEAAALRPACALTS 1342

Query: 461  ----------LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
                      L +LP+EIG L +L+ L L  N+L +LP A+G LT L Y+    N L S+
Sbjct: 1343 LQALFVGMNGLTALPDEIGRLTQLESLNLIENRLTALPPALGQLTALKYVYACYNRLTSV 1402

Query: 511  PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL-DNCPLSQIP 558
            P+E+G L NL +L L+ N       F++   + L++ S+  NC LS++P
Sbjct: 1403 PDELGGLTNLQSLDLSHNEL--RAVFDVRRLARLEVFSVYKNC-LSRVP 1448



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 186/405 (45%), Gaps = 55/405 (13%)

Query: 213  QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             +   ++ L M +N +  LPP +    NL+ LDL HN L  LP  I     LV L+L  N
Sbjct: 1007 HWTRTMTYLWMNENSLTALPPPVLLFTNLIELDLKHNRLTSLPPAISRLQNLVWLNLDEN 1066

Query: 273  ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
            +L ++PD LG L NLT L LSYNRL S+P+T+S+   L    +    L SLPD   ++  
Sbjct: 1067 KLESLPDELGQLTNLTSLFLSYNRLTSLPDTMSRLTALTGVGLNANQLRSLPDTWFANAR 1126

Query: 333  SINNITLSRNKFTAYPS----GGPTQFTSVYSINFEHNQIDKIPYG-------------- 374
            ++  +   RN      +     G    T++  +N     +  +P+               
Sbjct: 1127 NLRELYFWRNPMLGSLAPNVDAGMAGLTALSKLNVHSCGLGTLPHSLTLLTDLTYLELGG 1186

Query: 375  ---------IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
                     +F +  NL+ + +  N L  LP ++     LTEL++  NQ+ +L +++  L
Sbjct: 1187 NKLAEVDPNLFVQLTNLNSLWLYTNSLKVLPPEIEHLQSLTELHMSVNQLRELPKELGKL 1246

Query: 426  VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
             NL  L LS N L+ LP  +G L  L+ + L  N+L+  P  +  L  L+RL L +N + 
Sbjct: 1247 TNLTHLDLSRNSLQSLPEELGELTNLRQILLHRNRLKQFPLFVTKLVSLERLDLDTNAIT 1306

Query: 486  SLPRAIGHLTN-------------------------LSYLSVGENNLQSIPEEIGTLENL 520
             LP ++  LTN                         L  L VG N L ++P+EIG L  L
Sbjct: 1307 HLPESLSQLTNLVLLDLNRNRITEAAALRPACALTSLQALFVGMNGLTALPDEIGRLTQL 1366

Query: 521  HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGG 565
             +L L +N  L  +P  L   + L+ +      L+ +P E+  GG
Sbjct: 1367 ESLNLIENR-LTALPPALGQLTALKYVYACYNRLTSVPDEL--GG 1408



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 153/328 (46%), Gaps = 28/328 (8%)

Query: 98   CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            C   ++  L +  + +T LP  + +LT LE L L  N+L +LP  +G +T L  +    N
Sbjct: 1338 CALTSLQALFVGMNGLTALPDEIGRLTQLESLNLIENRLTALPPALGQLTALKYVYACYN 1397

Query: 158  SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
             LTS+PD L  L  L+ LDL HN+L  +   V +L  L++  +  N +  V P +  L++
Sbjct: 1398 RLTSVPDELGGLTNLQSLDLSHNELRAV-FDVRRLARLEVFSVYKNCLSRVPPGLGQLTS 1456

Query: 218  LSMLSMRDNKIRELPP-------------------ELGELKNLVTLDLAHNHLEELPKEI 258
            L  L +  N     PP                   E+ EL++L  L++  N +  +P+ +
Sbjct: 1457 LKRLWLGINAFHTEPPPPMSELSTVAAATTTESIDEVAELRSLRVLNMRGNDIHSVPEAL 1516

Query: 259  GNCTMLVTLDLQHNELVN---IP-DMLGNLINLTRLRLSYNRL-ESVPETLSKCVHLNEF 313
               T L  L L  N+L     IP  +  +L  L  L L  N L E +PE +    +L   
Sbjct: 1517 SRLTNLDVLSLWRNKLTGPRAIPSSVWQSLTGLRHLHLGENNLQEELPEEIGALTNLRAL 1576

Query: 314  NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI-- 371
            ++E   +SSLP   LS LT + ++ +S N+F           TS+ +++   N+  ++  
Sbjct: 1577 HLEKNGISSLPAS-LSRLTRLGHLNISANRFEGALPPIVLAITSLTTLDIACNRFTRLCD 1635

Query: 372  PYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
                F R   L  +N  +N L +LP +L
Sbjct: 1636 DDQAFGRLTKLRVLNAGNNRLEALPDEL 1663


>gi|456825485|gb|EMF73881.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 405

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 139/391 (35%), Positives = 212/391 (54%), Gaps = 29/391 (7%)

Query: 145 YVTNLTCLGLAEN---SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
           +V +LT     EN   S T+L ++L N  ++R+LDL  +KL  LP  + +L +L+IL   
Sbjct: 21  FVCSLTQFHAEENHKGSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSE 80

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N++ T+  +I  L NL  L +++N++  LP E+G+L+NL  L L +N L  LP+EIG  
Sbjct: 81  NNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKL 140

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L  L+L  N L  +P  +G L NL  L LS NRL  +PE + +   L + ++ G    
Sbjct: 141 QNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGG---- 196

Query: 322 SLPDGLLSSLTSINNITLSRNK-FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
                              +NK FT  P    TQ  ++  ++ + N++  +P  I  + +
Sbjct: 197 -------------------KNKPFTILPKE-ITQLQNLQELHLKFNRLTVLPKEI-GQLQ 235

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           NL  +++  N LT LP ++G    L  L+L  NQ++ L ++I  L NL+ L L  N  + 
Sbjct: 236 NLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEA 295

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
            P  I   + L+ LDL +N+L  LP EIG L+ LQ+L L  NQL +LP+ IG L  L  L
Sbjct: 296 FPKEITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESL 355

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
            +  N L ++PEEI  L+NL  LYL++N  L
Sbjct: 356 GLDHNQLATLPEEIKQLKNLKKLYLHNNPLL 386



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/353 (35%), Positives = 191/353 (54%), Gaps = 30/353 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+   + +T LP  + KL +L+EL+L  N+L +LP +IG + NL  L L  N LT
Sbjct: 72  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 131

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L+L  N+LN LP  + +L +L+ LYL  NR+  +  +I  L +L  
Sbjct: 132 TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRK 191

Query: 221 LSM--RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
           LS+  ++     LP E+ +L+NL  L L  N L  LPKEIG    L  LDL  N L  +P
Sbjct: 192 LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILP 251

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L NL  L LS N+L  +P+ +++  +L E N+E                      
Sbjct: 252 KEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLE---------------------- 289

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
              N+F A+P    TQF ++  ++   N++  +P  I  + +NL K+++  N LT+LP +
Sbjct: 290 --YNRFEAFPK-EITQFQNLQVLDLYQNRLTILPEEI-GQLQNLQKLHLSRNQLTTLPKE 345

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           +G    L  L L  NQ++ L E+I+ L NL+ L L NN L  L   I  +RKL
Sbjct: 346 IGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPL--LSEKIERIRKL 396



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 118/344 (34%), Positives = 179/344 (52%), Gaps = 25/344 (7%)

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           + +L +  +K++ LP E+G+L+NL  L+  +N L  LPKEIG    L  L LQ+N+L  +
Sbjct: 51  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 110

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P+ +G L NL  L L+ N+L ++PE + K  +L E N+    L+ LP  +   L ++  +
Sbjct: 111 PEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI-GRLQNLQEL 169

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            LS N+ T  P                         G     + LS +  K+   T LP 
Sbjct: 170 YLSLNRLTILPE----------------------EIGQLESLRKLS-LGGKNKPFTILPK 206

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++     L EL+L  N+++ L ++I  L NL +L L  N L  LP  IG L+ L  LDL 
Sbjct: 207 EITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLS 266

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
            N+L  LP EI  L+ LQ L L+ N+  + P+ I    NL  L + +N L  +PEEIG L
Sbjct: 267 GNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTILPEEIGQL 326

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +NL  L+L+ N  L  +P E+     L+ + LD+  L+ +P EI
Sbjct: 327 QNLQKLHLSRNQ-LTTLPKEIGRLQKLESLGLDHNQLATLPEEI 369



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 201/379 (53%), Gaps = 28/379 (7%)

Query: 110 KSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANL 169
           K S T+L  +++    +  L L  +KL  LP +IG + NL  L    N LT+LP  +  L
Sbjct: 35  KGSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKL 94

Query: 170 QQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR 229
           Q L+ L L++N+L  LP  + +L +LK+L+L  N++ T+  +I  L NL  L++  N++ 
Sbjct: 95  QNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLN 154

Query: 230 ELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL--QHNELVNIPDMLGNLINL 287
            LP E+G L+NL  L L+ N L  LP+EIG    L  L L  ++     +P  +  L NL
Sbjct: 155 ILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNL 214

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L L +NRL  +P+ + +  +L   ++    L+ LP   +  L ++  + LS N+ T  
Sbjct: 215 QELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKE-IGQLKNLLVLDLSGNQLTIL 273

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
           P    TQ  ++  +N E+N+ +  P  I ++ +NL  +++  N LT LP ++G    L +
Sbjct: 274 PK-EITQLQNLQELNLEYNRFEAFPKEI-TQFQNLQVLDLYQNRLTILPEEIGQLQNLQK 331

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           L+L  NQ++ L ++I                       G L+KL+ L L+ N+L +LP E
Sbjct: 332 LHLSRNQLTTLPKEI-----------------------GRLQKLESLGLDHNQLATLPEE 368

Query: 468 IGFLKELQRLILQSNQLVS 486
           I  LK L++L L +N L+S
Sbjct: 369 IKQLKNLKKLYLHNNPLLS 387



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 116/201 (57%), Gaps = 5/201 (2%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
            T LP  + +L +L+EL+L  N+L  LP +IG + NL  L L +N LT LP  +  L+ L
Sbjct: 201 FTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNL 260

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            VLDL  N+L  LP  + +L +L+ L L +NR +    +I    NL +L +  N++  LP
Sbjct: 261 LVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTILP 320

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            E+G+L+NL  L L+ N L  LPKEIG    L +L L HN+L  +P+ +  L NL +L L
Sbjct: 321 EEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYL 380

Query: 293 SYN-----RLESVPETLSKCV 308
             N     ++E + + L +C+
Sbjct: 381 HNNPLLSEKIERIRKLLPQCI 401



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 123/249 (49%), Gaps = 25/249 (10%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYV------------ 146
           K +N+  L+L  + +  LP  + +L +L+ELYL  N+L  LP +IG +            
Sbjct: 139 KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKN 198

Query: 147 -------------TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLT 193
                         NL  L L  N LT LP  +  LQ LR+LDL  N+L  LP  + +L 
Sbjct: 199 KPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLK 258

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           +L +L L  N++  +  +I  L NL  L++  N+    P E+ + +NL  LDL  N L  
Sbjct: 259 NLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTI 318

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LP+EIG    L  L L  N+L  +P  +G L  L  L L +N+L ++PE + +  +L + 
Sbjct: 319 LPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKL 378

Query: 314 NVEGCALSS 322
            +    L S
Sbjct: 379 YLHNNPLLS 387



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 24/121 (19%)

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           L  ++ N  +++ LDL  +KL+ LP EIG L+ LQ L  ++NQL +LP+ IG L NL  L
Sbjct: 41  LTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 100

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
            +  N L ++PEEIG L+NL                        +++ L+N  L+ +P E
Sbjct: 101 HLQNNQLTTLPEEIGQLQNL------------------------KVLHLNNNQLTTLPEE 136

Query: 561 I 561
           I
Sbjct: 137 I 137



 Score = 38.5 bits (88), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
            +L  A+ +   +  L +  + L+ +P+EIG L+NL  L  ++N  L  +P E+    NL
Sbjct: 39  TNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILN-SENNQLTTLPKEIGKLQNL 97

Query: 545 QIMSLDNCPLSQIPSEI 561
           Q + L N  L+ +P EI
Sbjct: 98  QELHLQNNQLTTLPEEI 114


>gi|395825406|ref|XP_003785926.1| PREDICTED: protein LAP2 isoform 3 [Otolemur garnettii]
          Length = 1303

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 216/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ I  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMIEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L ++E L  S N ++ LPSS+G L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L  LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    +  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDAETQKMVLTNYMFPQQP 431



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 159/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L ++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLEILPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 117/222 (52%), Gaps = 25/222 (11%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            + NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I
Sbjct: 53  LDANQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENI 111

Query: 423 QN-----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           +N                       L+NL  L L++  L+ LP++ G L KL+ L+L EN
Sbjct: 112 KNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELREN 171

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L+ LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ 
Sbjct: 172 QLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQ 231

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L ++ N  +  I   ++ C NLQ + L +  L Q+P  I
Sbjct: 232 LTYLDVSKNN-IEMIEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|395825402|ref|XP_003785924.1| PREDICTED: protein LAP2 isoform 1 [Otolemur garnettii]
          Length = 1372

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 216/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ I  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMIEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L ++E L  S N ++ LPSS+G L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L  LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    +  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDAETQKMVLTNYMFPQQP 431



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 159/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L ++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLEILPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 117/222 (52%), Gaps = 25/222 (11%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            + NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I
Sbjct: 53  LDANQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENI 111

Query: 423 QN-----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           +N                       L+NL  L L++  L+ LP++ G L KL+ L+L EN
Sbjct: 112 KNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELREN 171

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L+ LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ 
Sbjct: 172 QLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQ 231

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L ++ N  +  I   ++ C NLQ + L +  L Q+P  I
Sbjct: 232 LTYLDVSKNN-IEMIEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|345780094|ref|XP_539413.3| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Canis lupus familiaris]
          Length = 875

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 143/479 (29%), Positives = 246/479 (51%), Gaps = 30/479 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++S + I+H+P  + +L ++ +L+L  N + + PS +  + NL  L LA+N L  +PD+
Sbjct: 231 LNVSHNQISHIPKEISQLGNIRQLFLNNNCIENFPSGLKSLGNLEILSLAKNKLRHIPDT 290

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV----------------H 209
           L+ L+ L+VL+L +N+L   P V+  L  L  L L  N I ++                H
Sbjct: 291 LSGLKNLKVLNLEYNQLTIFPKVLCFLPKLISLILTGNLISSLPKEIRELKNLEKLLLDH 350

Query: 210 PDIQYLS-------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
             + +L+        +  L +  NK+  +  ++   K L  L L  N L+E+P++I +C 
Sbjct: 351 NKLTFLAVEIFQLLKMKELQLTGNKLEVISHKIENFKELRILILDKNLLKEVPEKISHCV 410

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           ML  L L  N+L+ +P  +  L NL +LR++ N +  +PE +S   ++      G  ++ 
Sbjct: 411 MLEYLSLSCNKLMELPKNIYKLKNLRKLRVNTNNIVRIPEDISHLNNIISLEFSGNIITD 470

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P   + +   I  + LS NK   +P  G     S+Y +NF  N I +IP  I S +K L
Sbjct: 471 IPIE-VKNCKKITKVELSYNKIMYFPV-GLCALDSLYYLNFNGNYISEIPVDI-SFSKQL 527

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + +  N L      L +   L  L+LG NQI K+   I N+V+L+VL+L  N  +  P
Sbjct: 528 LNLELNKNKLLIFSEHLCSLTNLEYLDLGKNQIRKIPPSISNMVSLQVLILCCNKFEVFP 587

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
             +  L  L+ LDL  N+++++P++I  LK +Q+L + SNQ +  P  +  L +L  L++
Sbjct: 588 IEVCTLENLQVLDLSINQIQNVPSDICNLKRIQKLNISSNQFMYFPIELCRLQSLEELNI 647

Query: 503 GENN---LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            + N   L  +PEE+  L  L  L ++DN  +  IP  +    +L  ++  N  +S +P
Sbjct: 648 SQINGRKLTRLPEELSNLTQLKRLDISDNA-IREIPRNIGELRSLVSLNAYNNQISYLP 705



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 209/416 (50%), Gaps = 10/416 (2%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           +T L   + +L  ++EL L GNKL  +  +I     L  L L +N L  +P+ +++   L
Sbjct: 353 LTFLAVEIFQLLKMKELQLTGNKLEVISHKIENFKELRILILDKNLLKEVPEKISHCVML 412

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
             L L  NKL ELP  +YKL +L+ L +  N I  +  DI +L+N+  L    N I ++P
Sbjct: 413 EYLSLSCNKLMELPKNIYKLKNLRKLRVNTNNIVRIPEDISHLNNIISLEFSGNIITDIP 472

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTM--LVTLDLQHNELVNIPDMLGNLINLTRL 290
            E+   K +  ++L++N +   P  +G C +  L  L+   N +  IP  +     L  L
Sbjct: 473 IEVKNCKKITKVELSYNKIMYFP--VGLCALDSLYYLNFNGNYISEIPVDISFSKQLLNL 530

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+ N+L    E L    +L   ++    +  +P  + S++ S+  + L  NKF  +P  
Sbjct: 531 ELNKNKLLIFSEHLCSLTNLEYLDLGKNQIRKIPPSI-SNMVSLQVLILCCNKFEVFPIE 589

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
             T   ++  ++   NQI  +P  I    K + K+N+  N     P++L     L ELN+
Sbjct: 590 VCT-LENLQVLDLSINQIQNVPSDI-CNLKRIQKLNISSNQFMYFPIELCRLQSLEELNI 647

Query: 411 GT---NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
                 ++++L E++ NL  L+ L +S+N ++++P +IG LR L  L+   N++  LP  
Sbjct: 648 SQINGRKLTRLPEELSNLTQLKRLDISDNAIREIPRNIGELRSLVSLNAYNNQISYLPPS 707

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
              L +LQ+L L  N L +LP  I +L +L  ++  +N L   P EI   + L+T+
Sbjct: 708 FLCLNDLQQLNLSGNNLTALPIGIHNLFSLKEINFDDNPLLRPPMEICKGKQLYTI 763



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 220/457 (48%), Gaps = 29/457 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + +T  P  +  L  L  L L GN ++SLP +I  + NL  L L  N LT
Sbjct: 295 KNLKVLNLEYNQLTIFPKVLCFLPKLISLILTGNLISSLPKEIRELKNLEKLLLDHNKLT 354

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L   +  L +++ L L  NKL  +   +     L+IL L  N +K V   I +   L  
Sbjct: 355 FLAVEIFQLLKMKELQLTGNKLEVISHKIENFKELRILILDKNLLKEVPEKISHCVMLEY 414

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+  NK+ ELP  + +LKNL  L +  N++  +P++I +   +++L+   N + +IP  
Sbjct: 415 LSLSCNKLMELPKNIYKLKNLRKLRVNTNNIVRIPEDISHLNNIISLEFSGNIITDIPIE 474

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           + N   +T++ LSYN++   P  L     L   N  G  +S +P  +  S   + N+ L+
Sbjct: 475 VKNCKKITKVELSYNKIMYFPVGLCALDSLYYLNFNGNYISEIPVDISFS-KQLLNLELN 533

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           +NK   + S      T++  ++   NQI KIP  I S   +L  + +  N     P+++ 
Sbjct: 534 KNKLLIF-SEHLCSLTNLEYLDLGKNQIRKIPPSI-SNMVSLQVLILCCNKFEVFPIEVC 591

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL----------------------- 437
           T   L  L+L  NQI  +  DI NL  ++ L +S+N                        
Sbjct: 592 TLENLQVLDLSINQIQNVPSDICNLKRIQKLNISSNQFMYFPIELCRLQSLEELNISQIN 651

Query: 438 ---LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
              L +LP  + NL +LK LD+ +N +  +P  IG L+ L  L   +NQ+  LP +   L
Sbjct: 652 GRKLTRLPEELSNLTQLKRLDISDNAIREIPRNIGELRSLVSLNAYNNQISYLPPSFLCL 711

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
            +L  L++  NNL ++P  I  L +L  +  +DN  L
Sbjct: 712 NDLQQLNLSGNNLTALPIGIHNLFSLKEINFDDNPLL 748



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 192/396 (48%), Gaps = 33/396 (8%)

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI---------- 258
            P I +LS+ ++ +       E    LG   +  T++L    L+E PK+I          
Sbjct: 126 QPFIGFLSHETLETTSSQLSEENQKGLGLESDNFTVNLKAKGLQEFPKDILKSKSVKYLY 185

Query: 259 --------------GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETL 304
                         G+   L  L LQ N L+++P  +    NL  L +S+N++  +P+ +
Sbjct: 186 LDGNQIKNFKGSDSGDLLGLEILSLQENGLLSLPPEIQLFHNLRILNVSHNQISHIPKEI 245

Query: 305 SKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFE 364
           S+  ++ +  +    + + P G L SL ++  ++L++NK    P    +   ++  +N E
Sbjct: 246 SQLGNIRQLFLNNNCIENFPSG-LKSLGNLEILSLAKNKLRHIPD-TLSGLKNLKVLNLE 303

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN 424
           +NQ+   P  +    K +S + +  NL++SLP ++     L +L L  N+++ L+ +I  
Sbjct: 304 YNQLTIFPKVLCFLPKLISLI-LTGNLISSLPKEIRELKNLEKLLLDHNKLTFLAVEIFQ 362

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           L+ ++ L L+ N L+ +   I N ++L+ L L++N L+ +P +I     L+ L L  N+L
Sbjct: 363 LLKMKELQLTGNKLEVISHKIENFKELRILILDKNLLKEVPEKISHCVMLEYLSLSCNKL 422

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
           + LP+ I  L NL  L V  NN+  IPE+I  L N+ +L  + N  + +IP E+  C  +
Sbjct: 423 MELPKNIYKLKNLRKLRVNTNNIVRIPEDISHLNNIISLEFSGNI-ITDIPIEVKNCKKI 481

Query: 545 QIMSLDNCPLSQIPSEIVVGGPSL-IIRYLKMQGPY 579
             + L    +   P    VG  +L  + YL   G Y
Sbjct: 482 TKVELSYNKIMYFP----VGLCALDSLYYLNFNGNY 513


>gi|124008815|ref|ZP_01693503.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123985606|gb|EAY25491.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 614

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 146/454 (32%), Positives = 237/454 (52%), Gaps = 33/454 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL  + +T +PP V  LT LEEL +  N++  LP ++G ++ L  L + +N +  LP++
Sbjct: 167 LDLGDNFLTEIPPEVGNLTLLEELNVSVNQIKHLPPELGRLSALKWLKIQQNQIVELPET 226

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
              L+ L  L L  NK  + P  + KL  LK LY+  N I+ + P++  ++ L  L M  
Sbjct: 227 FDQLENLEELRLERNKFTQFPAALLKLPKLKKLYIFDNEIEALPPEVSQMTTLEHLQMSG 286

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+++ LP E+G L  L    L +N + ELP EI     L  L L+HN+L  +P  L  L 
Sbjct: 287 NQLKSLPSEIGSLPQLKIAYLEYNEIAELPPEISQLENLEYLSLEHNKLTGLPQGLEKLE 346

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNV---EGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L L +N L  +P ++++   L E +V   EG  L++    +  SL  I  + +   
Sbjct: 347 KLEFLHLHHNNLTELPASIAQMKGLKELDVRNNEGLDLAN----VFKSLEHIETVHVQAK 402

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
           +F++ P            ++ +H Q   +P+           + +    LT LP  L   
Sbjct: 403 QFSSIP------------VDADHWQY--LPF-----------LTLDQQGLTQLPKALEQT 437

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
           V LT+L++G N+++ L E + NLV LE   +  N L KLP ++GN + +K L +  N L 
Sbjct: 438 VLLTDLSMGDNELTTLPETLGNLVKLERFNVQKNKLGKLPDALGNCKAMKWLHVGSNALT 497

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  IG L++LQ + L +NQL++LP+ I  L  L  +++  N L ++P EI  +  +  
Sbjct: 498 ELPTVIGELEDLQEVYLDNNQLMALPKEIKDLKKLMVVNLANNQLTTLPTEITEIPYIQY 557

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ 556
           LYLN+N  L ++P  +     LQ ++L   P+S+
Sbjct: 558 LYLNNNQ-LTDLPEGIENWVVLQELNLKGNPMSE 590



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 202/445 (45%), Gaps = 55/445 (12%)

Query: 169 LQQLRVLDLRHNKLNELPMV---VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L+ ++ ++L      E P V   + ++  L+ + L  N + T+   + +L NL +L++  
Sbjct: 66  LEDIKEIELAGQDFTEKPEVLQNIERMFGLEKINLSSNFLSTIPFGLTHLRNLKVLNLYQ 125

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++ +LP  +  L+NL  L+L  N     P      T L +LDL  N L  IP  +GNL 
Sbjct: 126 NRLGKLPDAVLNLRNLEVLNLGKNGFHRFPDHFDKLTSLKSLDLGDNFLTEIPPEVGNLT 185

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L +S N+++ +P  L +   L    ++   +  LP+     L ++  + L RNKFT
Sbjct: 186 LLEELNVSVNQIKHLPPELGRLSALKWLKIQQNQIVELPET-FDQLENLEELRLERNKFT 244

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P+             F+ N+I+ +P  + S+   L  + M  N L SLP ++G+   L
Sbjct: 245 QFPAALLKLPKLKKLYIFD-NEIEALPPEV-SQMTTLEHLQMSGNQLKSLPSEIGSLPQL 302

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
               L  N+I++L  +I  L NLE L L +N L  LP  +  L KL+ L L  N L  LP
Sbjct: 303 KIAYLEYNEIAELPPEISQLENLEYLSLEHNKLTGLPQGLEKLEKLEFLHLHHNNLTELP 362

Query: 466 NEIGFLKELQRLILQSNQ------------------------------------------ 483
             I  +K L+ L +++N+                                          
Sbjct: 363 ASIAQMKGLKELDVRNNEGLDLANVFKSLEHIETVHVQAKQFSSIPVDADHWQYLPFLTL 422

Query: 484 ----LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
               L  LP+A+     L+ LS+G+N L ++PE +G L  L    +  N  L  +P  L 
Sbjct: 423 DQQGLTQLPKALEQTVLLTDLSMGDNELTTLPETLGNLVKLERFNVQKNK-LGKLPDALG 481

Query: 540 LCSNLQIMSLDNCPLSQIPSEIVVG 564
            C  ++ + + +  L+++P+  V+G
Sbjct: 482 NCKAMKWLHVGSNALTELPT--VIG 504



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 102/195 (52%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E+I  + +     + +P   +   +L  L L    L  LP  +     LT L + +N LT
Sbjct: 392 EHIETVHVQAKQFSSIPVDADHWQYLPFLTLDQQGLTQLPKALEQTVLLTDLSMGDNELT 451

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP++L NL +L   +++ NKL +LP  +    ++K L++  N +  +   I  L +L  
Sbjct: 452 TLPETLGNLVKLERFNVQKNKLGKLPDALGNCKAMKWLHVGSNALTELPTVIGELEDLQE 511

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           + + +N++  LP E+ +LK L+ ++LA+N L  LP EI     +  L L +N+L ++P+ 
Sbjct: 512 VYLDNNQLMALPKEIKDLKKLMVVNLANNQLTTLPTEITEIPYIQYLYLNNNQLTDLPEG 571

Query: 281 LGNLINLTRLRLSYN 295
           + N + L  L L  N
Sbjct: 572 IENWVVLQELNLKGN 586


>gi|355686423|gb|AER98051.1| erbb2 interacting protein [Mustela putorius furo]
          Length = 1093

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 144/461 (31%), Positives = 216/461 (46%), Gaps = 50/461 (10%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L +N
Sbjct: 1   EEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDN 60

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            LT+LP S+ANL  LR LD+  N + E P                        +I+    
Sbjct: 61  DLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKNCKV 97

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L  +
Sbjct: 98  LTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 157

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +  +
Sbjct: 158 PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQLTYL 216

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            +S+N                         I+ I  GI S  +NL  + +  N L  LP 
Sbjct: 217 DVSKNN------------------------IEMIEEGI-SACENLQDLLLSSNSLQQLPE 251

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
            +G+   +T L +  NQ+  L + I  LV++E L  S N ++ LPSS+G L  ++    +
Sbjct: 252 TIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSVGQLTNIRTFAAD 311

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
            N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P     L
Sbjct: 312 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 371

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           + L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 372 QQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 412



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 77  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 136

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 137 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 196

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 197 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSL 256

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 257 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQ 316

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 317 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 372

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 373 QLTAMWLSDN 382



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 117/222 (52%), Gaps = 25/222 (11%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            + NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I
Sbjct: 34  LDANQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENI 92

Query: 423 QN-----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           +N                       L+NL  L L++  L+ LP++ G L KL+ L+L EN
Sbjct: 93  KNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELREN 152

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L+ LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ 
Sbjct: 153 QLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQ 212

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L ++ N  +  I   ++ C NLQ + L +  L Q+P  I
Sbjct: 213 LTYLDVSKNN-IEMIEEGISACENLQDLLLSSNSLQQLPETI 253


>gi|395825404|ref|XP_003785925.1| PREDICTED: protein LAP2 isoform 2 [Otolemur garnettii]
          Length = 1420

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 216/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ I  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMIEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L ++E L  S N ++ LPSS+G L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L  LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    +  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDAETQKMVLTNYMFPQQP 431



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 159/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L ++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLEILPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  I   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMIEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|363737250|ref|XP_422802.3| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like [Gallus gallus]
          Length = 579

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 151/505 (29%), Positives = 258/505 (51%), Gaps = 17/505 (3%)

Query: 79  TKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLAS 138
           T +++P+      E    R   + I  +DL+   +  +   V +L  LEEL++  N + +
Sbjct: 25  TAQEQPMNEVPENEALIPRHPTDRIFFIDLANKHLKTISAEVFRLEDLEELHVEKNLIVN 84

Query: 139 LPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL 198
           +P +I  + N+  L L  N +  + + L  L+ +  LDL +N L+   ++V  ++SL+ L
Sbjct: 85  IPKEIKLLKNMKVLYLDHNHIRDVCEELGMLKNILSLDLSNNPLSYSSLLV--ISSLQSL 142

Query: 199 Y-LRFNRIKTVHPDIQ---YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           + LR  +I      +Q   YL  + +L + DN ++ LP E+  LK L  + L +N  E  
Sbjct: 143 HQLRLYQINLYEIPVQICKYLHLIELLGLSDNNLQCLPKEIVNLKKLKEIYLRNNRFENF 202

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P E+     L  +DL+ N + +IP+ +G+L NL +L L+ N+L S+P TL  C  L   +
Sbjct: 203 PIELSKIVSLEIIDLEQNLISHIPEEIGSLTNLVKLFLASNKLSSIPPTLRHCQKLAVLD 262

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIP 372
           +    L  LP  +L +LT    + LS N     P+  G     T VY  N   +++ +  
Sbjct: 263 LSHNPLHKLPP-VLKNLTGKRELGLSGNSLEEPPAQTGSWASLTHVYLRNTGLHKVHRS- 320

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
              F+R  ++  +++ +N    +P  + +   L  LNL  NQI ++  +IQ L NL+ L 
Sbjct: 321 ---FTRLTSIRVLDLSENCFDEIPKGICSMKNLEILNLDDNQIQEIPAEIQELTNLKCLS 377

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENK---LESLPNEIGFLKELQRLILQSNQLVSLPR 489
           LS N     P  I  +  L+ L L +NK   L SLP +I  L+ L+ L +++N L  LP 
Sbjct: 378 LSQNQFNSFPMEILLVESLEKLYLGQNKGIKLTSLPEDIIKLQNLKELHIENNGLERLPP 437

Query: 490 AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
           A+G LT+L  L    N L+ +PE +G ++ L  L + +N  L+ +   L     LQ++ +
Sbjct: 438 AVGSLTHLKVLDCHNNLLKKLPESLGQIQGLQKLLVQNNQ-LSRLSERLGSLKQLQVVLV 496

Query: 550 DNCPLSQIPSEIVVGGPSLIIRYLK 574
           D  P++  P E+   G + I++YL+
Sbjct: 497 DGNPMTDPPIEVCRHGTTAILQYLQ 521



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 55/267 (20%)

Query: 345 TAYPSGGPTQFTS----------------------------VYSINFEHNQIDKIPYGIF 376
           T YP G P  F                              ++ I+  +  +  I   +F
Sbjct: 8   THYPKGDPVGFEDNHVMTAQEQPMNEVPENEALIPRHPTDRIFFIDLANKHLKTISAEVF 67

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
            R ++L +++++ NL+ ++P ++     +  L L  N I  + E++  L N+  L LSNN
Sbjct: 68  -RLEDLEELHVEKNLIVNIPKEIKLLKNMKVLYLDHNHIRDVCEELGMLKNILSLDLSNN 126

Query: 437 LLKK----LPSSIGNLRKLK-------------C--------LDLEENKLESLPNEIGFL 471
            L      + SS+ +L +L+             C        L L +N L+ LP EI  L
Sbjct: 127 PLSYSSLLVISSLQSLHQLRLYQINLYEIPVQICKYLHLIELLGLSDNNLQCLPKEIVNL 186

Query: 472 KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
           K+L+ + L++N+  + P  +  + +L  + + +N +  IPEEIG+L NL  L+L  N  L
Sbjct: 187 KKLKEIYLRNNRFENFPIELSKIVSLEIIDLEQNLISHIPEEIGSLTNLVKLFLASNK-L 245

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIP 558
           ++IP  L  C  L ++ L + PL ++P
Sbjct: 246 SSIPPTLRHCQKLAVLDLSHNPLHKLP 272


>gi|124007624|ref|ZP_01692328.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
 gi|123986922|gb|EAY26687.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
          Length = 440

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/359 (35%), Positives = 201/359 (55%), Gaps = 3/359 (0%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR 229
           Q L   DL    L+ LP  V +L +L+ L L  N I+ +   I+ L  L  L ++ N++ 
Sbjct: 64  QTLIACDLSDKNLDRLPDEVTQLVTLQQLDLSNNNIEHLSQKIRQLKQLKKLDLQGNELA 123

Query: 230 ELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTR 289
           +LPP + +L  L  L L +N+L +LP  +GN T L  L++ +N+L  +P  +G L +L +
Sbjct: 124 QLPPIVEQLTGLEELILGYNYLTQLPGSVGNLTQLKVLEVHNNDLFRLPSTIGKLTSLIK 183

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS 349
           L LSYN+L  + +     V+L + N++   LS LP  +   LT++  + LS N     P+
Sbjct: 184 LNLSYNQLSELSKMTENLVNLQQLNLQHNQLSQLPMAI-GQLTALQKLVLSGNNMNVLPA 242

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
               Q TS+  ++   N ++++P  I  + K+L+++ +  N L  LP+++     L +L 
Sbjct: 243 N-IEQLTSLKHLSLGGNTLEQLPPTI-CKLKSLTELFLDYNYLQQLPIEIKYLKHLQKLE 300

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           L  N++ +L  +I  L  L+ L L  NLL KLP  IG L  L+ L + +NKL ++P  +G
Sbjct: 301 LSYNELKELPAEIGQLTQLKQLNLGQNLLTKLPPEIGQLNCLENLWVYQNKLTNIPPTVG 360

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            L  LQR +L +NQL SLP  IGHL++LS LS+  N L ++P EI  L  L +L L  N
Sbjct: 361 QLTALQRFMLSNNQLTSLPIEIGHLSHLSTLSLENNQLATLPLEIKQLSKLKSLQLTGN 419



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 174/351 (49%), Gaps = 27/351 (7%)

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           ++ Y   L    + D  +  LP E+ +L  L  LDL++N++E L ++I     L  LDLQ
Sbjct: 59  EVLYCQTLIACDLSDKNLDRLPDEVTQLVTLQQLDLSNNNIEHLSQKIRQLKQLKKLDLQ 118

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
            NEL  +P ++  L  L  L L YN L  +P ++     L    V    L  LP  +   
Sbjct: 119 GNELAQLPPIVEQLTGLEELILGYNYLTQLPGSVGNLTQLKVLEVHNNDLFRLPSTI--- 175

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
                                  + TS+  +N  +NQ+ ++   +     NL ++N++ N
Sbjct: 176 ----------------------GKLTSLIKLNLSYNQLSELS-KMTENLVNLQQLNLQHN 212

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP+ +G    L +L L  N ++ L  +I+ L +L+ L L  N L++LP +I  L+ 
Sbjct: 213 QLSQLPMAIGQLTALQKLVLSGNNMNVLPANIEQLTSLKHLSLGGNTLEQLPPTICKLKS 272

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L  L L+ N L+ LP EI +LK LQ+L L  N+L  LP  IG LT L  L++G+N L  +
Sbjct: 273 LTELFLDYNYLQQLPIEIKYLKHLQKLELSYNELKELPAEIGQLTQLKQLNLGQNLLTKL 332

Query: 511 PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           P EIG L  L  L++  N  L NIP  +   + LQ   L N  L+ +P EI
Sbjct: 333 PPEIGQLNCLENLWVYQNK-LTNIPPTVGQLTALQRFMLSNNQLTSLPIEI 382



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 117/346 (33%), Positives = 183/346 (52%), Gaps = 5/346 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS ++I HL   + +L  L++L L GN+LA LP  +  +T L  L L  N LT LP S
Sbjct: 92  LDLSNNNIEHLSQKIRQLKQLKKLDLQGNELAQLPPIVEQLTGLEELILGYNYLTQLPGS 151

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + NL QL+VL++ +N L  LP  + KLTSL  L L +N++  +    + L NL  L+++ 
Sbjct: 152 VGNLTQLKVLEVHNNDLFRLPSTIGKLTSLIKLNLSYNQLSELSKMTENLVNLQQLNLQH 211

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++ +LP  +G+L  L  L L+ N++  LP  I   T L  L L  N L  +P  +  L 
Sbjct: 212 NQLSQLPMAIGQLTALQKLVLSGNNMNVLPANIEQLTSLKHLSLGGNTLEQLPPTICKLK 271

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +LT L L YN L+ +P  +    HL +  +    L  LP   +  LT +  + L +N  T
Sbjct: 272 SLTELFLDYNYLQQLPIEIKYLKHLQKLELSYNELKELPAE-IGQLTQLKQLNLGQNLLT 330

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q   + ++    N++  IP  +  +   L +  + +N LTSLP+++G    L
Sbjct: 331 KLPP-EIGQLNCLENLWVYQNKLTNIPPTV-GQLTALQRFMLSNNQLTSLPIEIGHLSHL 388

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           + L+L  NQ++ L  +I+ L  L+ L L+ N + +  S I   RKL
Sbjct: 389 STLSLENNQLATLPLEIKQLSKLKSLQLTGNPMAQ--SEIEKARKL 432



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 129/222 (58%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ L+LS + ++ L    E L +L++L L  N+L+ LP  IG +T L  L L+ N++  L
Sbjct: 181 LIKLNLSYNQLSELSKMTENLVNLQQLNLQHNQLSQLPMAIGQLTALQKLVLSGNNMNVL 240

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P ++  L  L+ L L  N L +LP  + KL SL  L+L +N ++ +  +I+YL +L  L 
Sbjct: 241 PANIEQLTSLKHLSLGGNTLEQLPPTICKLKSLTELFLDYNYLQQLPIEIKYLKHLQKLE 300

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N+++ELP E+G+L  L  L+L  N L +LP EIG    L  L +  N+L NIP  +G
Sbjct: 301 LSYNELKELPAEIGQLTQLKQLNLGQNLLTKLPPEIGQLNCLENLWVYQNKLTNIPPTVG 360

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
            L  L R  LS N+L S+P  +    HL+  ++E   L++LP
Sbjct: 361 QLTALQRFMLSNNQLTSLPIEIGHLSHLSTLSLENNQLATLP 402



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 89/152 (58%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           CK +++  L L  + +  LP  ++ L HL++L L  N+L  LP++IG +T L  L L +N
Sbjct: 268 CKLKSLTELFLDYNYLQQLPIEIKYLKHLQKLELSYNELKELPAEIGQLTQLKQLNLGQN 327

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            LT LP  +  L  L  L +  NKL  +P  V +LT+L+   L  N++ ++  +I +LS+
Sbjct: 328 LLTKLPPEIGQLNCLENLWVYQNKLTNIPPTVGQLTALQRFMLSNNQLTSLPIEIGHLSH 387

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHN 249
           LS LS+ +N++  LP E+ +L  L +L L  N
Sbjct: 388 LSTLSLENNQLATLPLEIKQLSKLKSLQLTGN 419


>gi|426227298|ref|XP_004007755.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Ovis aries]
          Length = 870

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 246/479 (51%), Gaps = 30/479 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++S + I+H+P  + +L ++ EL+L  N +   PS +  + NL  L LA+N L  +PD+
Sbjct: 226 LNVSYNQISHIPKEISQLGNIRELFLNNNCIEDFPSGLESLKNLEILNLAKNKLRHVPDA 285

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV----------------H 209
           L++L+ LR L+L +N+L   P  +  L  L  L L  N I ++                H
Sbjct: 286 LSSLKNLRALNLEYNQLTIFPKALCFLPKLISLNLTGNLINSLPKEIKELKNLEKLLLDH 345

Query: 210 PDIQYLS-------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
             + +L+        +  L + DNK+  +  ++   K L  L L  N L+++P+ I +C 
Sbjct: 346 NKLTFLAVEIFLLLRMKELQLTDNKLEVISNKIENFKELRILMLDKNLLKDMPENISHCA 405

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           +L  L L  N+L  +P  +  L NL +L ++ N L  +PE +S   ++      G  ++ 
Sbjct: 406 VLECLSLSDNKLTELPKNIHKLKNLRKLHINRNYLVKIPEYISHLNNMFSLEFSGNFITD 465

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
            P   + +  +I  + LS NK   +P  G     S+Y ++F  N I +IP  I S  K L
Sbjct: 466 FPIE-IKNCKNIAKVELSYNKIMYFPL-GLCALDSLYYLSFTGNYISEIPVDI-SFNKQL 522

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + + +N L      L + + L  L+LG N+I K+   I N+V+L VL+L  N L+  P
Sbjct: 523 LHLELNENKLLIFSEHLCSLINLEYLDLGKNKIRKIPPSISNMVSLHVLILCYNKLETFP 582

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
           + +  L  L+ LDL EN+++++P+EI  LK +Q+L + +NQ +  P  + HL +L  L++
Sbjct: 583 TEVCALDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNNQFIYFPVELCHLQSLEELNI 642

Query: 503 GENN---LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            + N   L  +PEE+  +  L  L +++N  +  +P  +    +L  ++ DN  +  +P
Sbjct: 643 SQINGKKLTRLPEELSNMTKLTRLDISNN-AIREMPTNIGELRSLVSLNADNNQIRSLP 700



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 206/431 (47%), Gaps = 34/431 (7%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLA 155
           LR KE     L L+ + +  +   +E    L  L L  N L  +P  I +   L CL L+
Sbjct: 359 LRMKE-----LQLTDNKLEVISNKIENFKELRILMLDKNLLKDMPENISHCAVLECLSLS 413

Query: 156 ENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYL 215
           +N LT LP ++  L+ LR L +  N L ++P  +  L ++  L    N I     +I+  
Sbjct: 414 DNKLTELPKNIHKLKNLRKLHINRNYLVKIPEYISHLNNMFSLEFSGNFITDFPIEIKNC 473

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
            N++ + +  NKI   P  L  L +L  L    N++ E+P +I     L+ L+L  N+L+
Sbjct: 474 KNIAKVELSYNKIMYFPLGLCALDSLYYLSFTGNYISEIPVDISFNKQLLHLELNENKLL 533

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
              + L +LINL  L L  N++  +P ++S  V                        S++
Sbjct: 534 IFSEHLCSLINLEYLDLGKNKIRKIPPSISNMV------------------------SLH 569

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + L  NK   +P+       ++  ++   NQI  IP  I    K + K+N+ +N     
Sbjct: 570 VLILCYNKLETFPTE-VCALDNLRVLDLSENQIQTIPSEI-CNLKGIQKLNISNNQFIYF 627

Query: 396 PLDLGTWVGLTELNLGT---NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
           P++L     L ELN+      ++++L E++ N+  L  L +SNN ++++P++IG LR L 
Sbjct: 628 PVELCHLQSLEELNISQINGKKLTRLPEELSNMTKLTRLDISNNAIREMPTNIGELRSLV 687

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
            L+ + N++ SLP     L  LQ+L L  N L  LP  I +L +L  ++  +N L   P 
Sbjct: 688 SLNADNNQIRSLPPSFLSLNALQQLNLSGNNLSVLPSGIYNLFSLKEINFDDNPLLRPPM 747

Query: 513 EIGTLENLHTL 523
           EI   + L+T+
Sbjct: 748 EICKGKQLYTI 758



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 222/474 (46%), Gaps = 50/474 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+L+K+ + H+P ++  L +L  L L  N+L   P  + ++  L  L L  N + SLP  
Sbjct: 272 LNLAKNKLRHVPDALSSLKNLRALNLEYNQLTIFPKALCFLPKLISLNLTGNLINSLPKE 331

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKL-----------------------TSLKILYLRF 202
           +  L+ L  L L HNKL  L + ++ L                         L+IL L  
Sbjct: 332 IKELKNLEKLLLDHNKLTFLAVEIFLLLRMKELQLTDNKLEVISNKIENFKELRILMLDK 391

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N +K +  +I + + L  LS+ DNK+ ELP  + +LKNL  L +  N+L ++P+ I +  
Sbjct: 392 NLLKDMPENISHCAVLECLSLSDNKLTELPKNIHKLKNLRKLHINRNYLVKIPEYISHLN 451

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            + +L+   N + + P  + N  N+ ++ LSYN++   P  L     L   +  G  +S 
Sbjct: 452 NMFSLEFSGNFITDFPIEIKNCKNIAKVELSYNKIMYFPLGLCALDSLYYLSFTGNYISE 511

Query: 323 LPDGL----------------------LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYS 360
           +P  +                      L SL ++  + L +NK    P    +   S++ 
Sbjct: 512 IPVDISFNKQLLHLELNENKLLIFSEHLCSLINLEYLDLGKNKIRKIPPS-ISNMVSLHV 570

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
           +   +N+++  P  + +   NL  +++ +N + ++P ++    G+ +LN+  NQ      
Sbjct: 571 LILCYNKLETFPTEVCA-LDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNNQFIYFPV 629

Query: 421 DIQNLVNLEVLVLSN---NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           ++ +L +LE L +S      L +LP  + N+ KL  LD+  N +  +P  IG L+ L  L
Sbjct: 630 ELCHLQSLEELNISQINGKKLTRLPEELSNMTKLTRLDISNNAIREMPTNIGELRSLVSL 689

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
              +NQ+ SLP +   L  L  L++  NNL  +P  I  L +L  +  +DN  L
Sbjct: 690 NADNNQIRSLPPSFLSLNALQQLNLSGNNLSVLPSGIYNLFSLKEINFDDNPLL 743


>gi|390355646|ref|XP_003728599.1| PREDICTED: leucine-rich repeat protein SHOC-2-like
           [Strongylocentrotus purpuratus]
          Length = 643

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 147/463 (31%), Positives = 225/463 (48%), Gaps = 28/463 (6%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLT-----HLEELYLYGNKLASLPSQIGYV-TNLT 150
           + KEE    +DL    ++H      ++      ++ EL L  N L++LP+ I  V   + 
Sbjct: 15  KGKEEIGEAVDLESQGLSHFDIGALRVAGTCIRNITELNLNYNSLSTLPNDIASVLPRIQ 74

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L+ N L  LP  L +L++LR L    N+++ LP+ ++ L  L+ L+L  NR+K + P
Sbjct: 75  ILCLSGNDLKELPAVLGSLEELRSLSANENEISLLPVSLFHLPKLEDLHLLGNRLKQLSP 134

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           DI +L  L  L++ DN++ + P   G+L++L TL+ + N+LE LPK  GN   L  L++ 
Sbjct: 135 DICHLKTLRNLTLEDNQLCDFPSTFGDLESLHTLEASENNLEALPKNFGNLRNLAVLNVS 194

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRL-ESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
            N+L+ +PD  G+L +L  + LS N L E  P   S    L +F+     L   P   + 
Sbjct: 195 RNKLLELPDSFGDLPSLQYVDLSNNYLPELTPRLASASRCLVKFSAADNLLKRFP-PWIG 253

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH-----NQIDKIP--YGIFSRAKNL 382
            LT I  I L  N         P  F +V      H     N +D +P  +G+    + L
Sbjct: 254 ELTHIQEIYLGNNYIEHEL---PEHFGTVSGNTLRHMDVGANFLDHLPSSFGLLRNVETL 310

Query: 383 S----------KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
                      +     N +T LP   G  + L  L L  N ++ L E   +L  LE   
Sbjct: 311 HFGSHIMEIERRAFQNGNRITHLPESFGLMLNLRHLRLDENSLNCLPESFGDLYALEYFD 370

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           +  N+L+KLP+S   L  LK   L +N +E LP + G L+ L+RL +  NQL  LP +  
Sbjct: 371 VGQNVLRKLPASFSRLGSLKTCLLSKNNIERLPEDFGNLRSLERLRINRNQLRELPASFN 430

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
            L NL  L + EN L+  P  +  L NL  + L+DN    +IP
Sbjct: 431 QLVNLQTLDLVENRLREFPACLNQLTNLVRVALDDNDFELDIP 473



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 147/348 (42%), Gaps = 26/348 (7%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C  + + NL L  + +   P +   L  L  L    N L +LP   G + NL  L ++ N
Sbjct: 137 CHLKTLRNLTLEDNQLCDFPSTFGDLESLHTLEASENNLEALPKNFGNLRNLAVLNVSRN 196

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF----NRIKTVHPDIQ 213
            L  LPDS  +L  L+ +DL +N    LP +  +L S     ++F    N +K   P I 
Sbjct: 197 KLLELPDSFGDLPSLQYVDLSNNY---LPELTPRLASASRCLVKFSAADNLLKRFPPWIG 253

Query: 214 YLSNLSMLSMRDNKI-RELPPELGELKN--LVTLDLAHNHLEELPKEIGNCTMLVTLDL- 269
            L+++  + + +N I  ELP   G +    L  +D+  N L+ LP   G    + TL   
Sbjct: 254 ELTHIQEIYLGNNYIEHELPEHFGTVSGNTLRHMDVGANFLDHLPSSFGLLRNVETLHFG 313

Query: 270 ------------QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
                         N + ++P+  G ++NL  LRL  N L  +PE+      L  F+V  
Sbjct: 314 SHIMEIERRAFQNGNRITHLPESFGLMLNLRHLRLDENSLNCLPESFGDLYALEYFDVGQ 373

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             L  LP    S L S+    LS+N     P        S+  +    NQ+ ++P   F+
Sbjct: 374 NVLRKLP-ASFSRLGSLKTCLLSKNNIERLPEDF-GNLRSLERLRINRNQLRELPAS-FN 430

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           +  NL  +++ +N L   P  L     L  + L  N       ++ NL
Sbjct: 431 QLVNLQTLDLVENRLREFPACLNQLTNLVRVALDDNDFELDIPEVNNL 478



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 31/278 (11%)

Query: 314 NVEGCALSSLPDGLLS-SLTSINNIT---LSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
           ++E   LS    G L  + T I NIT   L+ N  +  P+   +    +  +    N + 
Sbjct: 25  DLESQGLSHFDIGALRVAGTCIRNITELNLNYNSLSTLPNDIASVLPRIQILCLSGNDLK 84

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
           ++P  +    + L  ++  +N ++ LP+ L     L +L+L  N++ +LS DI +L  L 
Sbjct: 85  ELP-AVLGSLEELRSLSANENEISLLPVSLFHLPKLEDLHLLGNRLKQLSPDICHLKTLR 143

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR 489
            L L +N L   PS+ G+L  L  L+  EN LE+LP   G L+ L  L +  N+L+ LP 
Sbjct: 144 NLTLEDNQLCDFPSTFGDLESLHTLEASENNLEALPKNFGNLRNLAVLNVSRNKLLELPD 203

Query: 490 AIGHLTNLSY------------------------LSVGENNLQSIPEEIGTLENLHTLYL 525
           + G L +L Y                         S  +N L+  P  IG L ++  +YL
Sbjct: 204 SFGDLPSLQYVDLSNNYLPELTPRLASASRCLVKFSAADNLLKRFPPWIGELTHIQEIYL 263

Query: 526 NDNTCLNNIPFELALCSN--LQIMSLDNCPLSQIPSEI 561
            +N   + +P      S   L+ M +    L  +PS  
Sbjct: 264 GNNYIEHELPEHFGTVSGNTLRHMDVGANFLDHLPSSF 301


>gi|156375467|ref|XP_001630102.1| predicted protein [Nematostella vectensis]
 gi|156217116|gb|EDO38039.1| predicted protein [Nematostella vectensis]
          Length = 418

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 147/418 (35%), Positives = 208/418 (49%), Gaps = 21/418 (5%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L  N L  LP  +G + +LT L L  N LTSLPD  A L  L  L L  N L ELP  
Sbjct: 4   LKLDFNDLQRLPDDLGSLASLTELYLTGNLLTSLPDVFARLGNLTELHLNENSLEELPES 63

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQY-LSNLSMLSMRDNKIRELPPELGELKNLVTLDLA 247
           + KL+ L++L L  N+++ +  D    L++L+ L + +N + EL      +KNL  L+L 
Sbjct: 64  LGKLSKLRVLNLTGNKLEKLRDDFGAGLASLTELRIDENDLSELSVSFTLMKNLKVLELG 123

Query: 248 HNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKC 307
            NH+E LP++ GN   L  ++L  N +  +P+  G L  L    ++ N +E++PE     
Sbjct: 124 DNHIERLPEDFGNLRKLEVVNLSQNNIEKLPESFGFLCCLKSFDITGNHIENLPERFESA 183

Query: 308 VHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVY-----SIN 362
             L     +   ++ LPD     L +I N+ LS N+ +   S  P  F S+      S++
Sbjct: 184 CFLEHLYADNNNITWLPD-WFGDLPNIINLCLSDNELS--DSALPDHFGSISGKTLSSLD 240

Query: 363 FEHNQIDKIP--YGIFSRAKNL---SKVN-------MKDNLLTSLPLDLGTWVGLTELNL 410
              N+I K+P   G     K L   S +N          N L+ LP        LT+L+L
Sbjct: 241 LSGNRITKLPDSMGELKELKTLHLGSTINELERRAFQNGNWLSHLPDSFSQMANLTKLHL 300

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             NQ+  L +D  +LVNLE L +  N ++ LP S  NL KL  L L +N L  LP   G 
Sbjct: 301 DENQVVCLPDDFGDLVNLEWLDVGQNRIEMLPDSFCNLSKLWFLQLSKNHLTELPENFGN 360

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L  L  L L SNQL SLP +  +LTN+  L +  N L  IP  +  LENL  L L+ N
Sbjct: 361 LTSLVELRLDSNQLSSLPASFANLTNVKTLDLYRNKLSEIPRVLLKLENLMRLDLDGN 418



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 141/308 (45%), Gaps = 20/308 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L + ++ ++ L  S   + +L+ L L  N +  LP   G +  L  + L++N++  LP+S
Sbjct: 97  LRIDENDLSELSVSFTLMKNLKVLELGDNHIERLPEDFGNLRKLEVVNLSQNNIEKLPES 156

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
              L  L+  D+  N +  LP        L+ LY   N I  +      L N+  L + D
Sbjct: 157 FGFLCCLKSFDITGNHIENLPERFESACFLEHLYADNNNITWLPDWFGDLPNIINLCLSD 216

Query: 226 NKIRE--LPPELGEL--KNLVTLDLAHNHLEELPKEIGNCTMLVTLDL------------ 269
           N++ +  LP   G +  K L +LDL+ N + +LP  +G    L TL L            
Sbjct: 217 NELSDSALPDHFGSISGKTLSSLDLSGNRITKLPDSMGELKELKTLHLGSTINELERRAF 276

Query: 270 -QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
              N L ++PD    + NLT+L L  N++  +P+     V+L   +V    +  LPD   
Sbjct: 277 QNGNWLSHLPDSFSQMANLTKLHLDENQVVCLPDDFGDLVNLEWLDVGQNRIEMLPDS-F 335

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
            +L+ +  + LS+N  T  P       TS+  +  + NQ+  +P   F+   N+  +++ 
Sbjct: 336 CNLSKLWFLQLSKNHLTELPENF-GNLTSLVELRLDSNQLSSLPAS-FANLTNVKTLDLY 393

Query: 389 DNLLTSLP 396
            N L+ +P
Sbjct: 394 RNKLSEIP 401



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 141/307 (45%), Gaps = 20/307 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + I  LP     L  LE + L  N +  LP   G++  L    +  N + 
Sbjct: 115 KNLKVLELGDNHIERLPEDFGNLRKLEVVNLSQNNIEKLPESFGFLCCLKSFDITGNHIE 174

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRI-KTVHPD-IQYLSN- 217
           +LP+   +   L  L   +N +  LP     L ++  L L  N +  +  PD    +S  
Sbjct: 175 NLPERFESACFLEHLYADNNNITWLPDWFGDLPNIINLCLSDNELSDSALPDHFGSISGK 234

Query: 218 -LSMLSMRDNKIRELPPELGELKNLVTLDLAH-------------NHLEELPKEIGNCTM 263
            LS L +  N+I +LP  +GELK L TL L               N L  LP        
Sbjct: 235 TLSSLDLSGNRITKLPDSMGELKELKTLHLGSTINELERRAFQNGNWLSHLPDSFSQMAN 294

Query: 264 LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSL 323
           L  L L  N++V +PD  G+L+NL  L +  NR+E +P++      L    +    L+ L
Sbjct: 295 LTKLHLDENQVVCLPDDFGDLVNLEWLDVGQNRIEMLPDSFCNLSKLWFLQLSKNHLTEL 354

Query: 324 PDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
           P+    +LTS+  + L  N+ ++ P+      T+V +++   N++ +IP  +  + +NL 
Sbjct: 355 PEN-FGNLTSLVELRLDSNQLSSLPASF-ANLTNVKTLDLYRNKLSEIPR-VLLKLENLM 411

Query: 384 KVNMKDN 390
           ++++  N
Sbjct: 412 RLDLDGN 418



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 2/133 (1%)

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR 489
            L L  N L++LP  +G+L  L  L L  N L SLP+    L  L  L L  N L  LP 
Sbjct: 3   TLKLDFNDLQRLPDDLGSLASLTELYLTGNLLTSLPDVFARLGNLTELHLNENSLEELPE 62

Query: 490 AIGHLTNLSYLSVGENNLQSIPEEIGT-LENLHTLYLNDNTCLNNIPFELALCSNLQIMS 548
           ++G L+ L  L++  N L+ + ++ G  L +L  L +++N  L+ +     L  NL+++ 
Sbjct: 63  SLGKLSKLRVLNLTGNKLEKLRDDFGAGLASLTELRIDEND-LSELSVSFTLMKNLKVLE 121

Query: 549 LDNCPLSQIPSEI 561
           L +  + ++P + 
Sbjct: 122 LGDNHIERLPEDF 134


>gi|395825408|ref|XP_003785927.1| PREDICTED: protein LAP2 isoform 4 [Otolemur garnettii]
          Length = 1347

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 216/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ I  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMIEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L ++E L  S N ++ LPSS+G L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L  LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    +  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDAETQKMVLTNYMFPQQP 431



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 159/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L ++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLEILPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  I   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMIEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|383860520|ref|XP_003705737.1| PREDICTED: protein lap1-like [Megachile rotundata]
          Length = 1001

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 223/466 (47%), Gaps = 50/466 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE+I  L L+  ++  +PP V      LE+LYL  N++  LP  +     L  L L
Sbjct: 12  LRAQEEDICELQLNHCNLYDVPPDVFIYERTLEKLYLDANRIKDLPRPLFQCHELRVLSL 71

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           ++N +T+LP ++A+L  L  LDL  N + ELP  + +  +L+ + +  N  +     I +
Sbjct: 72  SDNEVTTLPPAIASLINLEYLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAITH 131

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           +  L  L + D  I  LP   G L  L TL+L  N++  LPK +     L  LD+ +N+ 
Sbjct: 132 IVGLRELYINDAYIEYLPANFGRLSALRTLELRENNMMTLPKSMSRLVNLQRLDIGNNDF 191

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+++G+LINLT L +  N +  +P  +++   LN F+   C +              
Sbjct: 192 TELPEVVGDLINLTELWIDGNDIRRIPVNINQLYRLNHFD---CTM-------------- 234

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                                          N I  IP  +    +++S +++  N +  
Sbjct: 235 -------------------------------NAIHVIPSEV-EGWRDISIMHLSSNEIYQ 262

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  L     +  L +  NQ++ L  DI  + +LE L+++ N L+ LPSSIG LRKL CL
Sbjct: 263 LPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSSLEELIVTKNFLEYLPSSIGLLRKLHCL 322

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           + + N L  LP EIG    L  L L+SN L  +P  +GHL++L  L++  N ++ +P  +
Sbjct: 323 NADNNYLRCLPPEIGSCTALSLLSLRSNNLTRVPPELGHLSSLRVLNLVNNCIKFLPVSM 382

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
             L NL  L+L+DN     +P +        +M L    L Q P +
Sbjct: 383 LNLSNLKALWLSDNQSQPLVPLQQEFNCEEDMMVLSCFMLPQKPRQ 428



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 174/333 (52%), Gaps = 5/333 (1%)

Query: 230 ELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           ++PP++    + L  L L  N +++LP+ +  C  L  L L  NE+  +P  + +LINL 
Sbjct: 31  DVPPDVFIYERTLEKLYLDANRIKDLPRPLFQCHELRVLSLSDNEVTTLPPAIASLINLE 90

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L LS N ++ +P+++ +C +L   ++        PD + + +  +  + ++ + +  Y 
Sbjct: 91  YLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAI-THIVGLRELYIN-DAYIEYL 148

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                + +++ ++    N +  +P  + SR  NL ++++ +N  T LP  +G  + LTEL
Sbjct: 149 PANFGRLSALRTLELRENNMMTLPKSM-SRLVNLQRLDIGNNDFTELPEVVGDLINLTEL 207

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
            +  N I ++  +I  L  L     + N +  +PS +   R +  + L  N++  LP+ +
Sbjct: 208 WIDGNDIRRIPVNINQLYRLNHFDCTMNAIHVIPSEVEGWRDISIMHLSSNEIYQLPDSL 267

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            +L+ +  L +  NQL +LP  IG +++L  L V +N L+ +P  IG L  LH L   DN
Sbjct: 268 CYLRTIVTLKVDDNQLNALPNDIGQMSSLEELIVTKNFLEYLPSSIGLLRKLHCLNA-DN 326

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             L  +P E+  C+ L ++SL +  L+++P E+
Sbjct: 327 NYLRCLPPEIGSCTALSLLSLRSNNLTRVPPEL 359



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 24/232 (10%)

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
            Q   +  +   H  +  +P  +F   + L K+ +  N +  LP  L     L  L+L  
Sbjct: 14  AQEEDICELQLNHCNLYDVPPDVFIYERTLEKLYLDANRIKDLPRPLFQCHELRVLSLSD 73

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI---- 468
           N+++ L   I +L+NLE L LS N +K+LP SI   + L+ +D+  N  E  P+ I    
Sbjct: 74  NEVTTLPPAIASLINLEYLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAITHIV 133

Query: 469 -------------------GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
                              G L  L+ L L+ N +++LP+++  L NL  L +G N+   
Sbjct: 134 GLRELYINDAYIEYLPANFGRLSALRTLELRENNMMTLPKSMSRLVNLQRLDIGNNDFTE 193

Query: 510 IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +PE +G L NL  L+++ N  +  IP  +     L         +  IPSE+
Sbjct: 194 LPEVVGDLINLTELWIDGND-IRRIPVNINQLYRLNHFDCTMNAIHVIPSEV 244


>gi|329664308|ref|NP_001192376.1| leucine-rich repeat and death domain-containing protein 1 [Bos
           taurus]
 gi|296488711|tpg|DAA30824.1| TPA: leucine-rich repeat and death domain-containing protein-like
           [Bos taurus]
          Length = 863

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 247/483 (51%), Gaps = 30/483 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++S + I+H+P  + +L +++EL+L  N +   PS +  + NL  L LA+N L  +PD+
Sbjct: 219 LNVSYNQISHIPKEISQLGNIKELFLNNNCIEDFPSGLESLKNLEILNLAKNKLRHIPDA 278

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV----------------H 209
           L++L+ LR L+L +N+L   P  +  L  L  L L  N I ++                H
Sbjct: 279 LSSLKNLRALNLEYNRLTIFPKALCFLPKLISLNLTGNLINSLPKEIKELKNLEKLLLDH 338

Query: 210 PDIQYLS-------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
             + +L+        +  L + DNK+  +  ++   K L  L L  N L+++P+ I +C 
Sbjct: 339 NKLTFLAVEIFLLLKMKELQLTDNKLEVISNKIENFKELRILILDKNLLKDMPENISHCA 398

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           +L  L L  N+L  +P  +  L NL +L ++ N L  +PE +S   ++      G  ++ 
Sbjct: 399 VLECLSLSDNKLTELPKNIHKLKNLRKLHINRNYLVKIPEYISHLNNMFSLEFSGNFITD 458

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
            P   + S  +I  + LS NK   +P  G     S++ ++   N I +IP  I S  K L
Sbjct: 459 FPIE-IKSCKNIAKVELSYNKIMYFPL-GLCALDSLHYLSLNGNYISEIPVDI-SFNKQL 515

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             +   +N L      L + + L  L+LG N+I K+   I N+V+L VL+L  N L+  P
Sbjct: 516 LHLEFNENKLLLFSEHLCSLINLEYLDLGKNKIRKIPPSISNMVSLHVLILCYNKLETFP 575

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
           + +  L  L+ LDL EN+++++P+EI  LK +Q+L + +NQ +  P  + HL +L  L++
Sbjct: 576 TEVCTLDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNNQFIYFPVELCHLQSLEELNI 635

Query: 503 GENN---LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPS 559
            + N   L  +PEE+  +  L  L +++N  +  +P  +    +L  ++ DN  +  +PS
Sbjct: 636 SQINGKKLTRLPEELSNMTKLKGLDISNN-AIREMPTNIGELRSLVSLNADNNQIRYLPS 694

Query: 560 EIV 562
             +
Sbjct: 695 SFL 697



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 204/421 (48%), Gaps = 29/421 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L+ + +  +   +E    L  L L  N L  +P  I +   L CL L++N LT LP +
Sbjct: 357 LQLTDNKLEVISNKIENFKELRILILDKNLLKDMPENISHCAVLECLSLSDNKLTELPKN 416

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ LR L +  N L ++P  +  L ++  L    N I     +I+   N++ + +  
Sbjct: 417 IHKLKNLRKLHINRNYLVKIPEYISHLNNMFSLEFSGNFITDFPIEIKSCKNIAKVELSY 476

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NKI   P  L  L +L  L L  N++ E+P +I     L+ L+   N+L+   + L +LI
Sbjct: 477 NKIMYFPLGLCALDSLHYLSLNGNYISEIPVDISFNKQLLHLEFNENKLLLFSEHLCSLI 536

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N++  +P ++S  V                        S++ + L  NK  
Sbjct: 537 NLEYLDLGKNKIRKIPPSISNMV------------------------SLHVLILCYNKLE 572

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P+   T   ++  ++   NQI  IP  I    K + K+N+ +N     P++L     L
Sbjct: 573 TFPTEVCT-LDNLRVLDLSENQIQTIPSEI-CNLKGIQKLNISNNQFIYFPVELCHLQSL 630

Query: 406 TELNLGT---NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
            ELN+      ++++L E++ N+  L+ L +SNN ++++P++IG LR L  L+ + N++ 
Sbjct: 631 EELNISQINGKKLTRLPEELSNMTKLKGLDISNNAIREMPTNIGELRSLVSLNADNNQIR 690

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP+    L  LQ+L L  N L  LP  I +L +L  ++  +N L   P EI   + L+T
Sbjct: 691 YLPSSFLSLNALQQLNLSGNNLSVLPSGIYNLFSLKEINFDDNPLLRPPMEICKGKQLYT 750

Query: 523 L 523
           +
Sbjct: 751 I 751



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 224/474 (47%), Gaps = 50/474 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+L+K+ + H+P ++  L +L  L L  N+L   P  + ++  L  L L  N + SLP  
Sbjct: 265 LNLAKNKLRHIPDALSSLKNLRALNLEYNRLTIFPKALCFLPKLISLNLTGNLINSLPKE 324

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKL-----------------------TSLKILYLRF 202
           +  L+ L  L L HNKL  L + ++ L                         L+IL L  
Sbjct: 325 IKELKNLEKLLLDHNKLTFLAVEIFLLLKMKELQLTDNKLEVISNKIENFKELRILILDK 384

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N +K +  +I + + L  LS+ DNK+ ELP  + +LKNL  L +  N+L ++P+ I +  
Sbjct: 385 NLLKDMPENISHCAVLECLSLSDNKLTELPKNIHKLKNLRKLHINRNYLVKIPEYISHLN 444

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            + +L+   N + + P  + +  N+ ++ LSYN++   P  L     L+  ++ G  +S 
Sbjct: 445 NMFSLEFSGNFITDFPIEIKSCKNIAKVELSYNKIMYFPLGLCALDSLHYLSLNGNYISE 504

Query: 323 LPDGL----------------------LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYS 360
           +P  +                      L SL ++  + L +NK    P    +   S++ 
Sbjct: 505 IPVDISFNKQLLHLEFNENKLLLFSEHLCSLINLEYLDLGKNKIRKIPPS-ISNMVSLHV 563

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
           +   +N+++  P  + +   NL  +++ +N + ++P ++    G+ +LN+  NQ      
Sbjct: 564 LILCYNKLETFPTEVCT-LDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNNQFIYFPV 622

Query: 421 DIQNLVNLEVLVLSN---NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           ++ +L +LE L +S      L +LP  + N+ KLK LD+  N +  +P  IG L+ L  L
Sbjct: 623 ELCHLQSLEELNISQINGKKLTRLPEELSNMTKLKGLDISNNAIREMPTNIGELRSLVSL 682

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
              +NQ+  LP +   L  L  L++  NNL  +P  I  L +L  +  +DN  L
Sbjct: 683 NADNNQIRYLPSSFLSLNALQQLNLSGNNLSVLPSGIYNLFSLKEINFDDNPLL 736


>gi|340721753|ref|XP_003399279.1| PREDICTED: protein lap1-like [Bombus terrestris]
          Length = 1040

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 224/466 (48%), Gaps = 50/466 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE+I  L L+  ++  +PP V      LE+LYL  N++  LP  +     L  L L
Sbjct: 12  LRTQEEDICELHLNNCNLYDVPPDVFIYERTLEKLYLDANRIKDLPRPLFQCHELRVLSL 71

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           ++N +T+LP ++A+L  L  LDL  N + ELP  + +  +L+ + +  N  +     I +
Sbjct: 72  SDNEVTTLPPAIASLINLEYLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAITH 131

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           +  L  L + D  I  LP   G L  L TL+L  N+L  LPK +     L  LD+ +N+ 
Sbjct: 132 IVGLRELYINDAYIEYLPANFGRLSALKTLELRENNLMTLPKSMSRLINLQRLDIGNNDF 191

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+++G+LINLT L +  N +  VP  +++   LN F+   C +              
Sbjct: 192 TELPEVVGDLINLTELWIDGNDIRRVPLNINQLYRLNHFD---CTM-------------- 234

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                                          N I  IP  +    +++S +++  N +  
Sbjct: 235 -------------------------------NAIHIIPSEV-EGWRDISIMHLSSNEIYQ 262

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  L     +  L +  NQ++ L  DI  + +LE L+++ N L+ LPSSIG LRKL CL
Sbjct: 263 LPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSSLEELIVTKNFLEYLPSSIGLLRKLHCL 322

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           +++ N L  LP EIG    L  L L+SN L  +P  +GHL++L  L++  N ++ +P  +
Sbjct: 323 NVDNNYLRCLPPEIGSCTALSLLSLRSNNLTRVPPELGHLSSLKVLNLVNNCIKFLPVSM 382

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
             L NL  L+L+DN     +P +        +M L    L Q P +
Sbjct: 383 LNLSNLKALWLSDNQSQPLVPLQQEFNCEEDMMVLSCFMLPQKPRQ 428



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 175/333 (52%), Gaps = 5/333 (1%)

Query: 230 ELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           ++PP++    + L  L L  N +++LP+ +  C  L  L L  NE+  +P  + +LINL 
Sbjct: 31  DVPPDVFIYERTLEKLYLDANRIKDLPRPLFQCHELRVLSLSDNEVTTLPPAIASLINLE 90

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L LS N ++ +P+++ +C +L   ++        PD + + +  +  + ++ + +  Y 
Sbjct: 91  YLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAI-THIVGLRELYIN-DAYIEYL 148

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                + +++ ++    N +  +P  + SR  NL ++++ +N  T LP  +G  + LTEL
Sbjct: 149 PANFGRLSALKTLELRENNLMTLPKSM-SRLINLQRLDIGNNDFTELPEVVGDLINLTEL 207

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
            +  N I ++  +I  L  L     + N +  +PS +   R +  + L  N++  LP+ +
Sbjct: 208 WIDGNDIRRVPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSL 267

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            +L+ +  L +  NQL +LP  IG +++L  L V +N L+ +P  IG L  LH L + DN
Sbjct: 268 CYLRTIVTLKVDDNQLNALPNDIGQMSSLEELIVTKNFLEYLPSSIGLLRKLHCLNV-DN 326

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             L  +P E+  C+ L ++SL +  L+++P E+
Sbjct: 327 NYLRCLPPEIGSCTALSLLSLRSNNLTRVPPEL 359


>gi|350426146|ref|XP_003494347.1| PREDICTED: protein lap1-like isoform 1 [Bombus impatiens]
 gi|350426149|ref|XP_003494348.1| PREDICTED: protein lap1-like isoform 2 [Bombus impatiens]
          Length = 1040

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 224/466 (48%), Gaps = 50/466 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE+I  L L+  ++  +PP V      LE+LYL  N++  LP  +     L  L L
Sbjct: 12  LRTQEEDICELHLNNCNLYDVPPDVFIYERTLEKLYLDANRIKDLPRPLFQCHELRVLSL 71

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           ++N +T+LP ++A+L  L  LDL  N + ELP  + +  +L+ + +  N  +     I +
Sbjct: 72  SDNEVTTLPPAIASLINLEYLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAITH 131

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           +  L  L + D  I  LP   G L  L TL+L  N+L  LPK +     L  LD+ +N+ 
Sbjct: 132 IVGLRELYINDAYIEYLPANFGRLSALKTLELRENNLMTLPKSMSRLINLQRLDIGNNDF 191

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+++G+LINLT L +  N +  VP  +++   LN F+   C +              
Sbjct: 192 TELPEVVGDLINLTELWIDGNDIRRVPLNINQLYRLNHFD---CTM-------------- 234

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                                          N I  IP  +    +++S +++  N +  
Sbjct: 235 -------------------------------NAIHIIPSEV-EGWRDISIMHLSSNEIYQ 262

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  L     +  L +  NQ++ L  DI  + +LE L+++ N L+ LPSSIG LRKL CL
Sbjct: 263 LPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSSLEELIVTKNFLEYLPSSIGLLRKLHCL 322

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           +++ N L  LP EIG    L  L L+SN L  +P  +GHL++L  L++  N ++ +P  +
Sbjct: 323 NVDNNYLRCLPPEIGSCTALSLLSLRSNNLTRVPPELGHLSSLKVLNLVNNCIKFLPVSM 382

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
             L NL  L+L+DN     +P +        +M L    L Q P +
Sbjct: 383 LNLSNLKALWLSDNQSQPLVPLQQEFNCEEDMMVLSCFMLPQKPRQ 428



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 175/333 (52%), Gaps = 5/333 (1%)

Query: 230 ELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           ++PP++    + L  L L  N +++LP+ +  C  L  L L  NE+  +P  + +LINL 
Sbjct: 31  DVPPDVFIYERTLEKLYLDANRIKDLPRPLFQCHELRVLSLSDNEVTTLPPAIASLINLE 90

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L LS N ++ +P+++ +C +L   ++        PD + + +  +  + ++ + +  Y 
Sbjct: 91  YLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAI-THIVGLRELYIN-DAYIEYL 148

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                + +++ ++    N +  +P  + SR  NL ++++ +N  T LP  +G  + LTEL
Sbjct: 149 PANFGRLSALKTLELRENNLMTLPKSM-SRLINLQRLDIGNNDFTELPEVVGDLINLTEL 207

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
            +  N I ++  +I  L  L     + N +  +PS +   R +  + L  N++  LP+ +
Sbjct: 208 WIDGNDIRRVPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSL 267

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            +L+ +  L +  NQL +LP  IG +++L  L V +N L+ +P  IG L  LH L + DN
Sbjct: 268 CYLRTIVTLKVDDNQLNALPNDIGQMSSLEELIVTKNFLEYLPSSIGLLRKLHCLNV-DN 326

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             L  +P E+  C+ L ++SL +  L+++P E+
Sbjct: 327 NYLRCLPPEIGSCTALSLLSLRSNNLTRVPPEL 359


>gi|255081536|ref|XP_002507990.1| predicted protein [Micromonas sp. RCC299]
 gi|226523266|gb|ACO69248.1| predicted protein [Micromonas sp. RCC299]
          Length = 323

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/350 (36%), Positives = 186/350 (53%), Gaps = 38/350 (10%)

Query: 223 MRDNKIREL-----------PPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
           M D ++ EL           P E+G L  L  L L  N L  +P EIG  T LVTLDL  
Sbjct: 1   MVDGRVNELELDGLGLTGAVPAEVGRLSALRVLYLNDNQLRNVPAEIGQLTSLVTLDLHA 60

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           N+L ++P  +G L +L RL L  N+L SVP  + +                        L
Sbjct: 61  NQLTSVPAEIGQLTSLVRLDLQVNQLTSVPAEIGQ------------------------L 96

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
           TS+  + LSRN+  + P+    Q TS+  +    NQ+  +P  I  +  +L+ + + +N 
Sbjct: 97  TSLAGLFLSRNQLLSVPAE-IGQLTSLAHLYLSRNQLTSVPAEI-GQLTSLAHLYISNNQ 154

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           LTS+P ++G    LTEL L  N+++ +  +I  L +LE L L+ N L  LP+ IG L  L
Sbjct: 155 LTSVPAEIGQLTSLTELYLNGNKLTSVPAEIGQLTSLEKLDLAGNQLTSLPAEIGQLMSL 214

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
             L+L  N+L S+P EIG L  L  L L +NQL S+P  IG LT+L  L +G N L+++ 
Sbjct: 215 TELNLHANQLTSVPAEIGQLTSLTELYLNANQLTSVPAEIGQLTSLESLFLGNNQLRNVL 274

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            EIG L +L  LYL DN  L ++P E+   ++L ++ L+   L+ +P+EI
Sbjct: 275 AEIGQLTSLKWLYLEDNK-LTSLPAEIGQLTSLMMLHLNGNQLTSLPAEI 323



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 106/307 (34%), Positives = 180/307 (58%), Gaps = 3/307 (0%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           +P  V +L+ L  LYL  N+L ++P++IG +T+L  L L  N LTS+P  +  L  L  L
Sbjct: 20  VPAEVGRLSALRVLYLNDNQLRNVPAEIGQLTSLVTLDLHANQLTSVPAEIGQLTSLVRL 79

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           DL+ N+L  +P  + +LTSL  L+L  N++ +V  +I  L++L+ L +  N++  +P E+
Sbjct: 80  DLQVNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPAEIGQLTSLAHLYLSRNQLTSVPAEI 139

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
           G+L +L  L +++N L  +P EIG  T L  L L  N+L ++P  +G L +L +L L+ N
Sbjct: 140 GQLTSLAHLYISNNQLTSVPAEIGQLTSLTELYLNGNKLTSVPAEIGQLTSLEKLDLAGN 199

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
           +L S+P  + + + L E N+    L+S+P   +  LTS+  + L+ N+ T+ P+    Q 
Sbjct: 200 QLTSLPAEIGQLMSLTELNLHANQLTSVPAE-IGQLTSLTELYLNANQLTSVPA-EIGQL 257

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
           TS+ S+   +NQ+  +   I  +  +L  + ++DN LTSLP ++G    L  L+L  NQ+
Sbjct: 258 TSLESLFLGNNQLRNVLAEI-GQLTSLKWLYLEDNKLTSLPAEIGQLTSLMMLHLNGNQL 316

Query: 416 SKLSEDI 422
           + L  +I
Sbjct: 317 TSLPAEI 323



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 153/274 (55%), Gaps = 2/274 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           +++ LDL  + +T +P  + +LT L  L L  N+L S+P++IG +T+L  L L+ N L S
Sbjct: 52  SLVTLDLHANQLTSVPAEIGQLTSLVRLDLQVNQLTSVPAEIGQLTSLAGLFLSRNQLLS 111

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  +  L  L  L L  N+L  +P  + +LTSL  LY+  N++ +V  +I  L++L+ L
Sbjct: 112 VPAEIGQLTSLAHLYLSRNQLTSVPAEIGQLTSLAHLYISNNQLTSVPAEIGQLTSLTEL 171

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  NK+  +P E+G+L +L  LDLA N L  LP EIG    L  L+L  N+L ++P  +
Sbjct: 172 YLNGNKLTSVPAEIGQLTSLEKLDLAGNQLTSLPAEIGQLMSLTELNLHANQLTSVPAEI 231

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L +LT L L+ N+L SVP  + +   L    +    L ++    +  LTS+  + L  
Sbjct: 232 GQLTSLTELYLNANQLTSVPAEIGQLTSLESLFLGNNQLRNVLAE-IGQLTSLKWLYLED 290

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
           NK T+ P+    Q TS+  ++   NQ+  +P  I
Sbjct: 291 NKLTSLPA-EIGQLTSLMMLHLNGNQLTSLPAEI 323


>gi|307205957|gb|EFN84083.1| Protein LAP2 [Harpegnathos saltator]
          Length = 1018

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 225/466 (48%), Gaps = 50/466 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE+I  L L+  ++  +PP V      LE+LYL  N++  LP  +     L  L L
Sbjct: 12  LRAQEEDICELQLNHCNLYDVPPDVFIYERTLEKLYLDANRIKDLPRPLFQCHELRVLSL 71

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           ++N +++LP ++A+L  L  LDL  N + ELP  + +  SL+ + +  N  +     I +
Sbjct: 72  SDNEVSTLPPAIASLINLEYLDLSKNSIKELPDSIKECKSLRSIDISVNPFERFPDAITH 131

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           +  L  L + D  I  LP   G L  L TL+L  N++  LPK +     L  LD+ +N+ 
Sbjct: 132 IVGLRELYINDAYIEYLPANFGRLSALKTLELRENNMMTLPKSMSRLVNLQRLDIGNNDF 191

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+++G+LINLT L +  N +  +P  + +   LN F+    A+ +LP   +     I
Sbjct: 192 TELPEVVGDLINLTELWIDGNDIRRIPGNIEQLYRLNHFDCTMNAIHTLP-MEIRGWRDI 250

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
           + + LS N+    P                    D + Y      + +  + + DN L +
Sbjct: 251 SIMNLSSNEMYELP--------------------DTLCY-----LRTVVTLKIDDNQLNA 285

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP D+G             Q+S L E          L+++ N L+ LPSSIG LRKL CL
Sbjct: 286 LPNDIG-------------QMSSLEE----------LIVTKNFLEYLPSSIGLLRKLHCL 322

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           + + N L +LP EIG    L  L L+SN L  +P  +GHL++L  L++  N ++ +P  +
Sbjct: 323 NADNNYLRALPAEIGSCTALSLLSLRSNNLTRVPPELGHLSSLRVLNLVNNCIKFLPVSM 382

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
             L NL  L+L+DN     +P +        +M L    L Q P +
Sbjct: 383 LNLSNLKALWLSDNQSQPLVPLQQEFNCEEDMMVLSCFMLPQKPRQ 428



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 174/333 (52%), Gaps = 5/333 (1%)

Query: 230 ELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           ++PP++    + L  L L  N +++LP+ +  C  L  L L  NE+  +P  + +LINL 
Sbjct: 31  DVPPDVFIYERTLEKLYLDANRIKDLPRPLFQCHELRVLSLSDNEVSTLPPAIASLINLE 90

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L LS N ++ +P+++ +C  L   ++        PD + + +  +  + ++ + +  Y 
Sbjct: 91  YLDLSKNSIKELPDSIKECKSLRSIDISVNPFERFPDAI-THIVGLRELYIN-DAYIEYL 148

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                + +++ ++    N +  +P  + SR  NL ++++ +N  T LP  +G  + LTEL
Sbjct: 149 PANFGRLSALKTLELRENNMMTLPKSM-SRLVNLQRLDIGNNDFTELPEVVGDLINLTEL 207

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
            +  N I ++  +I+ L  L     + N +  LP  I   R +  ++L  N++  LP+ +
Sbjct: 208 WIDGNDIRRIPGNIEQLYRLNHFDCTMNAIHTLPMEIRGWRDISIMNLSSNEMYELPDTL 267

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            +L+ +  L +  NQL +LP  IG +++L  L V +N L+ +P  IG L  LH L   DN
Sbjct: 268 CYLRTVVTLKIDDNQLNALPNDIGQMSSLEELIVTKNFLEYLPSSIGLLRKLHCLNA-DN 326

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             L  +P E+  C+ L ++SL +  L+++P E+
Sbjct: 327 NYLRALPAEIGSCTALSLLSLRSNNLTRVPPEL 359


>gi|418744885|ref|ZP_13301230.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794216|gb|EKR92126.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 367

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/339 (35%), Positives = 187/339 (55%), Gaps = 26/339 (7%)

Query: 193 TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLE 252
           T +++L+L   ++  +  +I  L NL  L++ +NK+  LP E+G L++L  LDL  N + 
Sbjct: 37  TQVRVLHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQEIGNLQHLQKLDLGFNKIT 96

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
            LPKEIG    L  L+L  N+L  +P  +GNL +L RL L  N+  ++PE + K  +L E
Sbjct: 97  VLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQE 156

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
             +    L++LP  +  +L ++  + L+ N+ TA P                        
Sbjct: 157 LYLNENQLTTLPKEI-GNLQNLQELYLNENQLTALPKE---------------------- 193

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
                + +NL K+ +  N LT+LP+++G    L  LNL  NQ++ L ++I  L NL+ L 
Sbjct: 194 ---IGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLDKNQLTTLPKEIGKLQNLQGLH 250

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L NN L  LP  I NL+KLK L L +N+L ++P EIG L+ L+ L L SNQL ++P+ I 
Sbjct: 251 LGNNKLTALPIEIENLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIE 310

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
           +L  L  L +  N L ++P+EIG L+NL  LYL  N  L
Sbjct: 311 NLQKLETLDLYNNQLTTLPKEIGKLQNLQDLYLGGNPSL 349



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/336 (36%), Positives = 180/336 (53%), Gaps = 26/336 (7%)

Query: 124 THLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLN 183
           T +  L+L G KL +LP +IG + NL  L L EN LT+LP  + NLQ L+ LDL  NK+ 
Sbjct: 37  TQVRVLHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQEIGNLQHLQKLDLGFNKIT 96

Query: 184 ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVT 243
            LP  + +L SL+ L L FN++ T+  +I  L +L  L +  N+   LP E+G+L+NL  
Sbjct: 97  VLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQE 156

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L L  N L  LPKEIGN   L  L L  N+L  +P  +G L NL +L L+ N+L ++P  
Sbjct: 157 LYLNENQLTTLPKEIGNLQNLQELYLNENQLTALPKEIGKLQNLQKLVLNRNQLTTLPIE 216

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           +    +L   N++   L++LP   +  L ++  + L  NK TA P               
Sbjct: 217 IGNLQNLQGLNLDKNQLTTLPKE-IGKLQNLQGLHLGNNKLTALP--------------I 261

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
           E   + K+ +           + +  N LT++P ++G    L ELNL +NQ++ + ++I+
Sbjct: 262 EIENLQKLKW-----------LGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIE 310

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           NL  LE L L NN L  LP  IG L+ L+ L L  N
Sbjct: 311 NLQKLETLDLYNNQLTTLPKEIGKLQNLQDLYLGGN 346



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/380 (33%), Positives = 196/380 (51%), Gaps = 60/380 (15%)

Query: 207 TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
           T++  +Q  + + +L +   K+  LP E+G+L+NL  L+L  N L  LP+EIGN   L  
Sbjct: 28  TLNEALQNPTQVRVLHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQEIGNLQHLQK 87

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           LDL  N++  +P  +G L +L  L LS+N+L ++P+ +    HL                
Sbjct: 88  LDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKR-------------- 133

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
                     + L  N+FTA P                             + +NL ++ 
Sbjct: 134 ----------LFLGLNQFTALPEE-------------------------IGKLQNLQELY 158

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           + +N LT+LP ++G    L EL L  NQ++ L ++I  L NL+ LVL+ N L  LP  IG
Sbjct: 159 LNENQLTTLPKEIGNLQNLQELYLNENQLTALPKEIGKLQNLQKLVLNRNQLTTLPIEIG 218

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
           NL+ L+ L+L++N+L +LP EIG L+ LQ L L +N+L +LP  I +L  L +L + +N 
Sbjct: 219 NLQNLQGLNLDKNQLTTLPKEIGKLQNLQGLHLGNNKLTALPIEIENLQKLKWLGLNKNQ 278

Query: 507 LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI----- 561
           L +IP+EIG L+NL  L L+ N  L  IP E+     L+ + L N  L+ +P EI     
Sbjct: 279 LTTIPKEIGNLQNLKELNLSSNQ-LTTIPKEIENLQKLETLDLYNNQLTTLPKEIGKLQN 337

Query: 562 -----VVGGPSLIIRYLKMQ 576
                + G PSLI +  K+Q
Sbjct: 338 LQDLYLGGNPSLIDQKEKIQ 357



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 124/345 (35%), Positives = 190/345 (55%), Gaps = 26/345 (7%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +L ++L N  Q+RVL L   KL  LP  + +L +LK L L  N++ T+  +I  L +L  
Sbjct: 28  TLNEALQNPTQVRVLHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQEIGNLQHLQK 87

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  NKI  LP E+G+L++L  L+L+ N L  LPKEIGN   L  L L  N+   +P+ 
Sbjct: 88  LDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEE 147

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L+ N+L ++P+ +    +L E  +    L++LP   +  L ++  + L+
Sbjct: 148 IGKLQNLQELYLNENQLTTLPKEIGNLQNLQELYLNENQLTALPKE-IGKLQNLQKLVLN 206

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN+ T  P                      I  G     +NL  +N+  N LT+LP ++G
Sbjct: 207 RNQLTTLP----------------------IEIG---NLQNLQGLNLDKNQLTTLPKEIG 241

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+LG N+++ L  +I+NL  L+ L L+ N L  +P  IGNL+ LK L+L  N+
Sbjct: 242 KLQNLQGLHLGNNKLTALPIEIENLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQ 301

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
           L ++P EI  L++L+ L L +NQL +LP+ IG L NL  L +G N
Sbjct: 302 LTTIPKEIENLQKLETLDLYNNQLTTLPKEIGKLQNLQDLYLGGN 346



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/309 (34%), Positives = 168/309 (54%), Gaps = 5/309 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L+   +  LP  + +L +L+EL L+ NKL +LP +IG + +L  L L  N +T LP  
Sbjct: 42  LHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQEIGNLQHLQKLDLGFNKITVLPKE 101

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ L+L  N+L  LP  +  L  LK L+L  N+   +  +I  L NL  L + +
Sbjct: 102 IGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQELYLNE 161

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G L+NL  L L  N L  LPKEIG    L  L L  N+L  +P  +GNL 
Sbjct: 162 NQLTTLPKEIGNLQNLQELYLNENQLTALPKEIGKLQNLQKLVLNRNQLTTLPIEIGNLQ 221

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L ++P+ + K  +L   ++    L++LP   + +L  +  + L++N+ T
Sbjct: 222 NLQGLNLDKNQLTTLPKEIGKLQNLQGLHLGNNKLTALPIE-IENLQKLKWLGLNKNQLT 280

Query: 346 AYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
             P   G  Q  ++  +N   NQ+  IP  I +  K L  +++ +N LT+LP ++G    
Sbjct: 281 TIPKEIGNLQ--NLKELNLSSNQLTTIPKEIENLQK-LETLDLYNNQLTTLPKEIGKLQN 337

Query: 405 LTELNLGTN 413
           L +L LG N
Sbjct: 338 LQDLYLGGN 346



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/272 (36%), Positives = 150/272 (55%), Gaps = 6/272 (2%)

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
           +L      ++ E L     +   ++ G  L +LP+ +   L ++  + L  NK T  P  
Sbjct: 20  KLDAEDFHTLNEALQNPTQVRVLHLNGKKLIALPEEI-GQLQNLKELNLWENKLTTLPQE 78

Query: 351 -GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
            G  Q      + F  N+I  +P  I  + ++L ++N+  N L +LP ++G    L  L 
Sbjct: 79  IGNLQHLQKLDLGF--NKITVLPKEI-GQLQSLQELNLSFNQLATLPKEIGNLQHLKRLF 135

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           LG NQ + L E+I  L NL+ L L+ N L  LP  IGNL+ L+ L L EN+L +LP EIG
Sbjct: 136 LGLNQFTALPEEIGKLQNLQELYLNENQLTTLPKEIGNLQNLQELYLNENQLTALPKEIG 195

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            L+ LQ+L+L  NQL +LP  IG+L NL  L++ +N L ++P+EIG L+NL  L+L +N 
Sbjct: 196 KLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLDKNQLTTLPKEIGKLQNLQGLHLGNNK 255

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L  +P E+     L+ + L+   L+ IP EI
Sbjct: 256 -LTALPIEIENLQKLKWLGLNKNQLTTIPKEI 286


>gi|187954433|gb|AAI41179.1| Erbb2ip protein [Mus musculus]
          Length = 1294

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 215/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIP-GFIGSLRQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL    +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDFLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L ++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L  N+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    +  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDTETQKMVLTNYMFPQQP 431



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 158/310 (50%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ L+  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL    L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L ++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGNWKNITVLFLHCNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 115/222 (51%), Gaps = 25/222 (11%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            + NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I
Sbjct: 53  LDANQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENI 111

Query: 423 QN-----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           +N                       L+NL  L L++  L+ LP++ G L KL+ L+L EN
Sbjct: 112 KNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELREN 171

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L+ LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L  
Sbjct: 172 QLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQ 231

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L ++ N  +  +   ++ C NLQ   L +  L Q+P  I
Sbjct: 232 LTYLDVSKNN-IEMVEEGISTCENLQDFLLSSNSLQQLPETI 272


>gi|238908508|ref|NP_001155000.1| leucine-rich repeat and death domain-containing protein 1 [Homo
           sapiens]
 gi|171855256|sp|A4D1F6.2|LRRD1_HUMAN RecName: Full=Leucine-rich repeat and death domain-containing
           protein 1
          Length = 860

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 244/505 (48%), Gaps = 53/505 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++S + I+H+P  + +L ++ +L+ Y N + + PS +  + NL  L L +N L  +PD+
Sbjct: 216 LNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDT 275

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L +L+ LRVL+L +N+L   P  +  L  L  L L  N I ++  +I+ L NL  L M  
Sbjct: 276 LPSLKTLRVLNLEYNQLTTFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLMDH 335

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLE-----------------------ELPKEIGNCT 262
           NK+  L  E+ +L  +  L LA N LE                        +P++I  C 
Sbjct: 336 NKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKISCCA 395

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           ML  L L  N+L  +P  +  L NL +L ++ N +  + + +S   ++      G  ++ 
Sbjct: 396 MLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKITDCISHLNNICSLEFSGNIITD 455

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P   + +   I  I LS NK   +P  G     S+Y ++   N I +IP  I S +K L
Sbjct: 456 VPIE-IKNCQKIIKIELSYNKIMYFPL-GLCALDSLYYLSVNGNYISEIPVDI-SFSKQL 512

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + + +N L        + + L  L+LG NQI K+   I N+++L VL+L  N  +  P
Sbjct: 513 LHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFP 572

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV----------------- 485
             +  L  L+ LDL EN+L+ + ++I  LK +Q+L   SNQ +                 
Sbjct: 573 RELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNI 632

Query: 486 ---------SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
                     LP  + ++T L  L +  N ++ IP  IG L NL +L+  +N  ++ +P 
Sbjct: 633 SQIKGRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQ-ISYLPP 691

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEI 561
            L   ++LQ ++L    L+ +PS I
Sbjct: 692 SLLSLNDLQQLNLSGNNLTALPSAI 716



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 187/391 (47%), Gaps = 32/391 (8%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH-PDIQYLSNLSMLSMRDNKIRELP 232
            ++L    L E P  + K+  +K LYL  N+IKT    D   L  L +LS+++N +  LP
Sbjct: 145 TVNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSLP 204

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            E+  L NL  L+++HNH+  +PKEI     +  L   +N + N P  L  L NL  L L
Sbjct: 205 SEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSL 264

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
             N+L  +P+T                        L SL ++  + L  N+ T +P    
Sbjct: 265 GKNKLRHIPDT------------------------LPSLKTLRVLNLEYNQLTTFPK-AL 299

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                + S++   N I  +P  I    KNL  + M  N LT L +++   + + EL L  
Sbjct: 300 CFLPKLISLDLTGNLISSLPKEI-RELKNLETLLMDHNKLTFLAVEIFQLLKIKELQLAD 358

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N++  +S  I+N   L +L+L  NLLK +P  I     L+CL L +NKL  LP  I  L 
Sbjct: 359 NKLEVISHKIENFRELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLN 418

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            L++L +  N +V +   I HL N+  L    N +  +P EI   + +  + L+ N  + 
Sbjct: 419 NLRKLHVNRNNMVKITDCISHLNNICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIM- 477

Query: 533 NIPFELALCS--NLQIMSLDNCPLSQIPSEI 561
              F L LC+  +L  +S++   +S+IP +I
Sbjct: 478 --YFPLGLCALDSLYYLSVNGNYISEIPVDI 506



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 224/452 (49%), Gaps = 29/452 (6%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C    +++LDL+ + I+ LP  + +L +LE L +  NKL  L  +I  +  +  L LA+N
Sbjct: 300 CFLPKLISLDLTGNLISSLPKEIRELKNLETLLMDHNKLTFLAVEIFQLLKIKELQLADN 359

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L  +   + N ++LR+L L  N L  +P  +     L+ L L  N++  +   I  L+N
Sbjct: 360 KLEVISHKIENFRELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNN 419

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N + ++   +  L N+ +L+ + N + ++P EI NC  ++ ++L +N+++  
Sbjct: 420 LRKLHVNRNNMVKITDCISHLNNICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYF 479

Query: 278 P------DML------GNLIN-----------LTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P      D L      GN I+           L  L LS N+L    E     ++L   +
Sbjct: 480 PLGLCALDSLYYLSVNGNYISEIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLD 539

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +    +  +P  + S++ S++ + L  NKF  +P    T   ++  ++   NQ+ KI   
Sbjct: 540 LGKNQIKKIPASI-SNMISLHVLILCCNKFETFPRELCT-LENLQVLDLSENQLQKISSD 597

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT---NQISKLSEDIQNLVNLEVL 431
           I    K + K+N   N     P++L     L +LN+      ++++L  ++ N+  L+ L
Sbjct: 598 I-CNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKEL 656

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            +SNN ++++P +IG LR L  L    N++  LP  +  L +LQ+L L  N L +LP AI
Sbjct: 657 DISNNAIREIPRNIGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSAI 716

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
            ++ +L  ++  +N L   P EI   + L+T+
Sbjct: 717 YNIFSLKEINFDDNPLLRPPVEICKGKQLYTI 748


>gi|54607112|ref|NP_067538.2| protein LAP2 isoform 2 [Mus musculus]
          Length = 1376

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 215/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIP-GFIGSLRQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL    +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDFLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L ++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L  N+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    +  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDTETQKMVLTNYMFPQQP 431



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 158/310 (50%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ L+  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL    L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L ++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGNWKNITVLFLHCNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 115/222 (51%), Gaps = 25/222 (11%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            + NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I
Sbjct: 53  LDANQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENI 111

Query: 423 QN-----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           +N                       L+NL  L L++  L+ LP++ G L KL+ L+L EN
Sbjct: 112 KNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELREN 171

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L+ LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L  
Sbjct: 172 QLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQ 231

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L ++ N  +  +   ++ C NLQ   L +  L Q+P  I
Sbjct: 232 LTYLDVSKNN-IEMVEEGISTCENLQDFLLSSNSLQQLPETI 272


>gi|301103829|ref|XP_002901000.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262101338|gb|EEY59390.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1178

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/442 (30%), Positives = 222/442 (50%), Gaps = 40/442 (9%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +L LS++ +T +P  ++ L HLEEL +  N+L  LPS +   T+LT +  + N + +   
Sbjct: 245 SLVLSRNCLTRIPSGIQDLIHLEELDVSFNQLTRLPSCLQTTTSLTSICASHNLIQTFSP 304

Query: 165 SLANLQQLRVLDLRHNKLNELPMV----------------VYKLTSLKILYLRFNRIKTV 208
            L  L+++R LDL +N+L ELP V                V  L  L++L L  N++  V
Sbjct: 305 KLWKLREIRYLDLSYNRLKELPFVEGDLKLLRETGEWQVGVGLLEHLQVLRLSNNQLVEV 364

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
              I+  S+L++L + +N++  L  E+  L +L  + L HN L ELP+ IGN  ML  LD
Sbjct: 365 PKSIEKCSHLTLLDISNNQLSSLSDEISALTSLHRMILHHNALHELPEAIGNLEMLQELD 424

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
           L HN LV +P+ +G L NL  L L  N+L  +P        L   +++        +   
Sbjct: 425 LAHNSLVTLPESIGMLRNLKTLTLVSNQLRLLPNEFGSLSQLRHLDLDNNPKLITLEAFF 484

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP--YGIFSRAKNLSKVN 386
             L S+  ++ S      + S    + + V  +   HN + + P   G  +    L +++
Sbjct: 485 RHLPSVEFLSASSCGIVTFASLDFLKDSPVEKLRLNHNALQEFPLLIGHAAMQDTLQELD 544

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           + D+ LT +PL +  +                        +L+   LS+N L+ LP+ IG
Sbjct: 545 LSDSHLTQVPLAVLLYCS----------------------HLQYFDLSSNSLRVLPTEIG 582

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
           +LR+L+ L+L  N L++LP+E+  L  L++L    NQL  LP  +G+L  L+ L+V  N 
Sbjct: 583 HLRRLEVLNLSSNTLQALPDELTQLPRLRQLKCDHNQLGQLPLRLGNLVQLTKLNVSFNR 642

Query: 507 LQSIPEEIGTLENLHTLYLNDN 528
           L+S+P  +  +  L +LY +DN
Sbjct: 643 LRSMPTSLMEMTQLQSLYASDN 664



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 195/411 (47%), Gaps = 33/411 (8%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L   + NLQ L+ L L  N L  +P  +  L  L+ L + FN++  +   +Q  ++L+ +
Sbjct: 233 LSSRIWNLQYLKSLVLSRNCLTRIPSGIQDLIHLEELDVSFNQLTRLPSCLQTTTSLTSI 292

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
               N I+   P+L +L+ +  LDL++N L+ELP   G+  +L        E       +
Sbjct: 293 CASHNLIQTFSPKLWKLREIRYLDLSYNRLKELPFVEGDLKLL-------RETGEWQVGV 345

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L +L  LRLS N+L  VP+++ KC HL   ++    LSSL D + S+LTS++ + L  
Sbjct: 346 GLLEHLQVLRLSNNQLVEVPKSIEKCSHLTLLDISNNQLSSLSDEI-SALTSLHRMILHH 404

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N     P         +  ++  HN +  +P  I    +NL  + +  N L  LP + G+
Sbjct: 405 NALHELPEA-IGNLEMLQELDLAHNSLVTLPESI-GMLRNLKTLTLVSNQLRLLPNEFGS 462

Query: 402 WVGLTELNLGTN-QISKLSEDIQNLVNLEVLVLSN---------NLLKKLPSSIGNLRKL 451
              L  L+L  N ++  L    ++L ++E L  S+         + LK  P        +
Sbjct: 463 LSQLRHLDLDNNPKLITLEAFFRHLPSVEFLSASSCGIVTFASLDFLKDSP--------V 514

Query: 452 KCLDLEENKLESLPNEIGFLK---ELQRLILQSNQLVSLPRAIG-HLTNLSYLSVGENNL 507
           + L L  N L+  P  IG       LQ L L  + L  +P A+  + ++L Y  +  N+L
Sbjct: 515 EKLRLNHNALQEFPLLIGHAAMQDTLQELDLSDSHLTQVPLAVLLYCSHLQYFDLSSNSL 574

Query: 508 QSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           + +P EIG L  L  L L+ NT L  +P EL     L+ +  D+  L Q+P
Sbjct: 575 RVLPTEIGHLRRLEVLNLSSNT-LQALPDELTQLPRLRQLKCDHNQLGQLP 624



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 161/363 (44%), Gaps = 56/363 (15%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E++  L LS + +  +P S+EK +HL  L +  N+L+SL  +I  +T+L  + L  N+L 
Sbjct: 349 EHLQVLRLSNNQLVEVPKSIEKCSHLTLLDISNNQLSSLSDEISALTSLHRMILHHNALH 408

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP+++ NL+ L+ LDL HN L  LP  +  L +LK L L  N+++ +  +   LS L  
Sbjct: 409 ELPEAIGNLEMLQELDLAHNSLVTLPESIGMLRNLKTLTLVSNQLRLLPNEFGSLSQLRH 468

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHL---EELPKEIGNCTMLVTLD--------- 268
           L + +N              L+TL+    HL   E L           +LD         
Sbjct: 469 LDLDNN------------PKLITLEAFFRHLPSVEFLSASSCGIVTFASLDFLKDSPVEK 516

Query: 269 --LQHNELVNIPDMLGNLI---NLTRLRLSYNRLESVP-ETLSKCVHLNEFNVEGCALSS 322
             L HN L   P ++G+      L  L LS + L  VP   L  C HL  F++   +L  
Sbjct: 517 LRLNHNALQEFPLLIGHAAMQDTLQELDLSDSHLTQVPLAVLLYCSHLQYFDLSSNSLRV 576

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LP   +  L  +  + LS N   A P    TQ   +  +  +HNQ               
Sbjct: 577 LPTE-IGHLRRLEVLNLSSNTLQALPD-ELTQLPRLRQLKCDHNQ--------------- 619

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
                    L  LPL LG  V LT+LN+  N++  +   +  +  L+ L  S+NL+   P
Sbjct: 620 ---------LGQLPLRLGNLVQLTKLNVSFNRLRSMPTSLMEMTQLQSLYASDNLMATPP 670

Query: 443 SSI 445
            ++
Sbjct: 671 PAL 673



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 152/348 (43%), Gaps = 70/348 (20%)

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           + NL  L  L LS N L  +P  +   +HL E +V    L+ LP   L + TS+ +I  S
Sbjct: 237 IWNLQYLKSLVLSRNCLTRIPSGIQDLIHLEELDVSFNQLTRLP-SCLQTTTSLTSICAS 295

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY-----------GIFSRA----KNLSKV 385
            N    + S    +   +  ++  +N++ ++P+           G +       ++L  +
Sbjct: 296 HNLIQTF-SPKLWKLREIRYLDLSYNRLKELPFVEGDLKLLRETGEWQVGVGLLEHLQVL 354

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
            + +N L  +P  +     LT L++  NQ+S LS++I  L +L  ++L +N L +LP +I
Sbjct: 355 RLSNNQLVEVPKSIEKCSHLTLLDISNNQLSSLSDEISALTSLHRMILHHNALHELPEAI 414

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG------------- 492
           GNL  L+ LDL  N L +LP  IG L+ L+ L L SNQL  LP   G             
Sbjct: 415 GNLEMLQELDLAHNSLVTLPESIGMLRNLKTLTLVSNQLRLLPNEFGSLSQLRHLDLDNN 474

Query: 493 -----------HLTNLSYLSVG------------------------ENNLQSIPEEIGTL 517
                      HL ++ +LS                           N LQ  P  IG  
Sbjct: 475 PKLITLEAFFRHLPSVEFLSASSCGIVTFASLDFLKDSPVEKLRLNHNALQEFPLLIGHA 534

Query: 518 ---ENLHTLYLNDNTCLNNIPFELAL-CSNLQIMSLDNCPLSQIPSEI 561
              + L  L L+D + L  +P  + L CS+LQ   L +  L  +P+EI
Sbjct: 535 AMQDTLQELDLSD-SHLTQVPLAVLLYCSHLQYFDLSSNSLRVLPTEI 581



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 122/282 (43%), Gaps = 52/282 (18%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  +++  LP ++  L  L+EL L  N L +LP  IG + NL  L L  N L  LP+   
Sbjct: 402 LHHNALHELPEAIGNLEMLQELDLAHNSLVTLPESIGMLRNLKTLTLVSNQLRLLPNEFG 461

Query: 168 NLQQLRVLDLRHNK--------LNELPMVVY-----------------KLTSLKILYLRF 202
           +L QLR LDL +N            LP V +                 K + ++ L L  
Sbjct: 462 SLSQLRHLDLDNNPKLITLEAFFRHLPSVEFLSASSCGIVTFASLDFLKDSPVEKLRLNH 521

Query: 203 NRIKTV-----HPDIQ----------------------YLSNLSMLSMRDNKIRELPPEL 235
           N ++       H  +Q                      Y S+L    +  N +R LP E+
Sbjct: 522 NALQEFPLLIGHAAMQDTLQELDLSDSHLTQVPLAVLLYCSHLQYFDLSSNSLRVLPTEI 581

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
           G L+ L  L+L+ N L+ LP E+     L  L   HN+L  +P  LGNL+ LT+L +S+N
Sbjct: 582 GHLRRLEVLNLSSNTLQALPDELTQLPRLRQLKCDHNQLGQLPLRLGNLVQLTKLNVSFN 641

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           RL S+P +L +   L         +++ P  L       NNI
Sbjct: 642 RLRSMPTSLMEMTQLQSLYASDNLMATPPPALNCYCDFSNNI 683


>gi|24215665|ref|NP_713146.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074857|ref|YP_005989175.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196830|gb|AAN50164.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458647|gb|AER03192.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 408

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 138/394 (35%), Positives = 212/394 (53%), Gaps = 32/394 (8%)

Query: 145 YVTNLTCLGLAENS------LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL 198
           +V +LT     EN        T+L ++L N  ++R+LDL  +KL  LP  + +L +L+IL
Sbjct: 21  FVCSLTQFHAEENHTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQIL 80

Query: 199 YLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
               N++ T+  +I  L NL  L +++N++  LP E+G+L+NL  L L +N L  LP+EI
Sbjct: 81  NSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEI 140

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
           G    L  L+L  N L  +P  +G L NL  L LS NRL  +PE + +   L + ++ G 
Sbjct: 141 GKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGG- 199

Query: 319 ALSSLPDGLLSSLTSINNITLSRNK-FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
                                 +NK FT  P    TQ  ++  ++ + N++  +P  I  
Sbjct: 200 ----------------------KNKPFTILPKE-ITQLQNLQELHLKFNRLTVLPKEI-G 235

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           + +NL  +++  N LT LP ++G    L  L+L  NQ++ L ++I  L NL+ L L  N 
Sbjct: 236 QLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNR 295

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
            +  P  I   + L+ LDL +N+L +LP EIG L+ LQ+L L  NQL +LP+ IG L  L
Sbjct: 296 FEAFPKEITQFQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKL 355

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
             L +  N L ++PEEI  L+NL  LYL++N  L
Sbjct: 356 ESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLL 389



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 124/348 (35%), Positives = 193/348 (55%), Gaps = 7/348 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+S +  LP  + +L +L+ L    N+L +LP +IG + NL  L L  N LT+LP+ 
Sbjct: 57  LDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEE 116

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+VL L +N+L  LP  + KL +L+ L L  NR+  +  +I  L NL  L +  
Sbjct: 117 IGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSL 176

Query: 226 NKIRELPPELGELKNLVTLDLAHNH--LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
           N++  LP E+G+L++L  L L   +     LPKEI     L  L L+ N L  +P  +G 
Sbjct: 177 NRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQ 236

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L NL  L L  NRL  +P+ + +  +L   ++ G  L+ LP   ++ L ++  + L  N+
Sbjct: 237 LQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKE-ITQLQNLQELNLEYNR 295

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
           F A+P    TQF ++  ++   N++  +P  I  + +NL K+++  N LT+LP ++G   
Sbjct: 296 FEAFPK-EITQFQNLQVLDLYQNRLTTLPKEI-GQLQNLQKLHLSRNQLTTLPKEIGRLQ 353

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
            L  L L  NQ++ L E+I+ L NL+ L L NN L  L   I  +RKL
Sbjct: 354 KLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPL--LSEKIERIRKL 399



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 172/319 (53%), Gaps = 28/319 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+   + +T LP  + KL +L+EL+L  N+L +LP +IG + NL  L L  N LT
Sbjct: 75  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 134

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK-------------- 206
           +LP+ +  LQ L+ L+L  N+LN LP  + +L +L+ LYL  NR+               
Sbjct: 135 TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRK 194

Query: 207 ----------TVHP-DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
                     T+ P +I  L NL  L ++ N++  LP E+G+L+NL  LDL  N L  LP
Sbjct: 195 LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILP 254

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
           KEIG    L+ LDL  N+L  +P  +  L NL  L L YNR E+ P+ +++  +L   ++
Sbjct: 255 KEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDL 314

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
               L++LP   +  L ++  + LSRN+ T  P     +   + S+  +HNQ+  +P  I
Sbjct: 315 YQNRLTTLPKE-IGQLQNLQKLHLSRNQLTTLPK-EIGRLQKLESLGLDHNQLATLPEEI 372

Query: 376 FSRAKNLSKVNMKDNLLTS 394
             + KNL K+ + +N L S
Sbjct: 373 -KQLKNLKKLYLHNNPLLS 390



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/344 (34%), Positives = 180/344 (52%), Gaps = 25/344 (7%)

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           + +L +  +K++ LP E+G+L+NL  L+  +N L  LPKEIG    L  L LQ+N+L  +
Sbjct: 54  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 113

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P+ +G L NL  L L+ N+L ++PE + K  +L E N+    L+ LP  +   L ++  +
Sbjct: 114 PEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI-GRLQNLQEL 172

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            LS N+ T  P                         G     + LS +  K+   T LP 
Sbjct: 173 YLSLNRLTILPE----------------------EIGQLESLRKLS-LGGKNKPFTILPK 209

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++     L EL+L  N+++ L ++I  L NL +L L  N L  LP  IG L+ L  LDL 
Sbjct: 210 EITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLS 269

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
            N+L  LP EI  L+ LQ L L+ N+  + P+ I    NL  L + +N L ++P+EIG L
Sbjct: 270 GNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPKEIGQL 329

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +NL  L+L+ N  L  +P E+     L+ + LD+  L+ +P EI
Sbjct: 330 QNLQKLHLSRNQ-LTTLPKEIGRLQKLESLGLDHNQLATLPEEI 372



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 119/360 (33%), Positives = 193/360 (53%), Gaps = 28/360 (7%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L  +KL  LP +IG + NL  L    N LT+LP  +  LQ L+ L L++N+L  LP  
Sbjct: 57  LDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEE 116

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +LK+L+L  N++ T+  +I  L NL  L++  N++  LP E+G L+NL  L L+ 
Sbjct: 117 IGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSL 176

Query: 249 NHLEELPKEIGNCTMLVTLDL--QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK 306
           N L  LP+EIG    L  L L  ++     +P  +  L NL  L L +NRL  +P+ + +
Sbjct: 177 NRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQ 236

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
             +L   ++    L+ LP   +  L ++  + LS N+ T  P    TQ  ++  +N E+N
Sbjct: 237 LQNLRILDLYQNRLTILPKE-IGQLKNLLVLDLSGNQLTILPK-EITQLQNLQELNLEYN 294

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
           + +  P  I ++ +NL  +++  N LT+LP ++G    L +L+L  NQ++ L ++I    
Sbjct: 295 RFEAFPKEI-TQFQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEI---- 349

Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
                              G L+KL+ L L+ N+L +LP EI  LK L++L L +N L+S
Sbjct: 350 -------------------GRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLLS 390



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 116/201 (57%), Gaps = 5/201 (2%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
            T LP  + +L +L+EL+L  N+L  LP +IG + NL  L L +N LT LP  +  L+ L
Sbjct: 204 FTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNL 263

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            VLDL  N+L  LP  + +L +L+ L L +NR +    +I    NL +L +  N++  LP
Sbjct: 264 LVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLP 323

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            E+G+L+NL  L L+ N L  LPKEIG    L +L L HN+L  +P+ +  L NL +L L
Sbjct: 324 KEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYL 383

Query: 293 SYN-----RLESVPETLSKCV 308
             N     ++E + + L +C+
Sbjct: 384 HNNPLLSEKIERIRKLLPQCI 404



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 123/249 (49%), Gaps = 25/249 (10%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYV------------ 146
           K +N+  L+L  + +  LP  + +L +L+ELYL  N+L  LP +IG +            
Sbjct: 142 KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKN 201

Query: 147 -------------TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLT 193
                         NL  L L  N LT LP  +  LQ LR+LDL  N+L  LP  + +L 
Sbjct: 202 KPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLK 261

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           +L +L L  N++  +  +I  L NL  L++  N+    P E+ + +NL  LDL  N L  
Sbjct: 262 NLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTT 321

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LPKEIG    L  L L  N+L  +P  +G L  L  L L +N+L ++PE + +  +L + 
Sbjct: 322 LPKEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKL 381

Query: 314 NVEGCALSS 322
            +    L S
Sbjct: 382 YLHNNPLLS 390



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/146 (44%), Positives = 89/146 (60%), Gaps = 1/146 (0%)

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           + L+E ++N   + +L LS + LK LP  IG L+ L+ L+ E N+L +LP EIG L+ LQ
Sbjct: 42  TNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQ 101

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
            L LQ+NQL +LP  IG L NL  L +  N L ++PEEIG L+NL  L L  N  LN +P
Sbjct: 102 ELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNR-LNILP 160

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEI 561
            E+    NLQ + L    L+ +P EI
Sbjct: 161 KEIGRLQNLQELYLSLNRLTILPEEI 186


>gi|55628956|ref|XP_527815.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Pan troglodytes]
          Length = 860

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 246/505 (48%), Gaps = 53/505 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++S + I+H+P  + +L ++ +L+ Y N + + P+ +  + NL  L L +N L  +PD+
Sbjct: 216 LNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPTDLECLGNLEILSLGKNKLRHIPDT 275

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L +L+ LRVL+L +N+L   P  +  L  L  L L  N I ++  +I+ L NL  L M  
Sbjct: 276 LPSLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLMDH 335

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLE-----------------------ELPKEIGNCT 262
           NK+  L  E+ +L  +  L LA N LE                        +P++I  C 
Sbjct: 336 NKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKISCCA 395

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           ML  L L  N+L  +P  +  L NL +L ++ N +  + +++S   ++      G  ++ 
Sbjct: 396 MLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKITDSISHLNNICSLEFSGNIITD 455

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P   + +   I  I LS NK   +P  G     S+Y ++   N I +IP  I S +K L
Sbjct: 456 VPIE-IKNCQKIIKIELSYNKIMYFPL-GLCALDSLYYLSVNGNYISEIPVDI-SFSKQL 512

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + + +N L        + + L  L+LG NQI K+   I N+++L VL+L  N  +  P
Sbjct: 513 LHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFP 572

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV----------------- 485
             +  L  L+ LDL EN+L+ + ++I  LK +Q+L L SNQ +                 
Sbjct: 573 RELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNLSSNQFIHFPIELCQLQSLEQLNI 632

Query: 486 ---------SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
                     LP  + ++T L  L +  N ++ IP  IG L NL +L+  +N  ++ +P 
Sbjct: 633 SQIKGRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQ-ISYLPP 691

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEI 561
            L   ++LQ ++L    L+ +PS I
Sbjct: 692 SLLSLNDLQQLNLSGNNLTALPSAI 716



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 193/413 (46%), Gaps = 46/413 (11%)

Query: 152 LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH-P 210
           LGL E++ T              ++L    L E P  + K+  +K LYL  N+IKT    
Sbjct: 137 LGLGEDNFT--------------VNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGA 182

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L  L +LS+++N +  LP E+  L NL  L+++HNH+  +PKEI     +  L   
Sbjct: 183 DSGDLLGLEILSLQENGLSSLPSEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFY 242

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           +N + N P  L  L NL  L L  N+L  +P+TL    +L   N+E   L+  P  L   
Sbjct: 243 NNYIENFPTDLECLGNLEILSLGKNKLRHIPDTLPSLKNLRVLNLEYNQLTIFPKALCF- 301

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
                                      + S++   N I  +P  I    KNL  + M  N
Sbjct: 302 ------------------------LPKLISLDLTGNLISSLPKEI-RELKNLETLLMDHN 336

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            LT L +++   + + EL L  N++  +S  I+N   L +L+L  NLLK +P  I     
Sbjct: 337 KLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKISCCAM 396

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L+CL L +NKL  LP  I  L  L++L +  N +V +  +I HL N+  L    N +  +
Sbjct: 397 LECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKITDSISHLNNICSLEFSGNIITDV 456

Query: 511 PEEIGTLENLHTLYLNDNTCLNNIPFELALCS--NLQIMSLDNCPLSQIPSEI 561
           P EI   + +  + L+ N  +    F L LC+  +L  +S++   +S+IP +I
Sbjct: 457 PIEIKNCQKIIKIELSYNKIM---YFPLGLCALDSLYYLSVNGNYISEIPVDI 506



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 225/452 (49%), Gaps = 29/452 (6%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C    +++LDL+ + I+ LP  + +L +LE L +  NKL  L  +I  +  +  L LA+N
Sbjct: 300 CFLPKLISLDLTGNLISSLPKEIRELKNLETLLMDHNKLTFLAVEIFQLLKIKELQLADN 359

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L  +   + N ++LR+L L  N L  +P  +     L+ L L  N++  +   I  L+N
Sbjct: 360 KLEVISHKIENFRELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNN 419

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N + ++   +  L N+ +L+ + N + ++P EI NC  ++ ++L +N+++  
Sbjct: 420 LRKLHVNRNNMVKITDSISHLNNICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYF 479

Query: 278 P------DML------GNLIN-----------LTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P      D L      GN I+           L  L LS N+L    E     ++L   +
Sbjct: 480 PLGLCALDSLYYLSVNGNYISEIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLD 539

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +    +  +P  + S++ S++ + L  NKF  +P    T   ++  ++   NQ+ KI   
Sbjct: 540 LGKNQIKKIPASI-SNMISLHVLILCCNKFETFPRELCT-LENLQVLDLSENQLQKISSD 597

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT---NQISKLSEDIQNLVNLEVL 431
           I    K + K+N+  N     P++L     L +LN+      ++++L  ++ N+  L+ L
Sbjct: 598 I-CNLKGIQKLNLSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKEL 656

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            +SNN ++++P +IG LR L  L    N++  LP  +  L +LQ+L L  N L +LP AI
Sbjct: 657 DISNNAIREIPRNIGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSAI 716

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
            +L +L  ++  +N L   P EI   + L+T+
Sbjct: 717 YNLFSLKEINFDDNPLLRPPMEICKGKQLYTI 748


>gi|359683881|ref|ZP_09253882.1| lipoprotein [Leptospira santarosai str. 2000030832]
          Length = 440

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 140/390 (35%), Positives = 214/390 (54%), Gaps = 6/390 (1%)

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           ++L N   +R+L L  N+L  LP  + +L  L+ L LR N+   +  +I  L NL  LS+
Sbjct: 32  EALKNAMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSL 91

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
             N++  LP E+G L+NL  L L +NHL  LPKEIG    L  LDL +N L ++P  +G 
Sbjct: 92  ESNRLEGLPKEIGRLQNLKRLSLVNNHLTTLPKEIGMLQNLQNLDLIYNRLESLPKEIGQ 151

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L NL RL L  N L ++P+ + +  +L   ++ G  L+ LP   + +L  + ++ LS   
Sbjct: 152 LQNLKRLYLVDNHLTTLPQEIWQLENLQTLSISGNQLTILPKE-IGTLQKLEDLNLS--G 208

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
              +P    T   ++  +   +N++   P  I    +NL ++ +    LT+ P ++G   
Sbjct: 209 LAVFPQEIGT-LQNLKGLYLSNNRLTTFPQEI-GTLQNLKELYLSSTQLTTFPKEIGQLQ 266

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            L EL L + Q+  LS++I  L NL++L LS+N     P  IG LRKL+ L LE N+L +
Sbjct: 267 KLEELYLPSTQLVTLSQEIGQLQNLKLLDLSDNQFTTFPKEIGKLRKLEYLFLEHNRLTT 326

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           LP EIG L+ L+ L L +N+L +L   I  L NL  L++  N L  +P+EIG L+NL  L
Sbjct: 327 LPKEIGTLQRLKLLNLYNNRLTTLSEEIVGLQNLKNLNLRNNRLTVLPQEIGQLQNLKDL 386

Query: 524 YLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
            L+ N      P E+    +LQI+ L+N P
Sbjct: 387 DLSGNP-FTTFPQEIVGLKHLQILRLENIP 415



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 135/376 (35%), Positives = 197/376 (52%), Gaps = 5/376 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L  + +T LP  + +L  LEEL L  N+  +LP +IG + NL  L L  N L  LP  
Sbjct: 43  LYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSLESNRLEGLPKE 102

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ L L +N L  LP  +  L +L+ L L +NR++++  +I  L NL  L + D
Sbjct: 103 IGRLQNLKRLSLVNNHLTTLPKEIGMLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYLVD 162

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N +  LP E+ +L+NL TL ++ N L  LPKEIG    L  L+L  + L   P  +G L 
Sbjct: 163 NHLTTLPQEIWQLENLQTLSISGNQLTILPKEIGTLQKLEDLNL--SGLAVFPQEIGTLQ 220

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L LS NRL + P+ +    +L E  +    L++ P   +  L  +  + L   +  
Sbjct: 221 NLKGLYLSNNRLTTFPQEIGTLQNLKELYLSSTQLTTFPKE-IGQLQKLEELYLPSTQLV 279

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
              S    Q  ++  ++   NQ    P  I  + + L  + ++ N LT+LP ++GT   L
Sbjct: 280 TL-SQEIGQLQNLKLLDLSDNQFTTFPKEI-GKLRKLEYLFLEHNRLTTLPKEIGTLQRL 337

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             LNL  N+++ LSE+I  L NL+ L L NN L  LP  IG L+ LK LDL  N   + P
Sbjct: 338 KLLNLYNNRLTTLSEEIVGLQNLKNLNLRNNRLTVLPQEIGQLQNLKDLDLSGNPFTTFP 397

Query: 466 NEIGFLKELQRLILQS 481
            EI  LK LQ L L++
Sbjct: 398 QEIVGLKHLQILRLEN 413



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 117/351 (33%), Positives = 184/351 (52%), Gaps = 14/351 (3%)

Query: 218 LSMLSMRD---NKI-RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
           L +   RD   NK+ R+    L    ++  L L  N L  LP+EIG    L  L+L++N+
Sbjct: 13  LCLFCKRDAEKNKVYRDFNEALKNAMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQ 72

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
              +P  +G L NL  L L  NRLE +P+ + +  +L   ++    L++LP   +  L +
Sbjct: 73  FTALPQEIGTLQNLQSLSLESNRLEGLPKEIGRLQNLKRLSLVNNHLTTLPKE-IGMLQN 131

Query: 334 INNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
           + N+ L  N+  + P   G       +Y ++   N +  +P  I+ + +NL  +++  N 
Sbjct: 132 LQNLDLIYNRLESLPKEIGQLQNLKRLYLVD---NHLTTLPQEIW-QLENLQTLSISGNQ 187

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           LT LP ++GT   L +LNL    ++   ++I  L NL+ L LSNN L   P  IG L+ L
Sbjct: 188 LTILPKEIGTLQKLEDLNLSG--LAVFPQEIGTLQNLKGLYLSNNRLTTFPQEIGTLQNL 245

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           K L L   +L + P EIG L++L+ L L S QLV+L + IG L NL  L + +N   + P
Sbjct: 246 KELYLSSTQLTTFPKEIGQLQKLEELYLPSTQLVTLSQEIGQLQNLKLLDLSDNQFTTFP 305

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           +EIG L  L  L+L  N  L  +P E+     L++++L N  L+ +  EIV
Sbjct: 306 KEIGKLRKLEYLFLEHNR-LTTLPKEIGTLQRLKLLNLYNNRLTTLSEEIV 355



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 114/239 (47%), Gaps = 25/239 (10%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN+  L +S + +T LP  +  L  LE+L L G  LA  P +IG + NL  L L+ N LT
Sbjct: 176 ENLQTLSISGNQLTILPKEIGTLQKLEDLNLSG--LAVFPQEIGTLQNLKGLYLSNNRLT 233

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           + P  +  LQ L+ L L   +L   P  + +L  L+ LYL   ++ T+  +I  L NL +
Sbjct: 234 TFPQEIGTLQNLKELYLSSTQLTTFPKEIGQLQKLEELYLPSTQLVTLSQEIGQLQNLKL 293

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN---- 276
           L + DN+    P E+G+L+ L  L L HN L  LPKEIG    L  L+L +N L      
Sbjct: 294 LDLSDNQFTTFPKEIGKLRKLEYLFLEHNRLTTLPKEIGTLQRLKLLNLYNNRLTTLSEE 353

Query: 277 -------------------IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE 316
                              +P  +G L NL  L LS N   + P+ +    HL    +E
Sbjct: 354 IVGLQNLKNLNLRNNRLTVLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGLKHLQILRLE 412



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 103/181 (56%), Gaps = 5/181 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L LS + +T  P  + +L  LEELYL   +L +L  +IG + NL  L L++N  T
Sbjct: 243 QNLKELYLSSTQLTTFPKEIGQLQKLEELYLPSTQLVTLSQEIGQLQNLKLLDLSDNQFT 302

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           + P  +  L++L  L L HN+L  LP  +  L  LK+L L  NR+ T+  +I  L NL  
Sbjct: 303 TFPKEIGKLRKLEYLFLEHNRLTTLPKEIGTLQRLKLLNLYNNRLTTLSEEIVGLQNLKN 362

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++R+N++  LP E+G+L+NL  LDL+ N     P+EI     L  L L+     NIP +
Sbjct: 363 LNLRNNRLTVLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGLKHLQILRLE-----NIPAL 417

Query: 281 L 281
           L
Sbjct: 418 L 418



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 109/206 (52%), Gaps = 5/206 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L LS + +T  P  +  L +L+ELYL   +L + P +IG +  L  L L    L 
Sbjct: 220 QNLKGLYLSNNRLTTFPQEIGTLQNLKELYLSSTQLTTFPKEIGQLQKLEELYLPSTQLV 279

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +L   +  LQ L++LDL  N+    P  + KL  L+ L+L  NR+ T+  +I  L  L +
Sbjct: 280 TLSQEIGQLQNLKLLDLSDNQFTTFPKEIGKLRKLEYLFLEHNRLTTLPKEIGTLQRLKL 339

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++ +N++  L  E+  L+NL  L+L +N L  LP+EIG    L  LDL  N     P  
Sbjct: 340 LNLYNNRLTTLSEEIVGLQNLKNLNLRNNRLTVLPQEIGQLQNLKDLDLSGNPFTTFPQE 399

Query: 281 LGNLINLTRLRLSYNRLESVPETLSK 306
           +  L +L  L     RLE++P  LSK
Sbjct: 400 IVGLKHLQIL-----RLENIPALLSK 420


>gi|354474057|ref|XP_003499248.1| PREDICTED: protein LAP2 [Cricetulus griseus]
          Length = 1448

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 216/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLRQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL    +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDFLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L ++E L  S N ++ LPSS+G L  ++  
Sbjct: 268 LPDTIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSVGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNFLQQLPPEIGNWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  + M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETKKMVLTNYMFPQQP 431



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 157/310 (50%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL    L+ N L++LP  IG+ 
Sbjct: 216 GNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPDTIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L ++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSVGQLTNIRTFAADHNFLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGNWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 115/222 (51%), Gaps = 25/222 (11%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            + NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I
Sbjct: 53  LDANQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENI 111

Query: 423 QN-----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           +N                       L+NL  L L++  L+ LP++ G L KL+ L+L EN
Sbjct: 112 KNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELREN 171

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L+ LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L  
Sbjct: 172 QLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLRQ 231

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L ++ N  +  +   ++ C NLQ   L +  L Q+P  I
Sbjct: 232 LTYLDVSKNN-IEMVEEGISTCENLQDFLLSSNSLQQLPDTI 272


>gi|219519899|gb|AAI45499.1| Erbb2ip protein [Mus musculus]
          Length = 1411

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 215/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIP-GFIGSLRQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL    +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDFLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L ++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L  N+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    +  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDTETQKMVLTNYMFPQQP 431



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 158/310 (50%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ L+  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL    L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L ++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGNWKNITVLFLHCNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 114/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L  L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  +   ++ C NLQ   L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMVEEGISTCENLQDFLLSSNSLQQLPETI 272


>gi|418709144|ref|ZP_13269938.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770480|gb|EKR45699.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|456970649|gb|EMG11403.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 407

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 137/393 (34%), Positives = 212/393 (53%), Gaps = 32/393 (8%)

Query: 145 YVTNLTCLGLAENS------LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL 198
           +V +LT     EN        T+L ++L N  ++R+LDL  +KL  LP  + +L +L+IL
Sbjct: 20  FVCSLTQFHAEENYTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQIL 79

Query: 199 YLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
               N++ T+  +I  L NL  L +++N++  LP E+G+L+NL  L L +N L  LP+EI
Sbjct: 80  NSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEI 139

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
           G    L  L+L  N L  +P  +G L NL  L LS NRL  +PE + +   L + ++ G 
Sbjct: 140 GKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGG- 198

Query: 319 ALSSLPDGLLSSLTSINNITLSRNK-FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
                                 +NK FT  P    TQ  ++  ++ + N++  +P  I  
Sbjct: 199 ----------------------KNKPFTILPKE-ITQLQNLQELHLKFNRLTVLPKEI-G 234

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           + +NL  +++  N LT LP ++G    L  L+L  NQ++ L ++I  L NL+ L L  N 
Sbjct: 235 QLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNR 294

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
            +  P  I   + L+ LDL +N+L +LP EIG L+ LQ+L L  NQL +LP+ IG L  L
Sbjct: 295 FEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKL 354

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
             L +  N L ++PEEI  L+NL  LYL++N+ 
Sbjct: 355 ESLGLDHNQLATLPEEIKQLKNLKKLYLHNNSL 387



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/344 (34%), Positives = 180/344 (52%), Gaps = 25/344 (7%)

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           + +L +  +K++ LP E+G+L+NL  L+  +N L  LPKEIG    L  L LQ+N+L  +
Sbjct: 53  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 112

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P+ +G L NL  L L+ N+L ++PE + K  +L E N+    L+ LP  +   L ++  +
Sbjct: 113 PEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI-GRLQNLQEL 171

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            LS N+ T  P                         G     + LS +  K+   T LP 
Sbjct: 172 YLSLNRLTILPE----------------------EIGQLESLRKLS-LGGKNKPFTILPK 208

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++     L EL+L  N+++ L ++I  L NL +L L  N L  LP  IG L+ L  LDL 
Sbjct: 209 EITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLS 268

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
            N+L  LP EI  L+ LQ L L+ N+  + P+ I    NL  L + +N L ++PEEIG L
Sbjct: 269 GNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQL 328

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +NL  L+L+ N  L  +P E+     L+ + LD+  L+ +P EI
Sbjct: 329 QNLQKLHLSRNQ-LTTLPKEIGRLQKLESLGLDHNQLATLPEEI 371



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 173/319 (54%), Gaps = 28/319 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+   + +T LP  + KL +L+EL+L  N+L +LP +IG + NL  L L  N LT
Sbjct: 74  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 133

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK-------------- 206
           +LP+ +  LQ L+ L+L  N+LN LP  + +L +L+ LYL  NR+               
Sbjct: 134 TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRK 193

Query: 207 ----------TVHP-DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
                     T+ P +I  L NL  L ++ N++  LP E+G+L+NL  LDL  N L  LP
Sbjct: 194 LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILP 253

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
           KEIG    L+ LDL  N+L  +P  +  L NL  L L YNR E+ P+ +++  +L   ++
Sbjct: 254 KEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDL 313

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
               L++LP+  +  L ++  + LSRN+ T  P     +   + S+  +HNQ+  +P  I
Sbjct: 314 YQNRLTTLPEE-IGQLQNLQKLHLSRNQLTTLPK-EIGRLQKLESLGLDHNQLATLPEEI 371

Query: 376 FSRAKNLSKVNMKDNLLTS 394
             + KNL K+ + +N L S
Sbjct: 372 -KQLKNLKKLYLHNNSLPS 389



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 117/335 (34%), Positives = 184/335 (54%), Gaps = 8/335 (2%)

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           KL  LP +IG + NL  L    N LT+LP  +  LQ L+ L L++N+L  LP  + +L +
Sbjct: 62  KLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQN 121

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           LK+L+L  N++ T+  +I  L NL  L++  N++  LP E+G L+NL  L L+ N L  L
Sbjct: 122 LKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTIL 181

Query: 255 PKEIGNCTMLVTLDL--QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           P+EIG    L  L L  ++     +P  +  L NL  L L +NRL  +P+ + +  +L  
Sbjct: 182 PEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRI 241

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            ++    L+ LP   +  L ++  + LS N+ T  P    TQ  ++  +N E+N+ +  P
Sbjct: 242 LDLYQNRLTILPKE-IGQLKNLLVLDLSGNQLTILPK-EITQLQNLQELNLEYNRFEAFP 299

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I ++ +NL  +++  N LT+LP ++G    L +L+L  NQ++ L ++I  L  LE L 
Sbjct: 300 KEI-TQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLG 358

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           L +N L  LP  I  L+ LK L L  N   SLP+E
Sbjct: 359 LDHNQLATLPEEIKQLKNLKKLYLHNN---SLPSE 390



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 116/201 (57%), Gaps = 5/201 (2%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
            T LP  + +L +L+EL+L  N+L  LP +IG + NL  L L +N LT LP  +  L+ L
Sbjct: 203 FTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNL 262

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            VLDL  N+L  LP  + +L +L+ L L +NR +    +I    NL +L +  N++  LP
Sbjct: 263 LVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLP 322

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            E+G+L+NL  L L+ N L  LPKEIG    L +L L HN+L  +P+ +  L NL +L L
Sbjct: 323 EEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYL 382

Query: 293 SYN-----RLESVPETLSKCV 308
             N     ++E + + L +C+
Sbjct: 383 HNNSLPSEKIERIRKLLPQCI 403



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 124/249 (49%), Gaps = 25/249 (10%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYV------------ 146
           K +N+  L+L  + +  LP  + +L +L+ELYL  N+L  LP +IG +            
Sbjct: 141 KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKN 200

Query: 147 -------------TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLT 193
                         NL  L L  N LT LP  +  LQ LR+LDL  N+L  LP  + +L 
Sbjct: 201 KPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLK 260

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           +L +L L  N++  +  +I  L NL  L++  N+    P E+ + +NL  LDL  N L  
Sbjct: 261 NLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTT 320

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LP+EIG    L  L L  N+L  +P  +G L  L  L L +N+L ++PE + +  +L + 
Sbjct: 321 LPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKL 380

Query: 314 NVEGCALSS 322
            +   +L S
Sbjct: 381 YLHNNSLPS 389



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/146 (44%), Positives = 89/146 (60%), Gaps = 1/146 (0%)

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           + L+E ++N   + +L LS + LK LP  IG L+ L+ L+ E N+L +LP EIG L+ LQ
Sbjct: 41  TNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQ 100

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
            L LQ+NQL +LP  IG L NL  L +  N L ++PEEIG L+NL  L L  N  LN +P
Sbjct: 101 ELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNR-LNILP 159

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEI 561
            E+    NLQ + L    L+ +P EI
Sbjct: 160 KEIGRLQNLQELYLSLNRLTILPEEI 185


>gi|341940994|sp|Q80TH2.3|LAP2_MOUSE RecName: Full=Protein LAP2; AltName: Full=Densin-180-like protein;
           AltName: Full=Erbb2-interacting protein; Short=Erbin
          Length = 1402

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 215/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIP-GFIGSLRQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL    +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDFLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L ++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L  N+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    +  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDTETQKMVLTNYMFPQQP 431



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 158/310 (50%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ L+  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL    L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L ++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGNWKNITVLFLHCNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 114/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L  L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  +   ++ C NLQ   L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMVEEGISTCENLQDFLLSSNSLQQLPETI 272


>gi|54607114|ref|NP_001005868.1| protein LAP2 isoform 1 [Mus musculus]
 gi|187954753|gb|AAI41189.1| Erbb2 interacting protein [Mus musculus]
          Length = 1450

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 215/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIP-GFIGSLRQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL    +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDFLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L ++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L  N+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    +  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDTETQKMVLTNYMFPQQP 431



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 158/310 (50%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ L+  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL    L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L ++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGNWKNITVLFLHCNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 114/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L  L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  +   ++ C NLQ   L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMVEEGISTCENLQDFLLSSNSLQQLPETI 272


>gi|260788694|ref|XP_002589384.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
 gi|229274561|gb|EEN45395.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
          Length = 936

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 148/541 (27%), Positives = 258/541 (47%), Gaps = 55/541 (10%)

Query: 85  IQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIG 144
           + A LN++ + +  +    L LDLS   +T +P  V  +T LE L +  NKL+S+P  IG
Sbjct: 1   MAAGLNLQPQTVNGR----LKLDLSNQDLTSIPEEVFDITDLEFLDVSNNKLSSIPEAIG 56

Query: 145 YVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR 204
            +  L  L    N L SLP ++ +LQ+L  L +  NKL  LP  + KL  L +L +  N+
Sbjct: 57  RLQKLYRLDADGNMLKSLPQAIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQ 116

Query: 205 IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTML 264
           +  V P +  L +L +L   +NK+   PP + +L+ L  L +  N L E+P  +     L
Sbjct: 117 LTKVPPGVCMLPSLEVLDASNNKLSTFPPGVEKLQKLRELGIDGNQLTEVPPGVFLLPNL 176

Query: 265 VTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
             LD+ +N+L   P  +  L  L  LR++ N+L  VP  +    +L   NV+   LS+ P
Sbjct: 177 EVLDVSNNKLSTFPPGVKKLQKLRELRINDNQLTEVPPGVCSLPNLEVLNVDNNNLSAFP 236

Query: 325 DGLLSSLTSINNITLSRNKFTAYPSG----------------------GPTQFTSVYSIN 362
            G +  L  +  + ++ N+ T  PSG                      G  +   +  ++
Sbjct: 237 PG-VEKLQKLRGLGINDNQLTEVPSGVCSLPNLEALGVGNNKLSTFPPGVEKLQKLRVLH 295

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
              NQ+ ++P G+ S   NL  +++  N L++ P  +     L EL++  NQ++++   +
Sbjct: 296 IYGNQLTEVPSGVCS-LPNLELLHVGKNKLSTFPPGVEKLQKLRELHINDNQLTEVPSGV 354

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE------------------------- 457
            +L NLE+L +SNN +++LP+ +  L +LK LD+                          
Sbjct: 355 CSLPNLELLNVSNNPIRRLPNDVTRLTRLKNLDVHCCQFDEFPRQVLQLKTLEKLYAGQS 414

Query: 458 -ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
              K + +P+E+G L+ L  L L++N L +LP  +  L NL  + +  N   + PE +  
Sbjct: 415 VGRKFDMVPDEVGNLQHLWYLALENNLLRTLPSTMSRLHNLREVHLWNNKFDTFPEVLCE 474

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
           L  +  L +++N  +  +P  L     L+ + +   PL+  P ++   G   I+ +LK +
Sbjct: 475 LPAMEKLDISNNN-ITRLPTALHRADKLKDLDVSGNPLTYPPQDVCEQGTGAIMAFLKQE 533

Query: 577 G 577
            
Sbjct: 534 A 534


>gi|148686562|gb|EDL18509.1| Erbb2 interacting protein [Mus musculus]
 gi|219519902|gb|AAI45510.1| Erbb2ip protein [Mus musculus]
          Length = 1402

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 215/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIP-GFIGSLRQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL    +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDFLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L ++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L  N+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    +  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDTETQKMVLTNYMFPQQP 431



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 158/310 (50%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ L+  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL    L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L ++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGNWKNITVLFLHCNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 114/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L  L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  +   ++ C NLQ   L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMVEEGISTCENLQDFLLSSNSLQQLPETI 272


>gi|332206768|ref|XP_003252466.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Nomascus leucogenys]
          Length = 860

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 245/505 (48%), Gaps = 53/505 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++S + I+H+P  + +L ++ +L+ Y N + + PS +  + NL  L L +N L  +PD+
Sbjct: 216 LNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDT 275

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L +L+ LRVL+L +N+L   P  +  L  L  L L  N I ++  +I+ L NL  L +  
Sbjct: 276 LPSLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLLDH 335

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLE-----------------------ELPKEIGNCT 262
           NK+  L  E+ +L  +  L LA N LE                        +P++I  C 
Sbjct: 336 NKLTFLAVEIFQLLRIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKISCCA 395

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           ML  L L  N+L  +P  +  L NL +L ++ N +  + +++S   ++      G  ++ 
Sbjct: 396 MLECLSLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSISHLNNICSLEFSGNIITG 455

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P   + +   I  I LS NK   +P  G     S+Y +N   N I +IP  I S +K L
Sbjct: 456 VPIE-IKNCQKIIKIELSYNKIMYFPL-GLCALDSLYYLNVNGNYISEIPVDI-SFSKQL 512

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + + +N L        + + L  L+LG NQI K+   I N+++L VL+L  N  +  P
Sbjct: 513 LHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILRCNKFETFP 572

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV----------------- 485
             +  L  L+ LDL EN+L+ + ++I  LK +Q+L   SNQ +                 
Sbjct: 573 RELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNI 632

Query: 486 ---------SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
                     LP  + ++T L  L +  N ++ IP  IG L NL +L+  +N  ++ +P 
Sbjct: 633 SQIKGRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQ-ISYLPP 691

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEI 561
            L   ++LQ ++L    L+ +PS I
Sbjct: 692 SLLSLNDLQQLNLSGNNLTALPSAI 716



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 223/452 (49%), Gaps = 29/452 (6%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C    +++LDL+ + I+ LP  + +L +LE L L  NKL  L  +I  +  +  L LA+N
Sbjct: 300 CFLPKLISLDLTGNLISSLPKEIRELKNLETLLLDHNKLTFLAVEIFQLLRIKELQLADN 359

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L  +   + N ++LR+L L  N L  +P  +     L+ L L  N++  +  +I  L+N
Sbjct: 360 KLEVISHKIENFRELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKNIHKLNN 419

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N + ++   +  L N+ +L+ + N +  +P EI NC  ++ ++L +N+++  
Sbjct: 420 LRKLHVNRNNMVKITDSISHLNNICSLEFSGNIITGVPIEIKNCQKIIKIELSYNKIMYF 479

Query: 278 P------------DMLGNLIN-----------LTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P            ++ GN I+           L  L LS N+L    E     ++L   +
Sbjct: 480 PLGLCALDSLYYLNVNGNYISEIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLD 539

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +    +  +P  + S++ S++ + L  NKF  +P    T   ++  ++   NQ+ KI   
Sbjct: 540 LGKNQIKKIPASI-SNMISLHVLILRCNKFETFPRELCT-LENLQVLDLSENQLQKISSD 597

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT---NQISKLSEDIQNLVNLEVL 431
           I    K + K+N   N     P++L     L +LN+      ++++L  ++ N+  L+ L
Sbjct: 598 I-CNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKEL 656

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            +SNN ++++P +IG LR L  L    N++  LP  +  L +LQ+L L  N L +LP AI
Sbjct: 657 DISNNAIREIPRNIGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSAI 716

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
            +L +L  ++  +N L   P EI     L+T+
Sbjct: 717 YNLFSLKEINFDDNPLLRPPMEICKGRQLYTI 748



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 186/391 (47%), Gaps = 32/391 (8%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH-PDIQYLSNLSMLSMRDNKIRELP 232
            ++L    L E P  + K+  +K LYL  N+IKT    D   L  L +LS+++N +  LP
Sbjct: 145 TVNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSLP 204

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            E+  L NL  L+++HNH+  +PKEI     +  L   +N + N P  L  L NL  L L
Sbjct: 205 SEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSL 264

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
             N+L  +P+TL    +L   N+E   L+  P  L                         
Sbjct: 265 GKNKLRHIPDTLPSLKNLRVLNLEYNQLTIFPKALCF----------------------- 301

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                + S++   N I  +P  I    KNL  + +  N LT L +++   + + EL L  
Sbjct: 302 --LPKLISLDLTGNLISSLPKEI-RELKNLETLLLDHNKLTFLAVEIFQLLRIKELQLAD 358

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N++  +S  I+N   L +L+L  NLLK +P  I     L+CL L +NKL  LP  I  L 
Sbjct: 359 NKLEVISHKIENFRELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKNIHKLN 418

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            L++L +  N +V +  +I HL N+  L    N +  +P EI   + +  + L+ N  + 
Sbjct: 419 NLRKLHVNRNNMVKITDSISHLNNICSLEFSGNIITGVPIEIKNCQKIIKIELSYNKIM- 477

Query: 533 NIPFELALCS--NLQIMSLDNCPLSQIPSEI 561
              F L LC+  +L  ++++   +S+IP +I
Sbjct: 478 --YFPLGLCALDSLYYLNVNGNYISEIPVDI 506


>gi|418707299|ref|ZP_13268125.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772346|gb|EKR47534.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 400

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 126/340 (37%), Positives = 197/340 (57%), Gaps = 6/340 (1%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L + + K+  LP E+ +L+NL  LDL HN L  LPKEIG    L  L L +N+L  
Sbjct: 47  DVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTA 106

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L NL  L L+ N+L ++P  + +  +L   ++    L++LP  +   L ++  
Sbjct: 107 LPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEI-GKLENLQL 165

Query: 337 ITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
           ++L  ++ T  P   G  Q  +++ ++  HNQ+  +P  I  + +NL +  + +N LT L
Sbjct: 166 LSLYESQLTILPQEIGKLQ--NLHELDLSHNQLTILPKEI-GQLQNLQRFVLDNNQLTIL 222

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L EL LG NQ++ L ++I  L NL+  VL NN    LP  IG L+ L+ L 
Sbjct: 223 PKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELY 282

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L  N+L + P EIG L++LQ L L +NQL +LP  I  L NL  L++ EN L++IP+EIG
Sbjct: 283 LSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIG 342

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            L+NL +L L++N  L  +P E+    NLQ ++L N   S
Sbjct: 343 QLQNLKSLDLSNNQ-LTTLPKEIEQLKNLQTLNLWNNQFS 381



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/332 (35%), Positives = 195/332 (58%), Gaps = 5/332 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS+  +T LP  +++L +L+ L L  N+L +LP +IG + NL  L L  N LT+LP  
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VL L +N+L  LP  + +L +L++L L  N++ T+  +I  L NL +LS+ +
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYE 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           +++  LP E+G+L+NL  LDL+HN L  LPKEIG    L    L +N+L  +P  +G L 
Sbjct: 171 SQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQ 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L +N+L  +P+ + +  +L  F ++    + LP   +  L ++  + LS N+ T
Sbjct: 231 NLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKE-IGQLQNLQELYLSYNQLT 289

Query: 346 AYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
            +P   G  Q   + ++N  +NQ+  +P  I  + KNL  +N+ +N L ++P ++G    
Sbjct: 290 TFPKEIGKLQ--KLQTLNLWNNQLTTLPEEI-EQLKNLKTLNLSENQLKTIPQEIGQLQN 346

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
           L  L+L  NQ++ L ++I+ L NL+ L L NN
Sbjct: 347 LKSLDLSNNQLTTLPKEIEQLKNLQTLNLWNN 378



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/372 (34%), Positives = 200/372 (53%), Gaps = 7/372 (1%)

Query: 145 YVTNLTCLGLAE--NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           +  +L+C   AE   +   L  +L N   +RVL L   KL  LP  + +L +LK+L L  
Sbjct: 19  FFIHLSCEIQAEEPGTYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGH 78

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N++  +  +I  L NL +L +  N++  LP E+G+LKNL  L L +N L  LP EI    
Sbjct: 79  NQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLK 138

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  LDL +N+L  +P  +G L NL  L L  ++L  +P+ + K  +L+E ++    L+ 
Sbjct: 139 NLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTI 198

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
           LP   +  L ++    L  N+ T  P   G  Q  +++ +   HNQ+  +P  I  + +N
Sbjct: 199 LPKE-IGQLQNLQRFVLDNNQLTILPKEIGKLQ--NLHELYLGHNQLTILPKEI-GQLQN 254

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           L +  + +N  T LP ++G    L EL L  NQ++   ++I  L  L+ L L NN L  L
Sbjct: 255 LQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTL 314

Query: 442 PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLS 501
           P  I  L+ LK L+L EN+L+++P EIG L+ L+ L L +NQL +LP+ I  L NL  L+
Sbjct: 315 PEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEIEQLKNLQTLN 374

Query: 502 VGENNLQSIPEE 513
           +  N   S  +E
Sbjct: 375 LWNNQFSSQEKE 386



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 142/246 (57%), Gaps = 1/246 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  + KL +L+ L LY ++L  LP +IG + NL  L L+ N LT
Sbjct: 138 KNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLT 197

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+   L +N+L  LP  + KL +L  LYL  N++  +  +I  L NL  
Sbjct: 198 ILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQR 257

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
             + +N+   LP E+G+L+NL  L L++N L   PKEIG    L TL+L +N+L  +P+ 
Sbjct: 258 FVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEE 317

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L LS N+L+++P+ + +  +L   ++    L++LP   +  L ++  + L 
Sbjct: 318 IEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLPKE-IEQLKNLQTLNLW 376

Query: 341 RNKFTA 346
            N+F++
Sbjct: 377 NNQFSS 382



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/243 (37%), Positives = 133/243 (54%), Gaps = 4/243 (1%)

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
            L++LP  +   L ++  + L  N+ TA P     Q  ++  +   +NQ+  +P  I  +
Sbjct: 57  KLTTLPKEI-KQLQNLKLLDLGHNQLTALPKE-IGQLKNLQLLILYYNQLTALPKEI-GQ 113

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
            KNL  + + +N LT+LP ++     L  L+LG NQ++ L ++I  L NL++L L  + L
Sbjct: 114 LKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQL 173

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
             LP  IG L+ L  LDL  N+L  LP EIG L+ LQR +L +NQL  LP+ IG L NL 
Sbjct: 174 TILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLH 233

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +G N L  +P+EIG L+NL    L DN     +P E+    NLQ + L    L+  P
Sbjct: 234 ELYLGHNQLTILPKEIGQLQNLQRFVL-DNNQFTILPKEIGQLQNLQELYLSYNQLTTFP 292

Query: 559 SEI 561
            EI
Sbjct: 293 KEI 295



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 122/224 (54%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  L L +S +T LP  + KL +L EL L  N+L  LP +IG + NL    L  N 
Sbjct: 159 KLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQ 218

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT LP  +  LQ L  L L HN+L  LP  + +L +L+   L  N+   +  +I  L NL
Sbjct: 219 LTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNL 278

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L +  N++   P E+G+L+ L TL+L +N L  LP+EI     L TL+L  N+L  IP
Sbjct: 279 QELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIP 338

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
             +G L NL  L LS N+L ++P+ + +  +L   N+     SS
Sbjct: 339 QEIGQLQNLKSLDLSNNQLTTLPKEIEQLKNLQTLNLWNNQFSS 382



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/151 (45%), Positives = 91/151 (60%), Gaps = 3/151 (1%)

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
           GT Q   L++ +QN +++ VL+LS   L  LP  I  L+ LK LDL  N+L +LP EIG 
Sbjct: 33  GTYQ--DLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQ 90

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           LK LQ LIL  NQL +LP+ IG L NL  L +  N L ++P EI  L+NL  L L +N  
Sbjct: 91  LKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQ- 149

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  +P E+    NLQ++SL    L+ +P EI
Sbjct: 150 LTTLPKEIGKLENLQLLSLYESQLTILPQEI 180



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 93/159 (58%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L L  + +T LP  + +L +L+   L  N+   LP +IG + NL  L L+ N 
Sbjct: 228 KLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQ 287

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+ P  +  LQ+L+ L+L +N+L  LP  + +L +LK L L  N++KT+  +I  L NL
Sbjct: 288 LTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNL 347

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
             L + +N++  LP E+ +LKNL TL+L +N      KE
Sbjct: 348 KSLDLSNNQLTTLPKEIEQLKNLQTLNLWNNQFSSQEKE 386


>gi|260788642|ref|XP_002589358.1| hypothetical protein BRAFLDRAFT_77807 [Branchiostoma floridae]
 gi|229274535|gb|EEN45369.1| hypothetical protein BRAFLDRAFT_77807 [Branchiostoma floridae]
          Length = 931

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 234/474 (49%), Gaps = 4/474 (0%)

Query: 104 LNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLP 163
           L LDL+   +T +P  V  +T LE L L  NKL S+P  IG +  L  L +  N LTSLP
Sbjct: 16  LTLDLTNQGLTSIPEEVFDITDLEALDLSNNKLTSIPEAIGRLQKLYRLEVHANMLTSLP 75

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
            ++  LQ+L  L +  NKL  LP  + KL  L +L +  N++  V P +  L +L  L +
Sbjct: 76  QAIVTLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVPPGVCMLPSLEELDV 135

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
             NK+   PP + +L+ L  L +  N L E+P  + +   L  L + +N+L   P  +  
Sbjct: 136 SKNKLSTFPPGVEKLQKLRKLYIYDNQLTEVPSGVCSLPNLEVLGVGNNKLSTFPPGVEK 195

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L  L  L +  N+L  VP  +    +L   N     LS+ P G +  L  + ++ +  N+
Sbjct: 196 LQKLRELNIYGNQLTEVPPGVCSLPNLEVLNFGNNKLSTFPPG-VEKLQKLRDLYIYDNQ 254

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
            T  PS G     ++  ++  +N++   P G+  + + L ++ + +N LT +P  + +  
Sbjct: 255 LTEVPS-GVCSLPNLEGLSVYNNKLSTFPPGV-EKLQKLRELYIHNNQLTEVPSGVCSLP 312

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            L  L++G N I +L +D+  L  L+ L + N    + P  +  L+ L+ L     K + 
Sbjct: 313 NLEVLSVGMNPIRRLPDDVTRLTRLKTLGVPNCQFDEFPRQMLQLKTLQKLYAGGCKFDM 372

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           +P+E+G L+ L  L +++N L +LP  + HL NL  + +  N   ++PE +  L  +  L
Sbjct: 373 VPDEVGNLQHLWFLAVENNLLRTLPSTMSHLHNLRVIQLWNNKFDTVPEVLCELPAMEKL 432

Query: 524 YLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQG 577
            + +N  +  +P  L     L+ + +   PL+  P ++   G   I+ +LK + 
Sbjct: 433 VIRNNN-ITRLPTVLHRADKLRDLDISGNPLTYPPQDVCKQGTGAIMAFLKQEA 485



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 177/371 (47%), Gaps = 26/371 (7%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   ++  LD+SK+ ++  PP VEKL  L +LY+Y N+L  +PS +  + NL  LG+  N
Sbjct: 125 CMLPSLEELDVSKNKLSTFPPGVEKLQKLRKLYIYDNQLTEVPSGVCSLPNLEVLGVGNN 184

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L++ P  +  LQ+LR L++  N+L E+P  V  L +L++L    N++ T  P ++ L  
Sbjct: 185 KLSTFPPGVEKLQKLRELNIYGNQLTEVPPGVCSLPNLEVLNFGNNKLSTFPPGVEKLQK 244

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L + DN++ E+P  +  L NL  L + +N L   P  +     L  L + +N+L  +
Sbjct: 245 LRDLYIYDNQLTEVPSGVCSLPNLEGLSVYNNKLSTFPPGVEKLQKLRELYIHNNQLTEV 304

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  + +L NL  L +  N +  +P+ +++   L    V  C     P  +L  L ++  +
Sbjct: 305 PSGVCSLPNLEVLSVGMNPIRRLPDDVTRLTRLKTLGVPNCQFDEFPRQML-QLKTLQKL 363

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
                KF   P                 +++  + +  F   +N        NLL +LP 
Sbjct: 364 YAGGCKFDMVP-----------------DEVGNLQHLWFLAVEN--------NLLRTLPS 398

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
            +     L  + L  N+   + E +  L  +E LV+ NN + +LP+ +    KL+ LD+ 
Sbjct: 399 TMSHLHNLRVIQLWNNKFDTVPEVLCELPAMEKLVIRNNNITRLPTVLHRADKLRDLDIS 458

Query: 458 ENKLESLPNEI 468
            N L   P ++
Sbjct: 459 GNPLTYPPQDV 469



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 24/181 (13%)

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           G   L+L    ++ + E++ ++ +LE L LSNN L  +P +IG L+KL  L++  N L S
Sbjct: 14  GRLTLDLTNQGLTSIPEEVFDITDLEALDLSNNKLTSIPEAIGRLQKLYRLEVHANMLTS 73

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP---------EEI 514
           LP  I  L++L  L +  N+L +LP  I  L  L+ LS+ +N L  +P         EE+
Sbjct: 74  LPQAIVTLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVPPGVCMLPSLEEL 133

Query: 515 GT--------------LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
                           L+ L  LY+ DN  L  +P  +    NL+++ + N  LS  P  
Sbjct: 134 DVSKNKLSTFPPGVEKLQKLRKLYIYDNQ-LTEVPSGVCSLPNLEVLGVGNNKLSTFPPG 192

Query: 561 I 561
           +
Sbjct: 193 V 193


>gi|418668175|ref|ZP_13229578.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756032|gb|EKR17659.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 402

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 132/363 (36%), Positives = 202/363 (55%), Gaps = 27/363 (7%)

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L+   LT+LP  +  LQ L+ LDL +N+   LP  + +L +L+ L L  N++ T+  
Sbjct: 52  VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLTTLPK 111

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           +I+ L NL  L +  N++  L  E+G+L+NL  L L +N L  LPKEI     L TL L 
Sbjct: 112 EIEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGLG 171

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           +N++  IP+ +  L NL +L L YN+++++P+ + +  +L E N+    L +LP  +   
Sbjct: 172 NNQIKIIPNGIWQLQNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQLKTLPKEI-EQ 230

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           L ++  + L  N+ T  P                 N+I+++        KNL  +++  N
Sbjct: 231 LKNLQTLHLGSNQLTTLP-----------------NEIEQL--------KNLQTLDLYYN 265

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            LT+LP ++G    L EL+L  NQ++ L ++I  L NL+ L L NN L  LP  IG L+ 
Sbjct: 266 QLTTLPQEIGQLQNLQELSLYYNQLTALPKEIGQLQNLKSLDLRNNQLTTLPIEIGQLQN 325

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           LK LDL  N+L +LP EIG L+ L+ L L++NQL  LP+ IG L NL  L +  N L SI
Sbjct: 326 LKSLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQLTILPKEIGQLKNLQELYLNNNQL-SI 384

Query: 511 PEE 513
            E+
Sbjct: 385 EEK 387



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/335 (36%), Positives = 191/335 (57%), Gaps = 3/335 (0%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
            +++L L   ++ T+  +I+ L NL  L + +N+ + LP E+G+L+NL  L+L +N L  
Sbjct: 49  DVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLTT 108

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LPKEI     L TL L +N+L  +   +G L NL  L L+ N+L ++P+ + +  +L   
Sbjct: 109 LPKEIEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQTL 168

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
            +    +  +P+G+   L ++  + L  N+    P     Q  ++  +N  +NQ+  +P 
Sbjct: 169 GLGNNQIKIIPNGIWQ-LQNLQKLYLDYNQIKTIPKE-IGQLQNLQELNLWNNQLKTLPK 226

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
            I  + KNL  +++  N LT+LP ++     L  L+L  NQ++ L ++I  L NL+ L L
Sbjct: 227 EI-EQLKNLQTLHLGSNQLTTLPNEIEQLKNLQTLDLYYNQLTTLPQEIGQLQNLQELSL 285

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
             N L  LP  IG L+ LK LDL  N+L +LP EIG L+ L+ L L++NQL +LP  IG 
Sbjct: 286 YYNQLTALPKEIGQLQNLKSLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQLTTLPIEIGQ 345

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L NL  L +  N L  +P+EIG L+NL  LYLN+N
Sbjct: 346 LQNLKSLDLRNNQLTILPKEIGQLKNLQELYLNNN 380



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/316 (35%), Positives = 184/316 (58%), Gaps = 3/316 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +LDL+ +    LP  + +L +L+EL L+ N+L +LP +I  + NL  LGL  N LT
Sbjct: 71  QNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLTTLPKEIEQLKNLQTLGLGYNQLT 130

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +L   +  LQ L+VL L +N+L  LP  + +L +L+ L L  N+IK +   I  L NL  
Sbjct: 131 TLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGLGNNQIKIIPNGIWQLQNLQK 190

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+I+ +P E+G+L+NL  L+L +N L+ LPKEI     L TL L  N+L  +P+ 
Sbjct: 191 LYLDYNQIKTIPKEIGQLQNLQELNLWNNQLKTLPKEIEQLKNLQTLHLGSNQLTTLPNE 250

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L YN+L ++P+ + +  +L E ++    L++LP   +  L ++ ++ L 
Sbjct: 251 IEQLKNLQTLDLYYNQLTTLPQEIGQLQNLQELSLYYNQLTALPKE-IGQLQNLKSLDLR 309

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P     Q  ++ S++  +NQ+  +P  I  + +NL  +++++N LT LP ++G
Sbjct: 310 NNQLTTLPI-EIGQLQNLKSLDLRNNQLTTLPIEI-GQLQNLKSLDLRNNQLTILPKEIG 367

Query: 401 TWVGLTELNLGTNQIS 416
               L EL L  NQ+S
Sbjct: 368 QLKNLQELYLNNNQLS 383



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/333 (33%), Positives = 195/333 (58%), Gaps = 3/333 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  +++L +L+ L L  N+  +LP +IG + NL  L L  N LT+LP  
Sbjct: 53  LNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLTTLPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L +N+L  L   + +L +LK+L+L  N++ T+  +I+ L NL  L + +
Sbjct: 113 IEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGLGN 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I+ +P  + +L+NL  L L +N ++ +PKEIG    L  L+L +N+L  +P  +  L 
Sbjct: 173 NQIKIIPNGIWQLQNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQLKTLPKEIEQLK 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L ++P  + +  +L   ++    L++LP   +  L ++  ++L  N+ T
Sbjct: 233 NLQTLHLGSNQLTTLPNEIEQLKNLQTLDLYYNQLTTLPQE-IGQLQNLQELSLYYNQLT 291

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           A P     Q  ++ S++  +NQ+  +P  I  + +NL  +++++N LT+LP+++G    L
Sbjct: 292 ALPK-EIGQLQNLKSLDLRNNQLTTLPIEI-GQLQNLKSLDLRNNQLTTLPIEIGQLQNL 349

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
             L+L  NQ++ L ++I  L NL+ L L+NN L
Sbjct: 350 KSLDLRNNQLTILPKEIGQLKNLQELYLNNNQL 382



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/319 (36%), Positives = 179/319 (56%), Gaps = 4/319 (1%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            L+L+   L  LPKEI     L +LDL +N+   +P  +G L NL  L L  N+L ++P+
Sbjct: 52  VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLTTLPK 111

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + +  +L    +    L++L    +  L ++  + L+ N+ T  P     Q  ++ ++ 
Sbjct: 112 EIEQLKNLQTLGLGYNQLTTLSQE-IGQLQNLKVLFLNNNQLTTLPK-EIEQLKNLQTLG 169

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQI  IP GI+ + +NL K+ +  N + ++P ++G    L ELNL  NQ+  L ++I
Sbjct: 170 LGNNQIKIIPNGIW-QLQNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQLKTLPKEI 228

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
           + L NL+ L L +N L  LP+ I  L+ L+ LDL  N+L +LP EIG L+ LQ L L  N
Sbjct: 229 EQLKNLQTLHLGSNQLTTLPNEIEQLKNLQTLDLYYNQLTTLPQEIGQLQNLQELSLYYN 288

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL +LP+ IG L NL  L +  N L ++P EIG L+NL +L L +N  L  +P E+    
Sbjct: 289 QLTALPKEIGQLQNLKSLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQ-LTTLPIEIGQLQ 347

Query: 543 NLQIMSLDNCPLSQIPSEI 561
           NL+ + L N  L+ +P EI
Sbjct: 348 NLKSLDLRNNQLTILPKEI 366



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 89/144 (61%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L++ ++N +++ VL LS+  L  LP  I  L+ LK LDL  N+ ++LP EIG L+ LQ L
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQEL 99

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L +NQL +LP+ I  L NL  L +G N L ++ +EIG L+NL  L+LN+N  L  +P E
Sbjct: 100 NLWNNQLTTLPKEIEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQ-LTTLPKE 158

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    NLQ + L N  +  IP+ I
Sbjct: 159 IEQLKNLQTLGLGNNQIKIIPNGI 182



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N   ++ L+L   KL +LP EI  L+ L+ L L +NQ  +LP+ IG L NL 
Sbjct: 38  RDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQ 97

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L++  N L ++P+EI  L+NL TL L  N  L  +  E+    NL+++ L+N  L+ +P
Sbjct: 98  ELNLWNNQLTTLPKEIEQLKNLQTLGLGYNQ-LTTLSQEIGQLQNLKVLFLNNNQLTTLP 156

Query: 559 SEI 561
            EI
Sbjct: 157 KEI 159


>gi|293357166|ref|XP_002729094.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like, partial [Rattus norvegicus]
          Length = 590

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 235/477 (49%), Gaps = 37/477 (7%)

Query: 70  PESNKPKPTTKKKEPIQAD----LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTH 125
           P+ N P   T +   I         I  E L  KE  +  + L  + I+ +P  ++ L  
Sbjct: 45  PQRNDPHRVTDRTFFIDGSNQNLKTIPPEILALKE--LEEVHLENNQISEIPQGIQHLEK 102

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAEN------------------------SLTS 161
           ++ LYL+ N L +L  ++G ++NL  L L+ N                         LT 
Sbjct: 103 IKVLYLHNNSLQNLCQELGSLSNLESLDLSGNLLVLSSLQVICRLRTLRELRLYNTGLTE 162

Query: 162 LPDSLA-NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +P  +  +L  L +L L  N L  LP  +   T L+ +YL+ N  +    D+  L NL +
Sbjct: 163 VPSGICKSLHHLELLGLSENYLESLPKEIVNQTKLREIYLKQNHFENFPCDLCVLCNLEV 222

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           + + DNK++ +P ++G L  L    +A NHL  LP+ + +C  L  LDL HN + ++P  
Sbjct: 223 IDLDDNKLKTIPEDIGHLVRLQKFYVASNHLMGLPESLSHCRKLSVLDLTHNSIHSLPYS 282

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           L  L  LT + LS NRLE VP  L   V L+   +   +L  L       L ++  + LS
Sbjct: 283 LEQLTELTEVGLSGNRLEKVPRLLCNWVSLHLLYLRNTSLHGLRRS-FKHLVNLRFLDLS 341

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           +N    +P    T    +  +  + N++ ++P  I S +K L  + +  N   S P ++ 
Sbjct: 342 QNHIDHFPVQICT-LKDLEILALDDNKVKQLPPAISSLSK-LKILGLTGNDFVSFPEEIF 399

Query: 401 TWVGLTELNLGTNQISKLS---EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           + V L +L +G +Q SKLS   E+I+ L NL+ L + NN L++LP+S+G +  L+ LD  
Sbjct: 400 SLVSLEKLYIGQDQGSKLSSLPENIKKLTNLKELYIENNQLEQLPASLGLMPNLEVLDCR 459

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            N L  LP+ I   ++L+ L+L+ N L  LP  + HL NL  L++ +N ++  P E+
Sbjct: 460 HNLLRQLPDAICQTRDLRELLLEDNLLSRLPENLDHLVNLKVLTLTDNLMEDPPMEV 516



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 227/474 (47%), Gaps = 9/474 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +D S  ++  +PP +  L  LEE++L  N+++ +P  I ++  +  L L  NSL +L   
Sbjct: 60  IDGSNQNLKTIPPEILALKELEEVHLENNQISEIPQGIQHLEKIKVLYLHNNSLQNLCQE 119

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD--IQYLSNLSMLSM 223
           L +L  L  LDL  N L    + V            +N   T  P    + L +L +L +
Sbjct: 120 LGSLSNLESLDLSGNLLVLSSLQVICRLRTLRELRLYNTGLTEVPSGICKSLHHLELLGL 179

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
            +N +  LP E+     L  + L  NH E  P ++     L  +DL  N+L  IP+ +G+
Sbjct: 180 SENYLESLPKEIVNQTKLREIYLKQNHFENFPCDLCVLCNLEVIDLDDNKLKTIPEDIGH 239

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L+ L +  ++ N L  +PE+LS C  L+  ++   ++ SLP  L   LT +  + LS N+
Sbjct: 240 LVRLQKFYVASNHLMGLPESLSHCRKLSVLDLTHNSIHSLPYSL-EQLTELTEVGLSGNR 298

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
               P      + S++ +   +  +  +    F    NL  +++  N +   P+ + T  
Sbjct: 299 LEKVPRL-LCNWVSLHLLYLRNTSLHGLRRS-FKHLVNLRFLDLSQNHIDHFPVQICTLK 356

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN---K 460
            L  L L  N++ +L   I +L  L++L L+ N     P  I +L  L+ L + ++   K
Sbjct: 357 DLEILALDDNKVKQLPPAISSLSKLKILGLTGNDFVSFPEEIFSLVSLEKLYIGQDQGSK 416

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L SLP  I  L  L+ L +++NQL  LP ++G + NL  L    N L+ +P+ I    +L
Sbjct: 417 LSSLPENIKKLTNLKELYIENNQLEQLPASLGLMPNLEVLDCRHNLLRQLPDAICQTRDL 476

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
             L L DN  L+ +P  L    NL++++L +  +   P E+   G   I R+LK
Sbjct: 477 RELLLEDNL-LSRLPENLDHLVNLKVLTLTDNLMEDPPMEVCEQGNEAIWRHLK 529


>gi|324501497|gb|ADY40666.1| Protein lap1 [Ascaris suum]
          Length = 1224

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 129/390 (33%), Positives = 206/390 (52%), Gaps = 5/390 (1%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F  C  + I  LD  + ++  +P  +++    LEE YL  N +  L   +     L  L 
Sbjct: 8   FFACNRQ-IDVLDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLS 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L+EN +  +P  +ANL  L  L+L+ N +++LP  + + T LKIL L  N I  + P I 
Sbjct: 67  LSENEIIRVPTDIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTIT 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L++++ L + D  + ++P ++G L+NL +L++  N L  +P  I   T L  LDL HNE
Sbjct: 127 LLTSMTHLGLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNE 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L ++P  +G L NL  L +  N LE++PE++ +C  L + +V    L  LPD  +  L  
Sbjct: 187 LDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDD-IGDLEQ 245

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           +N++T+S N     P+        +  +  + N I ++   + S    LS++ + +NLLT
Sbjct: 246 LNDLTVSHNCLQVLPTSV-GHLKKLAILKVDRNAITQLTPAVGS-CTALSELYLTENLLT 303

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            +P  LG    L  LNL  NQ+ ++   I   ++L VL L +NLL++LP  IG L  L+ 
Sbjct: 304 EVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCISLSVLSLRDNLLEQLPLEIGRLENLRV 363

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           LD+  N+L  LP  I  L  LQ L L  +Q
Sbjct: 364 LDVCNNRLNFLPFTINVLFNLQALWLSESQ 393



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 189/345 (54%), Gaps = 5/345 (1%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           ++EK   RC++  +  L LS++ I  +P  +  L  LEEL L GN ++ LP +I   T L
Sbjct: 51  DLEKPLFRCRK--LKTLSLSENEIIRVPTDIANLICLEELNLKGNDVSDLPEEIKECTQL 108

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
             L L+ N +T LP ++  L  +  L L    L ++P+ +  L +L+ L +R N ++T+ 
Sbjct: 109 KILDLSSNPITRLPPTITLLTSMTHLGLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIP 168

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
           P I  L+ L  L +  N++ +LP E+G L NL  L +  N LE LP+ I  C  L  LD+
Sbjct: 169 PSISQLTQLQRLDLGHNELDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQLDV 228

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
             N+L+ +PD +G+L  L  L +S+N L+ +P ++     L    V+  A++ L    + 
Sbjct: 229 SENKLMVLPDDIGDLEQLNDLTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQLTPA-VG 287

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
           S T+++ + L+ N  T  P+       ++ ++N + NQ+ +IP  I     +LS ++++D
Sbjct: 288 SCTALSELYLTENLLTEVPTSL-GNLKALRTLNLDKNQLKEIPSTIGG-CISLSVLSLRD 345

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           NLL  LPL++G    L  L++  N+++ L   I  L NL+ L LS
Sbjct: 346 NLLEQLPLEIGRLENLRVLDVCNNRLNFLPFTINVLFNLQALWLS 390



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 193/397 (48%), Gaps = 32/397 (8%)

Query: 170 QQLRVLDLRHNKLNELPMVVYK-LTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+ VLD R   L  +P  + +   +L+  YL  N IK +   +     L  LS+ +N+I
Sbjct: 13  RQIDVLDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             +P ++  L  L  L+L  N + +LP+EI  CT L  LDL  N +  +P  +  L ++T
Sbjct: 73  IRVPTDIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L  +P  +    +L    V    L ++P  +                     
Sbjct: 133 HLGLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSI--------------------- 171

Query: 349 SGGPTQFTSVYSINFEHNQIDKIP--YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
               +Q T +  ++  HN++D +P   G+ S   NL ++ +  N L +LP  +     L 
Sbjct: 172 ----SQLTQLQRLDLGHNELDDLPSEIGLLS---NLQELYVDQNDLEALPESIVQCRSLQ 224

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
           +L++  N++  L +DI +L  L  L +S+N L+ LP+S+G+L+KL  L ++ N +  L  
Sbjct: 225 QLDVSENKLMVLPDDIGDLEQLNDLTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQLTP 284

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            +G    L  L L  N L  +P ++G+L  L  L++ +N L+ IP  IG   +L  L L 
Sbjct: 285 AVGSCTALSELYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCISLSVLSLR 344

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVV 563
           DN  L  +P E+    NL+++ + N  L+ +P  I V
Sbjct: 345 DN-LLEQLPLEIGRLENLRVLDVCNNRLNFLPFTINV 380



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 176/351 (50%), Gaps = 34/351 (9%)

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAH---NHLEELPKEIGNCTMLVTLDLQHNEL 274
           + +L  R   ++ +P ++   +N  TL+ A+   NH+++L K +  C  L TL L  NE+
Sbjct: 15  IDVLDRRQCNLQSVPNDID--RNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEI 72

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           + +P  + NLI L  L L  N +  +PE + +C  L   ++    ++ LP   ++ LTS+
Sbjct: 73  IRVPTDIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPP-TITLLTSM 131

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ L+    T  P            ++  H              +NL  + +++NLL +
Sbjct: 132 THLGLNDISLTQMP------------LDIGH-------------LRNLRSLEVRENLLRT 166

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           +P  +     L  L+LG N++  L  +I  L NL+ L +  N L+ LP SI   R L+ L
Sbjct: 167 IPPSISQLTQLQRLDLGHNELDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQL 226

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           D+ ENKL  LP++IG L++L  L +  N L  LP ++GHL  L+ L V  N +  +   +
Sbjct: 227 DVSENKLMVLPDDIGDLEQLNDLTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQLTPAV 286

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGG 565
           G+   L  LYL +N  L  +P  L     L+ ++LD   L +IPS I  GG
Sbjct: 287 GSCTALSELYLTEN-LLTEVPTSLGNLKALRTLNLDKNQLKEIPSTI--GG 334



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 108/218 (49%), Gaps = 23/218 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL  + +  LP  +  L++L+ELY+  N L +LP  I    +L  L ++EN L  LPD 
Sbjct: 180 LDLGHNELDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDD 239

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + +L+QL  L + HN L  LP  V  L  L IL +  N I  + P +   + LS L + +
Sbjct: 240 IGDLEQLNDLTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTE 299

Query: 226 NKIRELPPELGELKNLVTLDLAHNHL-----------------------EELPKEIGNCT 262
           N + E+P  LG LK L TL+L  N L                       E+LP EIG   
Sbjct: 300 NLLTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCISLSVLSLRDNLLEQLPLEIGRLE 359

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESV 300
            L  LD+ +N L  +P  +  L NL  L LS ++ +++
Sbjct: 360 NLRVLDVCNNRLNFLPFTINVLFNLQALWLSESQSQAM 397


>gi|417785421|ref|ZP_12433125.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409951286|gb|EKO05801.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 408

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 138/394 (35%), Positives = 211/394 (53%), Gaps = 32/394 (8%)

Query: 145 YVTNLTCLGLAENS------LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL 198
           +V +LT     EN        T+L ++L N  ++R+LDL  +KL  LP  + +L +L+IL
Sbjct: 21  FVCSLTQFHAEENYTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQIL 80

Query: 199 YLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
               N++ T+  +I  L NL  L +++N++  LP E+G+L+NL  L L +N L  LP+EI
Sbjct: 81  NSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEI 140

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
           G    L  L+L  N L  +P  +G L NL  L LS NRL  +PE + +   L + ++ G 
Sbjct: 141 GKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGG- 199

Query: 319 ALSSLPDGLLSSLTSINNITLSRNK-FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
                                 +NK FT  P    TQ  ++  ++ + N++  +P  I  
Sbjct: 200 ----------------------KNKPFTILPKE-ITQLQNLQELHLKFNRLTVLPKEI-G 235

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           + +NL  +++  N LT LP ++G    L  L+L  NQ++ L ++I  L NL+ L L  N 
Sbjct: 236 QLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNR 295

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
            +  P  I   + L+ LDL +N+L  LP EIG L+ LQ+L L  NQL +LP+ IG L  L
Sbjct: 296 FEAFPKEITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKL 355

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
             L +  N L ++PEEI  L+NL  LYL++N  L
Sbjct: 356 ESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLL 389



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/353 (35%), Positives = 191/353 (54%), Gaps = 30/353 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+   + +T LP  + KL +L+EL+L  N+L +LP +IG + NL  L L  N LT
Sbjct: 75  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 134

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L+L  N+LN LP  + +L +L+ LYL  NR+  +  +I  L +L  
Sbjct: 135 TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRK 194

Query: 221 LSM--RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
           LS+  ++     LP E+ +L+NL  L L  N L  LPKEIG    L  LDL  N L  +P
Sbjct: 195 LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILP 254

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L NL  L LS N+L  +P+ +++  +L E N+E                      
Sbjct: 255 KEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLE---------------------- 292

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
              N+F A+P    TQF ++  ++   N++  +P  I  + +NL K+++  N LT+LP +
Sbjct: 293 --YNRFEAFPK-EITQFQNLQVLDLYQNRLTILPEEI-GQLQNLQKLHLSRNQLTTLPKE 348

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           +G    L  L L  NQ++ L E+I+ L NL+ L L NN L  L   I  +RKL
Sbjct: 349 IGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPL--LSEKIERIRKL 399



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/344 (34%), Positives = 179/344 (52%), Gaps = 25/344 (7%)

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           + +L +  +K++ LP E+G+L+NL  L+  +N L  LPKEIG    L  L LQ+N+L  +
Sbjct: 54  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 113

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P+ +G L NL  L L+ N+L ++PE + K  +L E N+    L+ LP  +   L ++  +
Sbjct: 114 PEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI-GRLQNLQEL 172

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            LS N+ T  P                         G     + LS +  K+   T LP 
Sbjct: 173 YLSLNRLTILPE----------------------EIGQLESLRKLS-LGGKNKPFTILPK 209

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++     L EL+L  N+++ L ++I  L NL +L L  N L  LP  IG L+ L  LDL 
Sbjct: 210 EITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLS 269

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
            N+L  LP EI  L+ LQ L L+ N+  + P+ I    NL  L + +N L  +PEEIG L
Sbjct: 270 GNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTILPEEIGQL 329

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +NL  L+L+ N  L  +P E+     L+ + LD+  L+ +P EI
Sbjct: 330 QNLQKLHLSRNQ-LTTLPKEIGRLQKLESLGLDHNQLATLPEEI 372



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 189/354 (53%), Gaps = 28/354 (7%)

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           KL  LP +IG + NL  L    N LT+LP  +  LQ L+ L L++N+L  LP  + +L +
Sbjct: 63  KLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQN 122

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           LK+L+L  N++ T+  +I  L NL  L++  N++  LP E+G L+NL  L L+ N L  L
Sbjct: 123 LKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTIL 182

Query: 255 PKEIGNCTMLVTLDL--QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           P+EIG    L  L L  ++     +P  +  L NL  L L +NRL  +P+ + +  +L  
Sbjct: 183 PEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRI 242

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            ++    L+ LP   +  L ++  + LS N+ T  P    TQ  ++  +N E+N+ +  P
Sbjct: 243 LDLYQNRLTILPKE-IGQLKNLLVLDLSGNQLTILPK-EITQLQNLQELNLEYNRFEAFP 300

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I ++ +NL  +++  N LT LP ++G    L +L+L  NQ++ L ++I          
Sbjct: 301 KEI-TQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQLTTLPKEI---------- 349

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
                        G L+KL+ L L+ N+L +LP EI  LK L++L L +N L+S
Sbjct: 350 -------------GRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLLS 390



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 116/201 (57%), Gaps = 5/201 (2%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
            T LP  + +L +L+EL+L  N+L  LP +IG + NL  L L +N LT LP  +  L+ L
Sbjct: 204 FTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNL 263

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            VLDL  N+L  LP  + +L +L+ L L +NR +    +I    NL +L +  N++  LP
Sbjct: 264 LVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTILP 323

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            E+G+L+NL  L L+ N L  LPKEIG    L +L L HN+L  +P+ +  L NL +L L
Sbjct: 324 EEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYL 383

Query: 293 SYN-----RLESVPETLSKCV 308
             N     ++E + + L +C+
Sbjct: 384 HNNPLLSEKIERIRKLLPQCI 404



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 123/249 (49%), Gaps = 25/249 (10%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYV------------ 146
           K +N+  L+L  + +  LP  + +L +L+ELYL  N+L  LP +IG +            
Sbjct: 142 KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKN 201

Query: 147 -------------TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLT 193
                         NL  L L  N LT LP  +  LQ LR+LDL  N+L  LP  + +L 
Sbjct: 202 KPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLK 261

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           +L +L L  N++  +  +I  L NL  L++  N+    P E+ + +NL  LDL  N L  
Sbjct: 262 NLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTI 321

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LP+EIG    L  L L  N+L  +P  +G L  L  L L +N+L ++PE + +  +L + 
Sbjct: 322 LPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKL 381

Query: 314 NVEGCALSS 322
            +    L S
Sbjct: 382 YLHNNPLLS 390



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/146 (44%), Positives = 89/146 (60%), Gaps = 1/146 (0%)

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           + L+E ++N   + +L LS + LK LP  IG L+ L+ L+ E N+L +LP EIG L+ LQ
Sbjct: 42  TNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQ 101

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
            L LQ+NQL +LP  IG L NL  L +  N L ++PEEIG L+NL  L L  N  LN +P
Sbjct: 102 ELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNR-LNILP 160

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEI 561
            E+    NLQ + L    L+ +P EI
Sbjct: 161 KEIGRLQNLQELYLSLNRLTILPEEI 186


>gi|324500178|gb|ADY40092.1| Protein lap1 [Ascaris suum]
          Length = 1428

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 129/390 (33%), Positives = 206/390 (52%), Gaps = 5/390 (1%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F  C  + I  LD  + ++  +P  +++    LEE YL  N +  L   +     L  L 
Sbjct: 8   FFACNRQ-IDVLDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLS 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L+EN +  +P  +ANL  L  L+L+ N +++LP  + + T LKIL L  N I  + P I 
Sbjct: 67  LSENEIIRVPTDIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTIT 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L++++ L + D  + ++P ++G L+NL +L++  N L  +P  I   T L  LDL HNE
Sbjct: 127 LLTSMTHLGLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNE 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L ++P  +G L NL  L +  N LE++PE++ +C  L + +V    L  LPD  +  L  
Sbjct: 187 LDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDD-IGDLEQ 245

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           +N++T+S N     P+        +  +  + N I ++   + S    LS++ + +NLLT
Sbjct: 246 LNDLTVSHNCLQVLPTSV-GHLKKLAILKVDRNAITQLTPAVGS-CTALSELYLTENLLT 303

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            +P  LG    L  LNL  NQ+ ++   I   ++L VL L +NLL++LP  IG L  L+ 
Sbjct: 304 EVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCISLSVLSLRDNLLEQLPLEIGRLENLRV 363

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           LD+  N+L  LP  I  L  LQ L L  +Q
Sbjct: 364 LDVCNNRLNFLPFTINVLFNLQALWLSESQ 393



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 189/345 (54%), Gaps = 5/345 (1%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           ++EK   RC++  +  L LS++ I  +P  +  L  LEEL L GN ++ LP +I   T L
Sbjct: 51  DLEKPLFRCRK--LKTLSLSENEIIRVPTDIANLICLEELNLKGNDVSDLPEEIKECTQL 108

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
             L L+ N +T LP ++  L  +  L L    L ++P+ +  L +L+ L +R N ++T+ 
Sbjct: 109 KILDLSSNPITRLPPTITLLTSMTHLGLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIP 168

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
           P I  L+ L  L +  N++ +LP E+G L NL  L +  N LE LP+ I  C  L  LD+
Sbjct: 169 PSISQLTQLQRLDLGHNELDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQLDV 228

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
             N+L+ +PD +G+L  L  L +S+N L+ +P ++     L    V+  A++ L    + 
Sbjct: 229 SENKLMVLPDDIGDLEQLNDLTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQLTPA-VG 287

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
           S T+++ + L+ N  T  P+       ++ ++N + NQ+ +IP  I     +LS ++++D
Sbjct: 288 SCTALSELYLTENLLTEVPTSL-GNLKALRTLNLDKNQLKEIPSTIGG-CISLSVLSLRD 345

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           NLL  LPL++G    L  L++  N+++ L   I  L NL+ L LS
Sbjct: 346 NLLEQLPLEIGRLENLRVLDVCNNRLNFLPFTINVLFNLQALWLS 390



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 193/397 (48%), Gaps = 32/397 (8%)

Query: 170 QQLRVLDLRHNKLNELPMVVYK-LTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+ VLD R   L  +P  + +   +L+  YL  N IK +   +     L  LS+ +N+I
Sbjct: 13  RQIDVLDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             +P ++  L  L  L+L  N + +LP+EI  CT L  LDL  N +  +P  +  L ++T
Sbjct: 73  IRVPTDIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L  +P  +    +L    V    L ++P  +                     
Sbjct: 133 HLGLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSI--------------------- 171

Query: 349 SGGPTQFTSVYSINFEHNQIDKIP--YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
               +Q T +  ++  HN++D +P   G+ S   NL ++ +  N L +LP  +     L 
Sbjct: 172 ----SQLTQLQRLDLGHNELDDLPSEIGLLS---NLQELYVDQNDLEALPESIVQCRSLQ 224

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
           +L++  N++  L +DI +L  L  L +S+N L+ LP+S+G+L+KL  L ++ N +  L  
Sbjct: 225 QLDVSENKLMVLPDDIGDLEQLNDLTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQLTP 284

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            +G    L  L L  N L  +P ++G+L  L  L++ +N L+ IP  IG   +L  L L 
Sbjct: 285 AVGSCTALSELYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCISLSVLSLR 344

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVV 563
           DN  L  +P E+    NL+++ + N  L+ +P  I V
Sbjct: 345 DN-LLEQLPLEIGRLENLRVLDVCNNRLNFLPFTINV 380



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 176/351 (50%), Gaps = 34/351 (9%)

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAH---NHLEELPKEIGNCTMLVTLDLQHNEL 274
           + +L  R   ++ +P ++   +N  TL+ A+   NH+++L K +  C  L TL L  NE+
Sbjct: 15  IDVLDRRQCNLQSVPNDID--RNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEI 72

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           + +P  + NLI L  L L  N +  +PE + +C  L   ++    ++ LP   ++ LTS+
Sbjct: 73  IRVPTDIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPP-TITLLTSM 131

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ L+    T  P            ++  H              +NL  + +++NLL +
Sbjct: 132 THLGLNDISLTQMP------------LDIGH-------------LRNLRSLEVRENLLRT 166

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           +P  +     L  L+LG N++  L  +I  L NL+ L +  N L+ LP SI   R L+ L
Sbjct: 167 IPPSISQLTQLQRLDLGHNELDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQL 226

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           D+ ENKL  LP++IG L++L  L +  N L  LP ++GHL  L+ L V  N +  +   +
Sbjct: 227 DVSENKLMVLPDDIGDLEQLNDLTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQLTPAV 286

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGG 565
           G+   L  LYL +N  L  +P  L     L+ ++LD   L +IPS I  GG
Sbjct: 287 GSCTALSELYLTEN-LLTEVPTSLGNLKALRTLNLDKNQLKEIPSTI--GG 334



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 108/218 (49%), Gaps = 23/218 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL  + +  LP  +  L++L+ELY+  N L +LP  I    +L  L ++EN L  LPD 
Sbjct: 180 LDLGHNELDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDD 239

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + +L+QL  L + HN L  LP  V  L  L IL +  N I  + P +   + LS L + +
Sbjct: 240 IGDLEQLNDLTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTE 299

Query: 226 NKIRELPPELGELKNLVTLDLAHNHL-----------------------EELPKEIGNCT 262
           N + E+P  LG LK L TL+L  N L                       E+LP EIG   
Sbjct: 300 NLLTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCISLSVLSLRDNLLEQLPLEIGRLE 359

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESV 300
            L  LD+ +N L  +P  +  L NL  L LS ++ +++
Sbjct: 360 NLRVLDVCNNRLNFLPFTINVLFNLQALWLSESQSQAM 397


>gi|260788686|ref|XP_002589380.1| hypothetical protein BRAFLDRAFT_77822 [Branchiostoma floridae]
 gi|229274557|gb|EEN45391.1| hypothetical protein BRAFLDRAFT_77822 [Branchiostoma floridae]
          Length = 670

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 138/501 (27%), Positives = 241/501 (48%), Gaps = 53/501 (10%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           +L LDLS   +T +P  V  +T LE L +  NKL S+P  IG + NL+ L    N +TSL
Sbjct: 15  LLTLDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAIGRLQNLSRLDADGNMMTSL 74

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P ++++LQ L+ L +  N L+ELP                         ++ L NL  L 
Sbjct: 75  PQAISSLQGLKQLYVHSNNLSELP-----------------------DGLEDLQNLEWLW 111

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           ++DNK+++LP ++    NLV  D ++N+L   P  +     L  L +  N+L  +P  + 
Sbjct: 112 VKDNKLKKLPTKIFSCLNLVNFDASNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVC 171

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
           +L NL +L +  N L + P  + K   L E  + G  L+ +P G + SL ++  +++  N
Sbjct: 172 SLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSG-VCSLPNLEKLSVYNN 230

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
             + +P  G  +   +  +    NQ+ ++P G+ S   NL K+++ +N L++ P  +   
Sbjct: 231 NLSTFPP-GVEKLQKLRELYIHDNQLTEVPSGVCS-LPNLEKLSVYNNNLSTFPPGVEKL 288

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE---- 458
             L EL +  NQ++++   + +L NLEVL + NN ++ LP  +  L ++K L +      
Sbjct: 289 QKLRELYIHHNQLTEVPSGVCSLPNLEVLSVGNNPIRCLPDEVTRLTRMKTLSVPSCQFD 348

Query: 459 ----------------------NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
                                  K + +P+E+G L+ L  L L++N L +LP  + HL N
Sbjct: 349 EFPRQVLQLKTLEMLYAGQNGGRKFDMVPDEVGNLQHLWFLALENNLLRTLPSTMSHLHN 408

Query: 497 LSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ 556
           L  + +  N   + PE +  L  +  L + +N  +  IP  L     L+ + +   PL+ 
Sbjct: 409 LRQVQLWNNKFDTFPEVLCELPAMEKLDIKNNN-ITRIPTALHRADKLRDLDVSGNPLTY 467

Query: 557 IPSEIVVGGPSLIIRYLKMQG 577
            P ++   G   I+ +LK + 
Sbjct: 468 PPQDVCKQGTGAIMAFLKQEA 488



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 182/367 (49%), Gaps = 23/367 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N++N D S ++++  PP VEKL  L ELY+YGN+L  +PS +  + NL  L +  N+L++
Sbjct: 129 NLVNFDASNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLST 188

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
            P  +  LQ+LR L +  N+L E+P  V  L +L+ L +  N + T  P ++ L  L  L
Sbjct: 189 FPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLREL 248

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + DN++ E+P  +  L NL  L + +N+L   P  +     L  L + HN+L  +P  +
Sbjct: 249 YIHDNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYIHHNQLTEVPSGV 308

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
            +L NL  L +  N +  +P+ +++   +   +V  C     P  +L  L ++  +   +
Sbjct: 309 CSLPNLEVLSVGNNPIRCLPDEVTRLTRMKTLSVPSCQFDEFPRQVL-QLKTLEMLYAGQ 367

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N       GG               + D +P  +    ++L  + +++NLL +LP  +  
Sbjct: 368 N-------GG--------------RKFDMVPDEV-GNLQHLWFLALENNLLRTLPSTMSH 405

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L ++ L  N+     E +  L  +E L + NN + ++P+++    KL+ LD+  N L
Sbjct: 406 LHNLRQVQLWNNKFDTFPEVLCELPAMEKLDIKNNNITRIPTALHRADKLRDLDVSGNPL 465

Query: 462 ESLPNEI 468
              P ++
Sbjct: 466 TYPPQDV 472



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 87/158 (55%), Gaps = 1/158 (0%)

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           GL  L+L    ++ + E++ ++ +LE L +SNN L  +P +IG L+ L  LD + N + S
Sbjct: 14  GLLTLDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAIGRLQNLSRLDADGNMMTS 73

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           LP  I  L+ L++L + SN L  LP  +  L NL +L V +N L+ +P +I +  NL   
Sbjct: 74  LPQAISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCLNLVNF 133

Query: 524 YLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             ++N  L+  P  +     L+ + +    L+++PS +
Sbjct: 134 DASNNN-LSTFPPGVEKLQKLRELYIYGNQLTEVPSGV 170


>gi|440797010|gb|ELR18105.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 950

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 158/523 (30%), Positives = 239/523 (45%), Gaps = 52/523 (9%)

Query: 98  CKEENILNLDLSKSSITHLPPSV-EKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE 156
           C   N+  L++  +++  LP  + E +  LEEL  + N+L  LP ++G+  +L  L    
Sbjct: 91  CHLRNLTKLEVGNNALVALPEGMFEAMPLLEELSCFMNQLQRLPREVGWARSLKRLVAYV 150

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N L  LP+ L     L  LD+  N L  LP ++  L+SL+ L +  NR+  + P +  L 
Sbjct: 151 NQLQRLPEELGLCADLVELDVATNHLTALPAMLAHLSSLRRLNVSSNRLVHLGPQLGDLP 210

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE------------------- 257
           +L  L +R N++  LP ELG L  L +L L HN L  LP                     
Sbjct: 211 DLERLDLRFNRLLRLPDELGRLAQLNSLLLDHNDLASLPAALSTLSTLKLLSINENRLAH 270

Query: 258 ----------------------------IGNCTMLVTLDLQHNELVNIPDMLGNLINLTR 289
                                       +   T L TLDL HN L  +P  LG L  LT 
Sbjct: 271 LPPDALALPALAELSLRANRLTALPPEPLAALTALQTLDLAHNLLPFLPPALGTLPRLTN 330

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS 349
           L L  N L  +P  L     L E  ++  AL  LP   L  +  + ++ +  N+ TA P 
Sbjct: 331 LFLGANLLTLLPTELCGLSQLAELELQDNALEELP-AELGQMEKLAHLDVRNNQLTALPP 389

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
               Q   +  ++   N I  +P  +++   +L+++++  N ++ LP D      L  L 
Sbjct: 390 S-IGQLVKLRLLDAGMNLISDLPPELYA-VSSLARLSLSGNRISDLPEDFCRLTRLERLL 447

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           LG NQ+S L   +  L +L VL LS N L  LP  + +L  LK L +  N L  LP E+G
Sbjct: 448 LGYNQLSTLPAGLNQLTHLTVLSLSGNRLTTLPPVVFDLTWLKELYVAANGLTELPTEVG 507

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            L  L+ L L SN L +LP  +G    L+ L    N L S+P  +G L +L  + L+ N 
Sbjct: 508 RLTTLEILDLTSNHLTALPEELGCCVRLTELEASHNRLASVPASLGNLVSLVEIDLSANE 567

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRY 572
            L  +P ELA  + L+ + L +C L ++P E+    P   +R+
Sbjct: 568 -LTTLPPELARLTALRHLKLCHCRLQRLPRELAALVPPPDLRF 609



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 212/490 (43%), Gaps = 98/490 (20%)

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L+ L+ L  L+  +N+ + LP  + KL  L+ L L  N +  +  +I +L NL+ L + +
Sbjct: 44  LSCLKSLTFLNANYNRFDRLPPNIAKLAKLQRLMLVKNNLTMLPVEICHLRNLTKLEVGN 103

Query: 226 -----------------------------------------------NKIRELPPELGEL 238
                                                          N+++ LP ELG  
Sbjct: 104 NALVALPEGMFEAMPLLEELSCFMNQLQRLPREVGWARSLKRLVAYVNQLQRLPEELGLC 163

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
            +LV LD+A NHL  LP  + + + L  L++  N LV++   LG+L +L RL L +NRL 
Sbjct: 164 ADLVELDVATNHLTALPAMLAHLSSLRRLNVSSNRLVHLGPQLGDLPDLERLDLRFNRLL 223

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDG----LLSSLTSINNITLSR------------- 341
            +P+ L +   LN   ++   L+SLP          L SIN   L+              
Sbjct: 224 RLPDELGRLAQLNSLLLDHNDLASLPAALSTLSTLKLLSINENRLAHLPPDALALPALAE 283

Query: 342 -----NKFTAYPSGGPTQFTSVYSINFEHNQIDKIP--YGIFSRAKNLSKVNMKDNLLTS 394
                N+ TA P       T++ +++  HN +  +P   G   R  NL    +  NLLT 
Sbjct: 284 LSLRANRLTALPPEPLAALTALQTLDLAHNLLPFLPPALGTLPRLTNLF---LGANLLTL 340

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP +L     L EL L  N + +L  ++  +  L  L + NN L  LP SIG L KL+ L
Sbjct: 341 LPTELCGLSQLAELELQDNALEELPAELGQMEKLAHLDVRNNQLTALPPSIGQLVKLRLL 400

Query: 455 DLEENKLESLPNEIGFLKELQRLILQS-----------------------NQLVSLPRAI 491
           D   N +  LP E+  +  L RL L                         NQL +LP  +
Sbjct: 401 DAGMNLISDLPPELYAVSSLARLSLSGNRISDLPEDFCRLTRLERLLLGYNQLSTLPAGL 460

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
             LT+L+ LS+  N L ++P  +  L  L  LY+  N  L  +P E+   + L+I+ L +
Sbjct: 461 NQLTHLTVLSLSGNRLTTLPPVVFDLTWLKELYVAANG-LTELPTEVGRLTTLEILDLTS 519

Query: 552 CPLSQIPSEI 561
             L+ +P E+
Sbjct: 520 NHLTALPEEL 529



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/247 (35%), Positives = 136/247 (55%), Gaps = 1/247 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E + +LD+  + +T LPPS+ +L  L  L    N ++ LP ++  V++L  L L+ N ++
Sbjct: 372 EKLAHLDVRNNQLTALPPSIGQLVKLRLLDAGMNLISDLPPELYAVSSLARLSLSGNRIS 431

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP+    L +L  L L +N+L+ LP  + +LT L +L L  NR+ T+ P +  L+ L  
Sbjct: 432 DLPEDFCRLTRLERLLLGYNQLSTLPAGLNQLTHLTVLSLSGNRLTTLPPVVFDLTWLKE 491

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N + ELP E+G L  L  LDL  NHL  LP+E+G C  L  L+  HN L ++P  
Sbjct: 492 LYVAANGLTELPTEVGRLTTLEILDLTSNHLTALPEELGCCVRLTELEASHNRLASVPAS 551

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           LGNL++L  + LS N L ++P  L++   L    +  C L  LP   L++L    ++  +
Sbjct: 552 LGNLVSLVEIDLSANELTTLPPELARLTALRHLKLCHCRLQRLPRE-LAALVPPPDLRFT 610

Query: 341 RNKFTAY 347
            N   AY
Sbjct: 611 TNSNDAY 617



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 196/417 (47%), Gaps = 36/417 (8%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYL---RFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
           LD+   +L    +   KL+ LK L      +NR   + P+I  L+ L  L +  N +  L
Sbjct: 27  LDISSRQLTNAQIAHLKLSCLKSLTFLNANYNRFDRLPPNIAKLAKLQRLMLVKNNLTML 86

Query: 232 PPELGELKNLVTLDLAHNHLEELPKEIGNCT-MLVTLDLQHNELVNIPDMLGNLINLTRL 290
           P E+  L+NL  L++ +N L  LP+ +     +L  L    N+L  +P  +G   +L RL
Sbjct: 87  PVEICHLRNLTKLEVGNNALVALPEGMFEAMPLLEELSCFMNQLQRLPREVGWARSLKRL 146

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
               N+L+ +PE L  C  L E +V    L++LP  +L+ L+S+  + +S N+       
Sbjct: 147 VAYVNQLQRLPEELGLCADLVELDVATNHLTALP-AMLAHLSSLRRLNVSSNRLVHL--- 202

Query: 351 GPT--QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
           GP       +  ++   N++ ++P  +  R   L+ + +  N L SLP  L T   L  L
Sbjct: 203 GPQLGDLPDLERLDLRFNRLLRLPDEL-GRLAQLNSLLLDHNDLASLPAALSTLSTLKLL 261

Query: 409 NLGTNQISKLS------------------------EDIQNLVNLEVLVLSNNLLKKLPSS 444
           ++  N+++ L                         E +  L  L+ L L++NLL  LP +
Sbjct: 262 SINENRLAHLPPDALALPALAELSLRANRLTALPPEPLAALTALQTLDLAHNLLPFLPPA 321

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
           +G L +L  L L  N L  LP E+  L +L  L LQ N L  LP  +G +  L++L V  
Sbjct: 322 LGTLPRLTNLFLGANLLTLLPTELCGLSQLAELELQDNALEELPAELGQMEKLAHLDVRN 381

Query: 505 NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N L ++P  IG L  L  L    N  ++++P EL   S+L  +SL    +S +P + 
Sbjct: 382 NQLTALPPSIGQLVKLRLLDAGMN-LISDLPPELYAVSSLARLSLSGNRISDLPEDF 437


>gi|297681099|ref|XP_002818262.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Pongo abelii]
          Length = 861

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 145/505 (28%), Positives = 245/505 (48%), Gaps = 53/505 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++S + I+H+P  + +L ++ +L+ Y N + + PS +  + NL  L L +N L  +PD+
Sbjct: 217 LNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDT 276

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L +L+ LRVL+L +N+L   P  +  L  L  L L  N I ++  +I+ L NL  L +  
Sbjct: 277 LPSLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIKELKNLETLLLDH 336

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLE-----------------------ELPKEIGNCT 262
           NK+  L  E+ +L  +  L LA N LE                        +P++I  C 
Sbjct: 337 NKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKSIPEKISCCA 396

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           ML  L L  N+L  +P  +  L NL +L ++ N +  + +++S   ++      G  ++ 
Sbjct: 397 MLECLSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVKITDSISHLNNICSLEFSGNIITG 456

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P   + +   I  I LS NK   +P  G     S+Y ++   N I +IP  I S +K L
Sbjct: 457 VPIE-IKNCQKIIKIELSYNKIMYFPL-GLCALDSLYYLSVSGNCISEIPVDI-SFSKQL 513

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + + +N L        + + L  L+LG NQI K+   I N+++L VL+L  N  +  P
Sbjct: 514 LHLELSENKLLIFSEHFCSLINLQYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFP 573

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV----------------- 485
             +  L  L+ LDL EN+L+ + ++I  LK +Q+L   SNQ +                 
Sbjct: 574 RELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNI 633

Query: 486 ---------SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
                     LP  + ++T L  L +  N ++ IP  IG L NL +L+  +N  ++ +P 
Sbjct: 634 SQIKGRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQ-ISYLPP 692

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEI 561
            L   ++LQ ++L    L+ +PS I
Sbjct: 693 SLLSLNDLQQLNLSGNNLTALPSAI 717



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 186/391 (47%), Gaps = 32/391 (8%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH-PDIQYLSNLSMLSMRDNKIRELP 232
            ++L    L E P  + K+  +K LYL  N+IKT    D   L  L +LS+++N +  LP
Sbjct: 146 TVNLEAKGLQEFPRDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSLP 205

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            E+  L NL  L+++HNH+  +PKEI     +  L   +N + N P  L  L NL  L L
Sbjct: 206 SEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSL 265

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
             N+L  +P+TL    +L   N+E   L+  P  L                         
Sbjct: 266 GKNKLRHIPDTLPSLKNLRVLNLEYNQLTIFPKALCF----------------------- 302

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                + S++   N I  +P  I    KNL  + +  N LT L +++   + + EL L  
Sbjct: 303 --LPKLISLDLTGNLISSLPKEI-KELKNLETLLLDHNKLTFLAVEIFQLLKIKELQLAD 359

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N++  +S  I+N   L +L+L  NLLK +P  I     L+CL L +NKL  LP  I  LK
Sbjct: 360 NKLEVISHKIENFRELRILILDKNLLKSIPEKISCCAMLECLSLSDNKLTELPKNIHKLK 419

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            L++L +  N +V +  +I HL N+  L    N +  +P EI   + +  + L+ N  + 
Sbjct: 420 NLRKLHVNRNNMVKITDSISHLNNICSLEFSGNIITGVPIEIKNCQKIIKIELSYNKIM- 478

Query: 533 NIPFELALCS--NLQIMSLDNCPLSQIPSEI 561
              F L LC+  +L  +S+    +S+IP +I
Sbjct: 479 --YFPLGLCALDSLYYLSVSGNCISEIPVDI 507



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 226/451 (50%), Gaps = 27/451 (5%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C    +++LDL+ + I+ LP  +++L +LE L L  NKL  L  +I  +  +  L LA+N
Sbjct: 301 CFLPKLISLDLTGNLISSLPKEIKELKNLETLLLDHNKLTFLAVEIFQLLKIKELQLADN 360

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L  +   + N ++LR+L L  N L  +P  +     L+ L L  N++  +  +I  L N
Sbjct: 361 KLEVISHKIENFRELRILILDKNLLKSIPEKISCCAMLECLSLSDNKLTELPKNIHKLKN 420

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N + ++   +  L N+ +L+ + N +  +P EI NC  ++ ++L +N+++  
Sbjct: 421 LRKLHVNRNNMVKITDSISHLNNICSLEFSGNIITGVPIEIKNCQKIIKIELSYNKIMYF 480

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLS---KCVHLN-------EFNVEGCALSSLP--- 324
           P  L  L +L  L +S N +  +P  +S   + +HL         F+   C+L +L    
Sbjct: 481 PLGLCALDSLYYLSVSGNCISEIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLQYLD 540

Query: 325 ---------DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
                       +S++ S++ + L  NKF  +P    T   ++  ++   NQ+ KI   I
Sbjct: 541 LGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCT-LENLQVLDLSENQLQKISSDI 599

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT---NQISKLSEDIQNLVNLEVLV 432
               K + K+N   N     P++L     L +LN+      ++++L  ++ N+  L+ L 
Sbjct: 600 -CNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELD 658

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           +SNN ++++P +IG LR L  L    N++  LP  +  L +LQ+L L  N L +LP AI 
Sbjct: 659 ISNNAIREIPRNIGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSAIY 718

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           +L +L  ++  +N L   P EI   + L+T+
Sbjct: 719 NLFSLKEINFDDNPLLRPPMEICKGKQLYTI 749



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 217/454 (47%), Gaps = 29/454 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + +T  P ++  L  L  L L GN ++SLP +I  + NL  L L  N LT
Sbjct: 281 KNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIKELKNLETLLLDHNKLT 340

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L   +  L +++ L L  NKL  +   +     L+IL L  N +K++   I   + L  
Sbjct: 341 FLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKSIPEKISCCAMLEC 400

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+ DNK+ ELP  + +LKNL  L +  N++ ++   I +   + +L+   N +  +P  
Sbjct: 401 LSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVKITDSISHLNNICSLEFSGNIITGVPIE 460

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           + N   + ++ LSYN++   P  L     L   +V G  +S +P  +  S   + ++ LS
Sbjct: 461 IKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLSVSGNCISEIPVDISFS-KQLLHLELS 519

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            NK   + S       ++  ++   NQI KIP  I S   +L  + +  N   + P +L 
Sbjct: 520 ENKLLIF-SEHFCSLINLQYLDLGKNQIKKIPASI-SNMISLHVLILCCNKFETFPRELC 577

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL----------------------- 437
           T   L  L+L  NQ+ K+S DI NL  ++ L  S+N                        
Sbjct: 578 TLENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIK 637

Query: 438 ---LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
              L +LP  + N+ +LK LD+  N +  +P  IG L+ L  L   +NQ+  LP ++  L
Sbjct: 638 GRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQISYLPPSLLSL 697

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            +L  L++  NNL ++P  I  L +L  +  +DN
Sbjct: 698 NDLQQLNLSGNNLTALPSAIYNLFSLKEINFDDN 731


>gi|397476828|ref|XP_003809793.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Pan paniscus]
          Length = 860

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 145/505 (28%), Positives = 245/505 (48%), Gaps = 53/505 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++S + I+H+P  + +L ++ +L+ Y N + + P+ +  + NL  L L +N L  +PD+
Sbjct: 216 LNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPTDLECLGNLEILSLGKNKLRHIPDT 275

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L +L+ LRVL+L +N+L   P  +  L  L  L L  N I ++  +I+ L NL  L M  
Sbjct: 276 LPSLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLMDH 335

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLE-----------------------ELPKEIGNCT 262
           NK+  L  E+ +L  +  L LA N LE                        +P++I  C 
Sbjct: 336 NKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKISCCA 395

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           ML  L L  N+L  +P  +  L NL +L ++ N +  + +++S   ++      G  ++ 
Sbjct: 396 MLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKITDSISHLNNICSLEFSGNIITD 455

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P   + +   I  I LS N    +P  G     S+Y ++   N I +IP  I S +K L
Sbjct: 456 VPIE-IKNCQKIIKIELSYNNIMYFPL-GLCALDSLYYLSVNGNYISEIPVDI-SFSKQL 512

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + + +N L        + + L  L+LG NQI K+   I N+++L VL+L  N  +  P
Sbjct: 513 LHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFP 572

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV----------------- 485
             +  L  L+ LDL EN+L+ + ++I  LK +Q+L L SNQ +                 
Sbjct: 573 RELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNLSSNQFIHFPIELCQLQSLEQLNI 632

Query: 486 ---------SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
                     LP  + ++T L  L +  N ++ IP  IG L NL +L+  +N  ++ +P 
Sbjct: 633 SQIKGRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQ-ISYLPP 691

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEI 561
            L   ++LQ ++L    L+ +PS I
Sbjct: 692 SLLSLNDLQQLNLSGNNLTALPSAI 716



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 194/413 (46%), Gaps = 46/413 (11%)

Query: 152 LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH-P 210
           LGL E++ T              ++L    L E P  + K+  +K LYL  N+IKT    
Sbjct: 137 LGLGEDNFT--------------VNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGA 182

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L  L +LS+++N +  LP E+  L NL  L+++HNH+  +PKEI     +  L   
Sbjct: 183 DSGDLLGLEILSLQENGLSSLPSEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFY 242

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           +N + N P  L  L NL  L L  N+L  +P+TL    +L   N+E   L+  P  L   
Sbjct: 243 NNYIENFPTDLECLGNLEILSLGKNKLRHIPDTLPSLKNLRVLNLEYNQLTIFPKALCF- 301

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
                                      + S++   N I  +P  I    KNL  + M  N
Sbjct: 302 ------------------------LPKLISLDLTGNLISSLPKEI-RELKNLETLLMDHN 336

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            LT L +++   + + EL L  N++  +S  I+N   L +L+L  NLLK +P  I     
Sbjct: 337 KLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKISCCAM 396

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L+CL L +NKL  LP  I  L  L++L +  N +V +  +I HL N+  L    N +  +
Sbjct: 397 LECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKITDSISHLNNICSLEFSGNIITDV 456

Query: 511 PEEIGTLENLHTLYLNDNTCLNNIPFELALCS--NLQIMSLDNCPLSQIPSEI 561
           P EI   + +  + L+ N   N + F L LC+  +L  +S++   +S+IP +I
Sbjct: 457 PIEIKNCQKIIKIELSYN---NIMYFPLGLCALDSLYYLSVNGNYISEIPVDI 506



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 224/454 (49%), Gaps = 33/454 (7%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C    +++LDL+ + I+ LP  + +L +LE L +  NKL  L  +I  +  +  L LA+N
Sbjct: 300 CFLPKLISLDLTGNLISSLPKEIRELKNLETLLMDHNKLTFLAVEIFQLLKIKELQLADN 359

Query: 158 SLTSLPDSLANLQQLRVL-----------------------DLRHNKLNELPMVVYKLTS 194
            L  +   + N ++LR+L                        L  NKL ELP  ++KL +
Sbjct: 360 KLEVISHKIENFRELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNN 419

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L+ L++  N +  +   I +L+N+  L    N I ++P E+   + ++ ++L++N++   
Sbjct: 420 LRKLHVNRNNMVKITDSISHLNNICSLEFSGNIITDVPIEIKNCQKIIKIELSYNNIMYF 479

Query: 255 PKEIGNCTM--LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           P  +G C +  L  L +  N +  IP  +     L  L LS N+L    E     ++L  
Sbjct: 480 P--LGLCALDSLYYLSVNGNYISEIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKY 537

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            ++    +  +P  + S++ S++ + L  NKF  +P    T   ++  ++   NQ+ KI 
Sbjct: 538 LDLGKNQIKKIPASI-SNMISLHVLILCCNKFETFPRELCT-LENLQVLDLSENQLQKIS 595

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT---NQISKLSEDIQNLVNLE 429
             I    K + K+N+  N     P++L     L +LN+      ++++L  ++ N+  L+
Sbjct: 596 SDI-CNLKGIQKLNLSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLK 654

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR 489
            L +SNN ++++P +IG LR L  L    N++  LP  +  L +LQ+L L  N L +LP 
Sbjct: 655 ELDISNNAIREIPRNIGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNLTALPS 714

Query: 490 AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           AI +L +L  ++  +N L   P EI   + L+T+
Sbjct: 715 AIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTI 748


>gi|75076353|sp|Q4R6F0.1|LRRD1_MACFA RecName: Full=Leucine-rich repeat and death domain-containing
           protein 1
 gi|67969956|dbj|BAE01325.1| unnamed protein product [Macaca fascicularis]
          Length = 863

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 145/505 (28%), Positives = 245/505 (48%), Gaps = 53/505 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++S + I+H+P  + +L ++ +L+ Y N + + PS +  + NL  L L +N L  +PD+
Sbjct: 219 LNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDT 278

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L +L+ LRVL+L +N+L   P  +  L  L  L L  N I ++  +I+ L NL  L +  
Sbjct: 279 LPSLKYLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLLDH 338

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLE-----------------------ELPKEIGNCT 262
           NK+  L  E+ +L  +  L LA N LE                        +P++I  C 
Sbjct: 339 NKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKICCCA 398

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           ML  L L  N+L  +P  +  L NL +L ++ N +  + +++S   ++      G  ++ 
Sbjct: 399 MLECLTLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSISHLNNICSLEFSGNIIAG 458

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P   + +   I  I L+ NK   +P  G     S+Y ++   N I +IP  I S +K L
Sbjct: 459 IPIE-IKNCQKIIKIELNYNKIMYFPL-GLCALDSLYYLSVNGNYISEIPADI-SFSKQL 515

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + + +N L        + + L  L+LG NQI K+   I N+++L VL+L  N  +  P
Sbjct: 516 LHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFP 575

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV----------------- 485
             +  L  L+ LDL EN+L+ + ++I  LK +Q+L   SNQ +                 
Sbjct: 576 RELCTLENLRVLDLSENQLQKISSDICNLKRIQKLNFSSNQFIHFPIELCQLQSLEQLNI 635

Query: 486 ---------SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
                     LP  + ++T L  L +  N ++ IP  IG L NL +L+  +N  ++ IP 
Sbjct: 636 SQIKGRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQ-ISYIPP 694

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEI 561
            L   ++LQ ++L    L+ +PS I
Sbjct: 695 SLLSLNDLQQLNLSGNNLTALPSAI 719



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 226/451 (50%), Gaps = 27/451 (5%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C    +++LDL+ + I+ LP  + +L +LE L L  NKL  L  +I  +  +  L LA+N
Sbjct: 303 CFLPKLISLDLTGNLISSLPKEIRELKNLETLLLDHNKLTFLAVEIFQLLKIKELQLADN 362

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L  +   + N ++LR+L L  N L  +P  +     L+ L L  N++  +  +I  L+N
Sbjct: 363 KLEVISHKIENFRELRILILDKNLLKNIPEKICCCAMLECLTLSDNKLTELPKNIHKLNN 422

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N + ++   +  L N+ +L+ + N +  +P EI NC  ++ ++L +N+++  
Sbjct: 423 LRKLHVNRNNMVKITDSISHLNNICSLEFSGNIIAGIPIEIKNCQKIIKIELNYNKIMYF 482

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLS---KCVHLN-------EFNVEGCALSSLP--- 324
           P  L  L +L  L ++ N +  +P  +S   + +HL         F+   C+L +L    
Sbjct: 483 PLGLCALDSLYYLSVNGNYISEIPADISFSKQLLHLELSENKLLIFSEHFCSLINLKYLD 542

Query: 325 ---------DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
                       +S++ S++ + L  NKF  +P    T   ++  ++   NQ+ KI   I
Sbjct: 543 LGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCT-LENLRVLDLSENQLQKISSDI 601

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT---NQISKLSEDIQNLVNLEVLV 432
               K + K+N   N     P++L     L +LN+      ++++L  ++ N+  L+ L 
Sbjct: 602 -CNLKRIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELD 660

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           +SNN ++++P +IG LR L  L    N++  +P  +  L +LQ+L L  N L +LP AI 
Sbjct: 661 ISNNAIREIPRNIGELRNLVSLHAYNNQISYIPPSLLSLNDLQQLNLSGNNLTALPSAIY 720

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           +L +L  ++  +N L   P EI   + L+T+
Sbjct: 721 NLFSLKEINFDDNPLLRPPMEICKGKQLYTI 751


>gi|402864263|ref|XP_003896392.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Papio anubis]
          Length = 863

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 145/505 (28%), Positives = 246/505 (48%), Gaps = 53/505 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++S + I+H+P  + +L ++ +L+ Y N + + PS +  + NL  L L +N L  +PD+
Sbjct: 219 LNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDT 278

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L +L+ LRVL+L++N+L   P  +  L  L  L L  N I ++  +I+ L NL  L +  
Sbjct: 279 LPSLKYLRVLNLQYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLLDH 338

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLE-----------------------ELPKEIGNCT 262
           NK+  L  E+ +L  +  L LA N LE                        +P++I  C 
Sbjct: 339 NKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILMLDKNLLKNIPEKICCCA 398

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           ML  L L  N+L  +P  +  L NL +L ++ N +  + +++S   ++      G  ++ 
Sbjct: 399 MLECLTLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSISHLNNICSLEFSGNIIAG 458

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P   + +   I  I L+ NK   +P  G     S+Y ++   N I +IP  I S +K L
Sbjct: 459 VPIE-IKNCQKIIKIELNYNKIMYFPL-GLCALDSLYYLSVNGNYISEIPADI-SFSKQL 515

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + + +N L        + + L  L+LG NQI K+   I N+++L VL+L  N  +  P
Sbjct: 516 LHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFP 575

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV----------------- 485
             +  L  L+ LDL EN+L+ + ++I  LK +Q+L   SNQ +                 
Sbjct: 576 RELCTLENLRVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNI 635

Query: 486 ---------SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
                     LP  + ++T L  L +  N ++ IP  IG L NL +L+  +N  ++ IP 
Sbjct: 636 SQIKGRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQ-ISYIPP 694

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEI 561
            L   ++LQ ++L    L+ +PS I
Sbjct: 695 SLLSLNDLQQLNLSGNNLTTLPSAI 719



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 225/451 (49%), Gaps = 27/451 (5%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C    +++LDL+ + I+ LP  + +L +LE L L  NKL  L  +I  +  +  L LA+N
Sbjct: 303 CFLPKLISLDLTGNLISSLPKEIRELKNLETLLLDHNKLTFLAVEIFQLLKIKELQLADN 362

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L  +   + N ++LR+L L  N L  +P  +     L+ L L  N++  +  +I  L+N
Sbjct: 363 KLEVISHKIENFRELRILMLDKNLLKNIPEKICCCAMLECLTLSDNKLTELPKNIHKLNN 422

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N + ++   +  L N+ +L+ + N +  +P EI NC  ++ ++L +N+++  
Sbjct: 423 LRKLHVNRNNMVKITDSISHLNNICSLEFSGNIIAGVPIEIKNCQKIIKIELNYNKIMYF 482

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLS---KCVHLN-------EFNVEGCALSSLP--- 324
           P  L  L +L  L ++ N +  +P  +S   + +HL         F+   C+L +L    
Sbjct: 483 PLGLCALDSLYYLSVNGNYISEIPADISFSKQLLHLELSENKLLIFSEHFCSLINLKYLD 542

Query: 325 ---------DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
                       +S++ S++ + L  NKF  +P    T   ++  ++   NQ+ KI   I
Sbjct: 543 LGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCT-LENLRVLDLSENQLQKISSDI 601

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT---NQISKLSEDIQNLVNLEVLV 432
               K + K+N   N     P++L     L +LN+      ++++L  ++ N+  L+ L 
Sbjct: 602 -CNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELD 660

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           +SNN ++++P +IG LR L  L    N++  +P  +  L +LQ+L L  N L +LP AI 
Sbjct: 661 ISNNAIREIPRNIGELRNLVSLHAYNNQISYIPPSLLSLNDLQQLNLSGNNLTTLPSAIY 720

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           +L +L  ++   N L   P EI   + L+T+
Sbjct: 721 NLFSLKEINFDHNPLLRPPMEICKGKQLYTI 751


>gi|312080118|ref|XP_003142464.1| PDZ-domain-containing protein scribble [Loa loa]
          Length = 1215

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 220/436 (50%), Gaps = 27/436 (6%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F  C  + +  LD  + ++  +P  +++    LEE+YL  N +  L   +     L  L 
Sbjct: 8   FFACNRQ-VDMLDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILS 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L+EN +  LP  +A+L  L  L+L+ N +++LP  +     LKIL L  N I  + P I 
Sbjct: 67  LSENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPPTIS 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L++++ L + D  + ++P ++G+L+NL +L++  N L  +P  I     L  LDL HNE
Sbjct: 127 QLTSMTSLGLNDISLTQMPHDIGQLRNLRSLEVRENLLRTVPPSISQLKQLRRLDLGHNE 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L ++P+ +  L NL  L +  N LE++PE++ +C  L + +V    L  LPD  +  L  
Sbjct: 187 LDDLPNEISMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMLLPDE-IGDLEK 245

Query: 334 INNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
           ++++T+S+N     PS  G     S+  +      I  + + I  R K LS +    N +
Sbjct: 246 LDDLTVSQNCLQVLPSSIGNNHLRSLSLLEALFLGITMLYFPITGRLKKLSMLKADRNAI 305

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
           T L   +G+   LTE                       + L+ NLL ++PSS+GNL+ L+
Sbjct: 306 TQLTPAIGSCHALTE-----------------------IYLTENLLTEIPSSLGNLKSLR 342

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
            L+L++N+L+ LP  IG    L  L L+ N +  LP  IG L NL  L V  N L  +P 
Sbjct: 343 TLNLDKNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEIGRLENLRVLDVCNNRLNYLPF 402

Query: 513 EIGTLENLHTLYLNDN 528
            +  L  L  L+L++N
Sbjct: 403 TVNVLFKLRALWLSEN 418



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 127/394 (32%), Positives = 204/394 (51%), Gaps = 25/394 (6%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           +++K   RC++  IL+L  S++ +  LP  +  LT+LEEL L GN ++ LP +I     L
Sbjct: 51  DLDKPLFRCRKLKILSL--SENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQL 108

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
             L L+ N +T LP +++ L  +  L L    L ++P  + +L +L+ L +R N ++TV 
Sbjct: 109 KILDLSSNPITRLPPTISQLTSMTSLGLNDISLTQMPHDIGQLRNLRSLEVRENLLRTVP 168

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
           P I  L  L  L +  N++ +LP E+  L+NL  L +  N LE LP+ I  C  L  LD+
Sbjct: 169 PSISQLKQLRRLDLGHNELDDLPNEISMLENLEELYVDQNDLEALPESIVQCRSLEQLDV 228

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
             N+L+ +PD +G+L  L  L +S N L+ +P ++    HL           SL + L  
Sbjct: 229 SENKLMLLPDEIGDLEKLDDLTVSQNCLQVLPSSIGNN-HLRSL--------SLLEALFL 279

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
            +T +            +P  G  +   +  +  + N I ++   I S    L+++ + +
Sbjct: 280 GITML-----------YFPITG--RLKKLSMLKADRNAITQLTPAIGS-CHALTEIYLTE 325

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
           NLLT +P  LG    L  LNL  NQ+ +L   I    +L VL L +NL+++LP  IG L 
Sbjct: 326 NLLTEIPSSLGNLKSLRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEIGRLE 385

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
            L+ LD+  N+L  LP  +  L +L+ L L  NQ
Sbjct: 386 NLRVLDVCNNRLNYLPFTVNVLFKLRALWLSENQ 419



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 195/421 (46%), Gaps = 54/421 (12%)

Query: 170 QQLRVLDLRHNKLNELPMVVYK-LTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+ +LD R   L  +P  + +   +L+ +YL  N IK +   +     L +LS+ +N++
Sbjct: 13  RQVDMLDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEV 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LP ++  L  L  L+L  N + +LP+EI NC  L  LDL  N +  +P  +  L ++T
Sbjct: 73  IRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPPTISQLTSMT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L  +P  + +  +L    V    L ++P  +                     
Sbjct: 133 SLGLNDISLTQMPHDIGQLRNLRSLEVRENLLRTVPPSI--------------------- 171

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
               +Q   +  ++  HN++D +P  I S  +NL ++ +  N L +LP  +     L +L
Sbjct: 172 ----SQLKQLRRLDLGHNELDDLPNEI-SMLENLEELYVDQNDLEALPESIVQCRSLEQL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN--------------------- 447
           ++  N++  L ++I +L  L+ L +S N L+ LPSSIGN                     
Sbjct: 227 DVSENKLMLLPDEIGDLEKLDDLTVSQNCLQVLPSSIGNNHLRSLSLLEALFLGITMLYF 286

Query: 448 -----LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
                L+KL  L  + N +  L   IG    L  + L  N L  +P ++G+L +L  L++
Sbjct: 287 PITGRLKKLSMLKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNL 346

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
            +N L+ +P  IG   +L  L L DN  +  +P E+    NL+++ + N  L+ +P  + 
Sbjct: 347 DKNQLKELPPTIGGCTSLSVLSLRDN-LIEQLPLEIGRLENLRVLDVCNNRLNYLPFTVN 405

Query: 563 V 563
           V
Sbjct: 406 V 406


>gi|255082906|ref|XP_002504439.1| predicted protein [Micromonas sp. RCC299]
 gi|226519707|gb|ACO65697.1| predicted protein [Micromonas sp. RCC299]
          Length = 522

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/349 (35%), Positives = 181/349 (51%), Gaps = 36/349 (10%)

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           +P E+G L  L  LDL  N L  +P EIG  T LV   L  NEL ++P  +G L +L  L
Sbjct: 199 VPAEVGRLTALRELDLNGNQLTSVPVEIGQLTSLVKFGLGGNELTSVPAEIGQLTSLQWL 258

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            LS NRL SVP  + +                        LTS+  + L+ N+ T+ P+ 
Sbjct: 259 DLSDNRLASVPADIGQ------------------------LTSLEGLGLNGNQLTSVPAE 294

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              Q TS+  +    NQ+  +P  I  +  +LS++N+ +N LTS+P ++     L  L L
Sbjct: 295 -IWQLTSLKVLGLRGNQLTSVPAEI-GQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFL 352

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
           G N+++ +  +I  L +L  L L+NN L  +P+ I  L  L+ L L  N+L S+P EIG 
Sbjct: 353 GGNRLTSVPAEIGRLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGR 412

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+ L L  NQL S+P  IG LT L+ LS+  N L+S+P EIG L  L  L+LNDN  
Sbjct: 413 LTSLKGLALYGNQLTSVPAEIGQLTALTELSLQRNKLKSVPAEIGQLATLKELWLNDN-L 471

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPY 579
           L ++P E+     L  ++LD   L+ +P+          IR L+  G Y
Sbjct: 472 LTSVPAEIGQLRALTSLNLDRNRLTSVPA---------AIRELRAAGFY 511



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/324 (34%), Positives = 186/324 (57%), Gaps = 4/324 (1%)

Query: 103 ILNLDLSKSSITH-LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++ L+L    +T  +P  V +LT L EL L GN+L S+P +IG +T+L   GL  N LTS
Sbjct: 185 VVELELEDVGLTGAVPAEVGRLTALRELDLNGNQLTSVPVEIGQLTSLVKFGLGGNELTS 244

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  +  L  L+ LDL  N+L  +P  + +LTSL+ L L  N++ +V  +I  L++L +L
Sbjct: 245 VPAEIGQLTSLQWLDLSDNRLASVPADIGQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVL 304

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +R N++  +P E+G+L +L  L+L +N L  +P EI   T L  L L  N L ++P  +
Sbjct: 305 GLRGNQLTSVPAEIGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEI 364

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L +L+ L L+ N+L SVP  + +   L    + G  L+S+P   +  LTS+  + L  
Sbjct: 365 GRLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVP-AEIGRLTSLKGLALYG 423

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T+ P+    Q T++  ++ + N++  +P  I   A  L ++ + DNLLTS+P ++G 
Sbjct: 424 NQLTSVPA-EIGQLTALTELSLQRNKLKSVPAEIGQLA-TLKELWLNDNLLTSVPAEIGQ 481

Query: 402 WVGLTELNLGTNQISKLSEDIQNL 425
              LT LNL  N+++ +   I+ L
Sbjct: 482 LRALTSLNLDRNRLTSVPAAIREL 505



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/348 (32%), Positives = 181/348 (52%), Gaps = 30/348 (8%)

Query: 125 HLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNE 184
            LE++ L G    ++P+++G +T L  L L  N LTS+P  +  L  L    L  N+L  
Sbjct: 189 ELEDVGLTG----AVPAEVGRLTALRELDLNGNQLTSVPVEIGQLTSLVKFGLGGNELTS 244

Query: 185 LPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTL 244
           +P  + +LTSL+ L L  NR+ +V  DI  L++L  L +  N++  +P E+ +L +L  L
Sbjct: 245 VPAEIGQLTSLQWLDLSDNRLASVPADIGQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVL 304

Query: 245 DLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETL 304
            L  N L  +P EIG  T L  L+L +N+L ++P  +  L +L  L L  NRL SVP  +
Sbjct: 305 GLRGNQLTSVPAEIGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEI 364

Query: 305 SKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFE 364
            +   L+E N+    L+S+P  +   LTS+  + L  N+ T+ P+               
Sbjct: 365 GRLTSLSELNLNNNQLTSVPAEIWQ-LTSLRGLFLGGNRLTSVPA--------------- 408

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN 424
                        R  +L  + +  N LTS+P ++G    LTEL+L  N++  +  +I  
Sbjct: 409 ----------EIGRLTSLKGLALYGNQLTSVPAEIGQLTALTELSLQRNKLKSVPAEIGQ 458

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           L  L+ L L++NLL  +P+ IG LR L  L+L+ N+L S+P  I  L+
Sbjct: 459 LATLKELWLNDNLLTSVPAEIGQLRALTSLNLDRNRLTSVPAAIRELR 506



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/308 (35%), Positives = 169/308 (54%), Gaps = 3/308 (0%)

Query: 207 TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
            V  ++  L+ L  L +  N++  +P E+G+L +LV   L  N L  +P EIG  T L  
Sbjct: 198 AVPAEVGRLTALRELDLNGNQLTSVPVEIGQLTSLVKFGLGGNELTSVPAEIGQLTSLQW 257

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           LDL  N L ++P  +G L +L  L L+ N+L SVP  + +   L    + G  L+S+P  
Sbjct: 258 LDLSDNRLASVPADIGQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVLGLRGNQLTSVP-A 316

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
            +  LTS++ + L+ N+ T+ P+    Q TS+  +    N++  +P  I  R  +LS++N
Sbjct: 317 EIGQLTSLSELNLNNNQLTSVPAE-IWQLTSLRGLFLGGNRLTSVPAEI-GRLTSLSELN 374

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           + +N LTS+P ++     L  L LG N+++ +  +I  L +L+ L L  N L  +P+ IG
Sbjct: 375 LNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLKGLALYGNQLTSVPAEIG 434

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            L  L  L L+ NKL+S+P EIG L  L+ L L  N L S+P  IG L  L+ L++  N 
Sbjct: 435 QLTALTELSLQRNKLKSVPAEIGQLATLKELWLNDNLLTSVPAEIGQLRALTSLNLDRNR 494

Query: 507 LQSIPEEI 514
           L S+P  I
Sbjct: 495 LTSVPAAI 502



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 151/273 (55%), Gaps = 28/273 (10%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           +++   L  + +T +P  + +LT L+ L L  N+LAS+P+ IG +T+L  LGL  N LTS
Sbjct: 231 SLVKFGLGGNELTSVPAEIGQLTSLQWLDLSDNRLASVPADIGQLTSLEGLGLNGNQLTS 290

Query: 162 LPDSLANLQQLRVLDLR-----------------------HNKLNELPMVVYKLTSLKIL 198
           +P  +  L  L+VL LR                       +N+L  +P  +++LTSL+ L
Sbjct: 291 VPAEIWQLTSLKVLGLRGNQLTSVPAEIGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGL 350

Query: 199 YLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
           +L  NR+ +V  +I  L++LS L++ +N++  +P E+ +L +L  L L  N L  +P EI
Sbjct: 351 FLGGNRLTSVPAEIGRLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEI 410

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
           G  T L  L L  N+L ++P  +G L  LT L L  N+L+SVP  + +   L E  +   
Sbjct: 411 GRLTSLKGLALYGNQLTSVPAEIGQLTALTELSLQRNKLKSVPAEIGQLATLKELWLNDN 470

Query: 319 ALSSLPD--GLLSSLTSINNITLSRNKFTAYPS 349
            L+S+P   G L +LTS+N   L RN+ T+ P+
Sbjct: 471 LLTSVPAEIGQLRALTSLN---LDRNRLTSVPA 500



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 99/172 (57%), Gaps = 1/172 (0%)

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
            L  ++P ++G    L EL+L  NQ++ +  +I  L +L    L  N L  +P+ IG L 
Sbjct: 194 GLTGAVPAEVGRLTALRELDLNGNQLTSVPVEIGQLTSLVKFGLGGNELTSVPAEIGQLT 253

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            L+ LDL +N+L S+P +IG L  L+ L L  NQL S+P  I  LT+L  L +  N L S
Sbjct: 254 SLQWLDLSDNRLASVPADIGQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVLGLRGNQLTS 313

Query: 510 IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +P EIG L +L  L LN+N  L ++P E+   ++L+ + L    L+ +P+EI
Sbjct: 314 VPAEIGQLTSLSELNLNNNQ-LTSVPAEIWQLTSLRGLFLGGNRLTSVPAEI 364



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 81/134 (60%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+L+ + +T +P  + +LT L  L+L GN+L S+P++IG +T+L  L L  N LTS+P  
Sbjct: 373 LNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLKGLALYGNQLTSVPAE 432

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L  L L+ NKL  +P  + +L +LK L+L  N + +V  +I  L  L+ L++  
Sbjct: 433 IGQLTALTELSLQRNKLKSVPAEIGQLATLKELWLNDNLLTSVPAEIGQLRALTSLNLDR 492

Query: 226 NKIRELPPELGELK 239
           N++  +P  + EL+
Sbjct: 493 NRLTSVPAAIRELR 506


>gi|379728469|ref|YP_005320665.1| putative lipoprotein [Saprospira grandis str. Lewin]
 gi|378574080|gb|AFC23081.1| putative lipoprotein [Saprospira grandis str. Lewin]
          Length = 484

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 142/441 (32%), Positives = 224/441 (50%), Gaps = 37/441 (8%)

Query: 87  ADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNK-LASLPSQIGY 145
           ADL+I  + L  +EE           ++ LP ++ + + L  L L+G + L  LP +IG 
Sbjct: 54  ADLDISYQALVLEEE----------ELSSLPATIGQYSELRYLSLWGQEALEELPEEIGQ 103

Query: 146 VTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRI 205
           + NL  L L    +  LP S+  LQ LR+LDL + +L +LP  + +L +L+ L       
Sbjct: 104 LQNLEVLILNSTGIKRLPASIGQLQNLRILDLGNCQLQQLPEGLGQLQALEAL------- 156

Query: 206 KTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
                      NLS      N++ ELPP +G+L+ L   DL+ N L+ELP E    T L 
Sbjct: 157 -----------NLSA-----NQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLE 200

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
            L L++N L  +P   G L+ L  L L+ N+L+ +P +L +   L    ++   L  LP 
Sbjct: 201 ELALENNLLSFLPSNFGGLVALKTLVLAENQLDQLPASLGQLKQLELLELQDNDLGQLP- 259

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
             +  L S+  + LS N     P     Q  ++ S+    N++ ++P   F++ KNL ++
Sbjct: 260 AQIGQLQSLVELDLSDNFLQQLPPE-IGQLQALKSLFITENELQQLP-AEFAQLKNLQEL 317

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
            +++N LT+LP + G    L EL L  N++  L + I+ L  L  L LSNN +   P + 
Sbjct: 318 QLQENKLTALPRNFGKLSQLEELQLSENKLEALPKSIKRLKKLSSLNLSNNEIYLFPKNA 377

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
             ++ L  LDLE N +E LP EI  L+ L+ LIL  N+L +LP  +  L+ L  L + +N
Sbjct: 378 SGIKNLIALDLEGNYIEELPEEIQELQNLEFLILYDNELRNLPPYLQDLSALRRLDISDN 437

Query: 506 NLQSIPEEIGTLENLHTLYLN 526
             ++ PE +  +  L  L LN
Sbjct: 438 EFEAFPEVLYQMRQLKDLILN 458



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 185/365 (50%), Gaps = 4/365 (1%)

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNR-IKTVHPDIQYLSNLSMLSMRDNKIREL 231
           + L L   +L+ LP  + + + L+ L L     ++ +  +I  L NL +L +    I+ L
Sbjct: 61  QALVLEEEELSSLPATIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRL 120

Query: 232 PPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLR 291
           P  +G+L+NL  LDL +  L++LP+ +G    L  L+L  N+L  +P  +G L  L    
Sbjct: 121 PASIGQLQNLRILDLGNCQLQQLPEGLGQLQALEALNLSANQLEELPPSIGQLQALKMAD 180

Query: 292 LSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGG 351
           LS NRL+ +P   S+   L E  +E   LS LP      L ++  + L+ N+    P+  
Sbjct: 181 LSSNRLQELPNEFSQLTQLEELALENNLLSFLPSNF-GGLVALKTLVLAENQLDQLPASL 239

Query: 352 PTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLG 411
                       + N + ++P  I  + ++L ++++ DN L  LP ++G    L  L + 
Sbjct: 240 GQLKQLELLELQD-NDLGQLPAQI-GQLQSLVELDLSDNFLQQLPPEIGQLQALKSLFIT 297

Query: 412 TNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
            N++ +L  +   L NL+ L L  N L  LP + G L +L+ L L ENKLE+LP  I  L
Sbjct: 298 ENELQQLPAEFAQLKNLQELQLQENKLTALPRNFGKLSQLEELQLSENKLEALPKSIKRL 357

Query: 472 KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
           K+L  L L +N++   P+    + NL  L +  N ++ +PEEI  L+NL  L L DN   
Sbjct: 358 KKLSSLNLSNNEIYLFPKNASGIKNLIALDLEGNYIEELPEEIQELQNLEFLILYDNELR 417

Query: 532 NNIPF 536
           N  P+
Sbjct: 418 NLPPY 422



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 196/396 (49%), Gaps = 28/396 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L+ + I  LP S+ +L +L  L L   +L  LP  +G +  L  L L+ N L 
Sbjct: 105 QNLEVLILNSTGIKRLPASIGQLQNLRILDLGNCQLQQLPEGLGQLQALEALNLSANQLE 164

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP S+  LQ L++ DL  N+L ELP    +LT L+ L L  N +  +  +   L  L  
Sbjct: 165 ELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALENNLLSFLPSNFGGLVALKT 224

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++ +LP  LG+LK L  L+L  N L +LP +IG    LV LDL  N L  +P  
Sbjct: 225 LVLAENQLDQLPASLGQLKQLELLELQDNDLGQLPAQIGQLQSLVELDLSDNFLQQLPPE 284

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L  L  L ++ N L+ +P   ++  +L E  ++   L++LP      L+ +  + LS
Sbjct: 285 IGQLQALKSLFITENELQQLPAEFAQLKNLQELQLQENKLTALPRN-FGKLSQLEELQLS 343

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            NK  A P                             R K LS +N+ +N +   P +  
Sbjct: 344 ENKLEALPKS-------------------------IKRLKKLSSLNLSNNEIYLFPKNAS 378

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N I +L E+IQ L NLE L+L +N L+ LP  + +L  L+ LD+ +N+
Sbjct: 379 GIKNLIALDLEGNYIEELPEEIQELQNLEFLILYDNELRNLPPYLQDLSALRRLDISDNE 438

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
            E+ P  +  +++L+ LIL  +Q    P  I  L N
Sbjct: 439 FEAFPEVLYQMRQLKDLILNVDQFE--PTKIQTLKN 472



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 180/355 (50%), Gaps = 7/355 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL    +  LP  + +L  LE L L  N+L  LP  IG +  L    L+ N L 
Sbjct: 128 QNLRILDLGNCQLQQLPEGLGQLQALEALNLSANQLEELPPSIGQLQALKMADLSSNRLQ 187

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP+  + L QL  L L +N L+ LP     L +LK L L  N++  +   +  L  L +
Sbjct: 188 ELPNEFSQLTQLEELALENNLLSFLPSNFGGLVALKTLVLAENQLDQLPASLGQLKQLEL 247

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L ++DN + +LP ++G+L++LV LDL+ N L++LP EIG    L +L +  NEL  +P  
Sbjct: 248 LELQDNDLGQLPAQIGQLQSLVELDLSDNFLQQLPPEIGQLQALKSLFITENELQQLPAE 307

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
              L NL  L+L  N+L ++P    K   L E  +    L +LP   +  L  ++++ LS
Sbjct: 308 FAQLKNLQELQLQENKLTALPRNFGKLSQLEELQLSENKLEALPKS-IKRLKKLSSLNLS 366

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+   +P    +   ++ +++ E N I+++P  I    +NL  + + DN L +LP  L 
Sbjct: 367 NNEIYLFPKNA-SGIKNLIALDLEGNYIEELPEEI-QELQNLEFLILYDNELRNLPPYLQ 424

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL--RKLKC 453
               L  L++  N+     E +  +  L+ L+L+ +  +  P+ I  L  R L C
Sbjct: 425 DLSALRRLDISDNEFEAFPEVLYQMRQLKDLILNVDQFE--PTKIQTLKNRLLNC 477



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 152/294 (51%), Gaps = 6/294 (2%)

Query: 267 LDLQHNELVNIPDMLGNL-INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC-ALSSLP 324
           LDL+    +   + L +L I+   L L    L S+P T+ +   L   ++ G  AL  LP
Sbjct: 39  LDLEDGRRLLQAERLADLDISYQALVLEEEELSSLPATIGQYSELRYLSLWGQEALEELP 98

Query: 325 DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
           + +   L ++  + L+       P+    Q  ++  ++  + Q+ ++P G+  + + L  
Sbjct: 99  EEI-GQLQNLEVLILNSTGIKRLPAS-IGQLQNLRILDLGNCQLQQLPEGL-GQLQALEA 155

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
           +N+  N L  LP  +G    L   +L +N++ +L  +   L  LE L L NNLL  LPS+
Sbjct: 156 LNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALENNLLSFLPSN 215

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
            G L  LK L L EN+L+ LP  +G LK+L+ L LQ N L  LP  IG L +L  L + +
Sbjct: 216 FGGLVALKTLVLAENQLDQLPASLGQLKQLELLELQDNDLGQLPAQIGQLQSLVELDLSD 275

Query: 505 NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           N LQ +P EIG L+ L +L++ +N  L  +P E A   NLQ + L    L+ +P
Sbjct: 276 NFLQQLPPEIGQLQALKSLFITENE-LQQLPAEFAQLKNLQELQLQENKLTALP 328



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 118/239 (49%), Gaps = 42/239 (17%)

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN-------M 387
           N+I L++   +A PSG        Y ++ E  +          +A+ L+ ++       +
Sbjct: 14  NSILLAQLNMSAAPSGQAKAVKEQY-LDLEDGRR-------LLQAERLADLDISYQALVL 65

Query: 388 KDNLLTSLPLDLGTWVGLTELNL-GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           ++  L+SLP  +G +  L  L+L G   + +L E+I  L NLEVL+L++  +K+LP+SIG
Sbjct: 66  EEEELSSLPATIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIG 125

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            L+ L+ LDL   +L+ LP  +G L+ L+ L L +NQL  LP +IG L  L    +  N 
Sbjct: 126 QLQNLRILDLGNCQLQQLPEGLGQLQALEALNLSANQLEELPPSIGQLQALKMADLSSNR 185

Query: 507 LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGG 565
           LQ +P E   L  L                ELAL +NL         LS +PS    GG
Sbjct: 186 LQELPNEFSQLTQLE---------------ELALENNL---------LSFLPSNF--GG 218


>gi|398341355|ref|ZP_10526058.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 401

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/358 (34%), Positives = 189/358 (52%), Gaps = 26/358 (7%)

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           + T L  +L N   +RVLDL   KL  LP  + +L +L++L L  N++ T+  +I  L N
Sbjct: 34  AYTDLTKALKNPLDVRVLDLNEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQN 93

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N++   P E+G+LKNL TL L+ N L  LPKEIG    L  L L  N+    
Sbjct: 94  LQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAF 153

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  +G L NL +L L  N+L+++P  + +  +L E ++    L +L              
Sbjct: 154 PKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTL-------------- 199

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
                      S    Q  ++  ++   NQ+  +P  I  + KNL  +++ +N   ++P 
Sbjct: 200 -----------SAEIGQLQNLQVLDLNDNQLKTLPKEI-GQLKNLQMLDLNNNQFKTVPE 247

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++G    L  L+LG NQ   + E+I  L NL++L L+NN  K +P   G L+ L+ L L 
Sbjct: 248 EIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLN 307

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
            N+L +LPNEI  LK L+ L L  NQL +L   IG L NL  LS+ +N L+++P+EIG
Sbjct: 308 ANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEIG 365



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/345 (34%), Positives = 187/345 (54%), Gaps = 27/345 (7%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L + + K++ LP E+G+L+NL  L+L +N L  LPKEIG    L  L L  N+L  
Sbjct: 47  DVRVLDLNEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTT 106

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
            P  +G L NL  L LS NRL ++P+ + +  +L E                        
Sbjct: 107 FPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRE------------------------ 142

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L+ N+FTA+P     Q  ++  +N   NQ+  +P  I  + +NL ++++  N L +L 
Sbjct: 143 LYLNTNQFTAFPK-EIGQLKNLQQLNLYANQLKTLPNEI-GQLQNLRELHLSYNQLKTLS 200

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  L+L  NQ+  L ++I  L NL++L L+NN  K +P  IG L+ L+ LDL
Sbjct: 201 AEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDL 260

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+ +++P EIG LK LQ L L +NQ  ++P   G L NL  LS+  N L ++P EI  
Sbjct: 261 GYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQ 320

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+NL  L+L+ N  L  +  E+    NL+ +SL +  L  +P EI
Sbjct: 321 LKNLRELHLSYNQ-LKTLSAEIGQLKNLKKLSLRDNQLKTLPKEI 364



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 174/300 (58%), Gaps = 3/300 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L+ + +  LP  + +L +L+EL+L GN+L + P +IG + NL  L L++N LT
Sbjct: 69  QNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLT 128

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ LR L L  N+    P  + +L +L+ L L  N++KT+  +I  L NL  
Sbjct: 129 TLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRE 188

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ L  E+G+L+NL  LDL  N L+ LPKEIG    L  LDL +N+   +P+ 
Sbjct: 189 LHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEE 248

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L YN+ ++VPE + +  +L    +      ++P+     L ++  ++L+
Sbjct: 249 IGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEE-TGQLKNLQMLSLN 307

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P+    Q  ++  ++  +NQ+  +   I  + KNL K++++DN L +LP ++G
Sbjct: 308 ANQLTTLPN-EIRQLKNLRELHLSYNQLKTLSAEI-GQLKNLKKLSLRDNQLKTLPKEIG 365



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/309 (34%), Positives = 165/309 (53%), Gaps = 27/309 (8%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  LDL   +L  +P  +G L NL  L L+ N+L ++P+ + +  +L E
Sbjct: 37  DLTKALKNPLDVRVLDLNEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQE 96

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            ++ G  L++ P  +   L ++  + LS+N+ T  P                        
Sbjct: 97  LHLSGNQLTTFPKEI-GQLKNLQTLVLSKNRLTTLPKE---------------------- 133

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
                + KNL ++ +  N  T+ P ++G    L +LNL  NQ+  L  +I  L NL  L 
Sbjct: 134 ---IGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELH 190

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           LS N LK L + IG L+ L+ LDL +N+L++LP EIG LK LQ L L +NQ  ++P  IG
Sbjct: 191 LSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIG 250

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L +G N  +++PEEIG L+NL  L+LN+N     +P E     NLQ++SL+  
Sbjct: 251 QLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQ-FKTVPEETGQLKNLQMLSLNAN 309

Query: 553 PLSQIPSEI 561
            L+ +P+EI
Sbjct: 310 QLTTLPNEI 318



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 113/345 (32%), Positives = 180/345 (52%), Gaps = 26/345 (7%)

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
           ++  L L E  L +LP  +  LQ L+VL+L +N+L  LP  + +L +L+ L+L  N++ T
Sbjct: 47  DVRVLDLNEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTT 106

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
              +I  L NL  L +  N++  LP E+G+LKNL  L L  N     PKEIG    L  L
Sbjct: 107 FPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQL 166

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
           +L  N+L  +P+ +G L NL  L LSYN+L+++   + +  +L   ++    L +LP  +
Sbjct: 167 NLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEI 226

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
                                     Q  ++  ++  +NQ   +P  I  + KNL  +++
Sbjct: 227 -------------------------GQLKNLQMLDLNNNQFKTVPEEI-GQLKNLQVLDL 260

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
             N   ++P ++G    L  L L  NQ   + E+   L NL++L L+ N L  LP+ I  
Sbjct: 261 GYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQ 320

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L+ L+ L L  N+L++L  EIG LK L++L L+ NQL +LP+ IG
Sbjct: 321 LKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEIG 365



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 112/335 (33%), Positives = 173/335 (51%), Gaps = 26/335 (7%)

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           KL +LP +IG + NL  L L  N L +LP  +  LQ L+ L L  N+L   P  + +L +
Sbjct: 57  KLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKN 116

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L+ L L  NR+ T+  +I  L NL  L +  N+    P E+G+LKNL  L+L  N L+ L
Sbjct: 117 LQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTL 176

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P EIG    L  L L +N+L  +   +G L NL  L L+ N+L+++P+ + +        
Sbjct: 177 PNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQ-------- 228

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
                           L ++  + L+ N+F   P     Q  ++  ++  +NQ   +P  
Sbjct: 229 ----------------LKNLQMLDLNNNQFKTVPE-EIGQLKNLQVLDLGYNQFKTVPEE 271

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           I  + KNL  + + +N   ++P + G    L  L+L  NQ++ L  +I+ L NL  L LS
Sbjct: 272 I-GQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLS 330

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
            N LK L + IG L+ LK L L +N+L++LP EIG
Sbjct: 331 YNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEIG 365


>gi|260788624|ref|XP_002589349.1| hypothetical protein BRAFLDRAFT_77802 [Branchiostoma floridae]
 gi|229274526|gb|EEN45360.1| hypothetical protein BRAFLDRAFT_77802 [Branchiostoma floridae]
          Length = 1364

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 141/502 (28%), Positives = 242/502 (48%), Gaps = 48/502 (9%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + + +L ++++ +T+LPP +EKL  L  L + GN+L  +PS I  + NL  L ++ N LT
Sbjct: 81  QKLTHLYVNRNKLTNLPPGIEKLQKLTLLSICGNQLTEVPSGIYLLPNLEFLVVSNNKLT 140

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +    +  L++LR L +  N+L E+P  V  L +L++L +  N++ T  P ++ L  L  
Sbjct: 141 AFNPGVEKLKKLRKLFINGNQLTEVPAGVCSLPNLELLDVDNNKLSTFPPGVEKLQKLRE 200

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN++ E P  +  L NL  L++++N +  LP ++   T L TL ++  +    P  
Sbjct: 201 LYINDNQLTEAPSGVCSLPNLAVLNVSNNPIRRLPDDVTQLTRLKTLSVRGCQFDEFPRQ 260

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  L  L     + + VP+ +    HL    ++   L +LP   +S + ++  + L 
Sbjct: 261 VLQLKTLVVLYAGGCKFDIVPDEVGSLQHLQVLALDKNLLRTLP-STMSHMHNLREVYLH 319

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD-- 398
            NKF  +P     +  ++  ++  +N I ++P  +  RA  L  +++  N LT  P D  
Sbjct: 320 GNKFNTFPEVL-CELPAMEKLDISNNNITRLPTALH-RADKLEVLDVSGNPLTYPPHDVC 377

Query: 399 -------------------LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
                              L T  G  +++L    ++ + E++ ++ +LEVL +SNN L 
Sbjct: 378 EQGTGAILAFLKQKAENLQLQTVRGCLQVDLTDQGLTSIPEEVFDITDLEVLDVSNNELT 437

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGF-----------------------LKELQR 476
            +P +IG L KL  L  + N L SLP  I                         L++L  
Sbjct: 438 SIPEAIGRLHKLSRLHADGNMLTSLPQAIASMLELTHLFINDNKLSTFPPGVEKLQKLAH 497

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
           L +  NQL  +P  +  L NL  L V  NNL + P  +  L+ L  LY++DN  L  +P 
Sbjct: 498 LFMNDNQLREVPPGVCSLPNLEVLCVRSNNLSTFPPGVEKLQKLRELYIHDNQ-LTEVPP 556

Query: 537 ELALCSNLQIMSLDNCPLSQIP 558
            L   SNL++  + N  LS +P
Sbjct: 557 GLCSLSNLEVFIVINNELSTLP 578



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 131/515 (25%), Positives = 226/515 (43%), Gaps = 53/515 (10%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+  LD+  + ++  PP VEKL  L ELY+  N+L   PS +  + NL  L ++ N
Sbjct: 170 CSLPNLELLDVDNNKLSTFPPGVEKLQKLRELYINDNQLTEAPSGVCSLPNLAVLNVSNN 229

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            +  LPD +  L +L+ L +R  + +E P  V +L +L +LY    +   V  ++  L +
Sbjct: 230 PIRRLPDDVTQLTRLKTLSVRGCQFDEFPRQVLQLKTLVVLYAGGCKFDIVPDEVGSLQH 289

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L +L++  N +R LP  +  + NL  + L  N     P+ +     +  LD+ +N +  +
Sbjct: 290 LQVLALDKNLLRTLPSTMSHMHNLREVYLHGNKFNTFPEVLCELPAMEKLDISNNNITRL 349

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETL-------------SKCVHLNEFNVEGCALSSLP 324
           P  L     L  L +S N L   P  +              K  +L    V GC    L 
Sbjct: 350 PTALHRADKLEVLDVSGNPLTYPPHDVCEQGTGAILAFLKQKAENLQLQTVRGCLQVDLT 409

Query: 325 DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
           D     LTSI                     T +  ++  +N++  IP  I  R   LS+
Sbjct: 410 D---QGLTSIPEEVFD--------------ITDLEVLDVSNNELTSIPEAI-GRLHKLSR 451

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
           ++   N+LTSLP  + + + LT L +  N++S     ++ L  L  L +++N L+++P  
Sbjct: 452 LHADGNMLTSLPQAIASMLELTHLFINDNKLSTFPPGVEKLQKLAHLFMNDNQLREVPPG 511

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
           + +L  L+ L +  N L + P  +  L++L+ L +  NQL  +P  +  L+NL    V  
Sbjct: 512 VCSLPNLEVLCVRSNNLSTFPPGVEKLQKLRELYIHDNQLTEVPPGLCSLSNLEVFIVIN 571

Query: 505 NNLQSIPEEIGTLENLHTLYLNDNT--------C--------------LNNIPFELALCS 542
           N L ++P  +  L  L  + L +N         C              +  +P  L    
Sbjct: 572 NELSTLPPGMSQLLKLREILLGNNKFDTFPEVLCELPAMEELDIRNNNITRLPTALHRAD 631

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQG 577
            L+ + +   PL+  P ++   G   I+ +LK + 
Sbjct: 632 KLKDLDVSGNPLTYPPQDVCKQGTGAIMAFLKQEA 666



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 209/448 (46%), Gaps = 27/448 (6%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           +A L  Q   V  L  L L+   LTS+P+ + ++  L VLD+  NKL  +P  + +L  L
Sbjct: 1   MAGLNLQPQTVNGLLTLDLSNQGLTSIPEEVFDITDLEVLDVSKNKLTSIPEAIGRLRKL 60

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
             L+   N + ++   I  L  L+ L +  NK+  LPP + +L+ L  L +  N L E+P
Sbjct: 61  SRLHADGNMLTSLQQAIGSLQKLTHLYVNRNKLTNLPPGIEKLQKLTLLSICGNQLTEVP 120

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
             I     L  L + +N+L      +  L  L +L ++ N+L  VP  +    +L   +V
Sbjct: 121 SGIYLLPNLEFLVVSNNKLTAFNPGVEKLKKLRKLFINGNQLTEVPAGVCSLPNLELLDV 180

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
           +   LS+ P G +  L  +  + ++ N+ T  PSG      ++  +N  +N I ++P  +
Sbjct: 181 DNNKLSTFPPG-VEKLQKLRELYINDNQLTEAPSGV-CSLPNLAVLNVSNNPIRRLPDDV 238

Query: 376 --FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
              +R K LS    + +      L L T   L  L  G  +   + +++ +L +L+VL L
Sbjct: 239 TQLTRLKTLSVRGCQFDEFPRQVLQLKT---LVVLYAGGCKFDIVPDEVGSLQHLQVLAL 295

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
             NLL+ LPS++ ++  L+ + L  NK  + P  +  L  +++L + +N +  LP A+  
Sbjct: 296 DKNLLRTLPSTMSHMHNLREVYLHGNKFNTFPEVLCELPAMEKLDISNNNITRLPTALHR 355

Query: 494 LTNLSYLSVGENNLQSIPEEI---GT----------LENLHTLYLND-------NTCLNN 533
              L  L V  N L   P ++   GT           ENL    +         +  L +
Sbjct: 356 ADKLEVLDVSGNPLTYPPHDVCEQGTGAILAFLKQKAENLQLQTVRGCLQVDLTDQGLTS 415

Query: 534 IPFELALCSNLQIMSLDNCPLSQIPSEI 561
           IP E+   ++L+++ + N  L+ IP  I
Sbjct: 416 IPEEVFDITDLEVLDVSNNELTSIPEAI 443



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 136/262 (51%), Gaps = 10/262 (3%)

Query: 95  FLRCKEENI--------LNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYV 146
           FL+ K EN+        L +DL+   +T +P  V  +T LE L +  N+L S+P  IG +
Sbjct: 387 FLKQKAENLQLQTVRGCLQVDLTDQGLTSIPEEVFDITDLEVLDVSNNELTSIPEAIGRL 446

Query: 147 TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK 206
             L+ L    N LTSLP ++A++ +L  L +  NKL+  P  V KL  L  L++  N+++
Sbjct: 447 HKLSRLHADGNMLTSLPQAIASMLELTHLFINDNKLSTFPPGVEKLQKLAHLFMNDNQLR 506

Query: 207 TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
            V P +  L NL +L +R N +   PP + +L+ L  L +  N L E+P  + + + L  
Sbjct: 507 EVPPGVCSLPNLEVLCVRSNNLSTFPPGVEKLQKLRELYIHDNQLTEVPPGLCSLSNLEV 566

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
             + +NEL  +P  +  L+ L  + L  N+ ++ PE L +   + E ++    ++ LP  
Sbjct: 567 FIVINNELSTLPPGMSQLLKLREILLGNNKFDTFPEVLCELPAMEELDIRNNNITRLPTA 626

Query: 327 LLSSLTSINNITLSRNKFTAYP 348
           L  +   + ++ +S N  T YP
Sbjct: 627 LHRA-DKLKDLDVSGNPLT-YP 646


>gi|291240350|ref|XP_002740092.1| PREDICTED: PDZ-domain protein scribble-like [Saccoglossus
           kowalevskii]
          Length = 1630

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 136/392 (34%), Positives = 200/392 (51%), Gaps = 41/392 (10%)

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           KLASLP  I    +   L L  NS ++LP  +++L++L  L+L  N +  +PM +YKLT+
Sbjct: 35  KLASLPPSIAEYKDCERLNLRCNSFSTLPPEISHLKKLNELNLSENCIENIPMSLYKLTA 94

Query: 195 LKILYLRFNR-IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           L +L +  N  I  + PDI  L NL  L +  N I E+P  +  L  L  LDL +N L  
Sbjct: 95  LTVLNMNGNEIIGKLQPDISKLVNLQKLDLSVNNIEEIPRTILNLCALQELDLHYNMLST 154

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           +P E+G    L  L+L  N+L  +P  LGNL  L  LR+S N+L SV             
Sbjct: 155 IPCEVGQLVHLTDLNLSQNQLTELPITLGNLKRLQSLRVSDNKLLSV------------- 201

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
                   S+  G+L  L +++   LS+N+    PS    +  S+  ++ + N++  +P 
Sbjct: 202 --------SMEIGMLVELRTLD---LSKNEIVEIPS-SIGKLKSLKMLHIDRNKLTNLPI 249

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
            I  + KNL ++NM  N +   P  +G  V L  LN   NQ+  L     NL  L  + +
Sbjct: 250 DI-GKLKNLQEINMSMNKILDFPESIGGLVNLQFLNAKNNQLKCLPVSFVNLSKLREVNV 308

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG--------------FLKELQRLIL 479
           SNN ++ LP SIG L+ LK LD+  N LESLP  IG               L+EL  L +
Sbjct: 309 SNNYIESLPRSIGKLKDLKYLDISHNHLESLPPSIGECILVSKHVITCWKMLRELTSLKM 368

Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
             NQ+  LPR IG+L++LS L + +N ++  P
Sbjct: 369 MRNQIKVLPREIGYLSSLSTLVIDDNPIREPP 400



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 148/518 (28%), Positives = 242/518 (46%), Gaps = 75/518 (14%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLSK+ I  +P S+ KL  L+ L++  NKL +LP  IG + NL  + ++ N +   P+S
Sbjct: 214 LDLSKNEIVEIPSSIGKLKSLKMLHIDRNKLTNLPIDIGKLKNLQEINMSMNKILDFPES 273

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L+ L+ ++N+L  LP+    L+ L+ + +  N I+++   I  L +L  L +  
Sbjct: 274 IGGLVNLQFLNAKNNQLKCLPVSFVNLSKLREVNVSNNYIESLPRSIGKLKDLKYLDISH 333

Query: 226 NKIRELPPELGE--------------LKNLVTLDLAHNHLEELPKEIGNCTMLVTL---- 267
           N +  LPP +GE              L+ L +L +  N ++ LP+EIG  + L TL    
Sbjct: 334 NHLESLPPSIGECILVSKHVITCWKMLRELTSLKMMRNQIKVLPREIGYLSSLSTLVIDD 393

Query: 268 ----------------------------------------DLQHNELVNIPDMLGNLINL 287
                                                    L+ N+L  IP  +    ++
Sbjct: 394 NPIREPPMVICNEGILGLQKYWQKKDQELLKNVKPNSEKVSLKQNDLTYIPKSISQYTHI 453

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            +L LS N+L  +P  + +   L   ++    L  LP G  S L  +N   LSRN  T +
Sbjct: 454 QQLDLSRNKLSYLPLEMCQLTQLENLDISNNNLIDLP-GSFSDLKILN---LSRNNLTEF 509

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK---VNMKDNLLTSLPLDLGTWVG 404
           P        ++  I+   N +  I  G+     NLSK   VNM+D  L + PL L +   
Sbjct: 510 PDN----LENIQQIDISQNCLQNIHIGM-----NLSKLTHVNMRDTKLKNFPLQLCSASE 560

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L  LNL  N I ++   I NL  L ++ +  N ++ +P  IGN+ +LK L +  NK+ ++
Sbjct: 561 LYHLNLSCNNIEEIPPGICNLQRLAIIDVCENKIRSIPKEIGNMNRLKELHISNNKIGNI 620

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P  +  L+EL  L +++N L  LP   G L  L  L +  N     P  I  L  L  LY
Sbjct: 621 PEPLCKLRELTLLDIRNNNLKELPPQFGELHELQILQLSGNVFNEFPPAISKLTKLVKLY 680

Query: 525 LNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           L+ N  + +IP  +    +L+ MS+D   ++++P+E++
Sbjct: 681 LSGNN-MTSIPSTIGRLKSLEEMSIDGNIITELPAELL 717



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 148/532 (27%), Positives = 253/532 (47%), Gaps = 74/532 (13%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS ++I  +P ++  L  L+EL L+ N L+++P ++G + +LT L L++N LT 
Sbjct: 118 NLQKLDLSVNNIEEIPRTILNLCALQELDLHYNMLSTIPCEVGQLVHLTDLNLSQNQLTE 177

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +L NL++L+ L +  NKL  + M +  L  L+ L L  N I  +   I  L +L ML
Sbjct: 178 LPITLGNLKRLQSLRVSDNKLLSVSMEIGMLVELRTLDLSKNEIVEIPSSIGKLKSLKML 237

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  NK+  LP ++G+LKNL  ++++ N + + P+ IG    L  L+ ++N+L  +P   
Sbjct: 238 HIDRNKLTNLPIDIGKLKNLQEINMSMNKILDFPESIGGLVNLQFLNAKNNQLKCLPVSF 297

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL-------------L 328
            NL  L  + +S N +ES+P ++ K   L   ++    L SLP  +              
Sbjct: 298 VNLSKLREVNVSNNYIESLPRSIGKLKDLKYLDISHNHLESLPPSIGECILVSKHVITCW 357

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY-----GIFSRAK--- 380
             L  + ++ + RN+    P       +S+ ++  + N I + P      GI    K   
Sbjct: 358 KMLRELTSLKMMRNQIKVLPR-EIGYLSSLSTLVIDDNPIREPPMVICNEGILGLQKYWQ 416

Query: 381 ------------NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
                       N  KV++K N LT +P  +  +  + +L+L  N++S L  ++  L  L
Sbjct: 417 KKDQELLKNVKPNSEKVSLKQNDLTYIPKSISQYTHIQQLDLSRNKLSYLPLEMCQLTQL 476

Query: 429 EVLVLSNNLLKKLPSSIG---------------------------------------NLR 449
           E L +SNN L  LP S                                         NL 
Sbjct: 477 ENLDISNNNLIDLPGSFSDLKILNLSRNNLTEFPDNLENIQQIDISQNCLQNIHIGMNLS 536

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
           KL  +++ + KL++ P ++    EL  L L  N +  +P  I +L  L+ + V EN ++S
Sbjct: 537 KLTHVNMRDTKLKNFPLQLCSASELYHLNLSCNNIEEIPPGICNLQRLAIIDVCENKIRS 596

Query: 510 IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           IP+EIG +  L  L++++N  + NIP  L     L ++ + N  L ++P + 
Sbjct: 597 IPKEIGNMNRLKELHISNNK-IGNIPEPLCKLRELTLLDIRNNNLKELPPQF 647



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 142/523 (27%), Positives = 243/523 (46%), Gaps = 71/523 (13%)

Query: 101  ENILNLDLSKSSI--THLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
            ENI  +D+S++ +   H+  ++ KLTH+    +   KL + P Q+   + L  L L+ N+
Sbjct: 514  ENIQQIDISQNCLQNIHIGMNLSKLTHVN---MRDTKLKNFPLQLCSASELYHLNLSCNN 570

Query: 159  LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
            +  +P  + NLQ+L ++D+  NK+  +P  +  +  LK L++  N+I  +   +  L  L
Sbjct: 571  IEEIPPGICNLQRLAIIDVCENKIRSIPKEIGNMNRLKELHISNNKIGNIPEPLCKLREL 630

Query: 219  SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            ++L +R+N ++ELPP+ GEL  L  L L+ N   E P  I   T LV L L  N + +IP
Sbjct: 631  TLLDIRNNNLKELPPQFGELHELQILQLSGNVFNEFPPAISKLTKLVKLYLSGNNMTSIP 690

Query: 279  DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL--------SS 330
              +G L +L  + +  N +  +P  L +   +    +E    + L D +          S
Sbjct: 691  STIGRLKSLEEMSIDGNIITELPAELLELQIIKLQLIENQQDTPLKDFVAELSRLKQNGS 750

Query: 331  LTSINNITLSRNK------FTAYPSG-------------GPTQFTSVY------------ 359
              +I+   ++RN        T   +G             G      ++            
Sbjct: 751  TVAISPRIINRNSKLNSICVTGIKTGVSSTDVCKNVCMKGQNAIKKMWDELDIETLRRLE 810

Query: 360  ----SINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
                 I+F +  + K+P G+  R   L K+N+K N L +LP ++     L  LNL  N  
Sbjct: 811  EDTSDIDFANRDLQKLP-GVIGRFAELKKLNLKSNHLDTLPEEVSNLTSLESLNLADNSF 869

Query: 416  SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF----- 470
                  + +L NL  L L++N L  +  S+ N+++   LD   N L ++PN +       
Sbjct: 870  ENYPSVLSHLENLVTLNLNHNKLTAMHISLVNIKE---LDASHNNLVAIPNTVSQASQLT 926

Query: 471  ------------LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
                        LK L+ L L  N+L S+P ++  L  L+ L + +N LQ IP++I  L+
Sbjct: 927  NKINDDPSITLDLKSLKVLRLTHNKLTSIP-SVDSLLELTVLDISDNKLQKIPKQIRILK 985

Query: 519  NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            NL  LYL++N  +  +P E+   + L  + + N  L  +P EI
Sbjct: 986  NLKELYLSNNE-IKTVPCEITHLTELHELDISNNELEHLPPEI 1027



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/371 (32%), Positives = 188/371 (50%), Gaps = 45/371 (12%)

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           + L+F ++ ++ P I    +   L++R N    LPPE+  LK L  L+L+ N +E +P  
Sbjct: 29  ISLQFMKLASLPPSIAEYKDCERLNLRCNSFSTLPPEISHLKKLNELNLSENCIENIPMS 88

Query: 258 IGNCTMLVTLDLQHNELVN--IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
           +   T L  L++  NE++    PD +  L+NL +L LS N +E +P T+     L E ++
Sbjct: 89  LYKLTALTVLNMNGNEIIGKLQPD-ISKLVNLQKLDLSVNNIEEIPRTILNLCALQELDL 147

Query: 316 EGCALSSLP--DGLLSSLTSINNITLSRNKFTAYP----------------------SGG 351
               LS++P   G L  LT +N   LS+N+ T  P                      S  
Sbjct: 148 HYNMLSTIPCEVGQLVHLTDLN---LSQNQLTELPITLGNLKRLQSLRVSDNKLLSVSME 204

Query: 352 PTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLG 411
                 + +++   N+I +IP  I  + K+L  +++  N LT+LP+D+G    L E+N+ 
Sbjct: 205 IGMLVELRTLDLSKNEIVEIPSSI-GKLKSLKMLHIDRNKLTNLPIDIGKLKNLQEINMS 263

Query: 412 TNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
            N+I    E I  LVNL+ L   NN LK LP S  NL KL+ +++  N +ESLP  IG L
Sbjct: 264 MNKILDFPESIGGLVNLQFLNAKNNQLKCLPVSFVNLSKLREVNVSNNYIESLPRSIGKL 323

Query: 472 KELQRLILQSNQLVSLPRAIGH--------------LTNLSYLSVGENNLQSIPEEIGTL 517
           K+L+ L +  N L SLP +IG               L  L+ L +  N ++ +P EIG L
Sbjct: 324 KDLKYLDISHNHLESLPPSIGECILVSKHVITCWKMLRELTSLKMMRNQIKVLPREIGYL 383

Query: 518 ENLHTLYLNDN 528
            +L TL ++DN
Sbjct: 384 SSLSTLVIDDN 394



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 141/540 (26%), Positives = 250/540 (46%), Gaps = 75/540 (13%)

Query: 98   CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            C    + +L+LS ++I  +PP +  L  L  + +  NK+ S+P +IG +  L  L ++ N
Sbjct: 556  CSASELYHLNLSCNNIEEIPPGICNLQRLAIIDVCENKIRSIPKEIGNMNRLKELHISNN 615

Query: 158  SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
             + ++P+ L  L++L +LD+R+N L ELP    +L  L+IL L  N      P I  L+ 
Sbjct: 616  KIGNIPEPLCKLRELTLLDIRNNNLKELPPQFGELHELQILQLSGNVFNEFPPAISKLTK 675

Query: 218  LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
            L  L +  N +  +P  +G LK+L  + +  N + ELP E+    ++    +++ +   +
Sbjct: 676  LVKLYLSGNNMTSIPSTIGRLKSLEEMSIDGNIITELPAELLELQIIKLQLIENQQDTPL 735

Query: 278  PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC------------------- 318
             D +     L+RL+ + + +   P  +++   LN   V G                    
Sbjct: 736  KDFVA---ELSRLKQNGSTVAISPRIINRNSKLNSICVTGIKTGVSSTDVCKNVCMKGQN 792

Query: 319  ALSSLPD----------------------------GLLSSLTSINNITLSRNKFTAYPSG 350
            A+  + D                            G++     +  + L  N     P  
Sbjct: 793  AIKKMWDELDIETLRRLEEDTSDIDFANRDLQKLPGVIGRFAELKKLNLKSNHLDTLPEE 852

Query: 351  GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              +  TS+ S+N   N  +  P  + S  +NL  +N+  N LT++ + L   V + EL+ 
Sbjct: 853  V-SNLTSLESLNLADNSFENYP-SVLSHLENLVTLNLNHNKLTAMHISL---VNIKELDA 907

Query: 411  GTN----------QISKLSEDIQ-------NLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
              N          Q S+L+  I        +L +L+VL L++N L  +P S+ +L +L  
Sbjct: 908  SHNNLVAIPNTVSQASQLTNKINDDPSITLDLKSLKVLRLTHNKLTSIP-SVDSLLELTV 966

Query: 454  LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
            LD+ +NKL+ +P +I  LK L+ L L +N++ ++P  I HLT L  L +  N L+ +P E
Sbjct: 967  LDISDNKLQKIPKQIRILKNLKELYLSNNEIKTVPCEITHLTELHELDISNNELEHLPPE 1026

Query: 514  IGTLENLHTLYLNDNTCLNNIPFELALCSNLQ-IMSLDNCPLSQIPSEIVVGGPSLIIRY 572
            I  + NL +LY+  N  L  +P  +    NL+ I +  N  + + P+++   G + II Y
Sbjct: 1027 IDNMTNLQSLYIQRNR-LMELPRTIVHIDNLKYIDASGNSSMREPPADVCDLGINKIIEY 1085



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 5/133 (3%)

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR 489
           +L ++ +LL   P      ++   + L+  KL SLP  I   K+ +RL L+ N   +LP 
Sbjct: 10  LLTVTMDLLTSFPD-----KQTTDISLQFMKLASLPPSIAEYKDCERLNLRCNSFSTLPP 64

Query: 490 AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
            I HL  L+ L++ EN +++IP  +  L  L  L +N N  +  +  +++   NLQ + L
Sbjct: 65  EISHLKKLNELNLSENCIENIPMSLYKLTALTVLNMNGNEIIGKLQPDISKLVNLQKLDL 124

Query: 550 DNCPLSQIPSEIV 562
               + +IP  I+
Sbjct: 125 SVNNIEEIPRTIL 137


>gi|421088203|ref|ZP_15549031.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003188|gb|EKO53634.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 401

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 124/358 (34%), Positives = 189/358 (52%), Gaps = 26/358 (7%)

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           + T L  +L N   +RVLDL   KL  LP  + +L +L++L L  N++ T+  +I  L N
Sbjct: 34  AYTDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQN 93

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N++   P E+G+LKNL TL L+ N L  LPKEIG    L  L L  N+    
Sbjct: 94  LQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAF 153

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  +G L NL +L L  N+L+++P  + +  +L E ++    L +L              
Sbjct: 154 PKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTL-------------- 199

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
                      S    Q  ++  ++   NQ+  +P  I  + KNL  +++ +N   ++P 
Sbjct: 200 -----------SAEIGQLQNLQVLDLNDNQLKTLPKEI-GQLKNLQMLDLNNNQFKTVPE 247

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++G    L  L+LG NQ   + E+I  L NL++L L+NN  K +P   G L+ L+ L L 
Sbjct: 248 EIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLN 307

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
            N+L +LPNEI  LK L+ L L  NQL +L   IG L NL  LS+ +N L+++P+EIG
Sbjct: 308 ANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEIG 365



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/345 (34%), Positives = 187/345 (54%), Gaps = 27/345 (7%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L + + K++ LP E+G+L+NL  L+L +N L  LPKEIG    L  L L  N+L  
Sbjct: 47  DVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTT 106

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
            P  +G L NL  L LS NRL ++P+ + +  +L E                        
Sbjct: 107 FPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRE------------------------ 142

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L+ N+FTA+P     Q  ++  +N   NQ+  +P  I  + +NL ++++  N L +L 
Sbjct: 143 LYLNTNQFTAFPK-EIGQLKNLQQLNLYANQLKTLPNEI-GQLQNLRELHLSYNQLKTLS 200

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  L+L  NQ+  L ++I  L NL++L L+NN  K +P  IG L+ L+ LDL
Sbjct: 201 AEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDL 260

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+ +++P EIG LK LQ L L +NQ  ++P   G L NL  LS+  N L ++P EI  
Sbjct: 261 GYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQ 320

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+NL  L+L+ N  L  +  E+    NL+ +SL +  L  +P EI
Sbjct: 321 LKNLRELHLSYNQ-LKTLSAEIGQLKNLKKLSLRDNQLKTLPKEI 364



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/341 (33%), Positives = 181/341 (53%), Gaps = 26/341 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + +L +L+ L L  N+LA+LP +IG + NL  L L+ N LT+ P  
Sbjct: 51  LDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L  N+L  LP  + +L +L+ LYL  N+      +I  L NL  L++  
Sbjct: 111 IGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYA 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+++ LP E+G+L+NL  L L++N L+ L  EIG    L  LDL  N+L  +P  +G L 
Sbjct: 171 NQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLK 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L+ N+ ++VPE + +  +L   ++      ++P+  +  L ++  + L+ N+F 
Sbjct: 231 NLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEE-IGQLKNLQMLFLNNNQFK 289

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P               E  Q+           KNL  +++  N LT+LP ++     L
Sbjct: 290 TVPE--------------ETGQL-----------KNLQMLSLNANQLTTLPNEIRQLKNL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
            EL+L  NQ+  LS +I  L NL+ L L +N LK LP  IG
Sbjct: 325 RELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEIG 365



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 174/300 (58%), Gaps = 3/300 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L+ + +  LP  + +L +L+EL+L GN+L + P +IG + NL  L L++N LT
Sbjct: 69  QNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLT 128

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ LR L L  N+    P  + +L +L+ L L  N++KT+  +I  L NL  
Sbjct: 129 TLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRE 188

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ L  E+G+L+NL  LDL  N L+ LPKEIG    L  LDL +N+   +P+ 
Sbjct: 189 LHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEE 248

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L YN+ ++VPE + +  +L    +      ++P+     L ++  ++L+
Sbjct: 249 IGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEE-TGQLKNLQMLSLN 307

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P+    Q  ++  ++  +NQ+  +   I  + KNL K++++DN L +LP ++G
Sbjct: 308 ANQLTTLPN-EIRQLKNLRELHLSYNQLKTLSAEI-GQLKNLKKLSLRDNQLKTLPKEIG 365



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/345 (32%), Positives = 181/345 (52%), Gaps = 26/345 (7%)

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
           ++  L L+E  L +LP  +  LQ L+VL+L +N+L  LP  + +L +L+ L+L  N++ T
Sbjct: 47  DVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTT 106

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
              +I  L NL  L +  N++  LP E+G+LKNL  L L  N     PKEIG    L  L
Sbjct: 107 FPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQL 166

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
           +L  N+L  +P+ +G L NL  L LSYN+L+++   + +  +L   ++    L +LP  +
Sbjct: 167 NLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEI 226

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
                                     Q  ++  ++  +NQ   +P  I  + KNL  +++
Sbjct: 227 -------------------------GQLKNLQMLDLNNNQFKTVPEEI-GQLKNLQVLDL 260

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
             N   ++P ++G    L  L L  NQ   + E+   L NL++L L+ N L  LP+ I  
Sbjct: 261 GYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQ 320

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L+ L+ L L  N+L++L  EIG LK L++L L+ NQL +LP+ IG
Sbjct: 321 LKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEIG 365



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 112/335 (33%), Positives = 173/335 (51%), Gaps = 26/335 (7%)

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           KL +LP +IG + NL  L L  N L +LP  +  LQ L+ L L  N+L   P  + +L +
Sbjct: 57  KLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKN 116

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L+ L L  NR+ T+  +I  L NL  L +  N+    P E+G+LKNL  L+L  N L+ L
Sbjct: 117 LQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTL 176

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P EIG    L  L L +N+L  +   +G L NL  L L+ N+L+++P+ + +        
Sbjct: 177 PNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQ-------- 228

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
                           L ++  + L+ N+F   P     Q  ++  ++  +NQ   +P  
Sbjct: 229 ----------------LKNLQMLDLNNNQFKTVPE-EIGQLKNLQVLDLGYNQFKTVPEE 271

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           I  + KNL  + + +N   ++P + G    L  L+L  NQ++ L  +I+ L NL  L LS
Sbjct: 272 I-GQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLS 330

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
            N LK L + IG L+ LK L L +N+L++LP EIG
Sbjct: 331 YNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEIG 365



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/146 (42%), Positives = 89/146 (60%), Gaps = 1/146 (0%)

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           + L++ ++N +++ VL LS   LK LP  IG L+ L+ L+L  N+L +LP EIG L+ LQ
Sbjct: 36  TDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQ 95

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
            L L  NQL + P+ IG L NL  L + +N L ++P+EIG L+NL  LYLN N      P
Sbjct: 96  ELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQ-FTAFP 154

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEI 561
            E+    NLQ ++L    L  +P+EI
Sbjct: 155 KEIGQLKNLQQLNLYANQLKTLPNEI 180


>gi|124003508|ref|ZP_01688357.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991077|gb|EAY30529.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 646

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 156/448 (34%), Positives = 234/448 (52%), Gaps = 11/448 (2%)

Query: 120 VEKLTHLEELY---LYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLD 176
            E L   E++Y   L  N+L +LP+ IG + NL  L L  N LT+LP S A LQ L  L+
Sbjct: 30  TEALKTPEQVYKLNLEHNQLTTLPANIGELKNLKKLNLEYNQLTTLPASFAKLQNLEELN 89

Query: 177 LRHNKLNELPMVVYKLTSLKILYLRFN-RIKTVHPDIQYLSNLSMLSMRDN-KIRELPPE 234
           L  NK   LP  V KL +L+ L L  N  +K +  +I+ L NL  L++  N  +++LP  
Sbjct: 90  LTRNKFTTLPASVTKLQNLEELNLTDNLSLKKLPDNIEQLKNLQKLNLTSNLSLKKLPEN 149

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
           + +LK L  L+L  +    LP  I     L  L +  + L  +P+    L NL  L L  
Sbjct: 150 ITQLKKLKVLNLNGSSRIILPANIQLPESLRILHMNDHLLTTLPENFSQLHNLKVLNLKS 209

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP-SGGPT 353
           + L ++P  + +  +L   N+    L+ LP   +  L S+  + L  N+ T  P S G  
Sbjct: 210 SGLVALPNNIGQLKNLTILNLRENYLTKLPTS-IGQLKSLEKLDLQGNQLTILPISIG-- 266

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q  S+  ++   NQ+  +P  I  + KNL ++ ++ N LTSL  D+G    L  LNL  N
Sbjct: 267 QLKSLKKLDLGANQLTTLPTSI-GQLKNLQQLFLEVNTLTSLLDDIGKLKQLKVLNLRRN 325

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           +++ L   I  L +L  L LS+N L +LP S G L+KL+ L+LE N  +++   +G LK 
Sbjct: 326 RLTTLPNSIGRLKSLRWLSLSSNKLTRLPKSFGQLKKLEELNLEGNYFQTMLTILGQLKS 385

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L++L L SN L +LP  IG L  L YL++  N L  +PE IG L+ L  L L  N  L+ 
Sbjct: 386 LKKLYLASNNLTTLPENIGQLPELQYLTLVRNKLDRLPESIGQLQELQYLDLRRNR-LST 444

Query: 534 IPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +P  L     L+ +++   PL  +P+ I
Sbjct: 445 LPESLGQLKKLEELNIGANPLVTLPNSI 472



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 152/440 (34%), Positives = 221/440 (50%), Gaps = 27/440 (6%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           +T LP +  +L +L+ L L  + L +LP+ IG + NLT L L EN LT LP S+  L+ L
Sbjct: 189 LTTLPENFSQLHNLKVLNLKSSGLVALPNNIGQLKNLTILNLRENYLTKLPTSIGQLKSL 248

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
             LDL+ N+L  LP+ + +L SLK L L  N++ T+   I  L NL  L +  N +  L 
Sbjct: 249 EKLDLQGNQLTILPISIGQLKSLKKLDLGANQLTTLPTSIGQLKNLQQLFLEVNTLTSLL 308

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            ++G+LK L  L+L  N L  LP  IG    L  L L  N+L  +P   G L  L  L L
Sbjct: 309 DDIGKLKQLKVLNLRRNRLTTLPNSIGRLKSLRWLSLSSNKLTRLPKSFGQLKKLEELNL 368

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
             N  +++   L +   L +  +    L++LP+  +  L  +  +TL RNK    P    
Sbjct: 369 EGNYFQTMLTILGQLKSLKKLYLASNNLTTLPEN-IGQLPELQYLTLVRNKLDRLPE-SI 426

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
            Q   +  ++   N++  +P  +  + K L ++N+  N L +LP  +G    L +L L T
Sbjct: 427 GQLQELQYLDLRRNRLSTLPESL-GQLKKLEELNIGANPLVTLPNSIGKLKNLKKLYLAT 485

Query: 413 -NQISKLSEDIQNLVNLEVLVLSNNLLKKLPS-----------------------SIGNL 448
            NQ  K    I  + +LE L L  N L  LP+                       SIG L
Sbjct: 486 ANQTPKSFASITQITSLEELYLLVNRLDTLPTSIQKLKNLKKLNLLYNQISIVPESIGKL 545

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
           + L+ L L  NKL  L   IG L+ + RL L SN+L +LP++IG L  L  L++  NNL+
Sbjct: 546 KNLQALILGNNKLTVLTQNIGQLESILRLDLSSNKLTTLPQSIGKLKKLKQLNLSYNNLK 605

Query: 509 SIPEEIGTLENLHTLYLNDN 528
           S+PE IG L+NL  L L  N
Sbjct: 606 SLPEHIGQLKNLKDLNLRKN 625



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 147/408 (36%), Positives = 215/408 (52%), Gaps = 25/408 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL  + +T LP S+ +L  L++L L  N+L +LP+ IG + NL  L L  N+LTSL D 
Sbjct: 251 LDLQGNQLTILPISIGQLKSLKKLDLGANQLTTLPTSIGQLKNLQQLFLEVNTLTSLLDD 310

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+QL+VL+LR N+L  LP  + +L SL+ L L  N++  +      L  L  L++  
Sbjct: 311 IGKLKQLKVLNLRRNRLTTLPNSIGRLKSLRWLSLSSNKLTRLPKSFGQLKKLEELNLEG 370

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N  + +   LG+LK+L  L LA N+L  LP+ IG    L  L L  N+L  +P+ +G L 
Sbjct: 371 NYFQTMLTILGQLKSLKKLYLASNNLTTLPENIGQLPELQYLTLVRNKLDRLPESIGQLQ 430

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L  NRL ++PE+L +   L E N+    L +LP+       SI  +   +  + 
Sbjct: 431 ELQYLDLRRNRLSTLPESLGQLKKLEELNIGANPLVTLPN-------SIGKLKNLKKLYL 483

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           A  +  P  F S+  I                   +L ++ +  N L +LP  +     L
Sbjct: 484 ATANQTPKSFASITQIT------------------SLEELYLLVNRLDTLPTSIQKLKNL 525

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            +LNL  NQIS + E I  L NL+ L+L NN L  L  +IG L  +  LDL  NKL +LP
Sbjct: 526 KKLNLLYNQISIVPESIGKLKNLQALILGNNKLTVLTQNIGQLESILRLDLSSNKLTTLP 585

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
             IG LK+L++L L  N L SLP  IG L NL  L++ +N + +  +E
Sbjct: 586 QSIGKLKKLKQLNLSYNNLKSLPEHIGQLKNLKDLNLRKNPISATEKE 633



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 132/403 (32%), Positives = 211/403 (52%), Gaps = 6/403 (1%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SL ++L   +Q+  L+L HN+L  LP  + +L +LK L L +N++ T+      L NL  
Sbjct: 28  SLTEALKTPEQVYKLNLEHNQLTTLPANIGELKNLKKLNLEYNQLTTLPASFAKLQNLEE 87

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHN-HLEELPKEIGNCTMLVTLDLQHN-ELVNIP 278
           L++  NK   LP  + +L+NL  L+L  N  L++LP  I     L  L+L  N  L  +P
Sbjct: 88  LNLTRNKFTTLPASVTKLQNLEELNLTDNLSLKKLPDNIEQLKNLQKLNLTSNLSLKKLP 147

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           + +  L  L  L L+ +    +P  +     L   ++    L++LP+   S L ++  + 
Sbjct: 148 ENITQLKKLKVLNLNGSSRIILPANIQLPESLRILHMNDHLLTTLPEN-FSQLHNLKVLN 206

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           L  +   A P+    Q  ++  +N   N + K+P  I  + K+L K++++ N LT LP+ 
Sbjct: 207 LKSSGLVALPN-NIGQLKNLTILNLRENYLTKLPTSI-GQLKSLEKLDLQGNQLTILPIS 264

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L +L+LG NQ++ L   I  L NL+ L L  N L  L   IG L++LK L+L  
Sbjct: 265 IGQLKSLKKLDLGANQLTTLPTSIGQLKNLQQLFLEVNTLTSLLDDIGKLKQLKVLNLRR 324

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L +LPN IG LK L+ L L SN+L  LP++ G L  L  L++  N  Q++   +G L+
Sbjct: 325 NRLTTLPNSIGRLKSLRWLSLSSNKLTRLPKSFGQLKKLEELNLEGNYFQTMLTILGQLK 384

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +L  LYL  N  L  +P  +     LQ ++L    L ++P  I
Sbjct: 385 SLKKLYLASNN-LTTLPENIGQLPELQYLTLVRNKLDRLPESI 426



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 1/110 (0%)

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+LE N+L +LP  IG LK L++L L+ NQL +LP +   L NL  L++  N   ++P  
Sbjct: 42  LNLEHNQLTTLPANIGELKNLKKLNLEYNQLTTLPASFAKLQNLEELNLTRNKFTTLPAS 101

Query: 514 IGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL-DNCPLSQIPSEIV 562
           +  L+NL  L L DN  L  +P  +    NLQ ++L  N  L ++P  I 
Sbjct: 102 VTKLQNLEELNLTDNLSLKKLPDNIEQLKNLQKLNLTSNLSLKKLPENIT 151


>gi|291232979|ref|XP_002736431.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 1196

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 240/483 (49%), Gaps = 33/483 (6%)

Query: 84  PIQADLNIEKEFLR------CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLA 137
           P   ++N+ K  LR          N+    L+ + +T LP  + +L  L+++ L  NK  
Sbjct: 75  PTDEEINLNKRSLRKLPTSISGFPNLRKCKLANNYLTFLPTELSELKRLKKIELQSNKFD 134

Query: 138 SLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL--------------- 182
            +P  I  +  L  L +A+N LTS+  S+ NL+QLR L+L  NKL               
Sbjct: 135 QMPVPIFKLHKLHKLNMADNHLTSINQSITNLKQLRKLNLSGNKLINIDYITTLLKLEEL 194

Query: 183 ----NE---LPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
               NE   LP  +  ++ L +LYL  N + T+  DI+ L  L  + +  N+I   PP L
Sbjct: 195 HLSNNEIQSLPASIGDMSDLTVLYLDKNNLTTLPSDIKKLHQLERIDVSSNQIEIFPPGL 254

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
            EL  + +L LA+N++  +P +I N + L+ LDL++N++ NIP  L +L  L  L L+ N
Sbjct: 255 CELNEVTSLRLANNNISLIPPDIANLSELLVLDLEYNQIANIPPALCDLKQLVELTLNIN 314

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
           +L  +P  + K V L    +    L+ +P  L   +  +  +TL  N  +A PS      
Sbjct: 315 KLTCIPSDIKKLVRLQTLGLSDNQLNEIPPAL-CDMPKLTKLTLDGNGLSAIPSA-IRNL 372

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
            ++  ++  +N I  IP  +      L ++ +  N L  +P ++G    L +L+L  N+ 
Sbjct: 373 RNLQKLDLSNNNISVIPSELL-HMNQLIELRLGSNQLKCIPSEIGNLQQLEKLDLSHNEG 431

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
              ++ + +L  L  L L+ N L+ +P+ +  L+KL+ L + +N ++ +P EI  L  L+
Sbjct: 432 ISGADSLSSLDELSELKLNKNNLRSVPN-MFKLKKLQVLHMNDNLIKEIPEEIQNLYSLK 490

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
            L L  NQL S+P  IG LTNL  LS+  N L  I   IG L  L  L L  N  L  +P
Sbjct: 491 ELWLDYNQLTSIPSEIGELTNLRELSLLMNKLTEITPAIGKLSMLRHLNLEYNK-LKTLP 549

Query: 536 FEL 538
            E+
Sbjct: 550 EEV 552



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 134/400 (33%), Positives = 211/400 (52%), Gaps = 31/400 (7%)

Query: 120 VEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRH 179
           +  L  LEEL+L  N++ SLP+ IG +++LT L L +N+LT+LP  +  L QL  +D+  
Sbjct: 185 ITTLLKLEELHLSNNEIQSLPASIGDMSDLTVLYLDKNNLTTLPSDIKKLHQLERIDVSS 244

Query: 180 NKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELK 239
           N++   P  + +L  +  L L  N I  + PDI  LS L +L +  N+I  +PP L +LK
Sbjct: 245 NQIEIFPPGLCELNEVTSLRLANNNISLIPPDIANLSELLVLDLEYNQIANIPPALCDLK 304

Query: 240 NLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLES 299
            LV L L  N L  +P +I     L TL L  N+L  IP  L ++  LT+L L  N L +
Sbjct: 305 QLVELTLNINKLTCIPSDIKKLVRLQTLGLSDNQLNEIPPALCDMPKLTKLTLDGNGLSA 364

Query: 300 VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTS 357
           +P  +    +L + ++    +S +P  LL  +  +  + L  N+    PS  G   Q   
Sbjct: 365 IPSAIRNLRNLQKLDLSNNNISVIPSELL-HMNQLIELRLGSNQLKCIPSEIGNLQQLE- 422

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
              ++  HN+      GI S A +LS ++                  L+EL L  N +  
Sbjct: 423 --KLDLSHNE------GI-SGADSLSSLD-----------------ELSELKLNKNNLRS 456

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           +  ++  L  L+VL +++NL+K++P  I NL  LK L L+ N+L S+P+EIG L  L+ L
Sbjct: 457 VP-NMFKLKKLQVLHMNDNLIKEIPEEIQNLYSLKELWLDYNQLTSIPSEIGELTNLREL 515

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
            L  N+L  +  AIG L+ L +L++  N L+++PEE+  L
Sbjct: 516 SLLMNKLTEITPAIGKLSMLRHLNLEYNKLKTLPEEVNNL 555



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 206/428 (48%), Gaps = 20/428 (4%)

Query: 114 THLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLR 173
           T  P S+ ++      Y +        S+  ++ N  C  L      S     A L  + 
Sbjct: 9   TSKPGSLRRVLRCVHFYAFHADANRKRSKAVWLVNRRCGTLERKFFFSHFHGTAFLSGMD 68

Query: 174 VL----------DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           +L          +L    L +LP  +    +L+   L  N +  +  ++  L  L  + +
Sbjct: 69  ILRWSNPTDEEINLNKRSLRKLPTSISGFPNLRKCKLANNYLTFLPTELSELKRLKKIEL 128

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
           + NK  ++P  + +L  L  L++A NHL  + + I N   L  L+L  N+L+NI D +  
Sbjct: 129 QSNKFDQMPVPIFKLHKLHKLNMADNHLTSINQSITNLKQLRKLNLSGNKLINI-DYITT 187

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L+ L  L LS N ++S+P ++     L    ++   L++LP  +   L  +  I +S N+
Sbjct: 188 LLKLEELHLSNNEIQSLPASIGDMSDLTVLYLDKNNLTTLPSDI-KKLHQLERIDVSSNQ 246

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV---NMKDNLLTSLPLDLG 400
              +P G   +   V S+   +N I  IP  I     NLS++   +++ N + ++P  L 
Sbjct: 247 IEIFPPG-LCELNEVTSLRLANNNISLIPPDI----ANLSELLVLDLEYNQIANIPPALC 301

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L EL L  N+++ +  DI+ LV L+ L LS+N L ++P ++ ++ KL  L L+ N 
Sbjct: 302 DLKQLVELTLNINKLTCIPSDIKKLVRLQTLGLSDNQLNEIPPALCDMPKLTKLTLDGNG 361

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L ++P+ I  L+ LQ+L L +N +  +P  + H+  L  L +G N L+ IP EIG L+ L
Sbjct: 362 LSAIPSAIRNLRNLQKLDLSNNNISVIPSELLHMNQLIELRLGSNQLKCIPSEIGNLQQL 421

Query: 521 HTLYLNDN 528
             L L+ N
Sbjct: 422 EKLDLSHN 429



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 161/337 (47%), Gaps = 32/337 (9%)

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           +R+LP  +    NL    LA+N+L  LP E+     L  ++LQ N+   +P  +  L  L
Sbjct: 87  LRKLPTSISGFPNLRKCKLANNYLTFLPTELSELKRLKKIELQSNKFDQMPVPIFKLHKL 146

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            +L ++ N L S+ ++++    L + N+ G  L ++    +++L  +  + LS N+  + 
Sbjct: 147 HKLNMADNHLTSINQSITNLKQLRKLNLSGNKLINI--DYITTLLKLEELHLSNNEIQSL 204

Query: 348 PS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           P+  G  +  T +Y        +DK                   N LT+LP D+     L
Sbjct: 205 PASIGDMSDLTVLY--------LDK-------------------NNLTTLPSDIKKLHQL 237

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             +++ +NQI      +  L  +  L L+NN +  +P  I NL +L  LDLE N++ ++P
Sbjct: 238 ERIDVSSNQIEIFPPGLCELNEVTSLRLANNNISLIPPDIANLSELLVLDLEYNQIANIP 297

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
             +  LK+L  L L  N+L  +P  I  L  L  L + +N L  IP  +  +  L  L L
Sbjct: 298 PALCDLKQLVELTLNINKLTCIPSDIKKLVRLQTLGLSDNQLNEIPPALCDMPKLTKLTL 357

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           + N  L+ IP  +    NLQ + L N  +S IPSE++
Sbjct: 358 DGNG-LSAIPSAIRNLRNLQKLDLSNNNISVIPSELL 393


>gi|327403779|ref|YP_004344617.1| adenylate cyclase [Fluviicola taffensis DSM 16823]
 gi|327319287|gb|AEA43779.1| Adenylate cyclase [Fluviicola taffensis DSM 16823]
          Length = 575

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 153/497 (30%), Positives = 245/497 (49%), Gaps = 42/497 (8%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++  L L+  SI + P S+  + +LEEL+L  N +  +P +I  + NL  L L  NSL +
Sbjct: 45  DVYKLFLNSQSIKNFPISILSMKNLEELHLSSNLIPVIPEEIDKLENLKFLDLKGNSLDN 104

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP S  NL +L  L +  NK  ELP  +  L  L+IL +R N+I ++    +  + LSML
Sbjct: 105 LPASFRNLNKLEHLSIETNKFKELPDELSLLKKLRILKIRENQIHSLPEFREGFTALSML 164

Query: 222 SMRD----------------NKIRELPP-----------------ELGELKNLVTLDLAH 248
            + D                 K +E P                  +      L TL+L++
Sbjct: 165 YIDDINLSSDWQKYKVYTNLKKAKESPSIVYHLDLSVQFTLPRPLDFSSFTELKTLNLSY 224

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
             L+E P  I   T L  L L  N  +++P  +  L +L  L  S N L ++P+ + +  
Sbjct: 225 CDLKEFPMSIMTLTHLEYLHLGRNNFLSVPAEIAQLSHLKYLDFSENNLTTIPQEIGRLS 284

Query: 309 HLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEH 365
            L E N+    +  L +  G LS LT +N   L++N F   P+  G  +      I F +
Sbjct: 285 DLKELNLAFNQIKELSENLGELSKLTKLN---LTKNAFQQLPNAIGQLKLLEELHIGF-N 340

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           + + KIP  I     +L ++ +  + L SLP  +G    L  L++  N+I  L E   +L
Sbjct: 341 DFLTKIPESI-GDLSHLRRLTVPKSGLISLPESIGKLNQLELLSMFNNRIRVLPESFGDL 399

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
            +L+ L +  N L +LP S GNLR LK LDL EN+L +LP  I +++ L  L+L +N+L 
Sbjct: 400 ESLKYLRIHKNKLTQLPDSFGNLRLLKELDLSENRLTTLPASIEYMENLTILVLDNNELT 459

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
           +LP +IG L  L+ LS   N ++++P  +G L+NL  L L+ N  +  +P  +   S+L 
Sbjct: 460 TLPFSIGQLECLTSLSAYINTIKTLPSSLGKLKNLENLNLSYNN-IQKLPRSIRHLSSLF 518

Query: 546 IMSLDNCPLSQIPSEIV 562
           ++ + +   S+ P  I 
Sbjct: 519 VLDISDNKFSRFPKVIF 535



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 142/472 (30%), Positives = 223/472 (47%), Gaps = 43/472 (9%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  LDL  +S+ +LP S   L  LE L +  NK   LP ++  +  L  L + EN 
Sbjct: 88  KLENLKFLDLKGNSLDNLPASFRNLNKLEHLSIETNKFKELPDELSLLKKLRILKIRENQ 147

Query: 159 LTSLPDSLANLQQLRVL---------DLRHNKL-------NELPMVVYKL---------- 192
           + SLP+       L +L         D +  K+        E P +VY L          
Sbjct: 148 IHSLPEFREGFTALSMLYIDDINLSSDWQKYKVYTNLKKAKESPSIVYHLDLSVQFTLPR 207

Query: 193 -------TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
                  T LK L L +  +K     I  L++L  L +  N    +P E+ +L +L  LD
Sbjct: 208 PLDFSSFTELKTLNLSYCDLKEFPMSIMTLTHLEYLHLGRNNFLSVPAEIAQLSHLKYLD 267

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
            + N+L  +P+EIG  + L  L+L  N++  + + LG L  LT+L L+ N  + +P  + 
Sbjct: 268 FSENNLTTIPQEIGRLSDLKELNLAFNQIKELSENLGELSKLTKLNLTKNAFQQLPNAIG 327

Query: 306 KCVHLNEFNVE-GCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSIN 362
           +   L E ++     L+ +P+  +  L+ +  +T+ ++   + P   G   Q   +   N
Sbjct: 328 QLKLLEELHIGFNDFLTKIPES-IGDLSHLRRLTVPKSGLISLPESIGKLNQLELLSMFN 386

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
              N+I  +P   F   ++L  + +  N LT LP   G    L EL+L  N+++ L   I
Sbjct: 387 ---NRIRVLPES-FGDLESLKYLRIHKNKLTQLPDSFGNLRLLKELDLSENRLTTLPASI 442

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
           + + NL +LVL NN L  LP SIG L  L  L    N +++LP+ +G LK L+ L L  N
Sbjct: 443 EYMENLTILVLDNNELTTLPFSIGQLECLTSLSAYINTIKTLPSSLGKLKNLENLNLSYN 502

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL--NDNTCLN 532
            +  LPR+I HL++L  L + +N     P+ I  L  L    L  NDN  +N
Sbjct: 503 NIQKLPRSIRHLSSLFVLDISDNKFSRFPKVIFRLHQLKKCNLEENDNLFMN 554



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 205/455 (45%), Gaps = 40/455 (8%)

Query: 143 IGYVTNLTCLGLAE--NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           I  + +    GLA+       L ++  N   +  L L    +   P+ +  + +L+ L+L
Sbjct: 15  ILLIFSFRAQGLAQPDKIFFDLEEAARNPSDVYKLFLNSQSIKNFPISILSMKNLEELHL 74

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
             N I  +  +I  L NL  L ++ N +  LP     L  L  L +  N  +ELP E+  
Sbjct: 75  SSNLIPVIPEEIDKLENLKFLDLKGNSLDNLPASFRNLNKLEHLSIETNKFKELPDELSL 134

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS-------------YNRLESVPETLSKC 307
              L  L ++ N++ ++P+       L+ L +              Y  L+   E+ S  
Sbjct: 135 LKKLRILKIRENQIHSLPEFREGFTALSMLYIDDINLSSDWQKYKVYTNLKKAKESPSIV 194

Query: 308 VHLN--------------------EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            HL+                      N+  C L   P  ++ +LT +  + L RN F + 
Sbjct: 195 YHLDLSVQFTLPRPLDFSSFTELKTLNLSYCDLKEFPMSIM-TLTHLEYLHLGRNNFLSV 253

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
           P     Q + +  ++F  N +  IP  I  R  +L ++N+  N +  L  +LG    LT+
Sbjct: 254 P-AEIAQLSHLKYLDFSENNLTTIPQEI-GRLSDLKELNLAFNQIKELSENLGELSKLTK 311

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
           LNL  N   +L   I  L  LE L +  N+ L K+P SIG+L  L+ L + ++ L SLP 
Sbjct: 312 LNLTKNAFQQLPNAIGQLKLLEELHIGFNDFLTKIPESIGDLSHLRRLTVPKSGLISLPE 371

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            IG L +L+ L + +N++  LP + G L +L YL + +N L  +P+  G L  L  L L+
Sbjct: 372 SIGKLNQLELLSMFNNRIRVLPESFGDLESLKYLRIHKNKLTQLPDSFGNLRLLKELDLS 431

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +N  L  +P  +    NL I+ LDN  L+ +P  I
Sbjct: 432 ENR-LTTLPASIEYMENLTILVLDNNELTTLPFSI 465



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 12/209 (5%)

Query: 367 QIDKIPYGIFSRAKNLS---KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
           Q DKI + +   A+N S   K+ +    + + P+ + +   L EL+L +N I  + E+I 
Sbjct: 28  QPDKIFFDLEEAARNPSDVYKLFLNSQSIKNFPISILSMKNLEELHLSSNLIPVIPEEID 87

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
            L NL+ L L  N L  LP+S  NL KL+ L +E NK + LP+E+  LK+L+ L ++ NQ
Sbjct: 88  KLENLKFLDLKGNSLDNLPASFRNLNKLEHLSIETNKFKELPDELSLLKKLRILKIRENQ 147

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH-------TLYLNDNTCLNNIPF 536
           + SLP      T LS L + + NL S  ++     NL         +Y  D +    +P 
Sbjct: 148 IHSLPEFREGFTALSMLYIDDINLSSDWQKYKVYTNLKKAKESPSIVYHLDLSVQFTLPR 207

Query: 537 ELALCS--NLQIMSLDNCPLSQIPSEIVV 563
            L   S   L+ ++L  C L + P  I+ 
Sbjct: 208 PLDFSSFTELKTLNLSYCDLKEFPMSIMT 236


>gi|428311014|ref|YP_007121991.1| hypothetical protein Mic7113_2802 [Microcoleus sp. PCC 7113]
 gi|428252626|gb|AFZ18585.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
          Length = 348

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 120/333 (36%), Positives = 190/333 (57%), Gaps = 25/333 (7%)

Query: 264 LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSL 323
           + +LDL +++L  +P  +GNL +LTRL L  N+L  +P  + +  +L E ++ G  L +L
Sbjct: 18  VTSLDLHNHQLTTLPAEIGNLTHLTRLSLYGNQLGMLPPEIGQLTNLKELDLSGNQLKAL 77

Query: 324 PDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
           P+ +  +LT++ ++ L  N+ TA P       T++  ++ + NQ+  +P  I  +  NL+
Sbjct: 78  PEEI-GNLTNLTDLCLDNNQLTALPKE-IGNLTNLTGLSLDSNQLTALPEEI-GKLINLT 134

Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
           ++++  N LT LP ++G    L  L+   NQ+  L ++I N +NL  L L NN L++LP 
Sbjct: 135 RLSLYSNRLTGLPKEIGNLTHLNRLSCDNNQLMTLPKEIGNFINLTGLSLDNNQLRELPQ 194

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
            IGNL  L  L ++ NKL SLP EIG L  L +L L +N+L  L + IG+LT+L+ L++ 
Sbjct: 195 DIGNLTNLTRLSIDNNKLTSLPKEIGNLTNLTQLSLDNNKLTELLKEIGNLTHLTALAID 254

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDN------TCLNN----------------IPFELALC 541
            N L+S+PEE+G L NL TL L  N      T + N                +P E+ + 
Sbjct: 255 SNQLKSLPEEMGQLINLTTLSLYKNQLSSLPTAIGNLTHLTKLSLYSNQLTALPKEIGIL 314

Query: 542 SNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
           +NL  +SLDN PL+  PSEI+  G   I+ YL+
Sbjct: 315 TNLTSLSLDNNPLTSPPSEIIQQGTQAILAYLR 347



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/351 (35%), Positives = 187/351 (53%), Gaps = 30/351 (8%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE 156
           +   + + +LDL    +T LP  +  LTHL  L LYGN+L  LP +IG +TNL  L L+ 
Sbjct: 12  QAANDKVTSLDLHNHQLTTLPAEIGNLTHLTRLSLYGNQLGMLPPEIGQLTNLKELDLSG 71

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N L +LP+ + NL  L  L L +N+L  LP                        +I  L+
Sbjct: 72  NQLKALPEEIGNLTNLTDLCLDNNQLTALP-----------------------KEIGNLT 108

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           NL+ LS+  N++  LP E+G+L NL  L L  N L  LPKEIGN T L  L   +N+L+ 
Sbjct: 109 NLTGLSLDSNQLTALPEEIGKLINLTRLSLYSNRLTGLPKEIGNLTHLNRLSCDNNQLMT 168

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +GN INLT L L  N+L  +P+ +    +L   +++   L+SLP   + +LT++  
Sbjct: 169 LPKEIGNFINLTGLSLDNNQLRELPQDIGNLTNLTRLSIDNNKLTSLPKE-IGNLTNLTQ 227

Query: 337 ITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
           ++L  NK T      G  T  T++     + NQ+  +P  +  +  NL+ +++  N L+S
Sbjct: 228 LSLDNNKLTELLKEIGNLTHLTALA---IDSNQLKSLPEEM-GQLINLTTLSLYKNQLSS 283

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           LP  +G    LT+L+L +NQ++ L ++I  L NL  L L NN L   PS I
Sbjct: 284 LPTAIGNLTHLTKLSLYSNQLTALPKEIGILTNLTSLSLDNNPLTSPPSEI 334



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/278 (36%), Positives = 159/278 (57%), Gaps = 2/278 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS + +  LP  +  LT+L +L L  N+L +LP +IG +TNLT L L  N LT+
Sbjct: 63  NLKELDLSGNQLKALPEEIGNLTNLTDLCLDNNQLTALPKEIGNLTNLTGLSLDSNQLTA 122

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP+ +  L  L  L L  N+L  LP  +  LT L  L    N++ T+  +I    NL+ L
Sbjct: 123 LPEEIGKLINLTRLSLYSNRLTGLPKEIGNLTHLNRLSCDNNQLMTLPKEIGNFINLTGL 182

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           S+ +N++RELP ++G L NL  L + +N L  LPKEIGN T L  L L +N+L  +   +
Sbjct: 183 SLDNNQLRELPQDIGNLTNLTRLSIDNNKLTSLPKEIGNLTNLTQLSLDNNKLTELLKEI 242

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           GNL +LT L +  N+L+S+PE + + ++L   ++    LSSLP   + +LT +  ++L  
Sbjct: 243 GNLTHLTALAIDSNQLKSLPEEMGQLINLTTLSLYKNQLSSLPTA-IGNLTHLTKLSLYS 301

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           N+ TA P       T++ S++ ++N +   P  I  + 
Sbjct: 302 NQLTALPKEIGI-LTNLTSLSLDNNPLTSPPSEIIQQG 338



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L +  + +  LP  + +L +L  L LY N+L+SLP+ IG +T+LT L L  N LT+LP  
Sbjct: 251 LAIDSNQLKSLPEEMGQLINLTTLSLYKNQLSSLPTAIGNLTHLTKLSLYSNQLTALPKE 310

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL-YLR 201
           +  L  L  L L +N L   P  + +  +  IL YLR
Sbjct: 311 IGILTNLTSLSLDNNPLTSPPSEIIQQGTQAILAYLR 347


>gi|405966144|gb|EKC31462.1| hypothetical protein CGI_10021564 [Crassostrea gigas]
          Length = 717

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 246/531 (46%), Gaps = 59/531 (11%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E++  L +S + +T +PP +  L  +  L L  N++  LP  IG +T L  LGL  N+L 
Sbjct: 155 EHLRELVVSDNRLTAVPPQIRDLLEITHLVLNDNQITVLPDSIGELTTLQVLGLERNALE 214

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L   +  ++QL+ L L  N L  LP  +   + L+ L L  N  + +   + ++  L M
Sbjct: 215 FLNPEVCKIEQLKRLGLSGNSLRNLPREIENFSCLEELLLDDNEFEFIPVQVFWMETLQM 274

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L+M  N++  + P++G L  L  + L +N +EE+P+E      L  + L++N++  IPD 
Sbjct: 275 LTMSGNRLTSIQPDIGRLTQLTVIGLNNNLIEEIPEEFFQLEALEVVGLENNKIKAIPDN 334

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           + NL  L  L L  N +E VPE L  C +L   ++   ++S LP   + +L  I+ + LS
Sbjct: 335 IANLYELRELYLGRNSIEHVPENLCWCSNLEVLSLLNNSISVLPVE-VENLRRIHTLILS 393

Query: 341 RNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
            NKF   P   G  +   ++    + N++  +P   F   K L ++++  N  +  PL +
Sbjct: 394 NNKFEFLPEAIGLIRDLEIFFA--DGNKLSYVPVD-FGTLKRLRQIDLSSNKFSIFPLPI 450

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
                +  L L  N+I  +  +I NL  L  L L+NN +      + +L +L  LD   N
Sbjct: 451 CNLKTVESLKLSKNEIESIPAEIANLDRLSSLYLNNNKIHTFAPELCSLIQLHILDFSNN 510

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAI---------------GH----------L 494
            +E +P+ I  ++ L  L L  N+ +  P+ +               GH           
Sbjct: 511 YVEDIPDAISQMENLTDLDLSHNRFLEFPKTVVGIPRLERLKFDQAEGHPVPGLPDEIEF 570

Query: 495 TNLSYLSVGENNLQSIPE----------------EIGTLEN-------LHTLYLNDNTCL 531
           +N+SYL V  N L+++P                 EIG L +       L  L+LNDN  L
Sbjct: 571 SNVSYLIVSNNTLRTLPSTMSGMKNIISIIADHNEIGELPDSFCRLRRLQVLHLNDNK-L 629

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGG-----PSLIIRYLKMQG 577
           +++P       NL+ + L N PL   P ++ V G        I R L+ +G
Sbjct: 630 SSLPENFDHLRNLKDLRLHNNPLRTPPMDVCVSGVVQPIGRFIRRALEREG 680



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 144/457 (31%), Positives = 225/457 (49%), Gaps = 33/457 (7%)

Query: 131 LYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVY 190
           L G++L   P  I  + N+T L L+ N LT +P  ++NL  L+ LDL HNKL+ L   +Y
Sbjct: 70  LRGHRLKECPQAILSMENITYLCLSNNKLTEIPKEISNLCNLQELDLSHNKLSTLTRGIY 129

Query: 191 KLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
            LT L  L +  N +  +  +I  L +L  L + DN++  +PP++ +L  +  L L  N 
Sbjct: 130 LLTELTFLDVSNNEVSEILSEISGLEHLRELVVSDNRLTAVPPQIRDLLEITHLVLNDNQ 189

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           +  LP  IG  T L  L L+ N L  +   +  +  L RL LS N L ++P  +     L
Sbjct: 190 ITVLPDSIGELTTLQVLGLERNALEFLNPEVCKIEQLKRLGLSGNSLRNLPREIENFSCL 249

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY-PSGGPTQFTSVYSINFEHNQID 369
            E  ++      +P  +   + ++  +T+S N+ T+  P  G  + T +  I   +N I+
Sbjct: 250 EELLLDDNEFEFIPVQVF-WMETLQMLTMSGNRLTSIQPDIG--RLTQLTVIGLNNNLIE 306

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
           +IP   F + + L  V +++N + ++P ++     L EL LG N I  + E++    NLE
Sbjct: 307 EIPEEFF-QLEALEVVGLENNKIKAIPDNIANLYELRELYLGRNSIEHVPENLCWCSNLE 365

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF------------------- 470
           VL L NN +  LP  + NLR++  L L  NK E LP  IG                    
Sbjct: 366 VLSLLNNSISVLPVEVENLRRIHTLILSNNKFEFLPEAIGLIRDLEIFFADGNKLSYVPV 425

Query: 471 ----LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
               LK L+++ L SN+    P  I +L  +  L + +N ++SIP EI  L+ L +LYLN
Sbjct: 426 DFGTLKRLRQIDLSSNKFSIFPLPICNLKTVESLKLSKNEIESIPAEIANLDRLSSLYLN 485

Query: 527 DNTCLNNIPFELALCSNLQIMSLD--NCPLSQIPSEI 561
           +N      P    LCS +Q+  LD  N  +  IP  I
Sbjct: 486 NNKIHTFAP---ELCSLIQLHILDFSNNYVEDIPDAI 519


>gi|431908903|gb|ELK12494.1| Leucine-rich repeat and death domain-containing protein LOC401387
           [Pteropus alecto]
          Length = 827

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 141/479 (29%), Positives = 242/479 (50%), Gaps = 30/479 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++S + I+H+P  + +L ++ +L+L  N + + PS +  + NL  L LA+N+L  +P++
Sbjct: 221 LNVSHNQISHIPKEISQLRNIRQLFLNNNYIENFPSGLESLRNLEILSLAKNNLRYIPNT 280

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L  L+ L VL+L +N+L   P V+  L  L  L L  N I ++  +I+ L NL  L M  
Sbjct: 281 LCILKNLSVLNLEYNQLTIFPKVLCFLPKLISLNLTGNLISSLPKEIRELKNLEKLLMDH 340

Query: 226 NKIRELPPELGEL-----------------------KNLVTLDLAHNHLEELPKEIGNCT 262
           NK+  LP E+  L                       K L  L L  N L+E+P++I +C 
Sbjct: 341 NKLTFLPVEIFRLLKMQELQLTDNKIEVISHKIENFKELRILILDKNLLKEIPEKISHCV 400

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           ML  L L  N+L  +P  +  L +L +L ++ N +  +PE +S   ++      G  ++ 
Sbjct: 401 MLECLSLSDNKLTELPKNIHKLKSLRKLHVNRNNIVRIPEDISYLNNMFSLEFSGNIITD 460

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P   + +   I  + LS NK   +P  G     S++ +N   N I ++P  I S +K L
Sbjct: 461 VPIE-IKNCRKITKVKLSYNKIIHFPV-GLCALDSLHYLNINGNYISEVPVDI-SFSKQL 517

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             +   +N L      L + + L  L+LG NQI K+   I N+ +L VL+L  N  +  P
Sbjct: 518 LHLEFNENKLLIFSEHLCSLIKLQYLDLGKNQIRKIPACISNMASLHVLILCCNKFETFP 577

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
             +  L  L+ LD  EN+++ +P+EI  LK +Q+L + +NQ +  P  +  L +L  L++
Sbjct: 578 IDVCTLANLQVLDFSENQIKKIPSEICNLKGIQKLNISNNQFIYFPIELCQLQSLEELNI 637

Query: 503 GENN---LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            + N   L  +PEE+  +  L  L +++N  +  IP  +    +L  ++  N  +S +P
Sbjct: 638 SQINGTKLTRLPEELFNMTQLKRLDISNNA-IREIPRNIGELKSLVSLNAYNNQISYLP 695



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 240/481 (49%), Gaps = 8/481 (1%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C  +N+  L+L  + +T  P  +  L  L  L L GN ++SLP +I  + NL  L +  N
Sbjct: 282 CILKNLSVLNLEYNQLTIFPKVLCFLPKLISLNLTGNLISSLPKEIRELKNLEKLLMDHN 341

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            LT LP  +  L +++ L L  NK+  +   +     L+IL L  N +K +   I +   
Sbjct: 342 KLTFLPVEIFRLLKMQELQLTDNKIEVISHKIENFKELRILILDKNLLKEIPEKISHCVM 401

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  LS+ DNK+ ELP  + +LK+L  L +  N++  +P++I     + +L+   N + ++
Sbjct: 402 LECLSLSDNKLTELPKNIHKLKSLRKLHVNRNNIVRIPEDISYLNNMFSLEFSGNIITDV 461

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  + N   +T+++LSYN++   P  L     L+  N+ G  +S +P   +S    + ++
Sbjct: 462 PIEIKNCRKITKVKLSYNKIIHFPVGLCALDSLHYLNINGNYISEVPVD-ISFSKQLLHL 520

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
             + NK   + S        +  ++   NQI KIP  I S   +L  + +  N   + P+
Sbjct: 521 EFNENKLLIF-SEHLCSLIKLQYLDLGKNQIRKIPACI-SNMASLHVLILCCNKFETFPI 578

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           D+ T   L  L+   NQI K+  +I NL  ++ L +SNN     P  +  L+ L+ L++ 
Sbjct: 579 DVCTLANLQVLDFSENQIKKIPSEICNLKGIQKLNISNNQFIYFPIELCQLQSLEELNIS 638

Query: 458 E---NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           +    KL  LP E+  + +L+RL + +N +  +PR IG L +L  L+   N +  +P   
Sbjct: 639 QINGTKLTRLPEELFNMTQLKRLDISNNAIREIPRNIGELKSLVSLNAYNNQISYLPPSF 698

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGP-SLIIRYL 573
            +L +L  L L+ N  L  +P  +    +L+ ++ D+ PL + P EI  G     I RYL
Sbjct: 699 LSLNDLQQLNLSGNN-LTALPSGIYNLFSLKDINFDDNPLLRPPMEICKGKQLYTIARYL 757

Query: 574 K 574
           +
Sbjct: 758 Q 758



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 6/152 (3%)

Query: 417 KLSEDIQNLVNLEVLVLSNNL----LKKLPSSIGNLRKLKCLDLEENKLESLPN-EIGFL 471
           +L+E+ Q  V+L +   + NL    L++ P  I  ++ +K L L+EN+++S    E   L
Sbjct: 133 QLTEENQKGVDLGLDNFTVNLKAKGLQEFPKDILKIKYVKYLYLDENQIKSFEGAESCDL 192

Query: 472 KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
             L+ L LQ N L + P  I  L NL  L+V  N +  IP+EI  L N+  L+LN+N  +
Sbjct: 193 TGLEILSLQDNGLSTFPSEIQLLHNLKILNVSHNQISHIPKEISQLRNIRQLFLNNNY-I 251

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEIVV 563
            N P  L    NL+I+SL    L  IP+ + +
Sbjct: 252 ENFPSGLESLRNLEILSLAKNNLRYIPNTLCI 283


>gi|418727611|ref|ZP_13286199.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958969|gb|EKO22746.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 379

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 118/313 (37%), Positives = 180/313 (57%), Gaps = 4/313 (1%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLDL+ N  + LPKEIG    L  L+L  N+L  +P  +G L NL +L LS N+++++P+
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + K   L    +    L++LP  +   L  +  + L +N+ T  P     Q  ++ S+N
Sbjct: 112 EIEKLQKLQSLYLPNNQLTTLPQEI-GQLQKLQWLYLPKNQLTTLPQE-IGQLKNLKSLN 169

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQI  IP  I  + + L  + + +N LT+LP ++G    L  L+L TN+++ L ++I
Sbjct: 170 LSYNQIKTIPKKI-EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 228

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            +L NL+ L L +N L  LP+ IG L+ L+ L+L  N+L +L  EI  L+ L+ L L SN
Sbjct: 229 GHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLGSN 288

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL + P+ IG L NL  L +G N L ++PE IG L+NL TL L+ N  L  +P E+    
Sbjct: 289 QLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQ-LTTLPQEIGQLQ 347

Query: 543 NLQIMSLDNCPLS 555
           NLQ + L+N  LS
Sbjct: 348 NLQELFLNNNQLS 360



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/310 (38%), Positives = 173/310 (55%), Gaps = 7/310 (2%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+ + LP E+G+LKNL  L+L  N L  LPKEIG    L  L+L  N++  IP  
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNIT 338
           +  L  L  L L  N+L ++P+ + +   L    +    L++LP   G L +L S+N   
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLN--- 169

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           LS N+    P     +   + S+  ++NQ+  +P  I  + +NL  +++  N LT+LP +
Sbjct: 170 LSYNQIKTIPKK-IEKLQKLQSLGLDNNQLTTLPQEI-GQLQNLQSLDLSTNRLTTLPQE 227

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L +L L +NQ++ L  +I  L NL+ L L NN L  L   I  L+ LK LDL  
Sbjct: 228 IGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLGS 287

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L + P EIG LK LQ L L SNQL +LP  IG L NL  L +  N L ++P+EIG L+
Sbjct: 288 NQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQ 347

Query: 519 NLHTLYLNDN 528
           NL  L+LN+N
Sbjct: 348 NLQELFLNNN 357



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/350 (34%), Positives = 184/350 (52%), Gaps = 26/350 (7%)

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           T L  +L N  ++R LDL  N+   LP  + KL +L+ L L  N++  +  +I  L NL 
Sbjct: 38  TDLAKTLQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 97

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L++  N+I+ +P E+ +L+ L +L L +N L  LP+EIG    L  L L  N+L  +P 
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ 157

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +G L NL  L LSYN+++++P+ + K   L    ++   L++LP  +   L ++ ++ L
Sbjct: 158 EIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEI-GQLQNLQSLDL 216

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           S N+ T  P                               +NL  + +  N LT LP ++
Sbjct: 217 STNRLTTLPQE-------------------------IGHLQNLQDLYLVSNQLTILPNEI 251

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G    L  LNL  N+++ LS++I+ L NL+ L L +N L   P  IG L+ L+ LDL  N
Sbjct: 252 GQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLGSNQLTTFPKEIGQLKNLQVLDLGSN 311

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
           +L +LP  IG LK LQ L L SNQL +LP+ IG L NL  L +  N L S
Sbjct: 312 QLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 361



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 186/353 (52%), Gaps = 26/353 (7%)

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
            + T L  +++    +  L L  N+  +LP +IG + NL  L L +N LT LP  +  L+
Sbjct: 35  GTYTDLAKTLQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLK 94

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
            LR L+L  N++  +P  + KL  L+ LYL  N++ T+  +I  L  L  L +  N++  
Sbjct: 95  NLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTT 154

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+G+LKNL +L+L++N ++ +PK+I     L +L L +N+L  +P  +G L NL  L
Sbjct: 155 LPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 214

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            LS NRL ++P+ +    +L +  +    L+ LP+ +                       
Sbjct: 215 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI----------------------- 251

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              Q  ++ ++N  +N++  +   I  + +NL  +++  N LT+ P ++G    L  L+L
Sbjct: 252 --GQLKNLQTLNLRNNRLTTLSKEI-EQLQNLKSLDLGSNQLTTFPKEIGQLKNLQVLDL 308

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           G+NQ++ L E I  L NL+ L L +N L  LP  IG L+ L+ L L  N+L S
Sbjct: 309 GSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 361



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 174/311 (55%), Gaps = 3/311 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS +    LP  + KL +L+EL L  N+L  LP +IG + NL  L L+ N + ++P  
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L+ L L +N+L  LP  + +L  L+ LYL  N++ T+  +I  L NL  L++  
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I+ +P ++ +L+ L +L L +N L  LP+EIG    L +LDL  N L  +P  +G+L 
Sbjct: 173 NQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L  +P  + +  +L   N+    L++L    +  L ++ ++ L  N+ T
Sbjct: 233 NLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKE-IEQLQNLKSLDLGSNQLT 291

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P     Q  ++  ++   NQ+  +P GI  + KNL  +++  N LT+LP ++G    L
Sbjct: 292 TFPK-EIGQLKNLQVLDLGSNQLTTLPEGI-GQLKNLQTLDLDSNQLTTLPQEIGQLQNL 349

Query: 406 TELNLGTNQIS 416
            EL L  NQ+S
Sbjct: 350 QELFLNNNQLS 360



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 139/249 (55%), Gaps = 1/249 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS + I  +P  +EKL  L+ LYL  N+L +LP +IG +  L  L L +N LT
Sbjct: 94  KNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT 153

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L+ L+L +N++  +P  + KL  L+ L L  N++ T+  +I  L NL  
Sbjct: 154 TLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQS 213

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G L+NL  L L  N L  LP EIG    L TL+L++N L  +   
Sbjct: 214 LDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKE 273

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  N+L + P+ + +  +L   ++    L++LP+G +  L ++  + L 
Sbjct: 274 IEQLQNLKSLDLGSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEG-IGQLKNLQTLDLD 332

Query: 341 RNKFTAYPS 349
            N+ T  P 
Sbjct: 333 SNQLTTLPQ 341



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/212 (40%), Positives = 125/212 (58%), Gaps = 5/212 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L+LS + I  +P  +EKL  L+ L L  N+L +LP +IG + NL  L L+ N LT
Sbjct: 163 KNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLT 222

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  + +LQ L+ L L  N+L  LP  + +L +L+ L LR NR+ T+  +I+ L NL  
Sbjct: 223 TLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKS 282

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++   P E+G+LKNL  LDL  N L  LP+ IG    L TLDL  N+L  +P  
Sbjct: 283 LDLGSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 342

Query: 281 LGNLINLTRLRLSYNRLES-----VPETLSKC 307
           +G L NL  L L+ N+L S     + + L KC
Sbjct: 343 IGQLQNLQELFLNNNQLSSQEKKRIRKLLPKC 374



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 125/217 (57%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L K+ +T LP  + +L +L+ L L  N++ ++P +I  +  L  LGL  N LT+LP  
Sbjct: 145 LYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQE 204

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ LDL  N+L  LP  +  L +L+ LYL  N++  +  +I  L NL  L++R+
Sbjct: 205 IGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 264

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  L  E+ +L+NL +LDL  N L   PKEIG    L  LDL  N+L  +P+ +G L 
Sbjct: 265 NRLTTLSKEIEQLQNLKSLDLGSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLK 324

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           NL  L L  N+L ++P+ + +  +L E  +    LSS
Sbjct: 325 NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 361



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 106/177 (59%), Gaps = 1/177 (0%)

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
           +++  N   +LP ++G    L ELNL  NQ++ L ++I  L NL  L LS N +K +P  
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
           I  L+KL+ L L  N+L +LP EIG L++LQ L L  NQL +LP+ IG L NL  L++  
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 172

Query: 505 NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N +++IP++I  L+ L +L L DN  L  +P E+    NLQ + L    L+ +P EI
Sbjct: 173 NQIKTIPKKIEKLQKLQSLGL-DNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 228



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 105/176 (59%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K + + +L L  + +T LP  + +L +L+ L L  N+L +LP +IG++ NL  L L  N 
Sbjct: 184 KLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQ 243

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT LP+ +  L+ L+ L+LR+N+L  L   + +L +LK L L  N++ T   +I  L NL
Sbjct: 244 LTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLGSNQLTTFPKEIGQLKNL 303

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
            +L +  N++  LP  +G+LKNL TLDL  N L  LP+EIG    L  L L +N+L
Sbjct: 304 QVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 359



 Score = 39.3 bits (90), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 1/92 (1%)

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
           F+ ELQ    +S     L + + +   +  L +  N  +++P+EIG L+NL  L LN N 
Sbjct: 23  FIYELQAEESESGTYTDLAKTLQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQ 82

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L  +P E+    NL+ ++L    +  IP EI
Sbjct: 83  -LTILPKEIGQLKNLRKLNLSANQIKTIPKEI 113


>gi|255081704|ref|XP_002508074.1| predicted protein [Micromonas sp. RCC299]
 gi|226523350|gb|ACO69332.1| predicted protein [Micromonas sp. RCC299]
          Length = 344

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 118/308 (38%), Positives = 172/308 (55%), Gaps = 4/308 (1%)

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP ELG L  L  L+++ N L  LP EIG  T LV L L  N+L ++P  +G L +L  L
Sbjct: 21  LPAELGRLSALRELNVSRNALTLLPVEIGQLTSLVKLSLTENQLTSVPAEIGQLASLRVL 80

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            LS N+L S+P  +     L E  + G  L+S+P  +   LTS+  + L  N+ T+ P+ 
Sbjct: 81  DLSDNQLTSLPAEIGLLTALQELYLYGNQLTSVPAEIWQ-LTSLRKLLLDDNELTSVPAE 139

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              Q TS+  +    NQ+  +P  I   A +L++  +  N L S+P ++G    LTEL L
Sbjct: 140 -IGQLTSLEVLGLTDNQLTSVPAEIGQLA-SLTESGLSGNRLASVPAEIGLLASLTELFL 197

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             NQ++ +  +I  L +L+ L L +N L  +P   G L  L  L L +N+L S+P E+G 
Sbjct: 198 SGNQLTSVPAEIGQLTSLQELWLDDNELTSVPEETGQLASLMVLSLRDNELTSVPAEVGQ 257

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+ L L  NQL S+P  IG LT L+ L + +N L S+P EIG L +L  LYL+DN  
Sbjct: 258 LTSLKSLYLYGNQLTSVPAEIGQLTLLTELFLDDNELTSVPAEIGQLRSLEKLYLDDNK- 316

Query: 531 LNNIPFEL 538
           L ++P E+
Sbjct: 317 LTSVPAEI 324



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/352 (34%), Positives = 184/352 (52%), Gaps = 27/352 (7%)

Query: 103 ILNLDLSKSSITH-LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++ LDL    +T  LP  + +L+ L EL +  N L  LP +IG +T+L  L L EN LTS
Sbjct: 7   VVELDLEDVDLTAALPAELGRLSALRELNVSRNALTLLPVEIGQLTSLVKLSLTENQLTS 66

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  +  L  LRVLDL  N+L  LP  +  LT+L+ LYL  N++ +V  +I  L++L  L
Sbjct: 67  VPAEIGQLASLRVLDLSDNQLTSLPAEIGLLTALQELYLYGNQLTSVPAEIWQLTSLRKL 126

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + DN++  +P E+G+L +L  L L  N L  +P EIG    L    L  N L ++P  +
Sbjct: 127 LLDDNELTSVPAEIGQLTSLEVLGLTDNQLTSVPAEIGQLASLTESGLSGNRLASVPAEI 186

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L +LT L LS N+L SVP  + +   L E  ++   L+S+P+     L S+  ++L  
Sbjct: 187 GLLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDDNELTSVPEE-TGQLASLMVLSLRD 245

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T+ P+    Q TS+ S+    NQ                        LTS+P ++G 
Sbjct: 246 NELTSVPA-EVGQLTSLKSLYLYGNQ------------------------LTSVPAEIGQ 280

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
              LTEL L  N+++ +  +I  L +LE L L +N L  +P+ I  LR   C
Sbjct: 281 LTLLTELFLDDNELTSVPAEIGQLRSLEKLYLDDNKLTSVPAEIRELRAAGC 332



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/315 (36%), Positives = 175/315 (55%), Gaps = 7/315 (2%)

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
            +LP  L  L  LR L++  N L  LP+ + +LTSL  L L  N++ +V  +I  L++L 
Sbjct: 19  AALPAELGRLSALRELNVSRNALTLLPVEIGQLTSLVKLSLTENQLTSVPAEIGQLASLR 78

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
           +L + DN++  LP E+G L  L  L L  N L  +P EI   T L  L L  NEL ++P 
Sbjct: 79  VLDLSDNQLTSLPAEIGLLTALQELYLYGNQLTSVPAEIWQLTSLRKLLLDDNELTSVPA 138

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNI 337
            +G L +L  L L+ N+L SVP  + +   L E  + G  L+S+P   GLL+SLT    +
Sbjct: 139 EIGQLTSLEVLGLTDNQLTSVPAEIGQLASLTESGLSGNRLASVPAEIGLLASLT---EL 195

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            LS N+ T+ P+    Q TS+  +  + N++  +P      A +L  ++++DN LTS+P 
Sbjct: 196 FLSGNQLTSVPAE-IGQLTSLQELWLDDNELTSVPEETGQLA-SLMVLSLRDNELTSVPA 253

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++G    L  L L  NQ++ +  +I  L  L  L L +N L  +P+ IG LR L+ L L+
Sbjct: 254 EVGQLTSLKSLYLYGNQLTSVPAEIGQLTLLTELFLDDNELTSVPAEIGQLRSLEKLYLD 313

Query: 458 ENKLESLPNEIGFLK 472
           +NKL S+P EI  L+
Sbjct: 314 DNKLTSVPAEIRELR 328



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/304 (35%), Positives = 165/304 (54%), Gaps = 3/304 (0%)

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           ++  LS L  L++  N +  LP E+G+L +LV L L  N L  +P EIG    L  LDL 
Sbjct: 24  ELGRLSALRELNVSRNALTLLPVEIGQLTSLVKLSLTENQLTSVPAEIGQLASLRVLDLS 83

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
            N+L ++P  +G L  L  L L  N+L SVP  + +   L +  ++   L+S+P   +  
Sbjct: 84  DNQLTSLPAEIGLLTALQELYLYGNQLTSVPAEIWQLTSLRKLLLDDNELTSVP-AEIGQ 142

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           LTS+  + L+ N+ T+ P+    Q  S+       N++  +P  I   A +L+++ +  N
Sbjct: 143 LTSLEVLGLTDNQLTSVPAE-IGQLASLTESGLSGNRLASVPAEIGLLA-SLTELFLSGN 200

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            LTS+P ++G    L EL L  N+++ + E+   L +L VL L +N L  +P+ +G L  
Sbjct: 201 QLTSVPAEIGQLTSLQELWLDDNELTSVPEETGQLASLMVLSLRDNELTSVPAEVGQLTS 260

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           LK L L  N+L S+P EIG L  L  L L  N+L S+P  IG L +L  L + +N L S+
Sbjct: 261 LKSLYLYGNQLTSVPAEIGQLTLLTELFLDDNELTSVPAEIGQLRSLEKLYLDDNKLTSV 320

Query: 511 PEEI 514
           P EI
Sbjct: 321 PAEI 324



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 149/274 (54%), Gaps = 2/274 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           +++ L L+++ +T +P  + +L  L  L L  N+L SLP++IG +T L  L L  N LTS
Sbjct: 53  SLVKLSLTENQLTSVPAEIGQLASLRVLDLSDNQLTSLPAEIGLLTALQELYLYGNQLTS 112

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  +  L  LR L L  N+L  +P  + +LTSL++L L  N++ +V  +I  L++L+  
Sbjct: 113 VPAEIWQLTSLRKLLLDDNELTSVPAEIGQLTSLEVLGLTDNQLTSVPAEIGQLASLTES 172

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  +P E+G L +L  L L+ N L  +P EIG  T L  L L  NEL ++P+  
Sbjct: 173 GLSGNRLASVPAEIGLLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDDNELTSVPEET 232

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L +L  L L  N L SVP  + +   L    + G  L+S+P   +  LT +  + L  
Sbjct: 233 GQLASLMVLSLRDNELTSVPAEVGQLTSLKSLYLYGNQLTSVP-AEIGQLTLLTELFLDD 291

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
           N+ T+ P+    Q  S+  +  + N++  +P  I
Sbjct: 292 NELTSVPA-EIGQLRSLEKLYLDDNKLTSVPAEI 324



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 127/220 (57%), Gaps = 7/220 (3%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  + +T +P  + +LT LE L L  N+L S+P++IG + +LT  GL+ N L S+P  + 
Sbjct: 128 LDDNELTSVPAEIGQLTSLEVLGLTDNQLTSVPAEIGQLASLTESGLSGNRLASVPAEIG 187

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
            L  L  L L  N+L  +P  + +LTSL+ L+L  N + +V  +   L++L +LS+RDN+
Sbjct: 188 LLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDDNELTSVPEETGQLASLMVLSLRDNE 247

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           +  +P E+G+L +L +L L  N L  +P EIG  T+L  L L  NEL ++P  +G L +L
Sbjct: 248 LTSVPAEVGQLTSLKSLYLYGNQLTSVPAEIGQLTLLTELFLDDNELTSVPAEIGQLRSL 307

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
            +L L  N+L SVP        + E    GC +  L DG+
Sbjct: 308 EKLYLDDNKLTSVP------AEIRELRAAGCNV-ELDDGV 340



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 2/179 (1%)

Query: 384 KVNMKD-NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
           +++++D +L  +LP +LG    L ELN+  N ++ L  +I  L +L  L L+ N L  +P
Sbjct: 9   ELDLEDVDLTAALPAELGRLSALRELNVSRNALTLLPVEIGQLTSLVKLSLTENQLTSVP 68

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
           + IG L  L+ LDL +N+L SLP EIG L  LQ L L  NQL S+P  I  LT+L  L +
Sbjct: 69  AEIGQLASLRVLDLSDNQLTSLPAEIGLLTALQELYLYGNQLTSVPAEIWQLTSLRKLLL 128

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            +N L S+P EIG L +L  L L DN  L ++P E+   ++L    L    L+ +P+EI
Sbjct: 129 DDNELTSVPAEIGQLTSLEVLGLTDNQ-LTSVPAEIGQLASLTESGLSGNRLASVPAEI 186


>gi|418712108|ref|ZP_13272853.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791375|gb|EKR85051.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 380

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 118/313 (37%), Positives = 180/313 (57%), Gaps = 4/313 (1%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLDL+ N  + LPKEIG    L  L+L  N+L  +P  +G L NL +L LS N+++++P+
Sbjct: 53  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 112

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + K   L    +    L++LP  +   L  +  + L +N+ T  P     Q  ++ S+N
Sbjct: 113 EIEKLQKLQSLYLPNNQLTTLPQEI-GQLQKLQWLYLPKNQLTTLPQE-IGQLKNLKSLN 170

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQI  IP  I  + + L  + + +N LT+LP ++G    L  L+L TN+++ L ++I
Sbjct: 171 LSYNQIKTIPKEI-EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 229

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            +L NL+ L L +N L  LP+ IG L+ L+ L+L  N+L +L  EI  L+ L+ L L+SN
Sbjct: 230 GHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 289

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL   P+ IG L NL  L +G N L ++PE IG L+NL TL L+ N  L  +P E+    
Sbjct: 290 QLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQ-LTTLPQEIGQLQ 348

Query: 543 NLQIMSLDNCPLS 555
           NLQ + L+N  LS
Sbjct: 349 NLQELFLNNNQLS 361



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 126/370 (34%), Positives = 193/370 (52%), Gaps = 31/370 (8%)

Query: 145 YVTNLTCLGLAEN-----SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILY 199
           ++ +L+C   AE      + T L  +L N  ++R LDL  N+   LP  + KL +L+ L 
Sbjct: 19  FLMHLSCEIQAEEFEQQETYTDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELN 78

Query: 200 LRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIG 259
           L  N++  +  +I  L NL  L++  N+I+ +P E+ +L+ L +L L +N L  LP+EIG
Sbjct: 79  LNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIG 138

Query: 260 NCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA 319
               L  L L  N+L  +P  +G L NL  L LSYN+++++P+ + K   L    ++   
Sbjct: 139 QLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQ 198

Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           L++LP  +   L ++ ++ LS N+ T  P                               
Sbjct: 199 LTTLPQEI-GQLQNLQSLDLSTNRLTTLPQE-------------------------IGHL 232

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           +NL  + +  N LT LP ++G    L  LNL  N+++ LS++I+ L NL+ L L +N L 
Sbjct: 233 QNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLT 292

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
             P  IG L+ L+ LDL  N+L +LP  IG LK LQ L L SNQL +LP+ IG L NL  
Sbjct: 293 IFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQE 352

Query: 500 LSVGENNLQS 509
           L +  N L S
Sbjct: 353 LFLNNNQLSS 362



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 119/310 (38%), Positives = 172/310 (55%), Gaps = 7/310 (2%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+ + LP E+G+LKNL  L+L  N L  LPKEIG    L  L+L  N++  IP  
Sbjct: 54  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 113

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNIT 338
           +  L  L  L L  N+L ++P+ + +   L    +    L++LP   G L +L S+N   
Sbjct: 114 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLN--- 170

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           LS N+    P     +   + S+  ++NQ+  +P  I  + +NL  +++  N LT+LP +
Sbjct: 171 LSYNQIKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEI-GQLQNLQSLDLSTNRLTTLPQE 228

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L +L L +NQ++ L  +I  L NL+ L L NN L  L   I  L+ LK LDL  
Sbjct: 229 IGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRS 288

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L   P EIG LK LQ L L SNQL +LP  IG L NL  L +  N L ++P+EIG L+
Sbjct: 289 NQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQ 348

Query: 519 NLHTLYLNDN 528
           NL  L+LN+N
Sbjct: 349 NLQELFLNNN 358



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 187/355 (52%), Gaps = 26/355 (7%)

Query: 109 SKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLAN 168
            + + T L  +++    +  L L  N+  +LP +IG + NL  L L +N LT LP  +  
Sbjct: 34  QQETYTDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQ 93

Query: 169 LQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           L+ LR L+L  N++  +P  + KL  L+ LYL  N++ T+  +I  L  L  L +  N++
Sbjct: 94  LKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQL 153

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LP E+G+LKNL +L+L++N ++ +PKEI     L +L L +N+L  +P  +G L NL 
Sbjct: 154 TTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQ 213

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L LS NRL ++P+ +    +L +  +    L+ LP+ +                     
Sbjct: 214 SLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI--------------------- 252

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                Q  ++ ++N  +N++  +   I  + +NL  ++++ N LT  P ++G    L  L
Sbjct: 253 ----GQLKNLQTLNLRNNRLTTLSKEI-EQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVL 307

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           +LG+NQ++ L E I  L NL+ L L +N L  LP  IG L+ L+ L L  N+L S
Sbjct: 308 DLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 362



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/311 (34%), Positives = 174/311 (55%), Gaps = 3/311 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS +    LP  + KL +L+EL L  N+L  LP +IG + NL  L L+ N + ++P  
Sbjct: 54  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 113

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L+ L L +N+L  LP  + +L  L+ LYL  N++ T+  +I  L NL  L++  
Sbjct: 114 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 173

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I+ +P E+ +L+ L +L L +N L  LP+EIG    L +LDL  N L  +P  +G+L 
Sbjct: 174 NQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 233

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L  +P  + +  +L   N+    L++L    +  L ++ ++ L  N+ T
Sbjct: 234 NLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKE-IEQLQNLKSLDLRSNQLT 292

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P     Q  ++  ++   NQ+  +P GI  + KNL  +++  N LT+LP ++G    L
Sbjct: 293 IFPK-EIGQLKNLQVLDLGSNQLTTLPEGI-GQLKNLQTLDLDSNQLTTLPQEIGQLQNL 350

Query: 406 TELNLGTNQIS 416
            EL L  NQ+S
Sbjct: 351 QELFLNNNQLS 361



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/212 (41%), Positives = 126/212 (59%), Gaps = 5/212 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L+LS + I  +P  +EKL  L+ L L  N+L +LP +IG + NL  L L+ N LT
Sbjct: 164 KNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLT 223

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  + +LQ L+ L L  N+L  LP  + +L +L+ L LR NR+ T+  +I+ L NL  
Sbjct: 224 TLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKS 283

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +R N++   P E+G+LKNL  LDL  N L  LP+ IG    L TLDL  N+L  +P  
Sbjct: 284 LDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 343

Query: 281 LGNLINLTRLRLSYNRLES-----VPETLSKC 307
           +G L NL  L L+ N+L S     + + L KC
Sbjct: 344 IGQLQNLQELFLNNNQLSSQEKKRIRKLLPKC 375



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/292 (34%), Positives = 154/292 (52%), Gaps = 4/292 (1%)

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
           Q     ++   L N + +  L LS NR +++P+ + K  +L E N+    L+ LP   + 
Sbjct: 34  QQETYTDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKE-IG 92

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
            L ++  + LS N+    P     +   + S+   +NQ+  +P  I  + + L  + +  
Sbjct: 93  QLKNLRKLNLSANQIKTIPK-EIEKLQKLQSLYLPNNQLTTLPQEI-GQLQKLQWLYLPK 150

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
           N LT+LP ++G    L  LNL  NQI  + ++I+ L  L+ L L NN L  LP  IG L+
Sbjct: 151 NQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQ 210

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            L+ LDL  N+L +LP EIG L+ LQ L L SNQL  LP  IG L NL  L++  N L +
Sbjct: 211 NLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTT 270

Query: 510 IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           + +EI  L+NL +L L  N  L   P E+    NLQ++ L +  L+ +P  I
Sbjct: 271 LSKEIEQLQNLKSLDLRSNQ-LTIFPKEIGQLKNLQVLDLGSNQLTTLPEGI 321


>gi|418726673|ref|ZP_13285284.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960583|gb|EKO24337.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 447

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 146/430 (33%), Positives = 235/430 (54%), Gaps = 11/430 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +DLS+      P  + +L +LE L L  N++  LP +I  + NL  L L  N LT +P  
Sbjct: 1   MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L +L L++N+++ LP  + K  +L+ L LR NR+ T+  +I  L  L  L++ +
Sbjct: 61  IWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLEN 120

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I+ LP E+G L+NL   +L+ N L  +PKEIGN   L  L L++N+L  +P  +  L 
Sbjct: 121 NRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQ 180

Query: 286 NLTRLRLSYNRL-----ESVPETLSKC-VHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
           +L  L L  N L     + +   L  C + L +   EG    +L   L   L  I +++L
Sbjct: 181 DLEVLNLLINPLLFEERKKIQALLPDCDIDLRDVE-EGETYRNLNLALEQPL-KILSLSL 238

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
              +F+ +P     +  ++ S++     +  +P  I  R K+L ++++  N L SLP ++
Sbjct: 239 EYQQFSLFPKEI-LKLKNLRSLSLYDTSLVALPKEIV-RLKHLERLSLGLNQLKSLPKEI 296

Query: 400 GTWVGLTELNLGT-NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           G    L  L++G  N+   L ++I  L NL  L+L+ N  K  P  I  L+KL  L++  
Sbjct: 297 GLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWKLKKLVILNVNT 356

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L++LP +IG LK LQ L L  N+L +LP  IG L NL+ L +  N ++++PEEI  L+
Sbjct: 357 NQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQ 416

Query: 519 NLHTLYLNDN 528
           NL  L L +N
Sbjct: 417 NLRKLTLYEN 426



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 148/429 (34%), Positives = 222/429 (51%), Gaps = 16/429 (3%)

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           K A  P +I  +  L  L L EN +T LP  +  L+ L+ L L  NKL  +P  +++L +
Sbjct: 7   KFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKEIWELEN 66

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L IL L+ NRI T+  +I+   NL  L++R N++  LP E+GELK L  L+L +N ++ L
Sbjct: 67  LTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKIL 126

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P EIG    L   +L  N+L +IP  +GNL NL  L L  N+L+++P  + K   L   N
Sbjct: 127 PNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLN 186

Query: 315 V--------EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
           +        E   + +L       L  +      RN   A       Q   + S++ E+ 
Sbjct: 187 LLINPLLFEERKKIQALLPDCDIDLRDVEEGETYRNLNLAL-----EQPLKILSLSLEYQ 241

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
           Q    P  I  + KNL  +++ D  L +LP ++     L  L+LG NQ+  L ++I  L 
Sbjct: 242 QFSLFPKEIL-KLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLR 300

Query: 427 NLEVL-VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
           NL  L + +NN  + LP  I  L+ L+ L L +N+ +  P EI  LK+L  L + +NQL 
Sbjct: 301 NLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWKLKKLVILNVNTNQLD 360

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
           +LP  IG L  L  L +  N L ++P EIG L NL  LYL  N  +  +P E+A   NL+
Sbjct: 361 ALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNR-IKTLPEEIARLQNLR 419

Query: 546 IMSLDNCPL 554
            ++L   P+
Sbjct: 420 KLTLYENPI 428



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 183/387 (47%), Gaps = 48/387 (12%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGY--------------- 145
           EN+  L L  + I+ LP  +EK  +L+EL L GN+L +LP +IG                
Sbjct: 65  ENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIK 124

Query: 146 --------VTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
                   + NL    L+ N L S+P  + NLQ LR+L L +N+L  LP  + KL  L++
Sbjct: 125 ILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 184

Query: 198 LYLRFN--------RIKTVHPDIQYLSNLSMLSMRD----NKIRELPPELGELKNLVTLD 245
           L L  N        +I+ + PD         + +RD       R L   L +   +++L 
Sbjct: 185 LNLLINPLLFEERKKIQALLPDCD-------IDLRDVEEGETYRNLNLALEQPLKILSLS 237

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           L +      PKEI     L +L L    LV +P  +  L +L RL L  N+L+S+P+ + 
Sbjct: 238 LEYQQFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIG 297

Query: 306 KCVHLNEFNVEG-CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFE 364
              +L   ++        LP   ++ L ++ ++ L++N+F  +P     +   +  +N  
Sbjct: 298 LLRNLRSLDIGANNEFEVLPKE-IARLQNLRSLLLNQNRFKIFPKEI-WKLKKLVILNVN 355

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN 424
            NQ+D +P  I  R K L  +++  N LT+LP ++G    LTEL L  N+I  L E+I  
Sbjct: 356 TNQLDALPEKI-GRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIAR 414

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           L NL  L L  N +   P  +  +RKL
Sbjct: 415 LQNLRKLTLYENPIP--PQELDKIRKL 439



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 163/346 (47%), Gaps = 31/346 (8%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           +DL+       PKEI     L  L L+ N +  +P  +  L NL  L L+ N+L  VP+ 
Sbjct: 1   MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           + +  +L    ++   +S+LP  +  S  ++  + L  N+    P G   +   +  +N 
Sbjct: 61  IWELENLTILRLKNNRISTLPKEIEKS-KNLQELNLRGNRLVTLP-GEIGELKLLEELNL 118

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
           E+N+I  +P  I +  +NL   N+  N L S+P ++G    L  L L  NQ+  L   ++
Sbjct: 119 ENNRIKILPNEIGA-LENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQME 177

Query: 424 NLVNLEVL-VLSNNLL----KK----LPSSIGNLR-------------------KLKCLD 455
            L +LEVL +L N LL    KK    LP    +LR                   K+  L 
Sbjct: 178 KLQDLEVLNLLINPLLFEERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLS 237

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           LE  +    P EI  LK L+ L L    LV+LP+ I  L +L  LS+G N L+S+P+EIG
Sbjct: 238 LEYQQFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIG 297

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L NL +L +  N     +P E+A   NL+ + L+       P EI
Sbjct: 298 LLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI 343



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 127/276 (46%), Gaps = 52/276 (18%)

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + LSR KF  +P     +   +  +  E N+I  +P  I ++ KNL ++ +  N LT +P
Sbjct: 1   MDLSRQKFAVFPKEI-WELEYLEILKLEENRITVLPREI-NKLKNLKELYLNGNKLTIVP 58

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++     LT L L  N+IS L ++I+   NL+ L L  N L  LP  IG L+ L+ L+L
Sbjct: 59  KEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNL 118

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
           E N+++ LPNEIG L+ L    L  N+L S+P+ IG+L NL  L +  N L+++P ++  
Sbjct: 119 ENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEK 178

Query: 517 LENLHTL----------------------------------YLNDNTCLNN--------- 533
           L++L  L                                  Y N N  L           
Sbjct: 179 LQDLEVLNLLINPLLFEERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSL 238

Query: 534 -------IPFELALCSNLQIMSLDNCPLSQIPSEIV 562
                   P E+    NL+ +SL +  L  +P EIV
Sbjct: 239 EYQQFSLFPKEILKLKNLRSLSLYDTSLVALPKEIV 274


>gi|427735457|ref|YP_007055001.1| hypothetical protein Riv7116_1913 [Rivularia sp. PCC 7116]
 gi|427370498|gb|AFY54454.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 955

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 121/332 (36%), Positives = 186/332 (56%), Gaps = 18/332 (5%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTHLEEL----YLY----------GNKLASLPSQ 142
           R   +    LDLS + +T LPP + KLT L+ L    Y Y          GNKL+ LP +
Sbjct: 12  RAATQGCAGLDLSGNELTVLPPEIGKLTQLKRLILGKYRYDDKGRIVGTIGNKLSKLPRE 71

Query: 143 IGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           IG +  L    +  N L+SLP  +  L +L+ L+L HN+L+ LP  + +LT L+ L L F
Sbjct: 72  IGLLAQLEEFHIVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQSLDLSF 131

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N++ ++  +I  L+ L  L++  N++  LP E+G+L  L TLDL +N L  LP EIG  T
Sbjct: 132 NQLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLT 191

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L TLDL +N+L ++P  +G L  L  L L  N+L S+P  + +  +L   ++    LSS
Sbjct: 192 KLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTNLQFLHLSHNKLSS 251

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LP  ++  LT++  + LS NK ++ P+    Q T++ S++  HN++  +P  I    K L
Sbjct: 252 LPAEIV-QLTNLQFLHLSHNKLSSLPA-EIVQLTNLQSLDLSHNKLSSLPAEIGQLTK-L 308

Query: 383 SKVNMKDNLLTSLPLDLGT-WVGLTELNLGTN 413
             +N+K N L SLP ++G  +  L EL L +N
Sbjct: 309 QFLNLKGNQLNSLPTEIGHLYSCLRELKLDSN 340



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/284 (36%), Positives = 167/284 (58%), Gaps = 2/284 (0%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           ++ LP  +  L  LEE ++  NKL+SLP++IG +  L  L L+ N L+SLP  +  L +L
Sbjct: 65  LSKLPREIGLLAQLEEFHIVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKL 124

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
           + LDL  N+L+ LP  + +L  L+ L L  NR+ ++  +I  L+ L  L + +N++  LP
Sbjct: 125 QSLDLSFNQLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSSLP 184

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            E+G+L  L TLDL +N L  LP EIG  T L TLDL +N+L ++P  +G L NL  L L
Sbjct: 185 AEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTNLQFLHL 244

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           S+N+L S+P  + +  +L   ++    LSSLP  ++  LT++ ++ LS NK ++ P+   
Sbjct: 245 SHNKLSSLPAEIVQLTNLQFLHLSHNKLSSLPAEIV-QLTNLQSLDLSHNKLSSLPA-EI 302

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
            Q T +  +N + NQ++ +P  I      L ++ +  NLL S P
Sbjct: 303 GQLTKLQFLNLKGNQLNSLPTEIGHLYSCLRELKLDSNLLESPP 346



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 140/402 (34%), Positives = 190/402 (47%), Gaps = 58/402 (14%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           LDL  N+L  LP  + KLT LK L L   R         Y     ++    NK+ +LP E
Sbjct: 21  LDLSGNELTVLPPEIGKLTQLKRLILGKYR---------YDDKGRIVGTIGNKLSKLPRE 71

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
           +G L  L    +  N L  LP EIG    L +L+L HN L ++P  +G L  L  L LS+
Sbjct: 72  IGLLAQLEEFHIVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQSLDLSF 131

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
           N+L S+P  + +   L   N+    LSSLP  +                          Q
Sbjct: 132 NQLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEI-------------------------GQ 166

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
            T + +++  +NQ+  +P  I    K L  +++ +N L+SLP ++G    L  L+L  NQ
Sbjct: 167 LTKLQTLDLYNNQLSSLPAEIGQLTK-LQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNNQ 225

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +S L  +I  L NL+ L LS+N L  LP+ I  L  L+ L L  NKL SLP EI  L  L
Sbjct: 226 LSSLPAEIGQLTNLQFLHLSHNKLSSLPAEIVQLTNLQFLHLSHNKLSSLPAEIVQLTNL 285

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           Q L L  N+L SLP  IG LT L +L++  N L S+P EIG L           +CL   
Sbjct: 286 QSLDLSHNKLSSLPAEIGQLTKLQFLNLKGNQLNSLPTEIGHL----------YSCLR-- 333

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
             EL L SNL         L   P EI+  G   I+ + K Q
Sbjct: 334 --ELKLDSNL---------LESPPPEILSKGTKAILNFYKQQ 364



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 170/337 (50%), Gaps = 27/337 (8%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +L+LS + ++ LP  + +LT L+ L L  N+L+SLP++IG +  L  L L+ N L+SLP 
Sbjct: 103 SLNLSHNRLSSLPAEIGQLTKLQSLDLSFNQLSSLPAEIGQLAKLQSLNLSHNRLSSLPA 162

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            +  L +L+ LDL +N+L+ LP  + +LT L+ L L  N++ ++  +I  L+ L  L + 
Sbjct: 163 EIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLY 222

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           +N++  LP E+G+L NL  L L+HN L  LP EI   T L  L L HN+L ++P  +  L
Sbjct: 223 NNQLSSLPAEIGQLTNLQFLHLSHNKLSSLPAEIVQLTNLQFLHLSHNKLSSLPAEIVQL 282

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
            NL  L LS+N+L S+P  + +   L   N++G  L+SLP  +    + +  + L  N  
Sbjct: 283 TNLQSLDLSHNKLSSLPAEIGQLTKLQFLNLKGNQLNSLPTEIGHLYSCLRELKLDSNLL 342

Query: 345 TAYP----SGGPTQFTSVYSINFEHNQIDKIPYGIF-----------SRAKNLSKVNMK- 388
            + P    S G     + Y    E   ID++    F           S AK +   N K 
Sbjct: 343 ESPPPEILSKGTKAILNFYKQQLEQT-IDRLYEAKFLIIGEGGAGKTSLAKKIEDENYKL 401

Query: 389 ----------DNLLTSLPLDLGTWVGLTELNLGTNQI 415
                     D +    PLD G    +   + G  +I
Sbjct: 402 KPDEESTEGIDVIQWKFPLDNGKEFRVNIWDFGGQEI 438


>gi|418678217|ref|ZP_13239491.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321407|gb|EJO69267.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 377

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 119/313 (38%), Positives = 176/313 (56%), Gaps = 4/313 (1%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            L+L+ N  + LPKEIG    L  L+L  N+L  +P  +G L NL +L L  N+   +P+
Sbjct: 50  VLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPK 109

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + K  +L E  +    L++LP+ +   L ++  + L+ N+F   P     Q  ++ ++N
Sbjct: 110 EVEKLENLKELYLGSNQLTTLPNEI-GQLKNLRVLELTHNQFKTIPKE-IGQLKNLQTLN 167

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQ+  +P  I  + KNL  + +  N LT+LP ++G    L  L L TN+++ L  +I
Sbjct: 168 LGYNQLTALPNEI-GQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEI 226

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NL+ L L +N L  LP+ IG L+ L+ L L  N+  +LP EIG L+ LQRL L  N
Sbjct: 227 GQLQNLQSLYLGSNQLTILPNEIGQLKNLQTLYLRYNQFTTLPKEIGKLQNLQRLELNYN 286

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL +LP+ IG L NL +L +G N    +PEEIG L+NL  LYL DN  L  IP E+    
Sbjct: 287 QLKTLPKGIGQLQNLQWLDLGYNQFTILPEEIGKLKNLQELYLRDNQ-LTTIPEEIGQLQ 345

Query: 543 NLQIMSLDNCPLS 555
           NLQ + L +  LS
Sbjct: 346 NLQELYLRDNQLS 358



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/335 (36%), Positives = 183/335 (54%), Gaps = 26/335 (7%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
            +++L L  NR KT+  +I  L NL  L++  N++  LP E+G+LKNL  L+L  N    
Sbjct: 47  DVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTI 106

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LPKE+     L  L L  N+L  +P+ +G L NL  L L++N+ +++P+ + +  +L   
Sbjct: 107 LPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTL 166

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           N+    L++LP+  +  L ++ ++ L  N+ TA P                 N+I ++  
Sbjct: 167 NLGYNQLTALPNE-IGQLKNLQSLYLGSNQLTALP-----------------NEIGQL-- 206

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
                 +NL  + +  N LT+LP ++G    L  L LG+NQ++ L  +I  L NL+ L L
Sbjct: 207 ------QNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNQLTILPNEIGQLKNLQTLYL 260

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
             N    LP  IG L+ L+ L+L  N+L++LP  IG L+ LQ L L  NQ   LP  IG 
Sbjct: 261 RYNQFTTLPKEIGKLQNLQRLELNYNQLKTLPKGIGQLQNLQWLDLGYNQFTILPEEIGK 320

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L NL  L + +N L +IPEEIG L+NL  LYL DN
Sbjct: 321 LKNLQELYLRDNQLTTIPEEIGQLQNLQELYLRDN 355



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/335 (35%), Positives = 178/335 (53%), Gaps = 26/335 (7%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L  N+  +LP +IG + NL  L L +N LT LP  +  L+ LR L+L  N+   LP  
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKE 110

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           V KL +LK LYL  N++ T+  +I  L NL +L +  N+ + +P E+G+LKNL TL+L +
Sbjct: 111 VEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGY 170

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L  LP EIG    L +L L  N+L  +P+ +G L NL  L LS NRL ++P  + +  
Sbjct: 171 NQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQ 230

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L    +    L+ LP+  +  L ++  + L  N+FT  P                  +I
Sbjct: 231 NLQSLYLGSNQLTILPNE-IGQLKNLQTLYLRYNQFTTLPK-----------------EI 272

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
            K+        +NL ++ +  N L +LP  +G    L  L+LG NQ + L E+I  L NL
Sbjct: 273 GKL--------QNLQRLELNYNQLKTLPKGIGQLQNLQWLDLGYNQFTILPEEIGKLKNL 324

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           + L L +N L  +P  IG L+ L+ L L +N+L S
Sbjct: 325 QELYLRDNQLTTIPEEIGQLQNLQELYLRDNQLSS 359



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/311 (34%), Positives = 169/311 (54%), Gaps = 3/311 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS +    LP  + KL +L+EL L  N+L  LP +IG + NL  L L +N  T LP  
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L  N+L  LP  + +L +L++L L  N+ KT+  +I  L NL  L++  
Sbjct: 111 VEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGY 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL +L L  N L  LP EIG    L +L L  N L  +P+ +G L 
Sbjct: 171 NQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQ 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L  +P  + +  +L    +     ++LP   +  L ++  + L+ N+  
Sbjct: 231 NLQSLYLGSNQLTILPNEIGQLKNLQTLYLRYNQFTTLPKE-IGKLQNLQRLELNYNQLK 289

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P  G  Q  ++  ++  +NQ   +P  I  + KNL ++ ++DN LT++P ++G    L
Sbjct: 290 TLPK-GIGQLQNLQWLDLGYNQFTILPEEI-GKLKNLQELYLRDNQLTTIPEEIGQLQNL 347

Query: 406 TELNLGTNQIS 416
            EL L  NQ+S
Sbjct: 348 QELYLRDNQLS 358



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/225 (41%), Positives = 129/225 (57%), Gaps = 3/225 (1%)

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + LS N+F   P     +  ++  +N   NQ+  +P  I  + KNL K+N+ DN  T LP
Sbjct: 51  LNLSANRFKTLPKE-IGKLKNLQELNLNKNQLTILPKEI-GQLKNLRKLNLYDNQFTILP 108

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++     L EL LG+NQ++ L  +I  L NL VL L++N  K +P  IG L+ L+ L+L
Sbjct: 109 KEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNL 168

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+L +LPNEIG LK LQ L L SNQL +LP  IG L NL  L +  N L ++P EIG 
Sbjct: 169 GYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQ 228

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+NL +LYL  N  L  +P E+    NLQ + L     + +P EI
Sbjct: 229 LQNLQSLYLGSNQ-LTILPNEIGQLKNLQTLYLRYNQFTTLPKEI 272



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 94/157 (59%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L LS + +T LP  + +L +L+ LYL  N+L  LP++IG + NL  L L  N  T
Sbjct: 207 QNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNQLTILPNEIGQLKNLQTLYLRYNQFT 266

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ L+ L+L +N+L  LP  + +L +L+ L L +N+   +  +I  L NL  
Sbjct: 267 TLPKEIGKLQNLQRLELNYNQLKTLPKGIGQLQNLQWLDLGYNQFTILPEEIGKLKNLQE 326

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L +RDN++  +P E+G+L+NL  L L  N L    KE
Sbjct: 327 LYLRDNQLTTIPEEIGQLQNLQELYLRDNQLSSEEKE 363


>gi|418708871|ref|ZP_13269671.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770801|gb|EKR46014.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|456969315|gb|EMG10349.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 447

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 146/430 (33%), Positives = 235/430 (54%), Gaps = 11/430 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +DLS+      P  + +L +LE L L  N++  LP +I  + NL  L L  N LT +P  
Sbjct: 1   MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L +L L++N+++ LP  + K  +L+ L LR NR+ T+  +I  L  L  L++ +
Sbjct: 61  IWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLEN 120

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I+ LP E+G L+NL   +L+ N L  +PKEIGN   L  L L++N+L  +P  +  L 
Sbjct: 121 NRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQ 180

Query: 286 NLTRLRLSYNRL-----ESVPETLSKC-VHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
           +L  L L  N L     + +   L  C + L +   EG    +L   L   L  I +++L
Sbjct: 181 DLEVLNLLINPLLFEERKKIQALLPDCDIDLRDVE-EGETYRNLNLALEQPL-KILSLSL 238

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
              +F+ +P     +  ++ S++     +  +P  I  R K+L ++++  N L SLP ++
Sbjct: 239 EYQQFSLFPKEI-LKLKNLRSLSLYDTSLVALPKEIV-RLKHLERLSLGLNQLKSLPKEI 296

Query: 400 GTWVGLTELNLGT-NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           G    L  L++G  N+   L ++I  L NL  L+L+ N  K  P  I  L+KL  L++  
Sbjct: 297 GLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNT 356

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L++LP +IG LK LQ L L  N+L +LP  IG L NL+ L +  N ++++PEEI  L+
Sbjct: 357 NQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQ 416

Query: 519 NLHTLYLNDN 528
           NL  L L +N
Sbjct: 417 NLRKLTLYEN 426



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 148/429 (34%), Positives = 222/429 (51%), Gaps = 16/429 (3%)

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           K A  P +I  +  L  L L EN +T LP  +  L+ L+ L L  NKL  +P  +++L +
Sbjct: 7   KFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKEIWELEN 66

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L IL L+ NRI T+  +I+   NL  L++R N++  LP E+GELK L  L+L +N ++ L
Sbjct: 67  LTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKIL 126

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P EIG    L   +L  N+L +IP  +GNL NL  L L  N+L+++P  + K   L   N
Sbjct: 127 PNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLN 186

Query: 315 V--------EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
           +        E   + +L       L  +      RN   A       Q   + S++ E+ 
Sbjct: 187 LLINPLLFEERKKIQALLPDCDIDLRDVEEGETYRNLNLAL-----EQPLKILSLSLEYQ 241

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
           Q    P  I  + KNL  +++ D  L +LP ++     L  L+LG NQ+  L ++I  L 
Sbjct: 242 QFSLFPKEIL-KLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLR 300

Query: 427 NLEVL-VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
           NL  L + +NN  + LP  I  L+ L+ L L +N+ +  P EI  LK+L  L + +NQL 
Sbjct: 301 NLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLD 360

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
           +LP  IG L  L  L +  N L ++P EIG L NL  LYL  N  +  +P E+A   NL+
Sbjct: 361 ALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNR-IKTLPEEIARLQNLR 419

Query: 546 IMSLDNCPL 554
            ++L   P+
Sbjct: 420 KLTLYENPI 428



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 183/387 (47%), Gaps = 48/387 (12%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGY--------------- 145
           EN+  L L  + I+ LP  +EK  +L+EL L GN+L +LP +IG                
Sbjct: 65  ENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIK 124

Query: 146 --------VTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
                   + NL    L+ N L S+P  + NLQ LR+L L +N+L  LP  + KL  L++
Sbjct: 125 ILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 184

Query: 198 LYLRFN--------RIKTVHPDIQYLSNLSMLSMRD----NKIRELPPELGELKNLVTLD 245
           L L  N        +I+ + PD         + +RD       R L   L +   +++L 
Sbjct: 185 LNLLINPLLFEERKKIQALLPDCD-------IDLRDVEEGETYRNLNLALEQPLKILSLS 237

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           L +      PKEI     L +L L    LV +P  +  L +L RL L  N+L+S+P+ + 
Sbjct: 238 LEYQQFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIG 297

Query: 306 KCVHLNEFNVEG-CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFE 364
              +L   ++        LP   ++ L ++ ++ L++N+F  +P     +   +  +N  
Sbjct: 298 LLRNLRSLDIGANNEFEVLPKE-IARLQNLRSLLLNQNRFKIFPKEI-WELKKLVILNVN 355

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN 424
            NQ+D +P  I  R K L  +++  N LT+LP ++G    LTEL L  N+I  L E+I  
Sbjct: 356 TNQLDALPEKI-GRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIAR 414

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           L NL  L L  N +   P  +  +RKL
Sbjct: 415 LQNLRKLTLYENPIP--PQELDKIRKL 439



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 163/346 (47%), Gaps = 31/346 (8%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           +DL+       PKEI     L  L L+ N +  +P  +  L NL  L L+ N+L  VP+ 
Sbjct: 1   MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           + +  +L    ++   +S+LP  +  S  ++  + L  N+    P G   +   +  +N 
Sbjct: 61  IWELENLTILRLKNNRISTLPKEIEKS-KNLQELNLRGNRLVTLP-GEIGELKLLEELNL 118

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
           E+N+I  +P  I +  +NL   N+  N L S+P ++G    L  L L  NQ+  L   ++
Sbjct: 119 ENNRIKILPNEIGA-LENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQME 177

Query: 424 NLVNLEVL-VLSNNLL----KK----LPSSIGNLR-------------------KLKCLD 455
            L +LEVL +L N LL    KK    LP    +LR                   K+  L 
Sbjct: 178 KLQDLEVLNLLINPLLFEERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLS 237

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           LE  +    P EI  LK L+ L L    LV+LP+ I  L +L  LS+G N L+S+P+EIG
Sbjct: 238 LEYQQFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIG 297

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L NL +L +  N     +P E+A   NL+ + L+       P EI
Sbjct: 298 LLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI 343



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 127/276 (46%), Gaps = 52/276 (18%)

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + LSR KF  +P     +   +  +  E N+I  +P  I ++ KNL ++ +  N LT +P
Sbjct: 1   MDLSRQKFAVFPKEI-WELEYLEILKLEENRITVLPREI-NKLKNLKELYLNGNKLTIVP 58

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++     LT L L  N+IS L ++I+   NL+ L L  N L  LP  IG L+ L+ L+L
Sbjct: 59  KEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNL 118

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
           E N+++ LPNEIG L+ L    L  N+L S+P+ IG+L NL  L +  N L+++P ++  
Sbjct: 119 ENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEK 178

Query: 517 LENLHTL----------------------------------YLNDNTCLNN--------- 533
           L++L  L                                  Y N N  L           
Sbjct: 179 LQDLEVLNLLINPLLFEERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSL 238

Query: 534 -------IPFELALCSNLQIMSLDNCPLSQIPSEIV 562
                   P E+    NL+ +SL +  L  +P EIV
Sbjct: 239 EYQQFSLFPKEILKLKNLRSLSLYDTSLVALPKEIV 274


>gi|421117624|ref|ZP_15577983.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010838|gb|EKO68970.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 377

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/334 (35%), Positives = 182/334 (54%), Gaps = 26/334 (7%)

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           ++IL L  NR KT+  +I  L NL  L++  N++  LP E+G+LKNL  L+L+ N ++ +
Sbjct: 48  VRILDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTI 107

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           PKEI     L +L L +N+L  +P  +G L  L  L L  N+L ++P+ + +  +L   N
Sbjct: 108 PKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLN 167

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +    + ++P  +                          +   + S+  ++NQ+  +P  
Sbjct: 168 LSYNQIKTIPKEI-------------------------EKLQKLQSLGLDNNQLTTLPQE 202

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           I  + +NL  +++  N LT+LP ++G    L +L L +NQ++ L  +I  L NL+ L L 
Sbjct: 203 I-GQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLR 261

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
           NN L  L   I  L+ LK LDL  N+L + P EIG LK LQ L L SNQL +LP  IG L
Sbjct: 262 NNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQTLNLGSNQLTTLPEGIGQL 321

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            NL  L +  N L ++P+EIG L+NL  L+LN+N
Sbjct: 322 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNN 355



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/348 (34%), Positives = 184/348 (52%), Gaps = 26/348 (7%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N  ++R+LDL  N+   LP  + KL +L+ L L  N++  +  +I  L NL  L
Sbjct: 38  LTKALQNPLKVRILDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKL 97

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++  N+I+ +P E+ +L+ L +L L +N L  LP+EIG    L  L L  N+L  +P  +
Sbjct: 98  NLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI 157

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L LSYN+++++P+ + K   L    ++   L++LP   +  L ++ ++ LS 
Sbjct: 158 GQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQE-IGQLQNLQSLDLST 216

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P                               +NL  + +  N LT LP ++G 
Sbjct: 217 NRLTTLPQE-------------------------IGHLQNLQDLYLVSNQLTILPNEIGQ 251

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  LNL  N+++ LS++I+ L NL+ L L +N L   P  IG L+ L+ L+L  N+L
Sbjct: 252 LKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQTLNLGSNQL 311

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            +LP  IG LK LQ L L SNQL +LP+ IG L NL  L +  N L S
Sbjct: 312 TTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 359



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/311 (34%), Positives = 175/311 (56%), Gaps = 3/311 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS +    LP  + KL +L+EL L  N+L  LP +IG + NL  L L+ N + ++P  
Sbjct: 51  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L+ L L +N+L  LP  + +L  L+ LYL  N++ T+  +I  L NL  L++  
Sbjct: 111 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I+ +P E+ +L+ L +L L +N L  LP+EIG    L +LDL  N L  +P  +G+L 
Sbjct: 171 NQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L  +P  + +  +L   N+    L++L    +  L ++ ++ L  N+ T
Sbjct: 231 NLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKE-IEQLQNLKSLDLRSNQLT 289

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P     Q  ++ ++N   NQ+  +P GI  + KNL  +++  N LT+LP ++G    L
Sbjct: 290 TFPK-EIGQLKNLQTLNLGSNQLTTLPEGI-GQLKNLQTLDLDSNQLTTLPQEIGQLQNL 347

Query: 406 TELNLGTNQIS 416
            EL L  NQ+S
Sbjct: 348 QELFLNNNQLS 358



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 173/326 (53%), Gaps = 25/326 (7%)

Query: 252 EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN 311
           ++L K + N   +  LDL  N    +P  +G L NL  L L+ N+L  +P+ + +  +L 
Sbjct: 36  QDLTKALQNPLKVRILDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 95

Query: 312 EFNVEGCALSSLPDGL----------------------LSSLTSINNITLSRNKFTAYPS 349
           + N+    + ++P  +                      +  L  +  + L +N+ T  P 
Sbjct: 96  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ 155

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
               Q  ++ S+N  +NQI  IP  I  + + L  + + +N LT+LP ++G    L  L+
Sbjct: 156 -EIGQLKNLKSLNLSYNQIKTIPKEI-EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLD 213

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           L TN+++ L ++I +L NL+ L L +N L  LP+ IG L+ L+ L+L  N+L +L  EI 
Sbjct: 214 LSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIE 273

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            L+ L+ L L+SNQL + P+ IG L NL  L++G N L ++PE IG L+NL TL L+ N 
Sbjct: 274 QLQNLKSLDLRSNQLTTFPKEIGQLKNLQTLNLGSNQLTTLPEGIGQLKNLQTLDLDSNQ 333

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLS 555
            L  +P E+    NLQ + L+N  LS
Sbjct: 334 -LTTLPQEIGQLQNLQELFLNNNQLS 358



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/249 (34%), Positives = 139/249 (55%), Gaps = 1/249 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS + I  +P  +EKL  L+ LYL  N+L +LP +IG +  L  L L +N LT
Sbjct: 92  KNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT 151

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L+ L+L +N++  +P  + KL  L+ L L  N++ T+  +I  L NL  
Sbjct: 152 TLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQS 211

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G L+NL  L L  N L  LP EIG    L TL+L++N L  +   
Sbjct: 212 LDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKE 271

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  N+L + P+ + +  +L   N+    L++LP+G +  L ++  + L 
Sbjct: 272 IEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQTLNLGSNQLTTLPEG-IGQLKNLQTLDLD 330

Query: 341 RNKFTAYPS 349
            N+ T  P 
Sbjct: 331 SNQLTTLPQ 339



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/212 (41%), Positives = 127/212 (59%), Gaps = 5/212 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L+LS + I  +P  +EKL  L+ L L  N+L +LP +IG + NL  L L+ N LT
Sbjct: 161 KNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLT 220

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  + +LQ L+ L L  N+L  LP  + +L +L+ L LR NR+ T+  +I+ L NL  
Sbjct: 221 TLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKS 280

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +R N++   P E+G+LKNL TL+L  N L  LP+ IG    L TLDL  N+L  +P  
Sbjct: 281 LDLRSNQLTTFPKEIGQLKNLQTLNLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 340

Query: 281 LGNLINLTRLRLSYNRLES-----VPETLSKC 307
           +G L NL  L L+ N+L S     + + L KC
Sbjct: 341 IGQLQNLQELFLNNNQLSSQEKKRIRKLLPKC 372



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 126/217 (58%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L K+ +T LP  + +L +L+ L L  N++ ++P +I  +  L  LGL  N LT+LP  
Sbjct: 143 LYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQE 202

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ LDL  N+L  LP  +  L +L+ LYL  N++  +  +I  L NL  L++R+
Sbjct: 203 IGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 262

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  L  E+ +L+NL +LDL  N L   PKEIG    L TL+L  N+L  +P+ +G L 
Sbjct: 263 NRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQTLNLGSNQLTTLPEGIGQLK 322

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           NL  L L  N+L ++P+ + +  +L E  +    LSS
Sbjct: 323 NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 359



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 106/177 (59%), Gaps = 1/177 (0%)

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
           +++  N   +LP ++G    L ELNL  NQ++ L ++I  L NL  L LS N +K +P  
Sbjct: 51  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 110

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
           I  L+KL+ L L  N+L +LP EIG L++LQ L L  NQL +LP+ IG L NL  L++  
Sbjct: 111 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 170

Query: 505 NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N +++IP+EI  L+ L +L L DN  L  +P E+    NLQ + L    L+ +P EI
Sbjct: 171 NQIKTIPKEIEKLQKLQSLGL-DNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 226



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 106/176 (60%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K + + +L L  + +T LP  + +L +L+ L L  N+L +LP +IG++ NL  L L  N 
Sbjct: 182 KLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQ 241

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT LP+ +  L+ L+ L+LR+N+L  L   + +L +LK L LR N++ T   +I  L NL
Sbjct: 242 LTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNL 301

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
             L++  N++  LP  +G+LKNL TLDL  N L  LP+EIG    L  L L +N+L
Sbjct: 302 QTLNLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 357



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 92/167 (55%), Gaps = 24/167 (14%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK----- 472
           L++ +QN + + +L LS N  K LP  IG L+ L+ L+L +N+L  LP EIG LK     
Sbjct: 38  LTKALQNPLKVRILDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKL 97

Query: 473 ------------------ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
                             +LQ L L +NQL +LP+ IG L  L +L + +N L ++P+EI
Sbjct: 98  NLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI 157

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           G L+NL +L L+ N  +  IP E+     LQ + LDN  L+ +P EI
Sbjct: 158 GQLKNLKSLNLSYNQ-IKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI 203


>gi|291223723|ref|XP_002731858.1| PREDICTED: leucine rich repeat containing 40-like, partial
            [Saccoglossus kowalevskii]
          Length = 1212

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 148/469 (31%), Positives = 234/469 (49%), Gaps = 29/469 (6%)

Query: 127  EELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELP 186
            +E+ L    L  LP  I    ++  L L  N L+ LPD + NL QL VLD+  NKL  +P
Sbjct: 732  KEMDLNNQNLEYLPCIISEYGHIKKLNLQNNRLSDLPDEMRNLTQLEVLDVSGNKLENIP 791

Query: 187  MVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDL 246
              +YKLT+L+ L L   RI  V  +I  L+ L +L ++ N I +LPPELG L  L  LDL
Sbjct: 792  PSLYKLTNLQHLILSGTRISIVDSNICNLTKLELLDVKGNVITKLPPELGALDKLEVLDL 851

Query: 247  AHNHLEELPKEIGNCTMLVTLDLQHNELVNIP---------------DMLG----NLINL 287
              N +  LP+E+ +   L  L ++ N +   P               D++G    N  + 
Sbjct: 852  QDNDIHNLPRELTSLKKLTKLCVERNPIEEPPYDICCKGFKAFNHYWDIIGMMEKNGESC 911

Query: 288  TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
              + LS  +L  +P  +S+  HL + N+    LS+LP+  +  LT +  + LSRNKF   
Sbjct: 912  EEMDLSSKQLVYIPSMISQYTHLKKLNLHNNYLSALPEE-VGKLTDLEELNLSRNKFPEL 970

Query: 348  PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
            PS      + +  ++   NQ+  +     S   N+ +V++  N ++ +  +      LT+
Sbjct: 971  PS-IILNLSKLSMLDVSDNQLSVVS----SDIGNIKEVDLSHNSISIITNETNHSYKLTK 1025

Query: 408  LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
            L++  N+++   E++     L+ L +S N +K +   I  L  L  L++E N ++ +P E
Sbjct: 1026 LDVSKNRLTSFRENVGMFEKLQQLNISINEIKSI-DGIHQLCMLTYLNIENNPIKQIPQE 1084

Query: 468  IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
            I  LK L  L   +N L +LP +I HL  L  + +  N +  IP+EI +LE L TL L  
Sbjct: 1085 ISKLKTLTVLKASNNYLTALPSSIAHLVELLDVDLSHNEVTRIPKEIESLEKLTTLNLCS 1144

Query: 528  NTCLNNIPFELALCSNLQIMSLDNCP--LSQIPSEIVVGGPSLIIRYLK 574
            N  L ++P EL     L+ + LD  P  +  +PS I + G   I RY +
Sbjct: 1145 NK-LESLPRELGQLPALKDIRLDGNPDYIGDVPSAIYLHGIDKIKRYWR 1192



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 247/519 (47%), Gaps = 44/519 (8%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE 156
           + K+   + +DL    +T++P ++ +  H++++ L GN L++LP ++  +  L  + L+ 
Sbjct: 205 KYKDTTCIEIDLRDKGLTYIPATIGQYGHIKKIRLSGNNLSTLPDEVKDMEQLQEIDLSC 264

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N L   P SL  L +L VLDL  N +  LP  +  L+ L+ L +  N I  +   +  ++
Sbjct: 265 NKLVHFPPSLMKLTRLSVLDLSENAMTSLPNEICSLSHLQKLNISGNNIGVLPLAMGEMT 324

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI------------GNCTML 264
            L+ L MR   I  LPPELG + NL  LDL  NH+  +P+E+            GN    
Sbjct: 325 ELTSLEMRRIGIEFLPPELGNVSNLEVLDLTGNHITSIPRELKKLSKLKELIIDGNSITE 384

Query: 265 VTLD-----LQHNELVNIPDMLGNLINLTRLRLSYN--RLESVPETLSKCVHLNEFNVEG 317
             +D         +   I +ML    + +R+ +++   RL  +P  +    H+ +  + G
Sbjct: 385 PPMDKCGSVADFRQYWQIIEMLEEYQDESRVEMNFTGRRLFYLPNCIGDYKHIKKLRLSG 444

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             L++LPD +      ++ + LS NK    P     Q T++  +N   N I  I   I  
Sbjct: 445 NELTTLPDEMKYMSEELDELDLSCNKLDEIPR-CVLQLTNLTYLNLNGNVIHNISPDI-K 502

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN---------------------QIS 416
           R + L  +++  N +  L  +L     L  L +G N                     QI 
Sbjct: 503 RLRKLQTLDLNGNKVMRLIRELAELPILETLQVGGNPIEEPPLTICEKGVPEFKQYWQII 562

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
            + E  ++  +L+ + LS N    LP+S+G  R +K + L  NKL  LP  I  L +L+ 
Sbjct: 563 GMLEKYKD-TSLDEMNLSGNGFICLPASVGEYRHIKKIILGGNKLSELPETISELTQLEI 621

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
           L L  N+L  +P ++  L+NLS+L +  N +  IP  IG+L+ L TL +++N CL+ +P 
Sbjct: 622 LDLSHNKLKEIPSSLFDLSNLSHLDIRGNQISLIPPNIGSLQRLETLDVSEN-CLSTLPR 680

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKM 575
           E+   +NL+I+ +    +   P +I   G     RY ++
Sbjct: 681 EIKDLTNLKILDIGGNDIKCPPMDICSKGVDAFKRYWQI 719



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 148/494 (29%), Positives = 232/494 (46%), Gaps = 51/494 (10%)

Query: 128 ELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANL-QQLRVLDLRHNKLNELP 186
           E+   G +L  LP+ IG   ++  L L+ N LT+LPD +  + ++L  LDL  NKL+E+P
Sbjct: 416 EMNFTGRRLFYLPNCIGDYKHIKKLRLSGNELTTLPDEMKYMSEELDELDLSCNKLDEIP 475

Query: 187 MVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDL 246
             V +LT+L  L L  N I  + PDI+ L  L  L +  NK+  L  EL EL  L TL +
Sbjct: 476 RCVLQLTNLTYLNLNGNVIHNISPDIKRLRKLQTLDLNGNKVMRLIRELAELPILETLQV 535

Query: 247 AHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK 306
             N +EE P  I  C   V    Q+ +++ + +   +  +L  + LS N    +P ++ +
Sbjct: 536 GGNPIEEPPLTI--CEKGVPEFKQYWQIIGMLEKYKD-TSLDEMNLSGNGFICLPASVGE 592

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
             H+ +  + G  LS LP+ + S LT +  + LS NK    PS      +++  ++   N
Sbjct: 593 YRHIKKIILGGNKLSELPETI-SELTQLEILDLSHNKLKEIPSS-LFDLSNLSHLDIRGN 650

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI---- 422
           QI  IP  I S  + L  +++ +N L++LP ++     L  L++G N I     DI    
Sbjct: 651 QISLIPPNIGSLQR-LETLDVSENCLSTLPREIKDLTNLKILDIGGNDIKCPPMDICSKG 709

Query: 423 -----------------------------QNLVNLEVLV----------LSNNLLKKLPS 443
                                        QNL  L  ++          L NN L  LP 
Sbjct: 710 VDAFKRYWQIIELMEKSKNKDNKEMDLNNQNLEYLPCIISEYGHIKKLNLQNNRLSDLPD 769

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
            + NL +L+ LD+  NKLE++P  +  L  LQ LIL   ++  +   I +LT L  L V 
Sbjct: 770 EMRNLTQLEVLDVSGNKLENIPPSLYKLTNLQHLILSGTRISIVDSNICNLTKLELLDVK 829

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVV 563
            N +  +P E+G L+ L  L L DN  ++N+P EL     L  + ++  P+ + P +I  
Sbjct: 830 GNVITKLPPELGALDKLEVLDLQDND-IHNLPRELTSLKKLTKLCVERNPIEEPPYDICC 888

Query: 564 GGPSLIIRYLKMQG 577
            G      Y  + G
Sbjct: 889 KGFKAFNHYWDIIG 902



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 148/514 (28%), Positives = 236/514 (45%), Gaps = 64/514 (12%)

Query: 108  LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
            L  + ++ LP ++ +LT LE L L  NKL  +PS +  ++NL+ L +  N ++ +P ++ 
Sbjct: 601  LGGNKLSELPETISELTQLEILDLSHNKLKEIPSSLFDLSNLSHLDIRGNQISLIPPNIG 660

Query: 168  NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI---------QYLSNL 218
            +LQ+L  LD+  N L+ LP  +  LT+LKIL +  N IK    DI         +Y   +
Sbjct: 661  SLQRLETLDVSENCLSTLPREIKDLTNLKILDIGGNDIKCPPMDICSKGVDAFKRYWQII 720

Query: 219  SMLSMRDNK-----------IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
             ++    NK           +  LP  + E  ++  L+L +N L +LP E+ N T L  L
Sbjct: 721  ELMEKSKNKDNKEMDLNNQNLEYLPCIISEYGHIKKLNLQNNRLSDLPDEMRNLTQLEVL 780

Query: 268  DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
            D+  N+L NIP  L  L NL  L LS  R+  V   +     L   +V+G  ++ LP  L
Sbjct: 781  DVSGNKLENIPPSLYKLTNLQHLILSGTRISIVDSNICNLTKLELLDVKGNVITKLPPEL 840

Query: 328  LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA-------- 379
              +L  +  + L  N     P    T    +  +  E N I++ PY I  +         
Sbjct: 841  -GALDKLEVLDLQDNDIHNLPRE-LTSLKKLTKLCVERNPIEEPPYDICCKGFKAFNHYW 898

Query: 380  ----------KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
                      ++  ++++    L  +P  +  +  L +LNL  N +S L E++  L +LE
Sbjct: 899  DIIGMMEKNGESCEEMDLSSKQLVYIPSMISQYTHLKKLNLHNNYLSALPEEVGKLTDLE 958

Query: 430  VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR 489
             L LS N   +LPS I NL KL  LD+ +N+L  + ++IG +KE+    L  N +  +  
Sbjct: 959  ELNLSRNKFPELPSIILNLSKLSMLDVSDNQLSVVSSDIGNIKEVD---LSHNSISIITN 1015

Query: 490  AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL--------------------YLN-DN 528
               H   L+ L V +N L S  E +G  E L  L                    YLN +N
Sbjct: 1016 ETNHSYKLTKLDVSKNRLTSFRENVGMFEKLQQLNISINEIKSIDGIHQLCMLTYLNIEN 1075

Query: 529  TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
              +  IP E++    L ++   N  L+ +PS I 
Sbjct: 1076 NPIKQIPQEISKLKTLTVLKASNNYLTALPSSIA 1109



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 143/547 (26%), Positives = 250/547 (45%), Gaps = 77/547 (14%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLP----------------- 140
           C+  ++  + L  + +T  P  ++ LT LEEL + GN+L  +P                 
Sbjct: 27  CEYNHVTKIRLDDNKLTTFP-DIKSLTQLEELSVSGNELKEIPMCVYELVNLVLLNLNDN 85

Query: 141 ------SQIGYVTNLTCLGLAENSLTSLPD-----------------------SLANLQQ 171
                 S+IG ++ L CL +  N L+S+PD                       SL NL++
Sbjct: 86  NIKSMSSKIGKLSQLKCLQMKGNDLSSVPDEISELLSLQSLELSNNSMLQVPTSLGNLKE 145

Query: 172 LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD--------IQYLSNLSML-- 221
           L+VLDL+ N +  LP  +  +  L+ L ++ N I+   PD         +Y   + +L  
Sbjct: 146 LKVLDLQDNNIRVLPRQLKDIELLEDLLVKNNPIEDPPPDRCSGVEEFRRYWELVEILEK 205

Query: 222 ---------SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
                     +RD  +  +P  +G+  ++  + L+ N+L  LP E+ +   L  +DL  N
Sbjct: 206 YKDTTCIEIDLRDKGLTYIPATIGQYGHIKKIRLSGNNLSTLPDEVKDMEQLQEIDLSCN 265

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
           +LV+ P  L  L  L+ L LS N + S+P  +    HL + N+ G  +  LP   +  +T
Sbjct: 266 KLVHFPPSLMKLTRLSVLDLSENAMTSLPNEICSLSHLQKLNISGNNIGVLPLA-MGEMT 324

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            + ++ + R      P       +++  ++   N I  IP  +   +K    + +  N +
Sbjct: 325 ELTSLEMRRIGIEFLPP-ELGNVSNLEVLDLTGNHITSIPRELKKLSKLKELI-IDGNSI 382

Query: 393 TSLPLD-LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           T  P+D  G+     +      QI ++ E+ Q+   +E+      L   LP+ IG+ + +
Sbjct: 383 TEPPMDKCGSVADFRQY----WQIIEMLEEYQDESRVEMNFTGRRLF-YLPNCIGDYKHI 437

Query: 452 KCLDLEENKLESLPNEIGFL-KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           K L L  N+L +LP+E+ ++ +EL  L L  N+L  +PR +  LTNL+YL++  N + +I
Sbjct: 438 KKLRLSGNELTTLPDEMKYMSEELDELDLSCNKLDEIPRCVLQLTNLTYLNLNGNVIHNI 497

Query: 511 PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLII 570
             +I  L  L TL LN N  +  I  ELA    L+ + +   P+ + P  I   G     
Sbjct: 498 SPDIKRLRKLQTLDLNGNKVMRLI-RELAELPILETLQVGGNPIEEPPLTICEKGVPEFK 556

Query: 571 RYLKMQG 577
           +Y ++ G
Sbjct: 557 QYWQIIG 563


>gi|418740905|ref|ZP_13297281.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410751500|gb|EKR08477.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 400

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/357 (35%), Positives = 191/357 (53%), Gaps = 26/357 (7%)

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           + T L  +L N   +RVLDL   KL  LP  + +L +L++L L  N++ T+  +I  L N
Sbjct: 34  AYTDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKN 93

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L++  N++  LP E+G+L+N  TL L+ N L  LPKEIG    L  L L  N+    
Sbjct: 94  LQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAF 153

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  +G L NL +L L  N+L+++P  + +  +L E ++    L +L              
Sbjct: 154 PKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTL-------------- 199

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
                      S    Q  ++  ++   NQ+  +P  I  + KNL  +++ +N   ++P 
Sbjct: 200 -----------SAEIGQLQNLQVLDLNDNQLKTLPKEI-GQLKNLQVLDLNNNQFKTVPE 247

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++G    L  L+LG NQ   +SE+I  L NL++L L+NN LK L + IG L+ L+ L L 
Sbjct: 248 EIGQLKNLQVLDLGYNQFKTVSEEIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLN 307

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            N+L +LPNEI  LK L+ L L  NQL +L   IG L NL  LS+ +N L ++P+EI
Sbjct: 308 ANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 121/345 (35%), Positives = 190/345 (55%), Gaps = 27/345 (7%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L + + K++ LP E+G+L+NL  L+L +N L  LPKEIG    L  L+L  N+L  
Sbjct: 47  DVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLTT 106

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P+ +G L N   L LS NRL ++P+ + +  +L E                        
Sbjct: 107 LPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRE------------------------ 142

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L+ N+FTA+P     Q  ++  +N   NQ+  +P  I  + +NL ++++  N L +L 
Sbjct: 143 LYLNTNQFTAFPKE-IGQLKNLQQLNLYANQLKTLPNEI-GQLQNLRELHLSYNQLKTLS 200

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  L+L  NQ+  L ++I  L NL+VL L+NN  K +P  IG L+ L+ LDL
Sbjct: 201 AEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDL 260

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+ +++  EIG LK LQ L L +NQL +L   IG L NL  LS+  N L ++P EI  
Sbjct: 261 GYNQFKTVSEEIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTTLPNEIRQ 320

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+NL  L+L+ N  L  +  E+    NL+ +SL +  L+ +P EI
Sbjct: 321 LKNLRELHLSYNQ-LKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 166/314 (52%), Gaps = 26/314 (8%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + +L +L+ L L  N+LA+LP +IG + NL  L L  N LT+LP+ 
Sbjct: 51  LDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLTTLPEE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ  + L L  N+L  LP  + +L +L+ LYL  N+      +I  L NL  L++  
Sbjct: 111 IGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYA 170

Query: 226 NKIRELP-----------------------PELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N+++ LP                        E+G+L+NL  LDL  N L+ LPKEIG   
Sbjct: 171 NQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLK 230

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  LDL +N+   +P+ +G L NL  L L YN+ ++V E + +  +L    +    L +
Sbjct: 231 NLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVSEEIGQLKNLQMLFLNNNQLKT 290

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           L    +  L ++  ++L+ N+ T  P+    Q  ++  ++  +NQ+  +   I  + KNL
Sbjct: 291 L-SAEIGQLKNLQMLSLNANQLTTLPN-EIRQLKNLRELHLSYNQLKTLSAEI-GQLKNL 347

Query: 383 SKVNMKDNLLTSLP 396
            K++++DN LT+LP
Sbjct: 348 KKLSLRDNQLTTLP 361



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 141/248 (56%), Gaps = 1/248 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N   L LSK+ +T LP  + +L +L ELYL  N+  + P +IG + NL  L L  N L 
Sbjct: 115 QNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLK 174

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ LR L L +N+L  L   + +L +L++L L  N++KT+  +I  L NL +
Sbjct: 175 TLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQV 234

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N+ + +P E+G+LKNL  LDL +N  + + +EIG    L  L L +N+L  +   
Sbjct: 235 LDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVSEEIGQLKNLQMLFLNNNQLKTLSAE 294

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L+ N+L ++P  + +  +L E ++    L +L    +  L ++  ++L 
Sbjct: 295 IGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTL-SAEIGQLKNLKKLSLR 353

Query: 341 RNKFTAYP 348
            N+ T  P
Sbjct: 354 DNQLTTLP 361



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 7/166 (4%)

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           PLD+        L+L   ++  L ++I  L NL+VL L+NN L  LP  IG L+ L+ L+
Sbjct: 45  PLDVRV------LDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQWLN 98

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L  N+L +LP EIG L+  Q L+L  N+L +LP+ IG L NL  L +  N   + P+EIG
Sbjct: 99  LVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIG 158

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L+NL  L L  N  L  +P E+    NL+ + L    L  + +EI
Sbjct: 159 QLKNLQQLNLYANQ-LKTLPNEIGQLQNLRELHLSYNQLKTLSAEI 203



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 80/135 (59%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL+ +    +P  + +L +L+ L L  N+  ++  +IG + NL  L L  N L 
Sbjct: 230 KNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVSEEIGQLKNLQMLFLNNNQLK 289

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +L   +  L+ L++L L  N+L  LP  + +L +L+ L+L +N++KT+  +I  L NL  
Sbjct: 290 TLSAEIGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKK 349

Query: 221 LSMRDNKIRELPPEL 235
           LS+RDN++  LP E+
Sbjct: 350 LSLRDNQLTTLPKEI 364


>gi|456823237|gb|EMF71707.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 391

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/313 (37%), Positives = 180/313 (57%), Gaps = 4/313 (1%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLDL+ N  + LPKEIG    L  L+L  N+L  +P  +G L NL +L LS N+++++P+
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + K   L    +    L++LP  +   L  +  + L +N+ T  P     Q  ++ S+N
Sbjct: 112 EIEKLQKLQSLYLPNNQLTTLPQEI-GQLQKLQWLYLPKNQLTTLPQE-IGQLKNLKSLN 169

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQI  IP  I  + + L  + + +N LT+LP ++G    L  L+L TN+++ L ++I
Sbjct: 170 LSYNQIKTIPKEI-EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 228

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            +L NL+ L L +N L  LP+ IG L+ L+ L+L  N+L +L  EI  L+ L+ L L+SN
Sbjct: 229 GHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 288

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL   P+ IG L NL  L +G N L ++PE IG L+NL TL L+ N  L  +P E+    
Sbjct: 289 QLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQ-LTTLPQEIGQLQ 347

Query: 543 NLQIMSLDNCPLS 555
           NLQ + L+N  LS
Sbjct: 348 NLQELFLNNNQLS 360



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/369 (34%), Positives = 193/369 (52%), Gaps = 30/369 (8%)

Query: 145 YVTNLTCLGLAENS----LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           ++ +L+C   AE S     T L  +L N  ++R LDL  N+   LP  + KL +L+ L L
Sbjct: 19  FLIHLSCEIQAEESESGTYTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNL 78

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
             N++  +  +I  L NL  L++  N+I+ +P E+ +L+ L +L L +N L  LP+EIG 
Sbjct: 79  NKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQ 138

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  L L  N+L  +P  +G L NL  L LSYN+++++P+ + K   L    ++   L
Sbjct: 139 LQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQL 198

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
           ++LP  +   L ++ ++ LS N+ T  P                               +
Sbjct: 199 TTLPQEI-GQLQNLQSLDLSTNRLTTLPQE-------------------------IGHLQ 232

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           NL  + +  N LT LP ++G    L  LNL  N+++ LS++I+ L NL+ L L +N L  
Sbjct: 233 NLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTI 292

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
            P  IG L+ L+ LDL  N+L +LP  IG LK LQ L L SNQL +LP+ IG L NL  L
Sbjct: 293 FPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQEL 352

Query: 501 SVGENNLQS 509
            +  N L S
Sbjct: 353 FLNNNQLSS 361



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/310 (38%), Positives = 172/310 (55%), Gaps = 7/310 (2%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+ + LP E+G+LKNL  L+L  N L  LPKEIG    L  L+L  N++  IP  
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNIT 338
           +  L  L  L L  N+L ++P+ + +   L    +    L++LP   G L +L S+N   
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLN--- 169

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           LS N+    P     +   + S+  ++NQ+  +P  I  + +NL  +++  N LT+LP +
Sbjct: 170 LSYNQIKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEI-GQLQNLQSLDLSTNRLTTLPQE 227

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L +L L +NQ++ L  +I  L NL+ L L NN L  L   I  L+ LK LDL  
Sbjct: 228 IGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRS 287

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L   P EIG LK LQ L L SNQL +LP  IG L NL  L +  N L ++P+EIG L+
Sbjct: 288 NQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQ 347

Query: 519 NLHTLYLNDN 528
           NL  L+LN+N
Sbjct: 348 NLQELFLNNN 357



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 186/353 (52%), Gaps = 26/353 (7%)

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
            + T L  +++    +  L L  N+  +LP +IG + NL  L L +N LT LP  +  L+
Sbjct: 35  GTYTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLK 94

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
            LR L+L  N++  +P  + KL  L+ LYL  N++ T+  +I  L  L  L +  N++  
Sbjct: 95  NLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTT 154

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+G+LKNL +L+L++N ++ +PKEI     L +L L +N+L  +P  +G L NL  L
Sbjct: 155 LPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 214

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            LS NRL ++P+ +    +L +  +    L+ LP+ +                       
Sbjct: 215 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI----------------------- 251

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              Q  ++ ++N  +N++  +   I  + +NL  ++++ N LT  P ++G    L  L+L
Sbjct: 252 --GQLKNLQTLNLRNNRLTTLSKEI-EQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDL 308

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           G+NQ++ L E I  L NL+ L L +N L  LP  IG L+ L+ L L  N+L S
Sbjct: 309 GSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 361



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/311 (34%), Positives = 174/311 (55%), Gaps = 3/311 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS +    LP  + KL +L+EL L  N+L  LP +IG + NL  L L+ N + ++P  
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L+ L L +N+L  LP  + +L  L+ LYL  N++ T+  +I  L NL  L++  
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I+ +P E+ +L+ L +L L +N L  LP+EIG    L +LDL  N L  +P  +G+L 
Sbjct: 173 NQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L  +P  + +  +L   N+    L++L    +  L ++ ++ L  N+ T
Sbjct: 233 NLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKE-IEQLQNLKSLDLRSNQLT 291

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P     Q  ++  ++   NQ+  +P GI  + KNL  +++  N LT+LP ++G    L
Sbjct: 292 IFPK-EIGQLKNLQVLDLGSNQLTTLPEGI-GQLKNLQTLDLDSNQLTTLPQEIGQLQNL 349

Query: 406 TELNLGTNQIS 416
            EL L  NQ+S
Sbjct: 350 QELFLNNNQLS 360



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/199 (42%), Positives = 121/199 (60%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L+LS + I  +P  +EKL  L+ L L  N+L +LP +IG + NL  L L+ N LT
Sbjct: 163 KNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLT 222

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  + +LQ L+ L L  N+L  LP  + +L +L+ L LR NR+ T+  +I+ L NL  
Sbjct: 223 TLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKS 282

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +R N++   P E+G+LKNL  LDL  N L  LP+ IG    L TLDL  N+L  +P  
Sbjct: 283 LDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 342

Query: 281 LGNLINLTRLRLSYNRLES 299
           +G L NL  L L+ N+L S
Sbjct: 343 IGQLQNLQELFLNNNQLSS 361



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 125/217 (57%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L K+ +T LP  + +L +L+ L L  N++ ++P +I  +  L  LGL  N LT+LP  
Sbjct: 145 LYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQE 204

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ LDL  N+L  LP  +  L +L+ LYL  N++  +  +I  L NL  L++R+
Sbjct: 205 IGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 264

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  L  E+ +L+NL +LDL  N L   PKEIG    L  LDL  N+L  +P+ +G L 
Sbjct: 265 NRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLK 324

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           NL  L L  N+L ++P+ + +  +L E  +    LSS
Sbjct: 325 NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 361



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 106/177 (59%), Gaps = 1/177 (0%)

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
           +++  N   +LP ++G    L ELNL  NQ++ L ++I  L NL  L LS N +K +P  
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
           I  L+KL+ L L  N+L +LP EIG L++LQ L L  NQL +LP+ IG L NL  L++  
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 172

Query: 505 NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N +++IP+EI  L+ L +L L DN  L  +P E+    NLQ + L    L+ +P EI
Sbjct: 173 NQIKTIPKEIEKLQKLQSLGL-DNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 228



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 92/169 (54%), Gaps = 24/169 (14%)

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK--- 472
           + L++ +QN + +  L LS N  K LP  IG L+ L+ L+L +N+L  LP EIG LK   
Sbjct: 38  TDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 97

Query: 473 --------------------ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
                               +LQ L L +NQL +LP+ IG L  L +L + +N L ++P+
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ 157

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           EIG L+NL +L L+ N  +  IP E+     LQ + LDN  L+ +P EI
Sbjct: 158 EIGQLKNLKSLNLSYNQ-IKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI 205


>gi|418698141|ref|ZP_13259120.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762845|gb|EKR29004.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 447

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 146/430 (33%), Positives = 234/430 (54%), Gaps = 11/430 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +DLS+      P  + +L +LE L L  N++  LP +I  + NL  L L  N LT +P  
Sbjct: 1   MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L +L L +N+++ LP  + K  +L+ L LR NR+ T+  +I  L  L  L++ +
Sbjct: 61  IWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLEN 120

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I+ LP E+G L+NL   +L+ N L  +PKEIGN   L  L L++N+L  +P  +  L 
Sbjct: 121 NRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQ 180

Query: 286 NLTRLRLSYNRL-----ESVPETLSKC-VHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
           +L  L L  N L     + +   L  C + L +   EG    +L   L   L  I +++L
Sbjct: 181 DLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVE-EGRTYRNLNLALEQPL-KILSLSL 238

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
              +F+ +P     +  ++ S++     +  +P  I  R K+L ++++  N L SLP ++
Sbjct: 239 EYQEFSLFPKEI-LRLKNLRSLSLYDTSLVALPKEIV-RLKHLERLSLGLNQLKSLPKEI 296

Query: 400 GTWVGLTELNLGT-NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           G    L  L++G  N+   L ++I  L NL  L+L+ N  K  P  I  L+KL  L++  
Sbjct: 297 GLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNT 356

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L++LP +IG LK LQ L L  N+L +LP  IG L NL+ L +  N ++++PEEI  L+
Sbjct: 357 NQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQ 416

Query: 519 NLHTLYLNDN 528
           NL  L L +N
Sbjct: 417 NLRKLTLYEN 426



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 148/424 (34%), Positives = 222/424 (52%), Gaps = 6/424 (1%)

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           K A  P +I  +  L  L L EN +T LP  +  L+ L+ L L  NKL  +P  +++L +
Sbjct: 7   KFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKEIWELEN 66

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L IL L  NRI T+  +I+   NL  L++R N++  LP E+GELK L  L+L +N ++ L
Sbjct: 67  LTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKIL 126

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P EIG    L   +L  N+L +IP  +GNL NL  L L  N+L+++P  + K   L   N
Sbjct: 127 PNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLN 186

Query: 315 VEGCALSSLPDGLLSSLTSINNITL---SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
           +    L S     + +L    NI L      +     +    Q   + S++ E+ +    
Sbjct: 187 LLINPLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLNLALEQPLKILSLSLEYQEFSLF 246

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  R KNL  +++ D  L +LP ++     L  L+LG NQ+  L ++I  L NL  L
Sbjct: 247 PKEIL-RLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSL 305

Query: 432 -VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA 490
            + +NN  + LP  I  L+ L+ L L +N+ +  P EI  LK+L  L + +NQL +LP  
Sbjct: 306 DIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEK 365

Query: 491 IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLD 550
           IG L  L  L +  N L ++P EIG L NL  LYL  N  +  +P E+A   NL+ ++L 
Sbjct: 366 IGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNR-IKTLPEEIARLQNLRKLTLY 424

Query: 551 NCPL 554
             P+
Sbjct: 425 ENPI 428



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 185/384 (48%), Gaps = 42/384 (10%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGY--------------- 145
           EN+  L L  + I+ LP  +EK  +L+EL L GN+L +LP +IG                
Sbjct: 65  ENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIK 124

Query: 146 --------VTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
                   + NL    L+ N L S+P  + NLQ LR+L L +N+L  LP  + KL  L++
Sbjct: 125 ILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 184

Query: 198 LYLRFN--------RIKTVHPDIQYLSNLSMLSMRDNKI-RELPPELGELKNLVTLDLAH 248
           L L  N        +I+ + P+     N+ +  + + +  R L   L +   +++L L +
Sbjct: 185 LNLLINPLLSEERKKIQALLPN----CNIDLRDVEEGRTYRNLNLALEQPLKILSLSLEY 240

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
                 PKEI     L +L L    LV +P  +  L +L RL L  N+L+S+P+ +    
Sbjct: 241 QEFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLR 300

Query: 309 HLNEFNVEG-CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQ 367
           +L   ++        LP   ++ L ++ ++ L++N+F  +P     +   +  +N   NQ
Sbjct: 301 NLRSLDIGANNEFEVLPKE-IARLQNLRSLLLNQNRFKIFPKEI-WELKKLVILNVNTNQ 358

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
           +D +P  I  R K L  +++  N LT+LP ++G    LTEL L  N+I  L E+I  L N
Sbjct: 359 LDALPEKI-GRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQN 417

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKL 451
           L  L L  N +   P  +  +RKL
Sbjct: 418 LRKLTLYENPIP--PQELDKIRKL 439



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 163/346 (47%), Gaps = 31/346 (8%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           +DL+       PKEI     L  L L+ N +  +P  +  L NL  L L+ N+L  VP+ 
Sbjct: 1   MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           + +  +L    +E   +S+LP  +  S  ++  + L  N+    P G   +   +  +N 
Sbjct: 61  IWELENLTILRLENNRISTLPKEIEKS-KNLQELNLRGNRLVTLP-GEIGELKLLEELNL 118

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
           E+N+I  +P  I +  +NL   N+  N L S+P ++G    L  L L  NQ+  L   ++
Sbjct: 119 ENNRIKILPNEIGA-LENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQME 177

Query: 424 NLVNLEVL-VLSNNLLKK--------LPSSIGNLR-------------------KLKCLD 455
            L +LEVL +L N LL +        LP+   +LR                   K+  L 
Sbjct: 178 KLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLNLALEQPLKILSLS 237

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           LE  +    P EI  LK L+ L L    LV+LP+ I  L +L  LS+G N L+S+P+EIG
Sbjct: 238 LEYQEFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIG 297

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L NL +L +  N     +P E+A   NL+ + L+       P EI
Sbjct: 298 LLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI 343



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 127/276 (46%), Gaps = 52/276 (18%)

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + LSR KF  +P     +   +  +  E N+I  +P  I ++ KNL ++ +  N LT +P
Sbjct: 1   MDLSRQKFAVFPKEI-WELEYLEILKLEENRITVLPREI-NKLKNLKELYLNGNKLTIVP 58

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++     LT L L  N+IS L ++I+   NL+ L L  N L  LP  IG L+ L+ L+L
Sbjct: 59  KEIWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNL 118

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
           E N+++ LPNEIG L+ L    L  N+L S+P+ IG+L NL  L +  N L+++P ++  
Sbjct: 119 ENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEK 178

Query: 517 LENLHTL----------------------------------YLNDNTCLNN--------- 533
           L++L  L                                  Y N N  L           
Sbjct: 179 LQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLNLALEQPLKILSLSL 238

Query: 534 -------IPFELALCSNLQIMSLDNCPLSQIPSEIV 562
                   P E+    NL+ +SL +  L  +P EIV
Sbjct: 239 EYQEFSLFPKEILRLKNLRSLSLYDTSLVALPKEIV 274


>gi|455791562|gb|EMF43369.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 380

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/313 (37%), Positives = 177/313 (56%), Gaps = 4/313 (1%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLDL+ N  + LPKEIG    L  L+L  N+L  +P  +G L NL +L LS N+++++P+
Sbjct: 53  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 112

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + K   L    +    L++LP  +   L  +  + L +N+ T  P     Q  ++ S+N
Sbjct: 113 EIEKLQKLQSLYLPKNQLTTLPQEI-GQLQKLQWLYLPKNQLTTLPQEI-GQLKNLKSLN 170

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQI  IP  I  + + L  + + +N LT+LP ++     L  L LG N+++   ++I
Sbjct: 171 LSYNQIKTIPKEI-EKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEI 229

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
           + L NL++L L +N L  LP  I  L+ L+ LDL  N+L++LP EI  LK LQ L L  N
Sbjct: 230 EQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYN 289

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL  LP+ I  L NL  L +G N L  +P+EIG L+NL  L+LN+N  L  +P E+    
Sbjct: 290 QLTVLPKEIEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNNQ-LTTLPKEIGQLK 348

Query: 543 NLQIMSLDNCPLS 555
           NLQ + L+N  LS
Sbjct: 349 NLQELYLNNNQLS 361



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/310 (38%), Positives = 172/310 (55%), Gaps = 7/310 (2%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+ + LP E+G+LKNL  L+L  N L  LPKEIG    L  L+L  N++  IP  
Sbjct: 54  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 113

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNIT 338
           +  L  L  L L  N+L ++P+ + +   L    +    L++LP   G L +L S+N   
Sbjct: 114 IEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLN--- 170

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           LS N+    P     +   + S+  ++NQ+  +P  I  + KNL  + + +N LT+ P +
Sbjct: 171 LSYNQIKTIPKEI-EKLQKLQSLGLDNNQLTTLPKEI-EQLKNLQTLYLGNNRLTTFPKE 228

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +     L  L L  NQ++ L ++I+ L NL++L LS N LK LP  I  L+ L+ L+L  
Sbjct: 229 IEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGY 288

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L  LP EI  LK LQ L L  NQL  LP+ IG L NL  L +  N L ++P+EIG L+
Sbjct: 289 NQLTVLPKEIEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLK 348

Query: 519 NLHTLYLNDN 528
           NL  LYLN+N
Sbjct: 349 NLQELYLNNN 358



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 124/374 (33%), Positives = 191/374 (51%), Gaps = 32/374 (8%)

Query: 145 YVTNLTCLGLAEN-----SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILY 199
           ++ +L+C   AE      + T L  +L N  ++R LDL  N+   LP  + KL +L+ L 
Sbjct: 19  FLMHLSCEIQAEEFEQQETYTDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELN 78

Query: 200 LRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIG 259
           L  N++  +  +I  L NL  L++  N+I+ +P E+ +L+ L +L L  N L  LP+EIG
Sbjct: 79  LNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPKNQLTTLPQEIG 138

Query: 260 NCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA 319
               L  L L  N+L  +P  +G L NL  L LSYN+++++P+ + K   L    ++   
Sbjct: 139 QLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQ 198

Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           L++LP  +   L ++  + L  N+ T +P                             + 
Sbjct: 199 LTTLPKEI-EQLKNLQTLYLGNNRLTTFPKE-------------------------IEQL 232

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           KNL  + + DN LT LP ++     L  L+L  NQ+  L ++I+ L NL+ L L  N L 
Sbjct: 233 KNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQLT 292

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
            LP  I  L+ L+ L L  N+L  LP EIG L+ L+ L L +NQL +LP+ IG L NL  
Sbjct: 293 VLPKEIEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQE 352

Query: 500 LSVGENNLQSIPEE 513
           L +  N L SI E+
Sbjct: 353 LYLNNNQL-SIEEK 365



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 183/353 (51%), Gaps = 26/353 (7%)

Query: 109 SKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLAN 168
            + + T L  +++    +  L L  N+  +LP +IG + NL  L L +N LT LP  +  
Sbjct: 34  QQETYTDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQ 93

Query: 169 LQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           L+ LR L+L  N++  +P  + KL  L+ LYL  N++ T+  +I  L  L  L +  N++
Sbjct: 94  LKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQL 153

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LP E+G+LKNL +L+L++N ++ +PKEI     L +L L +N+L  +P  +  L NL 
Sbjct: 154 TTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQ 213

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L  NRL + P+ + +  +L    +    L+ LP  +                     
Sbjct: 214 TLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEI--------------------- 252

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                Q  ++  ++  +NQ+  +P  I  + KNL ++N+  N LT LP ++     L  L
Sbjct: 253 ----KQLKNLQLLDLSYNQLKTLPKEI-EQLKNLQELNLGYNQLTVLPKEIEQLKNLQTL 307

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
            LG NQ++ L ++I  L NL+VL L+NN L  LP  IG L+ L+ L L  N+L
Sbjct: 308 YLGYNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQL 360



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/329 (32%), Positives = 174/329 (52%), Gaps = 27/329 (8%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L+L+K+ +T LP  + +L +L +L L  N++ ++P +I  +  L  L L +N 
Sbjct: 70  KLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPKNQ 129

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP  +  LQ+L+ L L  N+L  LP  + +L +LK L L +N+IKT+  +I+ L  L
Sbjct: 130 LTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKL 189

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L + +N++  LP E+ +LKNL TL L +N L   PKEI     L  L L  N+L  +P
Sbjct: 190 QSLGLDNNQLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLP 249

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +  L NL  L LSYN+L+++P+ + +  +L E N+    L+ LP   +  L ++  + 
Sbjct: 250 QEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQLTVLPKE-IEQLKNLQTLY 308

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           L  N+ T  P                             + +NL  + + +N LT+LP +
Sbjct: 309 LGYNQLTVLPKE-------------------------IGQLQNLKVLFLNNNQLTTLPKE 343

Query: 399 LGTWVGLTELNLGTNQIS-KLSEDIQNLV 426
           +G    L EL L  NQ+S +  E IQ L+
Sbjct: 344 IGQLKNLQELYLNNNQLSIEEKERIQKLI 372



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 146/259 (56%), Gaps = 1/259 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L K+ +T LP  + +L  L+ LYL  N+L +LP +IG + NL  L L+ N + ++P  
Sbjct: 123 LYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKE 182

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L+ L L +N+L  LP  + +L +L+ LYL  NR+ T   +I+ L NL +L + D
Sbjct: 183 IEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYD 242

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+ +LKNL  LDL++N L+ LPKEI     L  L+L +N+L  +P  +  L 
Sbjct: 243 NQLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLK 302

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L YN+L  +P+ + +  +L    +    L++LP   +  L ++  + L+ N+ +
Sbjct: 303 NLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKE-IGQLKNLQELYLNNNQLS 361

Query: 346 AYPSGGPTQFTSVYSINFE 364
                   +      I+FE
Sbjct: 362 IEEKERIQKLIPKCQISFE 380



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/205 (39%), Positives = 119/205 (58%), Gaps = 2/205 (0%)

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS 416
            V +++   N+   +P  I  + KNL ++N+  N LT LP ++G    L +LNL  NQI 
Sbjct: 50  KVRTLDLSANRFKTLPKEI-GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIK 108

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
            + ++I+ L  L+ L L  N L  LP  IG L+KL+ L L +N+L +LP EIG LK L+ 
Sbjct: 109 TIPKEIEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKS 168

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
           L L  NQ+ ++P+ I  L  L  L +  N L ++P+EI  L+NL TLYL +N  L   P 
Sbjct: 169 LNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLYLGNNR-LTTFPK 227

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEI 561
           E+    NLQ++ L +  L+ +P EI
Sbjct: 228 EIEQLKNLQLLYLYDNQLTVLPQEI 252



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 87/146 (59%), Gaps = 1/146 (0%)

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           + L++ +QN + +  L LS N  K LP  IG L+ L+ L+L +N+L  LP EIG LK L+
Sbjct: 39  TDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 98

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
           +L L +NQ+ ++P+ I  L  L  L + +N L ++P+EIG L+ L  LYL  N  L  +P
Sbjct: 99  KLNLSANQIKTIPKEIEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQ-LTTLP 157

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEI 561
            E+    NL+ ++L    +  IP EI
Sbjct: 158 QEIGQLKNLKSLNLSYNQIKTIPKEI 183



 Score = 38.5 bits (88), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)

Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
           Q      L +A+ +   +  L +  N  +++P+EIG L+NL  L LN N  L  +P E+ 
Sbjct: 34  QQETYTDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQ-LTILPKEIG 92

Query: 540 LCSNLQIMSLDNCPLSQIPSEI 561
              NL+ ++L    +  IP EI
Sbjct: 93  QLKNLRKLNLSANQIKTIPKEI 114


>gi|345308702|ref|XP_001520661.2| PREDICTED: protein LAP2 [Ornithorhynchus anatinus]
          Length = 1559

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 214/464 (46%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 107 LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 166

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 167 PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 203

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 204 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 263

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  LS +P G L +L  +
Sbjct: 264 KMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLSFIP-GFLGNLKQL 322

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  G+ S  ++L  + +  N L  
Sbjct: 323 TYLDVSKNS------------------------IEMVEEGV-SGCESLQDLLLSSNSLQQ 357

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   LT L +  NQ+  L + I  L+++E L  S N ++  P S+G L  ++  
Sbjct: 358 LPESIGSLKKLTTLKIDENQLMYLPDSIGGLISIEELDCSFNEIEAFPPSVGQLTNIRTF 417

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 418 AADHNFLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 477

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +       Q   L N    Q P
Sbjct: 478 TKLQQLTAMWLSDNQSKPLIPLQKETDPETQKTVLTNYMFPQQP 521



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 186 ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 245

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+ +E+P V+ +L+ LK  ++ 
Sbjct: 246 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMD 305

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   +  L  L+ L +  N I  +   +   ++L  L L+ N L++LP+ IG+ 
Sbjct: 306 GNRLSFIPGFLGNLKQLTYLDVSKNSIEMVEEGVSGCESLQDLLLSSNSLQQLPESIGSL 365

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L TL +  N+L+ +PD +G LI++  L  S+N +E+ P ++ +  ++  F  +   L 
Sbjct: 366 KKLTTLKIDENQLMYLPDSIGGLISIEELDCSFNEIEAFPPSVGQLTNIRTFAADHNFLQ 425

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  ++  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 426 QLPP-EIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 481

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 482 QLTAMWLSDN 491


>gi|124006408|ref|ZP_01691242.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988065|gb|EAY27736.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 399

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/382 (33%), Positives = 198/382 (51%), Gaps = 26/382 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E +  L++S   +T LP  +++L  L  L + GNK+  LPS I  +  L  L    N L 
Sbjct: 23  EAVHKLNISNQQLTSLPKGIDRLPGLLVLGVSGNKIEVLPSTIDKLQQLEELWFNHNHLH 82

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+S+  L++L  L L HN L +LP  + +L  L+ L+L  N++  +   I  L +L +
Sbjct: 83  TLPESIGKLKKLHELWLNHNHLTKLPESIGELDHLEDLWLDHNQLTVLPESIGKLEHLGI 142

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  N + ELP  + +L+NL +L L  N L  LP+ IG    L  LD Q N L +IP+ 
Sbjct: 143 LNLGHNDLIELPESISKLQNLKSLYLNKNKLAVLPESIGLLQNLQYLDAQSNRLQSIPEE 202

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L +  N L  VPE++ +  HL E ++    L+ LP  + + L ++ ++ L 
Sbjct: 203 IGQLKNLKYLSVDGNHLAVVPESIGELEHLKELHLSHNRLTFLPASI-AQLKTLKDLYLL 261

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            NK T  P G                         F + ++L  +N+  N +T+ P+ + 
Sbjct: 262 YNKLTGLPPG-------------------------FGKLQHLKDINLSHNRITTFPIAIT 296

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L L +NQ++ L  ++ NL  LEVL L++N L KLP SIG L  L  L L  NK
Sbjct: 297 KLTQLKSLALDSNQLTSLPANVGNLEQLEVLSLNDNQLIKLPKSIGKLTNLTTLSLINNK 356

Query: 461 LESLPNEIGFLKELQRLILQSN 482
           L  +P EI  L  L+ L+L+ N
Sbjct: 357 LTDVPIEIQNLPNLEYLVLEGN 378



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 132/397 (33%), Positives = 202/397 (50%), Gaps = 31/397 (7%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           S+ D+L N + +  L++ + +L  LP  + +L  L +L +  N+I+ +   I  L  L  
Sbjct: 14  SMKDALKNPEAVHKLNISNQQLTSLPKGIDRLPGLLVLGVSGNKIEVLPSTIDKLQQLEE 73

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L    N +  LP  +G+LK L  L L HNHL +LP+ IG    L  L L HN+L  +P+ 
Sbjct: 74  LWFNHNHLHTLPESIGKLKKLHELWLNHNHLTKLPESIGELDHLEDLWLDHNQLTVLPES 133

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNIT 338
           +G L +L  L L +N L  +PE++SK  +L    +    L+ LP+  GLL +L       
Sbjct: 134 IGKLEHLGILNLGHNDLIELPESISKLQNLKSLYLNKNKLAVLPESIGLLQNL------- 186

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
                          Q+    S     N++  IP  I  + KNL  +++  N L  +P  
Sbjct: 187 ---------------QYLDAQS-----NRLQSIPEEI-GQLKNLKYLSVDGNHLAVVPES 225

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L EL+L  N+++ L   I  L  L+ L L  N L  LP   G L+ LK ++L  
Sbjct: 226 IGELEHLKELHLSHNRLTFLPASIAQLKTLKDLYLLYNKLTGLPPGFGKLQHLKDINLSH 285

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N++ + P  I  L +L+ L L SNQL SLP  +G+L  L  LS+ +N L  +P+ IG L 
Sbjct: 286 NRITTFPIAITKLTQLKSLALDSNQLTSLPANVGNLEQLEVLSLNDNQLIKLPKSIGKLT 345

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           NL TL L +N  L ++P E+    NL+ + L+  P+S
Sbjct: 346 NLTTLSLINNK-LTDVPIEIQNLPNLEYLVLEGNPIS 381



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/265 (36%), Positives = 141/265 (53%), Gaps = 4/265 (1%)

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
           Y   +S+ + L     +++ N+    L+SLP G+   L  +  + +S NK    PS    
Sbjct: 9   YKGYKSMKDALKNPEAVHKLNISNQQLTSLPKGI-DRLPGLLVLGVSGNKIEVLPST-ID 66

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           +   +  + F HN +  +P  I  + K L ++ +  N LT LP  +G    L +L L  N
Sbjct: 67  KLQQLEELWFNHNHLHTLPESI-GKLKKLHELWLNHNHLTKLPESIGELDHLEDLWLDHN 125

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           Q++ L E I  L +L +L L +N L +LP SI  L+ LK L L +NKL  LP  IG L+ 
Sbjct: 126 QLTVLPESIGKLEHLGILNLGHNDLIELPESISKLQNLKSLYLNKNKLAVLPESIGLLQN 185

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           LQ L  QSN+L S+P  IG L NL YLSV  N+L  +PE IG LE+L  L+L+ N  L  
Sbjct: 186 LQYLDAQSNRLQSIPEEIGQLKNLKYLSVDGNHLAVVPESIGELEHLKELHLSHNR-LTF 244

Query: 534 IPFELALCSNLQIMSLDNCPLSQIP 558
           +P  +A    L+ + L    L+ +P
Sbjct: 245 LPASIAQLKTLKDLYLLYNKLTGLP 269


>gi|355747856|gb|EHH52353.1| hypothetical protein EGM_12782 [Macaca fascicularis]
          Length = 863

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 144/505 (28%), Positives = 244/505 (48%), Gaps = 53/505 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++S + I+H+P  + +L ++ +L+ Y N + + PS +  + NL  L L +N L  +PD+
Sbjct: 219 LNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDT 278

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L +L+ LRVL+L +N+L   P  +  L  L  L L  N I ++  +I+ L NL  L +  
Sbjct: 279 LPSLKYLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLLDH 338

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLE-----------------------ELPKEIGNCT 262
           NK+  L  E+ +L  +  L LA N LE                        +P++I  C 
Sbjct: 339 NKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKICCCA 398

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           ML  L L  N+L  +P  +  L NL +L ++ N +  + +++S   ++      G  ++ 
Sbjct: 399 MLECLTLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSISHLNNICSLEFSGNIIAG 458

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P   + +   I  I L+  K   +P  G     S+Y ++   N I +IP  I S +K L
Sbjct: 459 IPIE-IKNCQKIIKIELNYXKIMYFPL-GLCALDSLYYLSVNGNYISEIPADI-SFSKQL 515

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + + +N L        + + L  L+LG NQI K+   I N+++L VL+L  N  +  P
Sbjct: 516 LHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFP 575

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV----------------- 485
             +  L  L+ LDL EN+L+ + ++I  LK +Q+L   SNQ +                 
Sbjct: 576 RELCTLENLRVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNI 635

Query: 486 ---------SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
                     LP  + ++T L  L +  N ++ IP  IG L NL +L+  +N  ++ IP 
Sbjct: 636 SQIKGRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQ-ISYIPP 694

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEI 561
            L   ++LQ ++L    L+ +PS I
Sbjct: 695 SLLSLNDLQQLNLSGNNLTALPSAI 719



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 225/451 (49%), Gaps = 27/451 (5%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C    +++LDL+ + I+ LP  + +L +LE L L  NKL  L  +I  +  +  L LA+N
Sbjct: 303 CFLPKLISLDLTGNLISSLPKEIRELKNLETLLLDHNKLTFLAVEIFQLLKIKELQLADN 362

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L  +   + N ++LR+L L  N L  +P  +     L+ L L  N++  +  +I  L+N
Sbjct: 363 KLEVISHKIENFRELRILILDKNLLKNIPEKICCCAMLECLTLSDNKLTELPKNIHKLNN 422

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N + ++   +  L N+ +L+ + N +  +P EI NC  ++ ++L + +++  
Sbjct: 423 LRKLHVNRNNMVKITDSISHLNNICSLEFSGNIIAGIPIEIKNCQKIIKIELNYXKIMYF 482

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLS---KCVHLN-------EFNVEGCALSSLP--- 324
           P  L  L +L  L ++ N +  +P  +S   + +HL         F+   C+L +L    
Sbjct: 483 PLGLCALDSLYYLSVNGNYISEIPADISFSKQLLHLELSENKLLIFSEHFCSLINLKYLD 542

Query: 325 ---------DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
                       +S++ S++ + L  NKF  +P    T   ++  ++   NQ+ KI   I
Sbjct: 543 LGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCT-LENLRVLDLSENQLQKISSDI 601

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT---NQISKLSEDIQNLVNLEVLV 432
               K + K+N   N     P++L     L +LN+      ++++L  ++ N+  L+ L 
Sbjct: 602 -CNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELD 660

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           +SNN ++++P +IG LR L  L    N++  +P  +  L +LQ+L L  N L +LP AI 
Sbjct: 661 ISNNAIREIPRNIGELRNLVSLHAYNNQISYIPPSLLSLNDLQQLNLSGNNLTALPSAIY 720

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           +L +L  ++  +N L   P EI   + L+T+
Sbjct: 721 NLFSLKEINFDDNPLLRPPMEICKGKQLYTI 751



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 215/471 (45%), Gaps = 50/471 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L K+ + H+P ++  L +L  L L  N+L   P  + ++  L  L L  N ++SLP  
Sbjct: 265 LSLGKNKLRHIPDTLPSLKYLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKE 324

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L  L L HNKL  L + +++L  +K L L  N+++ +   I+    L +L +  
Sbjct: 325 IRELKNLETLLLDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDK 384

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N ++ +P ++     L  L L+ N L ELPK I     L  L +  N +V I D + +L 
Sbjct: 385 NLLKNIPEKICCCAMLECLTLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSISHLN 444

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           N+  L  S N +  +P  +  C  + +  +    +   P GL  +L S+  ++++ N  +
Sbjct: 445 NICSLEFSGNIIAGIPIEIKNCQKIIKIELNYXKIMYFPLGL-CALDSLYYLSVNGNYIS 503

Query: 346 AYPSG-------------------GPTQFTSVYSINF---EHNQIDKIPYGIFSRAKNLS 383
             P+                        F S+ ++ +     NQI KIP  I S   +L 
Sbjct: 504 EIPADISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASI-SNMISLH 562

Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL------ 437
            + +  N   + P +L T   L  L+L  NQ+ K+S DI NL  ++ L  S+N       
Sbjct: 563 VLILCCNKFETFPRELCTLENLRVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPI 622

Query: 438 --------------------LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
                               L +LP  + N+ +LK LD+  N +  +P  IG L+ L  L
Sbjct: 623 ELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSL 682

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
              +NQ+  +P ++  L +L  L++  NNL ++P  I  L +L  +  +DN
Sbjct: 683 HAYNNQISYIPPSLLSLNDLQQLNLSGNNLTALPSAIYNLFSLKEINFDDN 733


>gi|427791781|gb|JAA61342.1| Putative cytoskeletal regulator flightless-i, partial
           [Rhipicephalus pulchellus]
          Length = 956

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 210/398 (52%), Gaps = 29/398 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +++RVLD  H+ L ++P  V+    +L+ LYL  N+IK +   + +   L  L++ DN I
Sbjct: 11  EEVRVLDYAHHGLEDVPSEVFNYERTLEELYLNANQIKDLPRPLFHCHGLRKLNLSDNDI 70

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LPP L  L +L  LD++ N++ E+P  I  C  L  ++   N +  +P+    L+N+ 
Sbjct: 71  QTLPPALSSLISLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEGFTQLLNIE 130

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
           +L L+   LE +P    +   L    +    L  LP  + + LT ++ + + +N FT  P
Sbjct: 131 QLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSM-ARLTELSRLDIGQNDFTELP 189

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                     +     +L+++    N LTSLP  +G  + LT L
Sbjct: 190 E-------------------------VIGSLPSLTELWCDSNRLTSLPSYMGHLIKLTYL 224

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           +   N+IS ++++I+N+  L  L L+ N L+K+P ++G L+ L  L L++N L +LP+ I
Sbjct: 225 DASRNRISFIADEIENMTMLSDLTLTTNKLQKIPETLGFLQNLTTLRLDDNHLATLPDSI 284

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G L +L+ LI+ SN++ SLP  IG L NL+ L   +N L+ +P EIG+   L  L L DN
Sbjct: 285 GQLSKLEELIINSNEIDSLPSTIGLLRNLTLLMADDNLLEDLPPEIGSCSKLRVLSLRDN 344

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV-VGG 565
             L N+P EL   S+L++++L    L  +P  +  +GG
Sbjct: 345 R-LCNVPDELGHLSSLRVVNLSGNQLRHLPVSLAKLGG 381



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 205/434 (47%), Gaps = 50/434 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR   E +  LD +   +  +P  V      LEELYL  N++  LP  + +   L  L L
Sbjct: 6   LRPAREEVRVLDYAHHGLEDVPSEVFNYERTLEELYLNANQIKDLPRPLFHCHGLRKLNL 65

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           ++N + +LP +L++L  L  LD+  N + E+P  +     L I+    N +  +      
Sbjct: 66  SDNDIQTLPPALSSLISLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEGFTQ 125

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L N+  L + D  +  LP   G L  L  L+L  NHL+ LPK +   T L  LD+  N+ 
Sbjct: 126 LLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELSRLDIGQNDF 185

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+++G+L +LT L    NRL S+P  +   + L   +     +S + D  + ++T +
Sbjct: 186 TELPEVIGSLPSLTELWCDSNRLTSLPSYMGHLIKLTYLDASRNRISFIADE-IENMTML 244

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
           +++TL+ NK                                                L  
Sbjct: 245 SDLTLTTNK------------------------------------------------LQK 256

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           +P  LG    LT L L  N ++ L + I  L  LE L++++N +  LPS+IG LR L  L
Sbjct: 257 IPETLGFLQNLTTLRLDDNHLATLPDSIGQLSKLEELIINSNEIDSLPSTIGLLRNLTLL 316

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             ++N LE LP EIG   +L+ L L+ N+L ++P  +GHL++L  +++  N L+ +P  +
Sbjct: 317 MADDNLLEDLPPEIGSCSKLRVLSLRDNRLCNVPDELGHLSSLRVVNLSGNQLRHLPVSL 376

Query: 515 GTLENLHTLYLNDN 528
             L  LH L+L+ N
Sbjct: 377 AKLGGLHALWLSQN 390



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 176/375 (46%), Gaps = 28/375 (7%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           ++ +    C    +  L+LS + I  LPP++  L  LEEL +  N +  +P  I     L
Sbjct: 49  DLPRPLFHC--HGLRKLNLSDNDIQTLPPALSSLISLEELDISKNNVIEIPDNIKGCKCL 106

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
           + +  + N +  LP+    L  +  L L    L  LP    +L+ LKIL LR N +K + 
Sbjct: 107 SIVEASVNPVGKLPEGFTQLLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLP 166

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
             +  L+ LS L +  N   ELP  +G L +L  L    N L  LP  +G+   L  LD 
Sbjct: 167 KSMARLTELSRLDIGQNDFTELPEVIGSLPSLTELWCDSNRLTSLPSYMGHLIKLTYLDA 226

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
             N +  I D + N+  L+ L L+ N+L+ +PETL    +L    ++   L++LPD +  
Sbjct: 227 SRNRISFIADEIENMTMLSDLTLTTNKLQKIPETLGFLQNLTTLRLDDNHLATLPDSI-- 284

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
                                   Q + +  +    N+ID +P  I    +NL+ +   D
Sbjct: 285 -----------------------GQLSKLEELIINSNEIDSLPSTI-GLLRNLTLLMADD 320

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
           NLL  LP ++G+   L  L+L  N++  + +++ +L +L V+ LS N L+ LP S+  L 
Sbjct: 321 NLLEDLPPEIGSCSKLRVLSLRDNRLCNVPDELGHLSSLRVVNLSGNQLRHLPVSLAKLG 380

Query: 450 KLKCLDLEENKLESL 464
            L  L L +N+ + L
Sbjct: 381 GLHALWLSQNQTKPL 395



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LPP +   + L  L L  N+L ++P ++G++++L  + L+ N L  LP SLA L  L  L
Sbjct: 326 LPPEIGSCSKLRVLSLRDNRLCNVPDELGHLSSLRVVNLSGNQLRHLPVSLAKLGGLHAL 385

Query: 176 DLRHNKLNELPMV---VYKLTSLKIL--YLRFNRIKTVHPD 211
            L  N+   L ++   V + T  ++L  +L        HPD
Sbjct: 386 WLSQNQTKPLVLLQSDVDRETGQRVLTCFLLPQESSAAHPD 426


>gi|418712114|ref|ZP_13272859.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791381|gb|EKR85057.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 379

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/312 (37%), Positives = 181/312 (58%), Gaps = 3/312 (0%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L++   K+  LP E+ +L+NL +LDLA+N  + LPKEIG    L  L+L +N+L N
Sbjct: 49  DVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKN 108

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L NL  L LS NRL + P+ + +  +L + N++   L++L   +   L ++  
Sbjct: 109 LPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEI-GQLKNLQK 167

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L  N+ T        Q  ++  +N + N++  +P  I  + +NL ++ + +N LT LP
Sbjct: 168 LNLDYNQLTTLLQE-IGQLKNLQKLNLDKNRLKALPNEI-GQLQNLQELYLSNNQLTILP 225

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  L LG NQ++ L ++I  L NL++L   NN L  LP  IG L+KL+ L L
Sbjct: 226 EEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYL 285

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+L +LP EIG L+ LQ L L  NQL +LP+ IG L NL       N L  +P+EIG 
Sbjct: 286 SHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQ 345

Query: 517 LENLHTLYLNDN 528
           L+NL  L LN+N
Sbjct: 346 LQNLQWLKLNNN 357



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 195/373 (52%), Gaps = 30/373 (8%)

Query: 145 YVTNLTCLGLAE----NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           ++  L+C   AE     +   L  +L N   +RVL+L   KL  LP  + +L +LK L L
Sbjct: 19  FLIYLSCEIQAEKIKPGTYRDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDL 78

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
             N+ KT+  +I  L NL  L++ +N+++ LP E+G+L+NL TL L+ N L   P+EIG 
Sbjct: 79  ANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQ 138

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  L+L +N+L  +   +G L NL +L L YN+L ++ + + +  +L + N++   L
Sbjct: 139 LKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRL 198

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            +LP+ +   L ++  + LS N+ T  P                             + K
Sbjct: 199 KALPNEI-GQLQNLQELYLSNNQLTILPEE-------------------------IGQLK 232

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           NL  + + DN LT LP ++G    L  L    N+++ L ++I  L  L+ L LS+N L  
Sbjct: 233 NLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTT 292

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           LP  IG L  L+ L L +N+L +LP EIG LK LQ  I  +NQL  LP+ IG L NL +L
Sbjct: 293 LPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWL 352

Query: 501 SVGENNLQSIPEE 513
            +  N L S  EE
Sbjct: 353 KLNNNQLSSQEEE 365



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/313 (36%), Positives = 174/313 (55%), Gaps = 4/313 (1%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            L+L+   L  LPKEI     L +LDL +N+   +P  +G L NL  L L  N+L+++P+
Sbjct: 52  VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + +  +L    +    L++ P   +  L ++  + L  N+ T        Q  ++  +N
Sbjct: 112 EIGQLQNLQTLILSVNRLTTFPQE-IGQLKNLQKLNLDYNQLTTLLQ-EIGQLKNLQKLN 169

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            ++NQ+  +   I  + KNL K+N+  N L +LP ++G    L EL L  NQ++ L E+I
Sbjct: 170 LDYNQLTTLLQEI-GQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEI 228

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NL+ L+L +N L  LP  IG L+ LK L    N+L  LP EIG L++LQ L L  N
Sbjct: 229 GQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHN 288

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL +LP+ IG L NL  L + +N L ++P+EIG L+NL T +++ N  L  +P E+    
Sbjct: 289 QLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQT-FISFNNQLTMLPQEIGQLQ 347

Query: 543 NLQIMSLDNCPLS 555
           NLQ + L+N  LS
Sbjct: 348 NLQWLKLNNNQLS 360



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/309 (36%), Positives = 171/309 (55%), Gaps = 4/309 (1%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  L+L   +L  +P  +  L NL  L L+ N+ +++P+ + +  +L E
Sbjct: 39  DLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQE 98

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            N+    L +LP  +   L ++  + LS N+ T +P     Q  ++  +N ++NQ+  + 
Sbjct: 99  LNLWNNQLKNLPKEI-GQLQNLQTLILSVNRLTTFPQE-IGQLKNLQKLNLDYNQLTTLL 156

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + KNL K+N+  N LT+L  ++G    L +LNL  N++  L  +I  L NL+ L 
Sbjct: 157 QEI-GQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELY 215

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           LSNN L  LP  IG L+ L+ L L +N+L  LP EIG L+ L+ L   +N+L  LP+ IG
Sbjct: 216 LSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIG 275

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L  L YL +  N L ++P+EIG LENL  LYLNDN  L  +P E+    NLQ     N 
Sbjct: 276 QLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQ-LTTLPKEIGQLKNLQTFISFNN 334

Query: 553 PLSQIPSEI 561
            L+ +P EI
Sbjct: 335 QLTMLPQEI 343



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 117/358 (32%), Positives = 176/358 (49%), Gaps = 49/358 (13%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  +++L +L+ L L  N+  +LP +IG + NL  L L  N L +LP  
Sbjct: 53  LNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ L L  N+L   P  + +L +L+ L L +N++ T+  +I  L NL  L++  
Sbjct: 113 IGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDY 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  L  E+G+LKNL  L+L  N L+ LP EIG    L  L L +N+L  +P+ +G L 
Sbjct: 173 NQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLK 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L  +P+ + +  +                  L  L S+N      N+ T
Sbjct: 233 NLQALILGDNQLTILPKEIGQLQN------------------LKLLYSVN------NELT 268

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P               E  Q+ K+ Y   S            N LT+LP ++G    L
Sbjct: 269 ILPQ--------------EIGQLQKLQYLYLSH-----------NQLTTLPKEIGQLENL 303

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            EL L  NQ++ L ++I  L NL+  +  NN L  LP  IG L+ L+ L L  N+L S
Sbjct: 304 QELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLSS 361



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 167/327 (51%), Gaps = 27/327 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +LDL+ +    LP  + +L +L+EL L+ N+L +LP +IG + NL  L L+ N LT
Sbjct: 71  QNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLT 130

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           + P  +  L+ L+ L+L +N+L  L   + +L +L+ L L +N++ T+  +I  L NL  
Sbjct: 131 TFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQK 190

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  N+++ LP E+G+L+NL  L L++N L  LP+EIG    L  L L  N+L  +P  
Sbjct: 191 LNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKE 250

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L    N L  +P+ + +   L    +    L++LP   +  L ++  + L+
Sbjct: 251 IGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKE-IGQLENLQELYLN 309

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + KNL      +N LT LP ++G
Sbjct: 310 DNQLTTLPKE-------------------------IGQLKNLQTFISFNNQLTMLPQEIG 344

Query: 401 TWVGLTELNLGTNQISKLSED-IQNLV 426
               L  L L  NQ+S   E+ IQ L+
Sbjct: 345 QLQNLQWLKLNNNQLSSQEEERIQKLL 371



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 120/212 (56%), Gaps = 5/212 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + +T L   + +L +L++L L  N+L +LP++IG + NL  L L+ N LT
Sbjct: 163 KNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLT 222

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP+ +  L+ L+ L L  N+L  LP  + +L +LK+LY   N +  +  +I  L  L  
Sbjct: 223 ILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQY 282

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+L+NL  L L  N L  LPKEIG    L T    +N+L  +P  
Sbjct: 283 LYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQE 342

Query: 281 LGNLINLTRLRLSYNRL-----ESVPETLSKC 307
           +G L NL  L+L+ N+L     E + + L KC
Sbjct: 343 IGQLQNLQWLKLNNNQLSSQEEERIQKLLPKC 374



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N   ++ L+L   KL +LP EI  L+ L+ L L +NQ  +LP+ IG L NL 
Sbjct: 38  RDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQ 97

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L++  N L+++P+EIG L+NL TL L+ N  L   P E+    NLQ ++LD   L+ + 
Sbjct: 98  ELNLWNNQLKNLPKEIGQLQNLQTLILSVNR-LTTFPQEIGQLKNLQKLNLDYNQLTTLL 156

Query: 559 SEI 561
            EI
Sbjct: 157 QEI 159


>gi|424840764|ref|ZP_18265389.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395318962|gb|EJF51883.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 485

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 144/460 (31%), Positives = 228/460 (49%), Gaps = 34/460 (7%)

Query: 75  PKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLS-------KSSITHLPPSVEKLTHLE 127
           P P  + K   +  L +E      K EN+ +LD+S       +  +  LP  + + + L 
Sbjct: 25  PGPAGQAKAVKEQYLVLEDGRQFLKAENLADLDISCQALILEEEELAELPAKIGQYSELR 84

Query: 128 ELYLYGNK-LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELP 186
            L L+G + L  LP +IG + NL  L L    +  LP S+  LQ L++LDL + +L ELP
Sbjct: 85  YLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLQILDLGNCQLQELP 144

Query: 187 MVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDL 246
                                   ++  L NL  L++  N++ ELPP +G+L+ L   DL
Sbjct: 145 -----------------------EELGQLQNLEALNLSANQLEELPPSIGQLQALKMADL 181

Query: 247 AHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK 306
           + N L+ELP E    T L  L L +N L  +P   G L  L  L+LS N+L+ +P +L +
Sbjct: 182 SSNRLQELPNEFSQLTQLEELALANNLLSFLPSNFGQLQALKTLQLSENQLDQLPASLGQ 241

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
              L    ++   L  +P   +  L S+  + LS N     P     Q  ++ S+    N
Sbjct: 242 LKQLELLELQDNDLGQIP-AQIGQLQSLVELDLSDNFIQQLPPE-IGQLQALKSLFITEN 299

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
           ++ ++P   F++ KNL ++ +++N L +LP++ G    L EL L  N++  L + I+ L 
Sbjct: 300 ELSQLPPE-FAQLKNLQELQLQENKLIALPINFGKLSQLEELQLSENKLEALPKSIKRLK 358

Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
            L  L L NN +   P +  N++ L  LDLE N +E LP EI  L+ L+ LIL  N+L +
Sbjct: 359 KLSSLNLGNNEIYLFPKNACNIKNLLALDLEGNYIEELPEEISQLQNLEFLILYDNELRN 418

Query: 487 LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
           LP  +  LT L  L + +N  ++ PE +  +  L+ L LN
Sbjct: 419 LPPYLQDLTALRRLEISDNEFETFPEVLYQMRQLNDLILN 458



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 195/376 (51%), Gaps = 3/376 (0%)

Query: 109 SKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLAN 168
            + ++  LP  + +L +LE L L    +  LP+ IG + NL  L L    L  LP+ L  
Sbjct: 90  GQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLQILDLGNCQLQELPEELGQ 149

Query: 169 LQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           LQ L  L+L  N+L ELP  + +L +LK+  L  NR++ +  +   L+ L  L++ +N +
Sbjct: 150 LQNLEALNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALANNLL 209

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LP   G+L+ L TL L+ N L++LP  +G    L  L+LQ N+L  IP  +G L +L 
Sbjct: 210 SFLPSNFGQLQALKTLQLSENQLDQLPASLGQLKQLELLELQDNDLGQIPAQIGQLQSLV 269

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L LS N ++ +P  + +   L    +    LS LP    + L ++  + L  NK  A P
Sbjct: 270 ELDLSDNFIQQLPPEIGQLQALKSLFITENELSQLPPE-FAQLKNLQELQLQENKLIALP 328

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                + + +  +    N+++ +P  I  R K LS +N+ +N +   P +      L  L
Sbjct: 329 INF-GKLSQLEELQLSENKLEALPKSI-KRLKKLSSLNLGNNEIYLFPKNACNIKNLLAL 386

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           +L  N I +L E+I  L NLE L+L +N L+ LP  + +L  L+ L++ +N+ E+ P  +
Sbjct: 387 DLEGNYIEELPEEISQLQNLEFLILYDNELRNLPPYLQDLTALRRLEISDNEFETFPEVL 446

Query: 469 GFLKELQRLILQSNQL 484
             +++L  LIL  +Q 
Sbjct: 447 YQMRQLNDLILNVDQF 462



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 180/352 (51%), Gaps = 4/352 (1%)

Query: 186 PMVVYKLTSLKILYLRFNR-IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTL 244
           P  + + + L+ L L     ++ +  +I  L NL +L +    I+ LP  +G+L+NL  L
Sbjct: 74  PAKIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLQIL 133

Query: 245 DLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETL 304
           DL +  L+ELP+E+G    L  L+L  N+L  +P  +G L  L    LS NRL+ +P   
Sbjct: 134 DLGNCQLQELPEELGQLQNLEALNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNEF 193

Query: 305 SKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFE 364
           S+   L E  +    LS LP      L ++  + LS N+    P+              +
Sbjct: 194 SQLTQLEELALANNLLSFLPSNF-GQLQALKTLQLSENQLDQLPASLGQLKQLELLELQD 252

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN 424
            N + +IP  I  + ++L ++++ DN +  LP ++G    L  L +  N++S+L  +   
Sbjct: 253 -NDLGQIPAQI-GQLQSLVELDLSDNFIQQLPPEIGQLQALKSLFITENELSQLPPEFAQ 310

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           L NL+ L L  N L  LP + G L +L+ L L ENKLE+LP  I  LK+L  L L +N++
Sbjct: 311 LKNLQELQLQENKLIALPINFGKLSQLEELQLSENKLEALPKSIKRLKKLSSLNLGNNEI 370

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
              P+   ++ NL  L +  N ++ +PEEI  L+NL  L L DN   N  P+
Sbjct: 371 YLFPKNACNIKNLLALDLEGNYIEELPEEISQLQNLEFLILYDNELRNLPPY 422



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 177/350 (50%), Gaps = 29/350 (8%)

Query: 213 QYLSNLSMLSMRDNK-IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
           QY S L  LS+   + + ELP E+G+L+NL  L L    ++ LP  IG    L  LDL +
Sbjct: 79  QY-SELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLQILDLGN 137

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
            +L  +P+ LG L NL  L LS N+LE +P ++ +   L   ++    L  LP+   S L
Sbjct: 138 CQLQELPEELGQLQNLEALNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNEF-SQL 196

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
           T +  + L+ N  +  PS    Q  ++ ++    NQ+D++P  +  + K L  + ++DN 
Sbjct: 197 TQLEELALANNLLSFLPSNF-GQLQALKTLQLSENQLDQLPASL-GQLKQLELLELQDND 254

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           L  +P  +G    L EL+L                       S+N +++LP  IG L+ L
Sbjct: 255 LGQIPAQIGQLQSLVELDL-----------------------SDNFIQQLPPEIGQLQAL 291

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           K L + EN+L  LP E   LK LQ L LQ N+L++LP   G L+ L  L + EN L+++P
Sbjct: 292 KSLFITENELSQLPPEFAQLKNLQELQLQENKLIALPINFGKLSQLEELQLSENKLEALP 351

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           + I  L+ L +L L +N  +   P       NL  + L+   + ++P EI
Sbjct: 352 KSIKRLKKLSSLNLGNNE-IYLFPKNACNIKNLLALDLEGNYIEELPEEI 400



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 142/305 (46%), Gaps = 51/305 (16%)

Query: 255 PKEIGNCTMLVTLDLQHNE-LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           P +IG  + L  L L   E L  +P+ +G L NL  L L+   ++ +P ++ +  +L   
Sbjct: 74  PAKIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLQIL 133

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           ++  C L  LP+ L                                              
Sbjct: 134 DLGNCQLQELPEEL---------------------------------------------- 147

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
               + +NL  +N+  N L  LP  +G    L   +L +N++ +L  +   L  LE L L
Sbjct: 148 ---GQLQNLEALNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELAL 204

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           +NNLL  LPS+ G L+ LK L L EN+L+ LP  +G LK+L+ L LQ N L  +P  IG 
Sbjct: 205 ANNLLSFLPSNFGQLQALKTLQLSENQLDQLPASLGQLKQLELLELQDNDLGQIPAQIGQ 264

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L +L  L + +N +Q +P EIG L+ L +L++ +N  L+ +P E A   NLQ + L    
Sbjct: 265 LQSLVELDLSDNFIQQLPPEIGQLQALKSLFITENE-LSQLPPEFAQLKNLQELQLQENK 323

Query: 554 LSQIP 558
           L  +P
Sbjct: 324 LIALP 328


>gi|421129189|ref|ZP_15589392.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359579|gb|EKP06671.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 400

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/357 (34%), Positives = 190/357 (53%), Gaps = 26/357 (7%)

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           + T L  +L N   +RVLDL   KL  LP  + +L +L++L L  N++ T+  +I  L N
Sbjct: 34  AYTDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQN 93

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N++   P E+G+LKNL TL L+ N L  LPKEIG    L  L L  N+L  +
Sbjct: 94  LQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTL 153

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  +G L NL +L L  N+L+++P+ + +  +L E ++    L +L              
Sbjct: 154 PKEIGQLKNLQQLNLYANQLKTLPKEIGQLQNLRELHLSYNQLKTL-------------- 199

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
                      S    Q  ++  ++   NQ+  +P  I  + KNL  +++ +N   ++P 
Sbjct: 200 -----------SAEIGQLQNLQVLDLNDNQLKTLPKEI-GQLKNLQMLDLNNNQFKTVPE 247

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++G    L  L+LG NQ   + E+I  L NL++L L+NN  K +P   G L+ L+ L L 
Sbjct: 248 EIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLN 307

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            N+L +LPNEI  LK L+ L L  NQL +L   IG L NL  LS+ +N L ++P+EI
Sbjct: 308 ANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/345 (33%), Positives = 184/345 (53%), Gaps = 27/345 (7%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L + + K++ LP E+G+L+NL  L+L +N L  LPKEIG    L  L L  N+L  
Sbjct: 47  DVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTT 106

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
            P  +G L NL  L LS NRL ++P+ + +  +L E  +    L +LP  +         
Sbjct: 107 FPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPKEI--------- 157

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
                            Q  ++  +N   NQ+  +P  I  + +NL ++++  N L +L 
Sbjct: 158 ----------------GQLKNLQQLNLYANQLKTLPKEI-GQLQNLRELHLSYNQLKTLS 200

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  L+L  NQ+  L ++I  L NL++L L+NN  K +P  IG L+ L+ LDL
Sbjct: 201 AEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDL 260

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+ +++P EIG LK LQ L L +NQ  ++P   G L NL  LS+  N L ++P EI  
Sbjct: 261 GYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQ 320

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+NL  L+L+ N  L  +  E+    NL+ +SL +  L+ +P EI
Sbjct: 321 LKNLRELHLSYNQ-LKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 174/296 (58%), Gaps = 3/296 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L+ + +  LP  + +L +L+EL+L GN+L + P +IG + NL  L L++N LT
Sbjct: 69  QNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLT 128

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ LR L L  N+L  LP  + +L +L+ L L  N++KT+  +I  L NL  
Sbjct: 129 TLPKEIGQLKNLRELYLNTNQLKTLPKEIGQLKNLQQLNLYANQLKTLPKEIGQLQNLRE 188

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ L  E+G+L+NL  LDL  N L+ LPKEIG    L  LDL +N+   +P+ 
Sbjct: 189 LHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEE 248

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L YN+ ++VPE + +  +L    +      ++P+     L ++  ++L+
Sbjct: 249 IGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEE-TGQLKNLQMLSLN 307

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
            N+ T  P+    Q  ++  ++  +NQ+  +   I  + KNL K++++DN LT+LP
Sbjct: 308 ANQLTTLPN-EIRQLKNLRELHLSYNQLKTLSAEI-GQLKNLKKLSLRDNQLTTLP 361



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/340 (33%), Positives = 183/340 (53%), Gaps = 26/340 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + +L +L+ L L  N+LA+LP +IG + NL  L L+ N LT+ P  
Sbjct: 51  LDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L  N+L  LP  + +L +L+ LYL  N++KT+  +I  L NL  L++  
Sbjct: 111 IGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPKEIGQLKNLQQLNLYA 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+++ LP E+G+L+NL  L L++N L+ L  EIG    L  LDL  N+L  +P  +G L 
Sbjct: 171 NQLKTLPKEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLK 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L+ N+ ++VPE + +  +L   ++      ++P+  +  L ++  + L+ N+F 
Sbjct: 231 NLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEE-IGQLKNLQMLFLNNNQFK 289

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P               E  Q+           KNL  +++  N LT+LP ++     L
Sbjct: 290 TVPE--------------ETGQL-----------KNLQMLSLNANQLTTLPNEIRQLKNL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
            EL+L  NQ+  LS +I  L NL+ L L +N L  LP  I
Sbjct: 325 RELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 114/344 (33%), Positives = 182/344 (52%), Gaps = 26/344 (7%)

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
           ++  L L+E  L +LP  +  LQ L+VL+L +N+L  LP  + +L +L+ L+L  N++ T
Sbjct: 47  DVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTT 106

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
              +I  L NL  L +  N++  LP E+G+LKNL  L L  N L+ LPKEIG    L  L
Sbjct: 107 FPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPKEIGQLKNLQQL 166

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
           +L  N+L  +P  +G L NL  L LSYN+L+++   + +  +L   ++    L +LP  +
Sbjct: 167 NLYANQLKTLPKEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEI 226

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
                                     Q  ++  ++  +NQ   +P  I  + KNL  +++
Sbjct: 227 -------------------------GQLKNLQMLDLNNNQFKTVPEEI-GQLKNLQVLDL 260

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
             N   ++P ++G    L  L L  NQ   + E+   L NL++L L+ N L  LP+ I  
Sbjct: 261 GYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQ 320

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
           L+ L+ L L  N+L++L  EIG LK L++L L+ NQL +LP+ I
Sbjct: 321 LKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364


>gi|47222121|emb|CAG11547.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1279

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 140/465 (30%), Positives = 216/465 (46%), Gaps = 49/465 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  +      LEELYL  N++  LP Q+     L  L +
Sbjct: 51  FRGEEEVISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSM 110

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L++LP ++A+L  L+ LD+  N + E P  +     L ++    N I  +      
Sbjct: 111 PDNDLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQ 170

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ +PK I   T L  LDL  NE 
Sbjct: 171 LLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEF 230

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
            ++P++L  + +L  L L  N L+S+P                        G+ +  T  
Sbjct: 231 SDVPEVLEQIHSLKELWLDNNSLQSIP------------------------GVRTGGTKT 266

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++T   ++   Y    P QF                      + + L  +++  N + +
Sbjct: 267 LSMTPCYSRVIPYVP--PQQF--------------------LGKLRQLRYLDLAKNRIET 304

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           L  D+     L +L L +N +  L + I  L  L  L + +N L  LP++IG+L  ++ L
Sbjct: 305 LDTDISGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPNTIGSLSLMEEL 364

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           D   N+LESLP  IG+L  L+      N L  LPR IG+  N++ +S+  N L+ +PEEI
Sbjct: 365 DCSCNELESLPPTIGYLHSLRTFAADENFLTELPREIGNCKNVTVMSLRSNKLEFLPEEI 424

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL-DNCPLSQIP 558
           G +  L  L L+DN  L N+PF      +L  + L DN   + IP
Sbjct: 425 GQMTKLRVLNLSDNR-LKNLPFTFTKLKDLAALWLSDNQSKALIP 468


>gi|403257262|ref|XP_003921246.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Saimiri boliviensis boliviensis]
          Length = 860

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 143/505 (28%), Positives = 247/505 (48%), Gaps = 53/505 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++S + I+H+P  + +L ++ +L+L  N + + PS +  + NL  L L +N L  LPD+
Sbjct: 216 LNVSHNHISHIPKEMLQLGNIRQLFLNNNYIENFPSDLECLGNLEILSLGKNKLRHLPDT 275

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L +L+ LR+L+L +N+L   P  +  L  L  L L  N I ++  +I+ L +L  L +  
Sbjct: 276 LPSLKNLRILNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRELKHLETLLLDH 335

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLE-----------------------ELPKEIGNCT 262
           NK+  L  E+ +L  +  L LA N LE                        +P++I  C 
Sbjct: 336 NKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNILKNIPEKISYCA 395

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           ML  L L  N+L  +P  +  L NL +L ++ N +  + + +S   ++      G  ++S
Sbjct: 396 MLECLSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVKINDNISHLNNICSIEFSGNIITS 455

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P   + +   I  + L+ NK   +P  G     S+Y ++   N I +IP  I S +K L
Sbjct: 456 VPIE-IKNCQKITKVELNYNKIMYFPV-GLCALDSLYYLSVNGNYISEIPVDI-SFSKQL 512

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + + +N L        + + L  L+LG NQI K+   I N+++L VL+L  N  +  P
Sbjct: 513 LHLELNENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFP 572

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS---------------- 486
             +  L  L+ LDL EN+L+ + ++I  LK +Q+L   SNQ +                 
Sbjct: 573 RELCTLENLRVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNI 632

Query: 487 ----------LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
                     LP  + ++T L  L +  N ++ IP  IG L NL +L+ ++N  ++ +P 
Sbjct: 633 SQIKGRKLTILPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAHNNQ-ISYLPP 691

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEI 561
            L   ++LQ ++L    L+ +PS+I
Sbjct: 692 SLLSLNDLQQLNLSGNNLTALPSDI 716



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 240/496 (48%), Gaps = 31/496 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L K+ + HLP ++  L +L  L L  N+L   P  + ++  L  L L  N ++SLP  
Sbjct: 262 LSLGKNKLRHLPDTLPSLKNLRILNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKE 321

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKL-----------------------TSLKILYLRF 202
           +  L+ L  L L HNKL  L + +++L                         L+IL L  
Sbjct: 322 IRELKHLETLLLDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDK 381

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N +K +   I Y + L  LS+ DNK+ ELP  + +LKNL  L +  N++ ++   I +  
Sbjct: 382 NILKNIPEKISYCAMLECLSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVKINDNISHLN 441

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            + +++   N + ++P  + N   +T++ L+YN++   P  L     L   +V G  +S 
Sbjct: 442 NICSIEFSGNIITSVPIEIKNCQKITKVELNYNKIMYFPVGLCALDSLYYLSVNGNYISE 501

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P   +S    + ++ L+ NK   + S       ++  ++   NQI KIP  I S   +L
Sbjct: 502 IPVD-ISFSKQLLHLELNENKLLIF-SEHFCSLINLKYLDLGKNQIKKIPASI-SNMISL 558

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + +  N   + P +L T   L  L+L  NQ+ K+S DI NL  ++ L  S+N     P
Sbjct: 559 HVLILCCNKFETFPRELCTLENLRVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFP 618

Query: 443 SSIGNLRKLKCLDLEE---NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
             +  L+ L+ L++ +    KL  LP E+  + +L+ L + +N +  +PR IG L NL  
Sbjct: 619 IELCQLQSLEQLNISQIKGRKLTILPGELSNMTQLKELDISNNAIREIPRNIGELRNLVS 678

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPS 559
           L    N +  +P  + +L +L  L L+ N  L  +P ++    +L+ ++ D+ PL + P 
Sbjct: 679 LHAHNNQISYLPPSLLSLNDLQQLNLSGNN-LTALPSDIYNLFSLKEINFDDNPLLRPPM 737

Query: 560 EIVVGGP-SLIIRYLK 574
           EI  G     I RYL+
Sbjct: 738 EICKGKQLYTIARYLQ 753


>gi|161086957|ref|NP_766467.2| leucine-rich repeat and death domain-containing protein 1 [Mus
           musculus]
 gi|341940918|sp|Q8C0R9.2|LRRD1_MOUSE RecName: Full=Leucine-rich repeat and death domain-containing
           protein 1
 gi|187954881|gb|AAI41027.1| RIKEN cDNA 4932412H11 gene [Mus musculus]
 gi|219520514|gb|AAI45171.1| RIKEN cDNA 4932412H11 gene [Mus musculus]
          Length = 853

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 148/522 (28%), Positives = 249/522 (47%), Gaps = 53/522 (10%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           I KE L+   EN+  L L+ + I  LP  +E L +LE L L  N L  +P  +  + NL 
Sbjct: 220 IPKELLQL--ENMRQLLLNSNHIDTLPSGLEHLRYLETLSLGKNMLTYIPDSLSSLKNLR 277

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L  N LT    SL  L +L  L+L  N +  LP  V +L +L+ L +  N++  +  
Sbjct: 278 ILNLEYNQLTIFSKSLCFLPKLNSLNLTGNMIGSLPKEVRELKNLESLLMDHNKLTFLAV 337

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           +I  L  +  L + DNK+  + P++   K L  L+L  N L+ +PK+I +C  L +L L 
Sbjct: 338 EIFQLPKIKELHLADNKLEAISPKIENFKELRLLNLDKNLLQSIPKKISHCVNLESLSLS 397

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
            N +  +P  +  L NL +L ++ N++ ++ E +S   +++     G  ++ +P   + +
Sbjct: 398 DNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEISHLSNIHILEFSGNQITHVPIE-IKN 456

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
              I  + L+ N    +P  G     S+  ++F  N I +IP  + S +K L  + +  N
Sbjct: 457 CRKITRVELNYNNIMYFPV-GLCALQSLDYLSFNGNYISEIPVDM-SFSKQLLHLELNRN 514

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            LT     L +   L  L+L  NQI  +   I  +V+L VL+LS+N  +  P  + +L+ 
Sbjct: 515 KLTVFSKHLCSLTNLEYLDLAKNQIMTIPSCISAMVSLHVLILSDNKFESFPKELCSLKN 574

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSN--------------------------QL 484
           L+ LD+ ENKL+ +P EI  LK +Q+L L +N                          +L
Sbjct: 575 LRVLDISENKLQKIPLEISKLKRIQKLNLSNNIFTNFPVELCQLQTLEELNISQTSGKKL 634

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC-------------- 530
             LP  + H+T L  L++  N ++ IP+ IG L +L + Y ++N                
Sbjct: 635 TRLPEEVSHMTQLKILNISNNAIKDIPKNIGELRSLVSFYASNNQISSLPSSFLSLEVLQ 694

Query: 531 --------LNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVG 564
                   +  +P  +   S+L+ ++ D+ PL + P EI  G
Sbjct: 695 SLDLRGNNMTALPSGIYKLSSLKEINFDDNPLMRPPMEICKG 736



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 229/459 (49%), Gaps = 7/459 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L ++ ++ +P  ++   +L+ L    N+++ +P ++  + N+  L L  N + +LP  
Sbjct: 187 LSLQENGLSSIPLEIQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTLPSG 246

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L +L+ L  L L  N L  +P  +  L +L+IL L +N++      + +L  L+ L++  
Sbjct: 247 LEHLRYLETLSLGKNMLTYIPDSLSSLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNLTG 306

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N I  LP E+ ELKNL +L + HN L  L  EI     +  L L  N+L  I   + N  
Sbjct: 307 NMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAISPKIENFK 366

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L  N L+S+P+ +S CV+L   ++    +  LP   +  L ++  + ++RNK  
Sbjct: 367 ELRLLNLDKNLLQSIPKKISHCVNLESLSLSDNNIEELPKK-IRKLKNLRQLHVNRNKMI 425

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
              +   +  ++++ + F  NQI  +P  I    + +++V +  N +   P+ L     L
Sbjct: 426 TM-TEEISHLSNIHILEFSGNQITHVPIEI-KNCRKITRVELNYNNIMYFPVGLCALQSL 483

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L+   N IS++  D+     L  L L+ N L      + +L  L+ LDL +N++ ++P
Sbjct: 484 DYLSFNGNYISEIPVDMSFSKQLLHLELNRNKLTVFSKHLCSLTNLEYLDLAKNQIMTIP 543

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
           + I  +  L  LIL  N+  S P+ +  L NL  L + EN LQ IP EI  L+ +  L L
Sbjct: 544 SCISAMVSLHVLILSDNKFESFPKELCSLKNLRVLDISENKLQKIPLEISKLKRIQKLNL 603

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCP---LSQIPSEI 561
           ++N    N P EL     L+ +++       L+++P E+
Sbjct: 604 SNN-IFTNFPVELCQLQTLEELNISQTSGKKLTRLPEEV 641



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 231/447 (51%), Gaps = 29/447 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+L+ + I  LP  V +L +LE L +  NKL  L  +I  +  +  L LA+N L ++   
Sbjct: 302 LNLTGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAISPK 361

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + N ++LR+L+L  N L  +P  +    +L+ L L  N I+ +   I+ L NL  L +  
Sbjct: 362 IENFKELRLLNLDKNLLQSIPKKISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNR 421

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+  +  E+  L N+  L+ + N +  +P EI NC  +  ++L +N ++  P  L  L 
Sbjct: 422 NKMITMTEEISHLSNIHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQ 481

Query: 286 NLTRLRLSYNRLESVPETLS---KCVHL-------NEFNVEGCALSSLP----------- 324
           +L  L  + N +  +P  +S   + +HL         F+   C+L++L            
Sbjct: 482 SLDYLSFNGNYISEIPVDMSFSKQLLHLELNRNKLTVFSKHLCSLTNLEYLDLAKNQIMT 541

Query: 325 -DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
               +S++ S++ + LS NKF ++P        ++  ++   N++ KIP  I S+ K + 
Sbjct: 542 IPSCISAMVSLHVLILSDNKFESFPKE-LCSLKNLRVLDISENKLQKIPLEI-SKLKRIQ 599

Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTN---QISKLSEDIQNLVNLEVLVLSNNLLKK 440
           K+N+ +N+ T+ P++L     L ELN+      ++++L E++ ++  L++L +SNN +K 
Sbjct: 600 KLNLSNNIFTNFPVELCQLQTLEELNISQTSGKKLTRLPEEVSHMTQLKILNISNNAIKD 659

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           +P +IG LR L       N++ SLP+    L+ LQ L L+ N + +LP  I  L++L  +
Sbjct: 660 IPKNIGELRSLVSFYASNNQISSLPSSFLSLEVLQSLDLRGNNMTALPSGIYKLSSLKEI 719

Query: 501 SVGENNLQSIPEEIGTLENLH--TLYL 525
           +  +N L   P EI   + +H  T YL
Sbjct: 720 NFDDNPLMRPPMEICKGKEMHMITCYL 746



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 201/457 (43%), Gaps = 72/457 (15%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP----------------------- 210
            ++L    L E P+ + K+  +K LYL  N+IK                           
Sbjct: 139 TVNLDAKGLQEFPVDIVKVKYVKYLYLDKNQIKNFQGIDPGDLLGLEILSLQENGLSSIP 198

Query: 211 -DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
            +IQ   NL +L+   N+I ++P EL +L+N+  L L  NH++ LP  + +   L TL L
Sbjct: 199 LEIQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTLPSGLEHLRYLETLSL 258

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL-- 327
             N L  IPD L +L NL  L L YN+L    ++L     LN  N+ G  + SLP  +  
Sbjct: 259 GKNMLTYIPDSLSSLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNLTGNMIGSLPKEVRE 318

Query: 328 --------------------LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQ 367
                               +  L  I  + L+ NK  A  S     F  +  +N + N 
Sbjct: 319 LKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAI-SPKIENFKELRLLNLDKNL 377

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
           +  IP  I S   NL  +++ DN +  LP  +     L +L++  N++  ++E+I +L N
Sbjct: 378 LQSIPKKI-SHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEISHLSN 436

Query: 428 LEVLVLSNNLLKKLPSSIGNLRK-----------------------LKCLDLEENKLESL 464
           + +L  S N +  +P  I N RK                       L  L    N +  +
Sbjct: 437 IHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEI 496

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P ++ F K+L  L L  N+L    + +  LTNL YL + +N + +IP  I  + +LH L 
Sbjct: 497 PVDMSFSKQLLHLELNRNKLTVFSKHLCSLTNLEYLDLAKNQIMTIPSCISAMVSLHVLI 556

Query: 525 LNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+DN    + P EL    NL+++ +    L +IP EI
Sbjct: 557 LSDNK-FESFPKELCSLKNLRVLDISENKLQKIPLEI 592


>gi|418687360|ref|ZP_13248519.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410737684|gb|EKQ82423.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 402

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 197/368 (53%), Gaps = 26/368 (7%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +L ++L N +  R+L+L  +KL  L   + KL +L+ LYL +N++ T+  +I  L NL +
Sbjct: 39  NLTEALQNPKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQV 98

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+L+NL  L+L  N L  LP E+G    L  L+L  N+L  +P+ 
Sbjct: 99  LDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEK 158

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L  +PE + +  +L   N +G  L++ P  +   L  +  + L 
Sbjct: 159 IGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEI-GQLQKLQELNLG 217

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T                                + +NL  +++  N LT+LP ++G
Sbjct: 218 FNRLTTLREE-------------------------VVQLQNLQILDLISNPLTTLPKEIG 252

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L +L L  NQ++ L E+I  L  L+ L L NN L+ LP  I  L+KL+ L LE N+
Sbjct: 253 QLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQ 312

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           + + P EIG L+ LQ L L  NQL +LP+ IG L NL  L++  N L ++P+E+G L+ L
Sbjct: 313 ITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKL 372

Query: 521 HTLYLNDN 528
             L L +N
Sbjct: 373 RKLNLYNN 380



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/342 (35%), Positives = 184/342 (53%), Gaps = 27/342 (7%)

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
           +L++  +K+  L  E+G+L+NL  L L +N L  LP EIG    L  LDL  NEL  +P 
Sbjct: 52  ILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPK 111

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +G L NL  L L +NRL  +P+ + +  +L   N++   L+ LP+ +   L ++  + L
Sbjct: 112 EIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKI-GQLQNLQVLNL 170

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
             NK T  P                    +KI      + +NL  +N + N LT+ P ++
Sbjct: 171 DLNKLTILP--------------------EKI-----GQLQNLQILNSQGNQLTTFPKEI 205

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G    L ELNLG N+++ L E++  L NL++L L +N L  LP  IG L KL+ L L  N
Sbjct: 206 GQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLSKLQKLYLYGN 265

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L +LP EIG LK+LQ L L +N L +LP+ I  L  L  L +  N + + P+EIG L+N
Sbjct: 266 QLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQN 325

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L L  N  L  +P E+    NLQ ++L+   L+ +P E+
Sbjct: 326 LQELNLGFNQ-LTTLPQEIGQLQNLQELNLEFNQLATLPKEV 366



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/351 (34%), Positives = 188/351 (53%), Gaps = 7/351 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS S +  L   + KL +L++LYL  N+L +LP++IG + NL  L L  N LT LP  
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+VL+L  N+L  LP  V +L +L++L L  N++  +   I  L NL +L++  
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDL 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+  LP ++G+L+NL  L+   N L   PKEIG    L  L+L  N L  + + +  L 
Sbjct: 173 NKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N L ++P+ + +   L +  + G  L++LP+  +  L  +  + L  N   
Sbjct: 233 NLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEE-IGQLKKLQELYLGNNPLR 291

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q   + ++  E NQI   P  I  + +NL ++N+  N LT+LP ++G    L
Sbjct: 292 TLPK-EIEQLQKLQTLYLEGNQITTFPKEI-GQLQNLQELNLGFNQLTTLPQEIGQLQNL 349

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL--KCL 454
            ELNL  NQ++ L +++  L  L  L L NN +      I  +RKL  KC+
Sbjct: 350 QELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIAS--EKIERIRKLLPKCI 398



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 178/330 (53%), Gaps = 5/330 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L L+ + +T LP  + +L +L+ L LY N+L  LP +IG + NL  L L  N 
Sbjct: 69  KLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNR 128

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT LPD +  LQ L+VL+L  NKL  LP  + +L +L++L L  N++  +   I  L NL
Sbjct: 129 LTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNL 188

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            +L+ + N++   P E+G+L+ L  L+L  N L  L +E+     L  LDL  N L  +P
Sbjct: 189 QILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLP 248

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L  L +L L  N+L ++PE + +   L E  +    L +LP   +  L  +  + 
Sbjct: 249 KEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKE-IEQLQKLQTLY 307

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           L  N+ T +P     Q  ++  +N   NQ+  +P  I  + +NL ++N++ N L +LP +
Sbjct: 308 LEGNQITTFPK-EIGQLQNLQELNLGFNQLTTLPQEI-GQLQNLQELNLEFNQLATLPKE 365

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
           +G    L +LNL  N I+  SE I+ +  L
Sbjct: 366 VGQLQKLRKLNLYNNPIA--SEKIERIRKL 393


>gi|255073607|ref|XP_002500478.1| predicted protein [Micromonas sp. RCC299]
 gi|226515741|gb|ACO61736.1| predicted protein [Micromonas sp. RCC299]
          Length = 383

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/335 (35%), Positives = 184/335 (54%), Gaps = 4/335 (1%)

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
            F     V  ++  LS L  L++  N++  LP E+G+L +L +L+L +N L  +P EI  
Sbjct: 14  EFGLTGAVPAELGRLSALMDLNLGGNQLTLLPAEIGQLASLESLELGYNELTSVPVEIWQ 73

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  L L  N+L ++P  +G L +L  L L  NRL SVP  + +   L + ++    L
Sbjct: 74  LASLEGLYLGGNQLTSVPAEIGQLTSLEDLSLEANRLTSVPTEIGQLTSLTQLDLRDNQL 133

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
           +S+P  +   LTS+  + L+ N+ T+ P+    Q TS+  +    N +  +P  I+  A 
Sbjct: 134 TSVPAEIWR-LTSLTYLNLNDNQLTSVPAE-IRQLTSLRELWLSANHLTSVPAEIWQLAA 191

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
            L K+++ +N LTS+P ++     LTEL L  NQ++ +  +I  L +L  L L +N L  
Sbjct: 192 -LVKLSVTENQLTSVPAEIWQLTSLTELYLHGNQLTSVPAEIGQLTSLTALSLYDNQLTS 250

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           +P+ IG +R L  L L  N+L SLP EIG L+ L    L  N L S+P  IGHLT+L+ L
Sbjct: 251 VPAEIGQIRSLVKLSLHGNRLTSLPAEIGQLRALVEFELDRNLLTSVPAEIGHLTSLTEL 310

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
           S+  N L S+P EIG L +L  L L+ N  L ++P
Sbjct: 311 SLHGNQLTSVPSEIGQLTSLGELSLSGNQ-LTSVP 344



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 199/361 (55%), Gaps = 7/361 (1%)

Query: 103 ILNLDLSKSSIT-HLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++ L+L +  +T  +P  + +L+ L +L L GN+L  LP++IG + +L  L L  N LTS
Sbjct: 7   VVELELKEFGLTGAVPAELGRLSALMDLNLGGNQLTLLPAEIGQLASLESLELGYNELTS 66

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  +  L  L  L L  N+L  +P  + +LTSL+ L L  NR+ +V  +I  L++L+ L
Sbjct: 67  VPVEIWQLASLEGLYLGGNQLTSVPAEIGQLTSLEDLSLEANRLTSVPTEIGQLTSLTQL 126

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +RDN++  +P E+  L +L  L+L  N L  +P EI   T L  L L  N L ++P  +
Sbjct: 127 DLRDNQLTSVPAEIWRLTSLTYLNLNDNQLTSVPAEIRQLTSLRELWLSANHLTSVPAEI 186

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L  L +L ++ N+L SVP  + +   L E  + G  L+S+P   +  LTS+  ++L  
Sbjct: 187 WQLAALVKLSVTENQLTSVPAEIWQLTSLTELYLHGNQLTSVP-AEIGQLTSLTALSLYD 245

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T+ P+    Q  S+  ++   N++  +P  I  + + L +  +  NLLTS+P ++G 
Sbjct: 246 NQLTSVPA-EIGQIRSLVKLSLHGNRLTSLPAEI-GQLRALVEFELDRNLLTSVPAEIGH 303

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC---LDLEE 458
              LTEL+L  NQ++ +  +I  L +L  L LS N L  +P+++  L    C   LDL+ 
Sbjct: 304 LTSLTELSLHGNQLTSVPSEIGQLTSLGELSLSGNQLTSVPAAMRELEAAGCYMDLDLDS 363

Query: 459 N 459
           +
Sbjct: 364 D 364



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 114/331 (34%), Positives = 171/331 (51%), Gaps = 27/331 (8%)

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           +P ELG L  L+ L+L  N L  LP EIG    L +L+L +NEL ++P  +  L +L  L
Sbjct: 21  VPAELGRLSALMDLNLGGNQLTLLPAEIGQLASLESLELGYNELTSVPVEIWQLASLEGL 80

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L  N+L SVP  + +                        LTS+ +++L  N+ T+ P+ 
Sbjct: 81  YLGGNQLTSVPAEIGQ------------------------LTSLEDLSLEANRLTSVPTE 116

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              Q TS+  ++   NQ+  +P  I+ R  +L+ +N+ DN LTS+P ++     L EL L
Sbjct: 117 -IGQLTSLTQLDLRDNQLTSVPAEIW-RLTSLTYLNLNDNQLTSVPAEIRQLTSLRELWL 174

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N ++ +  +I  L  L  L ++ N L  +P+ I  L  L  L L  N+L S+P EIG 
Sbjct: 175 SANHLTSVPAEIWQLAALVKLSVTENQLTSVPAEIWQLTSLTELYLHGNQLTSVPAEIGQ 234

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L  L L  NQL S+P  IG + +L  LS+  N L S+P EIG L  L    L+ N  
Sbjct: 235 LTSLTALSLYDNQLTSVPAEIGQIRSLVKLSLHGNRLTSLPAEIGQLRALVEFELDRN-L 293

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++P E+   ++L  +SL    L+ +PSEI
Sbjct: 294 LTSVPAEIGHLTSLTELSLHGNQLTSVPSEI 324


>gi|418668210|ref|ZP_13229613.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756067|gb|EKR17694.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 379

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/313 (37%), Positives = 180/313 (57%), Gaps = 4/313 (1%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLDL+ N  + LPKEIG    L  L+L  N+L  +P  +G L NL +L LS N+++++P+
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + K   L    +    L++LP  +   L  +  + L +N+ T  P     Q  ++ S+N
Sbjct: 112 EIEKLQKLQSLYLPNNQLTTLPQEI-GQLQKLQWLYLPKNQLTTLPQE-IGQLKNLKSLN 169

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQI  IP  I  + + L  + + +N LT+LP ++G    L  L+L TN+++ L ++I
Sbjct: 170 LSYNQIKTIPKEI-EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 228

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            +L NL+ L L +N L  LP+ I  L+ L+ L+L  N+L +L  EI  L+ L+ L L+SN
Sbjct: 229 GHLQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 288

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL + P+ IG L NL  L +G N L ++PE IG L+NL TL L+ N  L  +P E+    
Sbjct: 289 QLTTFPKGIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQ-LTTLPQEIGQLQ 347

Query: 543 NLQIMSLDNCPLS 555
           NLQ + L+N  LS
Sbjct: 348 NLQELFLNNNQLS 360



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 118/310 (38%), Positives = 173/310 (55%), Gaps = 7/310 (2%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+ + LP E+G+LKNL  L+L  N L  LPKEIG    L  L+L  N++  IP  
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNIT 338
           +  L  L  L L  N+L ++P+ + +   L    +    L++LP   G L +L S+N   
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLN--- 169

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           LS N+    P     +   + S+  ++NQ+  +P  I  + +NL  +++  N LT+LP +
Sbjct: 170 LSYNQIKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEI-GQLQNLQSLDLSTNRLTTLPQE 227

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L +L L +NQ++ L  +I+ L NL+ L L NN L  L   I  L+ LK LDL  
Sbjct: 228 IGHLQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRS 287

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L + P  IG LK LQ L L SNQL +LP  IG L NL  L +  N L ++P+EIG L+
Sbjct: 288 NQLTTFPKGIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQ 347

Query: 519 NLHTLYLNDN 528
           NL  L+LN+N
Sbjct: 348 NLQELFLNNN 357



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 121/350 (34%), Positives = 183/350 (52%), Gaps = 26/350 (7%)

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           T L  +L N  ++R LDL  N+   LP  + KL +L+ L L  N++  +  +I  L NL 
Sbjct: 38  TDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 97

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L++  N+I+ +P E+ +L+ L +L L +N L  LP+EIG    L  L L  N+L  +P 
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ 157

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +G L NL  L LSYN+++++P+ + K   L    ++   L++LP  +   L ++ ++ L
Sbjct: 158 EIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI-GQLQNLQSLDL 216

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           S N+ T  P                               +NL  + +  N LT LP ++
Sbjct: 217 STNRLTTLPQE-------------------------IGHLQNLQDLYLVSNQLTILPNEI 251

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
                L  LNL  N+++ LS++I+ L NL+ L L +N L   P  IG L+ L+ LDL  N
Sbjct: 252 RQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKGIGQLKNLQVLDLGSN 311

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
           +L +LP  IG LK LQ L L SNQL +LP+ IG L NL  L +  N L S
Sbjct: 312 QLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 361



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/328 (33%), Positives = 182/328 (55%), Gaps = 3/328 (0%)

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
            + T L  +++    +  L L  N+  +LP +IG + NL  L L +N LT LP  +  L+
Sbjct: 35  GTYTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLK 94

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
            LR L+L  N++  +P  + KL  L+ LYL  N++ T+  +I  L  L  L +  N++  
Sbjct: 95  NLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTT 154

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+G+LKNL +L+L++N ++ +PKEI     L +L L +N+L  +P  +G L NL  L
Sbjct: 155 LPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 214

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            LS NRL ++P+ +    +L +  +    L+ LP+  +  L ++  + L  N+ T   S 
Sbjct: 215 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNE-IRQLKNLQTLNLRNNRLTTL-SK 272

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              Q  ++ S++   NQ+   P GI  + KNL  +++  N LT+LP  +G    L  L+L
Sbjct: 273 EIEQLQNLKSLDLRSNQLTTFPKGI-GQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDL 331

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLL 438
            +NQ++ L ++I  L NL+ L L+NN L
Sbjct: 332 DSNQLTTLPQEIGQLQNLQELFLNNNQL 359



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/311 (34%), Positives = 175/311 (56%), Gaps = 3/311 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS +    LP  + KL +L+EL L  N+L  LP +IG + NL  L L+ N + ++P  
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L+ L L +N+L  LP  + +L  L+ LYL  N++ T+  +I  L NL  L++  
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I+ +P E+ +L+ L +L L +N L  LP+EIG    L +LDL  N L  +P  +G+L 
Sbjct: 173 NQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L  +P  + +  +L   N+    L++L    +  L ++ ++ L  N+ T
Sbjct: 233 NLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSKE-IEQLQNLKSLDLRSNQLT 291

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P  G  Q  ++  ++   NQ+  +P GI  + KNL  +++  N LT+LP ++G    L
Sbjct: 292 TFPK-GIGQLKNLQVLDLGSNQLTTLPEGI-GQLKNLQTLDLDSNQLTTLPQEIGQLQNL 349

Query: 406 TELNLGTNQIS 416
            EL L  NQ+S
Sbjct: 350 QELFLNNNQLS 360



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/199 (41%), Positives = 120/199 (60%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L+LS + I  +P  +EKL  L+ L L  N+L +LP +IG + NL  L L+ N LT
Sbjct: 163 KNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLT 222

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  + +LQ L+ L L  N+L  LP  + +L +L+ L LR NR+ T+  +I+ L NL  
Sbjct: 223 TLPQEIGHLQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSKEIEQLQNLKS 282

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +R N++   P  +G+LKNL  LDL  N L  LP+ IG    L TLDL  N+L  +P  
Sbjct: 283 LDLRSNQLTTFPKGIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 342

Query: 281 LGNLINLTRLRLSYNRLES 299
           +G L NL  L L+ N+L S
Sbjct: 343 IGQLQNLQELFLNNNQLSS 361



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 106/177 (59%), Gaps = 1/177 (0%)

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
           +++  N   +LP ++G    L ELNL  NQ++ L ++I  L NL  L LS N +K +P  
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
           I  L+KL+ L L  N+L +LP EIG L++LQ L L  NQL +LP+ IG L NL  L++  
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 172

Query: 505 NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N +++IP+EI  L+ L +L L DN  L  +P E+    NLQ + L    L+ +P EI
Sbjct: 173 NQIKTIPKEIEKLQKLQSLGL-DNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 228



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 92/169 (54%), Gaps = 24/169 (14%)

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK--- 472
           + L++ +QN + +  L LS N  K LP  IG L+ L+ L+L +N+L  LP EIG LK   
Sbjct: 38  TDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 97

Query: 473 --------------------ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
                               +LQ L L +NQL +LP+ IG L  L +L + +N L ++P+
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ 157

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           EIG L+NL +L L+ N  +  IP E+     LQ + LDN  L+ +P EI
Sbjct: 158 EIGQLKNLKSLNLSYNQ-IKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI 205



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 1/92 (1%)

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
           F+ ELQ    +S     L +A+ +   +  L +  N  +++P+EIG L+NL  L LN N 
Sbjct: 23  FIYELQAEESESGTYTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQ 82

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L  +P E+    NL+ ++L    +  IP EI
Sbjct: 83  -LTILPKEIGQLKNLRKLNLSANQIKTIPKEI 113


>gi|332026947|gb|EGI67044.1| Protein LAP2 [Acromyrmex echinatior]
          Length = 1016

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 221/466 (47%), Gaps = 50/466 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE++  L L+  ++  +PP V      LE+LYL  N++  LP  +     L  L L
Sbjct: 12  LRAQEEDVCELQLNHCNLYDVPPDVFIYERTLEKLYLDANRIRDLPRPLFQCHELRVLSL 71

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           ++N + +LP ++A+L  L  LDL  N + ELP  + +  SL+ + +  N  +     I +
Sbjct: 72  SDNEIATLPPAIASLINLEYLDLSKNSIKELPDSIKECKSLRSIDISVNPFERFPDAITH 131

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           +  L  L + D  I  LP   G L  L TL+L  N++  LPK +     L  LD+ +N+ 
Sbjct: 132 IVGLRELYINDAYIEYLPANFGRLSALRTLELRENNMMTLPKSMSRLVNLQRLDIGNNDF 191

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+++G+LINLT L +  N +  VP  + +   LN F+   C +              
Sbjct: 192 TELPEVVGDLINLTELWIDGNDIRRVPANVEQLYRLNHFD---CTM-------------- 234

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                                          N I  +P  I    +++  +N+  N +  
Sbjct: 235 -------------------------------NAIHALPMEIRG-WRDIGIMNLSSNEMYE 262

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  L     +  L +  NQ++ L  DI  + +LE L+++ N L+ LPSSIG LRKL CL
Sbjct: 263 LPDTLCYLRTIVTLKIDDNQLNALPNDIGQMSSLEELIITKNFLEYLPSSIGLLRKLHCL 322

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           + + N L +LP EIG    L  L L+SN L  +P  +GHL++L  L++  N ++ +P  +
Sbjct: 323 NADNNYLRALPAEIGSCTSLSLLSLRSNNLTRVPPELGHLSSLRVLNLVNNCIKFLPVSM 382

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
             L NL  L+L+DN     +P +        +M L    L Q P +
Sbjct: 383 LNLSNLKALWLSDNQSQPLVPLQQEFNCEEDMMVLSCFMLPQKPRQ 428



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 174/333 (52%), Gaps = 5/333 (1%)

Query: 230 ELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           ++PP++    + L  L L  N + +LP+ +  C  L  L L  NE+  +P  + +LINL 
Sbjct: 31  DVPPDVFIYERTLEKLYLDANRIRDLPRPLFQCHELRVLSLSDNEIATLPPAIASLINLE 90

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L LS N ++ +P+++ +C  L   ++        PD + + +  +  + ++ + +  Y 
Sbjct: 91  YLDLSKNSIKELPDSIKECKSLRSIDISVNPFERFPDAI-THIVGLRELYIN-DAYIEYL 148

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                + +++ ++    N +  +P  + SR  NL ++++ +N  T LP  +G  + LTEL
Sbjct: 149 PANFGRLSALRTLELRENNMMTLPKSM-SRLVNLQRLDIGNNDFTELPEVVGDLINLTEL 207

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
            +  N I ++  +++ L  L     + N +  LP  I   R +  ++L  N++  LP+ +
Sbjct: 208 WIDGNDIRRVPANVEQLYRLNHFDCTMNAIHALPMEIRGWRDIGIMNLSSNEMYELPDTL 267

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            +L+ +  L +  NQL +LP  IG +++L  L + +N L+ +P  IG L  LH L   DN
Sbjct: 268 CYLRTIVTLKIDDNQLNALPNDIGQMSSLEELIITKNFLEYLPSSIGLLRKLHCLNA-DN 326

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             L  +P E+  C++L ++SL +  L+++P E+
Sbjct: 327 NYLRALPAEIGSCTSLSLLSLRSNNLTRVPPEL 359


>gi|124002073|ref|ZP_01686927.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992539|gb|EAY31884.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 506

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 137/395 (34%), Positives = 208/395 (52%), Gaps = 26/395 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD     +T LPP V  LT+L +L L  N+L  LP++IG +T L  L + +N L++L   
Sbjct: 110 LDCMAIGLTILPPEVGALTNLYKLRLNRNELTILPAEIGNLTKLQELYITDNRLSALSAE 169

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + NL QL+ L+L  N+L  LP  + KLT LK L +  N++ T+  +I  L++L  L + +
Sbjct: 170 IGNLTQLQKLELAVNRLVALPAEIGKLTQLKKLEVGSNQLTTLPAEISGLTSLEELYIDN 229

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+   LP E+G L NL  L ++ N L  LP EIGN T L  L ++ N+L+ +P  +G L 
Sbjct: 230 NQFTTLPTEIGTLSNLKFLYVSDNQLATLPSEIGNLTTLQELYIEENQLIALPAEIGTLQ 289

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L  L L  N+L  +P  +     L    +E   L++LP+  +  L  +  + + +N   
Sbjct: 290 SLQLLHLQSNQLSELPTEIGLVGDLRILCLEENLLTTLPNT-IGQLKCLEELRIWKNDLV 348

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           A P                  +ID +        KNL  +++  N L++ PL +    GL
Sbjct: 349 ALPL-----------------EIDSL--------KNLHTLDISFNKLSTFPLQITQLEGL 383

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            +LN+  N ++ L ++I  LV LE L L  N L  LP+ +  L+KL+ LDL  N+LE LP
Sbjct: 384 QKLNVAENGLTDLPDEINQLVKLEELNLGGNNLTSLPAGLAKLQKLQNLDLRYNELEVLP 443

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           +E+  L  LQ L L  N L ++P  I  L  L YL
Sbjct: 444 SEVFALSNLQELNLMGNYLTTIPVEITKLKKLQYL 478



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 128/369 (34%), Positives = 193/369 (52%), Gaps = 10/369 (2%)

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L L +  I  +  +I  L++L  L      +  LPPE+G L NL  L L  N L  LP E
Sbjct: 87  LNLSYKHISVLPAEIAGLTHLQKLDCMAIGLTILPPEVGALTNLYKLRLNRNELTILPAE 146

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           IGN T L  L +  N L  +   +GNL  L +L L+ NRL ++P  + K   L +  V  
Sbjct: 147 IGNLTKLQELYITDNRLSALSAEIGNLTQLQKLELAVNRLVALPAEIGKLTQLKKLEVGS 206

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH---NQIDKIPYG 374
             L++LP   +S LTS+  + +  N+FT  P    T+  ++ ++ F +   NQ+  +P  
Sbjct: 207 NQLTTLP-AEISGLTSLEELYIDNNQFTTLP----TEIGTLSNLKFLYVSDNQLATLPSE 261

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           I      L ++ +++N L +LP ++GT   L  L+L +NQ+S+L  +I  + +L +L L 
Sbjct: 262 I-GNLTTLQELYIEENQLIALPAEIGTLQSLQLLHLQSNQLSELPTEIGLVGDLRILCLE 320

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
            NLL  LP++IG L+ L+ L + +N L +LP EI  LK L  L +  N+L + P  I  L
Sbjct: 321 ENLLTTLPNTIGQLKCLEELRIWKNDLVALPLEIDSLKNLHTLDISFNKLSTFPLQITQL 380

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
             L  L+V EN L  +P+EI  L  L  L L  N  L ++P  LA    LQ + L    L
Sbjct: 381 EGLQKLNVAENGLTDLPDEINQLVKLEELNLGGNN-LTSLPAGLAKLQKLQNLDLRYNEL 439

Query: 555 SQIPSEIVV 563
             +PSE+  
Sbjct: 440 EVLPSEVFA 448



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 138/451 (30%), Positives = 208/451 (46%), Gaps = 50/451 (11%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   I+ LP  +  LTHL++L      L  LP ++G                    +
Sbjct: 87  LNLSYKHISVLPAEIAGLTHLQKLDCMAIGLTILPPEVG--------------------A 126

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L NL +LR   L  N+L  LP  +  LT L+ LY+  NR+  +  +I  L+ L  L +  
Sbjct: 127 LTNLYKLR---LNRNELTILPAEIGNLTKLQELYITDNRLSALSAEIGNLTQLQKLELAV 183

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L  L  L++  N L  LP EI   T L  L + +N+   +P  +G L 
Sbjct: 184 NRLVALPAEIGKLTQLKKLEVGSNQLTTLPAEISGLTSLEELYIDNNQFTTLPTEIGTLS 243

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L +S N+L ++P  +     L E  +E                         N+  
Sbjct: 244 NLKFLYVSDNQLATLPSEIGNLTTLQELYIE------------------------ENQLI 279

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           A P+   T  +       + NQ+ ++P  I     +L  + +++NLLT+LP  +G    L
Sbjct: 280 ALPAEIGTLQSLQLLH-LQSNQLSELPTEI-GLVGDLRILCLEENLLTTLPNTIGQLKCL 337

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            EL +  N +  L  +I +L NL  L +S N L   P  I  L  L+ L++ EN L  LP
Sbjct: 338 EELRIWKNDLVALPLEIDSLKNLHTLDISFNKLSTFPLQITQLEGLQKLNVAENGLTDLP 397

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
           +EI  L +L+ L L  N L SLP  +  L  L  L +  N L+ +P E+  L NL  L L
Sbjct: 398 DEINQLVKLEELNLGGNNLTSLPAGLAKLQKLQNLDLRYNELEVLPSEVFALSNLQELNL 457

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQ 556
             N  L  IP E+     LQ + L +  +S+
Sbjct: 458 MGN-YLTTIPVEITKLKKLQYLYLQHGLISE 487



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/322 (33%), Positives = 172/322 (53%), Gaps = 4/322 (1%)

Query: 240 NLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLES 299
           N   L+L++ H+  LP EI   T L  LD     L  +P  +G L NL +LRL+ N L  
Sbjct: 83  NQAKLNLSYKHISVLPAEIAGLTHLQKLDCMAIGLTILPPEVGALTNLYKLRLNRNELTI 142

Query: 300 VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVY 359
           +P  +     L E  +    LS+L    + +LT +  + L+ N+  A P+    + T + 
Sbjct: 143 LPAEIGNLTKLQELYITDNRLSAL-SAEIGNLTQLQKLELAVNRLVALPAE-IGKLTQLK 200

Query: 360 SINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS 419
            +    NQ+  +P  I S   +L ++ + +N  T+LP ++GT   L  L +  NQ++ L 
Sbjct: 201 KLEVGSNQLTTLPAEI-SGLTSLEELYIDNNQFTTLPTEIGTLSNLKFLYVSDNQLATLP 259

Query: 420 EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLIL 479
            +I NL  L+ L +  N L  LP+ IG L+ L+ L L+ N+L  LP EIG + +L+ L L
Sbjct: 260 SEIGNLTTLQELYIEENQLIALPAEIGTLQSLQLLHLQSNQLSELPTEIGLVGDLRILCL 319

Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
           + N L +LP  IG L  L  L + +N+L ++P EI +L+NLHTL ++ N  L+  P ++ 
Sbjct: 320 EENLLTTLPNTIGQLKCLEELRIWKNDLVALPLEIDSLKNLHTLDISFNK-LSTFPLQIT 378

Query: 540 LCSNLQIMSLDNCPLSQIPSEI 561
               LQ +++    L+ +P EI
Sbjct: 379 QLEGLQKLNVAENGLTDLPDEI 400



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 162/293 (55%), Gaps = 3/293 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++  + +T LP  +  LT LEELY+  N+  +LP++IG ++NL  L +++N L +LP  
Sbjct: 202 LEVGSNQLTTLPAEISGLTSLEELYIDNNQFTTLPTEIGTLSNLKFLYVSDNQLATLPSE 261

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + NL  L+ L +  N+L  LP  +  L SL++L+L+ N++  +  +I  + +L +L + +
Sbjct: 262 IGNLTTLQELYIEENQLIALPAEIGTLQSLQLLHLQSNQLSELPTEIGLVGDLRILCLEE 321

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N +  LP  +G+LK L  L +  N L  LP EI +   L TLD+  N+L   P  +  L 
Sbjct: 322 NLLTTLPNTIGQLKCLEELRIWKNDLVALPLEIDSLKNLHTLDISFNKLSTFPLQITQLE 381

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L +L ++ N L  +P+ +++ V L E N+ G  L+SLP G L+ L  + N+ L  N+  
Sbjct: 382 GLQKLNVAENGLTDLPDEINQLVKLEELNLGGNNLTSLPAG-LAKLQKLQNLDLRYNELE 440

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
             PS      +++  +N   N +  IP  I ++ K L  + ++  L++   L+
Sbjct: 441 VLPS-EVFALSNLQELNLMGNYLTTIPVEI-TKLKKLQYLYLQHGLISEQELE 491



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 93/282 (32%), Positives = 149/282 (52%), Gaps = 12/282 (4%)

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           + N  +L LSY  +  +P  ++   HL + +     L+ LP  +  +LT++  + L+RN+
Sbjct: 81  VFNQAKLNLSYKHISVLPAEIAGLTHLQKLDCMAIGLTILPPEV-GALTNLYKLRLNRNE 139

Query: 344 FTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
            T  P+  G  T+   +Y      N++  +   I +  + L K+ +  N L +LP ++G 
Sbjct: 140 LTILPAEIGNLTKLQELY---ITDNRLSALSAEIGNLTQ-LQKLELAVNRLVALPAEIGK 195

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L +L +G+NQ++ L  +I  L +LE L + NN    LP+ IG L  LK L + +N+L
Sbjct: 196 LTQLKKLEVGSNQLTTLPAEISGLTSLEELYIDNNQFTTLPTEIGTLSNLKFLYVSDNQL 255

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            +LP+EIG L  LQ L ++ NQL++LP  IG L +L  L +  N L  +P EIG + +L 
Sbjct: 256 ATLPSEIGNLTTLQELYIEENQLIALPAEIGTLQSLQLLHLQSNQLSELPTEIGLVGDLR 315

Query: 522 TLYLNDN--TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L L +N  T L N   +L     L+I   D   L  +P EI
Sbjct: 316 ILCLEENLLTTLPNTIGQLKCLEELRIWKND---LVALPLEI 354



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/185 (40%), Positives = 112/185 (60%), Gaps = 1/185 (0%)

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           NL K+ +  N LT LP ++G    L EL +  N++S LS +I NL  L+ L L+ N L  
Sbjct: 129 NLYKLRLNRNELTILPAEIGNLTKLQELYITDNRLSALSAEIGNLTQLQKLELAVNRLVA 188

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           LP+ IG L +LK L++  N+L +LP EI  L  L+ L + +NQ  +LP  IG L+NL +L
Sbjct: 189 LPAEIGKLTQLKKLEVGSNQLTTLPAEISGLTSLEELYIDNNQFTTLPTEIGTLSNLKFL 248

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
            V +N L ++P EIG L  L  LY+ +N  +  +P E+    +LQ++ L +  LS++P+E
Sbjct: 249 YVSDNQLATLPSEIGNLTTLQELYIEENQLI-ALPAEIGTLQSLQLLHLQSNQLSELPTE 307

Query: 561 IVVGG 565
           I + G
Sbjct: 308 IGLVG 312



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 99/212 (46%), Gaps = 26/212 (12%)

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
           +  ++R       ++KD  L SL ++        +LNL    IS L  +I  L +L+ L 
Sbjct: 54  WNTWARTLEAPNTDVKD--LESLEVEHIMVFNQAKLNLSYKHISVLPAEIAGLTHLQKLD 111

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP-----------------------NEIG 469
                L  LP  +G L  L  L L  N+L  LP                        EIG
Sbjct: 112 CMAIGLTILPPEVGALTNLYKLRLNRNELTILPAEIGNLTKLQELYITDNRLSALSAEIG 171

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            L +LQ+L L  N+LV+LP  IG LT L  L VG N L ++P EI  L +L  LY+ DN 
Sbjct: 172 NLTQLQKLELAVNRLVALPAEIGKLTQLKKLEVGSNQLTTLPAEISGLTSLEELYI-DNN 230

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
               +P E+   SNL+ + + +  L+ +PSEI
Sbjct: 231 QFTTLPTEIGTLSNLKFLYVSDNQLATLPSEI 262


>gi|149705930|ref|XP_001491554.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387 [Equus caballus]
          Length = 870

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 242/483 (50%), Gaps = 30/483 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L++S + I+H+P  + +L ++ +L+L  N + + PS +  + N+  L LA+N L  
Sbjct: 222 NLRILNVSHNQISHIPKEILQLGNIRQLFLNNNYIENFPSDLESLGNVEILSLAKNKLRH 281

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV------------- 208
           +PDSL++L+ L VL+L +N+L   P  +  L  L  L L  N I ++             
Sbjct: 282 IPDSLSSLKNLSVLNLGYNQLTIFPKALCFLPKLISLNLTGNLISSLPKEIRELKNLEKL 341

Query: 209 ---HPDIQYLS-------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
              H  + +L+        +  L + DNK+  +  ++   + L  L L  N L+ELP++I
Sbjct: 342 LLDHNKLTFLAVEIFQLLKMKELQLTDNKLEVISHKIENFRELRILILDKNVLKELPEKI 401

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
            +C ML  L L  N L  +P  +  L NL +L ++ N    +P+ +S   ++      G 
Sbjct: 402 SHCVMLECLSLSDNNLTELPKNIHKLKNLRKLHVNRNNRVRIPDDISHLNNMVSLEFSGN 461

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
            L+ +P   + +   I  + LS NK   +P  G     S++ ++F  N I +IP  I S 
Sbjct: 462 ILTDVPIE-IKNCRKITKVELSYNKMMYFPV-GLCALDSLHYLSFNGNYISEIPVDI-SF 518

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
           +K L  +   +N L      L + + L  L+LG N I K+   I N+V+L VL+L  N  
Sbjct: 519 SKQLLHLEFNENKLLIFSEHLCSLINLKYLDLGKNHIRKIPPSISNMVSLRVLILCCNKF 578

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           +  P     L  L+ LDL EN+++ +P+EI  LK +Q+L + SNQ +  P  +  L +L 
Sbjct: 579 ETFPVEACTLENLQVLDLSENQIQKIPSEICNLKGIQKLNISSNQFIYFPIELCQLKSLE 638

Query: 499 YLSVGENN---LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            L++ + N   L  +PEE+  +  L  L +++N  +  IP  +    +L  ++  N  +S
Sbjct: 639 ELNISQTNGRKLTRLPEELSNMIQLKGLDISNNA-VREIPRNIGELRSLVSLNACNNQIS 697

Query: 556 QIP 558
            +P
Sbjct: 698 YLP 700



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 190/392 (48%), Gaps = 34/392 (8%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH-PDIQYLSNLSMLSMRDNKIRELP 232
            ++L+   L E P  + K   +K LYL  N+IK+    D   L  L +LS+++N +  LP
Sbjct: 155 TVNLKAKGLQEFPKDILKTKYVKYLYLDKNQIKSFKGADSSDLPGLEILSLQENGLSSLP 214

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            E+  L NL  L+++HN +  +PKEI     +  L L +N + N P  L +L N+  L L
Sbjct: 215 SEIQLLHNLRILNVSHNQISHIPKEILQLGNIRQLFLNNNYIENFPSDLESLGNVEILSL 274

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           + N+L  +P++                        LSSL +++ + L  N+ T +P    
Sbjct: 275 AKNKLRHIPDS------------------------LSSLKNLSVLNLGYNQLTIFPK-AL 309

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD-NLLTSLPLDLGTWVGLTELNLG 411
                + S+N   N I  +P  I  R     +  + D N LT L +++   + + EL L 
Sbjct: 310 CFLPKLISLNLTGNLISSLPKEI--RELKNLEKLLLDHNKLTFLAVEIFQLLKMKELQLT 367

Query: 412 TNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
            N++  +S  I+N   L +L+L  N+LK+LP  I +   L+CL L +N L  LP  I  L
Sbjct: 368 DNKLEVISHKIENFRELRILILDKNVLKELPEKISHCVMLECLSLSDNNLTELPKNIHKL 427

Query: 472 KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
           K L++L +  N  V +P  I HL N+  L    N L  +P EI     +  + L+ N  +
Sbjct: 428 KNLRKLHVNRNNRVRIPDDISHLNNMVSLEFSGNILTDVPIEIKNCRKITKVELSYNKMM 487

Query: 532 NNIPFELALCS--NLQIMSLDNCPLSQIPSEI 561
               F + LC+  +L  +S +   +S+IP +I
Sbjct: 488 Y---FPVGLCALDSLHYLSFNGNYISEIPVDI 516



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 164/328 (50%), Gaps = 5/328 (1%)

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM-LGNLINLTRLRLS 293
           LG      T++L    L+E PK+I     +  L L  N++ +       +L  L  L L 
Sbjct: 147 LGSESGNFTVNLKAKGLQEFPKDILKTKYVKYLYLDKNQIKSFKGADSSDLPGLEILSLQ 206

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
            N L S+P  +    +L   NV    +S +P  +L  L +I  + L+ N    +PS   +
Sbjct: 207 ENGLSSLPSEIQLLHNLRILNVSHNQISHIPKEIL-QLGNIRQLFLNNNYIENFPSDLES 265

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
              +V  ++   N++  IP  + S  KNLS +N+  N LT  P  L     L  LNL  N
Sbjct: 266 -LGNVEILSLAKNKLRHIPDSL-SSLKNLSVLNLGYNQLTIFPKALCFLPKLISLNLTGN 323

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
            IS L ++I+ L NLE L+L +N L  L   I  L K+K L L +NKLE + ++I   +E
Sbjct: 324 LISSLPKEIRELKNLEKLLLDHNKLTFLAVEIFQLLKMKELQLTDNKLEVISHKIENFRE 383

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L+ LIL  N L  LP  I H   L  LS+ +NNL  +P+ I  L+NL  L++N N  +  
Sbjct: 384 LRILILDKNVLKELPEKISHCVMLECLSLSDNNLTELPKNIHKLKNLRKLHVNRNNRV-R 442

Query: 534 IPFELALCSNLQIMSLDNCPLSQIPSEI 561
           IP +++  +N+  +      L+ +P EI
Sbjct: 443 IPDDISHLNNMVSLEFSGNILTDVPIEI 470


>gi|294828111|ref|NP_712624.2| hypothetical protein LA_2443 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074462|ref|YP_005988779.1| hypothetical protein LIF_A2004 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|293385958|gb|AAN49642.2| hypothetical protein LA_2443 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458251|gb|AER02796.1| hypothetical protein LIF_A2004 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|456825302|gb|EMF73698.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 488

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 148/434 (34%), Positives = 235/434 (54%), Gaps = 11/434 (2%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS+      P  + +L +LE L L  N++ +LP +I  + NL  L L  N LT 
Sbjct: 38  NVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITTLPREINKLKNLKELYLNGNKLTI 97

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  +  L+ L +L L +N+++ LP  + K  +L+ L LR NR+ T+  +I  L  L  L
Sbjct: 98  VPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEEL 157

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++ +N+I+ LP E+G L+NL   +L+ N L  +PKEIGN   L  L L++N+L  +P  +
Sbjct: 158 NLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQM 217

Query: 282 GNLINLTRLRLSYNRL-----ESVPETLSKC-VHLNEFNVEGCALSSLPDGLLSSLTSIN 335
             L +L  L L  N L     + +   L  C + L +   EG    +L   L   L  I 
Sbjct: 218 EKLQDLEVLNLLINPLLSKERKKIQALLPDCDIDLRDVE-EGETYRNLNLALEQPL-KIL 275

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
           +++L   +F  + S    +  ++ S++     +  +P  I  R K+L  +++  N L SL
Sbjct: 276 SLSLEYQQFPLF-SKEILRLKNLRSLSLYDTSLVALPKEIV-RLKHLEHLSLGLNQLKSL 333

Query: 396 PLDLGTWVGLTELNLGT-NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           P ++G    L  L++G  N+   L ++I  L NL  L+L+ N  K  P  I  L+KL  L
Sbjct: 334 PKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVIL 393

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           ++  N+L++LP +IG LK LQ L L  N+L +LP  IG L NL+ L +  N ++++PEEI
Sbjct: 394 NVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEI 453

Query: 515 GTLENLHTLYLNDN 528
             L+NL  L L +N
Sbjct: 454 ARLQNLRKLTLYEN 467



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 154/440 (35%), Positives = 228/440 (51%), Gaps = 26/440 (5%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L   K A  P +I  +  L  L L EN +T+LP  +  L+ L+ L L  NKL  +P  
Sbjct: 42  LDLSRQKFAVFPKEIWELEYLEILKLEENRITTLPREINKLKNLKELYLNGNKLTIVPKE 101

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           +++L +L IL L  NRI T+  +I+   NL  L++R N++  LP E+GELK L  L+L +
Sbjct: 102 IWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLEN 161

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N ++ LP EIG    L   +L  N+L +IP  +GNL NL  L L  N+L+++P  + K  
Sbjct: 162 NRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQ 221

Query: 309 HLNEFNVEGCALSS---------LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVY 359
            L   N+    L S         LPD  +  L  +      RN   A       Q   + 
Sbjct: 222 DLEVLNLLINPLLSKERKKIQALLPDCDI-DLRDVEEGETYRNLNLAL-----EQPLKIL 275

Query: 360 SINFEHNQIDKIPYGIFS----RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
           S++ E+ Q     + +FS    R KNL  +++ D  L +LP ++     L  L+LG NQ+
Sbjct: 276 SLSLEYQQ-----FPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQL 330

Query: 416 SKLSEDIQNLVNLEVL-VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
             L ++I  L NL  L + +NN  + LP  I  L+ L+ L L +N+ +  P EI  LK+L
Sbjct: 331 KSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKL 390

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
             L + +NQL +LP  IG L  L  L +  N L ++P EIG L NL  LYL  N  +  +
Sbjct: 391 VILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNR-IKTL 449

Query: 535 PFELALCSNLQIMSLDNCPL 554
           P E+A   NL+ ++L   P+
Sbjct: 450 PEEIARLQNLRKLTLYENPI 469



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 162/367 (44%), Gaps = 82/367 (22%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGY--------------- 145
           EN+  L L  + I+ LP  +EK  +L+EL L GN+L +LP +IG                
Sbjct: 106 ENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIK 165

Query: 146 --------VTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
                   + NL    L+ N L S+P  + NLQ LR+L L +N+L  LP  + KL  L++
Sbjct: 166 ILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 225

Query: 198 LYLRFN--------RIKTVHPD-------------------------------------- 211
           L L  N        +I+ + PD                                      
Sbjct: 226 LNLLINPLLSKERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFP 285

Query: 212 -----IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
                I  L NL  LS+ D  +  LP E+  LK+L  L L  N L+ LPKEIG    L +
Sbjct: 286 LFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRS 345

Query: 267 LDL-QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
           LD+  +NE   +P  +  L NL  L L+ NR +  P+ + +   L   NV    L +LP+
Sbjct: 346 LDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPE 405

Query: 326 GLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
             +  L  +  + LS N+ T  PS  G     T +Y    ++N+I  +P  I +R +NL 
Sbjct: 406 K-IGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELY---LQYNRIKTLPEEI-ARLQNLR 460

Query: 384 KVNMKDN 390
           K+ + +N
Sbjct: 461 KLTLYEN 467



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 190/402 (47%), Gaps = 41/402 (10%)

Query: 193 TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLE 252
           ++++IL L   +      +I  L  L +L + +N+I  LP E+ +LKNL  L L  N L 
Sbjct: 37  SNVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITTLPREINKLKNLKELYLNGNKLT 96

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
            +PKEI     L  L L++N +  +P  +    NL  L L  NRL ++P  + +   L E
Sbjct: 97  IVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEE 156

Query: 313 FNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQI 368
            N+E   +  LP+  G L +L   N   LS NK  + P   G       +Y    E+NQ+
Sbjct: 157 LNLENNRIKILPNEIGALENLWIFN---LSGNKLASIPKEIGNLQNLRMLY---LENNQL 210

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTS----------------------------LPLDLG 400
             +P  +  + ++L  +N+  N L S                            L L L 
Sbjct: 211 KTLPRQM-EKLQDLEVLNLLINPLLSKERKKIQALLPDCDIDLRDVEEGETYRNLNLALE 269

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
             + +  L+L   Q    S++I  L NL  L L +  L  LP  I  L+ L+ L L  N+
Sbjct: 270 QPLKILSLSLEYQQFPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQ 329

Query: 461 LESLPNEIGFLKELQRL-ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           L+SLP EIG L+ L+ L I  +N+   LP+ I  L NL  L + +N  +  P+EI  L+ 
Sbjct: 330 LKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKK 389

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L +N N  L+ +P ++     LQ++ L +  L+ +PSEI
Sbjct: 390 LVILNVNTNQ-LDALPEKIGRLKGLQMLDLSHNRLTTLPSEI 430


>gi|429961438|gb|ELA40983.1| hypothetical protein VICG_02013 [Vittaforma corneae ATCC 50505]
          Length = 875

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 142/438 (32%), Positives = 223/438 (50%), Gaps = 39/438 (8%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           +Y +GN          Y  N T + +    +TS+  ++  L +L  L+L HN L  LP  
Sbjct: 36  IYSFGN----------YPENETVISICRQGITSIDSNIKRLVKLEKLELSHNNLKALPSE 85

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +L+ L L  N++KT+   I  L NLS L + DN++  LP  +GEL+NL  LDL  
Sbjct: 86  IGELKNLQHLVLSNNKLKTLSDVIGELENLSTLHLDDNELETLPAAIGELENLRDLDLGD 145

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N  E                       + P ++  L NL RL L  N+LES P  +++  
Sbjct: 146 NQFE-----------------------SFPTVIRKLKNLERLILDNNKLESFPTVIAELR 182

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
            L    + G  L  LPD  +  L ++  + LS NK  + P     +  ++  +    N++
Sbjct: 183 KLQTLELLGNKLKLLPDE-IGELKNLQYLNLSLNKLESLPP-EIGELKNLQHLFLGDNKL 240

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
           + +P  I    +NL K+ +  N L +LP+++     L  L L  N++  L  +I+ L  L
Sbjct: 241 EILPIAI-GELENLQKLYLHRNNLKTLPVEIEKLKELRILQLSGNKLETLPVEIEKLKEL 299

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
            +L LS N L+ LP +IG L  L+ L L +NKLE+LP  IG L  L+ L L++N+L  LP
Sbjct: 300 RILQLSGNKLETLPVAIGELENLQKLYLNDNKLETLPAAIGELDNLRELCLRNNKLKILP 359

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFEL-ALCSNLQIM 547
             IG L +L YL +  N L+++P  IG L+NL  L L+ N  L  +P E+  L  ++Q++
Sbjct: 360 SEIGELGDLQYLDLKNNKLETLPAAIGELKNLRELNLSGNK-LETLPIEIEKLSGSMQLL 418

Query: 548 SLDNCPLSQI-PSEIVVG 564
           +L    +S++   E  VG
Sbjct: 419 NLRGNNISEVGDGERTVG 436



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 140/408 (34%), Positives = 202/408 (49%), Gaps = 50/408 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS +++  LP  + +L +L+ L L  NKL +L   IG + NL+ L L +N L +LP +
Sbjct: 72  LELSHNNLKALPSEIGELKNLQHLVLSNNKLKTLSDVIGELENLSTLHLDDNELETLPAA 131

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ LR LDL  N+    P V+ KL +L+ L L  N++++    I  L  L  L +  
Sbjct: 132 IGELENLRDLDLGDNQFESFPTVIRKLKNLERLILDNNKLESFPTVIAELRKLQTLELLG 191

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK++ LP E+GELKNL  L+L+ N LE LP EIG    L  L L  N+L  +P  +G L 
Sbjct: 192 NKLKLLPDEIGELKNLQYLNLSLNKLESLPPEIGELKNLQHLFLGDNKLEILPIAIGELE 251

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL +L L  N L+++P  + K   L    + G  L +LP   +  L  +  + LS NK  
Sbjct: 252 NLQKLYLHRNNLKTLPVEIEKLKELRILQLSGNKLETLPVE-IEKLKELRILQLSGNKLE 310

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                               +NL K+ + DN L +LP  +G     
Sbjct: 311 TLPVA-------------------------IGELENLQKLYLNDNKLETLPAAIG----- 340

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
                              L NL  L L NN LK LPS IG L  L+ LDL+ NKLE+LP
Sbjct: 341 ------------------ELDNLRELCLRNNKLKILPSEIGELGDLQYLDLKNNKLETLP 382

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLT-NLSYLSVGENNLQSIPE 512
             IG LK L+ L L  N+L +LP  I  L+ ++  L++  NN+  + +
Sbjct: 383 AAIGELKNLRELNLSGNKLETLPIEIEKLSGSMQLLNLRGNNISEVGD 430



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/229 (41%), Positives = 136/229 (59%), Gaps = 5/229 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS + +  LPP + +L +L+ L+L  NKL  LP  IG + NL  L L  N+L 
Sbjct: 205 KNLQYLNLSLNKLESLPPEIGELKNLQHLFLGDNKLEILPIAIGELENLQKLYLHRNNLK 264

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L++LR+L L  NKL  LP+ + KL  L+IL L  N+++T+   I  L NL  
Sbjct: 265 TLPVEIEKLKELRILQLSGNKLETLPVEIEKLKELRILQLSGNKLETLPVAIGELENLQK 324

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DNK+  LP  +GEL NL  L L +N L+ LP EIG    L  LDL++N+L  +P  
Sbjct: 325 LYLNDNKLETLPAAIGELDNLRELCLRNNKLKILPSEIGELGDLQYLDLKNNKLETLPAA 384

Query: 281 LGNLINLTRLRLSYNRLESVP---ETLSKCVHLNEFNVEGCALSSLPDG 326
           +G L NL  L LS N+LE++P   E LS  + L   N+ G  +S + DG
Sbjct: 385 IGELKNLRELNLSGNKLETLPIEIEKLSGSMQL--LNLRGNNISEVGDG 431



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 170/325 (52%), Gaps = 3/325 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L LS + +  L   + +L +L  L+L  N+L +LP+ IG + NL  L L +N   
Sbjct: 90  KNLQHLVLSNNKLKTLSDVIGELENLSTLHLDDNELETLPAAIGELENLRDLDLGDNQFE 149

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           S P  +  L+ L  L L +NKL   P V+ +L  L+ L L  N++K +  +I  L NL  
Sbjct: 150 SFPTVIRKLKNLERLILDNNKLESFPTVIAELRKLQTLELLGNKLKLLPDEIGELKNLQY 209

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  NK+  LPPE+GELKNL  L L  N LE LP  IG    L  L L  N L  +P  
Sbjct: 210 LNLSLNKLESLPPEIGELKNLQHLFLGDNKLEILPIAIGELENLQKLYLHRNNLKTLPVE 269

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  L  L+LS N+LE++P  + K   L    + G  L +LP   +  L ++  + L+
Sbjct: 270 IEKLKELRILQLSGNKLETLPVEIEKLKELRILQLSGNKLETLPVA-IGELENLQKLYLN 328

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            NK    P+    +  ++  +   +N++  +P  I     +L  +++K+N L +LP  +G
Sbjct: 329 DNKLETLPA-AIGELDNLRELCLRNNKLKILPSEI-GELGDLQYLDLKNNKLETLPAAIG 386

Query: 401 TWVGLTELNLGTNQISKLSEDIQNL 425
               L ELNL  N++  L  +I+ L
Sbjct: 387 ELKNLRELNLSGNKLETLPIEIEKL 411



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 146/276 (52%), Gaps = 13/276 (4%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+L  + +  LP  + +L +L+ L L  NKL SLP +IG + NL  L L +N L  LP +
Sbjct: 187 LELLGNKLKLLPDEIGELKNLQYLNLSLNKLESLPPEIGELKNLQHLFLGDNKLEILPIA 246

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L  N L  LP+ + KL  L+IL L  N+++T+  +I+ L  L +L +  
Sbjct: 247 IGELENLQKLYLHRNNLKTLPVEIEKLKELRILQLSGNKLETLPVEIEKLKELRILQLSG 306

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+  LP  +GEL+NL  L L  N LE LP  IG    L  L L++N+L  +P  +G L 
Sbjct: 307 NKLETLPVAIGELENLQKLYLNDNKLETLPAAIGELDNLRELCLRNNKLKILPSEIGELG 366

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L  L L  N+LE++P  + +  +L E N+ G  L +LP  +     S+  + L  N  +
Sbjct: 367 DLQYLDLKNNKLETLPAAIGELKNLRELNLSGNKLETLPIEIEKLSGSMQLLNLRGNNIS 426

Query: 346 AYPSG----GPTQFTSVY---------SINFEHNQI 368
               G    G  +  +++         S+ +E ++I
Sbjct: 427 EVGDGERTVGRRELRAIFGDRVVLSSNSVEYEEDEI 462



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/276 (34%), Positives = 142/276 (51%), Gaps = 1/276 (0%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L L  + +   P  + +L  L+ L L GNKL  LP +IG + NL  L L+ N 
Sbjct: 157 KLKNLERLILDNNKLESFPTVIAELRKLQTLELLGNKLKLLPDEIGELKNLQYLNLSLNK 216

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L SLP  +  L+ L+ L L  NKL  LP+ + +L +L+ LYL  N +KT+  +I+ L  L
Sbjct: 217 LESLPPEIGELKNLQHLFLGDNKLEILPIAIGELENLQKLYLHRNNLKTLPVEIEKLKEL 276

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            +L +  NK+  LP E+ +LK L  L L+ N LE LP  IG    L  L L  N+L  +P
Sbjct: 277 RILQLSGNKLETLPVEIEKLKELRILQLSGNKLETLPVAIGELENLQKLYLNDNKLETLP 336

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L NL  L L  N+L+ +P  + +   L   +++   L +LP   +  L ++  + 
Sbjct: 337 AAIGELDNLRELCLRNNKLKILPSEIGELGDLQYLDLKNNKLETLP-AAIGELKNLRELN 395

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           LS NK    P        S+  +N   N I ++  G
Sbjct: 396 LSGNKLETLPIEIEKLSGSMQLLNLRGNNISEVGDG 431


>gi|427795749|gb|JAA63326.1| Putative leucine rich repeat protein, partial [Rhipicephalus
           pulchellus]
          Length = 463

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 210/398 (52%), Gaps = 29/398 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +++RVLD  H+ L ++P  V+    +L+ LYL  N+IK +   + +   L  L++ DN I
Sbjct: 11  EEVRVLDYAHHGLEDVPSEVFNYERTLEELYLNANQIKDLPRPLFHCHGLRKLNLSDNDI 70

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LPP L  L +L  LD++ N++ E+P  I  C  L  ++   N +  +P+    L+N+ 
Sbjct: 71  QTLPPALSSLISLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEGFTQLLNIE 130

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
           +L L+   LE +P    +   L    +    L  LP  + + LT ++ + + +N FT  P
Sbjct: 131 QLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSM-ARLTELSRLDIGQNDFTELP 189

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                     +     +L+++    N LTSLP  +G  + LT L
Sbjct: 190 E-------------------------VIGSLPSLTELWCDSNRLTSLPSYMGHLIKLTYL 224

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           +   N+IS ++++I+N+  L  L L+ N L+K+P ++G L+ L  L L++N L +LP+ I
Sbjct: 225 DASRNRISFIADEIENMTMLSDLTLTTNKLQKIPETLGFLQNLTTLRLDDNHLATLPDSI 284

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G L +L+ LI+ SN++ SLP  IG L NL+ L   +N L+ +P EIG+   L  L L DN
Sbjct: 285 GQLSKLEELIINSNEIDSLPSTIGLLRNLTLLMADDNLLEDLPPEIGSCSKLRVLSLRDN 344

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV-VGG 565
             L N+P EL   S+L++++L    L  +P  +  +GG
Sbjct: 345 R-LCNVPDELGHLSSLRVVNLSGNQLRHLPVSLAKLGG 381



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 211/434 (48%), Gaps = 50/434 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR   E +  LD +   +  +P  V      LEELYL  N++  LP  + +   L  L L
Sbjct: 6   LRPAREEVRVLDYAHHGLEDVPSEVFNYERTLEELYLNANQIKDLPRPLFHCHGLRKLNL 65

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           ++N + +LP +L++L  L  LD+  N + E+P  +     L I+    N +  +      
Sbjct: 66  SDNDIQTLPPALSSLISLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEGFTQ 125

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L N+  L + D  +  LP   G L  L  L+L  NHL+ LPK +   T L  LD+  N+ 
Sbjct: 126 LLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELSRLDIGQNDF 185

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+++G+L +LT L    NRL S+P  +   + L   +     +S + D  + ++T +
Sbjct: 186 TELPEVIGSLPSLTELWCDSNRLTSLPSYMGHLIKLTYLDASRNRISFIADE-IENMTML 244

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
           +++TL+ NK    P           ++ F                +NL+ + + DN L +
Sbjct: 245 SDLTLTTNKLQKIPE----------TLGF---------------LQNLTTLRLDDNHLAT 279

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G             Q+SKL E          L++++N +  LPS+IG LR L  L
Sbjct: 280 LPDSIG-------------QLSKLEE----------LIINSNEIDSLPSTIGLLRNLTLL 316

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             ++N LE LP EIG   +L+ L L+ N+L ++P  +GHL++L  +++  N L+ +P  +
Sbjct: 317 MADDNLLEDLPPEIGSCSKLRVLSLRDNRLCNVPDELGHLSSLRVVNLSGNQLRHLPVSL 376

Query: 515 GTLENLHTLYLNDN 528
             L  LH L+L+ N
Sbjct: 377 AKLGGLHALWLSQN 390



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 171/359 (47%), Gaps = 26/359 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS + I  LPP++  L  LEEL +  N +  +P  I     L+ +  + N +  LP+ 
Sbjct: 63  LNLSDNDIQTLPPALSSLISLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEG 122

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
              L  +  L L    L  LP    +L+ LKIL LR N +K +   +  L+ LS L +  
Sbjct: 123 FTQLLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELSRLDIGQ 182

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N   ELP  +G L +L  L    N L  LP  +G+   L  LD   N +  I D + N+ 
Sbjct: 183 NDFTELPEVIGSLPSLTELWCDSNRLTSLPSYMGHLIKLTYLDASRNRISFIADEIENMT 242

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L+ L L+ N+L+ +PETL    +L    ++   L++LPD +                  
Sbjct: 243 MLSDLTLTTNKLQKIPETLGFLQNLTTLRLDDNHLATLPDSI------------------ 284

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                   Q + +  +    N+ID +P  I    +NL+ +   DNLL  LP ++G+   L
Sbjct: 285 -------GQLSKLEELIINSNEIDSLPSTI-GLLRNLTLLMADDNLLEDLPPEIGSCSKL 336

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
             L+L  N++  + +++ +L +L V+ LS N L+ LP S+  L  L  L L +N+ + L
Sbjct: 337 RVLSLRDNRLCNVPDELGHLSSLRVVNLSGNQLRHLPVSLAKLGGLHALWLSQNQTKPL 395



 Score = 45.4 bits (106), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LPP +   + L  L L  N+L ++P ++G++++L  + L+ N L  LP SLA L  L  L
Sbjct: 326 LPPEIGSCSKLRVLSLRDNRLCNVPDELGHLSSLRVVNLSGNQLRHLPVSLAKLGGLHAL 385

Query: 176 DLRHNKLNELPMV---VYKLTSLKIL--YLRFNRIKTVHPD 211
            L  N+   L ++   V + T  ++L  +L        HPD
Sbjct: 386 WLSQNQTKPLVLLQSDVDRETGQRVLTCFLLPQESSAAHPD 426


>gi|124002734|ref|ZP_01687586.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991962|gb|EAY31349.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 500

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 235/453 (51%), Gaps = 6/453 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +D+++   ++L  +++  + ++ L L   KL  +P  I  + NL  L L  N LT  P  
Sbjct: 16  MDINRLFYSNLDQALQNKSKVQRLNLSSQKLKKIPQNIVLLKNLEELNLGNNQLTVFPKV 75

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L  L++L++L L +N +  LP  +  L SL++L ++ N +  +   I  L NL+ L++ +
Sbjct: 76  LFQLKKLKILRLYNNNIKHLPQGIDSLKSLEVLDIQRNSLVDLPGKIVRLRNLTQLNIAN 135

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK++ELP  +G+LK +   +   N L++LP    +   L +L L  N+L ++   LG   
Sbjct: 136 NKVKELPENIGKLKKMRVFEAYGNQLKQLPASFSSLRKLESLGLGKNQLESVS--LGKYK 193

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L +S NRL  +P+ L     L    ++   L+ LP+  + +L+ +  + L+ NK  
Sbjct: 194 NLQSLDISRNRLTKIPDNLGSLKKLTSLFLQQNNLTKLPEK-IGALSQLRRLYLNENKIK 252

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P    T    +  +  EHNQ+ ++P  I  +   L  +++  NLL +LP  +G    L
Sbjct: 253 QLPK-ELTSLVQLQVVKLEHNQLLELPNDI-GKLSQLKVLSLHHNLLRALPESIGNLTLL 310

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L L  N++  L   + N+ +L+ + +  N L+ LP SI  L+K++ +   +N++  LP
Sbjct: 311 PTLQLSNNRLELLPSSLGNMASLKSIWVRKNNLQTLPKSISQLKKIERIYASQNQISLLP 370

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            E+  L +L+ L +  N L  +P  +  L  L YL    N + S+P +I  L +L  L L
Sbjct: 371 VELAELTQLKSLAISGNLLTEIPSELWGLEELYYLDASRNQITSLPNKISDLRSLRILVL 430

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           + N  L  +PF +    NL+ + LDN  L+++P
Sbjct: 431 SHNR-LRTLPFGITRLKNLRELYLDNNQLAKLP 462



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 216/420 (51%), Gaps = 5/420 (1%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           +T  P  + +L  L+ L LY N +  LP  I  + +L  L +  NSL  LP  +  L+ L
Sbjct: 69  LTVFPKVLFQLKKLKILRLYNNNIKHLPQGIDSLKSLEVLDIQRNSLVDLPGKIVRLRNL 128

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
             L++ +NK+ ELP  + KL  +++     N++K +      L  L  L +  N++  + 
Sbjct: 129 TQLNIANNKVKELPENIGKLKKMRVFEAYGNQLKQLPASFSSLRKLESLGLGKNQLESV- 187

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             LG+ KNL +LD++ N L ++P  +G+   L +L LQ N L  +P+ +G L  L RL L
Sbjct: 188 -SLGKYKNLQSLDISRNRLTKIPDNLGSLKKLTSLFLQQNNLTKLPEKIGALSQLRRLYL 246

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           + N+++ +P+ L+  V L    +E   L  LP+ +   L+ +  ++L  N   A P    
Sbjct: 247 NENKIKQLPKELTSLVQLQVVKLEHNQLLELPNDI-GKLSQLKVLSLHHNLLRALPES-I 304

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
              T + ++   +N+++ +P  + + A +L  + ++ N L +LP  +     +  +    
Sbjct: 305 GNLTLLPTLQLSNNRLELLPSSLGNMA-SLKSIWVRKNNLQTLPKSISQLKKIERIYASQ 363

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           NQIS L  ++  L  L+ L +S NLL ++PS +  L +L  LD   N++ SLPN+I  L+
Sbjct: 364 NQISLLPVELAELTQLKSLAISGNLLTEIPSELWGLEELYYLDASRNQITSLPNKISDLR 423

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            L+ L+L  N+L +LP  I  L NL  L +  N L  +P  +G L NL    +  N   N
Sbjct: 424 SLRILVLSHNRLRTLPFGITRLKNLRELYLDNNQLAKLPPNMGALLNLKIFTMKRNGFTN 483



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 195/337 (57%), Gaps = 6/337 (1%)

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           +N++   P  L +LK L  L L +N+++ LP+ I +   L  LD+Q N LV++P  +  L
Sbjct: 66  NNQLTVFPKVLFQLKKLKILRLYNNNIKHLPQGIDSLKSLEVLDIQRNSLVDLPGKIVRL 125

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
            NLT+L ++ N+++ +PE + K   +  F   G  L  LP    SSL  + ++ L +N+ 
Sbjct: 126 RNLTQLNIANNKVKELPENIGKLKKMRVFEAYGNQLKQLPASF-SSLRKLESLGLGKNQL 184

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
            +   G   ++ ++ S++   N++ KIP  + S  K L+ + ++ N LT LP  +G    
Sbjct: 185 ESVSLG---KYKNLQSLDISRNRLTKIPDNLGS-LKKLTSLFLQQNNLTKLPEKIGALSQ 240

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L  L L  N+I +L +++ +LV L+V+ L +N L +LP+ IG L +LK L L  N L +L
Sbjct: 241 LRRLYLNENKIKQLPKELTSLVQLQVVKLEHNQLLELPNDIGKLSQLKVLSLHHNLLRAL 300

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P  IG L  L  L L +N+L  LP ++G++ +L  + V +NNLQ++P+ I  L+ +  +Y
Sbjct: 301 PESIGNLTLLPTLQLSNNRLELLPSSLGNMASLKSIWVRKNNLQTLPKSISQLKKIERIY 360

Query: 525 LNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            + N  ++ +P ELA  + L+ +++    L++IPSE+
Sbjct: 361 ASQNQ-ISLLPVELAELTQLKSLAISGNLLTEIPSEL 396



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 198/404 (49%), Gaps = 31/404 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
            N+  L+++ + +  LP ++ KL  +     YGN+L  LP+    +  L  LGL +N L 
Sbjct: 126 RNLTQLNIANNKVKELPENIGKLKKMRVFEAYGNQLKQLPASFSSLRKLESLGLGKNQLE 185

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           S+  SL   + L+ LD+  N+L ++P  +  L  L  L+L+ N +  +   I  LS L  
Sbjct: 186 SV--SLGKYKNLQSLDISRNRLTKIPDNLGSLKKLTSLFLQQNNLTKLPEKIGALSQLRR 243

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +NKI++LP EL  L  L  + L HN L ELP +IG  + L  L L HN L  +P+ 
Sbjct: 244 LYLNENKIKQLPKELTSLVQLQVVKLEHNQLLELPNDIGKLSQLKVLSLHHNLLRALPES 303

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +GNL  L  L+LS NRLE +P +L     L    V    L +LP  +             
Sbjct: 304 IGNLTLLPTLQLSNNRLELLPSSLGNMASLKSIWVRKNNLQTLPKSI------------- 350

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
                       +Q   +  I    NQI  +P  + +    L  + +  NLLT +P +L 
Sbjct: 351 ------------SQLKKIERIYASQNQISLLPVEL-AELTQLKSLAISGNLLTEIPSELW 397

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+   NQI+ L   I +L +L +LVLS+N L+ LP  I  L+ L+ L L+ N+
Sbjct: 398 GLEELYYLDASRNQITSLPNKISDLRSLRILVLSHNRLRTLPFGITRLKNLRELYLDNNQ 457

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL-TNLSYLSVG 503
           L  LP  +G L  L+   ++ N   +  +A  H+   LS++ +G
Sbjct: 458 LAKLPPNMGALLNLKIFTMKRNGFTNEQKA--HIRKQLSHVRIG 499



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 161/315 (51%), Gaps = 26/315 (8%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+ +LD+S++ +T +P ++  L  L  L+L  N L  LP +IG ++ L  L L EN 
Sbjct: 191 KYKNLQSLDISRNRLTKIPDNLGSLKKLTSLFLQQNNLTKLPEKIGALSQLRRLYLNENK 250

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           +  LP  L +L QL+V+ L HN+L ELP                        DI  LS L
Sbjct: 251 IKQLPKELTSLVQLQVVKLEHNQLLELP-----------------------NDIGKLSQL 287

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            +LS+  N +R LP  +G L  L TL L++N LE LP  +GN   L ++ ++ N L  +P
Sbjct: 288 KVLSLHHNLLRALPESIGNLTLLPTLQLSNNRLELLPSSLGNMASLKSIWVRKNNLQTLP 347

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +  L  + R+  S N++  +P  L++   L    + G  L+ +P  L   L  +  + 
Sbjct: 348 KSISQLKKIERIYASQNQISLLPVELAELTQLKSLAISGNLLTEIPSELW-GLEELYYLD 406

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
            SRN+ T+ P+   +   S+  +   HN++  +P+GI +R KNL ++ + +N L  LP +
Sbjct: 407 ASRNQITSLPN-KISDLRSLRILVLSHNRLRTLPFGI-TRLKNLRELYLDNNQLAKLPPN 464

Query: 399 LGTWVGLTELNLGTN 413
           +G  + L    +  N
Sbjct: 465 MGALLNLKIFTMKRN 479


>gi|260812958|ref|XP_002601187.1| hypothetical protein BRAFLDRAFT_75632 [Branchiostoma floridae]
 gi|229286478|gb|EEN57199.1| hypothetical protein BRAFLDRAFT_75632 [Branchiostoma floridae]
          Length = 1577

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 142/433 (32%), Positives = 215/433 (49%), Gaps = 30/433 (6%)

Query: 143 IGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           +G +T LT L L   +L  LPD L  L+ L  LDL  N   EL   + KLT+LK+L L  
Sbjct: 20  MGKMTLLT-LELRYKNLKQLPDELFELKDLEALDLSRNMNMELSNGLIKLTNLKLLSLAG 78

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
             + TV   +  L  L  L + +N+   LP ++  L NL  + L   +L+ LP  +   +
Sbjct: 79  CNLATVPAAVMKLPQLETLILSNNENITLPDDMSGLVNLTAIHLDWCNLDSLPPVVLKLS 138

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L +LDL  NE +++PD L  L N+  LRL    + +VP  + K   L + N+ G     
Sbjct: 139 HLRSLDLSGNEQISLPDELCRLENIKELRLYACFMATVPPAVLKLTQLEKLNLSGNWGIH 198

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LPDGL S LT+I  + L        PS                         +  R   L
Sbjct: 199 LPDGL-SRLTNIRVLILLGTGMDTVPS-------------------------VAWRLTQL 232

Query: 383 SKVNMKDNLL--TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
            ++ +  N L  ++LP  +G    +  L+L   Q+  L  ++  L  LE L LS+N L+ 
Sbjct: 233 ERLYLSLNPLQTSTLPAKVGHLTNIKHLHLSHCQLHTLPPEVGRLTQLEWLDLSSNPLQT 292

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           LP+ +G L K+K LDL   +L +LP E+G L +L+RL L++N + +LP  +G LTN+ +L
Sbjct: 293 LPAEVGQLTKVKHLDLSYCQLHTLPPEVGRLTQLERLDLRNNPIQTLPVEVGQLTNIKHL 352

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
            +    L ++P E+G L  L  L L+ N  L  +P E+   +N+  + +   PL + PSE
Sbjct: 353 KLSHCQLHTLPPEVGRLTQLEWLDLSSNP-LQTLPAEVGQLTNVSYLHVSGNPLIKPPSE 411

Query: 561 IVVGGPSLIIRYL 573
           +   G S I RY 
Sbjct: 412 VCRQGISAIRRYF 424



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 201/423 (47%), Gaps = 26/423 (6%)

Query: 93  KEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCL 152
           KE+    +  +L L+L   ++  LP  + +L  LE L L  N    L + +  +TNL  L
Sbjct: 15  KEWDIMGKMTLLTLELRYKNLKQLPDELFELKDLEALDLSRNMNMELSNGLIKLTNLKLL 74

Query: 153 GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
            LA  +L ++P ++  L QL  L L +N+   LP  +  L +L  ++L +  + ++ P +
Sbjct: 75  SLAGCNLATVPAAVMKLPQLETLILSNNENITLPDDMSGLVNLTAIHLDWCNLDSLPPVV 134

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             LS+L  L +  N+   LP EL  L+N+  L L    +  +P  +   T L  L+L  N
Sbjct: 135 LKLSHLRSLDLSGNEQISLPDELCRLENIKELRLYACFMATVPPAVLKLTQLEKLNLSGN 194

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
             +++PD L  L N+  L L    +++VP    +                        LT
Sbjct: 195 WGIHLPDGLSRLTNIRVLILLGTGMDTVPSVAWR------------------------LT 230

Query: 333 SINNITLSRNKF-TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
            +  + LS N   T+         T++  ++  H Q+  +P  +  R   L  +++  N 
Sbjct: 231 QLERLYLSLNPLQTSTLPAKVGHLTNIKHLHLSHCQLHTLPPEV-GRLTQLEWLDLSSNP 289

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           L +LP ++G    +  L+L   Q+  L  ++  L  LE L L NN ++ LP  +G L  +
Sbjct: 290 LQTLPAEVGQLTKVKHLDLSYCQLHTLPPEVGRLTQLERLDLRNNPIQTLPVEVGQLTNI 349

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           K L L   +L +LP E+G L +L+ L L SN L +LP  +G LTN+SYL V  N L   P
Sbjct: 350 KHLKLSHCQLHTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTNVSYLHVSGNPLIKPP 409

Query: 512 EEI 514
            E+
Sbjct: 410 SEV 412



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 117/207 (56%), Gaps = 2/207 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKL--ASLPSQIGYVTNLTCLGLAENSL 159
           NI  L L  + +  +P    +LT LE LYL  N L  ++LP+++G++TN+  L L+   L
Sbjct: 208 NIRVLILLGTGMDTVPSVAWRLTQLERLYLSLNPLQTSTLPAKVGHLTNIKHLHLSHCQL 267

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
            +LP  +  L QL  LDL  N L  LP  V +LT +K L L + ++ T+ P++  L+ L 
Sbjct: 268 HTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTKVKHLDLSYCQLHTLPPEVGRLTQLE 327

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L +R+N I+ LP E+G+L N+  L L+H  L  LP E+G  T L  LDL  N L  +P 
Sbjct: 328 RLDLRNNPIQTLPVEVGQLTNIKHLKLSHCQLHTLPPEVGRLTQLEWLDLSSNPLQTLPA 387

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSK 306
            +G L N++ L +S N L   P  + +
Sbjct: 388 EVGQLTNVSYLHVSGNPLIKPPSEVCR 414



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 24/174 (13%)

Query: 412 TNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN------------ 459
           T+++     DI   + L  L L    LK+LP  +  L+ L+ LDL  N            
Sbjct: 9   TDKVKPKEWDIMGKMTLLTLELRYKNLKQLPDELFELKDLEALDLSRNMNMELSNGLIKL 68

Query: 460 -----------KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
                       L ++P  +  L +L+ LIL +N+ ++LP  +  L NL+ + +   NL 
Sbjct: 69  TNLKLLSLAGCNLATVPAAVMKLPQLETLILSNNENITLPDDMSGLVNLTAIHLDWCNLD 128

Query: 509 SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           S+P  +  L +L +L L+ N  + ++P EL    N++ + L  C ++ +P  ++
Sbjct: 129 SLPPVVLKLSHLRSLDLSGNEQI-SLPDELCRLENIKELRLYACFMATVPPAVL 181


>gi|395818930|ref|XP_003782862.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Otolemur garnettii]
          Length = 901

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 243/509 (47%), Gaps = 53/509 (10%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L++S + I H+P  + +L ++ +L+   N + +LPS +  + NL  L L +N L  
Sbjct: 219 NLRILNVSHNQIPHIPVEISQLGNIRQLFFDNNYIENLPSDLANLRNLEILNLGKNKLKL 278

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV------------- 208
           +PD+L +L+ L VL+L +N+L   P  +  L  L  L L  N IK++             
Sbjct: 279 IPDTLPSLKNLNVLNLEYNQLTIFPKALCFLPKLMSLNLTGNLIKSLPKEIKELKNLEKL 338

Query: 209 ---HPDIQYLS-------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
              H  + +L+        +  L + DNK+  +  ++   + L  L L  N L+ +P++I
Sbjct: 339 LLDHNKLTFLAVQIFQLLKIKELQLADNKLEVISHKIENFRELRILMLDKNLLKNIPEKI 398

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
             C ML  L L  N+L  +P  +  L NL +L ++ N +  + E +    +++     G 
Sbjct: 399 SYCVMLECLSLSDNKLTELPKNIHKLKNLRKLHVNRNHMVGITEDILHLHNISSLEFSGN 458

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
            ++ +P   + +   I  I L+ N+   +P G      S+Y ++F  N I +IP  I S 
Sbjct: 459 IITDIPIE-IKNCQKITKIELNYNEIRYFPVGL-CALDSLYYLSFNGNYISEIPADI-SF 515

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
            K L  +   +N          + + L  L+LG NQISK+   I N+++L VL+L  N  
Sbjct: 516 NKQLLHLEFNENKFLIFSEYFCSLINLRYLDLGKNQISKIPPSISNMISLHVLILCYNKF 575

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ--------------- 483
           +  P  +  L  L+ LDL EN L  +P+EI  LK +Q+L   SNQ               
Sbjct: 576 EIFPRELCTLENLRVLDLSENHLRKIPSEICNLKGIQKLNFASNQFTYFPIELCQLQSLE 635

Query: 484 -----------LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
                      L SLP  + ++T L  L V  N ++ IP  IG L NL +LY ++N  ++
Sbjct: 636 ELNLSQINGRKLTSLPEELSNMTQLKELDVSNNEIREIPRNIGELRNLVSLYAHNNH-IS 694

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            +P      ++LQ ++L    L+ +PS I
Sbjct: 695 YLPPSFLSLNHLQQLNLSGNNLTALPSGI 723



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 183/381 (48%), Gaps = 28/381 (7%)

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVH-PDIQYLSNLSMLSMRDNKIRELPPELGELKN 240
           L E P  + K+   K LYL  N+IKT    D   L  L +LS+++N++  LP E+  L N
Sbjct: 160 LQEFPKDILKIKYTKYLYLDKNQIKTFDGTDSGDLLGLEILSLQENELLSLPSEIHLLHN 219

Query: 241 LVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESV 300
           L  L+++HN +  +P EI     +  L   +N + N+P  L NL NL  L L  N+L+ +
Sbjct: 220 LRILNVSHNQIPHIPVEISQLGNIRQLFFDNNYIENLPSDLANLRNLEILNLGKNKLKLI 279

Query: 301 PETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYS 360
           P+TL    +LN  N+E   L+  P  L                              + S
Sbjct: 280 PDTLPSLKNLNVLNLEYNQLTIFPKALCF-------------------------LPKLMS 314

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
           +N   N I  +P  I    KNL K+ +  N LT L + +   + + EL L  N++  +S 
Sbjct: 315 LNLTGNLIKSLPKEI-KELKNLEKLLLDHNKLTFLAVQIFQLLKIKELQLADNKLEVISH 373

Query: 421 DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQ 480
            I+N   L +L+L  NLLK +P  I     L+CL L +NKL  LP  I  LK L++L + 
Sbjct: 374 KIENFRELRILMLDKNLLKNIPEKISYCVMLECLSLSDNKLTELPKNIHKLKNLRKLHVN 433

Query: 481 SNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELAL 540
            N +V +   I HL N+S L    N +  IP EI   + +  + LN N  +   P  L  
Sbjct: 434 RNHMVGITEDILHLHNISSLEFSGNIITDIPIEIKNCQKITKIELNYNE-IRYFPVGLCA 492

Query: 541 CSNLQIMSLDNCPLSQIPSEI 561
             +L  +S +   +S+IP++I
Sbjct: 493 LDSLYYLSFNGNYISEIPADI 513



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 3/150 (2%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLY---GNKLASLPSQIGYVTNLTCLGL 154
           C  + I  L+ + +  T+ P  + +L  LEEL L    G KL SLP ++  +T L  L +
Sbjct: 606 CNLKGIQKLNFASNQFTYFPIELCQLQSLEELNLSQINGRKLTSLPEELSNMTQLKELDV 665

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           + N +  +P ++  L+ L  L   +N ++ LP     L  L+ L L  N +  +   I  
Sbjct: 666 SNNEIREIPRNIGELRNLVSLYAHNNHISYLPPSFLSLNHLQQLNLSGNNLTALPSGIHK 725

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTL 244
           LS+L  +   DN +   P E+ + K L T+
Sbjct: 726 LSSLKEIHFDDNPLLRPPMEICKGKQLYTI 755


>gi|421092130|ref|ZP_15552886.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
 gi|409999073|gb|EKO49773.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
          Length = 364

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 121/334 (36%), Positives = 181/334 (54%), Gaps = 26/334 (7%)

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           +++L L  NR KT+  +I  L NL  L++  N++  LP E+G+LKNL  L+L  N    L
Sbjct: 48  VRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTIL 107

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           PKE+     L  L L  N L  +P+ +G L NL  L+L++N+ +++P+ + +  +L   N
Sbjct: 108 PKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLN 167

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +    L++LP+ +   L ++ ++ L  N+ T  P+              E  Q+ K    
Sbjct: 168 LGNNQLTALPNEI-GQLQNLKSLDLGSNRLTTLPN--------------EIGQLQK---- 208

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
                  L  + +  N LT+LP ++G    L EL LG+NQ++ L  +I  L NL+ L L 
Sbjct: 209 -------LQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLR 261

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
           +N L  L   I  L+ LK LDL  N+L + P EI  LK LQ L L SNQL +LP+ IG L
Sbjct: 262 SNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQL 321

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            NL    +  N L ++P+EIG L+NL  LYL DN
Sbjct: 322 KNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDN 355



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/335 (34%), Positives = 176/335 (52%), Gaps = 26/335 (7%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L  N+  +LP +IG + NL  L L +N LT LP  +  L+ LR L+L  N+   LP  
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKE 110

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           V KL +LK L L  NR+ T+  +I  L NL +L +  N+ + +P E+G+LKNL TL+L +
Sbjct: 111 VEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGN 170

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L  LP EIG    L +LDL  N L  +P+ +G L  L  L LS NRL ++P  + +  
Sbjct: 171 NQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQ 230

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L E  +    L+ LP+  +  L ++  + L  N+ T                       
Sbjct: 231 NLQELYLGSNQLTILPNE-IGQLKNLQTLYLRSNRLTTLSKD------------------ 271

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
                    + +NL  +++ +N LT+ P ++     L  L+LG+NQ++ L ++I  L NL
Sbjct: 272 -------IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNL 324

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           +V  L+NN L  LP  IG L+ L+ L L +N+L S
Sbjct: 325 QVFELNNNQLTTLPKEIGQLQNLQELYLIDNQLSS 359



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/318 (35%), Positives = 168/318 (52%), Gaps = 27/318 (8%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L+L+ N  + LPKEIG    L  L+L  N+L  +P  +G L NL +L L  N+   +P+ 
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKE 110

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           + K  +L E ++    L++LP+ +                          Q  ++  +  
Sbjct: 111 VEKLENLKELSLGSNRLTTLPNEI-------------------------GQLKNLRVLKL 145

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
            HNQ   IP  I  + KNL  +N+ +N LT+LP ++G    L  L+LG+N+++ L  +I 
Sbjct: 146 THNQFKTIPKEI-GQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIG 204

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
            L  L+ L LS N L  LP+ IG L+ L+ L L  N+L  LPNEIG LK LQ L L+SN+
Sbjct: 205 QLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNR 264

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
           L +L + I  L NL  L +  N L + P+EI  L+NL  L L  N  L  +P E+    N
Sbjct: 265 LTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQ-LTTLPKEIGQLKN 323

Query: 544 LQIMSLDNCPLSQIPSEI 561
           LQ+  L+N  L+ +P EI
Sbjct: 324 LQVFELNNNQLTTLPKEI 341



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/311 (34%), Positives = 168/311 (54%), Gaps = 3/311 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS +    LP  + KL +L+EL L  N+L  LP +IG + NL  L L +N  T LP  
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L  N+L  LP  + +L +L++L L  N+ KT+  +I  L NL  L++ +
Sbjct: 111 VEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGN 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L+NL +LDL  N L  LP EIG    L  L L  N L  +P+ +G L 
Sbjct: 171 NQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQ 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L  +P  + +  +L    +    L++L    +  L ++ ++ L  N+ T
Sbjct: 231 NLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKD-IEQLQNLKSLDLWNNQLT 289

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P     Q  ++  ++   NQ+  +P  I  + KNL    + +N LT+LP ++G    L
Sbjct: 290 TFPK-EIEQLKNLQVLDLGSNQLTTLPKEI-GQLKNLQVFELNNNQLTTLPKEIGQLQNL 347

Query: 406 TELNLGTNQIS 416
            EL L  NQ+S
Sbjct: 348 QELYLIDNQLS 358



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 127/226 (56%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  L L  + +T LP  + +L +L  L L  N+  ++P +IG + NL  L L  N 
Sbjct: 113 KLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQ 172

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP+ +  LQ L+ LDL  N+L  LP  + +L  L+ LYL  NR+ T+  +I  L NL
Sbjct: 173 LTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNL 232

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L +  N++  LP E+G+LKNL TL L  N L  L K+I     L +LDL +N+L   P
Sbjct: 233 QELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFP 292

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
             +  L NL  L L  N+L ++P+ + +  +L  F +    L++LP
Sbjct: 293 KEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLP 338



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 92/153 (60%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +L LS + +T LP  + +L +L+ELYL  N+L  LP++IG + NL  L L  N LT+L  
Sbjct: 211 DLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSK 270

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            +  LQ L+ LDL +N+L   P  + +L +L++L L  N++ T+  +I  L NL +  + 
Sbjct: 271 DIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELN 330

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           +N++  LP E+G+L+NL  L L  N L    KE
Sbjct: 331 NNQLTTLPKEIGQLQNLQELYLIDNQLSSEEKE 363



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  +I N   ++ L+L  N+ ++LP EIG LK LQ L L  NQL  LP+ IG L NL 
Sbjct: 36  RDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 95

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L++ +N    +P+E+  LENL  L L  N  L  +P E+    NL+++ L +     IP
Sbjct: 96  KLNLHDNQFTILPKEVEKLENLKELSLGSNR-LTTLPNEIGQLKNLRVLKLTHNQFKTIP 154

Query: 559 SEI 561
            EI
Sbjct: 155 KEI 157


>gi|260812956|ref|XP_002601186.1| hypothetical protein BRAFLDRAFT_75631 [Branchiostoma floridae]
 gi|229286477|gb|EEN57198.1| hypothetical protein BRAFLDRAFT_75631 [Branchiostoma floridae]
          Length = 1375

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 231/477 (48%), Gaps = 27/477 (5%)

Query: 112 SITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQ 171
           +I   PP + +   LEE  +           +G VT L+ L L++ +L+ LPD L  L +
Sbjct: 13  TIMATPPRLRQNMKLEEWNI-----------MGKVTTLSTLDLSDQNLSQLPDDLFELNE 61

Query: 172 LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
           L+ L L  NK  +L   + +LT+LK+L L    +  V   +  LS L  L++ +N    L
Sbjct: 62  LQALRLDRNKNIQLSEKLIRLTNLKLLSLDDCNLDIVPAAVMKLSQLETLNLSNNMNITL 121

Query: 232 PPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLR 291
             ++  L NL TL L +  L+ +P  + N + L  LDL  N+ +++PD L  L N+  LR
Sbjct: 122 SDKMSSLVNLSTLSLYNCELDSVPPLVLNLSHLHCLDLSGNKQISLPDELCRLENVKVLR 181

Query: 292 LSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL--------------LSSLTSINNI 337
           L    + +VP  + K   L E ++   +   LPD L              +  L  +  +
Sbjct: 182 LRKCSMATVPPAVLKLTQLEELDLSWNSGIHLPDELELLTNIRLHTLPPEVGRLAQLERL 241

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            LS N           Q T+V  ++  H Q+  +P  +  R   L  +N+  N L +LP 
Sbjct: 242 DLSYNNPPQTLLAEVGQLTNVKHLDLSHCQLRTLPPEV-GRLTQLKWLNLSSNPLQTLPT 300

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++G    +  L+L   ++  L  ++  L  LE L LS N L+ L   +G L  +K LDL 
Sbjct: 301 EVGQLTNVKHLDLSECKLCTLPPEVGRLTQLEWLDLSVNPLQTLSGEVGQLTIVKHLDLS 360

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
             +L +LP E+G L  L+ L L  N+L +LP  +G LTN  +  +    L ++P E+G L
Sbjct: 361 HCRLRTLPPEVGRLTRLEWLDLSVNRLQTLPAEVGQLTNAKHFYLSHCRLHTLPPEVGRL 420

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
             L  L LN N  L  +P E+   +NL  +++D  P+ + P+E+   G + I +Y +
Sbjct: 421 TQLEWLILNANP-LQMLPAEVRQLTNLHNLNVDKTPIIKPPAEVCSQGINAIRQYFE 476



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 105/189 (55%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +LDLS   +  LPP V +LT L+ L L  N L +LP+++G +TN+  L L+E  L +
Sbjct: 261 NVKHLDLSHCQLRTLPPEVGRLTQLKWLNLSSNPLQTLPTEVGQLTNVKHLDLSECKLCT 320

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L QL  LDL  N L  L   V +LT +K L L   R++T+ P++  L+ L  L
Sbjct: 321 LPPEVGRLTQLEWLDLSVNPLQTLSGEVGQLTIVKHLDLSHCRLRTLPPEVGRLTRLEWL 380

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N+++ LP E+G+L N     L+H  L  LP E+G  T L  L L  N L  +P  +
Sbjct: 381 DLSVNRLQTLPAEVGQLTNAKHFYLSHCRLHTLPPEVGRLTQLEWLILNANPLQMLPAEV 440

Query: 282 GNLINLTRL 290
             L NL  L
Sbjct: 441 RQLTNLHNL 449


>gi|26325922|dbj|BAC26715.1| unnamed protein product [Mus musculus]
          Length = 853

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 249/522 (47%), Gaps = 53/522 (10%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           I KE L+   EN+  L L+ + I  LP  +E L +LE L L  N L  +P  +  + NL 
Sbjct: 220 IPKELLQL--ENMRQLLLNSNHIDTLPSGLEHLRYLETLSLGKNMLTYIPDSLSSLKNLR 277

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L  N LT    SL  L +L  L+L  N +  LP  V +L +L+ L +  N++  +  
Sbjct: 278 ILNLEYNQLTIFSKSLCFLPKLNSLNLTGNMIGSLPKEVRELKNLESLLMDHNKLTFLAV 337

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           +I  L  +  L + DNK+  + P++   K L  L+L  N L+ +PK+I +C  L +L L 
Sbjct: 338 EIFQLPKIKELHLADNKLEAISPKIENFKELRLLNLDKNLLQSIPKKISHCVNLESLSLS 397

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
            N +  +P  +  L NL +L ++ N++ ++ E +S   +++     G  ++ +P   + +
Sbjct: 398 DNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEISHLSNIHILEFSGNQITHVPIE-IKN 456

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
              I  + L+ N    +P  G     S+  ++F  N I +IP  + S +K L  + +  N
Sbjct: 457 CRKITRVELNYNNIMYFPV-GLCALQSLDYLSFNGNYISEIPVDM-SFSKQLLHLELNRN 514

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            LT     L +   L  L+L  NQI  +   I  +V+L VL+LS+N  +  P  + +L+ 
Sbjct: 515 KLTVFSKHLCSLTNLEYLDLAKNQIMTIPSCISAMVSLHVLILSDNKFESFPKELCSLKN 574

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSN--------------------------QL 484
           L+ LD+ ENKL+ +P EI  LK +Q+L L +N                          ++
Sbjct: 575 LRVLDISENKLQKIPLEISKLKRIQKLHLSNNIFTNFPVELCQRQTLEELNISQTSGKKV 634

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC-------------- 530
             LP  + H+T L  L++  N ++ IP+ IG L +L + Y ++N                
Sbjct: 635 TRLPEEVSHMTQLKILNISNNAIKDIPKNIGELRSLVSFYASNNQISSLPSSFLSLEVLQ 694

Query: 531 --------LNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVG 564
                   +  +P  +   S+L+ ++ D+ PL + P EI  G
Sbjct: 695 SLDLRGNNMTALPSGIYKLSSLKEINFDDNPLMRPPMEICKG 736



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 230/459 (50%), Gaps = 7/459 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L ++ ++ +P  ++   +L+ L    N+++ +P ++  + N+  L L  N + +LP  
Sbjct: 187 LSLQENGLSSIPLEIQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTLPSG 246

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L +L+ L  L L  N L  +P  +  L +L+IL L +N++      + +L  L+ L++  
Sbjct: 247 LEHLRYLETLSLGKNMLTYIPDSLSSLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNLTG 306

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N I  LP E+ ELKNL +L + HN L  L  EI     +  L L  N+L  I   + N  
Sbjct: 307 NMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAISPKIENFK 366

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L  N L+S+P+ +S CV+L   ++    +  LP   +  L ++  + ++RNK  
Sbjct: 367 ELRLLNLDKNLLQSIPKKISHCVNLESLSLSDNNIEELPKK-IRKLKNLRQLHVNRNKMI 425

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
              +   +  ++++ + F  NQI  +P  I    + +++V +  N +   P+ L     L
Sbjct: 426 TM-TEEISHLSNIHILEFSGNQITHVPIEI-KNCRKITRVELNYNNIMYFPVGLCALQSL 483

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L+   N IS++  D+     L  L L+ N L      + +L  L+ LDL +N++ ++P
Sbjct: 484 DYLSFNGNYISEIPVDMSFSKQLLHLELNRNKLTVFSKHLCSLTNLEYLDLAKNQIMTIP 543

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
           + I  +  L  LIL  N+  S P+ +  L NL  L + EN LQ IP EI  L+ +  L+L
Sbjct: 544 SCISAMVSLHVLILSDNKFESFPKELCSLKNLRVLDISENKLQKIPLEISKLKRIQKLHL 603

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCP---LSQIPSEI 561
           ++N    N P EL     L+ +++       ++++P E+
Sbjct: 604 SNN-IFTNFPVELCQRQTLEELNISQTSGKKVTRLPEEV 641



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 231/447 (51%), Gaps = 29/447 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+L+ + I  LP  V +L +LE L +  NKL  L  +I  +  +  L LA+N L ++   
Sbjct: 302 LNLTGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAISPK 361

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + N ++LR+L+L  N L  +P  +    +L+ L L  N I+ +   I+ L NL  L +  
Sbjct: 362 IENFKELRLLNLDKNLLQSIPKKISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNR 421

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+  +  E+  L N+  L+ + N +  +P EI NC  +  ++L +N ++  P  L  L 
Sbjct: 422 NKMITMTEEISHLSNIHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQ 481

Query: 286 NLTRLRLSYNRLESVPETLS---KCVHL-------NEFNVEGCALSSLP----------- 324
           +L  L  + N +  +P  +S   + +HL         F+   C+L++L            
Sbjct: 482 SLDYLSFNGNYISEIPVDMSFSKQLLHLELNRNKLTVFSKHLCSLTNLEYLDLAKNQIMT 541

Query: 325 -DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
               +S++ S++ + LS NKF ++P        ++  ++   N++ KIP  I S+ K + 
Sbjct: 542 IPSCISAMVSLHVLILSDNKFESFPKE-LCSLKNLRVLDISENKLQKIPLEI-SKLKRIQ 599

Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTN---QISKLSEDIQNLVNLEVLVLSNNLLKK 440
           K+++ +N+ T+ P++L     L ELN+      ++++L E++ ++  L++L +SNN +K 
Sbjct: 600 KLHLSNNIFTNFPVELCQRQTLEELNISQTSGKKVTRLPEEVSHMTQLKILNISNNAIKD 659

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           +P +IG LR L       N++ SLP+    L+ LQ L L+ N + +LP  I  L++L  +
Sbjct: 660 IPKNIGELRSLVSFYASNNQISSLPSSFLSLEVLQSLDLRGNNMTALPSGIYKLSSLKEI 719

Query: 501 SVGENNLQSIPEEIGTLENLH--TLYL 525
           +  +N L   P EI   + +H  T YL
Sbjct: 720 NFDDNPLMRPPMEICKGKEMHMITCYL 746



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 201/457 (43%), Gaps = 72/457 (15%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP----------------------- 210
            ++L    L E P+ + K+  +K LYL  N+IK                           
Sbjct: 139 TVNLDAKGLQEFPVDIVKVKYVKYLYLDKNQIKNFQGIDPGDLLGLEILSLQENGLSSIP 198

Query: 211 -DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
            +IQ   NL +L+   N+I ++P EL +L+N+  L L  NH++ LP  + +   L TL L
Sbjct: 199 LEIQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTLPSGLEHLRYLETLSL 258

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL-- 327
             N L  IPD L +L NL  L L YN+L    ++L     LN  N+ G  + SLP  +  
Sbjct: 259 GKNMLTYIPDSLSSLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNLTGNMIGSLPKEVRE 318

Query: 328 --------------------LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQ 367
                               +  L  I  + L+ NK  A  S     F  +  +N + N 
Sbjct: 319 LKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAI-SPKIENFKELRLLNLDKNL 377

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
           +  IP  I S   NL  +++ DN +  LP  +     L +L++  N++  ++E+I +L N
Sbjct: 378 LQSIPKKI-SHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEISHLSN 436

Query: 428 LEVLVLSNNLLKKLPSSIGNLRK-----------------------LKCLDLEENKLESL 464
           + +L  S N +  +P  I N RK                       L  L    N +  +
Sbjct: 437 IHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEI 496

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P ++ F K+L  L L  N+L    + +  LTNL YL + +N + +IP  I  + +LH L 
Sbjct: 497 PVDMSFSKQLLHLELNRNKLTVFSKHLCSLTNLEYLDLAKNQIMTIPSCISAMVSLHVLI 556

Query: 525 LNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+DN    + P EL    NL+++ +    L +IP EI
Sbjct: 557 LSDNK-FESFPKELCSLKNLRVLDISENKLQKIPLEI 592


>gi|335295357|ref|XP_003130183.2| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Sus scrofa]
          Length = 855

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 232/454 (51%), Gaps = 29/454 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L++S + I+H+P  + +L ++ +L+L  N +   PS +  + NL  L LA+N L  
Sbjct: 208 NLKTLNVSHNQISHIPKELSQLGNIRQLFLNNNCIEGSPSGLESLGNLEILNLAKNKLRH 267

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV------------- 208
           +PD+L++L++LR L+L +N+L   P  +  L  L  L L  N I ++             
Sbjct: 268 IPDTLSSLKKLRGLNLEYNQLTIFPKALCFLPKLISLNLTGNLISSLPKEIKELKNLEKL 327

Query: 209 ---HPDIQYLS-------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
              H  + +L+        +  L + DNK+  +  ++   + L  L L  N L+++P+ I
Sbjct: 328 LLDHNKLTFLAVEIFRLLRMKELQLTDNKLEVISHKIENFRELRILVLDKNLLKDVPENI 387

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
            +C ML  L L  N+L  +P  +  L NL +L ++ N +  +PE +S   ++      G 
Sbjct: 388 SHCVMLEFLSLSDNKLTELPKNIHKLKNLRKLHINRNNIIKIPEDISHLNNMFSLEFAGN 447

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
            ++  P   + +   I  + LS NK   +P  G     S+Y ++F  N I +IP  I S 
Sbjct: 448 IITDFPIE-IKNCRKITKVELSYNKIIYFPL-GLCALESLYYLSFNGNYISEIPEDI-SF 504

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
           +K L  +   +N L      L + + L  L+LG N+I K+   I N+V+L VL+L  N L
Sbjct: 505 SKQLLHLEFNENKLLIFSEHLCSLINLEYLDLGKNKIKKIPPSISNMVSLHVLILCCNKL 564

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           +  P  +  L  L+ LDL EN+++++P EI  LK +Q+L + SNQ +  P  +  L +L 
Sbjct: 565 ETFPIEVCTLENLQVLDLSENQIQNIPPEICNLKGIQKLNISSNQFIYFPIELCQLQSLE 624

Query: 499 YLSVGENN---LQSIPEEIGTLENLHTLYLNDNT 529
            L++ + N   L  +PEE+  +  L  L +++N 
Sbjct: 625 ELNISQINGRKLTRLPEELCNMIQLKELDISNNA 658



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 208/416 (50%), Gaps = 10/416 (2%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           +T L   + +L  ++EL L  NKL  +  +I     L  L L +N L  +P+++++   L
Sbjct: 334 LTFLAVEIFRLLRMKELQLTDNKLEVISHKIENFRELRILVLDKNLLKDVPENISHCVML 393

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
             L L  NKL ELP  ++KL +L+ L++  N I  +  DI +L+N+  L    N I + P
Sbjct: 394 EFLSLSDNKLTELPKNIHKLKNLRKLHINRNNIIKIPEDISHLNNMFSLEFAGNIITDFP 453

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTM--LVTLDLQHNELVNIPDMLGNLINLTRL 290
            E+   + +  ++L++N +   P  +G C +  L  L    N +  IP+ +     L  L
Sbjct: 454 IEIKNCRKITKVELSYNKIIYFP--LGLCALESLYYLSFNGNYISEIPEDISFSKQLLHL 511

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
             + N+L    E L   ++L   ++    +  +P  + S++ S++ + L  NK   +P  
Sbjct: 512 EFNENKLLIFSEHLCSLINLEYLDLGKNKIKKIPPSI-SNMVSLHVLILCCNKLETFPIE 570

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
             T   ++  ++   NQI  IP  I    K + K+N+  N     P++L     L ELN+
Sbjct: 571 VCT-LENLQVLDLSENQIQNIPPEI-CNLKGIQKLNISSNQFIYFPIELCQLQSLEELNI 628

Query: 411 GT---NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
                 ++++L E++ N++ L+ L +SNN ++++P SIG LR L  L    N++  LP  
Sbjct: 629 SQINGRKLTRLPEELCNMIQLKELDISNNAIREMPRSIGELRSLVSLKAYNNQIRYLPPS 688

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
              L  LQ+L L  N L +LP  I +L +L  ++  +N L   P EI   + L+T+
Sbjct: 689 XLSLNALQQLNLSGNNLTALPSGIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTI 744


>gi|149173780|ref|ZP_01852409.1| putative lipoprotein [Planctomyces maris DSM 8797]
 gi|148847310|gb|EDL61644.1| putative lipoprotein [Planctomyces maris DSM 8797]
          Length = 470

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 142/421 (33%), Positives = 206/421 (48%), Gaps = 54/421 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +DLS  S+ HL P+  K+T L    +  N L+ L  +IG + NLT L +++NS+  LPD 
Sbjct: 53  IDLSDDSL-HLFPTDTKVTWLN---ISDNSLSELSPEIGNLKNLTWLNVSDNSIRYLPDE 108

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + NL QL+ LDL  NKL  L     +L+SL+ L L  N +KT+ P+   L NL  L++  
Sbjct: 109 IGNLSQLKELDLSENKLMRLDPEFGQLSSLERLNLSSNWLKTLPPEFGMLENLRDLNLDS 168

Query: 226 NKIRELPP-----------------------ELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N I  LPP                        +G LK L  L    N ++ELP +IGN  
Sbjct: 169 NSIASLPPVFEKLHQLNSLSMNGNEMVTVTDSIGGLKKLRYLYALKNRIKELPPQIGNLE 228

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L TLDL+ N++  +P  +GNL NL RL L  N L S+P  + K  +L + ++    L+S
Sbjct: 229 NLETLDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSLPPEIGKLKNLKDLDLMHNDLTS 288

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LP      LT +  ++L  N  T+ P+                            R K +
Sbjct: 289 LPKE-FGDLTGLEKLSLQNNNLTSIPAS-------------------------IIRLKKI 322

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
            ++ ++ N L+SLP + G  + L  L L  NQ + +  +I  L NLE L  ++N + +LP
Sbjct: 323 PELYLQSNQLSSLPPEFGNHLSLGGLFLDQNQFTSIPPEIWKLQNLERLSFADNQITELP 382

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
           + IG L+KL+ LDL  N ++ LP EI  L  L         L  L   +  L NL YLS 
Sbjct: 383 AEIGRLKKLRSLDLIGNPIKQLPPEISQLTSLSSFSFDDPTLSDL-NHLKPLKNLEYLSF 441

Query: 503 G 503
           G
Sbjct: 442 G 442



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 193/364 (53%), Gaps = 25/364 (6%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
           + ++ L++ DN + EL PE+G LKNL  L+++ N +  LP EIGN + L  LDL  N+L+
Sbjct: 67  TKVTWLNISDNSLSELSPEIGNLKNLTWLNVSDNSIRYLPDEIGNLSQLKELDLSENKLM 126

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            +    G L +L RL LS N L+++P       +L + N++  +++SLP  +   L  +N
Sbjct: 127 RLDPEFGQLSSLERLNLSSNWLKTLPPEFGMLENLRDLNLDSNSIASLPP-VFEKLHQLN 185

Query: 336 NITLSRNKFTAYPS--GGPTQFTSVYSI--------------------NFEHNQIDKIPY 373
           +++++ N+        GG  +   +Y++                    +   NQI+ +P 
Sbjct: 186 SLSMNGNEMVTVTDSIGGLKKLRYLYALKNRIKELPPQIGNLENLETLDLRENQIEFLPS 245

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
            I    +NL ++++  N LTSLP ++G    L +L+L  N ++ L ++  +L  LE L L
Sbjct: 246 EI-GNLRNLKRLDLFKNHLTSLPPEIGKLKNLKDLDLMHNDLTSLPKEFGDLTGLEKLSL 304

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
            NN L  +P+SI  L+K+  L L+ N+L SLP E G    L  L L  NQ  S+P  I  
Sbjct: 305 QNNNLTSIPASIIRLKKIPELYLQSNQLSSLPPEFGNHLSLGGLFLDQNQFTSIPPEIWK 364

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L NL  LS  +N +  +P EIG L+ L +L L  N  +  +P E++  ++L   S D+  
Sbjct: 365 LQNLERLSFADNQITELPAEIGRLKKLRSLDLIGNP-IKQLPPEISQLTSLSSFSFDDPT 423

Query: 554 LSQI 557
           LS +
Sbjct: 424 LSDL 427



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 121/355 (34%), Positives = 186/355 (52%), Gaps = 7/355 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L++S +SI +LP  +  L+ L+EL L  NKL  L  + G +++L  L L+ N L 
Sbjct: 90  KNLTWLNVSDNSIRYLPDEIGNLSQLKELDLSENKLMRLDPEFGQLSSLERLNLSSNWLK 149

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP     L+ LR L+L  N +  LP V  KL  L  L +  N + TV   I  L  L  
Sbjct: 150 TLPPEFGMLENLRDLNLDSNSIASLPPVFEKLHQLNSLSMNGNEMVTVTDSIGGLKKLRY 209

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L    N+I+ELPP++G L+NL TLDL  N +E LP EIGN   L  LDL  N L ++P  
Sbjct: 210 LYALKNRIKELPPQIGNLENLETLDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSLPPE 269

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L +N L S+P+       L + +++   L+S+P  ++  L  I  + L 
Sbjct: 270 IGKLKNLKDLDLMHNDLTSLPKEFGDLTGLEKLSLQNNNLTSIPASII-RLKKIPELYLQ 328

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ ++ P        S+  +  + NQ   IP  I+ + +NL +++  DN +T LP ++G
Sbjct: 329 SNQLSSLPPEFGNHL-SLGGLFLDQNQFTSIPPEIW-KLQNLERLSFADNQITELPAEIG 386

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
               L  L+L  N I +L  +I  L +L      +  L    S + +L+ LK L+
Sbjct: 387 RLKKLRSLDLIGNPIKQLPPEISQLTSLSSFSFDDPTL----SDLNHLKPLKNLE 437



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/321 (34%), Positives = 156/321 (48%), Gaps = 27/321 (8%)

Query: 241 LVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESV 300
           +  L+++ N L EL  EIGN   L  L++  N +  +PD +GNL  L  L LS N+L  +
Sbjct: 69  VTWLNISDNSLSELSPEIGNLKNLTWLNVSDNSIRYLPDEIGNLSQLKELDLSENKLMRL 128

Query: 301 PETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYS 360
                +   L   N+    L +LP                       P  G     ++  
Sbjct: 129 DPEFGQLSSLERLNLSSNWLKTLP-----------------------PEFG--MLENLRD 163

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
           +N + N I  +P  +F +   L+ ++M  N + ++   +G    L  L    N+I +L  
Sbjct: 164 LNLDSNSIASLP-PVFEKLHQLNSLSMNGNEMVTVTDSIGGLKKLRYLYALKNRIKELPP 222

Query: 421 DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQ 480
            I NL NLE L L  N ++ LPS IGNLR LK LDL +N L SLP EIG LK L+ L L 
Sbjct: 223 QIGNLENLETLDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSLPPEIGKLKNLKDLDLM 282

Query: 481 SNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELAL 540
            N L SLP+  G LT L  LS+  NNL SIP  I  L+ +  LYL  N  L+++P E   
Sbjct: 283 HNDLTSLPKEFGDLTGLEKLSLQNNNLTSIPASIIRLKKIPELYLQSNQ-LSSLPPEFGN 341

Query: 541 CSNLQIMSLDNCPLSQIPSEI 561
             +L  + LD    + IP EI
Sbjct: 342 HLSLGGLFLDQNQFTSIPPEI 362


>gi|421087858|ref|ZP_15548693.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102791|ref|ZP_15563395.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410367905|gb|EKP23289.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410429599|gb|EKP73975.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 488

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 148/434 (34%), Positives = 233/434 (53%), Gaps = 11/434 (2%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS+      P  + +L +LE L L  N++  LP +I  + NL  L L  N LT 
Sbjct: 38  NVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTI 97

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  +  L+ L +L L +N+++ LP  + K  +L+ L LR NR+ T+   I  L  L  L
Sbjct: 98  VPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEEL 157

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++ +N+I+ LP E+G L+NL   +L+ N L  +PKEIGN   L  L L++N+L  +P  +
Sbjct: 158 NLENNRIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQM 217

Query: 282 GNLINLTRLRLSYNRL-----ESVPETLSKC-VHLNEFNVEGCALSSLPDGLLSSLTSIN 335
             L +L  L L  N L     + +   L  C + L +   EG    +L   L   L  I 
Sbjct: 218 EKLQDLEVLNLLINPLLSKERKKIQALLPDCDIDLRDVE-EGETYRNLNLALEQPL-KIL 275

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
           +++L   +F  + S    +  ++ S++     +  +P  I  R K+L  +++  N L SL
Sbjct: 276 SLSLEYQQFPLF-SKEILRLKNLRSLSLYDTSLVALPKEIV-RLKHLEHLSLGLNQLKSL 333

Query: 396 PLDLGTWVGLTELNLGT-NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           P ++G    L  L++G  N+   L ++I  L NL  L+L+ N  K  P  I  L+KL  L
Sbjct: 334 PKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVIL 393

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           ++  N+L++LP +IG LK LQ L L  N+L +LP  IG L NL+ L +  N ++++PEEI
Sbjct: 394 NVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEI 453

Query: 515 GTLENLHTLYLNDN 528
             L+NL  L L +N
Sbjct: 454 ARLQNLRKLTLYEN 467



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 153/439 (34%), Positives = 226/439 (51%), Gaps = 24/439 (5%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L   K A  P +I  +  L  L L EN +T LP  +  L+ L+ L L  NKL  +P  
Sbjct: 42  LDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 101

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           +++L +L IL L  NRI T+  +I+   NL  L +R N++  LP  +GELK L  L+L +
Sbjct: 102 IWELENLTILRLENNRISTLPKEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEELNLEN 161

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N ++ LPKEIG    L   +L  N+L +IP  +GNL NL  L L  N+L+++P  + K  
Sbjct: 162 NRIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQ 221

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLS--------RNKFTAYPSGGPTQFTSVYS 360
            L   N+    L S     + +L    +I L         RN   A       Q   + S
Sbjct: 222 DLEVLNLLINPLLSKERKKIQALLPDCDIDLRDVEEGETYRNLNLAL-----EQPLKILS 276

Query: 361 INFEHNQIDKIPYGIFS----RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS 416
           ++ E+ Q     + +FS    R KNL  +++ D  L +LP ++     L  L+LG NQ+ 
Sbjct: 277 LSLEYQQ-----FPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLK 331

Query: 417 KLSEDIQNLVNLEVL-VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
            L ++I  L NL  L + +NN  + LP  I  L+ L+ L L +N+ +  P EI  LK+L 
Sbjct: 332 SLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLV 391

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
            L + +NQL +LP  IG L  L  L +  N L ++P EIG L NL  LYL  N  +  +P
Sbjct: 392 ILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNR-IKTLP 450

Query: 536 FELALCSNLQIMSLDNCPL 554
            E+A   NL+ ++L   P+
Sbjct: 451 EEIARLQNLRKLTLYENPI 469



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 183/399 (45%), Gaps = 58/399 (14%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
           SN+ +L +   K    P E+ EL+ L  L L  N +  LP+EI     L  L L  N+L 
Sbjct: 37  SNVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLT 96

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL-------- 327
            +P  +  L NLT LRL  NR+ ++P+ + K  +L E ++ G  L +LP+G+        
Sbjct: 97  IVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEE 156

Query: 328 --------------LSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKI 371
                         + +L ++    LS NK  + P   G       +Y    E+NQ+  +
Sbjct: 157 LNLENNRIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLY---LENNQLKTL 213

Query: 372 PYGIFSRAKNLSKVNMKDNLLTS----------------------------LPLDLGTWV 403
           P  +  + ++L  +N+  N L S                            L L L   +
Sbjct: 214 PRQM-EKLQDLEVLNLLINPLLSKERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPL 272

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            +  L+L   Q    S++I  L NL  L L +  L  LP  I  L+ L+ L L  N+L+S
Sbjct: 273 KILSLSLEYQQFPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKS 332

Query: 464 LPNEIGFLKELQRL-ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
           LP EIG L+ L+ L I  +N+   LP+ I  L NL  L + +N  +  P+EI  L+ L  
Sbjct: 333 LPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVI 392

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L +N N  L+ +P ++     LQ++ L +  L+ +PSEI
Sbjct: 393 LNVNTNQ-LDALPEKIGRLKGLQMLDLSHNRLTTLPSEI 430



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 162/367 (44%), Gaps = 82/367 (22%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLAS---------------------- 138
           EN+  L L  + I+ LP  +EK  +L+EL L GN+L +                      
Sbjct: 106 ENLTILRLENNRISTLPKEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEELNLENNRIK 165

Query: 139 -LPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
            LP +IG + NL    L+ N L S+P  + NLQ LR+L L +N+L  LP  + KL  L++
Sbjct: 166 ILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 225

Query: 198 LYLRFN--------RIKTVHPD-------------------------------------- 211
           L L  N        +I+ + PD                                      
Sbjct: 226 LNLLINPLLSKERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFP 285

Query: 212 -----IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
                I  L NL  LS+ D  +  LP E+  LK+L  L L  N L+ LPKEIG    L +
Sbjct: 286 LFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRS 345

Query: 267 LDL-QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
           LD+  +NE   +P  +  L NL  L L+ NR +  P+ + +   L   NV    L +LP+
Sbjct: 346 LDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPE 405

Query: 326 GLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
             +  L  +  + LS N+ T  PS  G     T +Y    ++N+I  +P  I +R +NL 
Sbjct: 406 K-IGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELY---LQYNRIKTLPEEI-ARLQNLR 460

Query: 384 KVNMKDN 390
           K+ + +N
Sbjct: 461 KLTLYEN 467



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 189/421 (44%), Gaps = 80/421 (19%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKL-----------------------ASLPSQ 142
           L L ++ IT LP  + KL +L+ELYL GNKL                       ++LP +
Sbjct: 65  LKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLENNRISTLPKE 124

Query: 143 IGYVTNLTCLGLAENSLTSLPDSLAN-----------------------LQQLRVLDLRH 179
           I    NL  L L  N L +LP+ +                         L+ L + +L  
Sbjct: 125 IEKSKNLQELDLRGNRLVTLPEGIGELKLLEELNLENNRIKILPKEIGALENLWIFNLSG 184

Query: 180 NKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDN--------KIREL 231
           NKL  +P  +  L +L++LYL  N++KT+   ++ L +L +L++  N        KI+ L
Sbjct: 185 NKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQAL 244

Query: 232 PP---------ELGE-LKNL----------VTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
            P         E GE  +NL          ++L L +       KEI     L +L L  
Sbjct: 245 LPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFPLFSKEILRLKNLRSLSLYD 304

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG-CALSSLPDGLLSS 330
             LV +P  +  L +L  L L  N+L+S+P+ +    +L   ++        LP   ++ 
Sbjct: 305 TSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKE-IAR 363

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           L ++ ++ L++N+F  +P     +   +  +N   NQ+D +P  I  R K L  +++  N
Sbjct: 364 LQNLRSLLLNQNRFKIFPK-EIWELKKLVILNVNTNQLDALPEKI-GRLKGLQMLDLSHN 421

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            LT+LP ++G    LTEL L  N+I  L E+I  L NL  L L  N +   P  +  +RK
Sbjct: 422 RLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYENPIP--PQELDKIRK 479

Query: 451 L 451
           L
Sbjct: 480 L 480


>gi|417765366|ref|ZP_12413328.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352303|gb|EJP04499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 385

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 138/394 (35%), Positives = 205/394 (52%), Gaps = 55/394 (13%)

Query: 145 YVTNLTCLGLAENS------LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL 198
           +V +LT     EN        T+L ++L N  ++R+LDL  +KL  LP  + +L +L+IL
Sbjct: 21  FVCSLTQFHAEENHTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQIL 80

Query: 199 YLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
               N++ T+  +I  L NL  L +++N++  LP E+G+L+NL  L L +N L  LP+EI
Sbjct: 81  NSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEI 140

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
           G    L  L+L  N L  +P  +G L NL  L LS NRL  +PE + +   L + ++ G 
Sbjct: 141 GKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGG- 199

Query: 319 ALSSLPDGLLSSLTSINNITLSRNK-FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
                                 +NK FT  P                            +
Sbjct: 200 ----------------------KNKPFTILPKE-------------------------IT 212

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           + +NL ++++K N LT LP ++G    L  L+L  N+++ L ++I  L NL VL LS N 
Sbjct: 213 QLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQ 272

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L  LP  I  L+ L+ LDL +N+L +LP EIG L+ LQ+L L  NQL +LP+ IG L  L
Sbjct: 273 LTILPKEITQLQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKL 332

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
             L +  N L ++PEEI  L+NL  LYL++N  L
Sbjct: 333 ESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLL 366



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 166/296 (56%), Gaps = 5/296 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+   + +T LP  + KL +L+EL+L  N+L +LP +IG + NL  L L  N LT
Sbjct: 75  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 134

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L+L  N+LN LP  + +L +L+ LYL  NR+  +  +I  L +L  
Sbjct: 135 TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRK 194

Query: 221 LSM--RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
           LS+  ++     LP E+ +L+NL  L L  N L  LPKEIG    L  LDL  N L  +P
Sbjct: 195 LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILP 254

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L NL  L LS N+L  +P+ +++  +L   ++    L++LP   +  L ++  + 
Sbjct: 255 KEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQVLDLYQNRLTTLPKE-IGQLQNLQKLH 313

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
           LSRN+ T  P     +   + S+  +HNQ+  +P  I  + KNL K+ + +N L S
Sbjct: 314 LSRNQLTTLPK-EIGRLQKLESLGLDHNQLATLPEEI-KQLKNLKKLYLHNNPLLS 367



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/320 (33%), Positives = 165/320 (51%), Gaps = 29/320 (9%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           LDL+ + L+ LPKEIG    L  L+ ++N+L  +P  +G L NL  L L  N+L ++PE 
Sbjct: 57  LDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEE 116

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           + +  +L   ++    L++LP+ +   L ++  + L  N+    P               
Sbjct: 117 IGQLQNLKVLHLNNNQLTTLPEEI-GKLQNLQELNLFVNRLNILPKE------------- 162

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ--ISKLSED 421
                         R +NL ++ +  N LT LP ++G    L +L+LG      + L ++
Sbjct: 163 ------------IGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKE 210

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           I  L NL+ L L  N L  LP  IG L+ L+ LDL +N+L  LP EIG LK L  L L  
Sbjct: 211 ITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSG 270

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           NQL  LP+ I  L NL  L + +N L ++P+EIG L+NL  L+L+ N  L  +P E+   
Sbjct: 271 NQLTILPKEITQLQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQ-LTTLPKEIGRL 329

Query: 542 SNLQIMSLDNCPLSQIPSEI 561
             L+ + LD+  L+ +P EI
Sbjct: 330 QKLESLGLDHNQLATLPEEI 349



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 112/325 (34%), Positives = 177/325 (54%), Gaps = 7/325 (2%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L  +KL  LP +IG + NL  L    N LT+LP  +  LQ L+ L L++N+L  LP  
Sbjct: 57  LDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEE 116

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +LK+L+L  N++ T+  +I  L NL  L++  N++  LP E+G L+NL  L L+ 
Sbjct: 117 IGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSL 176

Query: 249 NHLEELPKEIGNCTMLVTLDL--QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK 306
           N L  LP+EIG    L  L L  ++     +P  +  L NL  L L +NRL  +P+ + +
Sbjct: 177 NRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQ 236

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
             +L   ++    L+ LP   +  L ++  + LS N+ T  P    TQ  ++  ++   N
Sbjct: 237 LQNLRILDLYQNRLTILPKE-IGQLKNLLVLDLSGNQLTILPK-EITQLQNLQVLDLYQN 294

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
           ++  +P  I  + +NL K+++  N LT+LP ++G    L  L L  NQ++ L E+I+ L 
Sbjct: 295 RLTTLPKEI-GQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLK 353

Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKL 451
           NL+ L L NN L  L   I  +RKL
Sbjct: 354 NLKKLYLHNNPL--LSEKIERIRKL 376



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 125/240 (52%), Gaps = 30/240 (12%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYV------------ 146
           K +N+  L+L  + +  LP  + +L +L+ELYL  N+L  LP +IG +            
Sbjct: 142 KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKN 201

Query: 147 -------------TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLT 193
                         NL  L L  N LT LP  +  LQ LR+LDL  N+L  LP  + +L 
Sbjct: 202 KPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLK 261

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           +L +L L  N++  +  +I  L NL +L +  N++  LP E+G+L+NL  L L+ N L  
Sbjct: 262 NLLVLDLSGNQLTILPKEITQLQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTT 321

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN-----RLESVPETLSKCV 308
           LPKEIG    L +L L HN+L  +P+ +  L NL +L L  N     ++E + + L +C+
Sbjct: 322 LPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRKLLPQCI 381



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/146 (44%), Positives = 89/146 (60%), Gaps = 1/146 (0%)

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           + L+E ++N   + +L LS + LK LP  IG L+ L+ L+ E N+L +LP EIG L+ LQ
Sbjct: 42  TNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQ 101

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
            L LQ+NQL +LP  IG L NL  L +  N L ++PEEIG L+NL  L L  N  LN +P
Sbjct: 102 ELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNR-LNILP 160

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEI 561
            E+    NLQ + L    L+ +P EI
Sbjct: 161 KEIGRLQNLQELYLSLNRLTILPEEI 186


>gi|255079004|ref|XP_002503082.1| predicted protein [Micromonas sp. RCC299]
 gi|226518348|gb|ACO64340.1| predicted protein [Micromonas sp. RCC299]
          Length = 333

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 122/339 (35%), Positives = 189/339 (55%), Gaps = 12/339 (3%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           LDL +  L  LP  + +L+ L  L L  N + T+  +I +L++L +L + DN++R LP E
Sbjct: 1   LDLSYCGLKSLPAEIGQLSDLSTLRLTGNMLFTLPSEIGFLTSLKILKLNDNRLRSLPEE 60

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL---VNIPDMLGNLINLTRLR 291
           +G L +L+ LDL+ N L  L  E+     L  L + +N+L    ++P  +G L +LT L 
Sbjct: 61  VGFLASLILLDLSGNQLTSLNAELARLKSLGYLHVGNNQLSSLTSLPAEIGQLTSLTELY 120

Query: 292 LSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGG 351
           L  N+L  +P  + +   LN  N++   L++LP  +      +  +TLS N+ T  P+  
Sbjct: 121 LDNNKLTDLPAEIVQLERLNRLNLDNNKLTTLPPEI-GQFRDLGELTLSHNQLTTLPA-- 177

Query: 352 PTQFTSVYSI---NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
             +   +Y++   N ++NQ+  +P   +  A  L K+++  N LT+LP  +G +  L  L
Sbjct: 178 --EIGQIYTLGLLNLDNNQLTSLPLENWP-ATYLEKLHLSGNKLTTLPAKIGQFKDLWLL 234

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           +L  NQ++ L  +I  L +L+VL L  N L  LP+ IG L  L+ L L  N+L SLP EI
Sbjct: 235 DLSRNQLTTLPAEIGQLTSLQVLRLLVNKLTSLPAEIGQLASLRKLYLSWNELTSLPAEI 294

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           G L  L+ L LQ NQL S+P  IG LT+L  L +GEN L
Sbjct: 295 GQLTSLEMLDLQYNQLTSVPDEIGQLTSLELLGLGENQL 333



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 187/359 (52%), Gaps = 29/359 (8%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS   +  LP  + +L+ L  L L GN L +LPS+IG++T+L  L L +N L SLP+ 
Sbjct: 1   LDLSYCGLKSLPAEIGQLSDLSTLRLTGNMLFTLPSEIGFLTSLKILKLNDNRLRSLPEE 60

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH---PDIQYLSNLSMLS 222
           +  L  L +LDL  N+L  L   + +L SL  L++  N++ ++     +I  L++L+ L 
Sbjct: 61  VGFLASLILLDLSGNQLTSLNAELARLKSLGYLHVGNNQLSSLTSLPAEIGQLTSLTELY 120

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           + +NK+ +LP E+ +L+ L  L+L +N L  LP EIG    L  L L HN+L  +P  +G
Sbjct: 121 LDNNKLTDLPAEIVQLERLNRLNLDNNKLTTLPPEIGQFRDLGELTLSHNQLTTLPAEIG 180

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            +  L  L L  N+L S+P       +L + ++ G  L++LP  +               
Sbjct: 181 QIYTLGLLNLDNNQLTSLPLENWPATYLEKLHLSGNKLTTLPAKI--------------- 225

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
                      QF  ++ ++   NQ+  +P  I  +  +L  + +  N LTSLP ++G  
Sbjct: 226 ----------GQFKDLWLLDLSRNQLTTLPAEI-GQLTSLQVLRLLVNKLTSLPAEIGQL 274

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
             L +L L  N+++ L  +I  L +LE+L L  N L  +P  IG L  L+ L L EN+L
Sbjct: 275 ASLRKLYLSWNELTSLPAEIGQLTSLEMLDLQYNQLTSVPDEIGQLTSLELLGLGENQL 333



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/208 (38%), Positives = 118/208 (56%), Gaps = 2/208 (0%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           ++  E ++ +  N LNLD +K  +T LPP + +   L EL L  N+L +LP++IG +  L
Sbjct: 128 DLPAEIVQLERLNRLNLDNNK--LTTLPPEIGQFRDLGELTLSHNQLTTLPAEIGQIYTL 185

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
             L L  N LTSLP        L  L L  NKL  LP  + +   L +L L  N++ T+ 
Sbjct: 186 GLLNLDNNQLTSLPLENWPATYLEKLHLSGNKLTTLPAKIGQFKDLWLLDLSRNQLTTLP 245

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
            +I  L++L +L +  NK+  LP E+G+L +L  L L+ N L  LP EIG  T L  LDL
Sbjct: 246 AEIGQLTSLQVLRLLVNKLTSLPAEIGQLASLRKLYLSWNELTSLPAEIGQLTSLEMLDL 305

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRL 297
           Q+N+L ++PD +G L +L  L L  N+L
Sbjct: 306 QYNQLTSVPDEIGQLTSLELLGLGENQL 333



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 149/318 (46%), Gaps = 47/318 (14%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           LDL++  L+ LP EIG  + L TL L  N L  +P  +G L +L  L+L+ NRL S+PE 
Sbjct: 1   LDLSYCGLKSLPAEIGQLSDLSTLRLTGNMLFTLPSEIGFLTSLKILKLNDNRLRSLPEE 60

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           +     L   ++ G  L+SL            N  L+R K   Y   G  Q +S      
Sbjct: 61  VGFLASLILLDLSGNQLTSL------------NAELARLKSLGYLHVGNNQLSS------ 102

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
                                       LTSLP ++G    LTEL L  N+++ L  +I 
Sbjct: 103 ----------------------------LTSLPAEIGQLTSLTELYLDNNKLTDLPAEIV 134

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
            L  L  L L NN L  LP  IG  R L  L L  N+L +LP EIG +  L  L L +NQ
Sbjct: 135 QLERLNRLNLDNNKLTTLPPEIGQFRDLGELTLSHNQLTTLPAEIGQIYTLGLLNLDNNQ 194

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
           L SLP      T L  L +  N L ++P +IG  ++L  L L+ N  L  +P E+   ++
Sbjct: 195 LTSLPLENWPATYLEKLHLSGNKLTTLPAKIGQFKDLWLLDLSRNQ-LTTLPAEIGQLTS 253

Query: 544 LQIMSLDNCPLSQIPSEI 561
           LQ++ L    L+ +P+EI
Sbjct: 254 LQVLRLLVNKLTSLPAEI 271



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 78/158 (49%), Gaps = 27/158 (17%)

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           L+L    +  L  +I  L +L  L L+ N+L  LPS IG L  LK L L +N+L SLP E
Sbjct: 1   LDLSYCGLKSLPAEIGQLSDLSTLRLTGNMLFTLPSEIGFLTSLKILKLNDNRLRSLPEE 60

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI---PEEIGTLENLHTLY 524
           +GFL  L  L L  NQL SL   +  L +L YL VG N L S+   P EIG L +L  LY
Sbjct: 61  VGFLASLILLDLSGNQLTSLNAELARLKSLGYLHVGNNQLSSLTSLPAEIGQLTSLTELY 120

Query: 525 LNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           L                        DN  L+ +P+EIV
Sbjct: 121 L------------------------DNNKLTDLPAEIV 134


>gi|455790005|gb|EMF41901.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 488

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 148/434 (34%), Positives = 234/434 (53%), Gaps = 11/434 (2%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS+      P  + +L +LE L L  N++  LP +I  + NL  L L  N LT 
Sbjct: 38  NVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTI 97

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  +  L+ L +L L +N+++ LP  + K  +L+ L LR NR+ T+  +I  L  L  L
Sbjct: 98  VPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEEL 157

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++ +N+I+ LP E+G L+NL   +L+ N L  +PKEIGN   L  L L++N+L  +P  +
Sbjct: 158 NLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQM 217

Query: 282 GNLINLTRLRLSYNRL-----ESVPETLSKC-VHLNEFNVEGCALSSLPDGLLSSLTSIN 335
             L +L  L L  N L     + +   L  C + L +   EG    +L   L   L  I 
Sbjct: 218 EKLQDLEVLNLLINPLLSEERKKIQALLPDCDIDLRDVE-EGETYRNLNLALEQPL-KIL 275

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
           +++L   +F  + S    +  ++ S++     +  +P  I  R K+L  +++  N L SL
Sbjct: 276 SLSLEYQQFPLF-SKEILRLKNLRSLSLYDTSLVALPKEIV-RLKHLEHLSLGLNQLKSL 333

Query: 396 PLDLGTWVGLTELNLGT-NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           P ++G    L  L++G  N+   L ++I  L NL  L+L+ N  K  P  I  L+KL  L
Sbjct: 334 PKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVIL 393

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           ++  N+L++LP +IG LK LQ L L  N+L +LP  IG L NL+ L +  N ++++PEEI
Sbjct: 394 NVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEI 453

Query: 515 GTLENLHTLYLNDN 528
             L+NL  L L +N
Sbjct: 454 ARLQNLRKLTLYEN 467



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 154/440 (35%), Positives = 227/440 (51%), Gaps = 26/440 (5%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L   K A  P +I  +  L  L L EN +T LP  +  L+ L+ L L  NKL  +P  
Sbjct: 42  LDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 101

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           +++L +L IL L  NRI T+  +I+   NL  L++R N++  LP E+GELK L  L+L +
Sbjct: 102 IWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLEN 161

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N ++ LP EIG    L   +L  N+L +IP  +GNL NL  L L  N+L+++P  + K  
Sbjct: 162 NRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQ 221

Query: 309 HLNEFNVEGCALSS---------LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVY 359
            L   N+    L S         LPD  +  L  +      RN   A       Q   + 
Sbjct: 222 DLEVLNLLINPLLSEERKKIQALLPDCDI-DLRDVEEGETYRNLNLAL-----EQPLKIL 275

Query: 360 SINFEHNQIDKIPYGIFS----RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
           S++ E+ Q     + +FS    R KNL  +++ D  L +LP ++     L  L+LG NQ+
Sbjct: 276 SLSLEYQQ-----FPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQL 330

Query: 416 SKLSEDIQNLVNLEVL-VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
             L ++I  L NL  L + +NN  + LP  I  L+ L+ L L +N+ +  P EI  LK+L
Sbjct: 331 KSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKL 390

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
             L + +NQL +LP  IG L  L  L +  N L ++P EIG L NL  LYL  N  +  +
Sbjct: 391 VILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNR-IKTL 449

Query: 535 PFELALCSNLQIMSLDNCPL 554
           P E+A   NL+ ++L   P+
Sbjct: 450 PEEIARLQNLRKLTLYENPI 469



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 162/367 (44%), Gaps = 82/367 (22%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGY--------------- 145
           EN+  L L  + I+ LP  +EK  +L+EL L GN+L +LP +IG                
Sbjct: 106 ENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIK 165

Query: 146 --------VTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
                   + NL    L+ N L S+P  + NLQ LR+L L +N+L  LP  + KL  L++
Sbjct: 166 ILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 225

Query: 198 LYLRFN--------RIKTVHPD-------------------------------------- 211
           L L  N        +I+ + PD                                      
Sbjct: 226 LNLLINPLLSEERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFP 285

Query: 212 -----IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
                I  L NL  LS+ D  +  LP E+  LK+L  L L  N L+ LPKEIG    L +
Sbjct: 286 LFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRS 345

Query: 267 LDL-QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
           LD+  +NE   +P  +  L NL  L L+ NR +  P+ + +   L   NV    L +LP+
Sbjct: 346 LDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPE 405

Query: 326 GLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
             +  L  +  + LS N+ T  PS  G     T +Y    ++N+I  +P  I +R +NL 
Sbjct: 406 K-IGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELY---LQYNRIKTLPEEI-ARLQNLR 460

Query: 384 KVNMKDN 390
           K+ + +N
Sbjct: 461 KLTLYEN 467



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 190/402 (47%), Gaps = 41/402 (10%)

Query: 193 TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLE 252
           ++++IL L   +      +I  L  L +L + +N+I  LP E+ +LKNL  L L  N L 
Sbjct: 37  SNVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLT 96

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
            +PKEI     L  L L++N +  +P  +    NL  L L  NRL ++P  + +   L E
Sbjct: 97  IVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEE 156

Query: 313 FNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQI 368
            N+E   +  LP+  G L +L   N   LS NK  + P   G       +Y    E+NQ+
Sbjct: 157 LNLENNRIKILPNEIGALENLWIFN---LSGNKLASIPKEIGNLQNLRMLY---LENNQL 210

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTS----------------------------LPLDLG 400
             +P  +  + ++L  +N+  N L S                            L L L 
Sbjct: 211 KTLPRQM-EKLQDLEVLNLLINPLLSEERKKIQALLPDCDIDLRDVEEGETYRNLNLALE 269

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
             + +  L+L   Q    S++I  L NL  L L +  L  LP  I  L+ L+ L L  N+
Sbjct: 270 QPLKILSLSLEYQQFPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQ 329

Query: 461 LESLPNEIGFLKELQRL-ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           L+SLP EIG L+ L+ L I  +N+   LP+ I  L NL  L + +N  +  P+EI  L+ 
Sbjct: 330 LKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKK 389

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L +N N  L+ +P ++     LQ++ L +  L+ +PSEI
Sbjct: 390 LVILNVNTNQ-LDALPEKIGRLKGLQMLDLSHNRLTTLPSEI 430


>gi|440804214|gb|ELR25091.1| Leucinerich repeat protein lrrA, putative [Acanthamoeba castellanii
           str. Neff]
          Length = 507

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 145/423 (34%), Positives = 210/423 (49%), Gaps = 32/423 (7%)

Query: 146 VTNLTC--LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRF 202
           V  L C  L LAEN +TSLPD L  L ++ VLDL +N++N +P  +  L  +L+ L+L  
Sbjct: 34  VRQLQCRELILAENDITSLPDELGKLARIEVLDLGNNRINHVPPALGDLAPTLRELWLCN 93

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N++    P                    L P LG+L+ L  LDL+ N LEELP E+G  +
Sbjct: 94  NKLFFTAP--------------------LTPNLGKLRLLQKLDLSGNQLEELPAELGQLS 133

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  LD+  N L   P   GNL  L   +   NRL ++   +     L+E+ +   ALS 
Sbjct: 134 ALQYLDISGNNLQVFPPEFGNLRALLIFKAENNRLRALAPEVGNLTELSEWYLANNALSR 193

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
           LP  +  +L ++    LS NK    P+  G       +S+N   N     P     +   
Sbjct: 194 LPPQI-GNLRNLQVFDLSNNKLQDLPAEMGYLARLRSFSVNENSNLKTLFP---LEQLNQ 249

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN-QISKLSEDIQNLVNLEVLVLSNNLLKK 440
           L  + +++ LL  LP DL T   + EL+L  N QI ++  +I  L  L  L L  N L  
Sbjct: 250 LQYMGLRNTLLDELPEDLCTLPSIVELDLRNNLQIGRIPPEIGRLTTLRRLDLFGNKLTN 309

Query: 441 LPSSIGNLRKLKCLDLEENKL--ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           LP+ IGNL  L+ LDL +N L  E +P E+G L  L+RL++  N L +LP  I  +  L 
Sbjct: 310 LPAEIGNLVNLELLDLRQNSLAIELIPPELGRLTRLERLLMSKNNLATLPAEIKTMYALK 369

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L    N L S+PEEIG L NL  L ++ N  L  +P  +AL + L  + +    + ++P
Sbjct: 370 ELDAANNVLLSVPEEIGCLSNLQKLNVSGNRLL-TLPPTIALLTALTKLDIKGNEIHELP 428

Query: 559 SEI 561
           SE+
Sbjct: 429 SEV 431



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 211/437 (48%), Gaps = 13/437 (2%)

Query: 106 LDLSKSSITHLPPSVEKLT-HLEELYLYGNKL---ASLPSQIGYVTNLTCLGLAENSLTS 161
           LDL  + I H+PP++  L   L EL+L  NKL   A L   +G +  L  L L+ N L  
Sbjct: 65  LDLGNNRINHVPPALGDLAPTLRELWLCNNKLFFTAPLTPNLGKLRLLQKLDLSGNQLEE 124

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  L  L  L+ LD+  N L   P     L +L I     NR++ + P++  L+ LS  
Sbjct: 125 LPAELGQLSALQYLDISGNNLQVFPPEFGNLRALLIFKAENNRLRALAPEVGNLTELSEW 184

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + +N +  LPP++G L+NL   DL++N L++LP E+G    L +  +  N  +     L
Sbjct: 185 YLANNALSRLPPQIGNLRNLQVFDLSNNKLQDLPAEMGYLARLRSFSVNENSNLKTLFPL 244

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE-GCALSSLPDGLLSSLTSINNITLS 340
             L  L  + L    L+ +PE L     + E ++     +  +P   +  LT++  + L 
Sbjct: 245 EQLNQLQYMGLRNTLLDELPEDLCTLPSIVELDLRNNLQIGRIPPE-IGRLTTLRRLDLF 303

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHN--QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
            NK T  P+       ++  ++   N   I+ IP  +  R   L ++ M  N L +LP +
Sbjct: 304 GNKLTNLPA-EIGNLVNLELLDLRQNSLAIELIPPEL-GRLTRLERLLMSKNNLATLPAE 361

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           + T   L EL+   N +  + E+I  L NL+ L +S N L  LP +I  L  L  LD++ 
Sbjct: 362 IKTMYALKELDAANNVLLSVPEEIGCLSNLQKLNVSGNRLLTLPPTIALLTALTKLDIKG 421

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI---G 515
           N++  LP+E+G L  + ++ +  N + +LP  +G L  L  + +  N L   P ++   G
Sbjct: 422 NEIHELPSEVGELSSVVKIDMSHNMMTNLPWELGSLPKLEVMDISHNPLVIPPPDVLNRG 481

Query: 516 TLENLHTLYLNDNTCLN 532
           T   L  L  N+ T  N
Sbjct: 482 TPAVLAWLRKNEKTGRN 498



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 112/207 (54%), Gaps = 26/207 (12%)

Query: 98  CKEENILNLDLSKS-SITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE 156
           C   +I+ LDL  +  I  +PP + +LT L  L L+GNKL +LP++IG + NL  L L +
Sbjct: 268 CTLPSIVELDLRNNLQIGRIPPEIGRLTTLRRLDLFGNKLTNLPAEIGNLVNLELLDLRQ 327

Query: 157 NSLT-------------------------SLPDSLANLQQLRVLDLRHNKLNELPMVVYK 191
           NSL                          +LP  +  +  L+ LD  +N L  +P  +  
Sbjct: 328 NSLAIELIPPELGRLTRLERLLMSKNNLATLPAEIKTMYALKELDAANNVLLSVPEEIGC 387

Query: 192 LTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHL 251
           L++L+ L +  NR+ T+ P I  L+ L+ L ++ N+I ELP E+GEL ++V +D++HN +
Sbjct: 388 LSNLQKLNVSGNRLLTLPPTIALLTALTKLDIKGNEIHELPSEVGELSSVVKIDMSHNMM 447

Query: 252 EELPKEIGNCTMLVTLDLQHNELVNIP 278
             LP E+G+   L  +D+ HN LV  P
Sbjct: 448 TNLPWELGSLPKLEVMDISHNPLVIPP 474



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 145/322 (45%), Gaps = 31/322 (9%)

Query: 244 LDLAHNHLEELPKEIGN--CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
           +DL    + E+PK +    C  L+   L  N++ ++PD LG L  +  L L  NR+  VP
Sbjct: 20  VDLRKQGIPEIPKSVRQLQCRELI---LAENDITSLPDELGKLARIEVLDLGNNRINHVP 76

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK--FTAYPSGGPTQFTSVY 359
             L                            ++  + L  NK  FTA  +    +   + 
Sbjct: 77  PALGDLA-----------------------PTLRELWLCNNKLFFTAPLTPNLGKLRLLQ 113

Query: 360 SINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS 419
            ++   NQ++++P  +  +   L  +++  N L   P + G    L       N++  L+
Sbjct: 114 KLDLSGNQLEELPAEL-GQLSALQYLDISGNNLQVFPPEFGNLRALLIFKAENNRLRALA 172

Query: 420 EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLIL 479
            ++ NL  L    L+NN L +LP  IGNLR L+  DL  NKL+ LP E+G+L  L+   +
Sbjct: 173 PEVGNLTELSEWYLANNALSRLPPQIGNLRNLQVFDLSNNKLQDLPAEMGYLARLRSFSV 232

Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
             N  +     +  L  L Y+ +    L  +PE++ TL ++  L L +N  +  IP E+ 
Sbjct: 233 NENSNLKTLFPLEQLNQLQYMGLRNTLLDELPEDLCTLPSIVELDLRNNLQIGRIPPEIG 292

Query: 540 LCSNLQIMSLDNCPLSQIPSEI 561
             + L+ + L    L+ +P+EI
Sbjct: 293 RLTTLRRLDLFGNKLTNLPAEI 314


>gi|428297417|ref|YP_007135723.1| adenylate cyclase [Calothrix sp. PCC 6303]
 gi|428233961|gb|AFY99750.1| Adenylate cyclase [Calothrix sp. PCC 6303]
          Length = 1034

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 131/368 (35%), Positives = 189/368 (51%), Gaps = 15/368 (4%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++    + ELP E+G L +L  L L  N L  LP+  GN T L  L L  N+L  +P+ 
Sbjct: 21  LNLSGMDLSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSANQLNALPEA 80

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
            GNL +L  L+L+ N++ ++PE++     L   ++    L++LP+    +LTS+  + L+
Sbjct: 81  FGNLTSLRYLKLNNNQINALPESIGNLTSLTSLDLSANQLNALPEAF-GNLTSLTFLDLN 139

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV---NMKDNLLTSLPL 397
            N  T  P       TS+  +   +NQ+  +P      A NL+ +   ++ +N L +LP 
Sbjct: 140 SNPLTGLPDS-VGNLTSLKHLYLNNNQLKALP----DSAGNLTSLTFLDLSENQLNALPE 194

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
             G    LT L L  NQI+ L E I NL NL  L L NN L  LP SI NL  L  L L 
Sbjct: 195 AFGNLSSLTYLYLSGNQINALPESIGNLTNLRYLYLWNNQLNTLPESIVNLTNLTDLYLS 254

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
           EN+L +LP   G L  L  L L  NQL +LP   G+L++L+YL +  N L  +PE IG L
Sbjct: 255 ENQLNALPETFGNLSSLTDLYLSGNQLNALPETFGNLSSLTYLYLNSNQLTGLPESIGQL 314

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI----VVGGPSL-IIRY 572
             L  L L DN  L  +P EL   + L+ + + N  L ++P E+        P    IR 
Sbjct: 315 NKLKELILYDNKLL-TLPQELTKLTQLKKLDIRNNDLGELPPEVKRKYTQPAPVFNFIRQ 373

Query: 573 LKMQGPYR 580
           L+ +G  R
Sbjct: 374 LQEEGSER 381



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 124/372 (33%), Positives = 194/372 (52%), Gaps = 26/372 (6%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE 156
           +  +E    L+LS   ++ LP  +  LT L +LYL  N+L++LP   G +T+LT L L+ 
Sbjct: 12  QAAKEQWKELNLSGMDLSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSA 71

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N L +LP++  NL  LR L L +N++N LP  +  LTSL  L L  N++  +      L+
Sbjct: 72  NQLNALPEAFGNLTSLRYLKLNNNQINALPESIGNLTSLTSLDLSANQLNALPEAFGNLT 131

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           +L+ L +  N +  LP  +G L +L  L L +N L+ LP   GN T L  LDL  N+L  
Sbjct: 132 SLTFLDLNSNPLTGLPDSVGNLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDLSENQLNA 191

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P+  GNL +LT L LS N++ ++PE++    +L    +    L++LP+ ++ +LT++ +
Sbjct: 192 LPEAFGNLSSLTYLYLSGNQINALPESIGNLTNLRYLYLWNNQLNTLPESIV-NLTNLTD 250

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + LS N+  A P                           F    +L+ + +  N L +LP
Sbjct: 251 LYLSENQLNALPE-------------------------TFGNLSSLTDLYLSGNQLNALP 285

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
              G    LT L L +NQ++ L E I  L  L+ L+L +N L  LP  +  L +LK LD+
Sbjct: 286 ETFGNLSSLTYLYLNSNQLTGLPESIGQLNKLKELILYDNKLLTLPQELTKLTQLKKLDI 345

Query: 457 EENKLESLPNEI 468
             N L  LP E+
Sbjct: 346 RNNDLGELPPEV 357



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/175 (38%), Positives = 99/175 (56%), Gaps = 1/175 (0%)

Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
           ++N+    L+ LP ++G    LT+L L  NQ+S L E   NL +L  L LS N L  LP 
Sbjct: 20  ELNLSGMDLSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSANQLNALPE 79

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
           + GNL  L+ L L  N++ +LP  IG L  L  L L +NQL +LP A G+LT+L++L + 
Sbjct: 80  AFGNLTSLRYLKLNNNQINALPESIGNLTSLTSLDLSANQLNALPEAFGNLTSLTFLDLN 139

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            N L  +P+ +G L +L  LYLN+N  L  +P      ++L  + L    L+ +P
Sbjct: 140 SNPLTGLPDSVGNLTSLKHLYLNNNQ-LKALPDSAGNLTSLTFLDLSENQLNALP 193



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 1/109 (0%)

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
           + K L+L    L  LP+EIG L  L  L L  NQL +LP A G+LT+L++L +  N L +
Sbjct: 17  QWKELNLSGMDLSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSANQLNA 76

Query: 510 IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           +PE  G L +L  L LN+N  +N +P  +   ++L  + L    L+ +P
Sbjct: 77  LPEAFGNLTSLRYLKLNNNQ-INALPESIGNLTSLTSLDLSANQLNALP 124



 Score = 45.4 bits (106), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)

Query: 472 KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
           ++ + L L    L  LP  IG+LT+L+ L +  N L ++PE  G L +L  LYL+ N  L
Sbjct: 16  EQWKELNLSGMDLSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSANQ-L 74

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N +P      ++L+ + L+N  ++ +P  I
Sbjct: 75  NALPEAFGNLTSLRYLKLNNNQINALPESI 104


>gi|417406386|gb|JAA49853.1| Putative cytoskeletal regulator flightless-i [Desmodus rotundus]
          Length = 1369

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 142/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                                     ++F  N I+ +  GI S  +NL  + +  N L  
Sbjct: 233 T------------------------YLDFSKNNIEMVEEGI-SACENLQDLILSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  LV++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 158/310 (50%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L  LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L    N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDFSKNNIEMVEEGISACENLQDLILSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 114/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L  L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  + N  +  +   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDFSKNN-IEMVEEGISACENLQDLILSSNSLQQLPETI 272


>gi|322785453|gb|EFZ12124.1| hypothetical protein SINV_08215 [Solenopsis invicta]
          Length = 1015

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 222/466 (47%), Gaps = 50/466 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE+I  L L+  ++  +PP V      LE+LYL  N++  LP  +     L  L L
Sbjct: 12  LRAQEEDICELQLNHCNLYDVPPDVFIYERTLEKLYLDANRIRDLPRPLFQCHELRVLSL 71

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           ++N +T+LP ++A+L  L  L+L  N + +LP  + +  SL+ + +  N        I +
Sbjct: 72  SDNEITTLPPAIASLINLEYLELSKNSIKDLPDSIKECKSLRSIDISVNPFDRFPDAITH 131

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           +  L  L + D  I  LP   G L  L TL+L  N++  LPK +     L  LD+ +N+ 
Sbjct: 132 IVGLRELYLNDAYIEYLPANFGRLSALRTLELRENNMMTLPKSMSRLVNLQRLDIGNNDF 191

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+++G+LINLT L +  N +  VP  + +   LN F+   C +              
Sbjct: 192 TELPEVVGDLINLTELWIDGNDIRRVPANVEQLYRLNHFD---CTM-------------- 234

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                                          N I  +P  I    ++++ +N+  N +  
Sbjct: 235 -------------------------------NAIHALPMEIRG-WRDIAIMNLSSNEMYE 262

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  L     +  L +  NQ++ L  DI  + +LE L+++ N ++ LPSSIG LRKL CL
Sbjct: 263 LPDTLCYLRTIVTLKIDDNQLNALPNDIGQMSSLEELIITKNFIEYLPSSIGLLRKLHCL 322

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           + + N L +LP EIG    L  L L+SN L  +P  +GHL++L  L++  N ++ +P  +
Sbjct: 323 NADNNYLRALPAEIGSCTSLSLLSLRSNNLSRVPPELGHLSSLRVLNLVNNAIKFLPVSM 382

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
             L NL  L+L+DN     +P +        +M L    L Q P +
Sbjct: 383 LNLSNLKALWLSDNQSQPLVPLQQEFNCEEDMMVLSCFMLPQKPRQ 428


>gi|432853398|ref|XP_004067687.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Oryzias
           latipes]
          Length = 595

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 151/518 (29%), Positives = 252/518 (48%), Gaps = 67/518 (12%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LDL  + +  L  ++ +L  L+ L L  N+L+SLP ++  + NL  L L +N L +L
Sbjct: 102 LVTLDLHDNQLNTLHSAIGELQELQTLRLSHNQLSSLPVEVCMLRNLRSLTLQQNLLENL 161

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+    L+ L  LDL  N+L +LP  + +LT L+ + L  N++  +   +  L+N+ +L 
Sbjct: 162 PEEFGQLENLTELDLSKNRLTDLPQSLGRLTGLQKISLSHNKLSCLPDCLSQLTNVKLLD 221

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPK---------EIGN------------C 261
             +N++ ++P  L  + +L  L L HN L+ LP+          +GN            C
Sbjct: 222 CSNNQLSDVPASLAHMLSLEQLHLRHNRLQRLPQLHAPALKELYVGNNQVGVLEAEQLEC 281

Query: 262 TMLVT-LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              ++ L+L+ N++  +P+ +  L  LTRL L+ N + S+P +LS   +L    VEG  L
Sbjct: 282 LKAISVLELRDNKIRAVPEQMSLLHTLTRLDLTNNDIGSLPASLSLLPNLKVLLVEGNPL 341

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGG---PTQFT-------SVYSI------NFE 364
             +   LL+  T+   +   R +    P      PT  T       +V+SI      +  
Sbjct: 342 RGIRRDLLTKGTN-ELLKYLRGRVKEEPESSEDPPTAMTFPSQARINVHSIKTLGVLDQS 400

Query: 365 HNQIDKIPYGIF--SRAKNLSKVNMKDNLLTSLPLDL-GTWVGLTELNLGTNQISKLSED 421
             Q+D IP   F  +  +N+   N   N LTS+P  L      LTELNLG NQ+     +
Sbjct: 401 DMQVDSIPDEAFLAAEGQNVVTANFSKNKLTSIPARLLQLSSSLTELNLGFNQLDHCGVE 460

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           +  L+ L  L L NN LK LP+ + NL KL+C+ L  N+ +S P  +  +  ++ +++ +
Sbjct: 461 VCRLLQLTHLDLRNNQLKDLPADMENLAKLRCIILSYNRFKSFPEVLYQMFSMETVLMAN 520

Query: 482 NQLVSL-PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELAL 540
           NQ+ S+ P  +  L +LS L +  N+L SIP E+G                        L
Sbjct: 521 NQVSSVDPARLARLEHLSTLDLSNNDLLSIPPELG------------------------L 556

Query: 541 CSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGP 578
           C++L+ +SL   P     + IV  G   ++ YL+ + P
Sbjct: 557 CTSLRSLSLQGNPFRTPRAAIVAKGTDAVLEYLRSRIP 594



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 241/544 (44%), Gaps = 79/544 (14%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS  ++T +P SV ++   EE     +  AS   +    T+LT L L+ N ++ + + 
Sbjct: 40  LNLSGRALTKVPQSVYRVN--EEAQQNVSFGAS--DRWWEQTDLTKLLLSSNQISQISED 95

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L  LDL  N+LN L   + +L  L+ L L  N++ ++  ++  L NL  L+++ 
Sbjct: 96  IRLLPALVTLDLHDNQLNTLHSAIGELQELQTLRLSHNQLSSLPVEVCMLRNLRSLTLQQ 155

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N +  LP E G+L+NL  LDL+ N L +LP+ +G  T L  + L HN+L  +PD L  L 
Sbjct: 156 NLLENLPEEFGQLENLTELDLSKNRLTDLPQSLGRLTGLQKISLSHNKLSCLPDCLSQLT 215

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           N+  L  S N+L  VP +L+  + L + ++    L  LP        ++  + +  N+  
Sbjct: 216 NVKLLDCSNNQLSDVPASLAHMLSLEQLHLRHNRLQRLPQ---LHAPALKELYVGNNQVG 272

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
              +       ++  +    N+I  +P  + S    L+++++ +N + SLP  L     L
Sbjct: 273 VLEAEQLECLKAISVLELRDNKIRAVPEQM-SLLHTLTRLDLTNNDIGSLPASLSLLPNL 331

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS-----------------IGNL 448
             L +  N +  +  D+      E+L      +K+ P S                 + ++
Sbjct: 332 KVLLVEGNPLRGIRRDLLTKGTNELLKYLRGRVKEEPESSEDPPTAMTFPSQARINVHSI 391

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLI---LQSNQLVSLPRAIGHL-TNLSYLSVGE 504
           + L  LD  + +++S+P+E     E Q ++      N+L S+P  +  L ++L+ L++G 
Sbjct: 392 KTLGVLDQSDMQVDSIPDEAFLAAEGQNVVTANFSKNKLTSIPARLLQLSSSLTELNLGF 451

Query: 505 NNL----------------------------------------------QSIPEEIGTLE 518
           N L                                              +S PE +  + 
Sbjct: 452 NQLDHCGVEVCRLLQLTHLDLRNNQLKDLPADMENLAKLRCIILSYNRFKSFPEVLYQMF 511

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQG- 577
           ++ T+ + +N   +  P  LA   +L  + L N  L  IP E+   G    +R L +QG 
Sbjct: 512 SMETVLMANNQVSSVDPARLARLEHLSTLDLSNNDLLSIPPEL---GLCTSLRSLSLQGN 568

Query: 578 PYRT 581
           P+RT
Sbjct: 569 PFRT 572



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 69/212 (32%)

Query: 85  IQADLNIEKEFLRCKEENILNLDLSKSSITHLPP------------------------SV 120
           +Q D   ++ FL  + +N++  + SK+ +T +P                          V
Sbjct: 402 MQVDSIPDEAFLAAEGQNVVTANFSKNKLTSIPARLLQLSSSLTELNLGFNQLDHCGVEV 461

Query: 121 EKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHN 180
            +L  L  L L  N+L  LP+                        + NL +LR + L +N
Sbjct: 462 CRLLQLTHLDLRNNQLKDLPA-----------------------DMENLAKLRCIILSYN 498

Query: 181 KLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKN 240
           +    P V+Y++ S++ + +  N++ +V                       P  L  L++
Sbjct: 499 RFKSFPEVLYQMFSMETVLMANNQVSSVD----------------------PARLARLEH 536

Query: 241 LVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
           L TLDL++N L  +P E+G CT L +L LQ N
Sbjct: 537 LSTLDLSNNDLLSIPPELGLCTSLRSLSLQGN 568



 Score = 47.0 bits (110), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 1/116 (0%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C+   + +LDL  + +  LP  +E L  L  + L  N+  S P  +  + ++  + +A N
Sbjct: 462 CRLLQLTHLDLRNNQLKDLPADMENLAKLRCIILSYNRFKSFPEVLYQMFSMETVLMANN 521

Query: 158 SLTSL-PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
            ++S+ P  LA L+ L  LDL +N L  +P  +   TSL+ L L+ N  +T    I
Sbjct: 522 QVSSVDPARLARLEHLSTLDLSNNDLLSIPPELGLCTSLRSLSLQGNPFRTPRAAI 577


>gi|359727309|ref|ZP_09266005.1| hypothetical protein Lwei2_10285 [Leptospira weilii str.
           2006001855]
          Length = 455

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 140/374 (37%), Positives = 206/374 (55%), Gaps = 6/374 (1%)

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           + E   T L ++L N   +RVL+L +  L   P  + K  +LK L L  N  KT+  +I 
Sbjct: 35  IEEGIYTDLNEALKNPTDVRVLNLSYRYLTTFPKGIEKFQNLKHLDLSENFFKTLPQEIG 94

Query: 214 YLSNLSML--SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
            L NL  L  S  +N I +LP E+G L+NL  L+L+ N L  LP+EI     L  L+L  
Sbjct: 95  RLQNLQELNLSFNNNPI-DLPQEIGRLQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSS 153

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           N L+++P  +G L NL +L LS NRL ++P+ + +   L   +V    L+ LP  +   L
Sbjct: 154 NYLIDLPQEIGRLQNLEQLNLSGNRLTTLPQEIGQLKKLEWLHVNHNRLTVLPKEI-GQL 212

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
            ++  + L  N  T  P     Q      +    NQ+  +P G+  + +NL ++ +  N 
Sbjct: 213 QNLKELLLYDNSLTTLPEE-IGQLQKFKQLVLHENQLTTLPQGL-CKLQNLERIYLHQNR 270

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           LTSLP ++G    L EL+L +NQ+  L ++I+ L NL++L L+NN L  LP  IG L+ L
Sbjct: 271 LTSLPQEIGQLQNLQELHLSSNQLKTLPKEIEKLHNLQILNLNNNELTALPKEIGQLQNL 330

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
             L+L+ NKL  LP EIG L+ ++ L L  NQL +LP  IG L  L  L++  N+L S P
Sbjct: 331 YGLNLKLNKLTILPKEIGQLQNMRDLDLSDNQLTTLPSEIGQLKKLHSLNLSGNSLTSFP 390

Query: 512 EEIGTLENLHTLYL 525
           +EIG L+NL  L L
Sbjct: 391 KEIGKLQNLKFLRL 404



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 128/377 (33%), Positives = 194/377 (51%), Gaps = 27/377 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLA-ENSLTSLPD 164
           L+LS   +T  P  +EK  +L+ L L  N   +LP +IG + NL  L L+  N+   LP 
Sbjct: 56  LNLSYRYLTTFPKGIEKFQNLKHLDLSENFFKTLPQEIGRLQNLQELNLSFNNNPIDLPQ 115

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            +  LQ L  L+L  N+L  LP  +++                       L NL  L++ 
Sbjct: 116 EIGRLQNLERLNLSGNRLTTLPQEIWR-----------------------LQNLQELNLS 152

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
            N + +LP E+G L+NL  L+L+ N L  LP+EIG    L  L + HN L  +P  +G L
Sbjct: 153 SNYLIDLPQEIGRLQNLEQLNLSGNRLTTLPQEIGQLKKLEWLHVNHNRLTVLPKEIGQL 212

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
            NL  L L  N L ++PE + +     +  +    L++LP G L  L ++  I L +N+ 
Sbjct: 213 QNLKELLLYDNSLTTLPEEIGQLQKFKQLVLHENQLTTLPQG-LCKLQNLERIYLHQNRL 271

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
           T+ P     Q  ++  ++   NQ+  +P  I  +  NL  +N+ +N LT+LP ++G    
Sbjct: 272 TSLPQ-EIGQLQNLQELHLSSNQLKTLPKEI-EKLHNLQILNLNNNELTALPKEIGQLQN 329

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L  LNL  N+++ L ++I  L N+  L LS+N L  LPS IG L+KL  L+L  N L S 
Sbjct: 330 LYGLNLKLNKLTILPKEIGQLQNMRDLDLSDNQLTTLPSEIGQLKKLHSLNLSGNSLTSF 389

Query: 465 PNEIGFLKELQRLILQS 481
           P EIG L+ L+ L L+ 
Sbjct: 390 PKEIGKLQNLKFLRLRG 406



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 121/363 (33%), Positives = 199/363 (54%), Gaps = 8/363 (2%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ-HNEL 274
           +++ +L++    +   P  + + +NL  LDL+ N  + LP+EIG    L  L+L  +N  
Sbjct: 51  TDVRVLNLSYRYLTTFPKGIEKFQNLKHLDLSENFFKTLPQEIGRLQNLQELNLSFNNNP 110

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           +++P  +G L NL RL LS NRL ++P+ + +  +L E N+    L  LP  +   L ++
Sbjct: 111 IDLPQEIGRLQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQEI-GRLQNL 169

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + LS N+ T  P     Q   +  ++  HN++  +P  I  + +NL ++ + DN LT+
Sbjct: 170 EQLNLSGNRLTTLPQE-IGQLKKLEWLHVNHNRLTVLPKEI-GQLQNLKELLLYDNSLTT 227

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP ++G      +L L  NQ++ L + +  L NLE + L  N L  LP  IG L+ L+ L
Sbjct: 228 LPEEIGQLQKFKQLVLHENQLTTLPQGLCKLQNLERIYLHQNRLTSLPQEIGQLQNLQEL 287

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            L  N+L++LP EI  L  LQ L L +N+L +LP+ IG L NL  L++  N L  +P+EI
Sbjct: 288 HLSSNQLKTLPKEIEKLHNLQILNLNNNELTALPKEIGQLQNLYGLNLKLNKLTILPKEI 347

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
           G L+N+  L L+DN  L  +P E+     L  ++L    L+  P EI   G    +++L+
Sbjct: 348 GQLQNMRDLDLSDNQ-LTTLPSEIGQLKKLHSLNLSGNSLTSFPKEI---GKLQNLKFLR 403

Query: 575 MQG 577
           ++G
Sbjct: 404 LRG 406



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 194/404 (48%), Gaps = 44/404 (10%)

Query: 93  KEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCL 152
           +E  R +    LNL  + + I  LP  + +L +LE L L GN+L +LP +I  + NL  L
Sbjct: 91  QEIGRLQNLQELNLSFNNNPID-LPQEIGRLQNLERLNLSGNRLTTLPQEIWRLQNLQEL 149

Query: 153 GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
            L+ N L  LP  +  LQ L  L+L  N+L  LP  + +L  L+ L++  NR+  +  +I
Sbjct: 150 NLSSNYLIDLPQEIGRLQNLEQLNLSGNRLTTLPQEIGQLKKLEWLHVNHNRLTVLPKEI 209

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L NL  L + DN +  LP E+G+L+    L L  N L  LP+ +     L  + L  N
Sbjct: 210 GQLQNLKELLLYDNSLTTLPEEIGQLQKFKQLVLHENQLTTLPQGLCKLQNLERIYLHQN 269

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
            L ++P  +G L NL  L LS N+L+++P+ + K  +L   N+    L++LP  +     
Sbjct: 270 RLTSLPQEIGQLQNLQELHLSSNQLKTLPKEIEKLHNLQILNLNNNELTALPKEI----- 324

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
                                Q  ++Y +N + N++  +P  I  + +N+  +++ DN L
Sbjct: 325 --------------------GQLQNLYGLNLKLNKLTILPKEI-GQLQNMRDLDLSDNQL 363

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
           T+LP ++G    L  LNL  N ++   ++I  L NL+ L      L+ +P  I    K++
Sbjct: 364 TTLPSEIGQLKKLHSLNLSGNSLTSFPKEIGKLQNLKFLR-----LRGIPDLIPQKEKIR 418

Query: 453 CLDLEENKLESLPNEI---GFLKELQRLILQSNQLVSLPRAIGH 493
            L         +PN I   G   +L+R   QS Q  S  R   H
Sbjct: 419 KL---------VPNAIMDFGEGPKLKRRTTQSRQRKSQNRRENH 453



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 146/262 (55%), Gaps = 7/262 (2%)

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINN 336
           + L N  ++  L LSY  L + P+ + K  +L   ++      +LP   G L +L  +N 
Sbjct: 45  EALKNPTDVRVLNLSYRYLTTFPKGIEKFQNLKHLDLSENFFKTLPQEIGRLQNLQELN- 103

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           ++ + N        G  Q  ++  +N   N++  +P  I+ R +NL ++N+  N L  LP
Sbjct: 104 LSFNNNPIDLPQEIGRLQ--NLERLNLSGNRLTTLPQEIW-RLQNLQELNLSSNYLIDLP 160

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L +LNL  N+++ L ++I  L  LE L +++N L  LP  IG L+ LK L L
Sbjct: 161 QEIGRLQNLEQLNLSGNRLTTLPQEIGQLKKLEWLHVNHNRLTVLPKEIGQLQNLKELLL 220

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
            +N L +LP EIG L++ ++L+L  NQL +LP+ +  L NL  + + +N L S+P+EIG 
Sbjct: 221 YDNSLTTLPEEIGQLQKFKQLVLHENQLTTLPQGLCKLQNLERIYLHQNRLTSLPQEIGQ 280

Query: 517 LENLHTLYLNDNTCLNNIPFEL 538
           L+NL  L+L+ N  L  +P E+
Sbjct: 281 LQNLQELHLSSNQ-LKTLPKEI 301


>gi|45657382|ref|YP_001468.1| hypothetical protein LIC11507 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600621|gb|AAS70105.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 500

 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 148/434 (34%), Positives = 233/434 (53%), Gaps = 11/434 (2%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS+      P  + +L +LE L L  N++  LP +I  + NL  L L  N LT 
Sbjct: 50  NVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTI 109

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  +  L+ L +L L +N+++ LP  + K  +L+ L LR NR+ T+   I  L  L  L
Sbjct: 110 VPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEEL 169

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++ +N+I+ LP E+G L+NL   +L+ N L  +PKEIGN   L  L L++N+L  +P  +
Sbjct: 170 NLENNRIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQM 229

Query: 282 GNLINLTRLRLSYNRL-----ESVPETLSKC-VHLNEFNVEGCALSSLPDGLLSSLTSIN 335
             L +L  L L  N L     + +   L  C + L +   EG    +L   L   L  I 
Sbjct: 230 EKLQDLEVLNLLINPLLSKERKKIQALLPDCDIDLRDVE-EGETYRNLNLALEQPL-KIL 287

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
           +++L   +F  + S    +  ++ S++     +  +P  I  R K+L  +++  N L SL
Sbjct: 288 SLSLEYQQFPLF-SKEILRLKNLRSLSLYDTSLVALPKEIV-RLKHLEHLSLGLNQLKSL 345

Query: 396 PLDLGTWVGLTELNLGT-NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           P ++G    L  L++G  N+   L ++I  L NL  L+L+ N  K  P  I  L+KL  L
Sbjct: 346 PKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVIL 405

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           ++  N+L++LP +IG LK LQ L L  N+L +LP  IG L NL+ L +  N ++++PEEI
Sbjct: 406 NVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEI 465

Query: 515 GTLENLHTLYLNDN 528
             L+NL  L L +N
Sbjct: 466 ARLQNLRKLTLYEN 479



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 151/433 (34%), Positives = 224/433 (51%), Gaps = 24/433 (5%)

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           K A  P +I  +  L  L L EN +T LP  +  L+ L+ L L  NKL  +P  +++L +
Sbjct: 60  KFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKEIWELEN 119

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L IL L  NRI T+  +I+   NL  L +R N++  LP  +GELK L  L+L +N ++ L
Sbjct: 120 LTILRLENNRISTLPKEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEELNLENNRIKIL 179

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           PKEIG    L   +L  N+L +IP  +GNL NL  L L  N+L+++P  + K   L   N
Sbjct: 180 PKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLN 239

Query: 315 VEGCALSSLPDGLLSSLTSINNITLS--------RNKFTAYPSGGPTQFTSVYSINFEHN 366
           +    L S     + +L    +I L         RN   A       Q   + S++ E+ 
Sbjct: 240 LLINPLLSKERKKIQALLPDCDIDLRDVEEGETYRNLNLAL-----EQPLKILSLSLEYQ 294

Query: 367 QIDKIPYGIFS----RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
           Q     + +FS    R KNL  +++ D  L +LP ++     L  L+LG NQ+  L ++I
Sbjct: 295 Q-----FPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEI 349

Query: 423 QNLVNLEVL-VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
             L NL  L + +NN  + LP  I  L+ L+ L L +N+ +  P EI  LK+L  L + +
Sbjct: 350 GLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNT 409

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           NQL +LP  IG L  L  L +  N L ++P EIG L NL  LYL  N  +  +P E+A  
Sbjct: 410 NQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNR-IKTLPEEIARL 468

Query: 542 SNLQIMSLDNCPL 554
            NL+ ++L   P+
Sbjct: 469 QNLRKLTLYENPI 481



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 183/399 (45%), Gaps = 58/399 (14%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
           SN+ +L +   K    P E+ EL+ L  L L  N +  LP+EI     L  L L  N+L 
Sbjct: 49  SNVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLT 108

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL-------- 327
            +P  +  L NLT LRL  NR+ ++P+ + K  +L E ++ G  L +LP+G+        
Sbjct: 109 IVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEE 168

Query: 328 --------------LSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKI 371
                         + +L ++    LS NK  + P   G       +Y    E+NQ+  +
Sbjct: 169 LNLENNRIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLY---LENNQLKTL 225

Query: 372 PYGIFSRAKNLSKVNMKDNLLTS----------------------------LPLDLGTWV 403
           P  +  + ++L  +N+  N L S                            L L L   +
Sbjct: 226 PRQM-EKLQDLEVLNLLINPLLSKERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPL 284

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            +  L+L   Q    S++I  L NL  L L +  L  LP  I  L+ L+ L L  N+L+S
Sbjct: 285 KILSLSLEYQQFPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKS 344

Query: 464 LPNEIGFLKELQRL-ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
           LP EIG L+ L+ L I  +N+   LP+ I  L NL  L + +N  +  P+EI  L+ L  
Sbjct: 345 LPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVI 404

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L +N N  L+ +P ++     LQ++ L +  L+ +PSEI
Sbjct: 405 LNVNTNQ-LDALPEKIGRLKGLQMLDLSHNRLTTLPSEI 442



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 162/367 (44%), Gaps = 82/367 (22%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLAS---------------------- 138
           EN+  L L  + I+ LP  +EK  +L+EL L GN+L +                      
Sbjct: 118 ENLTILRLENNRISTLPKEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEELNLENNRIK 177

Query: 139 -LPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
            LP +IG + NL    L+ N L S+P  + NLQ LR+L L +N+L  LP  + KL  L++
Sbjct: 178 ILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 237

Query: 198 LYLRFN--------RIKTVHPD-------------------------------------- 211
           L L  N        +I+ + PD                                      
Sbjct: 238 LNLLINPLLSKERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFP 297

Query: 212 -----IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
                I  L NL  LS+ D  +  LP E+  LK+L  L L  N L+ LPKEIG    L +
Sbjct: 298 LFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRS 357

Query: 267 LDL-QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
           LD+  +NE   +P  +  L NL  L L+ NR +  P+ + +   L   NV    L +LP+
Sbjct: 358 LDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPE 417

Query: 326 GLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
             +  L  +  + LS N+ T  PS  G     T +Y    ++N+I  +P  I +R +NL 
Sbjct: 418 K-IGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELY---LQYNRIKTLPEEI-ARLQNLR 472

Query: 384 KVNMKDN 390
           K+ + +N
Sbjct: 473 KLTLYEN 479



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 189/421 (44%), Gaps = 80/421 (19%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKL-----------------------ASLPSQ 142
           L L ++ IT LP  + KL +L+ELYL GNKL                       ++LP +
Sbjct: 77  LKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLENNRISTLPKE 136

Query: 143 IGYVTNLTCLGLAENSLTSLPDSLAN-----------------------LQQLRVLDLRH 179
           I    NL  L L  N L +LP+ +                         L+ L + +L  
Sbjct: 137 IEKSKNLQELDLRGNRLVTLPEGIGELKLLEELNLENNRIKILPKEIGALENLWIFNLSG 196

Query: 180 NKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDN--------KIREL 231
           NKL  +P  +  L +L++LYL  N++KT+   ++ L +L +L++  N        KI+ L
Sbjct: 197 NKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQAL 256

Query: 232 PP---------ELGE-LKNL----------VTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
            P         E GE  +NL          ++L L +       KEI     L +L L  
Sbjct: 257 LPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFPLFSKEILRLKNLRSLSLYD 316

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG-CALSSLPDGLLSS 330
             LV +P  +  L +L  L L  N+L+S+P+ +    +L   ++        LP   ++ 
Sbjct: 317 TSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKE-IAR 375

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           L ++ ++ L++N+F  +P     +   +  +N   NQ+D +P  I  R K L  +++  N
Sbjct: 376 LQNLRSLLLNQNRFKIFPK-EIWELKKLVILNVNTNQLDALPEKI-GRLKGLQMLDLSHN 433

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            LT+LP ++G    LTEL L  N+I  L E+I  L NL  L L  N +   P  +  +RK
Sbjct: 434 RLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYENPIP--PQELDKIRK 491

Query: 451 L 451
           L
Sbjct: 492 L 492


>gi|417406440|gb|JAA49878.1| Putative cytoskeletal regulator flightless-i [Desmodus rotundus]
          Length = 1417

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 212/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                                   Y ++F  N I+ +  GI S  +NL  + +  N L  
Sbjct: 233 -----------------------TY-LDFSKNNIEMVEEGI-SACENLQDLILSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  LV++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 158/310 (50%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L  LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L    N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDFSKNNIEMVEEGISACENLQDLILSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 114/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L  L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  + N  +  +   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDFSKNN-IEMVEEGISACENLQDLILSSNSLQQLPETI 272


>gi|393912071|gb|EJD76579.1| leucine-rich repeat-containing protein 1 [Loa loa]
          Length = 1426

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 124/390 (31%), Positives = 207/390 (53%), Gaps = 5/390 (1%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F  C  + +  LD  + ++  +P  +++    LEE+YL  N +  L   +     L  L 
Sbjct: 8   FFACNRQ-VDMLDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILS 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L+EN +  LP  +A+L  L  L+L+ N +++LP  +     LKIL L  N I  + P I 
Sbjct: 67  LSENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPPTIS 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L++++ L + D  + ++P ++G+L+NL +L++  N L  +P  I     L  LDL HNE
Sbjct: 127 QLTSMTSLGLNDISLTQMPHDIGQLRNLRSLEVRENLLRTVPPSISQLKQLRRLDLGHNE 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L ++P+ +  L NL  L +  N LE++PE++ +C  L + +V    L  LPD  +  L  
Sbjct: 187 LDDLPNEISMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMLLPDE-IGDLEK 245

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           ++++T+S+N     PS    +   +  +  + N I ++   I S    L+++ + +NLLT
Sbjct: 246 LDDLTVSQNCLQVLPS-SIGRLKKLSMLKADRNAITQLTPAIGS-CHALTEIYLTENLLT 303

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            +P  LG    L  LNL  NQ+ +L   I    +L VL L +NL+++LP  IG L  L+ 
Sbjct: 304 EIPSSLGNLKSLRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEIGRLENLRV 363

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           LD+  N+L  LP  +  L +L+ L L  NQ
Sbjct: 364 LDVCNNRLNYLPFTVNVLFKLRALWLSENQ 393



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 197/375 (52%), Gaps = 28/375 (7%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           +++K   RC++  IL+L  S++ +  LP  +  LT+LEEL L GN ++ LP +I     L
Sbjct: 51  DLDKPLFRCRKLKILSL--SENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQL 108

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
             L L+ N +T LP +++ L  +  L L    L ++P  + +L +L+ L +R N ++TV 
Sbjct: 109 KILDLSSNPITRLPPTISQLTSMTSLGLNDISLTQMPHDIGQLRNLRSLEVRENLLRTVP 168

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
           P I  L  L  L +  N++ +LP E+  L+NL  L +  N LE LP+ I  C  L  LD+
Sbjct: 169 PSISQLKQLRRLDLGHNELDDLPNEISMLENLEELYVDQNDLEALPESIVQCRSLEQLDV 228

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
             N+L+ +PD +G+L  L  L +S N L+ +P ++ +   L+    +  A++ L    + 
Sbjct: 229 SENKLMLLPDEIGDLEKLDDLTVSQNCLQVLPSSIGRLKKLSMLKADRNAITQLTPA-IG 287

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
           S  ++  I L+ N  T  PS       S+ ++N + NQ+ ++P  I     +LS ++++D
Sbjct: 288 SCHALTEIYLTENLLTEIPSSL-GNLKSLRTLNLDKNQLKELPPTIGG-CTSLSVLSLRD 345

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
           NL+  LPL++G                        L NL VL + NN L  LP ++  L 
Sbjct: 346 NLIEQLPLEIG-----------------------RLENLRVLDVCNNRLNYLPFTVNVLF 382

Query: 450 KLKCLDLEENKLESL 464
           KL+ L L EN+ +++
Sbjct: 383 KLRALWLSENQSQAM 397



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 194/395 (49%), Gaps = 28/395 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYK-LTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+ +LD R   L  +P  + +   +L+ +YL  N IK +   +     L +LS+ +N++
Sbjct: 13  RQVDMLDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEV 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LP ++  L  L  L+L  N + +LP+EI NC  L  LDL  N +  +P  +  L ++T
Sbjct: 73  IRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPPTISQLTSMT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L  +P  + +  +L    V    L ++P  +                     
Sbjct: 133 SLGLNDISLTQMPHDIGQLRNLRSLEVRENLLRTVPPSI--------------------- 171

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
               +Q   +  ++  HN++D +P  I S  +NL ++ +  N L +LP  +     L +L
Sbjct: 172 ----SQLKQLRRLDLGHNELDDLPNEI-SMLENLEELYVDQNDLEALPESIVQCRSLEQL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++  L ++I +L  L+ L +S N L+ LPSSIG L+KL  L  + N +  L   I
Sbjct: 227 DVSENKLMLLPDEIGDLEKLDDLTVSQNCLQVLPSSIGRLKKLSMLKADRNAITQLTPAI 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G    L  + L  N L  +P ++G+L +L  L++ +N L+ +P  IG   +L  L L DN
Sbjct: 287 GSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKELPPTIGGCTSLSVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVV 563
             +  +P E+    NL+++ + N  L+ +P  + V
Sbjct: 347 -LIEQLPLEIGRLENLRVLDVCNNRLNYLPFTVNV 380



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 169/349 (48%), Gaps = 30/349 (8%)

Query: 218 LSMLSMRDNKIRELPPELGE-LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           + ML  R   ++ +P ++    + L  + L  NH+++L K +  C  L  L L  NE++ 
Sbjct: 15  VDMLDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEVIR 74

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  + +L  L  L L  N +  +PE +  C+ L   ++    ++ LP  +         
Sbjct: 75  LPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPPTI--------- 125

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
                           +Q TS+ S+      + ++P+ I  + +NL  + +++NLL ++P
Sbjct: 126 ----------------SQLTSMTSLGLNDISLTQMPHDI-GQLRNLRSLEVRENLLRTVP 168

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +     L  L+LG N++  L  +I  L NLE L +  N L+ LP SI   R L+ LD+
Sbjct: 169 PSISQLKQLRRLDLGHNELDDLPNEISMLENLEELYVDQNDLEALPESIVQCRSLEQLDV 228

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
            ENKL  LP+EIG L++L  L +  N L  LP +IG L  LS L    N +  +   IG+
Sbjct: 229 SENKLMLLPDEIGDLEKLDDLTVSQNCLQVLPSSIGRLKKLSMLKADRNAITQLTPAIGS 288

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGG 565
              L  +YL +N  L  IP  L    +L+ ++LD   L ++P  I  GG
Sbjct: 289 CHALTEIYLTEN-LLTEIPSSLGNLKSLRTLNLDKNQLKELPPTI--GG 334


>gi|418680694|ref|ZP_13241938.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327638|gb|EJO79883.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
          Length = 351

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 119/310 (38%), Positives = 173/310 (55%), Gaps = 7/310 (2%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+ + LP E+G+LKNL  L+L  N L  LPKEIG    L  L+L  N++  IP  
Sbjct: 25  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 84

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNIT 338
           +  L  L  L L  N+L ++P+ + +   L    +    L++LP   G L +L S+N   
Sbjct: 85  IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLN--- 141

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           LS N+    P     +   + S+  ++NQ+  +P  I  + +NL  +++  N LT+LP +
Sbjct: 142 LSYNQIKTIPKK-IEKLQKLQSLGLDNNQLTTLPQEI-GQLQNLQSLDLSTNRLTTLPQE 199

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L +L L +NQ++ L  +I  L NL+ L L NN L  L   I  L+ LK LDL  
Sbjct: 200 IGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRS 259

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L + P EIG LK LQ L L SNQL +LP  IG L NL  L +  N L ++P+EIG L+
Sbjct: 260 NQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQ 319

Query: 519 NLHTLYLNDN 528
           NL  L+LN+N
Sbjct: 320 NLQELFLNNN 329



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/348 (34%), Positives = 183/348 (52%), Gaps = 26/348 (7%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N  ++R LDL  N+   LP  + KL +L+ L L  N++  +  +I  L NL  L
Sbjct: 12  LTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKL 71

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++  N+I+ +P E+ +L+ L +L L +N L  LP+EIG    L  L L  N+L  +P  +
Sbjct: 72  NLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI 131

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L LSYN+++++P+ + K   L    ++   L++LP  +   L ++ ++ LS 
Sbjct: 132 GQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEI-GQLQNLQSLDLST 190

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P                               +NL  + +  N LT LP ++G 
Sbjct: 191 NRLTTLPQE-------------------------IGHLQNLQDLYLVSNQLTILPNEIGQ 225

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  LNL  N+++ LS++I+ L NL+ L L +N L   P  IG L+ L+ LDL  N+L
Sbjct: 226 LKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQL 285

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            +LP  IG LK LQ L L SNQL +LP+ IG L NL  L +  N L S
Sbjct: 286 TTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 333



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 180/335 (53%), Gaps = 26/335 (7%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L  N+  +LP +IG + NL  L L +N LT LP  +  L+ LR L+L  N++  +P  
Sbjct: 25  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 84

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + KL  L+ LYL  N++ T+  +I  L  L  L +  N++  LP E+G+LKNL +L+L++
Sbjct: 85  IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 144

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N ++ +PK+I     L +L L +N+L  +P  +G L NL  L LS NRL ++P+ +    
Sbjct: 145 NQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 204

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L +  +    L+ LP+ +                          Q  ++ ++N  +N++
Sbjct: 205 NLQDLYLVSNQLTILPNEI-------------------------GQLKNLQTLNLRNNRL 239

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
             +   I  + +NL  ++++ N LT+ P ++G    L  L+LG+NQ++ L E I  L NL
Sbjct: 240 TTLSKEI-EQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNL 298

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           + L L +N L  LP  IG L+ L+ L L  N+L S
Sbjct: 299 QTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 333



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 174/311 (55%), Gaps = 3/311 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS +    LP  + KL +L+EL L  N+L  LP +IG + NL  L L+ N + ++P  
Sbjct: 25  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 84

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L+ L L +N+L  LP  + +L  L+ LYL  N++ T+  +I  L NL  L++  
Sbjct: 85  IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 144

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I+ +P ++ +L+ L +L L +N L  LP+EIG    L +LDL  N L  +P  +G+L 
Sbjct: 145 NQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 204

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L  +P  + +  +L   N+    L++L    +  L ++ ++ L  N+ T
Sbjct: 205 NLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKE-IEQLQNLKSLDLRSNQLT 263

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P     Q  ++  ++   NQ+  +P GI  + KNL  +++  N LT+LP ++G    L
Sbjct: 264 TFPK-EIGQLKNLQVLDLGSNQLTTLPEGI-GQLKNLQTLDLDSNQLTTLPQEIGQLQNL 321

Query: 406 TELNLGTNQIS 416
            EL L  NQ+S
Sbjct: 322 QELFLNNNQLS 332



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 173/326 (53%), Gaps = 25/326 (7%)

Query: 252 EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN 311
           ++L K + N   + TLDL  N    +P  +G L NL  L L+ N+L  +P+ + +  +L 
Sbjct: 10  QDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 69

Query: 312 EFNVEGCALSSLPDGL----------------------LSSLTSINNITLSRNKFTAYPS 349
           + N+    + ++P  +                      +  L  +  + L +N+ T  P 
Sbjct: 70  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ 129

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
               Q  ++ S+N  +NQI  IP  I  + + L  + + +N LT+LP ++G    L  L+
Sbjct: 130 -EIGQLKNLKSLNLSYNQIKTIPKKI-EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLD 187

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           L TN+++ L ++I +L NL+ L L +N L  LP+ IG L+ L+ L+L  N+L +L  EI 
Sbjct: 188 LSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIE 247

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            L+ L+ L L+SNQL + P+ IG L NL  L +G N L ++PE IG L+NL TL L+ N 
Sbjct: 248 QLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQ 307

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLS 555
            L  +P E+    NLQ + L+N  LS
Sbjct: 308 -LTTLPQEIGQLQNLQELFLNNNQLS 332



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 87/212 (41%), Positives = 126/212 (59%), Gaps = 5/212 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L+LS + I  +P  +EKL  L+ L L  N+L +LP +IG + NL  L L+ N LT
Sbjct: 135 KNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLT 194

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  + +LQ L+ L L  N+L  LP  + +L +L+ L LR NR+ T+  +I+ L NL  
Sbjct: 195 TLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKS 254

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +R N++   P E+G+LKNL  LDL  N L  LP+ IG    L TLDL  N+L  +P  
Sbjct: 255 LDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 314

Query: 281 LGNLINLTRLRLSYNRLES-----VPETLSKC 307
           +G L NL  L L+ N+L S     + + L KC
Sbjct: 315 IGQLQNLQELFLNNNQLSSQEKKRIRKLLPKC 346



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 139/249 (55%), Gaps = 1/249 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS + I  +P  +EKL  L+ LYL  N+L +LP +IG +  L  L L +N LT
Sbjct: 66  KNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT 125

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L+ L+L +N++  +P  + KL  L+ L L  N++ T+  +I  L NL  
Sbjct: 126 TLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQS 185

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G L+NL  L L  N L  LP EIG    L TL+L++N L  +   
Sbjct: 186 LDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKE 245

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  N+L + P+ + +  +L   ++    L++LP+G +  L ++  + L 
Sbjct: 246 IEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEG-IGQLKNLQTLDLD 304

Query: 341 RNKFTAYPS 349
            N+ T  P 
Sbjct: 305 SNQLTTLPQ 313



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 125/217 (57%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L K+ +T LP  + +L +L+ L L  N++ ++P +I  +  L  LGL  N LT+LP  
Sbjct: 117 LYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQE 176

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ LDL  N+L  LP  +  L +L+ LYL  N++  +  +I  L NL  L++R+
Sbjct: 177 IGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 236

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  L  E+ +L+NL +LDL  N L   PKEIG    L  LDL  N+L  +P+ +G L 
Sbjct: 237 NRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLK 296

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           NL  L L  N+L ++P+ + +  +L E  +    LSS
Sbjct: 297 NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 333



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 106/177 (59%), Gaps = 1/177 (0%)

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
           +++  N   +LP ++G    L ELNL  NQ++ L ++I  L NL  L LS N +K +P  
Sbjct: 25  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 84

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
           I  L+KL+ L L  N+L +LP EIG L++LQ L L  NQL +LP+ IG L NL  L++  
Sbjct: 85  IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 144

Query: 505 NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N +++IP++I  L+ L +L L DN  L  +P E+    NLQ + L    L+ +P EI
Sbjct: 145 NQIKTIPKKIEKLQKLQSLGL-DNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 200



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 91/167 (54%), Gaps = 24/167 (14%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK----- 472
           L++ +QN + +  L LS N  K LP  IG L+ L+ L+L +N+L  LP EIG LK     
Sbjct: 12  LTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKL 71

Query: 473 ------------------ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
                             +LQ L L +NQL +LP+ IG L  L +L + +N L ++P+EI
Sbjct: 72  NLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI 131

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           G L+NL +L L+ N  +  IP ++     LQ + LDN  L+ +P EI
Sbjct: 132 GQLKNLKSLNLSYNQ-IKTIPKKIEKLQKLQSLGLDNNQLTTLPQEI 177


>gi|260826171|ref|XP_002608039.1| hypothetical protein BRAFLDRAFT_74989 [Branchiostoma floridae]
 gi|229293389|gb|EEN64049.1| hypothetical protein BRAFLDRAFT_74989 [Branchiostoma floridae]
          Length = 975

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 151/522 (28%), Positives = 255/522 (48%), Gaps = 57/522 (10%)

Query: 87  ADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYV 146
           A LN++ + +      +L LDLS   +T +P  V  +T LE L +  NKL ++P  IG +
Sbjct: 2   AGLNLQPQIV----NGLLKLDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTNIPEAIGRL 57

Query: 147 TNLTCLGLAENSLTSLPDSLANLQQLRV-----------------------LDLRHNKLN 183
             L  L    N LTSLP ++ +LQ+L++                       L++++NKL 
Sbjct: 58  QKLDTLSAYSNMLTSLPHAIRSLQELKLLVVYNNDLSMLPDGLESLENLEYLNVKNNKLT 117

Query: 184 ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVT 243
           +LP  V+   +L +L +  N++ T    ++ L  L+ L +  N++ E+P  +  L NL  
Sbjct: 118 KLPSKVFSCPNLVVLNVGNNKLSTFPAGVEKLQKLTKLYLHSNELTEVPSGVYSLSNLEV 177

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL---RLSYNRLESV 300
           L +A N +  L  +I   T L +L +        P  + +L  L  L   +   ++ + V
Sbjct: 178 LCVARNPIRRLSDDITRLTRLKSLIVADCHFDEFPRQVLHLKTLEVLYAGQAGGSKFDMV 237

Query: 301 PETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYS 360
           P+ L    HL   ++E   L +LP   +S L ++  + L  N+F  +P     +  ++  
Sbjct: 238 PDELEDLQHLWYLSLENNLLRTLP-STMSHLHNLRVVNLWNNQFDTFPEVL-CELPAMKE 295

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL-GTWVGLT------------- 406
           ++ ++N I ++P  +  RA  L  +N+  N LT  P  + GT   +T             
Sbjct: 296 LDIKNNSITRLPIALH-RADKLEDLNVFGNPLTYPPRHVQGTRAIMTFLKQQGENLQPQT 354

Query: 407 -----ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
                +++L    ++ + E++ ++  LEVL +SNN L  +P +IG L+KL  +D   N L
Sbjct: 355 VNGHLKIDLSNQGLTSIPEEVFDITGLEVLDVSNNELTSIPEAIGRLQKLNRMDAGGNML 414

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            SLP  IG L +L  L +  N+L  LP  I  L NL  L VG N L ++P +I  L  L 
Sbjct: 415 TSLPQAIGSLSKLTHLYIYDNRLTELPPWICSLCNLEVLVVGNNRLSTLPPDIEKLRKLT 474

Query: 522 TLYLNDNTCLNNIPFELALCS--NLQIMSLDNCPLSQIPSEI 561
            L+++DN  L  +P   A+CS  NL+++   N  LS++P  +
Sbjct: 475 NLHIHDNQ-LKEVP--QAICSLLNLEVLVTGNNRLSKLPPGV 513



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 224/460 (48%), Gaps = 46/460 (10%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           ++ LP  +E L +LE L +  NKL  LPS++    NL  L +  N L++ P  +  LQ+L
Sbjct: 93  LSMLPDGLESLENLEYLNVKNNKLTKLPSKVFSCPNLVVLNVGNNKLSTFPAGVEKLQKL 152

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
             L L  N+L E+P  VY L++L++L +  N I+ +  DI  L+ L  L + D    E P
Sbjct: 153 TKLYLHSNELTEVPSGVYSLSNLEVLCVARNPIRRLSDDITRLTRLKSLIVADCHFDEFP 212

Query: 233 PELGELKNLVTL---DLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTR 289
            ++  LK L  L       +  + +P E+ +   L  L L++N L  +P  + +L NL  
Sbjct: 213 RQVLHLKTLEVLYAGQAGGSKFDMVPDELEDLQHLWYLSLENNLLRTLPSTMSHLHNLRV 272

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL-----LSSLTSINN-------- 336
           + L  N+ ++ PE L +   + E +++  +++ LP  L     L  L    N        
Sbjct: 273 VNLWNNQFDTFPEVLCELPAMKELDIKNNSITRLPIALHRADKLEDLNVFGNPLTYPPRH 332

Query: 337 ----------------------------ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
                                       I LS    T+ P       T +  ++  +N++
Sbjct: 333 VQGTRAIMTFLKQQGENLQPQTVNGHLKIDLSNQGLTSIPEEV-FDITGLEVLDVSNNEL 391

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
             IP  I  R + L++++   N+LTSLP  +G+   LT L +  N++++L   I +L NL
Sbjct: 392 TSIPEAI-GRLQKLNRMDAGGNMLTSLPQAIGSLSKLTHLYIYDNRLTELPPWICSLCNL 450

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           EVLV+ NN L  LP  I  LRKL  L + +N+L+ +P  I  L  L+ L+  +N+L  LP
Sbjct: 451 EVLVVGNNRLSTLPPDIEKLRKLTNLHIHDNQLKEVPQAICSLLNLEVLVTGNNRLSKLP 510

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
             +G L NL  L + +N ++ +P  + +L N   L +++N
Sbjct: 511 PGVGRLQNLRELFINDNQVKMLPLGVFSLFNFEVLDVSNN 550



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 154/313 (49%), Gaps = 35/313 (11%)

Query: 95  FLRCKEENI--------LNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYV 146
           FL+ + EN+        L +DLS   +T +P  V  +T LE L +  N+L S+P  IG +
Sbjct: 342 FLKQQGENLQPQTVNGHLKIDLSNQGLTSIPEEVFDITGLEVLDVSNNELTSIPEAIGRL 401

Query: 147 TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK 206
             L  +    N LTSLP ++ +L +L  L +  N+L ELP  +  L +L++L +  NR+ 
Sbjct: 402 QKLNRMDAGGNMLTSLPQAIGSLSKLTHLYIYDNRLTELPPWICSLCNLEVLVVGNNRLS 461

Query: 207 TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
           T+ PDI+ L  L+ L + DN+++E+P  +  L NL  L   +N L +LP  +G    L  
Sbjct: 462 TLPPDIEKLRKLTNLHIHDNQLKEVPQAICSLLNLEVLVTGNNRLSKLPPGVGRLQNLRE 521

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           L +  N++  +P  + +L N   L +S N+                       +S+LP G
Sbjct: 522 LFINDNQVKMLPLGVFSLFNFEVLDVSNNK-----------------------VSTLPPG 558

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
             ++  ++  + L  NKF  +P     +  ++  ++   N I ++P  +  RA  L  ++
Sbjct: 559 AKNA--NLREVYLYNNKFDTFPEVL-CELPAMEKLDIRFNNISRLPTALH-RADKLEDLD 614

Query: 387 MKDNLLTSLPLDL 399
           +  N LT  P D+
Sbjct: 615 VSGNPLTYPPQDV 627


>gi|260819564|ref|XP_002605106.1| hypothetical protein BRAFLDRAFT_123770 [Branchiostoma floridae]
 gi|229290437|gb|EEN61116.1| hypothetical protein BRAFLDRAFT_123770 [Branchiostoma floridae]
          Length = 586

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 211/419 (50%), Gaps = 16/419 (3%)

Query: 109 SKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLAN 168
           ++++++ LP  V  L  LE L L  N++ SLP+ I  +T +  LGL  N L  +P  +  
Sbjct: 170 NRNNLSSLPDEVCSLQQLEVLGLNDNEITSLPAGIRGLTKMKILGLDNNRLERVPKGICE 229

Query: 169 LQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           L +L  L L  N L  LP  +  L++L+ L L  N I+ +   + +L  L  L++ +N++
Sbjct: 230 LDELIKLGLSGNGLKHLPAEMENLSNLRELLLNDNEIQYLPVQLYWLECLEELALSNNQL 289

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + L P++G LK L  L L  NHLE LP EI   + L TL L  N L  +P+ + +L+NL 
Sbjct: 290 KSLSPQIGRLKELRILGLNSNHLEVLPDEICELSCLETLGLDSNRLKALPEHMASLVNLK 349

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD------------GLLSSLTS--I 334
            L +  N +E +P+ +     L    + G  + SLP              LL+S+T    
Sbjct: 350 ELYIGNNSIEYIPDDICILTELQIVAMTGNKIDSLPVEIANLKRVLLCYRLLNSVTCSVF 409

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + ++ NK  + P         V      HNQ+D +P G+ S   +L  ++++ N +  
Sbjct: 410 QIVAMTGNKIDSLPV-EIANLKRVQQFGLNHNQMDHLPLGMCS-MYDLQLLSLEGNRIPE 467

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP +    V + +L L +N +    + +  LV LE L ++NN + ++P+ I +LRKL+  
Sbjct: 468 LPSEFSNLVHIKQLELSSNSLEDFPDCLCVLVQLEYLGMNNNQVDQVPAEISHLRKLRVF 527

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
            L  N+   LP EI  L++L+RL L  N +  +   +  L NL+ LS+  N     P +
Sbjct: 528 LLNGNQFRDLPKEICTLRKLERLGLSRNLITKVAVEVKKLDNLTELSLNHNQFTDFPTQ 586



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 133/403 (33%), Positives = 209/403 (51%), Gaps = 28/403 (6%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           L L   +L E+P  ++ +  L  L+L  N I  V  DI+ L+ + +L+++DN++  LPP 
Sbjct: 38  LSLHGRELTEIPPDIFNMDELNCLFLGNNGISHVPRDIRRLNKVQVLAIQDNQLTSLPPT 97

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
           +  L+ +  L+++ N L ELP +IGN   L  L    N L ++PD + +L  L  L L+ 
Sbjct: 98  MFHLEAMKVLEVSGNQLTELPGDIGNLKQLNQLYANRNSLSSLPDEVCSLQQLEVLGLND 157

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
           N   S    LS C + N  N     LSSLPD +  SL  +  + L+ N+ T+ P+G    
Sbjct: 158 NLFPS----LSPCSYANRNN-----LSSLPDEV-CSLQQLEVLGLNDNEITSLPAG-IRG 206

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
            T +  +  ++N+++++P GI      L K+ +  N L  LP ++     L EL L  N+
Sbjct: 207 LTKMKILGLDNNRLERVPKGI-CELDELIKLGLSGNGLKHLPAEMENLSNLRELLLNDNE 265

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           I  L   +  L  LE L LSNN LK L   IG L++L+ L L  N LE LP+EI  L  L
Sbjct: 266 IQYLPVQLYWLECLEELALSNNQLKSLSPQIGRLKELRILGLNSNHLEVLPDEICELSCL 325

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           + L L SN+L +LP  +  L NL  L +G N+++ IP++I  L  L  + +  N  ++++
Sbjct: 326 ETLGLDSNRLKALPEHMASLVNLKELYIGNNSIEYIPDDICILTELQIVAMTGNK-IDSL 384

Query: 535 PFELA---------------LCSNLQIMSLDNCPLSQIPSEIV 562
           P E+A                CS  QI+++    +  +P EI 
Sbjct: 385 PVEIANLKRVLLCYRLLNSVTCSVFQIVAMTGNKIDSLPVEIA 427



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 230/486 (47%), Gaps = 35/486 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L    +T +PP +  +  L  L+L  N ++ +P  I  +  +  L + +N LTSLP +
Sbjct: 38  LSLHGRELTEIPPDIFNMDELNCLFLGNNGISHVPRDIRRLNKVQVLAIQDNQLTSLPPT 97

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + +L+ ++VL++  N+L ELP  +  L  L  LY   N + ++  ++  L  L +L + D
Sbjct: 98  MFHLEAMKVLEVSGNQLTELPGDIGNLKQLNQLYANRNSLSSLPDEVCSLQQLEVLGLND 157

Query: 226 --------------NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
                         N +  LP E+  L+ L  L L  N +  LP  I   T +  L L +
Sbjct: 158 NLFPSLSPCSYANRNNLSSLPDEVCSLQQLEVLGLNDNEITSLPAGIRGLTKMKILGLDN 217

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           N L  +P  +  L  L +L LS N L+ +P  +    +L E  +    +  LP  L   L
Sbjct: 218 NRLERVPKGICELDELIKLGLSGNGLKHLPAEMENLSNLRELLLNDNEIQYLPVQLY-WL 276

Query: 332 TSINNITLSRNKFTAY-PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
             +  + LS N+  +  P  G  +   +  +N  H  ++ +P  I      L  + +  N
Sbjct: 277 ECLEELALSNNQLKSLSPQIGRLKELRILGLNSNH--LEVLPDEI-CELSCLETLGLDSN 333

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L +LP  + + V L EL +G N I  + +DI  L  L+++ ++ N +  LP  I NL++
Sbjct: 334 RLKALPEHMASLVNLKELYIGNNSIEYIPDDICILTELQIVAMTGNKIDSLPVEIANLKR 393

Query: 451 L---------------KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           +               + + +  NK++SLP EI  LK +Q+  L  NQ+  LP  +  + 
Sbjct: 394 VLLCYRLLNSVTCSVFQIVAMTGNKIDSLPVEIANLKRVQQFGLNHNQMDHLPLGMCSMY 453

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           +L  LS+  N +  +P E   L ++  L L+ N+ L + P  L +   L+ + ++N  + 
Sbjct: 454 DLQLLSLEGNRIPELPSEFSNLVHIKQLELSSNS-LEDFPDCLCVLVQLEYLGMNNNQVD 512

Query: 556 QIPSEI 561
           Q+P+EI
Sbjct: 513 QVPAEI 518



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 177/343 (51%), Gaps = 13/343 (3%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+   ++ E+PP++  +  L  L L +N +  +P++I     +  L +Q N+L ++P  
Sbjct: 38  LSLHGRELTEIPPDIFNMDELNCLFLGNNGISHVPRDIRRLNKVQVLAIQDNQLTSLPPT 97

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           + +L  +  L +S N+L  +P  +     LN+      +LSSLPD +  SL  +  + L+
Sbjct: 98  MFHLEAMKVLEVSGNQLTELPGDIGNLKQLNQLYANRNSLSSLPDEV-CSLQQLEVLGLN 156

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N F   PS  P  + +        N +  +P  + S  + L  + + DN +TSLP  + 
Sbjct: 157 DNLF---PSLSPCSYAN-------RNNLSSLPDEVCS-LQQLEVLGLNDNEITSLPAGIR 205

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               +  L L  N++ ++ + I  L  L  L LS N LK LP+ + NL  L+ L L +N+
Sbjct: 206 GLTKMKILGLDNNRLERVPKGICELDELIKLGLSGNGLKHLPAEMENLSNLRELLLNDNE 265

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           ++ LP ++ +L+ L+ L L +NQL SL   IG L  L  L +  N+L+ +P+EI  L  L
Sbjct: 266 IQYLPVQLYWLECLEELALSNNQLKSLSPQIGRLKELRILGLNSNHLEVLPDEICELSCL 325

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVV 563
            TL L+ N  L  +P  +A   NL+ + + N  +  IP +I +
Sbjct: 326 ETLGLDSNR-LKALPEHMASLVNLKELYIGNNSIEYIPDDICI 367



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 15/210 (7%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           +Q D I   ++        +++    LT +P D+     L  L LG N IS +  DI+ L
Sbjct: 19  DQPDDIQAEVYVSGSGKFCLSLHGRELTEIPPDIFNMDELNCLFLGNNGISHVPRDIRRL 78

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
             ++VL + +N L  LP ++ +L  +K L++  N+L  LP +IG LK+L +L    N L 
Sbjct: 79  NKVQVLAIQDNQLTSLPPTMFHLEAMKVLEVSGNQLTELPGDIGNLKQLNQLYANRNSLS 138

Query: 486 SLPRAIGHLTNLSYLSVGE--------------NNLQSIPEEIGTLENLHTLYLNDNTCL 531
           SLP  +  L  L  L + +              NNL S+P+E+ +L+ L  L LNDN  +
Sbjct: 139 SLPDEVCSLQQLEVLGLNDNLFPSLSPCSYANRNNLSSLPDEVCSLQQLEVLGLNDNE-I 197

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            ++P  +   + ++I+ LDN  L ++P  I
Sbjct: 198 TSLPAGIRGLTKMKILGLDNNRLERVPKGI 227


>gi|417770611|ref|ZP_12418517.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|409947383|gb|EKN97381.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665930|gb|EMF31412.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 377

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/310 (38%), Positives = 173/310 (55%), Gaps = 7/310 (2%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+ + LP E+G+LKNL  L+L  N L  LPKEIG    L  L+L  N++  IP  
Sbjct: 51  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 110

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNIT 338
           +  L  L  L L  N+L ++P+ + +   L    +    L++LP   G L +L S+N   
Sbjct: 111 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLN--- 167

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           LS N+    P     +   + S+  ++NQ+  +P  I  + +NL  +++  N LT+LP +
Sbjct: 168 LSYNQIKTIPKK-IEKLQKLQSLGLDNNQLTTLPQEI-GQLQNLQSLDLSTNRLTTLPQE 225

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L +L L +NQ++ L  +I  L NL+ L L NN L  L   I  L+ LK LDL  
Sbjct: 226 IGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRS 285

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L + P EIG LK LQ L L SNQL +LP  IG L NL  L +  N L ++P+EIG L+
Sbjct: 286 NQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQ 345

Query: 519 NLHTLYLNDN 528
           NL  L+LN+N
Sbjct: 346 NLQELFLNNN 355



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/348 (34%), Positives = 183/348 (52%), Gaps = 26/348 (7%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N  ++R LDL  N+   LP  + KL +L+ L L  N++  +  +I  L NL  L
Sbjct: 38  LTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKL 97

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++  N+I+ +P E+ +L+ L +L L +N L  LP+EIG    L  L L  N+L  +P  +
Sbjct: 98  NLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI 157

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NL  L LSYN+++++P+ + K   L    ++   L++LP  +   L ++ ++ LS 
Sbjct: 158 GQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEI-GQLQNLQSLDLST 216

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P                               +NL  + +  N LT LP ++G 
Sbjct: 217 NRLTTLPQE-------------------------IGHLQNLQDLYLVSNQLTILPNEIGQ 251

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  LNL  N+++ LS++I+ L NL+ L L +N L   P  IG L+ L+ LDL  N+L
Sbjct: 252 LKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQL 311

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            +LP  IG LK LQ L L SNQL +LP+ IG L NL  L +  N L S
Sbjct: 312 TTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 359



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 180/335 (53%), Gaps = 26/335 (7%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L  N+  +LP +IG + NL  L L +N LT LP  +  L+ LR L+L  N++  +P  
Sbjct: 51  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 110

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + KL  L+ LYL  N++ T+  +I  L  L  L +  N++  LP E+G+LKNL +L+L++
Sbjct: 111 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 170

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N ++ +PK+I     L +L L +N+L  +P  +G L NL  L LS NRL ++P+ +    
Sbjct: 171 NQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 230

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L +  +    L+ LP+ +                          Q  ++ ++N  +N++
Sbjct: 231 NLQDLYLVSNQLTILPNEI-------------------------GQLKNLQTLNLRNNRL 265

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
             +   I  + +NL  ++++ N LT+ P ++G    L  L+LG+NQ++ L E I  L NL
Sbjct: 266 TTLSKEI-EQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNL 324

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           + L L +N L  LP  IG L+ L+ L L  N+L S
Sbjct: 325 QTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 359



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 174/311 (55%), Gaps = 3/311 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS +    LP  + KL +L+EL L  N+L  LP +IG + NL  L L+ N + ++P  
Sbjct: 51  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L+ L L +N+L  LP  + +L  L+ LYL  N++ T+  +I  L NL  L++  
Sbjct: 111 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I+ +P ++ +L+ L +L L +N L  LP+EIG    L +LDL  N L  +P  +G+L 
Sbjct: 171 NQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L  +P  + +  +L   N+    L++L    +  L ++ ++ L  N+ T
Sbjct: 231 NLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKE-IEQLQNLKSLDLRSNQLT 289

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P     Q  ++  ++   NQ+  +P GI  + KNL  +++  N LT+LP ++G    L
Sbjct: 290 TFPK-EIGQLKNLQVLDLGSNQLTTLPEGI-GQLKNLQTLDLDSNQLTTLPQEIGQLQNL 347

Query: 406 TELNLGTNQIS 416
            EL L  NQ+S
Sbjct: 348 QELFLNNNQLS 358



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 173/326 (53%), Gaps = 25/326 (7%)

Query: 252 EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN 311
           ++L K + N   + TLDL  N    +P  +G L NL  L L+ N+L  +P+ + +  +L 
Sbjct: 36  QDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 95

Query: 312 EFNVEGCALSSLPDGL----------------------LSSLTSINNITLSRNKFTAYPS 349
           + N+    + ++P  +                      +  L  +  + L +N+ T  P 
Sbjct: 96  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ 155

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
               Q  ++ S+N  +NQI  IP  I  + + L  + + +N LT+LP ++G    L  L+
Sbjct: 156 -EIGQLKNLKSLNLSYNQIKTIPKKI-EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLD 213

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           L TN+++ L ++I +L NL+ L L +N L  LP+ IG L+ L+ L+L  N+L +L  EI 
Sbjct: 214 LSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIE 273

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            L+ L+ L L+SNQL + P+ IG L NL  L +G N L ++PE IG L+NL TL L+ N 
Sbjct: 274 QLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQ 333

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLS 555
            L  +P E+    NLQ + L+N  LS
Sbjct: 334 -LTTLPQEIGQLQNLQELFLNNNQLS 358



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/212 (41%), Positives = 126/212 (59%), Gaps = 5/212 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L+LS + I  +P  +EKL  L+ L L  N+L +LP +IG + NL  L L+ N LT
Sbjct: 161 KNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLT 220

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  + +LQ L+ L L  N+L  LP  + +L +L+ L LR NR+ T+  +I+ L NL  
Sbjct: 221 TLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKS 280

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +R N++   P E+G+LKNL  LDL  N L  LP+ IG    L TLDL  N+L  +P  
Sbjct: 281 LDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 340

Query: 281 LGNLINLTRLRLSYNRLES-----VPETLSKC 307
           +G L NL  L L+ N+L S     + + L KC
Sbjct: 341 IGQLQNLQELFLNNNQLSSQEKKRIRKLLPKC 372



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 139/249 (55%), Gaps = 1/249 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS + I  +P  +EKL  L+ LYL  N+L +LP +IG +  L  L L +N LT
Sbjct: 92  KNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT 151

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L+ L+L +N++  +P  + KL  L+ L L  N++ T+  +I  L NL  
Sbjct: 152 TLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQS 211

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G L+NL  L L  N L  LP EIG    L TL+L++N L  +   
Sbjct: 212 LDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKE 271

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  N+L + P+ + +  +L   ++    L++LP+G +  L ++  + L 
Sbjct: 272 IEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEG-IGQLKNLQTLDLD 330

Query: 341 RNKFTAYPS 349
            N+ T  P 
Sbjct: 331 SNQLTTLPQ 339



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 125/217 (57%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L K+ +T LP  + +L +L+ L L  N++ ++P +I  +  L  LGL  N LT+LP  
Sbjct: 143 LYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQE 202

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ LDL  N+L  LP  +  L +L+ LYL  N++  +  +I  L NL  L++R+
Sbjct: 203 IGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 262

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  L  E+ +L+NL +LDL  N L   PKEIG    L  LDL  N+L  +P+ +G L 
Sbjct: 263 NRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLK 322

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           NL  L L  N+L ++P+ + +  +L E  +    LSS
Sbjct: 323 NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 359



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 106/176 (60%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K + + +L L  + +T LP  + +L +L+ L L  N+L +LP +IG++ NL  L L  N 
Sbjct: 182 KLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQ 241

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT LP+ +  L+ L+ L+LR+N+L  L   + +L +LK L LR N++ T   +I  L NL
Sbjct: 242 LTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNL 301

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
            +L +  N++  LP  +G+LKNL TLDL  N L  LP+EIG    L  L L +N+L
Sbjct: 302 QVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 357



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 106/177 (59%), Gaps = 1/177 (0%)

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
           +++  N   +LP ++G    L ELNL  NQ++ L ++I  L NL  L LS N +K +P  
Sbjct: 51  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 110

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
           I  L+KL+ L L  N+L +LP EIG L++LQ L L  NQL +LP+ IG L NL  L++  
Sbjct: 111 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 170

Query: 505 NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N +++IP++I  L+ L +L L DN  L  +P E+    NLQ + L    L+ +P EI
Sbjct: 171 NQIKTIPKKIEKLQKLQSLGL-DNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 226



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 91/167 (54%), Gaps = 24/167 (14%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK----- 472
           L++ +QN + +  L LS N  K LP  IG L+ L+ L+L +N+L  LP EIG LK     
Sbjct: 38  LTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKL 97

Query: 473 ------------------ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
                             +LQ L L +NQL +LP+ IG L  L +L + +N L ++P+EI
Sbjct: 98  NLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI 157

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           G L+NL +L L+ N  +  IP ++     LQ + LDN  L+ +P EI
Sbjct: 158 GQLKNLKSLNLSYNQ-IKTIPKKIEKLQKLQSLGLDNNQLTTLPQEI 203


>gi|198429521|ref|XP_002125267.1| PREDICTED: similar to Suppressor Of Clr family member (soc-2)
           [Ciona intestinalis]
          Length = 733

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 132/415 (31%), Positives = 213/415 (51%), Gaps = 10/415 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E++++L L  + +  LP  +  L  LEEL L  N L  + S +  + +L CLG+  N ++
Sbjct: 199 ESLIDLRLDDNRLRFLPSQLFTLKSLEELALSRNFLRRVHSHVSRLPSLRCLGMNHNQIS 258

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL---RFNRIKTVHPDIQYLSN 217
            +P  + +  +L +L L  N L +LP  + KL +L+ LY+   RF+  + +   +  L N
Sbjct: 259 FVPHQIGDCSKLEILGLESNHLTQLPPELGKLFTLRELYIGKNRFSGARCIPESLSRLRN 318

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L++L +  N++++LP EL    +L  + L+ N L  LP  + +   ++ LD+  N+L  I
Sbjct: 319 LTVLDVAGNQVKDLPLELKTASSLNEVKLSKNVLNHLPVALCSLVDVILLDVSDNKLKCI 378

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  + NL +L ++ LS N  +  P  L     L E N     +S++P  + S L  +  I
Sbjct: 379 PRDIRNLSSLRKIILSRNNFKQFPTELCHVTQLEEINFSNNLISTIPREI-SFLKRLTEI 437

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            +S NKF  +P         + +++   NQ+  IPY  F   +NL ++N+ DN     P+
Sbjct: 438 DISHNKFQQFPRE-LCGVVGLRALDVSGNQLTDIPYE-FKFFENLERLNLSDNQFDEFPI 495

Query: 398 DLGTWVGLTELNLGTNQISKLS---EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
            +     L EL+       KL    E I  L +LE + L +N ++ LP SI N R L+ L
Sbjct: 496 RVCFVTTLKELHFDQKCGRKLELVPEHICELEHLENISLDHNQIQNLPESISNCRSLRKL 555

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL-TNLSYLSVGENNLQ 508
            +  N LE LP  I  L  L+ L L+ NQL  LP  I  L   LS++S+GEN L+
Sbjct: 556 SVVGNVLEKLPESICELPNLKSLDLKGNQLTELPTQIHRLEKQLSHISLGENPLK 610



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 146/509 (28%), Positives = 238/509 (46%), Gaps = 57/509 (11%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIG--------------------- 144
           + L  +++T LP S+  L +LE L    N++ SLP +IG                     
Sbjct: 65  ISLRGNALTSLPESLCDLKYLEYLECSDNQIKSLPHRIGNLKNLIQLYANRNCLTELPVG 124

Query: 145 --YVTNLTCLGLAENSLTSLPDSLAN-LQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             Y+  L  LGL  N +T LP  +   L+Q+R+L L +N LN LP  + ++  L  L L 
Sbjct: 125 ISYLWQLEVLGLNGNRITHLPIEMGQFLEQIRILGLSNNCLNALPTAICRMRKLVKLGLS 184

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLA-------------- 247
            N+I ++   I+ L +L  L + DN++R LP +L  LK+L  L L+              
Sbjct: 185 GNKISSLPSTIRRLESLIDLRLDDNRLRFLPSQLFTLKSLEELALSRNFLRRVHSHVSRL 244

Query: 248 ---------HNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL- 297
                    HN +  +P +IG+C+ L  L L+ N L  +P  LG L  L  L +  NR  
Sbjct: 245 PSLRCLGMNHNQISFVPHQIGDCSKLEILGLESNHLTQLPPELGKLFTLRELYIGKNRFS 304

Query: 298 --ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
               +PE+LS+  +L   +V G  +  LP  L ++ +S+N + LS+N     P       
Sbjct: 305 GARCIPESLSRLRNLTVLDVAGNQVKDLPLELKTA-SSLNEVKLSKNVLNHLPV-ALCSL 362

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
             V  ++   N++  IP  I     +L K+ +  N     P +L     L E+N   N I
Sbjct: 363 VDVILLDVSDNKLKCIPRDI-RNLSSLRKIILSRNNFKQFPTELCHVTQLEEINFSNNLI 421

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           S +  +I  L  L  + +S+N  ++ P  +  +  L+ LD+  N+L  +P E  F + L+
Sbjct: 422 STIPREISFLKRLTEIDISHNKFQQFPRELCGVVGLRALDVSGNQLTDIPYEFKFFENLE 481

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGE---NNLQSIPEEIGTLENLHTLYLNDNTCLN 532
           RL L  NQ    P  +  +T L  L   +     L+ +PE I  LE+L  + L+ N  + 
Sbjct: 482 RLNLSDNQFDEFPIRVCFVTTLKELHFDQKCGRKLELVPEHICELEHLENISLDHNQ-IQ 540

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N+P  ++ C +L+ +S+    L ++P  I
Sbjct: 541 NLPESISNCRSLRKLSVVGNVLEKLPESI 569



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 231/493 (46%), Gaps = 77/493 (15%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIG-YVTNLTCLGLAENSL 159
           +N++ L  +++ +T LP  +  L  LE L L GN++  LP ++G ++  +  LGL+ N L
Sbjct: 106 KNLIQLYANRNCLTELPVGISYLWQLEVLGLNGNRITHLPIEMGQFLEQIRILGLSNNCL 165

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
            +LP ++  +++L  L L  NK++ LP  + +L SL  L L  NR++ +   +  L +L 
Sbjct: 166 NALPTAICRMRKLVKLGLSGNKISSLPSTIRRLESLIDLRLDDNRLRFLPSQLFTLKSLE 225

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L++  N +R +   +  L +L  L + HN +  +P +IG+C+ L  L L+ N L  +P 
Sbjct: 226 ELALSRNFLRRVHSHVSRLPSLRCLGMNHNQISFVPHQIGDCSKLEILGLESNHLTQLPP 285

Query: 280 MLGNLINLTRLRLSYNRL---ESVPETLSKCVHLNEFNVEG------------------- 317
            LG L  L  L +  NR      +PE+LS+  +L   +V G                   
Sbjct: 286 ELGKLFTLRELYIGKNRFSGARCIPESLSRLRNLTVLDVAGNQVKDLPLELKTASSLNEV 345

Query: 318 -----------CALSSLPDGLL---------------SSLTSINNITLSRNKFTAYPSGG 351
                       AL SL D +L                +L+S+  I LSRN F  +P+  
Sbjct: 346 KLSKNVLNHLPVALCSLVDVILLDVSDNKLKCIPRDIRNLSSLRKIILSRNNFKQFPTE- 404

Query: 352 PTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLG 411
               T +  INF +N I  IP  I S  K L+++++  N     P +L   VGL  L++ 
Sbjct: 405 LCHVTQLEEINFSNNLISTIPREI-SFLKRLTEIDISHNKFQQFPRELCGVVGLRALDVS 463

Query: 412 TNQISKLSEDIQNLVNLEVLVLSNN-------------LLKKL-------------PSSI 445
            NQ++ +  + +   NLE L LS+N              LK+L             P  I
Sbjct: 464 GNQLTDIPYEFKFFENLERLNLSDNQFDEFPIRVCFVTTLKELHFDQKCGRKLELVPEHI 523

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
             L  L+ + L+ N++++LP  I   + L++L +  N L  LP +I  L NL  L +  N
Sbjct: 524 CELEHLENISLDHNQIQNLPESISNCRSLRKLSVVGNVLEKLPESICELPNLKSLDLKGN 583

Query: 506 NLQSIPEEIGTLE 518
            L  +P +I  LE
Sbjct: 584 QLTELPTQIHRLE 596



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 191/392 (48%), Gaps = 35/392 (8%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           LD+R+  LNE+P  V+ +T L+ L                          +NK++E+P +
Sbjct: 21  LDIRN--LNEVPKEVFDITELQCLV-----------------------ANNNKLKEIPSD 55

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
           + +L  L  + L  N L  LP+ + +   L  L+   N++ ++P  +GNL NL +L  + 
Sbjct: 56  VRKLSCLQAISLRGNALTSLPESLCDLKYLEYLECSDNQIKSLPHRIGNLKNLIQLYANR 115

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
           N L  +P  +S    L    + G  ++ LP  +   L  I  + LS N   A P+    +
Sbjct: 116 NCLTELPVGISYLWQLEVLGLNGNRITHLPIEMGQFLEQIRILGLSNNCLNALPT-AICR 174

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
              +  +    N+I  +P  I  R ++L  + + DN L  LP  L T   L EL L  N 
Sbjct: 175 MRKLVKLGLSGNKISSLPSTI-RRLESLIDLRLDDNRLRFLPSQLFTLKSLEELALSRNF 233

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           + ++   +  L +L  L +++N +  +P  IG+  KL+ L LE N L  LP E+G L  L
Sbjct: 234 LRRVHSHVSRLPSLRCLGMNHNQISFVPHQIGDCSKLEILGLESNHLTQLPPELGKLFTL 293

Query: 475 QRLILQSNQLVS---LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
           + L +  N+      +P ++  L NL+ L V  N ++ +P E+ T  +L+ + L+ N  L
Sbjct: 294 RELYIGKNRFSGARCIPESLSRLRNLTVLDVAGNQVKDLPLELKTASSLNEVKLSKNV-L 352

Query: 532 NNIPFELALCSNLQIMSLD--NCPLSQIPSEI 561
           N++P  +ALCS + ++ LD  +  L  IP +I
Sbjct: 353 NHLP--VALCSLVDVILLDVSDNKLKCIPRDI 382



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 2/155 (1%)

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           + L    ++++ +++ ++  L+ LV +NN LK++PS +  L  L+ + L  N L SLP  
Sbjct: 19  VTLDIRNLNEVPKEVFDITELQCLVANNNKLKEIPSDVRKLSCLQAISLRGNALTSLPES 78

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
           +  LK L+ L    NQ+ SLP  IG+L NL  L    N L  +P  I  L  L  L LN 
Sbjct: 79  LCDLKYLEYLECSDNQIKSLPHRIGNLKNLIQLYANRNCLTELPVGISYLWQLEVLGLNG 138

Query: 528 NTCLNNIPFELA-LCSNLQIMSLDNCPLSQIPSEI 561
           N  + ++P E+      ++I+ L N  L+ +P+ I
Sbjct: 139 NR-ITHLPIEMGQFLEQIRILGLSNNCLNALPTAI 172


>gi|119597262|gb|EAW76856.1| hCG2044060 [Homo sapiens]
          Length = 671

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 213/426 (50%), Gaps = 26/426 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L++S + I+H+P  + +L ++ +L+ Y N + + PS +  + NL  L L +N L  
Sbjct: 212 NLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRH 271

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +PD+L +L+ LRVL+L +N+L   P  +  L  L  L L  N I ++  +I+ L NL  L
Sbjct: 272 IPDTLPSLKTLRVLNLEYNQLTTFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETL 331

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLE-----------------------ELPKEI 258
            M  NK+  L  E+ +L  +  L LA N LE                        +P++I
Sbjct: 332 LMDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKI 391

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
             C ML  L L  N+L  +P  +  L NL +L ++ N +  + + +S   ++      G 
Sbjct: 392 SCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKITDCISHLNNICSLEFSGN 451

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
            ++ +P   + +   I  I LS NK   +P  G     S+Y ++   N I +IP  I S 
Sbjct: 452 IITDVPIE-IKNCQKIIKIELSYNKIMYFPL-GLCALDSLYYLSVNGNYISEIPVDI-SF 508

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
           +K L  + + +N L        + + L  L+LG NQI K+   I N+++L VL+L  N  
Sbjct: 509 SKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKF 568

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           +  P  +  L  L+ LDL EN+L+ + ++I  LK +Q+L   SNQ +  P  +  L +L 
Sbjct: 569 ETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLE 628

Query: 499 YLSVGE 504
            L++ +
Sbjct: 629 QLNISQ 634



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 187/391 (47%), Gaps = 32/391 (8%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH-PDIQYLSNLSMLSMRDNKIRELP 232
            ++L    L E P  + K+  +K LYL  N+IKT    D   L  L +LS+++N +  LP
Sbjct: 145 TVNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSLP 204

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            E+  L NL  L+++HNH+  +PKEI     +  L   +N + N P  L  L NL  L L
Sbjct: 205 SEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSL 264

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
             N+L  +P+TL                         SL ++  + L  N+ T +P    
Sbjct: 265 GKNKLRHIPDTLP------------------------SLKTLRVLNLEYNQLTTFPKA-L 299

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                + S++   N I  +P  I    KNL  + M  N LT L +++   + + EL L  
Sbjct: 300 CFLPKLISLDLTGNLISSLPKEI-RELKNLETLLMDHNKLTFLAVEIFQLLKIKELQLAD 358

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N++  +S  I+N   L +L+L  NLLK +P  I     L+CL L +NKL  LP  I  L 
Sbjct: 359 NKLEVISHKIENFRELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLN 418

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            L++L +  N +V +   I HL N+  L    N +  +P EI   + +  + L+ N  + 
Sbjct: 419 NLRKLHVNRNNMVKITDCISHLNNICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIM- 477

Query: 533 NIPFELALCS--NLQIMSLDNCPLSQIPSEI 561
              F L LC+  +L  +S++   +S+IP +I
Sbjct: 478 --YFPLGLCALDSLYYLSVNGNYISEIPVDI 506



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 217/449 (48%), Gaps = 27/449 (6%)

Query: 104 LNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLP-SQIGYVTNLTCLGLAENSLTSL 162
             ++L    +   P  + K+ +++ LYL  N++ +   +  G +  L  L L EN L+SL
Sbjct: 144 FTVNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSL 203

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P  +  L  LR+L++ HN ++ +P  + +L +++ L+   N I+    D++ L NL +LS
Sbjct: 204 PSEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILS 263

Query: 223 MRDNKIRELPPELGELKNL-----------------------VTLDLAHNHLEELPKEIG 259
           +  NK+R +P  L  LK L                       ++LDL  N +  LPKEI 
Sbjct: 264 LGKNKLRHIPDTLPSLKTLRVLNLEYNQLTTFPKALCFLPKLISLDLTGNLISSLPKEIR 323

Query: 260 NCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA 319
               L TL + HN+L  +   +  L+ +  L+L+ N+LE +   +     L    ++   
Sbjct: 324 ELKNLETLLMDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNL 383

Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           L ++P+ + S    +  ++LS NK T  P     +  ++  ++   N + KI   I S  
Sbjct: 384 LKNIPEKI-SCCAMLECLSLSDNKLTELPKY-IHKLNNLRKLHVNRNNMVKITDCI-SHL 440

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
            N+  +    N++T +P+++     + ++ L  N+I      +  L +L  L ++ N + 
Sbjct: 441 NNICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLSVNGNYIS 500

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
           ++P  I   ++L  L+L ENKL         L  L+ L L  NQ+  +P +I ++ +L  
Sbjct: 501 EIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHV 560

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L +  N  ++ P E+ TLENL  L L++N
Sbjct: 561 LILCCNKFETFPRELCTLENLQVLDLSEN 589



 Score = 42.7 bits (99), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 68/135 (50%), Gaps = 7/135 (5%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + +L+L+LS++ +         L +L+ L L  N++  +P+ I  + +L  L L  N   
Sbjct: 510 KQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFE 569

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI-----QYL 215
           + P  L  L+ L+VLDL  N+L ++   +  L  ++   L F+  + +H  I     Q L
Sbjct: 570 TFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQ--KLNFSSNQFIHFPIELCQLQSL 627

Query: 216 SNLSMLSMRDNKIRE 230
             L++  ++  K+R+
Sbjct: 628 EQLNISQIKGRKVRD 642


>gi|428171499|gb|EKX40415.1| hypothetical protein GUITHDRAFT_61328, partial [Guillardia theta
           CCMP2712]
          Length = 621

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 161/500 (32%), Positives = 251/500 (50%), Gaps = 63/500 (12%)

Query: 100 EENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL 159
           E N+ +L LS + I  LP ++ KL++L +L +  N +  LP  I ++T+L+ L    N +
Sbjct: 123 ERNLTSLSLSNNRIQSLPSNISKLSNLTKLCITANHVEKLPDAIAHLTSLSHLEADNNKV 182

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL--------------------- 198
            + P  L NL  ++VL L HN L+ LP  +Y LT L+IL                     
Sbjct: 183 VTFPKKLGNLAGMKVLSLNHNFLDSLPADIYHLTKLQILDMCNFMLDTVPKEVFQKLNLE 242

Query: 199 --YLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELG-------------------- 236
             YL  N +  +  +I  L +L  + +  N++++LP   G                    
Sbjct: 243 NLYLSGNILNNIDKNIGMLVHLKQIFLVHNRLKDLPASFGTLVDLQLLMLDHNRFSIIPQ 302

Query: 237 ---ELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
              +LKNL+ L ++ N L+ EL  E+G+  +L  L L +N L  +PD +G   NL  + L
Sbjct: 303 CIFKLKNLLKLTISFNDLKGELSPEVGSLQLLEILWLNNNSLDVLPDDIGKCHNLKEMCL 362

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSS--LPDGLLSSLTSINNITLSRNKFTAYPSG 350
            +NRL  +PET+     L   +V   ALS+  LP   L +LT++  + L  N   A    
Sbjct: 363 KHNRLYHLPETMMFLSGLRLLDVSYNALSTLCLPQQ-LGALTAVQELMLEGNMIDATEID 421

Query: 351 G-PT---QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL-GTWVGL 405
             PT   Q + + S+    NQ+++IP  I S   NL  +++  N L SLP ++    + L
Sbjct: 422 SIPTPIFQMSHLVSLFLADNQLNEIPESI-SLLTNLVTLDISRNFLHSLPSEMIHLSLEL 480

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
           T LNL  N+I+++   IQNL NL+ L LS N L  +P+ I     L  ++ E+N++  LP
Sbjct: 481 TNLNLSVNKITRIPLSIQNLTNLQSLDLSKNDLTLIPAEISRCTALTSIEFEQNQIRFLP 540

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE----NN--LQSIPEEIGTLEN 519
             IG LK L+ L L+ N L SLP ++  + NLS L +      NN  L+S+P+E+G L  
Sbjct: 541 KAIGALKNLRTLNLKKNSLTSLPLSLSDIPNLSNLEIDHVLNINNLALRSVPQEVGDLVT 600

Query: 520 LHTLYLNDNTCLNNIPFELA 539
           L  L +++N  +  IP   A
Sbjct: 601 LKILNISNNQIV-EIPVFFA 619



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 237/468 (50%), Gaps = 17/468 (3%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD+S++ I  +   V  L+ L++L++  N ++ +P  +G +  L CL L  N +  + +S
Sbjct: 13  LDMSENRIRDVHEGVHLLSSLQDLHMEYNNISIIPPNLGRLYQLKCLHLQHNEIQDIKNS 72

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS-NLSMLSMR 224
              L  L  LD+ HNKL ++        +L  L +  NRI  +  +I  L  NL+ LS+ 
Sbjct: 73  TGTLTNLTDLDMSHNKLIKIGPDFRGNKNLTRLNISNNRILRLPAEIGMLERNLTSLSLS 132

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           +N+I+ LP  + +L NL  L +  NH+E+LP  I + T L  L+  +N++V  P  LGNL
Sbjct: 133 NNRIQSLPSNISKLSNLTKLCITANHVEKLPDAIAHLTSLSHLEADNNKVVTFPKKLGNL 192

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             +  L L++N L+S+P  +     L   ++    L ++P  +   L ++ N+ LS N  
Sbjct: 193 AGMKVLSLNHNFLDSLPADIYHLTKLQILDMCNFMLDTVPKEVFQKL-NLENLYLSGNIL 251

Query: 345 TAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
                  G       ++ +   HN++  +P   F    +L  + +  N  + +P  +   
Sbjct: 252 NNIDKNIGMLVHLKQIFLV---HNRLKDLPAS-FGTLVDLQLLMLDHNRFSIIPQCIFKL 307

Query: 403 VGLTELNLGTNQI-SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
             L +L +  N +  +LS ++ +L  LE+L L+NN L  LP  IG    LK + L+ N+L
Sbjct: 308 KNLLKLTISFNDLKGELSPEVGSLQLLEILWLNNNSLDVLPDDIGKCHNLKEMCLKHNRL 367

Query: 462 ESLPNEIGFLKELQRLILQSNQL--VSLPRAIGHLTNLSYLSVGEN-----NLQSIPEEI 514
             LP  + FL  L+ L +  N L  + LP+ +G LT +  L +  N      + SIP  I
Sbjct: 368 YHLPETMMFLSGLRLLDVSYNALSTLCLPQQLGALTAVQELMLEGNMIDATEIDSIPTPI 427

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             + +L +L+L DN  LN IP  ++L +NL  + +    L  +PSE++
Sbjct: 428 FQMSHLVSLFLADNQ-LNEIPESISLLTNLVTLDISRNFLHSLPSEMI 474



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 213/403 (52%), Gaps = 31/403 (7%)

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P S+  L  L  LD+  N++ ++   V+ L+SL+ L++ +N I  + P++  L  L  L 
Sbjct: 1   PPSILPLGSLTFLDMSENRIRDVHEGVHLLSSLQDLHMEYNNISIIPPNLGRLYQLKCLH 60

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           ++ N+I+++    G L NL  LD++HN L ++  +      L  L++ +N ++ +P  +G
Sbjct: 61  LQHNEIQDIKNSTGTLTNLTDLDMSHNKLIKIGPDFRGNKNLTRLNISNNRILRLPAEIG 120

Query: 283 NL-INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
            L  NLT L LS NR++S+P  +SK  +L +  +    +  LPD  ++ LTS++++    
Sbjct: 121 MLERNLTSLSLSNNRIQSLPSNISKLSNLTKLCITANHVEKLPDA-IAHLTSLSHLEADN 179

Query: 342 NKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           NK   +P   G      V S+N  HN +D +P  I+   K L  ++M + +L ++P    
Sbjct: 180 NKVVTFPKKLGNLAGMKVLSLN--HNFLDSLPADIYHLTK-LQILDMCNFMLDTVP---- 232

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
                              E  Q L NLE L LS N+L  +  +IG L  LK + L  N+
Sbjct: 233 ------------------KEVFQKL-NLENLYLSGNILNNIDKNIGMLVHLKQIFLVHNR 273

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLEN 519
           L+ LP   G L +LQ L+L  N+   +P+ I  L NL  L++  N+L+  +  E+G+L+ 
Sbjct: 274 LKDLPASFGTLVDLQLLMLDHNRFSIIPQCIFKLKNLLKLTISFNDLKGELSPEVGSLQL 333

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           L  L+LN+N+ L+ +P ++  C NL+ M L +  L  +P  ++
Sbjct: 334 LEILWLNNNS-LDVLPDDIGKCHNLKEMCLKHNRLYHLPETMM 375



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 146/493 (29%), Positives = 248/493 (50%), Gaps = 43/493 (8%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL-P 163
           +L +  ++I+ +PP++ +L  L+ L+L  N++  + +  G +TNLT L ++ N L  + P
Sbjct: 35  DLHMEYNNISIIPPNLGRLYQLKCLHLQHNEIQDIKNSTGTLTNLTDLDMSHNKLIKIGP 94

Query: 164 DSLANLQQLRVLDLRHNKLNELP----MVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           D   N + L  L++ +N++  LP    M+   LTSL    L  NRI+++  +I  LSNL+
Sbjct: 95  DFRGN-KNLTRLNISNNRILRLPAEIGMLERNLTSLS---LSNNRIQSLPSNISKLSNLT 150

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L +  N + +LP  +  L +L  L+  +N +   PK++GN   +  L L HN L ++P 
Sbjct: 151 KLCITANHVEKLPDAIAHLTSLSHLEADNNKVVTFPKKLGNLAGMKVLSLNHNFLDSLPA 210

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            + +L  L  L +    L++VP+ + + ++L    + G  L+++ D  +  L  +  I L
Sbjct: 211 DIYHLTKLQILDMCNFMLDTVPKEVFQKLNLENLYLSGNILNNI-DKNIGMLVHLKQIFL 269

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS-LPLD 398
             N+    P+   T    +  +  +HN+   IP  IF + KNL K+ +  N L   L  +
Sbjct: 270 VHNRLKDLPASFGT-LVDLQLLMLDHNRFSIIPQCIF-KLKNLLKLTISFNDLKGELSPE 327

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G+   L  L L  N +  L +DI    NL+ + L +N L  LP ++  L  L+ LD+  
Sbjct: 328 VGSLQLLEILWLNNNSLDVLPDDIGKCHNLKEMCLKHNRLYHLPETMMFLSGLRLLDVSY 387

Query: 459 NKLES--LPNEIGFLKELQRLILQSN-----QLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           N L +  LP ++G L  +Q L+L+ N     ++ S+P  I  +++L  L + +N L  IP
Sbjct: 388 NALSTLCLPQQLGALTAVQELMLEGNMIDATEIDSIPTPIFQMSHLVSLFLADNQLNEIP 447

Query: 512 EEIGTLENLHTLYLNDN----------------TCLN-------NIPFELALCSNLQIMS 548
           E I  L NL TL ++ N                T LN        IP  +   +NLQ + 
Sbjct: 448 ESISLLTNLVTLDISRNFLHSLPSEMIHLSLELTNLNLSVNKITRIPLSIQNLTNLQSLD 507

Query: 549 LDNCPLSQIPSEI 561
           L    L+ IP+EI
Sbjct: 508 LSKNDLTLIPAEI 520



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 30/207 (14%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           +  + I  +P  + +++HL  L+L  N+L  +P  I  +TNL  L ++ N L SLP  + 
Sbjct: 415 IDATEIDSIPTPIFQMSHLVSLFLADNQLNEIPESISLLTNLVTLDISRNFLHSLPSEMI 474

Query: 168 NLQ-QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDN 226
           +L  +L  L+L  NK+  +P+ +  LT+L+ L L  N +  +  +I   + L+ +    N
Sbjct: 475 HLSLELTNLNLSVNKITRIPLSIQNLTNLQSLDLSKNDLTLIPAEISRCTALTSIEFEQN 534

Query: 227 KIRELPPELGELKNLVTLDLAHNH-----------------------------LEELPKE 257
           +IR LP  +G LKNL TL+L  N                              L  +P+E
Sbjct: 535 QIRFLPKAIGALKNLRTLNLKKNSLTSLPLSLSDIPNLSNLEIDHVLNINNLALRSVPQE 594

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNL 284
           +G+   L  L++ +N++V IP     L
Sbjct: 595 VGDLVTLKILNISNNQIVEIPVFFAQL 621


>gi|456984031|gb|EMG20193.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 526

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 149/434 (34%), Positives = 233/434 (53%), Gaps = 11/434 (2%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDLS+      P  + +L +LE L L  N++  LP +I  + NL  L L  N LT 
Sbjct: 76  NVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTI 135

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  +  L+ L +L L +N+++ LP  + K  +L+ L LR NR+ T+   I  L  L  L
Sbjct: 136 VPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEEL 195

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++ +N+I+ LP E+G L+NL   +L+ N L  +PKEIGN   L  L L++N+L  +P  +
Sbjct: 196 NLENNRIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQM 255

Query: 282 GNLINLTRLRLSYNRLES-----VPETLSKC-VHLNEFNVEGCALSSLPDGLLSSLTSIN 335
             L +L  L L  N L S     +   L  C + L +   EG    +L   L   L  I 
Sbjct: 256 EKLQDLEVLNLLINPLLSKERKKIQALLPDCDIDLRDVE-EGETYRNLNLALEQPL-KIL 313

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
           +++L   +F  + S    +  ++ S++     +  +P  I  R K+L  +++  N L SL
Sbjct: 314 SLSLEYQQFPLF-SKEILRLKNLRSLSLYDTSLVALPKEIV-RLKHLEHLSLGLNQLKSL 371

Query: 396 PLDLGTWVGLTELNLGT-NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           P ++G    L  L++G  N+   L ++I  L NL  L+L+ N  K  P  I  L+KL  L
Sbjct: 372 PKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVIL 431

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           ++  N+L++LP +IG LK LQ L L  N+L +LP  IG L NL+ L +  N ++++PEEI
Sbjct: 432 NVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEI 491

Query: 515 GTLENLHTLYLNDN 528
             L+NL  L L +N
Sbjct: 492 ARLQNLRKLTLYEN 505



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 151/433 (34%), Positives = 224/433 (51%), Gaps = 24/433 (5%)

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           K A  P +I  +  L  L L EN +T LP  +  L+ L+ L L  NKL  +P  +++L +
Sbjct: 86  KFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKEIWELEN 145

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L IL L  NRI T+  +I+   NL  L +R N++  LP  +GELK L  L+L +N ++ L
Sbjct: 146 LTILRLENNRISTLPKEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEELNLENNRIKIL 205

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           PKEIG    L   +L  N+L +IP  +GNL NL  L L  N+L+++P  + K   L   N
Sbjct: 206 PKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLN 265

Query: 315 VEGCALSSLPDGLLSSLTSINNITLS--------RNKFTAYPSGGPTQFTSVYSINFEHN 366
           +    L S     + +L    +I L         RN   A       Q   + S++ E+ 
Sbjct: 266 LLINPLLSKERKKIQALLPDCDIDLRDVEEGETYRNLNLAL-----EQPLKILSLSLEYQ 320

Query: 367 QIDKIPYGIFS----RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
           Q     + +FS    R KNL  +++ D  L +LP ++     L  L+LG NQ+  L ++I
Sbjct: 321 Q-----FPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEI 375

Query: 423 QNLVNLEVL-VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
             L NL  L + +NN  + LP  I  L+ L+ L L +N+ +  P EI  LK+L  L + +
Sbjct: 376 GLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNT 435

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           NQL +LP  IG L  L  L +  N L ++P EIG L NL  LYL  N  +  +P E+A  
Sbjct: 436 NQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNR-IKTLPEEIARL 494

Query: 542 SNLQIMSLDNCPL 554
            NL+ ++L   P+
Sbjct: 495 QNLRKLTLYENPI 507



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 183/399 (45%), Gaps = 58/399 (14%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
           SN+ +L +   K    P E+ EL+ L  L L  N +  LP+EI     L  L L  N+L 
Sbjct: 75  SNVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLT 134

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL-------- 327
            +P  +  L NLT LRL  NR+ ++P+ + K  +L E ++ G  L +LP+G+        
Sbjct: 135 IVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEE 194

Query: 328 --------------LSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKI 371
                         + +L ++    LS NK  + P   G       +Y    E+NQ+  +
Sbjct: 195 LNLENNRIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLY---LENNQLKTL 251

Query: 372 PYGIFSRAKNLSKVNMKDNLLTS----------------------------LPLDLGTWV 403
           P  +  + ++L  +N+  N L S                            L L L   +
Sbjct: 252 PRQM-EKLQDLEVLNLLINPLLSKERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPL 310

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            +  L+L   Q    S++I  L NL  L L +  L  LP  I  L+ L+ L L  N+L+S
Sbjct: 311 KILSLSLEYQQFPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKS 370

Query: 464 LPNEIGFLKELQRL-ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
           LP EIG L+ L+ L I  +N+   LP+ I  L NL  L + +N  +  P+EI  L+ L  
Sbjct: 371 LPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVI 430

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L +N N  L+ +P ++     LQ++ L +  L+ +PSEI
Sbjct: 431 LNVNTNQ-LDALPEKIGRLKGLQMLDLSHNRLTTLPSEI 468



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 162/367 (44%), Gaps = 82/367 (22%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLAS---------------------- 138
           EN+  L L  + I+ LP  +EK  +L+EL L GN+L +                      
Sbjct: 144 ENLTILRLENNRISTLPKEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEELNLENNRIK 203

Query: 139 -LPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
            LP +IG + NL    L+ N L S+P  + NLQ LR+L L +N+L  LP  + KL  L++
Sbjct: 204 ILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 263

Query: 198 LYLRFN--------RIKTVHPD-------------------------------------- 211
           L L  N        +I+ + PD                                      
Sbjct: 264 LNLLINPLLSKERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFP 323

Query: 212 -----IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
                I  L NL  LS+ D  +  LP E+  LK+L  L L  N L+ LPKEIG    L +
Sbjct: 324 LFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRS 383

Query: 267 LDL-QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
           LD+  +NE   +P  +  L NL  L L+ NR +  P+ + +   L   NV    L +LP+
Sbjct: 384 LDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPE 443

Query: 326 GLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
             +  L  +  + LS N+ T  PS  G     T +Y    ++N+I  +P  I +R +NL 
Sbjct: 444 K-IGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELY---LQYNRIKTLPEEI-ARLQNLR 498

Query: 384 KVNMKDN 390
           K+ + +N
Sbjct: 499 KLTLYEN 505



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 189/421 (44%), Gaps = 80/421 (19%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKL-----------------------ASLPSQ 142
           L L ++ IT LP  + KL +L+ELYL GNKL                       ++LP +
Sbjct: 103 LKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLENNRISTLPKE 162

Query: 143 IGYVTNLTCLGLAENSLTSLPDSLAN-----------------------LQQLRVLDLRH 179
           I    NL  L L  N L +LP+ +                         L+ L + +L  
Sbjct: 163 IEKSKNLQELDLRGNRLVTLPEGIGELKLLEELNLENNRIKILPKEIGALENLWIFNLSG 222

Query: 180 NKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDN--------KIREL 231
           NKL  +P  +  L +L++LYL  N++KT+   ++ L +L +L++  N        KI+ L
Sbjct: 223 NKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQAL 282

Query: 232 PP---------ELGE-LKNL----------VTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
            P         E GE  +NL          ++L L +       KEI     L +L L  
Sbjct: 283 LPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFPLFSKEILRLKNLRSLSLYD 342

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG-CALSSLPDGLLSS 330
             LV +P  +  L +L  L L  N+L+S+P+ +    +L   ++        LP   ++ 
Sbjct: 343 TSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKE-IAR 401

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           L ++ ++ L++N+F  +P     +   +  +N   NQ+D +P  I  R K L  +++  N
Sbjct: 402 LQNLRSLLLNQNRFKIFPK-EIWELKKLVILNVNTNQLDALPEKI-GRLKGLQMLDLSHN 459

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            LT+LP ++G    LTEL L  N+I  L E+I  L NL  L L  N +   P  +  +RK
Sbjct: 460 RLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYENPIP--PQELDKIRK 517

Query: 451 L 451
           L
Sbjct: 518 L 518


>gi|421090943|ref|ZP_15551732.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000270|gb|EKO50915.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 376

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/334 (36%), Positives = 182/334 (54%), Gaps = 27/334 (8%)

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           +++L L  NR KT+  +I  L NL  L++  N++  LP E+G+LKNL  L+L  N    L
Sbjct: 48  VRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTIL 107

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           PKE+     L  L L  N L  +P+ +G L NL  L+L++N+ +++P+ + +  +L   N
Sbjct: 108 PKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLN 167

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +    L++LP+ +   L ++ ++ L  N+ T  P+              E  Q+ K    
Sbjct: 168 LGNNQLTALPNEI-GQLQNLKSLDLGSNRLTTLPN--------------EIGQLQK---- 208

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
                  L  + +  N LT+LP ++G    L EL LG+NQ++ L  +I  L NL+ L L 
Sbjct: 209 -------LQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLR 261

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
           +N L  L   I  L+ LK LDL  N+L + P EI  LK LQ L L SNQL +LP  I  L
Sbjct: 262 SNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQL 321

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            NL  L +G N L +IP+EIG L+NL  LYLN+N
Sbjct: 322 KNLQVLDLGSNQLTTIPKEIGQLQNLQ-LYLNNN 354



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/335 (34%), Positives = 176/335 (52%), Gaps = 27/335 (8%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L  N+  +LP +IG + NL  L L +N LT LP  +  L+ LR L+L  N+   LP  
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKE 110

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           V KL +LK L L  NR+ T+  +I  L NL +L +  N+ + +P E+G+LKNL TL+L +
Sbjct: 111 VEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGN 170

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L  LP EIG    L +LDL  N L  +P+ +G L  L  L LS NRL ++P  + +  
Sbjct: 171 NQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQ 230

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L E  +    L+ LP+  +  L ++  + L  N+ T                       
Sbjct: 231 NLQELYLGSNQLTILPNE-IGQLKNLQTLYLRSNRLTTLSKD------------------ 271

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
                    + +NL  +++ +N LT+ P ++     L  L+LG+NQ++ L E+I+ L NL
Sbjct: 272 -------IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNL 324

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           +VL L +N L  +P  IG L+ L+ L L  N+L S
Sbjct: 325 QVLDLGSNQLTTIPKEIGQLQNLQ-LYLNNNQLSS 358



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/318 (35%), Positives = 168/318 (52%), Gaps = 27/318 (8%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L+L+ N  + LPKEIG    L  L+L  N+L  +P  +G L NL +L L  N+   +P+ 
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKE 110

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           + K  +L E ++    L++LP+ +                          Q  ++  +  
Sbjct: 111 VEKLENLKELSLGSNRLTTLPNEI-------------------------GQLKNLRVLKL 145

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
            HNQ   IP  I  + KNL  +N+ +N LT+LP ++G    L  L+LG+N+++ L  +I 
Sbjct: 146 THNQFKTIPKEI-GQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIG 204

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
            L  L+ L LS N L  LP+ IG L+ L+ L L  N+L  LPNEIG LK LQ L L+SN+
Sbjct: 205 QLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNR 264

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
           L +L + I  L NL  L +  N L + P+EI  L+NL  L L  N  L  +P E+    N
Sbjct: 265 LTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQ-LTTLPEEIEQLKN 323

Query: 544 LQIMSLDNCPLSQIPSEI 561
           LQ++ L +  L+ IP EI
Sbjct: 324 LQVLDLGSNQLTTIPKEI 341



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 169/311 (54%), Gaps = 4/311 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS +    LP  + KL +L+EL L  N+L  LP +IG + NL  L L +N  T LP  
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L  N+L  LP  + +L +L++L L  N+ KT+  +I  L NL  L++ +
Sbjct: 111 VEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGN 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L+NL +LDL  N L  LP EIG    L  L L  N L  +P+ +G L 
Sbjct: 171 NQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQ 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L  +P  + +  +L    +    L++L    +  L ++ ++ L  N+ T
Sbjct: 231 NLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKD-IEQLQNLKSLDLWNNQLT 289

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P     Q  ++  ++   NQ+  +P  I  + KNL  +++  N LT++P ++G    L
Sbjct: 290 TFPK-EIEQLKNLQVLDLGSNQLTTLPEEI-EQLKNLQVLDLGSNQLTTIPKEIGQLQNL 347

Query: 406 TELNLGTNQIS 416
            +L L  NQ+S
Sbjct: 348 -QLYLNNNQLS 357



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 127/226 (56%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  L L  + +T LP  + +L +L  L L  N+  ++P +IG + NL  L L  N 
Sbjct: 113 KLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQ 172

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP+ +  LQ L+ LDL  N+L  LP  + +L  L+ LYL  NR+ T+  +I  L NL
Sbjct: 173 LTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNL 232

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L +  N++  LP E+G+LKNL TL L  N L  L K+I     L +LDL +N+L   P
Sbjct: 233 QELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFP 292

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
             +  L NL  L L  N+L ++PE + +  +L   ++    L+++P
Sbjct: 293 KEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTTIP 338



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 136/248 (54%), Gaps = 1/248 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  +  T LP  VEKL +L+EL L  N+L +LP++IG + NL  L L  N   
Sbjct: 92  KNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFK 151

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++P  +  L+ L+ L+L +N+L  LP  + +L +LK L L  NR+ T+  +I  L  L  
Sbjct: 152 TIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQD 211

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+L+NL  L L  N L  LP EIG    L TL L+ N L  +   
Sbjct: 212 LYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKD 271

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  N+L + P+ + +  +L   ++    L++LP+  +  L ++  + L 
Sbjct: 272 IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEE-IEQLKNLQVLDLG 330

Query: 341 RNKFTAYP 348
            N+ T  P
Sbjct: 331 SNQLTTIP 338



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  +I N   ++ L+L  N+ ++LP EIG LK LQ L L  NQL  LP+ IG L NL 
Sbjct: 36  RDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 95

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L++ +N    +P+E+  LENL  L L  N  L  +P E+    NL+++ L +     IP
Sbjct: 96  KLNLHDNQFTILPKEVEKLENLKELSLGSNR-LTTLPNEIGQLKNLRVLKLTHNQFKTIP 154

Query: 559 SEI 561
            EI
Sbjct: 155 KEI 157


>gi|198437403|ref|XP_002124871.1| PREDICTED: similar to soc-2 (suppressor of clear) homolog [Ciona
           intestinalis]
          Length = 954

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 148/506 (29%), Positives = 255/506 (50%), Gaps = 44/506 (8%)

Query: 89  LNIEKEFLR------CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQ 142
           LN  K  LR      C  E +  L+ + + +  LP ++ K + L  +    NKL +LP+ 
Sbjct: 86  LNCSKNKLRFLPTSICALEFLTELNATYNQLIVLPRNIYKCSMLTTIRAAHNKLRALPTS 145

Query: 143 IGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYK-----LTSLKI 197
           IG +  L  L +  N+L SLP S+  ++  +V++   NKL+ LP    K     L  ++ 
Sbjct: 146 IGSIPTLLMLDVGNNALKSLPKSVYQIR--KVINCSSNKLHRLPEPETKKSKSGLQLIRC 203

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           +    N I+++  ++ +L+NL  LS+ +N++ ELP  +GEL+ L+T+D+  N L E+P  
Sbjct: 204 IEASHNEIESLPRNLSFLTNLQSLSLSNNQLTELPQNIGELQKLITVDVCQNSLSEIPDS 263

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
            GN + L  LDL+ N+L  +P+ +  L +L  L  + N+++++PE L +   L   ++  
Sbjct: 264 FGNLSNLRLLDLRENKLTTLPESMSRLEDLITLDCAGNQIKTIPEELKQIKSLQNIDLSA 323

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             + S+P   LS+++++  + LSRN  +    G      S+ ++N   NQ+ K+P  I  
Sbjct: 324 NQIESVPT--LSNMSNLVTVDLSRNAISTL--GDIEDMPSMENLNLSENQLAKVPDSI-G 378

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
             ++L    + +N +  LP  +G    L  +++  NQ++ L+  ++ L  LE+L   NN 
Sbjct: 379 NIESLENFRLANNQIQELPQTIGNLSSLQFIDVSNNQLTSLNTSLRRLGTLEILKAGNNQ 438

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLES------LPNEIGFLKE------------------ 473
           L  LP   G LR L+ +DL  NKL +      LP  I  LK                   
Sbjct: 439 LTTLPQPFGFLRSLREVDLSNNKLNTLVGNGPLPRGIKRLKANGNLFKGKVPGRVLHELR 498

Query: 474 -LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            L  L L S+++ SLP +IG L  L  L++  N L S+PE   T+ +L  + L+ N  + 
Sbjct: 499 LLTVLDLSSSEITSLPDSIGRLRLLQNLNLENNQLHSLPESSETMYSLKDINLSKN-AIK 557

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIP 558
            +P  L     L  M+  +  L+++P
Sbjct: 558 KLPQNLHNWKRLVTMNAAHNKLAEMP 583



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/411 (30%), Positives = 213/411 (51%), Gaps = 17/411 (4%)

Query: 128 ELYLYG-----NKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
           E YL G     N+L SL  +IG   NL  L  ++N L  LP S+  L+ L  L+  +N+L
Sbjct: 57  EKYLIGLDVSDNRLKSLDQEIGDFANLKTLNCSKNKLRFLPTSICALEFLTELNATYNQL 116

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
             LP  +YK + L  +    N+++ +   I  +  L ML + +N ++ LP  + +++ ++
Sbjct: 117 IVLPRNIYKCSMLTTIRAAHNKLRALPTSIGSIPTLLMLDVGNNALKSLPKSVYQIRKVI 176

Query: 243 TLDLAHNHLEELP-----KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
             + + N L  LP     K      ++  ++  HNE+ ++P  L  L NL  L LS N+L
Sbjct: 177 --NCSSNKLHRLPEPETKKSKSGLQLIRCIEASHNEIESLPRNLSFLTNLQSLSLSNNQL 234

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
             +P+ + +   L   +V   +LS +PD    +L+++  + L  NK T  P    ++   
Sbjct: 235 TELPQNIGELQKLITVDVCQNSLSEIPDS-FGNLSNLRLLDLRENKLTTLPESM-SRLED 292

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           + +++   NQI  IP  +  + K+L  +++  N + S+P  L     L  ++L  N IS 
Sbjct: 293 LITLDCAGNQIKTIPEEL-KQIKSLQNIDLSANQIESVP-TLSNMSNLVTVDLSRNAIST 350

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L  DI+++ ++E L LS N L K+P SIGN+  L+   L  N+++ LP  IG L  LQ +
Sbjct: 351 LG-DIEDMPSMENLNLSENQLAKVPDSIGNIESLENFRLANNQIQELPQTIGNLSSLQFI 409

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            + +NQL SL  ++  L  L  L  G N L ++P+  G L +L  + L++N
Sbjct: 410 DVSNNQLTSLNTSLRRLGTLEILKAGNNQLTTLPQPFGFLRSLREVDLSNN 460



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 241/532 (45%), Gaps = 62/532 (11%)

Query: 61  VKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCK-EENILNLDLSKSSITHLPPS 119
           V++   +K P+S   +        ++A     KEF R   E+ ++ LD+S + +  L   
Sbjct: 17  VQRRRKLKSPKSRDKEADRVLSRVLRATNGTRKEFDRWGCEKYLIGLDVSDNRLKSLDQE 76

Query: 120 VEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRH 179
           +    +L+ L    NKL  LP+ I  +  LT L    N L  LP ++     L  +   H
Sbjct: 77  IGDFANLKTLNCSKNKLRFLPTSICALEFLTELNATYNQLIVLPRNIYKCSMLTTIRAAH 136

Query: 180 NKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN---------------------- 217
           NKL  LP  +  + +L +L +  N +K++   +  +                        
Sbjct: 137 NKLRALPTSIGSIPTLLMLDVGNNALKSLPKSVYQIRKVINCSSNKLHRLPEPETKKSKS 196

Query: 218 ----LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
               +  +    N+I  LP  L  L NL +L L++N L ELP+ IG    L+T+D+  N 
Sbjct: 197 GLQLIRCIEASHNEIESLPRNLSFLTNLQSLSLSNNQLTELPQNIGELQKLITVDVCQNS 256

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L  IPD  GNL NL  L L  N+L ++PE++S+   L   +  G  + ++P+ L      
Sbjct: 257 LSEIPDSFGNLSNLRLLDLRENKLTTLPESMSRLEDLITLDCAGNQIKTIPEEL------ 310

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
                               Q  S+ +I+   NQI+ +P    S   NL  V++  N ++
Sbjct: 311 -------------------KQIKSLQNIDLSANQIESVP--TLSNMSNLVTVDLSRNAIS 349

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +L  D+     +  LNL  NQ++K+ + I N+ +LE   L+NN +++LP +IGNL  L+ 
Sbjct: 350 TLG-DIEDMPSMENLNLSENQLAKVPDSIGNIESLENFRLANNQIQELPQTIGNLSSLQF 408

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           +D+  N+L SL   +  L  L+ L   +NQL +LP+  G L +L  + +  N L ++   
Sbjct: 409 IDVSNNQLTSLNTSLRRLGTLEILKAGNNQLTTLPQPFGFLRSLREVDLSNNKLNTLVGN 468

Query: 514 IGTLENLHTLYLNDNTCLNNIP----FELALCSNLQIMSLDNCPLSQIPSEI 561
                 +  L  N N     +P     EL L   L ++ L +  ++ +P  I
Sbjct: 469 GPLPRGIKRLKANGNLFKGKVPGRVLHELRL---LTVLDLSSSEITSLPDSI 517



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 133/525 (25%), Positives = 235/525 (44%), Gaps = 103/525 (19%)

Query: 134 NKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLT 193
           N++ SLP  + ++TNL  L L+ N LT LP ++  LQ+L  +D+  N L+E+P     L+
Sbjct: 209 NEIESLPRNLSFLTNLQSLSLSNNQLTELPQNIGELQKLITVDVCQNSLSEIPDSFGNLS 268

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           +L++L LR N++ T+   +  L +L  L    N+I+ +P EL ++K+L  +DL+ N +E 
Sbjct: 269 NLRLLDLRENKLTTLPESMSRLEDLITLDCAGNQIKTIPEELKQIKSLQNIDLSANQIES 328

Query: 254 LPKEIGNCTMLVTLDLQH----------------------NELVNIPDMLGNLINLTRLR 291
           +P  + N + LVT+DL                        N+L  +PD +GN+ +L   R
Sbjct: 329 VP-TLSNMSNLVTVDLSRNAISTLGDIEDMPSMENLNLSENQLAKVPDSIGNIESLENFR 387

Query: 292 LSYNRLESVPETLSKCVHLNEFNVEGCALSSL-------------------------PDG 326
           L+ N+++ +P+T+     L   +V    L+SL                         P G
Sbjct: 388 LANNQIQELPQTIGNLSSLQFIDVSNNQLTSLNTSLRRLGTLEILKAGNNQLTTLPQPFG 447

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID-KIPYGIFSRAKNLSKV 385
            L SL  ++   LS NK       GP     +  +    N    K+P  +    + L+ +
Sbjct: 448 FLRSLREVD---LSNNKLNTLVGNGPLP-RGIKRLKANGNLFKGKVPGRVLHELRLLTVL 503

Query: 386 NMKDNLLTSLPLDLG-----------------------TWVGLTELNLGTNQISKLSEDI 422
           ++  + +TSLP  +G                       T   L ++NL  N I KL +++
Sbjct: 504 DLSSSEITSLPDSIGRLRLLQNLNLENNQLHSLPESSETMYSLKDINLSKNAIKKLPQNL 563

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            N   L  +  ++N L ++P ++  L  L  LD+  N+LE +   I  +  L+ L LQ+N
Sbjct: 564 HNWKRLVTMNAAHNKLAEMPENLHQLPVLATLDMSNNELEQIDANIFHMSRLKVLRLQNN 623

Query: 483 QL---------VSLPRAIGH-----------------LTNLSYLSVGENNLQSIPEEIGT 516
           ++         V+L  ++                   L+++ +     N L  IPE+I  
Sbjct: 624 RINRINKTTNDVTLSSSLHEVDFSGNELEELLEDMEVLSSVRWFDASCNKLSEIPEDIHK 683

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+    L  ++N  +  IP ++    +++   L N  ++QIP  I
Sbjct: 684 LKWATYLNFSENK-IQKIPKKVDRLKSIENFKLANNQITQIPQNI 727



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 232/482 (48%), Gaps = 56/482 (11%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLP------------------SQ 142
           E+++ LD + + I  +P  ++++  L+ + L  N++ S+P                  S 
Sbjct: 291 EDLITLDCAGNQIKTIPEELKQIKSLQNIDLSANQIESVPTLSNMSNLVTVDLSRNAIST 350

Query: 143 IGYVTNLTC---LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILY 199
           +G + ++     L L+EN L  +PDS+ N++ L    L +N++ ELP  +  L+SL+ + 
Sbjct: 351 LGDIEDMPSMENLNLSENQLAKVPDSIGNIESLENFRLANNQIQELPQTIGNLSSLQFID 410

Query: 200 LRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL----- 254
           +  N++ +++  ++ L  L +L   +N++  LP   G L++L  +DL++N L  L     
Sbjct: 411 VSNNQLTSLNTSLRRLGTLEILKAGNNQLTTLPQPFGFLRSLREVDLSNNKLNTLVGNGP 470

Query: 255 -PKEI------GNC-------------TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
            P+ I      GN               +L  LDL  +E+ ++PD +G L  L  L L  
Sbjct: 471 LPRGIKRLKANGNLFKGKVPGRVLHELRLLTVLDLSSSEITSLPDSIGRLRLLQNLNLEN 530

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLTSINNITLSRNKFTAYPSGGP 352
           N+L S+PE+      L + N+   A+  LP  L     L ++N    + NK    P    
Sbjct: 531 NQLHSLPESSETMYSLKDINLSKNAIKKLPQNLHNWKRLVTMN---AAHNKLAEMPEN-L 586

Query: 353 TQFTSVYSINFEHNQIDKIPYGIF--SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
            Q   + +++  +N++++I   IF  SR K L   N + N +     D+     L E++ 
Sbjct: 587 HQLPVLATLDMSNNELEQIDANIFHMSRLKVLRLQNNRINRINKTTNDVTLSSSLHEVDF 646

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N++ +L ED++ L ++     S N L ++P  I  L+    L+  ENK++ +P ++  
Sbjct: 647 SGNELEELLEDMEVLSSVRWFDASCNKLSEIPEDIHKLKWATYLNFSENKIQKIPKKVDR 706

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN-- 528
           LK ++   L +NQ+  +P+ I    +LS+L +  N++   P+    +  L+ L    N  
Sbjct: 707 LKSIENFKLANNQITQIPQNIKRCKHLSHLDITGNSISDFPQGFFKMRKLNELLSQGNPL 766

Query: 529 TC 530
           TC
Sbjct: 767 TC 768


>gi|424841835|ref|ZP_18266460.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395320033|gb|EJF52954.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 509

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 221/450 (49%), Gaps = 28/450 (6%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L  LP +IG    +  L + +N L  LPDSLANL QL  LD+  N+L+ LP V+++L  L
Sbjct: 28  LQELPREIGRSKGMKQLNIEDNRLKDLPDSLANLGQLEWLDISDNRLSPLPKVLFQLRKL 87

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
             L L  N +  +  ++     L  L +++N+++ELP   G+LK L  L L  N L  LP
Sbjct: 88  NWLDLSNNGLSELGEELAAWEELMRLDLKNNQLQELPNNFGQLKALRKLLLERNQLSALP 147

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
              G    L  LDL  N    +P+ +G L  L +L +S N +  + + L +  +L E   
Sbjct: 148 ASFGQLQQLQQLDLSENAFTQLPEEIGQLKALKQLSISANPMPQLAKVLGQLSNLEELQA 207

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
           EG  L  +P+  +  L ++ ++ L  N+  +  +      +++  ++  +N+++K+P  +
Sbjct: 208 EGLGLEEVPEE-IGQLNNLQSLFLGYNRLKSL-AANLGSCSALEQLDLGNNRLEKLPLNL 265

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
            +R + L  +N++DN L  LPL L     L EL++    +  L   + +L  L  L LS 
Sbjct: 266 -ARCQQLKVLNLEDNPLGELPLFLQEIQALEELDMSNCNLVNLGAGL-SLPALHWLDLSA 323

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI-------------GFLK---------- 472
           N L+ LPS+ G L  L  LDL +N+L+  P  +              FL+          
Sbjct: 324 NQLRDLPSNFGQLTALSWLDLRDNQLQKWPKALEELSQIRQLLLAGNFLRQINLSELDWP 383

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
           EL+ L L  N+L  L      L  L  L++ +N L  +PE+   L NL  L L+DN  L+
Sbjct: 384 ELEELDLSKNELTELSGQWDKLPQLRQLNLEKNQLAQLPEDWQPLSNLEELDLSDNQ-LD 442

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           ++P  L     +Q + L N   ++ P  ++
Sbjct: 443 SLPQSLGKLDQIQWLDLRNNQFTEFPQALL 472



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 214/448 (47%), Gaps = 51/448 (11%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++  + +  LP S+  L  LE L +  N+L+ LP  +  +  L  L L+ N L+ L + 
Sbjct: 44  LNIEDNRLKDLPDSLANLGQLEWLDISDNRLSPLPKVLFQLRKLNWLDLSNNGLSELGEE 103

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           LA  ++L  LDL++N+L ELP    +L +L+ L L  N++  +      L  L  L + +
Sbjct: 104 LAAWEELMRLDLKNNQLQELPNNFGQLKALRKLLLERNQLSALPASFGQLQQLQQLDLSE 163

Query: 226 NKIRELPPELGELKNLVTLDLAHN-----------------------HLEELPKEIGNCT 262
           N   +LP E+G+LK L  L ++ N                        LEE+P+EIG   
Sbjct: 164 NAFTQLPEEIGQLKALKQLSISANPMPQLAKVLGQLSNLEELQAEGLGLEEVPEEIGQLN 223

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE------ 316
            L +L L +N L ++   LG+   L +L L  NRLE +P  L++C  L   N+E      
Sbjct: 224 NLQSLFLGYNRLKSLAANLGSCSALEQLDLGNNRLEKLPLNLARCQQLKVLNLEDNPLGE 283

Query: 317 -----------------GCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVY 359
                             C L +L  GL  SL +++ + LS N+    PS    Q T++ 
Sbjct: 284 LPLFLQEIQALEELDMSNCNLVNLGAGL--SLPALHWLDLSANQLRDLPSNF-GQLTALS 340

Query: 360 SINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS 419
            ++   NQ+ K P  +      + ++ +  N L  + L    W  L EL+L  N++++LS
Sbjct: 341 WLDLRDNQLQKWPKAL-EELSQIRQLLLAGNFLRQINLSELDWPELEELDLSKNELTELS 399

Query: 420 EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLIL 479
                L  L  L L  N L +LP     L  L+ LDL +N+L+SLP  +G L ++Q L L
Sbjct: 400 GQWDKLPQLRQLNLEKNQLAQLPEDWQPLSNLEELDLSDNQLDSLPQSLGKLDQIQWLDL 459

Query: 480 QSNQLVSLPRAIGHLT-NLSYLSVGENN 506
           ++NQ    P+A+  L   L  L + ENN
Sbjct: 460 RNNQFTEFPQALLPLVGQLQALYLSENN 487



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 154/316 (48%), Gaps = 27/316 (8%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           K+L  LD +   L+ELP+EIG    +  L+++ N L ++PD L NL  L  L +S NRL 
Sbjct: 16  KSLKKLDASRKGLQELPREIGRSKGMKQLNIEDNRLKDLPDSLANLGQLEWLDISDNRLS 75

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
            +P+ L +   LN  ++    LS L + L +                         +  +
Sbjct: 76  PLPKVLFQLRKLNWLDLSNNGLSELGEELAA-------------------------WEEL 110

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
             ++ ++NQ+ ++P   F + K L K+ ++ N L++LP   G    L +L+L  N  ++L
Sbjct: 111 MRLDLKNNQLQELPNN-FGQLKALRKLLLERNQLSALPASFGQLQQLQQLDLSENAFTQL 169

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
            E+I  L  L+ L +S N + +L   +G L  L+ L  E   LE +P EIG L  LQ L 
Sbjct: 170 PEEIGQLKALKQLSISANPMPQLAKVLGQLSNLEELQAEGLGLEEVPEEIGQLNNLQSLF 229

Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFEL 538
           L  N+L SL   +G  + L  L +G N L+ +P  +   + L  L L DN  L  +P  L
Sbjct: 230 LGYNRLKSLAANLGSCSALEQLDLGNNRLEKLPLNLARCQQLKVLNLEDNP-LGELPLFL 288

Query: 539 ALCSNLQIMSLDNCPL 554
                L+ + + NC L
Sbjct: 289 QEIQALEELDMSNCNL 304



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 137/303 (45%), Gaps = 52/303 (17%)

Query: 112 SITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQ 171
            +  +P  + +L +L+ L+L  N+L SL + +G  + L  L L  N L  LP +LA  QQ
Sbjct: 211 GLEEVPEEIGQLNNLQSLFLGYNRLKSLAANLGSCSALEQLDLGNNRLEKLPLNLARCQQ 270

Query: 172 LRVLDLRHNKLNELPMVVYKLTSLK----------------------ILYLRFNRIKTVH 209
           L+VL+L  N L ELP+ + ++ +L+                       L L  N+++ + 
Sbjct: 271 LKVLNLEDNPLGELPLFLQEIQALEELDMSNCNLVNLGAGLSLPALHWLDLSANQLRDLP 330

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKN-----------------------LVTLDL 246
            +   L+ LS L +RDN++++ P  L EL                         L  LDL
Sbjct: 331 SNFGQLTALSWLDLRDNQLQKWPKALEELSQIRQLLLAGNFLRQINLSELDWPELEELDL 390

Query: 247 AHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK 306
           + N L EL  +      L  L+L+ N+L  +P+    L NL  L LS N+L+S+P++L K
Sbjct: 391 SKNELTELSGQWDKLPQLRQLNLEKNQLAQLPEDWQPLSNLEELDLSDNQLDSLPQSLGK 450

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
              +   ++     +  P  LL  +  +  + LS N ++           +++  +FE  
Sbjct: 451 LDQIQWLDLRNNQFTEFPQALLPLVGQLQALYLSENNWSESA-------LALWKTHFEEV 503

Query: 367 QID 369
            +D
Sbjct: 504 IVD 506


>gi|29791785|gb|AAH50692.1| ERBB2IP protein, partial [Homo sapiens]
          Length = 633

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 198/417 (47%), Gaps = 29/417 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P  +     L I+    N I  +      
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ 136

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  N L+ LPK +   T L  LDL  NE 
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEF 196

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  L  L    +  NRL  +P                        G + SL  +
Sbjct: 197 TEVPEVLEQLSGLKEFWMDANRLTFIP------------------------GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N       G  T   ++  +    N + ++P  I S  KN++ + + +N L  
Sbjct: 233 TYLDVSKNNIEMVEEGIST-CENLQDLLLSSNSLQQLPETIGS-LKNITTLKIDENQLMY 290

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G  + + EL+   N++  L   I  L NL      +N L++LP  IG+ + +  L
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
            L  NKLE+LP E+G +++L+ + L  N+L +LP +   L  L+ + + +N  QS P
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN--QSKP 405



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 194/386 (50%), Gaps = 28/386 (7%)

Query: 174 VLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            LD  H  L ++P  ++    +L+ LYL  N+I+ +   +    +L  LS+ DN +  LP
Sbjct: 26  TLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLP 85

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             +  L NL  LD++ N ++E P+ I NC +L  ++   N +  +PD    L+NLT+L L
Sbjct: 86  ASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYL 145

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           +   LE +P    +   L    +    L  LP  + + LT +  + L  N+FT  P    
Sbjct: 146 NDAFLEFLPANFGRLTKLQILELRENQLKMLPKTM-NRLTQLERLDLGSNEFTEVPE--- 201

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                                 +  +   L +  M  N LT +P  +G+   LT L++  
Sbjct: 202 ----------------------VLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSK 239

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N I  + E I    NL+ L+LS+N L++LP +IG+L+ +  L ++EN+L  LP+ IG L 
Sbjct: 240 NNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLI 299

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            ++ L    N++ +LP +IG LTNL   +   N LQ +P EIG+ +N+  L+L+ N  L 
Sbjct: 300 SVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNK-LE 358

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIP 558
            +P E+     L++++L +  L  +P
Sbjct: 359 TLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 185/390 (47%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ I   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 93  NLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEF 152

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +L++L+LR N+L  LP  + +LT L+ L L  N    V   ++ LS L   
Sbjct: 153 LPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEF 212

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M  N++  +P  +G LK L  LD++ N++E + + I  C  L  L L  N L  +P+ +
Sbjct: 213 WMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI 272

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G+L N+T L++  N+L  +P++                        +  L S+  +  S 
Sbjct: 273 GSLKNITTLKIDENQLMYLPDS------------------------IGGLISVEELDCSF 308

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+  A PS    Q T++ +   +HN + ++P  I S  KN++ + +  N L +LP ++G 
Sbjct: 309 NEVEALPSSI-GQLTNLRTFAADHNYLQQLPPEIGS-WKNITVLFLHSNKLETLPEEMG- 365

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
                              D+Q    L+V+ LS+N LK LP S   L++L  + L +N+ 
Sbjct: 366 -------------------DMQ---KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQS 403

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           + L P +     E Q+++L +      PR 
Sbjct: 404 KPLIPLQKETDSETQKMVLTNYMFPQQPRT 433


>gi|260788688|ref|XP_002589381.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
 gi|229274558|gb|EEN45392.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
          Length = 1697

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 221/477 (46%), Gaps = 50/477 (10%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + +  LD   +++T LP ++  L  L  LY+Y NKL++LP  +  +  LT L +  N LT
Sbjct: 59  QKLYRLDADYNTLTSLPQAIGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLT 118

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
             P  + +L  L VL++ +NKL   P VV KL  L+ LY+  N++  V P +  L NL +
Sbjct: 119 GFPSGVCSLPNLEVLEVSYNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEV 178

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+ +NK+   PP + +L+ L  L +  N L E+P   G C+                  
Sbjct: 179 LSVSNNKLSTFPPGVEKLQKLRELYIYGNQLTEVPS--GVCS------------------ 218

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
              L NL  L +  N L + P  + K   L E  + G  L+ +P G +  L +I  +++S
Sbjct: 219 ---LPNLEVLSVYNNNLSTFPPGVEKLQKLRELRIYGNQLTEVPPG-VCLLPNIEWLSVS 274

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N  + +P GG                          + + L ++ + DN LT +P  + 
Sbjct: 275 NNNLSTFPPGG-------------------------EKLQKLRELYINDNQLTEVPSGVC 309

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
           +   L  L +G N I  L + +  L  L+ L + N  L + P  +  L+ L+ L     K
Sbjct: 310 SLPNLEVLGVGKNPIRSLPDYVTRLARLKTLSVPNCQLDEFPRQVLQLKTLEELYAGGCK 369

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
            + +P+E+G L+ L  L L  N L +LP  + HL NL  + + +N   + PE +  L  +
Sbjct: 370 FDIVPDEVGSLQHLWYLALDKNLLKTLPSTMSHLHNLREVYLDDNKFGTFPEVLCELPAM 429

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQG 577
             L ++ N  +  +P  L     L+ + +   PL+  P ++   G   I+ +LK + 
Sbjct: 430 EKLDISKNN-ITRLPTALHRADKLKHLDVSGNPLTYPPQDVCKQGTGAIMAFLKQEA 485



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 204/439 (46%), Gaps = 49/439 (11%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+  L++S + + + PP VEKL  L  LY+ GN+L  +P  +  + NL  L ++ N
Sbjct: 125 CSLPNLEVLEVSYNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVLSVSNN 184

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L++ P  +  LQ+LR L +  N+L E+P  V  L +L++L +  N + T  P ++ L  
Sbjct: 185 KLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYNNNLSTFPPGVEKLQK 244

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N++ E+PP +  L N+  L +++N+L   P        L  L +  N+L  +
Sbjct: 245 LRELRIYGNQLTEVPPGVCLLPNIEWLSVSNNNLSTFPPGGEKLQKLRELYINDNQLTEV 304

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  + +L NL  L +  N + S+P+ +++   L   +V  C L   P  +L  L ++  +
Sbjct: 305 PSGVCSLPNLEVLGVGKNPIRSLPDYVTRLARLKTLSVPNCQLDEFPRQVL-QLKTLEEL 363

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
                KF   P                    D++        ++L  + +  NLL +LP 
Sbjct: 364 YAGGCKFDIVP--------------------DEV-----GSLQHLWYLALDKNLLKTLPS 398

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
            +     L E+ L  N+     E +  L  +E L +S N + +LP+++    KLK LD+ 
Sbjct: 399 TMSHLHNLREVYLDDNKFGTFPEVLCELPAMEKLDISKNNITRLPTALHRADKLKHLDVS 458

Query: 458 ENKLESLPNEI---------GFLKE-----------LQRLILQSNQLVSLP--RAIGHLT 495
            N L   P ++          FLK+             RL ++++Q    P  R++G L+
Sbjct: 459 GNPLTYPPQDVCKQGTGAIMAFLKQEAEKDERILRAFNRLSVKASQTQWKPLARSLG-LS 517

Query: 496 NLSYLSVGENNLQSIPEEI 514
           N +  ++  +    +P+++
Sbjct: 518 NRAMDAIKASAPDDVPDQV 536



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 198/449 (44%), Gaps = 56/449 (12%)

Query: 85   IQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIG 144
            + A LN++ + +  +    L LDLS   +T +P  V  +T LE L +  NKL S+P  IG
Sbjct: 912  MAAGLNLQPQTVNGR----LKLDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTSIPEAIG 967

Query: 145  YVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR 204
             +  L  L    N LTSLP ++ +LQ+L  L +  N+L E+P  V  L +L++L +  N+
Sbjct: 968  RLQKLYRLDADGNMLTSLPQAIGSLQKLIHLYIYDNQLTEVPSGVCSLPNLEVLNVYNNK 1027

Query: 205  IKTVHPDIQYLS--------------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
            + T  P ++ L               NL +LS+ +NK+   PP + +L+ L  L +  N 
Sbjct: 1028 LSTFPPGVEKLQKLGTLYINGVCLLPNLEVLSVGNNKLSTFPPGVEKLQKLRELYIRDNQ 1087

Query: 251  LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
            L E+P  + +   L  L +  N +  +PD +  L  L  L +S  +    P  + +   +
Sbjct: 1088 LTEVPSGVCSLPNLEVLSVGKNPIRRLPDYVTRLARLKTLSVSNCQFAEFPRQVQQLKIM 1147

Query: 311  NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK 370
             E    GC    +PD  + SL  +  + L +N     PS                     
Sbjct: 1148 EELYAGGCKFDIVPDE-VGSLQHLQVLALDKNLLKTLPS--------------------- 1185

Query: 371  IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
                  S   NL +V + DN   + P  L     + +L++  N I++L   +     L+ 
Sbjct: 1186 ----TMSHLHNLREVYLDDNKFGTFPEVLCELPAMEKLDISKNNITRLPTALHRADKLKH 1241

Query: 431  LVLSNNLLKKLPSSI---GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
            L +S N L   P  +   G    +  L  E  K E +      L+   RL ++++Q    
Sbjct: 1242 LDVSGNPLTYPPQDVCKQGTGAIMAFLKQEAEKDERI------LRVFNRLSVKASQTQWK 1295

Query: 488  P--RAIGHLTNLSYLSVGENNLQSIPEEI 514
            P  R++G L+N +  ++  +    +P+++
Sbjct: 1296 PLARSLG-LSNRAMDAIKASAPDDVPDQV 1323



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 178/369 (48%), Gaps = 48/369 (13%)

Query: 236  GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
            G LK    LDL++  L  +P+E+ + T L  LD+ +N+L +IP+ +G L  L RL    N
Sbjct: 925  GRLK----LDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTSIPEAIGRLQKLYRLDADGN 980

Query: 296  RLESVPE---TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
             L S+P+   +L K +HL  ++ +   L+ +P G+  SL ++  + +  NK + +P G  
Sbjct: 981  MLTSLPQAIGSLQKLIHLYIYDNQ---LTEVPSGV-CSLPNLEVLNVYNNKLSTFPPGVE 1036

Query: 353  --TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
               +  ++Y      N +  +P        NL  +++ +N L++ P  +     L EL +
Sbjct: 1037 KLQKLGTLYI-----NGVCLLP--------NLEVLSVGNNKLSTFPPGVEKLQKLRELYI 1083

Query: 411  GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
              NQ++++   + +L NLEVL +  N +++LP  +  L +LK L +   +    P ++  
Sbjct: 1084 RDNQLTEVPSGVCSLPNLEVLSVGKNPIRRLPDYVTRLARLKTLSVSNCQFAEFPRQVQQ 1143

Query: 471  LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT- 529
            LK ++ L     +   +P  +G L +L  L++ +N L+++P  +  L NL  +YL+DN  
Sbjct: 1144 LKIMEELYAGGCKFDIVPDEVGSLQHLQVLALDKNLLKTLPSTMSHLHNLREVYLDDNKF 1203

Query: 530  -------C--------------LNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSL 568
                   C              +  +P  L     L+ + +   PL+  P ++   G   
Sbjct: 1204 GTFPEVLCELPAMEKLDISKNNITRLPTALHRADKLKHLDVSGNPLTYPPQDVCKQGTGA 1263

Query: 569  IIRYLKMQG 577
            I+ +LK + 
Sbjct: 1264 IMAFLKQEA 1272



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 92/172 (53%), Gaps = 10/172 (5%)

Query: 390  NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
            N+   L L   T  G  +L+L    ++ + E++ ++ +LEVL +SNN L  +P +IG L+
Sbjct: 911  NMAAGLNLQPQTVNGRLKLDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTSIPEAIGRLQ 970

Query: 450  KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            KL  LD + N L SLP  IG L++L  L +  NQL  +P  +  L NL  L+V  N L +
Sbjct: 971  KLYRLDADGNMLTSLPQAIGSLQKLIHLYIYDNQLTEVPSGVCSLPNLEVLNVYNNKLST 1030

Query: 510  IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             P  +  L+ L TLY+N           + L  NL+++S+ N  LS  P  +
Sbjct: 1031 FPPGVEKLQKLGTLYING----------VCLLPNLEVLSVGNNKLSTFPPGV 1072



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 91/181 (50%), Gaps = 24/181 (13%)

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           G  +L+L    ++ + E++ ++ +LE L +SNN L  +P ++G L+KL  LD + N L S
Sbjct: 14  GRLKLDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAVGRLQKLYRLDADYNTLTS 73

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN---- 519
           LP  IG L++L  L +  N+L +LP  +  L  L+ L +G N L   P  + +L N    
Sbjct: 74  LPQAIGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFPSGVCSLPNLEVL 133

Query: 520 -------------------LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
                              L TLY+N N  L  +P  + L  NL+++S+ N  LS  P  
Sbjct: 134 EVSYNKLPNFPPVVEKLQKLRTLYINGNQ-LTEVPPGVCLLPNLEVLSVSNNKLSTFPPG 192

Query: 561 I 561
           +
Sbjct: 193 V 193


>gi|332233712|ref|XP_003266047.1| PREDICTED: protein LAP2 isoform 2 [Nomascus leucogenys]
          Length = 1301

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|421118974|ref|ZP_15579301.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348314|gb|EKO99140.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 379

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/313 (37%), Positives = 178/313 (56%), Gaps = 4/313 (1%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLDL+ N  + LPKEIG    L  L+L  N+L  +P  +G L NL +L LS N+++++P+
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + K   L    +    L++LP  +   L  +  + L +N+ T  P     Q  ++ S+N
Sbjct: 112 EIEKLQKLQSLYLPNNQLTTLPQEI-GQLQKLQWLYLPKNQLTTLPQE-IGQLKNLKSLN 169

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQI  IP  I  + + L  + + +N LT+LP ++G    L  L L  NQ++ L ++I
Sbjct: 170 LSYNQIKTIPKEI-EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLYLPNNQLTTLPQEI 228

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            +L NL+ L L +N L  LP+ IG L+ L+ L+L  N+L +L  EI  L+ L+ L L+SN
Sbjct: 229 GHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 288

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL + P+ I  L NL  L +G N L ++PE IG L+NL TL L+ N  L  +P E+    
Sbjct: 289 QLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQ-LTTLPQEIGQLQ 347

Query: 543 NLQIMSLDNCPLS 555
           NLQ + L+N  LS
Sbjct: 348 NLQELFLNNNQLS 360



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 118/310 (38%), Positives = 172/310 (55%), Gaps = 7/310 (2%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+ + LP E+G+LKNL  L+L  N L  LPKEIG    L  L+L  N++  IP  
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNIT 338
           +  L  L  L L  N+L ++P+ + +   L    +    L++LP   G L +L S+N   
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLN--- 169

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           LS N+    P     +   + S+  ++NQ+  +P  I  + +NL  + + +N LT+LP +
Sbjct: 170 LSYNQIKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEI-GQLQNLQSLYLPNNQLTTLPQE 227

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L +L L +NQ++ L  +I  L NL+ L L NN L  L   I  L+ LK LDL  
Sbjct: 228 IGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRS 287

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L + P EI  LK LQ L L SNQL +LP  IG L NL  L +  N L ++P+EIG L+
Sbjct: 288 NQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQ 347

Query: 519 NLHTLYLNDN 528
           NL  L+LN+N
Sbjct: 348 NLQELFLNNN 357



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/350 (34%), Positives = 184/350 (52%), Gaps = 26/350 (7%)

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           T L  +L N  ++R LDL  N+   LP  + KL +L+ L L  N++  +  +I  L NL 
Sbjct: 38  TDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 97

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L++  N+I+ +P E+ +L+ L +L L +N L  LP+EIG    L  L L  N+L  +P 
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ 157

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +G L NL  L LSYN+++++P+ + K   L    ++   L++LP  +            
Sbjct: 158 EIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI------------ 205

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
                         Q  ++ S+   +NQ+  +P  I    +NL  + +  N LT LP ++
Sbjct: 206 -------------GQLQNLQSLYLPNNQLTTLPQEI-GHLQNLQDLYLVSNQLTILPNEI 251

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G    L  LNL  N+++ LS++I+ L NL+ L L +N L   P  I  L+ L+ LDL  N
Sbjct: 252 GQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSN 311

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
           +L +LP  IG LK LQ L L SNQL +LP+ IG L NL  L +  N L S
Sbjct: 312 QLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 361



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 175/311 (56%), Gaps = 3/311 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS +    LP  + KL +L+EL L  N+L  LP +IG + NL  L L+ N + ++P  
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L+ L L +N+L  LP  + +L  L+ LYL  N++ T+  +I  L NL  L++  
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I+ +P E+ +L+ L +L L +N L  LP+EIG    L +L L +N+L  +P  +G+L 
Sbjct: 173 NQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLYLPNNQLTTLPQEIGHLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L  +P  + +  +L   N+    L++L    +  L ++ ++ L  N+ T
Sbjct: 233 NLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKE-IEQLQNLKSLDLRSNQLT 291

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P     Q  ++  ++   NQ+  +P GI  + KNL  +++  N LT+LP ++G    L
Sbjct: 292 TFPK-EIEQLKNLQVLDLGSNQLTTLPEGI-GQLKNLQTLDLDSNQLTTLPQEIGQLQNL 349

Query: 406 TELNLGTNQIS 416
            EL L  NQ+S
Sbjct: 350 QELFLNNNQLS 360



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 182/330 (55%), Gaps = 7/330 (2%)

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
            + T L  +++    +  L L  N+  +LP +IG + NL  L L +N LT LP  +  L+
Sbjct: 35  GTYTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLK 94

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
            LR L+L  N++  +P  + KL  L+ LYL  N++ T+  +I  L  L  L +  N++  
Sbjct: 95  NLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTT 154

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+G+LKNL +L+L++N ++ +PKEI     L +L L +N+L  +P  +G L NL  L
Sbjct: 155 LPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 214

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTAYP 348
            L  N+L ++P+ +    +L +  +    L+ LP+  G L +L ++N   L  N+ T   
Sbjct: 215 YLPNNQLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLN---LRNNRLTTL- 270

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
           S    Q  ++ S++   NQ+   P  I  + KNL  +++  N LT+LP  +G    L  L
Sbjct: 271 SKEIEQLQNLKSLDLRSNQLTTFPKEI-EQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTL 329

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
           +L +NQ++ L ++I  L NL+ L L+NN L
Sbjct: 330 DLDSNQLTTLPQEIGQLQNLQELFLNNNQL 359



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 140/249 (56%), Gaps = 1/249 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS + I  +P  +EKL  L+ LYL  N+L +LP +IG +  L  L L +N LT
Sbjct: 94  KNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT 153

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L+ L+L +N++  +P  + KL  L+ L L  N++ T+  +I  L NL  
Sbjct: 154 TLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQS 213

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++  LP E+G L+NL  L L  N L  LP EIG    L TL+L++N L  +   
Sbjct: 214 LYLPNNQLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKE 273

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  N+L + P+ + +  +L   ++    L++LP+G +  L ++  + L 
Sbjct: 274 IEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEG-IGQLKNLQTLDLD 332

Query: 341 RNKFTAYPS 349
            N+ T  P 
Sbjct: 333 SNQLTTLPQ 341



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/212 (40%), Positives = 124/212 (58%), Gaps = 5/212 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L+LS + I  +P  +EKL  L+ L L  N+L +LP +IG + NL  L L  N LT
Sbjct: 163 KNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLYLPNNQLT 222

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  + +LQ L+ L L  N+L  LP  + +L +L+ L LR NR+ T+  +I+ L NL  
Sbjct: 223 TLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKS 282

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +R N++   P E+ +LKNL  LDL  N L  LP+ IG    L TLDL  N+L  +P  
Sbjct: 283 LDLRSNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 342

Query: 281 LGNLINLTRLRLSYNRLES-----VPETLSKC 307
           +G L NL  L L+ N+L S     + + L KC
Sbjct: 343 IGQLQNLQELFLNNNQLSSQEKKRIRKLLPKC 374



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/204 (39%), Positives = 122/204 (59%), Gaps = 2/204 (0%)

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           V +++   N+   +P  I  + KNL ++N+  N LT LP ++G    L +LNL  NQI  
Sbjct: 50  VRTLDLSANRFKTLPKEI-GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKT 108

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ++I+ L  L+ L L NN L  LP  IG L+KL+ L L +N+L +LP EIG LK L+ L
Sbjct: 109 IPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSL 168

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L  NQ+ ++P+ I  L  L  L +  N L ++P+EIG L+NL +LYL +N  L  +P E
Sbjct: 169 NLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLYLPNNQ-LTTLPQE 227

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    NLQ + L +  L+ +P+EI
Sbjct: 228 IGHLQNLQDLYLVSNQLTILPNEI 251



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 124/217 (57%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L K+ +T LP  + +L +L+ L L  N++ ++P +I  +  L  LGL  N LT+LP  
Sbjct: 145 LYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQE 204

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ L L +N+L  LP  +  L +L+ LYL  N++  +  +I  L NL  L++R+
Sbjct: 205 IGQLQNLQSLYLPNNQLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 264

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  L  E+ +L+NL +LDL  N L   PKEI     L  LDL  N+L  +P+ +G L 
Sbjct: 265 NRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQLK 324

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           NL  L L  N+L ++P+ + +  +L E  +    LSS
Sbjct: 325 NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 361



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 108/176 (61%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K + + +L L  + +T LP  + +L +L+ LYL  N+L +LP +IG++ NL  L L  N 
Sbjct: 184 KLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLYLPNNQLTTLPQEIGHLQNLQDLYLVSNQ 243

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT LP+ +  L+ L+ L+LR+N+L  L   + +L +LK L LR N++ T   +I+ L NL
Sbjct: 244 LTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQLKNL 303

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
            +L +  N++  LP  +G+LKNL TLDL  N L  LP+EIG    L  L L +N+L
Sbjct: 304 QVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 359



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 92/169 (54%), Gaps = 24/169 (14%)

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK--- 472
           + L++ +QN + +  L LS N  K LP  IG L+ L+ L+L +N+L  LP EIG LK   
Sbjct: 38  TDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 97

Query: 473 --------------------ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
                               +LQ L L +NQL +LP+ IG L  L +L + +N L ++P+
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ 157

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           EIG L+NL +L L+ N  +  IP E+     LQ + LDN  L+ +P EI
Sbjct: 158 EIGQLKNLKSLNLSYNQ-IKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI 205



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 1/92 (1%)

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
           F+ ELQ    +S     L +A+ +   +  L +  N  +++P+EIG L+NL  L LN N 
Sbjct: 23  FIYELQAEESESGTYTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQ 82

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L  +P E+    NL+ ++L    +  IP EI
Sbjct: 83  -LTILPKEIGQLKNLRKLNLSANQIKTIPKEI 113


>gi|345310727|ref|XP_001521360.2| PREDICTED: leucine-rich repeat and death domain-containing protein
           1-like, partial [Ornithorhynchus anatinus]
          Length = 746

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 210/434 (48%), Gaps = 4/434 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L +  +T LPP + +L +L  L +  N++ASLP ++G +  L  L    N L   P  
Sbjct: 223 LCLERIDLTCLPPEIGQLANLRVLNIDHNQIASLPKEVGRLVGLRQLFCGHNLLEEFPAV 282

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L  L+ L +LDL  N L  +P  + +L  L++L+L  N+++     + YL  L+ LS+  
Sbjct: 283 LGGLENLDILDLAGNNLKSVPESITRLQRLQVLHLDSNQLEIFPKALCYLPKLTGLSLSG 342

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N I  LP ++ EL+NL  L + HN L  LP +      L  + L  N+L ++   +GNL 
Sbjct: 343 NAISSLPKDIKELRNLEELAMNHNQLTFLPGQFFQLLKLREVHLGSNKLESLSPSIGNLQ 402

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L  N  +++ E +  C  L + ++ G  L+ LP      L  +  + + RN+  
Sbjct: 403 ELRVLLLWDNLFKTITEKIGTCSLLEKLDLRGNGLTQLPPN-FRRLQKLKELYVGRNQLG 461

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                  ++   +  +    N I  +P  I      L++V++  N L   PL L     L
Sbjct: 462 RLEE-HISRLKDLSVLEISGNGIAHVPVEI-KNCGQLTRVDLSANELGQFPLGLTALAAL 519

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             LNL  N+IS++ E+I  +  L  L L  N L    + +  LRKL  LDL +N +  +P
Sbjct: 520 NYLNLNGNEISEIPEEISEMERLIHLELRQNRLTSFSNYLCRLRKLSYLDLGKNGISGIP 579

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
             +  +  L+ LIL  N+  + P+ +  L  L  L + EN +Q IP +I  L+ +  L  
Sbjct: 580 PAVSNMLSLRDLILDYNRFSAFPKELCSLKGLETLDLSENQIQCIPLKICNLQRIRRLDF 639

Query: 526 NDNTCLNNIPFELA 539
           ++N    + P EL 
Sbjct: 640 SNNQ-FGSFPVELC 652



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 143/496 (28%), Positives = 232/496 (46%), Gaps = 55/496 (11%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           +LN+D   + I  LP  V +L  L +L+   N L   P+ +G + NL  L LA N+L S+
Sbjct: 245 VLNID--HNQIASLPKEVGRLVGLRQLFCGHNLLEEFPAVLGGLENLDILDLAGNNLKSV 302

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+S+  LQ+L+VL L  N+L   P  +  L  L  L L  N I ++  DI+ L NL  L+
Sbjct: 303 PESITRLQRLQVLHLDSNQLEIFPKALCYLPKLTGLSLSGNAISSLPKDIKELRNLEELA 362

Query: 223 MRDNKIRELP-----------------------PELGELKNLVTLDLAHNHLEELPKEIG 259
           M  N++  LP                       P +G L+ L  L L  N  + + ++IG
Sbjct: 363 MNHNQLTFLPGQFFQLLKLREVHLGSNKLESLSPSIGNLQELRVLLLWDNLFKTITEKIG 422

Query: 260 NCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA 319
            C++L  LDL+ N L  +P     L  L  L +  N+L  + E +S+   L+   + G  
Sbjct: 423 TCSLLEKLDLRGNGLTQLPPNFRRLQKLKELYVGRNQLGRLEEHISRLKDLSVLEISGNG 482

Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           ++ +P   + +   +  + LS N+   +P  G T   ++  +N   N+I +IP  I S  
Sbjct: 483 IAHVPVE-IKNCGQLTRVDLSANELGQFPL-GLTALAALNYLNLNGNEISEIPEEI-SEM 539

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           + L  + ++ N LTS    L     L+ L+LG N IS +   + N+++L  L+L  N   
Sbjct: 540 ERLIHLELRQNRLTSFSNYLCRLRKLSYLDLGKNGISGIPPAVSNMLSLRDLILDYNRFS 599

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP----------- 488
             P  + +L+ L+ LDL EN+++ +P +I  L+ ++RL   +NQ  S P           
Sbjct: 600 AFPKELCSLKGLETLDLSENQIQCIPLKICNLQRIRRLDFSNNQFGSFPVELCALTTLEE 659

Query: 489 --------RAIGH-------LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
                   R   H       LT L  L + +N ++ +P  IG L +L  L L  N  +  
Sbjct: 660 LLLSQNRGRKFTHLPEQLTALTGLKELDISDNAIKELPRNIGELRSLVRL-LARNNAVGC 718

Query: 534 IPFELALCSNLQIMSL 549
           +P    L   LQ + +
Sbjct: 719 LPPSFRLLHGLQQLDM 734



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 195/406 (48%), Gaps = 29/406 (7%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C    +  L LS ++I+ LP  +++L +LEEL +  N+L  LP Q   +  L  + L  N
Sbjct: 330 CYLPKLTGLSLSGNAISSLPKDIKELRNLEELAMNHNQLTFLPGQFFQLLKLREVHLGSN 389

Query: 158 SLTSLPDSLANLQQLRV-----------------------LDLRHNKLNELPMVVYKLTS 194
            L SL  S+ NLQ+LRV                       LDLR N L +LP    +L  
Sbjct: 390 KLESLSPSIGNLQELRVLLLWDNLFKTITEKIGTCSLLEKLDLRGNGLTQLPPNFRRLQK 449

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           LK LY+  N++  +   I  L +LS+L +  N I  +P E+     L  +DL+ N L + 
Sbjct: 450 LKELYVGRNQLGRLEEHISRLKDLSVLEISGNGIAHVPVEIKNCGQLTRVDLSANELGQF 509

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P  +     L  L+L  NE+  IP+ +  +  L  L L  NRL S    L +   L+  +
Sbjct: 510 PLGLTALAALNYLNLNGNEISEIPEEISEMERLIHLELRQNRLTSFSNYLCRLRKLSYLD 569

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +    +S +P   +S++ S+ ++ L  N+F+A+P         + +++   NQI  IP  
Sbjct: 570 LGKNGISGIPPA-VSNMLSLRDLILDYNRFSAFPK-ELCSLKGLETLDLSENQIQCIPLK 627

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN---QISKLSEDIQNLVNLEVL 431
           I +  + + +++  +N   S P++L     L EL L  N   + + L E +  L  L+ L
Sbjct: 628 ICN-LQRIRRLDFSNNQFGSFPVELCALTTLEELLLSQNRGRKFTHLPEQLTALTGLKEL 686

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
            +S+N +K+LP +IG LR L  L    N +  LP     L  LQ+L
Sbjct: 687 DISDNAIKELPRNIGELRSLVRLLARNNAVGCLPPSFRLLHGLQQL 732



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 26/238 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +DLS + +   P  +  L  L  L L GN+++ +P +I  +  L  L L +N LTS  + 
Sbjct: 499 VDLSANELGQFPLGLTALAALNYLNLNGNEISEIPEEISEMERLIHLELRQNRLTSFSNY 558

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L  L++L  LDL  N ++ +P  V  + SL+ L L +NR      ++  L  L  L + +
Sbjct: 559 LCRLRKLSYLDLGKNGISGIPPAVSNMLSLRDLILDYNRFSAFPKELCSLKGLETLDLSE 618

Query: 226 NKIRELPPELGELKNLVTLDLAHNHL--------------------------EELPKEIG 259
           N+I+ +P ++  L+ +  LD ++N                              LP+++ 
Sbjct: 619 NQIQCIPLKICNLQRIRRLDFSNNQFGSFPVELCALTTLEELLLSQNRGRKFTHLPEQLT 678

Query: 260 NCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
             T L  LD+  N +  +P  +G L +L RL    N +  +P +      L + ++ G
Sbjct: 679 ALTGLKELDISDNAIKELPRNIGELRSLVRLLARNNAVGCLPPSFRLLHGLQQLDMSG 736



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 20/196 (10%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C+   +  LDL K+ I+ +PP+V  +  L +L L  N+ ++ P ++  +  L  L L+EN
Sbjct: 560 CRLRKLSYLDLGKNGISGIPPAVSNMLSLRDLILDYNRFSAFPKELCSLKGLETLDLSEN 619

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            +  +P  + NLQ++R LD  +N+    P+ +  LT+L+ L L  NR +           
Sbjct: 620 QIQCIPLKICNLQRIRRLDFSNNQFGSFPVELCALTTLEELLLSQNRGR----------- 668

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
                    K   LP +L  L  L  LD++ N ++ELP+ IG    LV L  ++N +  +
Sbjct: 669 ---------KFTHLPEQLTALTGLKELDISDNAIKELPRNIGELRSLVRLLARNNAVGCL 719

Query: 278 PDMLGNLINLTRLRLS 293
           P     L  L +L +S
Sbjct: 720 PPSFRLLHGLQQLDMS 735


>gi|157135396|ref|XP_001656638.1| mitotic protein phosphatase 1 regulator, putative [Aedes aegypti]
 gi|108881267|gb|EAT45492.1| AAEL003228-PA [Aedes aegypti]
          Length = 608

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 145/517 (28%), Positives = 237/517 (45%), Gaps = 111/517 (21%)

Query: 100 EENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL 159
           ++ + NLDLS +++T +  +V+ L  L  L L  N L SLP  IG +T LT + ++ N L
Sbjct: 88  QKTLTNLDLSSNALTCISENVKNLGDLTVLNLQDNALTSLPDGIGCLTKLTKINISRNKL 147

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           T LP+S   L++L+VL+L HN  +E+   V  L  L++L + FN + ++   I +L  L 
Sbjct: 148 TELPESFFELKELKVLNLAHNDFSEIHSNVSDLIMLEVLDISFNSLNSLPGGIGFLVRLQ 207

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L++ +N++ ELP ++  L+NL  +DLA N L++LP  +G    L  L +QHN++V +PD
Sbjct: 208 QLTLNNNRLIELPNDIVNLRNLHKMDLAKNDLKQLPPVMGELRKLECLYVQHNDVVELPD 267

Query: 280 MLG----------------------------------------------NLINLTRLRLS 293
             G                                               L +LTRL LS
Sbjct: 268 FTGCDALKEIHISNNFIKSIPADFCENLPQLKVLDLRDNKIEKLPDEISMLASLTRLDLS 327

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
            N + S+P  LS   HL    VEG  + S+   ++   T    I  +  +      GGP 
Sbjct: 328 NNSISSLPSCLSTLAHLVSLQVEGNPIRSIRRDIIQCGTQ--RILKTLRERDGPGKGGPE 385

Query: 354 QF-----------------------------------------TSVYSINFEHNQIDKIP 372
                                                       SVY+++   N++ ++P
Sbjct: 386 NVKAPFEESTFPDVYQMKKGRSMIVSNKNLIDVPEQVFLDAAEASVYNVDISKNKLGEVP 445

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
            GI   A  L+++N+  NLL ++P+    +  ++ LN+  N ++ L E +  LV L  L 
Sbjct: 446 SGITHLADQLTELNISFNLLKTIPMFFSRFERISYLNISNNLLADLPEVVGLLVTLRELN 505

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESL-PNEIGFLKELQRLILQSNQLVSLPRAI 491
           ++NN LK++P S+  L+ L+ L   +NK+E +   E G              L +LPR  
Sbjct: 506 VANNQLKRIPPSVYELKGLEILLARDNKIEEIDATESG--------------LAALPR-- 549

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
                L+ L +  NN++ +P  +G L+N+ TL L  N
Sbjct: 550 -----LATLDLANNNIKQVPPVLGLLKNITTLELIGN 581



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 199/457 (43%), Gaps = 73/457 (15%)

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           LT L L+ N+LT + +++ NL  L VL+L+ N L  LP                      
Sbjct: 91  LTNLDLSSNALTCISENVKNLGDLTVLNLQDNALTSLP---------------------- 128

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
              I  L+ L+ +++  NK+ ELP    ELK L  L+LAHN   E+   + +  ML  LD
Sbjct: 129 -DGIGCLTKLTKINISRNKLTELPESFFELKELKVLNLAHNDFSEIHSNVSDLIMLEVLD 187

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
           +  N L ++P  +G L+ L +L L+ NRL  +P  +    +L++ ++    L  LP  ++
Sbjct: 188 ISFNSLNSLPGGIGFLVRLQQLTLNNNRLIELPNDIVNLRNLHKMDLAKNDLKQLP-PVM 246

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
             L  +  + +  N     P    T   ++  I+  +N I  IP         L  ++++
Sbjct: 247 GELRKLECLYVQHNDVVELPDF--TGCDALKEIHISNNFIKSIPADFCENLPQLKVLDLR 304

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI--- 445
           DN +  LP ++     LT L+L  N IS L   +  L +L  L +  N ++ +   I   
Sbjct: 305 DNKIEKLPDEISMLASLTRLDLSNNSISSLPSCLSTLAHLVSLQVEGNPIRSIRRDIIQC 364

Query: 446 GNLRKLKCL------------------------DLEENK-----------LESLPNEIGF 470
           G  R LK L                        D+ + K           L  +P ++ F
Sbjct: 365 GTQRILKTLRERDGPGKGGPENVKAPFEESTFPDVYQMKKGRSMIVSNKNLIDVPEQV-F 423

Query: 471 LKELQRLI----LQSNQLVSLPRAIGHLTN-LSYLSVGENNLQSIPEEIGTLENLHTLYL 525
           L   +  +    +  N+L  +P  I HL + L+ L++  N L++IP      E +   YL
Sbjct: 424 LDAAEASVYNVDISKNKLGEVPSGITHLADQLTELNISFNLLKTIPMFFSRFERIS--YL 481

Query: 526 N-DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N  N  L ++P  + L   L+ +++ N  L +IP  +
Sbjct: 482 NISNNLLADLPEVVGLLVTLRELNVANNQLKRIPPSV 518



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 91/166 (54%), Gaps = 4/166 (2%)

Query: 92  EKEFLRCKEENILNLDLSKSSITHLPPSVEKLT-HLEELYLYGNKLASLPSQIGYVTNLT 150
           E+ FL   E ++ N+D+SK+ +  +P  +  L   L EL +  N L ++P        ++
Sbjct: 420 EQVFLDAAEASVYNVDISKNKLGEVPSGITHLADQLTELNISFNLLKTIPMFFSRFERIS 479

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N L  LP+ +  L  LR L++ +N+L  +P  VY+L  L+IL  R N+I+ +  
Sbjct: 480 YLNISNNLLADLPEVVGLLVTLRELNVANNQLKRIPPSVYELKGLEILLARDNKIEEIDA 539

Query: 211 ---DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
               +  L  L+ L + +N I+++PP LG LKN+ TL+L  N   +
Sbjct: 540 TESGLAALPRLATLDLANNNIKQVPPVLGLLKNITTLELIGNGFRQ 585



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 1/143 (0%)

Query: 420 EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLIL 479
           E   N   L  L LS+N L  +  ++ NL  L  L+L++N L SLP+ IG L +L ++ +
Sbjct: 83  ESWWNQKTLTNLDLSSNALTCISENVKNLGDLTVLNLQDNALTSLPDGIGCLTKLTKINI 142

Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
             N+L  LP +   L  L  L++  N+   I   +  L  L  L ++ N+ LN++P  + 
Sbjct: 143 SRNKLTELPESFFELKELKVLNLAHNDFSEIHSNVSDLIMLEVLDISFNS-LNSLPGGIG 201

Query: 540 LCSNLQIMSLDNCPLSQIPSEIV 562
               LQ ++L+N  L ++P++IV
Sbjct: 202 FLVRLQQLTLNNNRLIELPNDIV 224


>gi|395735874|ref|XP_003776657.1| PREDICTED: protein LAP2 isoform 3 [Pongo abelii]
          Length = 1302

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|351711953|gb|EHB14872.1| Protein LAP2 [Heterocephalus glaber]
          Length = 1405

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 202/413 (48%), Gaps = 27/413 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTALPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N        G +   ++  +    N + ++P  + S  KN++ + + +N L  
Sbjct: 233 TYLDVSKNNIEMV-EEGISACENLQDLLLSSNSLQQLPETVGS-LKNVTTLKIDENQLMY 290

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G  + + EL+   N+I  L   +  L N+      +N L++LP  IGN + +  L
Sbjct: 291 LPDSIGGLISVEELDCSFNEIEALPSSVGQLTNIRTFAADHNYLQQLPGEIGNWKNVTVL 350

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
            L  NKLE+LP E+G +++L+ + L  N+L +LP +   L  L+ + + +N +
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQV 403



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 193/386 (50%), Gaps = 28/386 (7%)

Query: 174 VLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            LD  H  L ++P  ++    +L+ LYL  N+I+ +   +    +L  LS+ DN +  LP
Sbjct: 26  TLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALP 85

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             +  L NL  LD++ N ++E P+ I NC +L  ++   N +  +PD    L+NLT+L L
Sbjct: 86  ASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYL 145

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           +   LE +P    +   L    +    L  LP   ++ LT +  + L  N+FT  P    
Sbjct: 146 NDAFLEFLPANFGRLTKLQILELRENQLKMLPK-TMNRLTQLERLDLGSNEFTEVPE--- 201

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                                 +  +   L +  M  N LT +P  +G+   LT L++  
Sbjct: 202 ----------------------VLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSK 239

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N I  + E I    NL+ L+LS+N L++LP ++G+L+ +  L ++EN+L  LP+ IG L 
Sbjct: 240 NNIEMVEEGISACENLQDLLLSSNSLQQLPETVGSLKNVTTLKIDENQLMYLPDSIGGLI 299

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            ++ L    N++ +LP ++G LTN+   +   N LQ +P EIG  +N+  L+L+ N  L 
Sbjct: 300 SVEELDCSFNEIEALPSSVGQLTNIRTFAADHNYLQQLPGEIGNWKNVTVLFLHSNK-LE 358

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIP 558
            +P E+     L++++L +  L  +P
Sbjct: 359 TLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 166/321 (51%), Gaps = 11/321 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ +G+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETVGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLISVEELDCSFNEIEALPSSVGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP G + +  ++  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLP-GEIGNWKNVTVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDNLLTSLPLDLGT 401
            L+ + + DN ++ L  D  T
Sbjct: 392 QLTAMWLSDNQVSILIFDSET 412



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 184/389 (47%), Gaps = 53/389 (13%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ I   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 93  NLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEF 152

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +L++L+LR N+L  LP  + +LT L+ L L  N    V   ++ LS L   
Sbjct: 153 LPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEF 212

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M  N++  +P  +G LK L  LD++ N++E + + I  C  L  L L  N L  +P+ +
Sbjct: 213 WMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETV 272

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G+L N+T L++  N+L  +P+++   + + E +   C+                      
Sbjct: 273 GSLKNVTTLKIDENQLMYLPDSIGGLISVEELD---CSF--------------------- 308

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+  A PS    Q T++ +   +HN + ++P G     KN++ + +  N L +LP ++G 
Sbjct: 309 NEIEALPSSV-GQLTNIRTFAADHNYLQQLP-GEIGNWKNVTVLFLHSNKLETLPEEMG- 365

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
                              D+Q    L+V+ LS+N LK LP S   L++L  + L +N++
Sbjct: 366 -------------------DMQ---KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQV 403

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRA 490
             L     F  E Q+++L +      PR 
Sbjct: 404 SIL----IFDSETQKMVLTNYMFPQQPRT 428



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  +   ++ C NLQ + L +  L Q+P  +
Sbjct: 235 LDVSKNN-IEMVEEGISACENLQDLLLSSNSLQQLPETV 272


>gi|332233716|ref|XP_003266049.1| PREDICTED: protein LAP2 isoform 4 [Nomascus leucogenys]
          Length = 1345

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|55770895|ref|NP_001006600.1| protein LAP2 isoform 7 [Homo sapiens]
          Length = 1302

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|417781236|ref|ZP_12428988.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778487|gb|EKR63113.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 400

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 130/362 (35%), Positives = 197/362 (54%), Gaps = 19/362 (5%)

Query: 200 LRFNRIKTVHPDIQYLSN---LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPK 256
           L+   I T H   + L N   + +LS+ +N+   LP E+GEL+NL  L L++N L+ LPK
Sbjct: 23  LKAQEIGTYHNLTEALRNATDVRILSLHNNET--LPKEIGELQNLTKLYLSNNQLQALPK 80

Query: 257 EIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE 316
           EIG    L  L L +N+L  IP+ +G L  L  L L  N+L+++P+ + K   L    + 
Sbjct: 81  EIGKLKKLQVLTLNNNQLTTIPNEIGELKKLQVLYLDNNQLQALPKEIGKLKKLQVLYLN 140

Query: 317 GCALSSLPDGL-----LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
              L +LP  +     L  L S NN   +  K   Y         ++  +   +N++  +
Sbjct: 141 DNQLKTLPKEIEYLQKLRELDSTNNPLTTLPKEIGY-------LKNLEELILSNNELTTL 193

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + KNL  + +  +LLT+LP D+G    L +L L T +++ L  DI  L NL+ L
Sbjct: 194 PKEI-GKLKNLQVLYLGADLLTTLPNDIGYLKNLQKLYLNTGRLTTLPNDIGYLKNLQEL 252

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            LS+N LK LP+ IG L+ L+ L L  N+L +LP E G L+ L+ L L  NQL +LP+  
Sbjct: 253 YLSDNQLKTLPNDIGKLKNLQVLHLSGNQLTTLPKEFGKLQSLRELNLSGNQLTTLPKEF 312

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
           G L +L  L++  N L ++P+EIG L++L  L L+ N  L  +P E+    NLQ + LD+
Sbjct: 313 GKLQSLRELNLSGNQLTTLPKEIGKLQSLRELNLSGNQ-LTTLPKEIGHLKNLQELYLDD 371

Query: 552 CP 553
            P
Sbjct: 372 IP 373



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 115/320 (35%), Positives = 184/320 (57%), Gaps = 3/320 (0%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LP  + +L +L +LYL  N+L +LP +IG +  L  L L  N LT++P+ +  L++L+VL
Sbjct: 55  LPKEIGELQNLTKLYLSNNQLQALPKEIGKLKKLQVLTLNNNQLTTIPNEIGELKKLQVL 114

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
            L +N+L  LP  + KL  L++LYL  N++KT+  +I+YL  L  L   +N +  LP E+
Sbjct: 115 YLDNNQLQALPKEIGKLKKLQVLYLNDNQLKTLPKEIEYLQKLRELDSTNNPLTTLPKEI 174

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
           G LKNL  L L++N L  LPKEIG    L  L L  + L  +P+ +G L NL +L L+  
Sbjct: 175 GYLKNLEELILSNNELTTLPKEIGKLKNLQVLYLGADLLTTLPNDIGYLKNLQKLYLNTG 234

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
           RL ++P  +    +L E  +    L +LP+  +  L ++  + LS N+ T  P     + 
Sbjct: 235 RLTTLPNDIGYLKNLQELYLSDNQLKTLPND-IGKLKNLQVLHLSGNQLTTLPKEF-GKL 292

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
            S+  +N   NQ+  +P   F + ++L ++N+  N LT+LP ++G    L ELNL  NQ+
Sbjct: 293 QSLRELNLSGNQLTTLPKE-FGKLQSLRELNLSGNQLTTLPKEIGKLQSLRELNLSGNQL 351

Query: 416 SKLSEDIQNLVNLEVLVLSN 435
           + L ++I +L NL+ L L +
Sbjct: 352 TTLPKEIGHLKNLQELYLDD 371



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 132/382 (34%), Positives = 190/382 (49%), Gaps = 51/382 (13%)

Query: 146 VTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRI 205
            T++  L L  N   +LP  +  LQ L  L L +N+L  LP  + KL  L++L L  N++
Sbjct: 41  ATDVRILSLHNNE--TLPKEIGELQNLTKLYLSNNQLQALPKEIGKLKKLQVLTLNNNQL 98

Query: 206 KTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
            T+  +I  L  L +L + +N+++ LP E+G+LK L  L L  N L+ LPKEI     L 
Sbjct: 99  TTIPNEIGELKKLQVLYLDNNQLQALPKEIGKLKKLQVLYLNDNQLKTLPKEIEYLQKLR 158

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
            LD  +N L  +P  +G L NL  L LS N L ++P+ + K  +L    +    L++LP+
Sbjct: 159 ELDSTNNPLTTLPKEIGYLKNLEELILSNNELTTLPKEIGKLKNLQVLYLGADLLTTLPN 218

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
            +                                                    KNL K+
Sbjct: 219 DI-------------------------------------------------GYLKNLQKL 229

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
            +    LT+LP D+G    L EL L  NQ+  L  DI  L NL+VL LS N L  LP   
Sbjct: 230 YLNTGRLTTLPNDIGYLKNLQELYLSDNQLKTLPNDIGKLKNLQVLHLSGNQLTTLPKEF 289

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
           G L+ L+ L+L  N+L +LP E G L+ L+ L L  NQL +LP+ IG L +L  L++  N
Sbjct: 290 GKLQSLRELNLSGNQLTTLPKEFGKLQSLRELNLSGNQLTTLPKEIGKLQSLRELNLSGN 349

Query: 506 NLQSIPEEIGTLENLHTLYLND 527
            L ++P+EIG L+NL  LYL+D
Sbjct: 350 QLTTLPKEIGHLKNLQELYLDD 371



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/232 (39%), Positives = 132/232 (56%), Gaps = 2/232 (0%)

Query: 93  KEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCL 152
           KE  + K+  +L L+   + +  LP  +E L  L EL    N L +LP +IGY+ NL  L
Sbjct: 126 KEIGKLKKLQVLYLN--DNQLKTLPKEIEYLQKLRELDSTNNPLTTLPKEIGYLKNLEEL 183

Query: 153 GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
            L+ N LT+LP  +  L+ L+VL L  + L  LP  +  L +L+ LYL   R+ T+  DI
Sbjct: 184 ILSNNELTTLPKEIGKLKNLQVLYLGADLLTTLPNDIGYLKNLQKLYLNTGRLTTLPNDI 243

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
            YL NL  L + DN+++ LP ++G+LKNL  L L+ N L  LPKE G    L  L+L  N
Sbjct: 244 GYLKNLQELYLSDNQLKTLPNDIGKLKNLQVLHLSGNQLTTLPKEFGKLQSLRELNLSGN 303

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
           +L  +P   G L +L  L LS N+L ++P+ + K   L E N+ G  L++LP
Sbjct: 304 QLTTLPKEFGKLQSLRELNLSGNQLTTLPKEIGKLQSLRELNLSGNQLTTLP 355



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 166/310 (53%), Gaps = 33/310 (10%)

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           L + + N T +  L L +NE   +P  +G L NLT+L LS N+L+++P+ + K       
Sbjct: 34  LTEALRNATDVRILSLHNNE--TLPKEIGELQNLTKLYLSNNQLQALPKEIGK------- 84

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKI 371
                            L  +  +TL+ N+ T  P+  G   +   +Y    ++NQ+  +
Sbjct: 85  -----------------LKKLQVLTLNNNQLTTIPNEIGELKKLQVLY---LDNNQLQAL 124

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + K L  + + DN L +LP ++     L EL+   N ++ L ++I  L NLE L
Sbjct: 125 PKEI-GKLKKLQVLYLNDNQLKTLPKEIEYLQKLRELDSTNNPLTTLPKEIGYLKNLEEL 183

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
           +LSNN L  LP  IG L+ L+ L L  + L +LPN+IG+LK LQ+L L + +L +LP  I
Sbjct: 184 ILSNNELTTLPKEIGKLKNLQVLYLGADLLTTLPNDIGYLKNLQKLYLNTGRLTTLPNDI 243

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
           G+L NL  L + +N L+++P +IG L+NL  L+L+ N  L  +P E     +L+ ++L  
Sbjct: 244 GYLKNLQELYLSDNQLKTLPNDIGKLKNLQVLHLSGNQ-LTTLPKEFGKLQSLRELNLSG 302

Query: 552 CPLSQIPSEI 561
             L+ +P E 
Sbjct: 303 NQLTTLPKEF 312


>gi|395735870|ref|XP_002815652.2| PREDICTED: protein LAP2 isoform 1 [Pongo abelii]
          Length = 1371

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|395735872|ref|XP_003776656.1| PREDICTED: protein LAP2 isoform 2 [Pongo abelii]
          Length = 1419

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|395735876|ref|XP_003776658.1| PREDICTED: protein LAP2 isoform 4 [Pongo abelii]
          Length = 1346

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|332233710|ref|XP_003266046.1| PREDICTED: protein LAP2 isoform 1 [Nomascus leucogenys]
          Length = 1370

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|354469152|ref|XP_003496994.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1-like [Cricetulus griseus]
          Length = 855

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 234/462 (50%), Gaps = 5/462 (1%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L+ S + I+ +P  + +L ++ +L+L  N + +LPS +  + NL  L L +N LT+
Sbjct: 208 NLRILNASYNQISCIPKELLQLENMRQLFLNSNCIENLPSDLESLINLETLSLGKNMLTN 267

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P+SL++L+ L+VL+L +N+L      +  L  L  L L  N I ++  +I+ L NL  L
Sbjct: 268 VPESLSSLKNLQVLNLEYNQLTIFSKSLCFLPKLISLNLTGNMIGSLPKEIRELKNLENL 327

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M  NK+  L  E+ +L  +  L LA N LE +  +I N   L  L+L  N L  IP  L
Sbjct: 328 LMDHNKLTFLSVEIFQLPKIKELQLADNKLEAISPKIENFRELRILNLDKNLLKKIPKKL 387

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
              + L  L LS N +E +P  + +  +L + +V    +  + +  +S L++I ++  S 
Sbjct: 388 SRCVKLECLSLSDNSIEELPRKIHRLKNLKQLHVSRNKMIKMAEE-ISHLSNIISLEFSG 446

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+ T  P         +  +   +N I   P G+ +   +L  ++   N ++ +P+D+  
Sbjct: 447 NQITHIPI-EIKNCRKITRVELNYNNIMYFPVGLCA-LPSLDYLSFNGNYISEIPMDVSF 504

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L L TN++  LSE + +L NLE L +  N +K +PS I  +  L+ L +  NK 
Sbjct: 505 SKQLLHLELNTNKLPVLSEHLCSLTNLEYLDVGQNQIKTIPSCISTMVSLRVLIVSGNKF 564

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
           E+ P E+  L  LQ L +  NQL  LP  I  L  +  L++  N     P E+  L+ L 
Sbjct: 565 ETFPKELCALHNLQVLDISENQLQKLPSDITKLKGIQKLNLSSNRFSYFPVELCQLQTLE 624

Query: 522 TLYLN--DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            LYL+      L  +P EL   + L+ + + N  + +IP  I
Sbjct: 625 ALYLSRTHGRMLTRLPEELTSMTQLKTLDISNNAIKEIPRNI 666



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 226/448 (50%), Gaps = 9/448 (2%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           I KE L+   EN+  L L+ + I +LP  +E L +LE L L  N L ++P  +  + NL 
Sbjct: 222 IPKELLQL--ENMRQLFLNSNCIENLPSDLESLINLETLSLGKNMLTNVPESLSSLKNLQ 279

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L  N LT    SL  L +L  L+L  N +  LP  + +L +L+ L +  N++  +  
Sbjct: 280 VLNLEYNQLTIFSKSLCFLPKLISLNLTGNMIGSLPKEIRELKNLENLLMDHNKLTFLSV 339

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           +I  L  +  L + DNK+  + P++   + L  L+L  N L+++PK++  C  L  L L 
Sbjct: 340 EIFQLPKIKELQLADNKLEAISPKIENFRELRILNLDKNLLKKIPKKLSRCVKLECLSLS 399

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
            N +  +P  +  L NL +L +S N++  + E +S   ++      G  ++ +P   + +
Sbjct: 400 DNSIEELPRKIHRLKNLKQLHVSRNKMIKMAEEISHLSNIISLEFSGNQITHIPIE-IKN 458

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
              I  + L+ N    +P G      S+  ++F  N I +IP  + S +K L  + +  N
Sbjct: 459 CRKITRVELNYNNIMYFPVGL-CALPSLDYLSFNGNYISEIPMDV-SFSKQLLHLELNTN 516

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L  L   L +   L  L++G NQI  +   I  +V+L VL++S N  +  P  +  L  
Sbjct: 517 KLPVLSEHLCSLTNLEYLDVGQNQIKTIPSCISTMVSLRVLIVSGNKFETFPKELCALHN 576

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN---L 507
           L+ LD+ EN+L+ LP++I  LK +Q+L L SN+    P  +  L  L  L +   +   L
Sbjct: 577 LQVLDISENQLQKLPSDITKLKGIQKLNLSSNRFSYFPVELCQLQTLEALYLSRTHGRML 636

Query: 508 QSIPEEIGTLENLHTLYLNDNTCLNNIP 535
             +PEE+ ++  L TL +++N  +  IP
Sbjct: 637 TRLPEELTSMTQLKTLDISNN-AIKEIP 663



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 229/452 (50%), Gaps = 29/452 (6%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C    +++L+L+ + I  LP  + +L +LE L +  NKL  L  +I  +  +  L LA+N
Sbjct: 296 CFLPKLISLNLTGNMIGSLPKEIRELKNLENLLMDHNKLTFLSVEIFQLPKIKELQLADN 355

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L ++   + N ++LR+L+L  N L ++P  + +   L+ L L  N I+ +   I  L N
Sbjct: 356 KLEAISPKIENFRELRILNLDKNLLKKIPKKLSRCVKLECLSLSDNSIEELPRKIHRLKN 415

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  NK+ ++  E+  L N+++L+ + N +  +P EI NC  +  ++L +N ++  
Sbjct: 416 LKQLHVSRNKMIKMAEEISHLSNIISLEFSGNQITHIPIEIKNCRKITRVELNYNNIMYF 475

Query: 278 P---------DML---GNLIN-----------LTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P         D L   GN I+           L  L L+ N+L  + E L    +L   +
Sbjct: 476 PVGLCALPSLDYLSFNGNYISEIPMDVSFSKQLLHLELNTNKLPVLSEHLCSLTNLEYLD 535

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           V    + ++P   +S++ S+  + +S NKF  +P        ++  ++   NQ+ K+P  
Sbjct: 536 VGQNQIKTIP-SCISTMVSLRVLIVSGNKFETFPKEL-CALHNLQVLDISENQLQKLPSD 593

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ---ISKLSEDIQNLVNLEVL 431
           I ++ K + K+N+  N  +  P++L     L  L L       +++L E++ ++  L+ L
Sbjct: 594 I-TKLKGIQKLNLSSNRFSYFPVELCQLQTLEALYLSRTHGRMLTRLPEELTSMTQLKTL 652

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            +SNN +K++P +IG LR L  L    N++ SLP     LK LQ L L+ N L +LP AI
Sbjct: 653 DISNNAIKEIPRNIGELRYLVSLHAYNNQISSLPPSFLSLKVLQHLDLRGNNLTALPSAI 712

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
             L +L  ++  +N L   P E+   + LHT+
Sbjct: 713 YSLMSLKEINFDDNPLLRPPVEVCKGKQLHTI 744


>gi|114599989|ref|XP_001162676.1| PREDICTED: protein LAP2 isoform 2 [Pan troglodytes]
 gi|397514431|ref|XP_003827491.1| PREDICTED: protein LAP2 isoform 4 [Pan paniscus]
 gi|410217136|gb|JAA05787.1| erbb2 interacting protein [Pan troglodytes]
 gi|410260626|gb|JAA18279.1| erbb2 interacting protein [Pan troglodytes]
 gi|410300754|gb|JAA28977.1| erbb2 interacting protein [Pan troglodytes]
 gi|410354911|gb|JAA44059.1| erbb2 interacting protein [Pan troglodytes]
          Length = 1302

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|8923909|ref|NP_061165.1| protein LAP2 isoform 2 [Homo sapiens]
 gi|8572221|gb|AAF77048.1|AF263744_1 erbb2-interacting protein ERBIN [Homo sapiens]
 gi|20521800|dbj|BAA86539.2| KIAA1225 protein [Homo sapiens]
 gi|119571719|gb|EAW51334.1| erbb2 interacting protein, isoform CRA_c [Homo sapiens]
 gi|168269750|dbj|BAG10002.1| erbb2 interacting protein [synthetic construct]
          Length = 1371

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|441658612|ref|XP_004091272.1| PREDICTED: protein LAP2 [Nomascus leucogenys]
          Length = 1418

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|358679318|ref|NP_001240628.1| protein LAP2 isoform 8 [Homo sapiens]
          Length = 1419

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|332821306|ref|XP_003310748.1| PREDICTED: protein LAP2 [Pan troglodytes]
 gi|397514433|ref|XP_003827492.1| PREDICTED: protein LAP2 isoform 5 [Pan paniscus]
          Length = 1346

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|426384526|ref|XP_004058813.1| PREDICTED: protein LAP2 isoform 2 [Gorilla gorilla gorilla]
          Length = 1419

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|114599987|ref|XP_001162804.1| PREDICTED: protein LAP2 isoform 4 [Pan troglodytes]
 gi|397514425|ref|XP_003827488.1| PREDICTED: protein LAP2 isoform 1 [Pan paniscus]
 gi|410217134|gb|JAA05786.1| erbb2 interacting protein [Pan troglodytes]
 gi|410217138|gb|JAA05788.1| erbb2 interacting protein [Pan troglodytes]
 gi|410260628|gb|JAA18280.1| erbb2 interacting protein [Pan troglodytes]
 gi|410300756|gb|JAA28978.1| erbb2 interacting protein [Pan troglodytes]
 gi|410354909|gb|JAA44058.1| erbb2 interacting protein [Pan troglodytes]
          Length = 1371

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|426384524|ref|XP_004058812.1| PREDICTED: protein LAP2 isoform 1 [Gorilla gorilla gorilla]
          Length = 1371

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|397514429|ref|XP_003827490.1| PREDICTED: protein LAP2 isoform 3 [Pan paniscus]
 gi|410039319|ref|XP_003950596.1| PREDICTED: protein LAP2 [Pan troglodytes]
          Length = 1419

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|358679316|ref|NP_001240627.1| protein LAP2 isoform 4 [Homo sapiens]
          Length = 1346

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|410354913|gb|JAA44060.1| erbb2 interacting protein [Pan troglodytes]
          Length = 1367

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|92098125|gb|AAI15013.1| Erbb2 interacting protein [Homo sapiens]
          Length = 1371

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPEPIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPEPIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPEPIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|358679311|ref|NP_001240626.1| protein LAP2 isoform 1 [Homo sapiens]
 gi|116242614|sp|Q96RT1.2|LAP2_HUMAN RecName: Full=Protein LAP2; AltName: Full=Densin-180-like protein;
           AltName: Full=Erbb2-interacting protein; Short=Erbin
 gi|119571720|gb|EAW51335.1| erbb2 interacting protein, isoform CRA_d [Homo sapiens]
          Length = 1412

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|14582259|gb|AAK69431.1| densin-180-like protein [Homo sapiens]
          Length = 1412

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|194388158|dbj|BAG65463.1| unnamed protein product [Homo sapiens]
          Length = 1346

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|358679323|ref|NP_001240630.1| protein LAP2 isoform 9 [Homo sapiens]
          Length = 1367

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|119571718|gb|EAW51333.1| erbb2 interacting protein, isoform CRA_b [Homo sapiens]
          Length = 1460

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|302835578|ref|XP_002949350.1| hypothetical protein VOLCADRAFT_89724 [Volvox carteri f.
           nagariensis]
 gi|300265177|gb|EFJ49369.1| hypothetical protein VOLCADRAFT_89724 [Volvox carteri f.
           nagariensis]
          Length = 383

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 129/388 (33%), Positives = 192/388 (49%), Gaps = 48/388 (12%)

Query: 112 SITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQ 171
            I+ LPP+   L  L++L+L  N L  LP +IG +  L  L L  N L SLP  +  + Q
Sbjct: 23  GISELPPAFFNLPDLQKLWLSNNGLRKLPEEIGNLPQLDSLWLGSNLLRSLPGGVTQMTQ 82

Query: 172 LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
           L+ L L  N L  LP  V  +TSL+ L +  N+++ V  +I  L++L+ L +  N ++ L
Sbjct: 83  LKKLWLPANMLVRLPAEVCAITSLEWLDVSENKLEEVCAEIGQLTSLTRLDLHTNVLKGL 142

Query: 232 PPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLR 291
           PP +G L  +  L L  N LE LP +IG CT LV L L  N+L  +P  +G L  L RL 
Sbjct: 143 PPTIGRLTRVKHLSLHFNQLESLPPDIGQCTSLVWLSLNANQLKQLPTEMGELTGLVRLS 202

Query: 292 LSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGG 351
           L  N LESVP  L +                        LT +  ++L +N+ T  P   
Sbjct: 203 LHINELESVPPELGR------------------------LTGLEALSLHKNRLTRLPP-- 236

Query: 352 PTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLG 411
                             ++P G+   A +  ++++ +N L  +P +LG    L EL L 
Sbjct: 237 ------------------ELPLGL---AGSCCRLSLYENQLGEVPPELGNMGLLQELWLY 275

Query: 412 TNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
           +NQ++ +  ++  L  L  L L  N L  LP  I  L +L+ L L+ N+L  LP+E+G L
Sbjct: 276 SNQLTSVPSELGRLGELRRLWLDRNQLTSLPREISGLTRLQELYLDHNRLVELPSELGAL 335

Query: 472 KELQRLILQSN-QLVSLPRAIGHLTNLS 498
            +L+RL L+ N +L SLP  +  L  L 
Sbjct: 336 TQLRRLYLEGNPELQSLPPPVEALPCLG 363



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 175/364 (48%), Gaps = 48/364 (13%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + +  LP  +  L  L+ L+L  N L SLP  +  +T L  L L  N L  LP  
Sbjct: 40  LWLSNNGLRKLPEEIGNLPQLDSLWLGSNLLRSLPGGVTQMTQLKKLWLPANMLVRLPAE 99

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  +  L  LD+  NKL E+   + +LTSL  L L  N +K + P I  L+ +  LS+  
Sbjct: 100 VCAITSLEWLDVSENKLEEVCAEIGQLTSLTRLDLHTNVLKGLPPTIGRLTRVKHLSLHF 159

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LPP++G+  +LV L L  N L++LP E+G  T LV L L  NEL ++P  LG L 
Sbjct: 160 NQLESLPPDIGQCTSLVWLSLNANQLKQLPTEMGELTGLVRLSLHINELESVPPELGRLT 219

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L  NRL  +P                     LP GL  S   +           
Sbjct: 220 GLEALSLHKNRLTRLP-------------------PELPLGLAGSCCRL----------- 249

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                      S+Y      NQ+ ++P  + +    L ++ +  N LTS+P +LG    L
Sbjct: 250 -----------SLY-----ENQLGEVPPELGNMGL-LQELWLYSNQLTSVPSELGRLGEL 292

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN-KLESL 464
             L L  NQ++ L  +I  L  L+ L L +N L +LPS +G L +L+ L LE N +L+SL
Sbjct: 293 RRLWLDRNQLTSLPREISGLTRLQELYLDHNRLVELPSELGALTQLRRLYLEGNPELQSL 352

Query: 465 PNEI 468
           P  +
Sbjct: 353 PPPV 356



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 178/356 (50%), Gaps = 28/356 (7%)

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           ++ELP   + L  L+ L+L  N ++ +  +I  L  L  L +  N +R LP  + ++  L
Sbjct: 24  ISELPPAFFNLPDLQKLWLSNNGLRKLPEEIGNLPQLDSLWLGSNLLRSLPGGVTQMTQL 83

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
             L L  N L  LP E+   T L  LD+  N+L  +   +G L +LTRL L  N L+ +P
Sbjct: 84  KKLWLPANMLVRLPAEVCAITSLEWLDVSENKLEEVCAEIGQLTSLTRLDLHTNVLKGLP 143

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
            T+ +                        LT + +++L  N+  + P     Q TS+  +
Sbjct: 144 PTIGR------------------------LTRVKHLSLHFNQLESLPPD-IGQCTSLVWL 178

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
           +   NQ+ ++P  +      L ++++  N L S+P +LG   GL  L+L  N++++L  +
Sbjct: 179 SLNANQLKQLPTEM-GELTGLVRLSLHINELESVPPELGRLTGLEALSLHKNRLTRLPPE 237

Query: 422 IQNLVNLEVLVLS--NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLIL 479
           +   +      LS   N L ++P  +GN+  L+ L L  N+L S+P+E+G L EL+RL L
Sbjct: 238 LPLGLAGSCCRLSLYENQLGEVPPELGNMGLLQELWLYSNQLTSVPSELGRLGELRRLWL 297

Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
             NQL SLPR I  LT L  L +  N L  +P E+G L  L  LYL  N  L ++P
Sbjct: 298 DRNQLTSLPREISGLTRLQELYLDHNRLVELPSELGALTQLRRLYLEGNPELQSLP 353



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 173/354 (48%), Gaps = 36/354 (10%)

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           I ELPP    L +L  L L++N L +LP+EIGN   L +L L  N L ++P  +  +  L
Sbjct: 24  ISELPPAFFNLPDLQKLWLSNNGLRKLPEEIGNLPQLDSLWLGSNLLRSLPGGVTQMTQL 83

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            +L L  N L  +P              E CA+           TS+  + +S NK    
Sbjct: 84  KKLWLPANMLVRLP-------------AEVCAI-----------TSLEWLDVSENKLEEV 119

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIP--YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                 Q TS+  ++   N +  +P   G  +R K+LS   +  N L SLP D+G    L
Sbjct: 120 -CAEIGQLTSLTRLDLHTNVLKGLPPTIGRLTRVKHLS---LHFNQLESLPPDIGQCTSL 175

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L+L  NQ+ +L  ++  L  L  L L  N L+ +P  +G L  L+ L L +N+L  LP
Sbjct: 176 VWLSLNANQLKQLPTEMGELTGLVRLSLHINELESVPPELGRLTGLEALSLHKNRLTRLP 235

Query: 466 NEI--GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
            E+  G      RL L  NQL  +P  +G++  L  L +  N L S+P E+G L  L  L
Sbjct: 236 PELPLGLAGSCCRLSLYENQLGEVPPELGNMGLLQELWLYSNQLTSVPSELGRLGELRRL 295

Query: 524 YLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQG 577
           +L+ N  L ++P E++  + LQ + LD+  L ++PSE+   G    +R L ++G
Sbjct: 296 WLDRNQ-LTSLPREISGLTRLQELYLDHNRLVELPSEL---GALTQLRRLYLEG 345



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 135/267 (50%), Gaps = 3/267 (1%)

Query: 78  TTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLA 137
           T  KK  + A++ +      C   ++  LD+S++ +  +   + +LT L  L L+ N L 
Sbjct: 81  TQLKKLWLPANMLVRLPAEVCAITSLEWLDVSENKLEEVCAEIGQLTSLTRLDLHTNVLK 140

Query: 138 SLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
            LP  IG +T +  L L  N L SLP  +     L  L L  N+L +LP  + +LT L  
Sbjct: 141 GLPPTIGRLTRVKHLSLHFNQLESLPPDIGQCTSLVWLSLNANQLKQLPTEMGELTGLVR 200

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE--LGELKNLVTLDLAHNHLEELP 255
           L L  N +++V P++  L+ L  LS+  N++  LPPE  LG   +   L L  N L E+P
Sbjct: 201 LSLHINELESVPPELGRLTGLEALSLHKNRLTRLPPELPLGLAGSCCRLSLYENQLGEVP 260

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
            E+GN  +L  L L  N+L ++P  LG L  L RL L  N+L S+P  +S    L E  +
Sbjct: 261 PELGNMGLLQELWLYSNQLTSVPSELGRLGELRRLWLDRNQLTSLPREISGLTRLQELYL 320

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRN 342
           +   L  LP   L +LT +  + L  N
Sbjct: 321 DHNRLVELPSE-LGALTQLRRLYLEGN 346



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 128/251 (50%), Gaps = 10/251 (3%)

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIP 372
           V+ C +S LP    + L  +  + LS N     P   G   Q  S++      N +  +P
Sbjct: 19  VDACGISELPPAFFN-LPDLQKLWLSNNGLRKLPEEIGNLPQLDSLW---LGSNLLRSLP 74

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
            G+ ++   L K+ +  N+L  LP ++     L  L++  N++ ++  +I  L +L  L 
Sbjct: 75  GGV-TQMTQLKKLWLPANMLVRLPAEVCAITSLEWLDVSENKLEEVCAEIGQLTSLTRLD 133

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L  N+LK LP +IG L ++K L L  N+LESLP +IG    L  L L +NQL  LP  +G
Sbjct: 134 LHTNVLKGLPPTIGRLTRVKHLSLHFNQLESLPPDIGQCTSLVWLSLNANQLKQLPTEMG 193

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE--LALCSNLQIMSLD 550
            LT L  LS+  N L+S+P E+G L  L  L L+ N  L  +P E  L L  +   +SL 
Sbjct: 194 ELTGLVRLSLHINELESVPPELGRLTGLEALSLHKNR-LTRLPPELPLGLAGSCCRLSLY 252

Query: 551 NCPLSQIPSEI 561
              L ++P E+
Sbjct: 253 ENQLGEVPPEL 263


>gi|260788644|ref|XP_002589359.1| hypothetical protein BRAFLDRAFT_77808 [Branchiostoma floridae]
 gi|229274536|gb|EEN45370.1| hypothetical protein BRAFLDRAFT_77808 [Branchiostoma floridae]
          Length = 862

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 215/413 (52%), Gaps = 3/413 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
            +L LDLS   +T +P  V  +T LE+L +  N L S+P  IG +  L  L    N LT 
Sbjct: 14  GLLTLDLSNQGLTSIPEEVFDITDLEDLDVSDNNLTSIPEAIGRLQKLYRLDAYSNMLTR 73

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP ++ +LQ+L  L +  N+L E+P  V  L +L++L +  N++ T  P ++ L  L  L
Sbjct: 74  LPQAIGSLQKLTHLYIYDNQLTEMPSGVCSLPNLEVLSVGNNKLSTFPPGVEKLQKLREL 133

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++ E+P  +  L NL  L +++N+L   P  +     L  L +  N+L  +P  +
Sbjct: 134 YINGNQLTEVPSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGV 193

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
            +L NL  L +S N L + P  + K   L E  + G  L+ +P G + SL ++  +++S 
Sbjct: 194 CSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSG-VCSLPNLEVLSVSN 252

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           NK + +P  G  +   +  +    NQ+ ++P G+ S   +L  +++ +N +  LP  +  
Sbjct: 253 NKLSTFPP-GVEKLQKLRELYIYDNQLTEVPTGVCS-LPDLEWLSVGNNPIRRLPRQVLQ 310

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L +L  G  +   + +++ NL +L  L L  NLLK LPS++ +L  L+ + L  NK 
Sbjct: 311 LKTLEKLYAGDCKFDMVPDEVGNLQHLWFLALEYNLLKTLPSTMRHLHNLREVRLWSNKF 370

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           ++ P  +  L  +++L++++N +  LP A+     L  L V  N L   P+++
Sbjct: 371 DTFPEVLCELPAMEKLVIRNNNITRLPTALHRADKLKDLDVSGNPLTYPPQDV 423



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 212/432 (49%), Gaps = 4/432 (0%)

Query: 146 VTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRI 205
           V  L  L L+   LTS+P+ + ++  L  LD+  N L  +P  + +L  L  L    N +
Sbjct: 12  VNGLLTLDLSNQGLTSIPEEVFDITDLEDLDVSDNNLTSIPEAIGRLQKLYRLDAYSNML 71

Query: 206 KTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
             +   I  L  L+ L + DN++ E+P  +  L NL  L + +N L   P  +     L 
Sbjct: 72  TRLPQAIGSLQKLTHLYIYDNQLTEMPSGVCSLPNLEVLSVGNNKLSTFPPGVEKLQKLR 131

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
            L +  N+L  +P  + +L NL  L +S N L + P  + K   L E  + G  L+ +P 
Sbjct: 132 ELYINGNQLTEVPSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPS 191

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
           G + SL ++  + +S N  + +P  G  +   +  +    NQ+ ++P G+ S   NL  +
Sbjct: 192 G-VCSLPNLEVLGVSNNNLSTFPP-GVEKLQKLRELYIYGNQLTEVPSGVCS-LPNLEVL 248

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           ++ +N L++ P  +     L EL +  NQ++++   + +L +LE L + NN +++LP  +
Sbjct: 249 SVSNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPTGVCSLPDLEWLSVGNNPIRRLPRQV 308

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
             L+ L+ L   + K + +P+E+G L+ L  L L+ N L +LP  + HL NL  + +  N
Sbjct: 309 LQLKTLEKLYAGDCKFDMVPDEVGNLQHLWFLALEYNLLKTLPSTMRHLHNLREVRLWSN 368

Query: 506 NLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGG 565
              + PE +  L  +  L + +N  +  +P  L     L+ + +   PL+  P ++   G
Sbjct: 369 KFDTFPEVLCELPAMEKLVIRNNN-ITRLPTALHRADKLKDLDVSGNPLTYPPQDVCEQG 427

Query: 566 PSLIIRYLKMQG 577
              I+ +LK + 
Sbjct: 428 TGAIMAFLKQEA 439



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 197/393 (50%), Gaps = 11/393 (2%)

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           LN LP  V  L +L    L    + ++  ++  +++L  L + DN +  +P  +G L+ L
Sbjct: 5   LNLLPQTVNGLLTLD---LSNQGLTSIPEEVFDITDLEDLDVSDNNLTSIPEAIGRLQKL 61

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
             LD   N L  LP+ IG+   L  L +  N+L  +P  + +L NL  L +  N+L + P
Sbjct: 62  YRLDAYSNMLTRLPQAIGSLQKLTHLYIYDNQLTEMPSGVCSLPNLEVLSVGNNKLSTFP 121

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
             + K   L E  + G  L+ +P G + SL ++  + +S N  + +P  G  +   +  +
Sbjct: 122 PGVEKLQKLRELYINGNQLTEVPSG-VCSLPNLEVLGVSNNNLSTFPP-GVEKLQKLREL 179

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
               NQ+ ++P G+ S   NL  + + +N L++ P  +     L EL +  NQ++++   
Sbjct: 180 YIYGNQLTEVPSGVCS-LPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSG 238

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           + +L NLEVL +SNN L   P  +  L+KL+ L + +N+L  +P  +  L +L+ L + +
Sbjct: 239 VCSLPNLEVLSVSNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPTGVCSLPDLEWLSVGN 298

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           N +  LPR +  L  L  L  G+     +P+E+G L++L  L L  N  L  +P  +   
Sbjct: 299 NPIRRLPRQVLQLKTLEKLYAGDCKFDMVPDEVGNLQHLWFLALEYN-LLKTLPSTMRHL 357

Query: 542 SNLQIMSLDNCPLSQIPSEIVVGGPS---LIIR 571
            NL+ + L +      P E++   P+   L+IR
Sbjct: 358 HNLREVRLWSNKFDTFP-EVLCELPAMEKLVIR 389



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 165/371 (44%), Gaps = 49/371 (13%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+  L +  + ++  PP VEKL  L ELY+ GN+L  +PS +  + NL  LG++ N
Sbjct: 102 CSLPNLEVLSVGNNKLSTFPPGVEKLQKLRELYINGNQLTEVPSGVCSLPNLEVLGVSNN 161

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           +L++ P  +  LQ+LR L +  N+L E+P  V  L +L++L +  N + T  P ++ L  
Sbjct: 162 NLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQK 221

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N++ E+P  +  L NL  L +++N L   P  +     L  L +  N+L  +
Sbjct: 222 LRELYIYGNQLTEVPSGVCSLPNLEVLSVSNNKLSTFPPGVEKLQKLRELYIYDNQLTEV 281

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  + +L +L  L +  N +  +P  + +   L +     C    +PD        + N+
Sbjct: 282 PTGVCSLPDLEWLSVGNNPIRRLPRQVLQLKTLEKLYAGDCKFDMVPD-------EVGNL 334

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
                               ++ +  E+N +  +P        NL +V +  N   + P 
Sbjct: 335 ------------------QHLWFLALEYNLLKTLP-STMRHLHNLREVRLWSNKFDTFP- 374

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
                                 E +  L  +E LV+ NN + +LP+++    KLK LD+ 
Sbjct: 375 ----------------------EVLCELPAMEKLVIRNNNITRLPTALHRADKLKDLDVS 412

Query: 458 ENKLESLPNEI 468
            N L   P ++
Sbjct: 413 GNPLTYPPQDV 423



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 68/140 (48%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   ++  L +  + I  LP  V +L  LE+LY    K   +P ++G + +L  L L  N
Sbjct: 286 CSLPDLEWLSVGNNPIRRLPRQVLQLKTLEKLYAGDCKFDMVPDEVGNLQHLWFLALEYN 345

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L +LP ++ +L  LR + L  NK +  P V+ +L +++ L +R N I  +   +     
Sbjct: 346 LLKTLPSTMRHLHNLREVRLWSNKFDTFPEVLCELPAMEKLVIRNNNITRLPTALHRADK 405

Query: 218 LSMLSMRDNKIRELPPELGE 237
           L  L +  N +   P ++ E
Sbjct: 406 LKDLDVSGNPLTYPPQDVCE 425


>gi|379730485|ref|YP_005322681.1| hypothetical protein SGRA_2368 [Saprospira grandis str. Lewin]
 gi|378576096|gb|AFC25097.1| leucine-rich repeat-containing protein [Saprospira grandis str.
           Lewin]
          Length = 509

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 222/450 (49%), Gaps = 28/450 (6%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L  LP +IG    +  L + +N L  LPDSLANL QL  LD+  N+L+ LP V+++L  L
Sbjct: 28  LQELPQEIGRSKGMKQLNIEDNRLKDLPDSLANLGQLEWLDISDNRLSPLPKVLFQLRKL 87

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           + L L  N +  +  ++     L  L +++N+++ LP   G+LK L  L L  N L  LP
Sbjct: 88  RWLDLSNNGLSELGEELAAWEELMRLDLKNNQLQALPNNFGQLKALRKLLLERNQLSALP 147

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
              G    L  LDL  N    +P+ +G L +L +L LS N +  + + L +  +L E   
Sbjct: 148 ASFGQLQQLQQLDLSENAFTQLPEEIGQLKSLKQLSLSANPMPQLTKVLGQLSNLEELQA 207

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
           EG  L  +P   +  L ++ ++ L  N+  +  +      +++  ++  +N+++++P  +
Sbjct: 208 EGLGLEEVPKE-IGQLNNLQSLFLGYNRLKSL-AAELGNCSALEQLDLGNNRLERLPLNL 265

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
            +R + L  +N++DN L  LPL L     L EL++    +  L   + +L  L  L LS 
Sbjct: 266 -ARCQQLKVLNLEDNPLGELPLLLQEIQALEELDMSNCNLVDLGAGL-SLPALHWLDLSA 323

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI-------------GFLK---------- 472
           N L+ LPS+ G L  L  LDL +N+L+  P  +              FL+          
Sbjct: 324 NQLRDLPSNFGQLTALNWLDLRDNQLQKWPKALEGLSQIRQLLLAGNFLRQINLSDLDWP 383

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
           EL+ L L  N+L  L      L  L  L++ +N L  +PE+   L NL  L L+DN  L+
Sbjct: 384 ELEELDLSKNELTELSGQWDKLPQLRQLNLEKNQLAQLPEDWRPLSNLEELDLSDNQ-LD 442

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           ++P  LA    +Q + L N   ++ P  ++
Sbjct: 443 SLPQSLAELDQIQWLDLRNNQFTEFPQALL 472



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 138/402 (34%), Positives = 206/402 (51%), Gaps = 5/402 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS + ++ L   +     L  L L  N+L +LP+  G +  L  L L  N L++LP S
Sbjct: 90  LDLSNNGLSELGEELAAWEELMRLDLKNNQLQALPNNFGQLKALRKLLLERNQLSALPAS 149

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
              LQQL+ LDL  N   +LP  + +L SLK L L  N +  +   +  LSNL  L    
Sbjct: 150 FGQLQQLQQLDLSENAFTQLPEEIGQLKSLKQLSLSANPMPQLTKVLGQLSNLEELQAEG 209

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
             + E+P E+G+L NL +L L +N L+ L  E+GNC+ L  LDL +N L  +P  L    
Sbjct: 210 LGLEEVPKEIGQLNNLQSLFLGYNRLKSLAAELGNCSALEQLDLGNNRLERLPLNLARCQ 269

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L  N L  +P  L +   L E ++  C L  L  GL  SL +++ + LS N+  
Sbjct: 270 QLKVLNLEDNPLGELPLLLQEIQALEELDMSNCNLVDLGAGL--SLPALHWLDLSANQLR 327

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             PS    Q T++  ++   NQ+ K P  +   ++ + ++ +  N L  + L    W  L
Sbjct: 328 DLPSNF-GQLTALNWLDLRDNQLQKWPKALEGLSQ-IRQLLLAGNFLRQINLSDLDWPEL 385

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            EL+L  N++++LS     L  L  L L  N L +LP     L  L+ LDL +N+L+SLP
Sbjct: 386 EELDLSKNELTELSGQWDKLPQLRQLNLEKNQLAQLPEDWRPLSNLEELDLSDNQLDSLP 445

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLT-NLSYLSVGENN 506
             +  L ++Q L L++NQ    P+A+  L   L  L +GENN
Sbjct: 446 QSLAELDQIQWLDLRNNQFTEFPQALLPLVGQLQALYLGENN 487



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 154/316 (48%), Gaps = 27/316 (8%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           K+L  LD +   L+ELP+EIG    +  L+++ N L ++PD L NL  L  L +S NRL 
Sbjct: 16  KSLKKLDASRKGLQELPQEIGRSKGMKQLNIEDNRLKDLPDSLANLGQLEWLDISDNRLS 75

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
            +P+ L +   L   ++    LS L + L +                         +  +
Sbjct: 76  PLPKVLFQLRKLRWLDLSNNGLSELGEELAA-------------------------WEEL 110

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
             ++ ++NQ+  +P   F + K L K+ ++ N L++LP   G    L +L+L  N  ++L
Sbjct: 111 MRLDLKNNQLQALPNN-FGQLKALRKLLLERNQLSALPASFGQLQQLQQLDLSENAFTQL 169

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
            E+I  L +L+ L LS N + +L   +G L  L+ L  E   LE +P EIG L  LQ L 
Sbjct: 170 PEEIGQLKSLKQLSLSANPMPQLTKVLGQLSNLEELQAEGLGLEEVPKEIGQLNNLQSLF 229

Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFEL 538
           L  N+L SL   +G+ + L  L +G N L+ +P  +   + L  L L DN  L  +P  L
Sbjct: 230 LGYNRLKSLAAELGNCSALEQLDLGNNRLERLPLNLARCQQLKVLNLEDNP-LGELPLLL 288

Query: 539 ALCSNLQIMSLDNCPL 554
                L+ + + NC L
Sbjct: 289 QEIQALEELDMSNCNL 304



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 138/303 (45%), Gaps = 52/303 (17%)

Query: 112 SITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQ 171
            +  +P  + +L +L+ L+L  N+L SL +++G  + L  L L  N L  LP +LA  QQ
Sbjct: 211 GLEEVPKEIGQLNNLQSLFLGYNRLKSLAAELGNCSALEQLDLGNNRLERLPLNLARCQQ 270

Query: 172 LRVLDLRHNKLNELPMVVYKLTSLK----------------------ILYLRFNRIKTVH 209
           L+VL+L  N L ELP+++ ++ +L+                       L L  N+++ + 
Sbjct: 271 LKVLNLEDNPLGELPLLLQEIQALEELDMSNCNLVDLGAGLSLPALHWLDLSANQLRDLP 330

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKN-----------------------LVTLDL 246
            +   L+ L+ L +RDN++++ P  L  L                         L  LDL
Sbjct: 331 SNFGQLTALNWLDLRDNQLQKWPKALEGLSQIRQLLLAGNFLRQINLSDLDWPELEELDL 390

Query: 247 AHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK 306
           + N L EL  +      L  L+L+ N+L  +P+    L NL  L LS N+L+S+P++L++
Sbjct: 391 SKNELTELSGQWDKLPQLRQLNLEKNQLAQLPEDWRPLSNLEELDLSDNQLDSLPQSLAE 450

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
              +   ++     +  P  LL  +  +  + L  N ++           +++  +FE  
Sbjct: 451 LDQIQWLDLRNNQFTEFPQALLPLVGQLQALYLGENNWSESA-------LALWKTHFEEV 503

Query: 367 QID 369
            +D
Sbjct: 504 IVD 506


>gi|114599985|ref|XP_001162761.1| PREDICTED: protein LAP2 isoform 3 [Pan troglodytes]
 gi|397514427|ref|XP_003827489.1| PREDICTED: protein LAP2 isoform 2 [Pan paniscus]
          Length = 1412

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|402591760|gb|EJW85689.1| leucine-rich repeat-containing protein 1, partial [Wuchereria
           bancrofti]
          Length = 581

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 216/435 (49%), Gaps = 44/435 (10%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F  C  + +  LD  + ++  +P  +++    LEE+YL  N +  L   +     L  L 
Sbjct: 8   FFACNRQ-VDMLDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILS 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L+EN +  LP  +A+L  L  L+L+ N +++LP  +     LKIL L  N I  +   I 
Sbjct: 67  LSENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPQTIT 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L++++ L + D  + ++P ++G L+NL +L++  N L  +P  I     L  LDL HNE
Sbjct: 127 QLTSMTSLGLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVPPSISELNQLRRLDLGHNE 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L ++P+ +G L NL  L +  N LE++PE++ +C  L + +V    L  LPD +   L  
Sbjct: 187 LDDLPNEIGMLENLEELYVDQNDLEALPESIIQCRSLEQLDVSENKLMVLPDEI-GDLEK 245

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           ++++T+++N     PS            +  +N I      +  R K LS +    N +T
Sbjct: 246 LDDLTVAQNCLQVLPS------------SIGNNDI------VTGRLKKLSILKADRNAIT 287

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            L   +G+   LTE+                        L+ NLL ++PSS+GNL+ L+ 
Sbjct: 288 QLTPAIGSCHALTEI-----------------------YLTENLLTEIPSSLGNLKSLRT 324

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+L++N+L+ LP  IG    L  L L+ N +  LP  IG L NL  L V  N L  +P  
Sbjct: 325 LNLDKNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEIGRLENLRVLDVCNNRLNYLPFT 384

Query: 514 IGTLENLHTLYLNDN 528
           +  L  L  L+L++N
Sbjct: 385 VNVLFKLRALWLSEN 399



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 197/382 (51%), Gaps = 35/382 (9%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           +++K   RC++  IL+L  S++ +  LP  +  LT+LEEL L GN ++ LP +I     L
Sbjct: 51  DLDKPLFRCRKLKILSL--SENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQL 108

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
             L L+ N +T LP ++  L  +  L L    L ++P  +  L +L+ L +R N ++TV 
Sbjct: 109 KILDLSSNPITRLPQTITQLTSMTSLGLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVP 168

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
           P I  L+ L  L +  N++ +LP E+G L+NL  L +  N LE LP+ I  C  L  LD+
Sbjct: 169 PSISELNQLRRLDLGHNELDDLPNEIGMLENLEELYVDQNDLEALPESIIQCRSLEQLDV 228

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETL-------SKCVHLNEFNVEGCALSS 322
             N+L+ +PD +G+L  L  L ++ N L+ +P ++        +   L+    +  A++ 
Sbjct: 229 SENKLMVLPDEIGDLEKLDDLTVAQNCLQVLPSSIGNNDIVTGRLKKLSILKADRNAITQ 288

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           L    + S  ++  I L+ N  T  PS       S+ ++N + NQ+ ++P  I     +L
Sbjct: 289 LTPA-IGSCHALTEIYLTENLLTEIPSSL-GNLKSLRTLNLDKNQLKELPPTI-GGCTSL 345

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
           S ++++DNL+  LPL++G                        L NL VL + NN L  LP
Sbjct: 346 SVLSLRDNLIEQLPLEIG-----------------------RLENLRVLDVCNNRLNYLP 382

Query: 443 SSIGNLRKLKCLDLEENKLESL 464
            ++  L KL+ L L EN+ +++
Sbjct: 383 FTVNVLFKLRALWLSENQSQAM 404



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 109/196 (55%), Gaps = 2/196 (1%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           N I  +   +F R + L  +++ +N +  LP D+     L ELNL  N +S L E+I+N 
Sbjct: 47  NHIKDLDKPLF-RCRKLKILSLSENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNC 105

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
           + L++L LS+N + +LP +I  L  +  L L +  L  +P++IG L+ L+ L ++ N L 
Sbjct: 106 IQLKILDLSSNPITRLPQTITQLTSMTSLGLNDISLTQMPHDIGHLRNLRSLEVRENLLR 165

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
           ++P +I  L  L  L +G N L  +P EIG LENL  LY++ N  L  +P  +  C +L+
Sbjct: 166 TVPPSISELNQLRRLDLGHNELDDLPNEIGMLENLEELYVDQND-LEALPESIIQCRSLE 224

Query: 546 IMSLDNCPLSQIPSEI 561
            + +    L  +P EI
Sbjct: 225 QLDVSENKLMVLPDEI 240



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 105/199 (52%), Gaps = 3/199 (1%)

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           ++LS N+    PS      T +  +N + N +  +P  I      L  +++  N +T LP
Sbjct: 65  LSLSENEVIRLPSDI-AHLTYLEELNLKGNDVSDLPEEI-KNCIQLKILDLSSNPITRLP 122

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +     +T L L    ++++  DI +L NL  L +  NLL+ +P SI  L +L+ LDL
Sbjct: 123 QTITQLTSMTSLGLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVPPSISELNQLRRLDL 182

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+L+ LPNEIG L+ L+ L +  N L +LP +I    +L  L V EN L  +P+EIG 
Sbjct: 183 GHNELDDLPNEIGMLENLEELYVDQNDLEALPESIIQCRSLEQLDVSENKLMVLPDEIGD 242

Query: 517 LENLHTLYLNDNTCLNNIP 535
           LE L  L +  N CL  +P
Sbjct: 243 LEKLDDLTVAQN-CLQVLP 260



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 101/219 (46%), Gaps = 56/219 (25%)

Query: 86  QADLN-IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIG 144
           Q DL  + +  ++C+  ++  LD+S++ +  LP  +  L  L++L +  N L  LPS IG
Sbjct: 207 QNDLEALPESIIQCR--SLEQLDVSENKLMVLPDEIGDLEKLDDLTVAQNCLQVLPSSIG 264

Query: 145 --------------------YVTNLT-----C-----LGLAENSLTSLPDSLANLQQLRV 174
                                +T LT     C     + L EN LT +P SL NL+ LR 
Sbjct: 265 NNDIVTGRLKKLSILKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRT 324

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           L+L  N+L ELP                       P I   ++LS+LS+RDN I +LP E
Sbjct: 325 LNLDKNQLKELP-----------------------PTIGGCTSLSVLSLRDNLIEQLPLE 361

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
           +G L+NL  LD+ +N L  LP  +     L  L L  N+
Sbjct: 362 IGRLENLRVLDVCNNRLNYLPFTVNVLFKLRALWLSENQ 400


>gi|428183868|gb|EKX52725.1| hypothetical protein GUITHDRAFT_65038, partial [Guillardia theta
           CCMP2712]
          Length = 518

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 146/470 (31%), Positives = 236/470 (50%), Gaps = 15/470 (3%)

Query: 101 ENILNLDLSKSSITH------LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           + I  LD  K+   H      LP SV  L +L +L ++GN+L  LP ++G   +L  L +
Sbjct: 4   DKIFELDYLKTLFAHNNKIEVLPTSVGDLKNLAQLRIFGNRLTWLPEELGLCESLQTLWV 63

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLK-ILYLRFNRIKTVHP-DI 212
            +N L +LP S+  L QL++L +  N L   P  + +  +LK I         +V P +I
Sbjct: 64  QDNQLIALPKSMGKLTQLKILVVARNPLRSFPAELQECENLKDIDADGLQDTLSVPPMEI 123

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L +L  L +  N +  L   +  L  L  L L +  ++E+P  IG  + L T+    N
Sbjct: 124 TVLRDLHELHLSHNPLMALSDIIQTLNQLRVLRLDNTLIDEIPTFIGKLSKLRTISAVQN 183

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
            L ++PD L  L +LT++    N L  +PE + K  +L E +V    +  +P   + +L 
Sbjct: 184 RLTSLPDQLCTLTSLTKVNFDSNSLHVLPEAIGKLKNLKELSVTKNKIGWIPSS-IGNLH 242

Query: 333 SINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
           SI  + LS N+    P   G  Q  ++  +   HN I ++         NL  ++   N 
Sbjct: 243 SIEEMRLSFNRLQKIPQEIGRCQ--TLVRLRCSHNLISQL-PLELELLTNLEDLSFNSNQ 299

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           L +LP  +G    +T+L+L  N++S++S  +     LE L LS N++ +LPS+IGN+R++
Sbjct: 300 LETLPSSMGALTAMTKLDLSKNKLSRMSAVMGAWQRLEFLDLSGNMIAELPSTIGNMRQM 359

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           K LDL   +L + P EI  ++ L  L L  N L SLP  I  L  +  L++  NNL  +P
Sbjct: 360 K-LDLSNMELNNFPLEIVNMESLTVLDLSDNHLESLPPEIEQLVGVEILNLERNNLLFLP 418

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            E+G+L  +  L    N  L + P E    + ++ ++LDN  L Q+P E+
Sbjct: 419 LELGSLYTIRELLFAGNE-LRSPPVEHCQLTMIKSLNLDNNSLEQLPDEL 467



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 190/400 (47%), Gaps = 52/400 (13%)

Query: 210 PD-IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
           PD I  L  L  L   +NKI  LP  +G+LKNL  L +  N L  LP+E+G C  L TL 
Sbjct: 3   PDKIFELDYLKTLFAHNNKIEVLPTSVGDLKNLAQLRIFGNRLTWLPEELGLCESLQTLW 62

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS-SLPDGL 327
           +Q N+L+ +P  +G L  L  L ++ N L S P  L +C +L + + +G   + S+P   
Sbjct: 63  VQDNQLIALPKSMGKLTQLKILVVARNPLRSFPAELQECENLKDIDADGLQDTLSVPPME 122

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP--YGIFSRAKNLSKV 385
           ++ L  ++ + LS N   A  S        +  +  ++  ID+IP   G  S+ + +S V
Sbjct: 123 ITVLRDLHELHLSHNPLMAL-SDIIQTLNQLRVLRLDNTLIDEIPTFIGKLSKLRTISAV 181

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
               N LTSLP  L T   LT++N  +N +  L E I  L NL+ L ++ N +  +PSSI
Sbjct: 182 ---QNRLTSLPDQLCTLTSLTKVNFDSNSLHVLPEAIGKLKNLKELSVTKNKIGWIPSSI 238

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRL-----------------------ILQSN 482
           GNL  ++ + L  N+L+ +P EIG  + L RL                          SN
Sbjct: 239 GNLHSIEEMRLSFNRLQKIPQEIGRCQTLVRLRCSHNLISQLPLELELLTNLEDLSFNSN 298

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC------------ 530
           QL +LP ++G LT ++ L + +N L  +   +G  + L  L L+ N              
Sbjct: 299 QLETLPSSMGALTAMTKLDLSKNKLSRMSAVMGAWQRLEFLDLSGNMIAELPSTIGNMRQ 358

Query: 531 ---------LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                    LNN P E+    +L ++ L +  L  +P EI
Sbjct: 359 MKLDLSNMELNNFPLEIVNMESLTVLDLSDNHLESLPPEI 398



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 79/136 (58%), Gaps = 2/136 (1%)

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           L+ L   NN ++ LP+S+G+L+ L  L +  N+L  LP E+G  + LQ L +Q NQL++L
Sbjct: 12  LKTLFAHNNKIEVLPTSVGDLKNLAQLRIFGNRLTWLPEELGLCESLQTLWVQDNQLIAL 71

Query: 488 PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND-NTCLNNIPFELALCSNLQI 546
           P+++G LT L  L V  N L+S P E+   ENL  +  +     L+  P E+ +  +L  
Sbjct: 72  PKSMGKLTQLKILVVARNPLRSFPAELQECENLKDIDADGLQDTLSVPPMEITVLRDLHE 131

Query: 547 MSLDNCPLSQIPSEIV 562
           + L + PL  + S+I+
Sbjct: 132 LHLSHNPLMAL-SDII 146


>gi|323453411|gb|EGB09283.1| hypothetical protein AURANDRAFT_24947, partial [Aureococcus
           anophagefferens]
          Length = 318

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/315 (37%), Positives = 167/315 (53%), Gaps = 5/315 (1%)

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L  L+ L++ ++ +  LP   G L +LV L+L +N L  LP+  G+   LVTL L  N L
Sbjct: 8   LERLTTLNLGNHALTSLPESFGGLASLVELNLYNNALASLPESFGDLASLVTLFLNDNAL 67

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
            ++P+  G L +L  L L  N L S+PE+      L E  + G AL+SLP+     L S+
Sbjct: 68  ASLPESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESF-GDLASL 126

Query: 335 NNITLSRNKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
             + L  N   + P S G  +  S+ ++N   N +  +P   F     L  + + +N L 
Sbjct: 127 VTLYLHNNALASLPESFG--ELESLVTLNLHTNALKSLPES-FGDLAILVTLYLHENALA 183

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           SLP   G    LT LNL  N ++ L E   +L +L  L L++N L  LP S G L  L+ 
Sbjct: 184 SLPESFGDLERLTTLNLYNNALASLPESFGDLASLVTLYLNDNALASLPESFGGLESLEH 243

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           LDL +N L SLP   G L  L  L L++N L SLP + G L++L  L +  N L S+PE 
Sbjct: 244 LDLNDNALASLPESFGGLASLVTLYLRNNALASLPESFGDLSSLVTLELRNNTLTSLPES 303

Query: 514 IGTLENLHTLYLNDN 528
            G LE+L TLYLNDN
Sbjct: 304 FGGLESLVTLYLNDN 318



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/315 (34%), Positives = 160/315 (50%), Gaps = 7/315 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E +  L+L   ++T LP S   L  L EL LY N LASLP   G + +L  L L +N+L 
Sbjct: 9   ERLTTLNLGNHALTSLPESFGGLASLVELNLYNNALASLPESFGDLASLVTLFLNDNALA 68

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP+S   L  L  L L +N L  LP     L+SL  L L  N + ++      L++L  
Sbjct: 69  SLPESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESFGDLASLVT 128

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N +  LP   GEL++LVTL+L  N L+ LP+  G+  +LVTL L  N L ++P+ 
Sbjct: 129 LYLHNNALASLPESFGELESLVTLNLHTNALKSLPESFGDLAILVTLYLHENALASLPES 188

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
            G+L  LT L L  N L S+PE+      L    +   AL+SLP+     L S+ ++ L+
Sbjct: 189 FGDLERLTTLNLYNNALASLPESFGDLASLVTLYLNDNALASLPES-FGGLESLEHLDLN 247

Query: 341 RNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
            N   + P   GG     ++Y     +N +  +P   F    +L  + +++N LTSLP  
Sbjct: 248 DNALASLPESFGGLASLVTLY---LRNNALASLPES-FGDLSSLVTLELRNNTLTSLPES 303

Query: 399 LGTWVGLTELNLGTN 413
            G    L  L L  N
Sbjct: 304 FGGLESLVTLYLNDN 318



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/306 (35%), Positives = 156/306 (50%), Gaps = 6/306 (1%)

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP   G L+ L TL+L ++ L  LP+  G    LV L+L +N L ++P+  G+L +L  L
Sbjct: 1   LPESFGGLERLTTLNLGNHALTSLPESFGGLASLVELNLYNNALASLPESFGDLASLVTL 60

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP-S 349
            L+ N L S+PE+      L    +   AL+SLP+     L+S+  + L  N   + P S
Sbjct: 61  FLNDNALASLPESFGGLASLEYLMLYNNALASLPESF-GGLSSLVELRLGGNALASLPES 119

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
            G     S+ ++   +N +  +P   F   ++L  +N+  N L SLP   G    L  L 
Sbjct: 120 FG--DLASLVTLYLHNNALASLPES-FGELESLVTLNLHTNALKSLPESFGDLAILVTLY 176

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           L  N ++ L E   +L  L  L L NN L  LP S G+L  L  L L +N L SLP   G
Sbjct: 177 LHENALASLPESFGDLERLTTLNLYNNALASLPESFGDLASLVTLYLNDNALASLPESFG 236

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            L+ L+ L L  N L SLP + G L +L  L +  N L S+PE  G L +L TL L +NT
Sbjct: 237 GLESLEHLDLNDNALASLPESFGGLASLVTLYLRNNALASLPESFGDLSSLVTLELRNNT 296

Query: 530 CLNNIP 535
            L ++P
Sbjct: 297 -LTSLP 301



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/344 (33%), Positives = 156/344 (45%), Gaps = 26/344 (7%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LP S   L  L  L L  + L SLP   G + +L  L L  N+L SLP+S  +L  L  L
Sbjct: 1   LPESFGGLERLTTLNLGNHALTSLPESFGGLASLVELNLYNNALASLPESFGDLASLVTL 60

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
            L  N L  LP     L SL+ L L  N + ++      LS+L  L +  N +  LP   
Sbjct: 61  FLNDNALASLPESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESF 120

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
           G+L +LVTL L +N L  LP+  G    LVTL+L  N L ++P+  G+L  L  L L  N
Sbjct: 121 GDLASLVTLYLHNNALASLPESFGELESLVTLNLHTNALKSLPESFGDLAILVTLYLHEN 180

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
            L S+PE+      L   N+   AL+SLP+     L S+  + L+ N   + P       
Sbjct: 181 ALASLPESFGDLERLTTLNLYNNALASLPES-FGDLASLVTLYLNDNALASLPES----- 234

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
                               F   ++L  +++ DN L SLP   G    L  L L  N +
Sbjct: 235 --------------------FGGLESLEHLDLNDNALASLPESFGGLASLVTLYLRNNAL 274

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           + L E   +L +L  L L NN L  LP S G L  L  L L +N
Sbjct: 275 ASLPESFGDLSSLVTLELRNNTLTSLPESFGGLESLVTLYLNDN 318



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 94/183 (51%), Gaps = 1/183 (0%)

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
           F   + L+ +N+ ++ LTSLP   G    L ELNL  N ++ L E   +L +L  L L++
Sbjct: 5   FGGLERLTTLNLGNHALTSLPESFGGLASLVELNLYNNALASLPESFGDLASLVTLFLND 64

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N L  LP S G L  L+ L L  N L SLP   G L  L  L L  N L SLP + G L 
Sbjct: 65  NALASLPESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESFGDLA 124

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           +L  L +  N L S+PE  G LE+L TL L+ N  L ++P      + L  + L    L+
Sbjct: 125 SLVTLYLHNNALASLPESFGELESLVTLNLHTN-ALKSLPESFGDLAILVTLYLHENALA 183

Query: 556 QIP 558
            +P
Sbjct: 184 SLP 186



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 88/164 (53%), Gaps = 1/164 (0%)

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP   G    LT LNLG + ++ L E    L +L  L L NN L  LP S G+L  L  L
Sbjct: 1   LPESFGGLERLTTLNLGNHALTSLPESFGGLASLVELNLYNNALASLPESFGDLASLVTL 60

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            L +N L SLP   G L  L+ L+L +N L SLP + G L++L  L +G N L S+PE  
Sbjct: 61  FLNDNALASLPESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESF 120

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           G L +L TLYL++N  L ++P       +L  ++L    L  +P
Sbjct: 121 GDLASLVTLYLHNN-ALASLPESFGELESLVTLNLHTNALKSLP 163


>gi|296209726|ref|XP_002751658.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Callithrix jacchus]
          Length = 860

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 247/505 (48%), Gaps = 53/505 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++S + I+H+P  + +L ++ +L+   N + + PS +  + NL  L L +N L  LPD+
Sbjct: 216 LNVSHNHISHIPKEMLQLGNIRQLFFNNNYIENFPSDLECLGNLEILSLGKNKLRHLPDT 275

Query: 166 LANLQQLRVLDLRHNKL-----------------------NELPMVVYKLTSLKILYLRF 202
           L +L+ LR+L+L +N+L                       + LP  + +L +L+ L L  
Sbjct: 276 LPSLKNLRILNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLLDH 335

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N++  +  +I +L  +  L + DNK+  +  ++   + L  L L  N L+ +P++I  C 
Sbjct: 336 NKLTFLAVEIFHLLKIKELQLADNKLEVISHKIENFRELRILILDKNVLKNIPEKISYCV 395

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           ML  L L  N+L  +P  +  L NL +L ++ N +  + + +S   ++      G  ++ 
Sbjct: 396 MLECLSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVKITDNISHLNNICSLEFSGNIITG 455

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P   + +   I  + L+ NK   +P  G     S+  ++   N I +IP  I S +K L
Sbjct: 456 VPIE-IKNCQKITKVELNYNKIMYFPV-GLCALDSLNYLSVNGNYISEIPVDI-SFSKQL 512

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + + +N L        + + L  L+LG NQI K+   I N+++L VL+L  N  +  P
Sbjct: 513 LHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFP 572

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS---------------- 486
             +  L  L+ LDL EN+L+ + ++I  LK +Q+L   SNQ +                 
Sbjct: 573 RELCTLENLRVLDLSENQLQKISSDICKLKGIQKLNFSSNQFIYFPIELCQLQSLEQLNI 632

Query: 487 ----------LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
                     LP  + ++T L  L +  N ++ IP  IG L NL +L+ ++N  ++ +P 
Sbjct: 633 SQIKGKKLTILPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAHNNQ-ISYLPP 691

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEI 561
            L   ++LQ ++L    L+ +PS+I
Sbjct: 692 SLLSLNDLQQLNLSGNNLTALPSDI 716



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 142/481 (29%), Positives = 239/481 (49%), Gaps = 14/481 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + +T  P ++  L  L  L L GN ++SLP +I  + NL  L L  N LT
Sbjct: 280 KNLRILNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLLDHNKLT 339

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            L   + +L +++ L L  NKL  +   +     L+IL L  N +K +   I Y   L  
Sbjct: 340 FLAVEIFHLLKIKELQLADNKLEVISHKIENFRELRILILDKNVLKNIPEKISYCVMLEC 399

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+ DNK+ ELP  + +LKNL  L +  N++ ++   I +   + +L+   N +  +P  
Sbjct: 400 LSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVKITDNISHLNNICSLEFSGNIITGVPIE 459

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           + N   +T++ L+YN++   P  L     LN  +V G  +S +P   +S    + ++ LS
Sbjct: 460 IKNCQKITKVELNYNKIMYFPVGLCALDSLNYLSVNGNYISEIPVD-ISFSKQLLHLELS 518

Query: 341 RNKFTAYPSGGPTQFTSVYSINF---EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            NK   +       F S+ ++ +     NQI KIP  I S   +L  + +  N   + P 
Sbjct: 519 ENKLLIFSE----HFCSLINLKYLDLGKNQIKKIPASI-SNMISLHVLILCCNKFETFPR 573

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           +L T   L  L+L  NQ+ K+S DI  L  ++ L  S+N     P  +  L+ L+ L++ 
Sbjct: 574 ELCTLENLRVLDLSENQLQKISSDICKLKGIQKLNFSSNQFIYFPIELCQLQSLEQLNIS 633

Query: 458 E---NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           +    KL  LP E+  + +L+ L + +N +  +PR IG L NL  L    N +  +P  +
Sbjct: 634 QIKGKKLTILPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAHNNQISYLPPSL 693

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGP-SLIIRYL 573
            +L +L  L L+ N  L  +P ++    +L+ ++ ++ PL + P EI  G     I RYL
Sbjct: 694 LSLNDLQQLNLSGNN-LTALPSDIYNLFSLKEINFEDNPLLRPPMEICKGKQLYTIARYL 752

Query: 574 K 574
           +
Sbjct: 753 Q 753



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 181/383 (47%), Gaps = 32/383 (8%)

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVH-PDIQYLSNLSMLSMRDNKIRELPPELGELKN 240
           L E P    K+  +K LYL  N+I+T    D   L  L  LS+++N +  LP E+  L N
Sbjct: 153 LQEFPKDTLKIKYVKYLYLDKNQIRTFQGADSGDLLGLESLSLQENGLSSLPSEIQSLHN 212

Query: 241 LVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESV 300
           L  L+++HNH+  +PKE+     +  L   +N + N P  L  L NL  L L  N+L  +
Sbjct: 213 LRILNVSHNHISHIPKEMLQLGNIRQLFFNNNYIENFPSDLECLGNLEILSLGKNKLRHL 272

Query: 301 PETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYS 360
           P+TL    +L   N+E   L+  P  L                              + S
Sbjct: 273 PDTLPSLKNLRILNLEYNQLTIFPKALCF-------------------------LPKLIS 307

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
           ++   N I  +P  I    KNL  + +  N LT L +++   + + EL L  N++  +S 
Sbjct: 308 LDLTGNLISSLPKEI-RELKNLETLLLDHNKLTFLAVEIFHLLKIKELQLADNKLEVISH 366

Query: 421 DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQ 480
            I+N   L +L+L  N+LK +P  I     L+CL L +NKL  LP  I  LK L++L + 
Sbjct: 367 KIENFRELRILILDKNVLKNIPEKISYCVMLECLSLSDNKLTELPKNIHKLKNLRKLHVN 426

Query: 481 SNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELAL 540
            N +V +   I HL N+  L    N +  +P EI   + +  + LN N  +    F + L
Sbjct: 427 RNNMVKITDNISHLNNICSLEFSGNIITGVPIEIKNCQKITKVELNYNKIM---YFPVGL 483

Query: 541 CS--NLQIMSLDNCPLSQIPSEI 561
           C+  +L  +S++   +S+IP +I
Sbjct: 484 CALDSLNYLSVNGNYISEIPVDI 506


>gi|194380802|dbj|BAG58554.1| unnamed protein product [Homo sapiens]
          Length = 610

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 125/411 (30%), Positives = 195/411 (47%), Gaps = 27/411 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P  +     L I+    N I  +      
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ 136

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  N L+ LPK +   T L  LDL  NE 
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEF 196

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  L  L    +  NRL  +P                        G + SL  +
Sbjct: 197 TEVPEVLEQLSGLKEFWMDANRLTFIP------------------------GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N       G  T   ++  +    N + ++P  I S  KN++ + + +N L  
Sbjct: 233 TYLDVSKNNIEMVEEGIST-CENLQDLLLSSNSLQQLPETIGS-LKNITTLKIDENQLMY 290

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G  + + EL+   N++  L   I  L NL      +N L++LP  IG+ + +  L
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
            L  NKLE+LP E+G +++L+ + L  N+L +LP +   L  L+ + + +N
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 194/386 (50%), Gaps = 28/386 (7%)

Query: 174 VLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            LD  H  L ++P  ++    +L+ LYL  N+I+ +   +    +L  LS+ DN +  LP
Sbjct: 26  TLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLP 85

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             +  L NL  LD++ N ++E P+ I NC +L  ++   N +  +PD    L+NLT+L L
Sbjct: 86  ASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYL 145

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           +   LE +P    +   L    +    L  LP   ++ LT +  + L  N+FT  P    
Sbjct: 146 NDAFLEFLPANFGRLTKLQILELRENQLKMLPK-TMNRLTQLERLDLGSNEFTEVPE--- 201

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                                 +  +   L +  M  N LT +P  +G+   LT L++  
Sbjct: 202 ----------------------VLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSK 239

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N I  + E I    NL+ L+LS+N L++LP +IG+L+ +  L ++EN+L  LP+ IG L 
Sbjct: 240 NNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLI 299

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            ++ L    N++ +LP +IG LTNL   +   N LQ +P EIG+ +N+  L+L+ N  L 
Sbjct: 300 SVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNK-LE 358

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIP 558
            +P E+     L++++L +  L  +P
Sbjct: 359 TLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|260806259|ref|XP_002598002.1| hypothetical protein BRAFLDRAFT_134756 [Branchiostoma floridae]
 gi|229283272|gb|EEN54014.1| hypothetical protein BRAFLDRAFT_134756 [Branchiostoma floridae]
          Length = 489

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 215/450 (47%), Gaps = 36/450 (8%)

Query: 131 LYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVY 190
           L G  L S+P+++   T++ CL L+ N LTS+P  +  LQ+LR L+L HN L +LP    
Sbjct: 6   LSGKGLTSVPAEVFDATDIECLVLSNNRLTSIPKEIGQLQKLRELNLDHNLLTQLPQA-- 63

Query: 191 KLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
                                I  L NL  +++  NK+  LP  +  LKNL  LDL+ N 
Sbjct: 64  ---------------------ITTLPNLQRINVSYNKLEALPDGISRLKNLQYLDLSWNG 102

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           LE LP  +G    L  L +  N   ++PD + NL N+ +L LS NR+  +P TLS+   L
Sbjct: 103 LESLPDGVGELEQLTCLHITGNRFTSVPDTIMNLSNIEKLDLSRNRISRLPLTLSRLAKL 162

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK 370
            + N+ G  L + P     +LT   ++ LS N    +    P       +I+     +  
Sbjct: 163 KDMNITGNPL-TYPSTDFENLT---DVRLS-NFLLNFLGLKPKVVNGFLTIDLNGKGLTS 217

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           +P  +F  A ++ ++ + +N LTS+P ++G    L EL L  N +++L + I  L NL+ 
Sbjct: 218 VPAEVFD-ATDVERLVLSNNRLTSIPEEIGQLQKLRELKLKNNLLTQLPQVISTLPNLQH 276

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA 490
           + +++N L+ LP  I  L +L  L +  N+ + +P E+  L +L    +  N L   P  
Sbjct: 277 IDVTDNKLETLPGGISRL-QLHELYVPNNRFKKIPEEVCSLLQLNTFYVGYNPLKCFPDK 335

Query: 491 IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN---IPFELALCSNLQIM 547
           I  LT L  + +        P ++  L+ L  LY+ D         +P  +    NLQ++
Sbjct: 336 ISQLTGLRKMHMSRCQFDEFPRQVLQLQGLEELYMADWAWEGKPSPVPEGIGRLKNLQVL 395

Query: 548 SLDNCPLSQIPSEIVVGGPSLIIRYLKMQG 577
            L    L  +P  +   G  + +RYL ++G
Sbjct: 396 DLRESGLECLPDSV---GELVQLRYLDIKG 422



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 242/502 (48%), Gaps = 45/502 (8%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           +L +DLS   +T +P  V   T +E L L  N+L S+P +IG +  L  L L  N LT L
Sbjct: 1   LLTIDLSGKGLTSVPAEVFDATDIECLVLSNNRLTSIPKEIGQLQKLRELNLDHNLLTQL 60

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P ++  L  L+ +++ +NKL  LP  + +L +L+ L L +N ++++   +  L  L+ L 
Sbjct: 61  PQAITTLPNLQRINVSYNKLEALPDGISRLKNLQYLDLSWNGLESLPDGVGELEQLTCLH 120

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N+   +P  +  L N+  LDL+ N +  LP  +     L  +++  N L   P    
Sbjct: 121 ITGNRFTSVPDTIMNLSNIEKLDLSRNRISRLPLTLSRLAKLKDMNITGNPLT-YPST-- 177

Query: 283 NLINLTRLRLS---YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
           +  NLT +RLS    N L   P+ ++  + +   ++ G  L+S+P  +  + T +  + L
Sbjct: 178 DFENLTDVRLSNFLLNFLGLKPKVVNGFLTI---DLNGKGLTSVPAEVFDA-TDVERLVL 233

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           S N+ T+ P     Q   +  +  ++N + ++P  + S   NL  +++ DN L +LP  +
Sbjct: 234 SNNRLTSIPE-EIGQLQKLRELKLKNNLLTQLPQ-VISTLPNLQHIDVTDNKLETLPGGI 291

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE-- 457
            + + L EL +  N+  K+ E++ +L+ L    +  N LK  P  I  L  L+ + +   
Sbjct: 292 -SRLQLHELYVPNNRFKKIPEEVCSLLQLNTFYVGYNPLKCFPDKISQLTGLRKMHMSRC 350

Query: 458 -------------------------ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
                                    E K   +P  IG LK LQ L L+ + L  LP ++G
Sbjct: 351 QFDEFPRQVLQLQGLEELYMADWAWEGKPSPVPEGIGRLKNLQVLDLRESGLECLPDSVG 410

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN--TCLNNIPFELALCSNLQIMSLD 550
            L  L YL +  N   S+PE++  L N+  L L+ N  +CL   P  L+  + L+ M++ 
Sbjct: 411 ELVQLRYLDIKGNRFTSVPEQVMNLSNIKKLILSHNRISCL---PLNLSRLAQLEDMNIT 467

Query: 551 NCPLSQIPSEIVVGGPSLIIRY 572
             PL+  P ++   G + I+ +
Sbjct: 468 GNPLTYPPPDVRKKGTAAIMDF 489



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 212/433 (48%), Gaps = 43/433 (9%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  +++S + +  LP  + +L +L+ L L  N L SLP  +G +  LTCL +  N  TS
Sbjct: 69  NLQRINVSYNKLEALPDGISRLKNLQYLDLSWNGLESLPDGVGELEQLTCLHITGNRFTS 128

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM- 220
           +PD++ NL  +  LDL  N+++ LP+ + +L  LK + +  N +     D + L+++ + 
Sbjct: 129 VPDTIMNLSNIEKLDLSRNRISRLPLTLSRLAKLKDMNITGNPLTYPSTDFENLTDVRLS 188

Query: 221 -------------------LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
                              + +    +  +P E+ +  ++  L L++N L  +P+EIG  
Sbjct: 189 NFLLNFLGLKPKVVNGFLTIDLNGKGLTSVPAEVFDATDVERLVLSNNRLTSIPEEIGQL 248

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L  L L++N L  +P ++  L NL  + ++ N+LE++P  +S+ + L+E  V      
Sbjct: 249 QKLRELKLKNNLLTQLPQVISTLPNLQHIDVTDNKLETLPGGISR-LQLHELYVPNNRFK 307

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
            +P+  + SL  +N   +  N    +P    +Q T +  ++    Q D+ P  +  + + 
Sbjct: 308 KIPEE-VCSLLQLNTFYVGYNPLKCFPD-KISQLTGLRKMHMSRCQFDEFPRQVL-QLQG 364

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           L ++ M D            W G         + S + E I  L NL+VL L  + L+ L
Sbjct: 365 LEELYMAD----------WAWEG---------KPSPVPEGIGRLKNLQVLDLRESGLECL 405

Query: 442 PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLS 501
           P S+G L +L+ LD++ N+  S+P ++  L  +++LIL  N++  LP  +  L  L  ++
Sbjct: 406 PDSVGELVQLRYLDIKGNRFTSVPEQVMNLSNIKKLILSHNRISCLPLNLSRLAQLEDMN 465

Query: 502 VGENNLQSIPEEI 514
           +  N L   P ++
Sbjct: 466 ITGNPLTYPPPDV 478



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 55/98 (56%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL +S +  LP SV +L  L  L + GN+  S+P Q+  ++N+  L L+ N ++
Sbjct: 390 KNLQVLDLRESGLECLPDSVGELVQLRYLDIKGNRFTSVPEQVMNLSNIKKLILSHNRIS 449

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL 198
            LP +L+ L QL  +++  N L   P  V K  +  I+
Sbjct: 450 CLPLNLSRLAQLEDMNITGNPLTYPPPDVRKKGTAAIM 487


>gi|387016666|gb|AFJ50452.1| Protein LAP2 [Crotalus adamanteus]
          Length = 1450

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 131/417 (31%), Positives = 195/417 (46%), Gaps = 29/417 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLYKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P  +     L I+    N I  +      
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGFSQ 136

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  N L+ LPK +   T L  LDL  NE 
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEF 196

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  L  L    +  N+L  VP  +    HL   ++    + +L +G +S   S+
Sbjct: 197 TEVPEVLEQLSGLKEFWMDDNKLTLVPGFMGSLKHLTYLDISKNNIETLEEG-VSGCESL 255

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                         G     K L+ + + +N L  
Sbjct: 256 QDLLLSSNSLQQLPES----------------------IGCL---KKLTVLKIDENQLMY 290

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G  + + EL+   N+I  L   I  L N+      +N L +LP  IGN + +  L
Sbjct: 291 LPDSIGGLIAIEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPPEIGNWKYVTVL 350

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
            L  NKLE LP E+G +++L+ + L  N+L  LP +I  L +L+ L + +N  QS P
Sbjct: 351 FLHSNKLEVLPEEMGDMQKLKVINLSDNRLKYLPYSILQLQHLTALWLSDN--QSKP 405



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 194/390 (49%), Gaps = 28/390 (7%)

Query: 174 VLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            LD  H  L ++P  ++    +L+ LYL  N+I+ +   +    +L  LS+ DN +  LP
Sbjct: 26  ALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLYKLSLPDNDLTTLP 85

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             +  L NL  LD++ N ++E P+ I NC +L  ++   N +  +PD    L+NLT+L L
Sbjct: 86  ASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGFSQLLNLTQLYL 145

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           +   LE +P    +   L    +    L  LP   ++ LT +  + L  N+FT  P    
Sbjct: 146 NDAFLEFLPANFGRLTKLQILELRENQLKMLPK-TMNRLTQLERLDLGSNEFTEVPE--- 201

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                                 +  +   L +  M DN LT +P  +G+   LT L++  
Sbjct: 202 ----------------------VLEQLSGLKEFWMDDNKLTLVPGFMGSLKHLTYLDISK 239

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N I  L E +    +L+ L+LS+N L++LP SIG L+KL  L ++EN+L  LP+ IG L 
Sbjct: 240 NNIETLEEGVSGCESLQDLLLSSNSLQQLPESIGCLKKLTVLKIDENQLMYLPDSIGGLI 299

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            ++ L    N++ +LP +IG L+N+   +   N L  +P EIG  + +  L+L+ N  L 
Sbjct: 300 AIEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPPEIGNWKYVTVLFLHSNK-LE 358

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
            +P E+     L++++L +  L  +P  I+
Sbjct: 359 VLPEEMGDMQKLKVINLSDNRLKYLPYSIL 388



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 185/390 (47%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ I   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 93  NLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEF 152

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +L++L+LR N+L  LP  + +LT L+ L L  N    V   ++ LS L   
Sbjct: 153 LPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEF 212

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M DNK+  +P  +G LK+L  LD++ N++E L + +  C  L  L L  N L  +P+ +
Sbjct: 213 WMDDNKLTLVPGFMGSLKHLTYLDISKNNIETLEEGVSGCESLQDLLLSSNSLQQLPESI 272

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P+++   + + E +     + +LP    SS+  ++NI    
Sbjct: 273 GCLKKLTVLKIDENQLMYLPDSIGGLIAIEELDCSFNEIETLP----SSIGQLSNI---- 324

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
             F A                 +HN                         LT LP ++G 
Sbjct: 325 RTFAA-----------------DHN------------------------FLTQLPPEIGN 343

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
           W  +T L L +N++  L E++ ++  L+V+ LS+N LK LP SI  L+ L  L L +N+ 
Sbjct: 344 WKYVTVLFLHSNKLEVLPEEMGDMQKLKVINLSDNRLKYLPYSILQLQHLTALWLSDNQS 403

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           + L P +     E Q  ++ +      PR+
Sbjct: 404 KPLIPLQKEVDPETQETVVTNYMFPQQPRS 433



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 158/310 (50%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N++  V   +  L +L+ L +  N I  L   +   ++L  L L+ N L++LP+ IG  
Sbjct: 216 DNKLTLVPGFMGSLKHLTYLDISKNNIETLEEGVSGCESLQDLLLSSNSLQQLPESIGCL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L  L +  N+L+ +PD +G LI +  L  S+N +E++P ++ +  ++  F  +   L+
Sbjct: 276 KKLTVLKIDENQLMYLPDSIGGLIAIEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLT 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +   +  + L  NK    P   G  Q   V  IN   N++  +PY I  + +
Sbjct: 336 QLPPE-IGNWKYVTVLFLHSNKLEVLPEEMGDMQKLKV--INLSDNRLKYLPYSIL-QLQ 391

Query: 381 NLSKVNMKDN 390
           +L+ + + DN
Sbjct: 392 HLTALWLSDN 401


>gi|219520192|gb|AAI44076.1| ERBB2IP protein [Homo sapiens]
          Length = 1419

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEVLPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEVLPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 159/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E +P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEVLPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|28972678|dbj|BAC65755.1| mKIAA1225 protein [Mus musculus]
          Length = 1401

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 201/422 (47%), Gaps = 39/422 (9%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 42  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 101

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 102 PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 138

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 139 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 198

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 199 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIP-GFIGSLRQL 257

Query: 335 NNITLSRNKFTAYPSG-----GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
             + +S+N       G      P  F          N + ++P  I S  KN++ + + +
Sbjct: 258 TYLDVSKNNIEMVEEGISTCENPQDFL------LSSNSLQQLPETIGS-LKNVTTLKIDE 310

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
           N L  LP  +G    + EL+   N+I  L   I  L N+      +N L++LP  IGN +
Sbjct: 311 NQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWK 370

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            +  L L  NKLE+LP E+G +++L+ + L  N+L +LP +   L  L+ + + +N  QS
Sbjct: 371 NITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN--QS 428

Query: 510 IP 511
            P
Sbjct: 429 KP 430



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 192/386 (49%), Gaps = 28/386 (7%)

Query: 174 VLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            LD  H  L ++P  ++    +L+ LYL  N+I+ +   +    +L  LS+ DN +  LP
Sbjct: 51  TLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLP 110

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             +  L NL  LD++ N ++E P+ I NC +L  ++   N +  +PD    L+NLT+L L
Sbjct: 111 ASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYL 170

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           +   LE +P    +   L    +    L  LP   ++ LT +  + L  N+FT  P    
Sbjct: 171 NDAFLEFLPANFGRLTKLQILELRENQLKMLPK-TMNRLTQLERLDLGSNEFTEVPE--- 226

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                                 +  +   L +  M  N LT +P  +G+   LT L++  
Sbjct: 227 ----------------------VLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSK 264

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N I  + E I    N +  +LS+N L++LP +IG+L+ +  L ++EN+L  LP+ IG L+
Sbjct: 265 NNIEMVEEGISTCENPQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLR 324

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            ++ L    N++ +LP +IG LTN+   +   N LQ +P EIG  +N+  L+L+ N  L 
Sbjct: 325 SIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHCNK-LE 383

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIP 558
            +P E+     L++++L +  L  +P
Sbjct: 384 TLPEEMGDMQKLKVINLSDNRLKNLP 409



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 157/310 (50%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 121 ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 180

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ L+  ++ 
Sbjct: 181 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMD 240

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +N     L+ N L++LP+ IG+ 
Sbjct: 241 GNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENPQDFLLSSNSLQQLPETIGSL 300

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L ++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 301 KNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQ 360

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 361 QLPPE-IGNWKNITVLFLHCNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 416

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 417 QLTAMWLSDN 426


>gi|390459893|ref|XP_003732381.1| PREDICTED: LOW QUALITY PROTEIN: protein LAP2-like [Callithrix
           jacchus]
          Length = 1412

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 210/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFNFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISACENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 159/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGLL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|402871705|ref|XP_003899794.1| PREDICTED: protein LAP2 isoform 1 [Papio anubis]
          Length = 1370

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  ++  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNVTVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  +   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMVEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|402871709|ref|XP_003899796.1| PREDICTED: protein LAP2 isoform 3 [Papio anubis]
          Length = 1301

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  ++  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNVTVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 117/222 (52%), Gaps = 25/222 (11%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            + NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I
Sbjct: 53  LDANQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENI 111

Query: 423 QN-----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           +N                       L+NL  L L++  L+ LP++ G L KL+ L+L EN
Sbjct: 112 KNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELREN 171

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L+ LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ 
Sbjct: 172 QLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQ 231

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L ++ N  +  +   ++ C NLQ + L +  L Q+P  I
Sbjct: 232 LTYLDVSKNN-IEMVEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|402871707|ref|XP_003899795.1| PREDICTED: protein LAP2 isoform 2 [Papio anubis]
          Length = 1418

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  ++  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNVTVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  +   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMVEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|116497081|gb|AAI26465.1| Erbb2 interacting protein [Homo sapiens]
          Length = 1371

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 210/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 159/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGLL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|418701717|ref|ZP_13262639.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759281|gb|EKR25496.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 379

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 120/310 (38%), Positives = 172/310 (55%), Gaps = 7/310 (2%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+ + LP E+G+LKNL  L+L  N L  LPKEIG    L  L+L  N++  IP  
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNIT 338
           +  L  L  L L  N+L ++P+ + +   L    +    L++LP   G L +L S+N   
Sbjct: 113 IEKLQKLQWLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLN--- 169

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           LS N+    P     +   + S+  ++NQ+  +P  I  + +NL  +++  N LT+LP +
Sbjct: 170 LSYNQIKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEI-GQLQNLQSLDLSTNRLTTLPQE 227

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L +L L +NQ++ L  +I  L NL+ L L NN L  L   I  L+ LK LDL  
Sbjct: 228 IGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRS 287

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L   P EIG LK LQ L L SNQL +LP  IG L NL  L +  N L ++P+EIG L+
Sbjct: 288 NQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLQNLKVLFLNNNQLTTLPKEIGQLK 347

Query: 519 NLHTLYLNDN 528
           NL  LYLN+N
Sbjct: 348 NLQELYLNNN 357



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 121/346 (34%), Positives = 190/346 (54%), Gaps = 11/346 (3%)

Query: 145 YVTNLTCLGLAENS----LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           ++ +L+C   AE S     T L  +L N  ++R LDL  N+   LP  + KL +L+ L L
Sbjct: 19  FLIHLSCEIQAEESESGTYTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNL 78

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
             N++  +  +I  L NL  L++  N+I+ +P E+ +L+ L  L L  N L  LP+EIG 
Sbjct: 79  NKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTLPQEIGQ 138

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  L L  N+L  +P  +G L NL  L LSYN+++++P+ + K   L    ++   L
Sbjct: 139 LQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQL 198

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
           ++LP  +   L ++ ++ LS N+ T  P   G       +Y ++   NQ+  +P  I  +
Sbjct: 199 TTLPQEI-GQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVS---NQLTILPNEI-GQ 253

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
            KNL  +N+++N LT+L  ++     L  L+L +NQ++   ++I  L NL+VL L +N L
Sbjct: 254 LKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQL 313

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
             LP  IG L+ LK L L  N+L +LP EIG LK LQ L L +NQ 
Sbjct: 314 TTLPEGIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQF 359



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 186/351 (52%), Gaps = 26/351 (7%)

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
            + T L  +++    +  L L  N+  +LP +IG + NL  L L +N LT LP  +  L+
Sbjct: 35  GTYTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLK 94

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
            LR L+L  N++  +P  + KL  L+ LYL  N++ T+  +I  L  L  L +  N++  
Sbjct: 95  NLRKLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTT 154

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+G+LKNL +L+L++N ++ +PKEI     L +L L +N+L  +P  +G L NL  L
Sbjct: 155 LPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 214

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            LS NRL ++P+ +    +L +  +    L+ LP+ +                       
Sbjct: 215 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI----------------------- 251

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              Q  ++ ++N  +N++  +   I  + +NL  ++++ N LT  P ++G    L  L+L
Sbjct: 252 --GQLKNLQTLNLRNNRLTTLSKEI-EQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDL 308

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
           G+NQ++ L E I  L NL+VL L+NN L  LP  IG L+ L+ L L  N+ 
Sbjct: 309 GSNQLTTLPEGIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQF 359



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 173/319 (54%), Gaps = 27/319 (8%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLDL+ N  + LPKEIG    L  L+L  N+L  +P  +G L NL +L LS N+++++P+
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + K   L    +    L++LP  +   L  +  + L +N+ T  P     Q  ++ S+N
Sbjct: 112 EIEKLQKLQWLYLPKNQLTTLPQEI-GQLQKLQWLYLPKNQLTTLPQE-IGQLKNLKSLN 169

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQI  IP  I  + + L  + + +N LT+LP ++G    L  L+L TN+++ L ++I
Sbjct: 170 LSYNQIKTIPKEI-EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 228

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            +L NL+ L L +N L  LP+ IG L+ L+ L+L  N+L +L  EI  L+ L+ L L+SN
Sbjct: 229 GHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 288

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL   P+ IG L NL  L +G N L ++PE IG L+NL                      
Sbjct: 289 QLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLQNL---------------------- 326

Query: 543 NLQIMSLDNCPLSQIPSEI 561
             +++ L+N  L+ +P EI
Sbjct: 327 --KVLFLNNNQLTTLPKEI 343



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 172/311 (55%), Gaps = 3/311 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS +    LP  + KL +L+EL L  N+L  LP +IG + NL  L L+ N + ++P  
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L+ L L  N+L  LP  + +L  L+ LYL  N++ T+  +I  L NL  L++  
Sbjct: 113 IEKLQKLQWLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I+ +P E+ +L+ L +L L +N L  LP+EIG    L +LDL  N L  +P  +G+L 
Sbjct: 173 NQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L  +P  + +  +L   N+    L++L    +  L ++ ++ L  N+ T
Sbjct: 233 NLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKE-IEQLQNLKSLDLRSNQLT 291

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P     Q  ++  ++   NQ+  +P GI  + +NL  + + +N LT+LP ++G    L
Sbjct: 292 IFPK-EIGQLKNLQVLDLGSNQLTTLPEGI-GQLQNLKVLFLNNNQLTTLPKEIGQLKNL 349

Query: 406 TELNLGTNQIS 416
            EL L  NQ S
Sbjct: 350 QELYLNNNQFS 360



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/212 (39%), Positives = 124/212 (58%), Gaps = 5/212 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L+LS + I  +P  +EKL  L+ L L  N+L +LP +IG + NL  L L+ N LT
Sbjct: 163 KNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLT 222

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  + +LQ L+ L L  N+L  LP  + +L +L+ L LR NR+ T+  +I+ L NL  
Sbjct: 223 TLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKS 282

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +R N++   P E+G+LKNL  LDL  N L  LP+ IG    L  L L +N+L  +P  
Sbjct: 283 LDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLQNLKVLFLNNNQLTTLPKE 342

Query: 281 LGNLINLTRLRLSYNRL-----ESVPETLSKC 307
           +G L NL  L L+ N+      E + + L KC
Sbjct: 343 IGQLKNLQELYLNNNQFSIEEKERIRKLLPKC 374



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 88/146 (60%), Gaps = 1/146 (0%)

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           + L++ +QN + +  L LS N  K LP  IG L+ L+ L+L +N+L  LP EIG LK L+
Sbjct: 38  TDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 97

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
           +L L +NQ+ ++P+ I  L  L +L + +N L ++P+EIG L+ L  LYL  N  L  +P
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQ-LTTLP 156

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEI 561
            E+    NL+ ++L    +  IP EI
Sbjct: 157 QEIGQLKNLKSLNLSYNQIKTIPKEI 182



 Score = 38.5 bits (88), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)

Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
           +S     L +A+ +   +  L +  N  +++P+EIG L+NL  L LN N  L  +P E+ 
Sbjct: 33  ESGTYTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQ-LTILPKEIG 91

Query: 540 LCSNLQIMSLDNCPLSQIPSEI 561
              NL+ ++L    +  IP EI
Sbjct: 92  QLKNLRKLNLSANQIKTIPKEI 113


>gi|402871711|ref|XP_003899797.1| PREDICTED: protein LAP2 isoform 4 [Papio anubis]
          Length = 1345

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  ++  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNVTVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  +   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMVEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|170586680|ref|XP_001898107.1| PDZ-domain protein scribble [Brugia malayi]
 gi|158594502|gb|EDP33086.1| PDZ-domain protein scribble, putative [Brugia malayi]
          Length = 1245

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 205/390 (52%), Gaps = 8/390 (2%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEK-LTHLEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F  C  + +  LD  + ++  +P  +++    LEE+YL  N +  L   +     L  L 
Sbjct: 8   FFACNRQ-VDMLDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILS 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L+EN +  LP  +A+L  L  L+L+ N +++LP  +     LKIL L  N I  +   I 
Sbjct: 67  LSENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPQTIT 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L++++ L + D  + ++P ++G L+NL +L++  N L  +P  I     L  LDL HNE
Sbjct: 127 QLTSMTSLGLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVPPSISELNQLRRLDLGHNE 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L ++P+ +G L NL  L +  N LE++PE++ +C  L + +V    L  LPD  +  L  
Sbjct: 187 LDDLPNEIGMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMVLPDE-IGDLEK 245

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           ++++T+++N     P     +   +  +  + N I ++   I S    L+++ + +NLLT
Sbjct: 246 LDDLTVAQNCLQVLPR----RLKKLSILKADRNAITQLTPAIGS-CHALTEIYLTENLLT 300

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            +P  LG    L  LNL  NQ+ +L   I    +L VL L +NL+++LP  IG L  L+ 
Sbjct: 301 EIPSSLGNLKSLRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEIGRLENLRV 360

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           LD+  N+L  LP  +  L +L+ L L  NQ
Sbjct: 361 LDVCNNRLNYLPFTVNVLFKLRALWLSENQ 390



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 196/375 (52%), Gaps = 31/375 (8%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           +++K   RC++  IL+L  S++ +  LP  +  LT+LEEL L GN ++ LP +I     L
Sbjct: 51  DLDKPLFRCRKLKILSL--SENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQL 108

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
             L L+ N +T LP ++  L  +  L L    L ++P  +  L +L+ L +R N ++TV 
Sbjct: 109 KILDLSSNPITRLPQTITQLTSMTSLGLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVP 168

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
           P I  L+ L  L +  N++ +LP E+G L+NL  L +  N LE LP+ I  C  L  LD+
Sbjct: 169 PSISELNQLRRLDLGHNELDDLPNEIGMLENLEELYVDQNDLEALPESIVQCRSLEQLDV 228

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
             N+L+ +PD +G+L  L  L ++ N L+ +P  L K   L+    +  A++ L    + 
Sbjct: 229 SENKLMVLPDEIGDLEKLDDLTVAQNCLQVLPRRLKK---LSILKADRNAITQLTPA-IG 284

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
           S  ++  I L+ N  T  PS       S+ ++N + NQ+ ++P  I     +LS ++++D
Sbjct: 285 SCHALTEIYLTENLLTEIPS-SLGNLKSLRTLNLDKNQLKELPPTIGG-CTSLSVLSLRD 342

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
           NL+  LPL++G                        L NL VL + NN L  LP ++  L 
Sbjct: 343 NLIEQLPLEIG-----------------------RLENLRVLDVCNNRLNYLPFTVNVLF 379

Query: 450 KLKCLDLEENKLESL 464
           KL+ L L EN+ +++
Sbjct: 380 KLRALWLSENQSQAM 394



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 109/196 (55%), Gaps = 2/196 (1%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           N I  +   +F R + L  +++ +N +  LP D+     L ELNL  N +S L E+I+N 
Sbjct: 47  NHIKDLDKPLF-RCRKLKILSLSENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNC 105

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
           + L++L LS+N + +LP +I  L  +  L L +  L  +P++IG L+ L+ L ++ N L 
Sbjct: 106 IQLKILDLSSNPITRLPQTITQLTSMTSLGLNDISLTQMPHDIGHLRNLRSLEVRENLLR 165

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
           ++P +I  L  L  L +G N L  +P EIG LENL  LY++ N  L  +P  +  C +L+
Sbjct: 166 TVPPSISELNQLRRLDLGHNELDDLPNEIGMLENLEELYVDQND-LEALPESIVQCRSLE 224

Query: 546 IMSLDNCPLSQIPSEI 561
            + +    L  +P EI
Sbjct: 225 QLDVSENKLMVLPDEI 240



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 115/225 (51%), Gaps = 6/225 (2%)

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           ++LS N+    PS      T +  +N + N +  +P  I      L  +++  N +T LP
Sbjct: 65  LSLSENEVIRLPSD-IAHLTYLEELNLKGNDVSDLPEEI-KNCIQLKILDLSSNPITRLP 122

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +     +T L L    ++++  DI +L NL  L +  NLL+ +P SI  L +L+ LDL
Sbjct: 123 QTITQLTSMTSLGLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVPPSISELNQLRRLDL 182

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+L+ LPNEIG L+ L+ L +  N L +LP +I    +L  L V EN L  +P+EIG 
Sbjct: 183 GHNELDDLPNEIGMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMVLPDEIGD 242

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           LE L  L +  N CL  +P  L     L I+  D   ++Q+   I
Sbjct: 243 LEKLDDLTVAQN-CLQVLPRRL---KKLSILKADRNAITQLTPAI 283



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 98/209 (46%), Gaps = 46/209 (22%)

Query: 86  QADLN-IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQ-- 142
           Q DL  + +  ++C+  ++  LD+S++ +  LP  +  L  L++L +  N L  LP +  
Sbjct: 207 QNDLEALPESIVQCR--SLEQLDVSENKLMVLPDEIGDLEKLDDLTVAQNCLQVLPRRLK 264

Query: 143 ------------------IGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNE 184
                             IG    LT + L EN LT +P SL NL+ LR L+L  N+L E
Sbjct: 265 KLSILKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKE 324

Query: 185 LPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTL 244
           LP                       P I   ++LS+LS+RDN I +LP E+G L+NL  L
Sbjct: 325 LP-----------------------PTIGGCTSLSVLSLRDNLIEQLPLEIGRLENLRVL 361

Query: 245 DLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
           D+ +N L  LP  +     L  L L  N+
Sbjct: 362 DVCNNRLNYLPFTVNVLFKLRALWLSENQ 390


>gi|380814690|gb|AFE79219.1| protein LAP2 isoform 2 [Macaca mulatta]
 gi|383419995|gb|AFH33211.1| protein LAP2 isoform 2 [Macaca mulatta]
          Length = 1370

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  ++  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNVTVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  +   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMVEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|449278701|gb|EMC86492.1| Protein LAP2 [Columba livia]
          Length = 1413

 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 201/417 (48%), Gaps = 29/417 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + +L  +
Sbjct: 174 KILPKTMSRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIP-GFIGTLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N        G +   S+  +    N + ++P  I S  K ++ + + +N L  
Sbjct: 233 TYLDVSKNNIEVVEE-GISGCESLQDLLLSSNSLQQLPETIGS-LKKVTTLKIDENQLIY 290

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G  + L EL+   N+I  L   I  L N+      +N L +LPS IGN + +  L
Sbjct: 291 LPDSVGGLISLEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVL 350

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
            L  NKLE LP E+G +++L+ + L  N+L +LP     L  L+ + + +N  QS P
Sbjct: 351 FLHSNKLEFLPEEMGDMQKLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDN--QSKP 405



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 193/386 (50%), Gaps = 28/386 (7%)

Query: 174 VLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            LD  H  L ++P  ++    +L+ LYL  N+I+ +   +    +L  LS+ DN +  LP
Sbjct: 26  TLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLP 85

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             +  L NL  LD++ N ++E P+ I NC +L  ++   N +  +PD    L+NLT+L L
Sbjct: 86  ASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYL 145

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           +   LE +P    +   L    +    L  LP   +S LT +  + L  N+FT  P    
Sbjct: 146 NDAFLEFLPANFGRLTKLQILELRENQLKILPK-TMSRLTQLERLDLGSNEFTEVPE--- 201

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                                 +  +   L +  M  N LT +P  +GT   LT L++  
Sbjct: 202 ----------------------VLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSK 239

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N I  + E I    +L+ L+LS+N L++LP +IG+L+K+  L ++EN+L  LP+ +G L 
Sbjct: 240 NNIEVVEEGISGCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLIYLPDSVGGLI 299

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            L+ L    N++ +LP +IG L+N+   +   N L  +P EIG  +++  L+L+ N  L 
Sbjct: 300 SLEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHSNK-LE 358

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIP 558
            +P E+     L++++L +  L  +P
Sbjct: 359 FLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKILPKTMSRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEVVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L  ++ L + EN L  +P+ +G L +L  L  +
Sbjct: 248 GISGCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLIYLPDSVGGLISLEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   SN++  + D+  L+Q+PSEI
Sbjct: 308 FNE-IETLPSSIGQLSNIRTFAADHNFLTQLPSEI 341



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 161/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP +++ L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKILPKTMSRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   ++L  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTLIPGFIGTLKQLTYLDVSKNNIEVVEEGISGCESLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI+L  L  S+N +E++P ++ +  ++  F  +   L+
Sbjct: 276 KKVTTLKIDENQLIYLPDSVGGLISLEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLT 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +   +  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPSE-IGNWKHVTVLFLHSNKLEFLPEEMGDMQKLKV--INLSDNRLKNLPF-TFTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|297294412|ref|XP_001088781.2| PREDICTED: protein LAP2 [Macaca mulatta]
          Length = 1418

 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  ++  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNVTVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  +   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMVEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|380814688|gb|AFE79218.1| protein LAP2 isoform 7 [Macaca mulatta]
          Length = 1301

 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  ++  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNVTVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 117/222 (52%), Gaps = 25/222 (11%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            + NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I
Sbjct: 53  LDANQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENI 111

Query: 423 QN-----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           +N                       L+NL  L L++  L+ LP++ G L KL+ L+L EN
Sbjct: 112 KNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELREN 171

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L+ LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ 
Sbjct: 172 QLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQ 231

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L ++ N  +  +   ++ C NLQ + L +  L Q+P  I
Sbjct: 232 LTYLDVSKNN-IEMVEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|260819644|ref|XP_002605146.1| hypothetical protein BRAFLDRAFT_80919 [Branchiostoma floridae]
 gi|229290477|gb|EEN61156.1| hypothetical protein BRAFLDRAFT_80919 [Branchiostoma floridae]
          Length = 844

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 140/431 (32%), Positives = 224/431 (51%), Gaps = 21/431 (4%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN-LTCLGLAEN 157
           K + +++L+LS + +  +PP++  L +LE L L  N+L  LP  I  + + L  L  + N
Sbjct: 225 KLQRLVSLNLSHNQLDCIPPTIGTLRYLEFLDLSHNQLDFLPDDICNLRHCLVTLHASHN 284

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            LT LPD + NL+++ VLDL  NKL  LP    K  S+  L L  N++ ++   +  L  
Sbjct: 285 RLTQLPDQIHNLRKIHVLDLSENKLTSLPAKFGKTDSVVSLDLSHNQLSSLE-RLAGLGK 343

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L+   N +  LP  +G L +L  LD+AHN ++E+P +IG    L  +D+ HN+L  +
Sbjct: 344 LESLNASYNVLTSLPEGVGSLVSLRVLDIAHNEIKEMPAKIGGLRHLKNVDVSHNKLETL 403

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           PD LG+   L+RL  S+N L ++P  + K   L+  +V    L +LP+     L S++ +
Sbjct: 404 PDTLGDDQLLSRLNASHNALTALPTNMRKLRTLDALDVSRNKLEALPEPF-HFLRSLSFL 462

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            +S NK         T   S+  +    N + ++P  +    K+L  V + D+L +    
Sbjct: 463 DVSDNKLPVL-----TAPRSLTCLKVAGNPL-RLPTRVAGDNKSLI-VRIGDDLRS---- 511

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
                  LTEL++   +++ L   I NL  LE     NN L  LP++   LR+L+ LDL 
Sbjct: 512 -------LTELDISNIELTTLPTTICNLRFLEKFNARNNKLNSLPANFHRLRQLQHLDLA 564

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
            N+L +LP ++G    L  L   +NQ+     ++  L +L YL+   N L S+P+  GTL
Sbjct: 565 HNELTALPPKLGDFAYLSHLDTSNNQVEEFMPSLVKLRSLQYLNFSNNKLTSLPDNFGTL 624

Query: 518 ENLHTLYLNDN 528
             L TL L+ N
Sbjct: 625 SQLTTLDLSAN 635



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 143/474 (30%), Positives = 239/474 (50%), Gaps = 62/474 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E++ +LD++ +++  +P SV +L +L  +    N++ SLP  I   + LT +  A N L 
Sbjct: 90  ESLRSLDVTNNTVRAIPGSVSRLKYLTSIEASTNQIKSLPKTIHKASALTTINAAGNKLK 149

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI-QYLSNLS 219
           +LP ++ +   +  +D   N +  LP  +YKL S   + +  N+++T+   I +   +++
Sbjct: 150 TLPKNIGSSSSITYIDASSNSIKTLPKSIYKLHS--SVNVSNNQLRTLPAVIAKGTCSIN 207

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
           ++    N I  LP  L +L+ LV+L+L+HN L+ +P  IG    L  LDL HN+L  +PD
Sbjct: 208 VIDASRNLIHTLPEGLDKLQRLVSLNLSHNQLDCIPPTIGTLRYLEFLDLSHNQLDFLPD 267

Query: 280 MLGNLIN-LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
            + NL + L  L  S+NRL  +P+     +H                    +L  I+ + 
Sbjct: 268 DICNLRHCLVTLHASHNRLTQLPDQ----IH--------------------NLRKIHVLD 303

Query: 339 LSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
           LS NK T+ P+  G T   SV S++  HNQ+  +     +    L  +N   N+LTSLP 
Sbjct: 304 LSENKLTSLPAKFGKTD--SVVSLDLSHNQLSSLER--LAGLGKLESLNASYNVLTSLP- 358

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
                                 E + +LV+L VL +++N +K++P+ IG LR LK +D+ 
Sbjct: 359 ----------------------EGVGSLVSLRVLDIAHNEIKEMPAKIGGLRHLKNVDVS 396

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
            NKLE+LP+ +G  + L RL    N L +LP  +  L  L  L V  N L+++PE    L
Sbjct: 397 HNKLETLPDTLGDDQLLSRLNASHNALTALPTNMRKLRTLDALDVSRNKLEALPEPFHFL 456

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIR 571
            +L  L ++D    N +P  L    +L  + +   PL ++P+ +     SLI+R
Sbjct: 457 RSLSFLDVSD----NKLPV-LTAPRSLTCLKVAGNPL-RLPTRVAGDNKSLIVR 504



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 210/443 (47%), Gaps = 58/443 (13%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS++ +T LP    K   +  L L  N+L+SL  ++  +  L  L  + N LTSLP+ 
Sbjct: 302 LDLSENKLTSLPAKFGKTDSVVSLDLSHNQLSSL-ERLAGLGKLESLNASYNVLTSLPEG 360

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + +L  LRVLD+ HN++ E+P  +  L  LK + +  N+++T+   +     LS L+   
Sbjct: 361 VGSLVSLRVLDIAHNEIKEMPAKIGGLRHLKNVDVSHNKLETLPDTLGDDQLLSRLNASH 420

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL----------- 274
           N +  LP  + +L+ L  LD++ N LE LP+       L  LD+  N+L           
Sbjct: 421 NALTALPTNMRKLRTLDALDVSRNKLEALPEPFHFLRSLSFLDVSDNKLPVLTAPRSLTC 480

Query: 275 -------VNIPDMLG------------NLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
                  + +P  +             +L +LT L +S   L ++P T+     L +FN 
Sbjct: 481 LKVAGNPLRLPTRVAGDNKSLIVRIGDDLRSLTELDISNIELTTLPTTICNLRFLEKFNA 540

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
               L+SLP      L  + ++ L+ N+ TA P      F  +  ++  +NQ+++    +
Sbjct: 541 RNNKLNSLPANF-HRLRQLQHLDLAHNELTALPPKL-GDFAYLSHLDTSNNQVEEFMPSL 598

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ--------------------- 414
             + ++L  +N  +N LTSLP + GT   LT L+L  NQ                     
Sbjct: 599 V-KLRSLQYLNFSNNKLTSLPDNFGTLSQLTTLDLSANQLPELPNDRIDILASLLVLNAS 657

Query: 415 ---ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
              ++ +  D+  L  ++VL LS N++K LP  I  ++ L  LDL +N LE +P  I  L
Sbjct: 658 GNQVTAIPMDMPYLYRIQVLNLSANVIKALPGDIWRMKSLTTLDLSDNMLEGIPETITKL 717

Query: 472 KELQRLILQSNQLVSLPRAIGHL 494
             ++ + + +N+L S P+ +  L
Sbjct: 718 PSIKSVDISNNKLRSFPKTMERL 740



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 190/398 (47%), Gaps = 32/398 (8%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+ S + +T LP  V  L  L  L +  N++  +P++IG + +L  + ++ N L +LPD+
Sbjct: 347 LNASYNVLTSLPEGVGSLVSLRVLDIAHNEIKEMPAKIGGLRHLKNVDVSHNKLETLPDT 406

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L + Q L  L+  HN L  LP  + KL +L  L +  N+++ +     +L +LS L + D
Sbjct: 407 LGDDQLLSRLNASHNALTALPTNMRKLRTLDALDVSRNKLEALPEPFHFLRSLSFLDVSD 466

Query: 226 NKIR------------------ELPPELG------------ELKNLVTLDLAHNHLEELP 255
           NK+                    LP  +             +L++L  LD+++  L  LP
Sbjct: 467 NKLPVLTAPRSLTCLKVAGNPLRLPTRVAGDNKSLIVRIGDDLRSLTELDISNIELTTLP 526

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
             I N   L   + ++N+L ++P     L  L  L L++N L ++P  L    +L+  + 
Sbjct: 527 TTICNLRFLEKFNARNNKLNSLPANFHRLRQLQHLDLAHNELTALPPKLGDFAYLSHLDT 586

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
               +      L+  L S+  +  S NK T+ P    T  + + +++   NQ+ ++P   
Sbjct: 587 SNNQVEEFMPSLVK-LRSLQYLNFSNNKLTSLPDNFGT-LSQLTTLDLSANQLPELPNDR 644

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
                +L  +N   N +T++P+D+     +  LNL  N I  L  DI  + +L  L LS+
Sbjct: 645 IDILASLLVLNASGNQVTAIPMDMPYLYRIQVLNLSANVIKALPGDIWRMKSLTTLDLSD 704

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           N+L+ +P +I  L  +K +D+  NKL S P  +  L++
Sbjct: 705 NMLEGIPETITKLPSIKSVDISNNKLRSFPKTMERLRQ 742



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 176/413 (42%), Gaps = 81/413 (19%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD++ + I  +P  +  L HL+ + +  NKL +LP  +G    L+ L  + N+LT+LP +
Sbjct: 370 LDIAHNEIKEMPAKIGGLRHLKNVDVSHNKLETLPDTLGDDQLLSRLNASHNALTALPTN 429

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR--------------------- 204
           +  L+ L  LD+  NKL  LP   + L SL  L +  N+                     
Sbjct: 430 MRKLRTLDALDVSRNKLEALPEPFHFLRSLSFLDVSDNKLPVLTAPRSLTCLKVAGNPLR 489

Query: 205 ------------IKTVHPDIQYLSNLSM--------------------LSMRDNKIRELP 232
                       I  +  D++ L+ L +                     + R+NK+  LP
Sbjct: 490 LPTRVAGDNKSLIVRIGDDLRSLTELDISNIELTTLPTTICNLRFLEKFNARNNKLNSLP 549

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
                L+ L  LDLAHN L  LP ++G+   L  LD  +N++      L  L +L  L  
Sbjct: 550 ANFHRLRQLQHLDLAHNELTALPPKLGDFAYLSHLDTSNNQVEEFMPSLVKLRSLQYLNF 609

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           S N+L S+P+       L   ++    L  LP+  +  L S+  +  S N+ TA P   P
Sbjct: 610 SNNKLTSLPDNFGTLSQLTTLDLSANQLPELPNDRIDILASLLVLNASGNQVTAIPMDMP 669

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
             +  +  +N   N I  +P  I+ R K+L+ +++ DN+L  +P                
Sbjct: 670 YLY-RIQVLNLSANVIKALPGDIW-RMKSLTTLDLSDNMLEGIP---------------- 711

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL---DLEENKLE 462
                  E I  L +++ + +SNN L+  P ++  LR+   +   D + NK E
Sbjct: 712 -------ETITKLPSIKSVDISNNKLRSFPKTMERLRQKASVNTSDQDPNKKE 757



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 66/130 (50%), Gaps = 1/130 (0%)

Query: 106 LDLSKSSITHLP-PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           LDLS + +  LP   ++ L  L  L   GN++ ++P  + Y+  +  L L+ N + +LP 
Sbjct: 630 LDLSANQLPELPNDRIDILASLLVLNASGNQVTAIPMDMPYLYRIQVLNLSANVIKALPG 689

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            +  ++ L  LDL  N L  +P  + KL S+K + +  N++++    ++ L   + ++  
Sbjct: 690 DIWRMKSLTTLDLSDNMLEGIPETITKLPSIKSVDISNNKLRSFPKTMERLRQKASVNTS 749

Query: 225 DNKIRELPPE 234
           D    +  PE
Sbjct: 750 DQDPNKKEPE 759


>gi|291394839|ref|XP_002713745.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           [Oryctolagus cuniculus]
          Length = 858

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 244/509 (47%), Gaps = 53/509 (10%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L++S + I H+P  + +L ++ +L+L  N + +  S +  + NL  L L  N +  
Sbjct: 210 NLRILNVSHNQIAHIPKELSQLGNIRQLFLNNNYIETFLSDLESLGNLEILSLGRNKMRH 269

Query: 162 LPDSLANLQQLRVLDLRHNKLN-----------------------ELPMVVYKLTSLKIL 198
           +PD+L +L+ L+VL L +N+L                         LP  + +L  L+ L
Sbjct: 270 IPDTLPSLKNLKVLSLEYNQLTIFPKSLCFLPKLISLNLTGNLIESLPKEIRELKHLEKL 329

Query: 199 YLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
           +L  N++  +  ++  L  +  L + DNK+  +  ++   K L  L L  N L+ +P++I
Sbjct: 330 FLDHNKLTFLAVEMFQLFKIKELQLADNKLELISHKIENFKELRVLILDKNLLKNIPEKI 389

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
            +C ML  L L  N+L ++P  +  L NL +L ++ N +  + E +S    +      G 
Sbjct: 390 SSCGMLECLSLSDNKLSDLPKTIYKLKNLRKLHVNRNNIVKIVEDISHLNKMCSLEFSGN 449

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
            ++ +P   + +   I  + L+ NK   +P G      S+Y ++F  N I +IP  I S 
Sbjct: 450 LITDVPIE-IKNCRKITKVELNYNKIIYFPEGL-CALESLYYLSFSGNYISEIPVDI-SF 506

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
           +  L  + +  N L      L + + L  L+LG NQI K+   +  +V+L VL+L +N  
Sbjct: 507 SNQLLHLALNQNKLLIFSEHLCSLINLRYLDLGKNQIKKVPPSVSKMVSLRVLILYSNKF 566

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV------------- 485
           +  P  +  L  L+ LD  EN+L+++P+EI  LK +Q+L   SNQ +             
Sbjct: 567 ETFPVELCTLENLQVLDFSENQLQTVPSEICNLKGIQKLNFSSNQFIYFPVELCQLQSLE 626

Query: 486 -------------SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
                         +P  + ++T L  L +  N ++ IP+++G L +L  LY  +N  ++
Sbjct: 627 ELNMSQINGRKLTRIPEELSNMTQLKNLDISNNAIREIPKKMGELRSLVNLYAQNNQ-IS 685

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            +P      +NLQ ++L    L+ +P  I
Sbjct: 686 YLPPSFLSLNNLQQLNLSGNNLTALPGAI 714



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 218/437 (49%), Gaps = 6/437 (1%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C    +++L+L+ + I  LP  + +L HLE+L+L  NKL  L  ++  +  +  L LA+N
Sbjct: 298 CFLPKLISLNLTGNLIESLPKEIRELKHLEKLFLDHNKLTFLAVEMFQLFKIKELQLADN 357

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L  +   + N ++LRVL L  N L  +P  +     L+ L L  N++  +   I  L N
Sbjct: 358 KLELISHKIENFKELRVLILDKNLLKNIPEKISSCGMLECLSLSDNKLSDLPKTIYKLKN 417

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N I ++  ++  L  + +L+ + N + ++P EI NC  +  ++L +N+++  
Sbjct: 418 LRKLHVNRNNIVKIVEDISHLNKMCSLEFSGNLITDVPIEIKNCRKITKVELNYNKIIYF 477

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P+ L  L +L  L  S N +  +P  +S    L    +    L    + L  SL ++  +
Sbjct: 478 PEGLCALESLYYLSFSGNYISEIPVDISFSNQLLHLALNQNKLLIFSEHL-CSLINLRYL 536

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            L +N+    P    ++  S+  +    N+ +  P  + +  +NL  ++  +N L ++P 
Sbjct: 537 DLGKNQIKKVPPSV-SKMVSLRVLILYSNKFETFPVELCT-LENLQVLDFSENQLQTVPS 594

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN---NLLKKLPSSIGNLRKLKCL 454
           ++    G+ +LN  +NQ      ++  L +LE L +S      L ++P  + N+ +LK L
Sbjct: 595 EICNLKGIQKLNFSSNQFIYFPVELCQLQSLEELNMSQINGRKLTRIPEELSNMTQLKNL 654

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           D+  N +  +P ++G L+ L  L  Q+NQ+  LP +   L NL  L++  NNL ++P  I
Sbjct: 655 DISNNAIREIPKKMGELRSLVNLYAQNNQISYLPPSFLSLNNLQQLNLSGNNLTALPGAI 714

Query: 515 GTLENLHTLYLNDNTCL 531
             L +L  +  +DN  L
Sbjct: 715 CNLSSLREINFDDNPLL 731


>gi|421110782|ref|ZP_15571273.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803879|gb|EKS10006.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 473

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/327 (36%), Positives = 180/327 (55%), Gaps = 26/327 (7%)

Query: 133 GNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKL 192
           GN+L +LP +IG + NL  L L  N  T+LP+ + NLQ+L+ LDL HN+L  LP  + +L
Sbjct: 151 GNQLTTLPKEIGNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSHNQLTTLPKEIGQL 210

Query: 193 TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLE 252
            +L+ L L  N++ T+  +I  L NL  L +  N++  LP E+G L+NL TLDL  N L 
Sbjct: 211 QNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLA 270

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
            LP+EIGN   L TLDL+ N+L  +P+ +GNL NL  L L  N+L ++P+ + K   L +
Sbjct: 271 ALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQKLKK 330

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
             +    L++LP  +                          +   +  ++ +HNQ+  +P
Sbjct: 331 LYLYNNRLTTLPKEI-------------------------GKLQKLQWLSLDHNQLKTLP 365

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I    +NL  +++  N LT+LP ++G    L  L+L  NQ++ L ++I  L NL++L 
Sbjct: 366 KEI-EDLQNLKILSLGSNQLTTLPKEVGKLQNLIMLDLHGNQLTTLPKEIGKLQNLKMLD 424

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           L  N L  LP  IG L+ LK L+L  N
Sbjct: 425 LHGNQLMTLPKEIGKLQNLKELNLVGN 451



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 126/352 (35%), Positives = 190/352 (53%), Gaps = 42/352 (11%)

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G L+NL TL+L  N    LP+EIGN   L  LDL HN+L  +P  +G L 
Sbjct: 152 NQLTTLPKEIGNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSHNQLTTLPKEIGQLQ 211

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL +L L+ N+L     TLSK +                     +L ++  + L RN+ T
Sbjct: 212 NLQKLNLNSNQLT----TLSKEI--------------------GNLQNLQTLDLGRNQLT 247

Query: 346 AYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
             P   G  Q  ++ +++ E NQ+  +P  I    +NL  ++++ N L +LP ++G    
Sbjct: 248 TLPEEIGNLQ--NLQTLDLEGNQLAALPEEI-GNLQNLQTLDLEGNQLATLPEEIGNLQN 304

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L  L+L  NQ++ L ++I  L  L+ L L NN L  LP  IG L+KL+ L L+ N+L++L
Sbjct: 305 LQTLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPKEIGKLQKLQWLSLDHNQLKTL 364

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P EI  L+ L+ L L SNQL +LP+ +G L NL  L +  N L ++P+EIG L+NL  L 
Sbjct: 365 PKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNLIMLDLHGNQLTTLPKEIGKLQNLKMLD 424

Query: 525 LNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
           L+ N  +  +P E+    NL+ ++L             VG PSL  +  K+Q
Sbjct: 425 LHGNQLM-TLPKEIGKLQNLKELNL-------------VGNPSLRSQKEKIQ 462



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 171/317 (53%), Gaps = 4/317 (1%)

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
           + +T LP  +  L +L+ L L  N+  +LP +IG +  L  L L+ N LT+LP  +  LQ
Sbjct: 152 NQLTTLPKEIGNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSHNQLTTLPKEIGQLQ 211

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
            L+ L+L  N+L  L   +  L +L+ L L  N++ T+  +I  L NL  L +  N++  
Sbjct: 212 NLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLAA 271

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+G L+NL TLDL  N L  LP+EIGN   L TLDL+ N+L  +P  +G L  L +L
Sbjct: 272 LPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQKLKKL 331

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L  NRL ++P+ + K   L   +++   L +LP   +  L ++  ++L  N+ T  P  
Sbjct: 332 YLYNNRLTTLPKEIGKLQKLQWLSLDHNQLKTLPKE-IEDLQNLKILSLGSNQLTTLPK- 389

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              +  ++  ++   NQ+  +P  I  + +NL  +++  N L +LP ++G    L ELNL
Sbjct: 390 EVGKLQNLIMLDLHGNQLTTLPKEI-GKLQNLKMLDLHGNQLMTLPKEIGKLQNLKELNL 448

Query: 411 -GTNQISKLSEDIQNLV 426
            G   +    E IQ L+
Sbjct: 449 VGNPSLRSQKEKIQKLL 465



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 90/217 (41%), Positives = 130/217 (59%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL ++ +T LP  +  L +L+ L L GN+LA+LP +IG + NL  L L  N L 
Sbjct: 234 QNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLAALPEEIGNLQNLQTLDLEGNQLA 293

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ + NLQ L+ LDL  N+L  LP  + KL  LK LYL  NR+ T+  +I  L  L  
Sbjct: 294 TLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPKEIGKLQKLQW 353

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+  N+++ LP E+ +L+NL  L L  N L  LPKE+G    L+ LDL  N+L  +P  
Sbjct: 354 LSLDHNQLKTLPKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNLIMLDLHGNQLTTLPKE 413

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           +G L NL  L L  N+L ++P+ + K  +L E N+ G
Sbjct: 414 IGKLQNLKMLDLHGNQLMTLPKEIGKLQNLKELNLVG 450



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/255 (39%), Positives = 145/255 (56%), Gaps = 14/255 (5%)

Query: 318 CALSSLPDGLLSSLT-SINNITLSRNKFTAYPSGGPTQFTSV----------YSINFEHN 366
           C + +   G+  +LT ++ + T  R      P GG  Q T++           ++N   N
Sbjct: 117 CTIEAKEKGVYYNLTEALQHPTDVRVLDLGPPEGG-NQLTTLPKEIGNLQNLQTLNLNSN 175

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
           Q   +P  I +  K L K+++  N LT+LP ++G    L +LNL +NQ++ LS++I NL 
Sbjct: 176 QFTTLPEEIGNLQK-LQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQ 234

Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
           NL+ L L  N L  LP  IGNL+ L+ LDLE N+L +LP EIG L+ LQ L L+ NQL +
Sbjct: 235 NLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLAALPEEIGNLQNLQTLDLEGNQLAT 294

Query: 487 LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQI 546
           LP  IG+L NL  L +  N L ++P+EIG L+ L  LYL +N  L  +P E+     LQ 
Sbjct: 295 LPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQKLKKLYLYNNR-LTTLPKEIGKLQKLQW 353

Query: 547 MSLDNCPLSQIPSEI 561
           +SLD+  L  +P EI
Sbjct: 354 LSLDHNQLKTLPKEI 368



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/243 (36%), Positives = 138/243 (56%), Gaps = 1/243 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS + +T LP  + +L +L++L L  N+L +L  +IG + NL  L L  N LT+LP+ 
Sbjct: 193 LDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEE 252

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + NLQ L+ LDL  N+L  LP  +  L +L+ L L  N++ T+  +I  L NL  L +  
Sbjct: 253 IGNLQNLQTLDLEGNQLAALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEG 312

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L+ L  L L +N L  LPKEIG    L  L L HN+L  +P  + +L 
Sbjct: 313 NQLTTLPKEIGKLQKLKKLYLYNNRLTTLPKEIGKLQKLQWLSLDHNQLKTLPKEIEDLQ 372

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L ++P+ + K  +L   ++ G  L++LP   +  L ++  + L  N+  
Sbjct: 373 NLKILSLGSNQLTTLPKEVGKLQNLIMLDLHGNQLTTLPKE-IGKLQNLKMLDLHGNQLM 431

Query: 346 AYP 348
             P
Sbjct: 432 TLP 434



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 125/209 (59%), Gaps = 1/209 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +  LP  +  L +L+ L L GN+LA+LP +IG + NL  L L  N LT
Sbjct: 257 QNLQTLDLEGNQLAALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLT 316

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ+L+ L L +N+L  LP  + KL  L+ L L  N++KT+  +I+ L NL +
Sbjct: 317 TLPKEIGKLQKLKKLYLYNNRLTTLPKEIGKLQKLQWLSLDHNQLKTLPKEIEDLQNLKI 376

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+  N++  LP E+G+L+NL+ LDL  N L  LPKEIG    L  LDL  N+L+ +P  
Sbjct: 377 LSLGSNQLTTLPKEVGKLQNLIMLDLHGNQLTTLPKEIGKLQNLKMLDLHGNQLMTLPKE 436

Query: 281 LGNLINLTRLRLSYN-RLESVPETLSKCV 308
           +G L NL  L L  N  L S  E + K +
Sbjct: 437 IGKLQNLKELNLVGNPSLRSQKEKIQKLL 465



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 38/59 (64%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           K +N++ LDL  + +T LP  + KL +L+ L L+GN+L +LP +IG + NL  L L  N
Sbjct: 393 KLQNLIMLDLHGNQLTTLPKEIGKLQNLKMLDLHGNQLMTLPKEIGKLQNLKELNLVGN 451


>gi|218440192|ref|YP_002378521.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
 gi|218172920|gb|ACK71653.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
          Length = 867

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/319 (37%), Positives = 178/319 (55%), Gaps = 10/319 (3%)

Query: 100 EENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL 159
           EE    LDLS   +  LPP +E+LTHL  L L  NKL +LP QIG +  LT L L +N L
Sbjct: 15  EEKAETLDLSFKKLETLPPQIEQLTHLRYLDLRNNKLTTLPPQIGKLKKLTSLNLTDNQL 74

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           ++LP  +  L  L  L L +NKL  LP  + +LT L  LYL  N ++T+   + +L N++
Sbjct: 75  SALPPEIGQLNNLSRLHLSYNKLTNLPEEIGQLTHLSELYLSHNFLETLPTTLNHLVNIN 134

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            LS+  N+   LPP++  L +L   DL +N L  LP EIG    L  LDL +N+L  +P 
Sbjct: 135 RLSLSYNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPEIGQLKSLNQLDLGYNQLTTLPP 194

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNI 337
            +G L  LT L +SYN+L S+P  +   ++L+   +    L++LP   G LS+L S+N  
Sbjct: 195 EIGELYRLTSLDVSYNQLISLPPEIQFLINLDSLTLSNNQLATLPPEIGFLSNLISLN-- 252

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            LS N+ T+ P     Q T +      HN+I+ +P  I    + L+ + +K+N L +LPL
Sbjct: 253 -LSYNQLTSIPP-EIGQLTKLIQFRLSHNKIETLPPEIRCLTQ-LTSLMLKNNQLLALPL 309

Query: 398 D---LGTWVGLTELNLGTN 413
           +   L  +  LT+L++  N
Sbjct: 310 ELIQLVQFFKLTQLDVQEN 328



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 134/377 (35%), Positives = 193/377 (51%), Gaps = 54/377 (14%)

Query: 200 LRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIG 259
           L F +++T+ P I+ L++L  L +R+NK+  LPP++G+LK L +L+L  N L  LP EIG
Sbjct: 23  LSFKKLETLPPQIEQLTHLRYLDLRNNKLTTLPPQIGKLKKLTSLNLTDNQLSALPPEIG 82

Query: 260 NCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA 319
                                   L NL+RL LSYN+L ++PE + +  HL+E  +    
Sbjct: 83  Q-----------------------LNNLSRLHLSYNKLTNLPEEIGQLTHLSELYLSHNF 119

Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           L +LP  L + L +IN ++LS N+FT+ P                  QI     G+ S  
Sbjct: 120 LETLPTTL-NHLVNINRLSLSYNQFTSLPP-----------------QIK----GLIS-- 155

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
             LS  ++ +N LT+LP ++G    L +L+LG NQ++ L  +I  L  L  L +S N L 
Sbjct: 156 --LSWWDLNNNQLTTLPPEIGQLKSLNQLDLGYNQLTTLPPEIGELYRLTSLDVSYNQLI 213

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
            LP  I  L  L  L L  N+L +LP EIGFL  L  L L  NQL S+P  IG LT L  
Sbjct: 214 SLPPEIQFLINLDSLTLSNNQLATLPPEIGFLSNLISLNLSYNQLTSIPPEIGQLTKLIQ 273

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFEL-ALCSNLQIMSLD-NCPLSQI 557
             +  N ++++P EI  L  L +L L +N  L  +P EL  L    ++  LD    L  I
Sbjct: 274 FRLSHNKIETLPPEIRCLTQLTSLMLKNNQLL-ALPLELIQLVQFFKLTQLDVQENLLTI 332

Query: 558 PSEIVV--GGPSLIIRY 572
           P EI+     P LI+ +
Sbjct: 333 PPEIIWRKDEPDLIVNF 349



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 145/250 (58%), Gaps = 1/250 (0%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K + + +L+L+ + ++ LPP + +L +L  L+L  NKL +LP +IG +T+L+ L L+ N 
Sbjct: 60  KLKKLTSLNLTDNQLSALPPEIGQLNNLSRLHLSYNKLTNLPEEIGQLTHLSELYLSHNF 119

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L +LP +L +L  +  L L +N+   LP  +  L SL    L  N++ T+ P+I  L +L
Sbjct: 120 LETLPTTLNHLVNINRLSLSYNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPEIGQLKSL 179

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
           + L +  N++  LPPE+GEL  L +LD+++N L  LP EI     L +L L +N+L  +P
Sbjct: 180 NQLDLGYNQLTTLPPEIGELYRLTSLDVSYNQLISLPPEIQFLINLDSLTLSNNQLATLP 239

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L NL  L LSYN+L S+P  + +   L +F +    + +LP   +  LT + ++ 
Sbjct: 240 PEIGFLSNLISLNLSYNQLTSIPPEIGQLTKLIQFRLSHNKIETLPPE-IRCLTQLTSLM 298

Query: 339 LSRNKFTAYP 348
           L  N+  A P
Sbjct: 299 LKNNQLLALP 308



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 148/274 (54%), Gaps = 8/274 (2%)

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTAY 347
           L LS+ +LE++P  + +  HL   ++    L++LP   G L  LTS+N   L+ N+ +A 
Sbjct: 21  LDLSFKKLETLPPQIEQLTHLRYLDLRNNKLTTLPPQIGKLKKLTSLN---LTDNQLSAL 77

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
           P     Q  ++  ++  +N++  +P  I  +  +LS++ +  N L +LP  L   V +  
Sbjct: 78  PPE-IGQLNNLSRLHLSYNKLTNLPEEI-GQLTHLSELYLSHNFLETLPTTLNHLVNINR 135

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           L+L  NQ + L   I+ L++L    L+NN L  LP  IG L+ L  LDL  N+L +LP E
Sbjct: 136 LSLSYNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPEIGQLKSLNQLDLGYNQLTTLPPE 195

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
           IG L  L  L +  NQL+SLP  I  L NL  L++  N L ++P EIG L NL +L L+ 
Sbjct: 196 IGELYRLTSLDVSYNQLISLPPEIQFLINLDSLTLSNNQLATLPPEIGFLSNLISLNLSY 255

Query: 528 NTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N  L +IP E+   + L    L +  +  +P EI
Sbjct: 256 NQ-LTSIPPEIGQLTKLIQFRLSHNKIETLPPEI 288


>gi|449514350|ref|XP_004177207.1| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Taeniopygia guttata]
          Length = 1452

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 130/417 (31%), Positives = 201/417 (48%), Gaps = 29/417 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + +L  +
Sbjct: 174 KILPKTMSRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIP-GFIGTLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N        G +   S+  +    N + ++P  I S  K ++ + + +N L  
Sbjct: 233 TYLDVSKNNIEVVEE-GISGCESLQDLLLSSNSLQQLPESIGS-LKKVTTLKIDENQLIY 290

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G  + + EL+   N+I  L   +  L N+      +N L +LPS IGN + +  L
Sbjct: 291 LPDSIGGLISVEELDCSFNEIETLPSSVGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVL 350

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
            L  NKLE LP E+G +++L+ + L  N+L +LP     L  L+ + + +N  QS P
Sbjct: 351 FLHSNKLEFLPEEMGDMQKLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDN--QSKP 405



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 193/386 (50%), Gaps = 28/386 (7%)

Query: 174 VLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            LD  H  L ++P  ++    +L+ LYL  N+I+ +   +    +L  LS+ DN +  LP
Sbjct: 26  TLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLP 85

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             +  L NL  LD++ N ++E P+ I NC +L  ++   N +  +PD    L+NLT+L L
Sbjct: 86  ASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYL 145

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           +   LE +P    +   L    +    L  LP   +S LT +  + L  N+FT  P    
Sbjct: 146 NDAFLEFLPANFGRLTKLQILELRENQLKILPK-TMSRLTQLERLDLGSNEFTEVPE--- 201

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                                 +  +   L +  M  N LT +P  +GT   LT L++  
Sbjct: 202 ----------------------VLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSK 239

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N I  + E I    +L+ L+LS+N L++LP SIG+L+K+  L ++EN+L  LP+ IG L 
Sbjct: 240 NNIEVVEEGISGCESLQDLLLSSNSLQQLPESIGSLKKVTTLKIDENQLIYLPDSIGGLI 299

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            ++ L    N++ +LP ++G L+N+   +   N L  +P EIG  +++  L+L+ N  L 
Sbjct: 300 SVEELDCSFNEIETLPSSVGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHSNK-LE 358

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIP 558
            +P E+     L++++L +  L  +P
Sbjct: 359 FLPEEMGDMQKLKVINLSDNRLKNLP 384



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 162/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKILPKTMSRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEVVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP +IG L  ++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISGCESLQDLLLSSNSLQQLPESIGSLKKVTTLKIDENQLIYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   SN++  + D+  L+Q+PSEI
Sbjct: 308 FNE-IETLPSSVGQLSNIRTFAADHNFLTQLPSEI 341



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 161/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP +++ L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKILPKTMSRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   ++L  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTLIPGFIGTLKQLTYLDVSKNNIEVVEEGISGCESLQDLLLSSNSLQQLPESIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  ++  F  +   L+
Sbjct: 276 KKVTTLKIDENQLIYLPDSIGGLISVEELDCSFNEIETLPSSVGQLSNIRTFAADHNFLT 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +   +  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLP-SEIGNWKHVTVLFLHSNKLEFLPEEMGDMQKLKV--INLSDNRLKNLPF-TFTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|421116143|ref|ZP_15576532.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410012309|gb|EKO70411.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 356

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/312 (37%), Positives = 175/312 (56%), Gaps = 26/312 (8%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L++   K+  LP E+ +L+NL +LDLA+N  + LPKEIG    L  L+L +N+L N
Sbjct: 49  DVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKN 108

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L NL  L LS NRL + P+ + +  +L + N++   L++L   +   L S+  
Sbjct: 109 LPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEI-GQLQSLQK 167

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L +N+  A P                 N+I ++        +NL ++ + +N LT LP
Sbjct: 168 LNLDKNRLKALP-----------------NEIGQL--------QNLQELYLSNNQLTILP 202

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  L LG NQ++ L ++I  L NL++L   NN L  LP  IG L+KL+ L L
Sbjct: 203 EEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYL 262

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+L +LP EIG L+ LQ L L  NQL +LP+ IG L NL       N L  +P+EIG 
Sbjct: 263 SHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQ 322

Query: 517 LENLHTLYLNDN 528
           L+NL  L LN+N
Sbjct: 323 LQNLQWLKLNNN 334



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/303 (35%), Positives = 171/303 (56%), Gaps = 4/303 (1%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  L+L   +L  +P  +  L NL  L L+ N+ +++P+ + +  +L E
Sbjct: 39  DLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQE 98

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            N+    L +LP  +   L ++  + LS N+ T +P     Q  ++  +N ++NQ+  + 
Sbjct: 99  LNLWNNQLKNLPKEI-GQLQNLQTLILSVNRLTTFPQE-IGQLKNLQKLNLDYNQLTTLL 156

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + ++L K+N+  N L +LP ++G    L EL L  NQ++ L E+I  L NL+ L+
Sbjct: 157 QEI-GQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALI 215

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L +N L  LP  IG L+ LK L    N+L  LP EIG L++LQ L L  NQL +LP+ IG
Sbjct: 216 LGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIG 275

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L + +N L ++P+EIG L+NL T +++ N  L  +P E+    NLQ + L+N 
Sbjct: 276 QLENLQELYLNDNQLTTLPKEIGQLKNLQT-FISFNNQLTMLPQEIGQLQNLQWLKLNNN 334

Query: 553 PLS 555
            LS
Sbjct: 335 QLS 337



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 174/325 (53%), Gaps = 11/325 (3%)

Query: 145 YVTNLTCLGLAE----NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           ++  L+C   AE     +   L  +L N   +RVL+L   KL  LP  + +L +LK L L
Sbjct: 19  FLIYLSCEIQAEKIKPGTYRDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDL 78

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
             N+ KT+  +I  L NL  L++ +N+++ LP E+G+L+NL TL L+ N L   P+EIG 
Sbjct: 79  ANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQ 138

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  L+L +N+L  +   +G L +L +L L  NRL+++P  + +  +L E  +    L
Sbjct: 139 LKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQL 198

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
           + LP+  +  L ++  + L  N+ T  P   G       +YS+N   N++  +P  I  +
Sbjct: 199 TILPEE-IGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVN---NELTILPQEI-GQ 253

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
            + L  + +  N LT+LP ++G    L EL L  NQ++ L ++I  L NL+  +  NN L
Sbjct: 254 LQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQL 313

Query: 439 KKLPSSIGNLRKLKCLDLEENKLES 463
             LP  IG L+ L+ L L  N+L S
Sbjct: 314 TMLPQEIGQLQNLQWLKLNNNQLSS 338



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 138/241 (57%), Gaps = 5/241 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +LDL+ +    LP  + +L +L+EL L+ N+L +LP +IG + NL  L L+ N LT
Sbjct: 71  QNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLT 130

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           + P  +  L+ L+ L+L +N+L  L   + +L SL+ L L  NR+K +  +I  L NL  
Sbjct: 131 TFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQE 190

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++  LP E+G+LKNL  L L  N L  LPKEIG    L  L   +NEL  +P  
Sbjct: 191 LYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQE 250

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL-----LSSLTSIN 335
           +G L  L  L LS+N+L ++P+ + +  +L E  +    L++LP  +     L +  S N
Sbjct: 251 IGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFN 310

Query: 336 N 336
           N
Sbjct: 311 N 311



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 159/322 (49%), Gaps = 27/322 (8%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  +++L +L+ L L  N+  +LP +IG + NL  L L  N L +LP  
Sbjct: 53  LNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ L L  N+L   P  + +L +L+ L L +N++ T+  +I  L +L  L++  
Sbjct: 113 IGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDK 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+++ LP E+G+L+NL  L L++N L  LP+EIG    L  L L  N+L  +P  +G L 
Sbjct: 173 NRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L    N L  +P+ + +   L    +    L++LP   +  L ++  + L+ N+ T
Sbjct: 233 NLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKE-IGQLENLQELYLNDNQLT 291

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                             + KNL      +N LT LP ++G    L
Sbjct: 292 TLPKE-------------------------IGQLKNLQTFISFNNQLTMLPQEIGQLQNL 326

Query: 406 TELNLGTNQISKLSED-IQNLV 426
             L L  NQ+S   E+ IQ L+
Sbjct: 327 QWLKLNNNQLSSQEEERIQKLL 348



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 119/212 (56%), Gaps = 5/212 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + +T L   + +L  L++L L  N+L +LP++IG + NL  L L+ N LT
Sbjct: 140 KNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLT 199

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP+ +  L+ L+ L L  N+L  LP  + +L +LK+LY   N +  +  +I  L  L  
Sbjct: 200 ILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQY 259

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+L+NL  L L  N L  LPKEIG    L T    +N+L  +P  
Sbjct: 260 LYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQE 319

Query: 281 LGNLINLTRLRLSYNRL-----ESVPETLSKC 307
           +G L NL  L+L+ N+L     E + + L KC
Sbjct: 320 IGQLQNLQWLKLNNNQLSSQEEERIQKLLPKC 351



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 123/222 (55%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L LS + +T  P  + +L +L++L L  N+L +L  +IG + +L  L L +N L 
Sbjct: 117 QNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLK 176

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L L +N+L  LP  + +L +L+ L L  N++  +  +I  L NL +
Sbjct: 177 ALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKL 236

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L   +N++  LP E+G+L+ L  L L+HN L  LPKEIG    L  L L  N+L  +P  
Sbjct: 237 LYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKE 296

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           +G L NL       N+L  +P+ + +  +L    +    LSS
Sbjct: 297 IGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLSS 338



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 88/144 (61%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L++ ++N +++ VL LS+  L  LP  I  L+ LK LDL  N+ ++LP EIG L+ LQ L
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQEL 99

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L +NQL +LP+ IG L NL  L +  N L + P+EIG L+NL  L L+ N  L  +  E
Sbjct: 100 NLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQ-LTTLLQE 158

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    +LQ ++LD   L  +P+EI
Sbjct: 159 IGQLQSLQKLNLDKNRLKALPNEI 182



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N   ++ L+L   KL +LP EI  L+ L+ L L +NQ  +LP+ IG L NL 
Sbjct: 38  RDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQ 97

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L++  N L+++P+EIG L+NL TL L+ N  L   P E+    NLQ ++LD   L+ + 
Sbjct: 98  ELNLWNNQLKNLPKEIGQLQNLQTLILSVNR-LTTFPQEIGQLKNLQKLNLDYNQLTTLL 156

Query: 559 SEI 561
            EI
Sbjct: 157 QEI 159


>gi|391331045|ref|XP_003739961.1| PREDICTED: protein LAP2-like [Metaseiulus occidentalis]
          Length = 544

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 197/417 (47%), Gaps = 31/417 (7%)

Query: 95  FLRC-----KEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTN 148
           F RC     + E+I  LD S  ++  +P  +      L+EL L  N+L  LP Q+ Y   
Sbjct: 3   FGRCPCFKGETEDIQALDYSHCTLDEVPNEIFNYERTLQELCLDANQLGELPRQLFYCHA 62

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L   +N +  LP ++++L QL  LDL  N ++E+P  +     L  +    N I  +
Sbjct: 63  LRRLTFQDNDVQHLPAAISSLTQLTHLDLSRNNISEIPESIRGCKLLSSVDASVNPISKL 122

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
                 L +L  L + D  +  LP  LG L  L  L+L  NHL+ LPK +   T LV LD
Sbjct: 123 PESFTQLVSLEELYLNDTLLEFLPANLGRLSKLRILELRENHLKALPKSMARLTQLVRLD 182

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
           +  N+ V++P+++G+L++LT L    NRL  +P  L     L   +     +S + D   
Sbjct: 183 IGQNDFVDMPEVVGSLVSLTELWCDSNRLSYLPGFLGNLQQLRYLDASNNRISCIEDNAF 242

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
            +LT++ ++T+S N+ T +P                             +   L+ +   
Sbjct: 243 KNLTNLVDLTVSSNRLTRFPE-------------------------TIGKLTKLTTLRAD 277

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
           DN L  LP  LG    L EL    N +  L   I  L  L +L++ +N L +LP+ IG+ 
Sbjct: 278 DNQLLGLPDSLGYCSLLEELIANGNHMEYLPGTIGLLRQLSLLMVDSNWLDELPAEIGSC 337

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
            +LK L   +NKL  LP+EIG L  L+ L + +N+L  LP  +  L  L  L + EN
Sbjct: 338 NELKILSARDNKLVDLPDEIGHLSNLKVLSVSANRLRYLPATLTRLKQLDALWLSEN 394



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 185/382 (48%), Gaps = 24/382 (6%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + ++ LD  H  L+E+P  ++    +L+ L L  N++  +   + Y   L  L+ +DN +
Sbjct: 14  EDIQALDYSHCTLDEVPNEIFNYERTLQELCLDANQLGELPRQLFYCHALRRLTFQDNDV 73

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LP  +  L  L  LDL+ N++ E+P+ I  C +L ++D   N +  +P+    L++L 
Sbjct: 74  QHLPAAISSLTQLTHLDLSRNNISEIPESIRGCKLLSSVDASVNPISKLPESFTQLVSLE 133

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   LE +P  L +   L    +    L +LP  + + LT +  + + +N F   P
Sbjct: 134 ELYLNDTLLEFLPANLGRLSKLRILELRENHLKALPKSM-ARLTQLVRLDIGQNDFVDMP 192

Query: 349 S--GGPTQFTSVYS--------------------INFEHNQIDKIPYGIFSRAKNLSKVN 386
              G     T ++                     ++  +N+I  I    F    NL  + 
Sbjct: 193 EVVGSLVSLTELWCDSNRLSYLPGFLGNLQQLRYLDASNNRISCIEDNAFKNLTNLVDLT 252

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           +  N LT  P  +G    LT L    NQ+  L + +     LE L+ + N ++ LP +IG
Sbjct: 253 VSSNRLTRFPETIGKLTKLTTLRADDNQLLGLPDSLGYCSLLEELIANGNHMEYLPGTIG 312

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            LR+L  L ++ N L+ LP EIG   EL+ L  + N+LV LP  IGHL+NL  LSV  N 
Sbjct: 313 LLRQLSLLMVDSNWLDELPAEIGSCNELKILSARDNKLVDLPDEIGHLSNLKVLSVSANR 372

Query: 507 LQSIPEEIGTLENLHTLYLNDN 528
           L+ +P  +  L+ L  L+L++N
Sbjct: 373 LRYLPATLTRLKQLDALWLSEN 394



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 172/375 (45%), Gaps = 52/375 (13%)

Query: 236 GELKNLVTLDLAHNHLEELPKEIGN------------------------CTMLVTLDLQH 271
           GE +++  LD +H  L+E+P EI N                        C  L  L  Q 
Sbjct: 11  GETEDIQALDYSHCTLDEVPNEIFNYERTLQELCLDANQLGELPRQLFYCHALRRLTFQD 70

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           N++ ++P  + +L  LT L LS N +  +PE++  C  L+  +     +S LP+   + L
Sbjct: 71  NDVQHLPAAISSLTQLTHLDLSRNNISEIPESIRGCKLLSSVDASVNPISKLPES-FTQL 129

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
            S+  + L+       P+    + + +  +    N +  +P  + +R   L ++++  N 
Sbjct: 130 VSLEELYLNDTLLEFLPA-NLGRLSKLRILELRENHLKALPKSM-ARLTQLVRLDIGQND 187

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLS----------------------ED--IQNLVN 427
              +P  +G+ V LTEL   +N++S L                       ED   +NL N
Sbjct: 188 FVDMPEVVGSLVSLTELWCDSNRLSYLPGFLGNLQQLRYLDASNNRISCIEDNAFKNLTN 247

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           L  L +S+N L + P +IG L KL  L  ++N+L  LP+ +G+   L+ LI   N +  L
Sbjct: 248 LVDLTVSSNRLTRFPETIGKLTKLTTLRADDNQLLGLPDSLGYCSLLEELIANGNHMEYL 307

Query: 488 PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIM 547
           P  IG L  LS L V  N L  +P EIG+   L  L   DN  L ++P E+   SNL+++
Sbjct: 308 PGTIGLLRQLSLLMVDSNWLDELPAEIGSCNELKILSARDNK-LVDLPDEIGHLSNLKVL 366

Query: 548 SLDNCPLSQIPSEIV 562
           S+    L  +P+ + 
Sbjct: 367 SVSANRLRYLPATLT 381



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 23/153 (15%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHL-----------------------EELYLYGNKLAS 138
           N+++L +S + +T  P ++ KLT L                       EEL   GN +  
Sbjct: 247 NLVDLTVSSNRLTRFPETIGKLTKLTTLRADDNQLLGLPDSLGYCSLLEELIANGNHMEY 306

Query: 139 LPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL 198
           LP  IG +  L+ L +  N L  LP  + +  +L++L  R NKL +LP  +  L++LK+L
Sbjct: 307 LPGTIGLLRQLSLLMVDSNWLDELPAEIGSCNELKILSARDNKLVDLPDEIGHLSNLKVL 366

Query: 199 YLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
            +  NR++ +   +  L  L  L + +N+ + L
Sbjct: 367 SVSANRLRYLPATLTRLKQLDALWLSENQTKPL 399


>gi|358253495|dbj|GAA53284.1| leucine-rich repeat and death domain-containing protein LOC401387
           [Clonorchis sinensis]
          Length = 826

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 141/445 (31%), Positives = 217/445 (48%), Gaps = 29/445 (6%)

Query: 120 VEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRH 179
           +E L  L+ L +    L  LP  +  + NL  L L+ N LT LP+ +  L  L+V+DL  
Sbjct: 1   MEFLRFLQILIINACSLKVLPESVISLQNLALLDLSGNKLTILPEEVGKLTSLKVMDLSC 60

Query: 180 NKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELK 239
           N L+E+P  VY L +L+ L L  N +  + P I+ L  L +L    N++R LP E+  L 
Sbjct: 61  NILSEIPEAVYDLLNLQSLDLSENNLSILSPSIRKLKGLQVLLCASNQLRYLPEEITCLS 120

Query: 240 NLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLES 299
           NL+ L L +N L  LP+   N   L+ L L  N+  +IP  L N ++L  L +  N++  
Sbjct: 121 NLLVLRLMNNKLCYLPRAFSNLKSLLILQLDSNDFDHIPSQLFNCVSLVELSMQDNKIMG 180

Query: 300 V-PETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
           V P+ L++ V+L   N+     +SL D  LS L  +  + L+ N                
Sbjct: 181 VLPKELAQLVNLKALNIAYNYFTSLTDA-LSKLEKLEYLNLNGNSM------------RT 227

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
           + I+ +  Q              L +++     ++S+P D+G    L  LNL  N+I   
Sbjct: 228 FDISLKALQ-------------QLQEISFAGCGISSVPDDIGCLKNLMILNLSGNRIKGF 274

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI-GFLKELQRL 477
             D  NL  L  + LS N L  +P  I +LR L  L+L  N+L  LP E  G L  L++L
Sbjct: 275 PTDNTNLSKLSAVSLSKNALSVVPKWICDLRNLVVLELPYNRLRDLPVEFEGVLPTLRQL 334

Query: 478 ILQSNQLVSLPRAIGHLTN-LSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
            L  N   +LP  I    N LSYL +  N L  +P+EI TL +L  L +++   L   P 
Sbjct: 335 DLSFNLFYTLPSCILRQNNRLSYLCLDSNPLIYLPDEISTLHDLTHLSISNCNQLRRFPE 394

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEI 561
            L  C++L+++   +C L  +P+ +
Sbjct: 395 GLGRCTSLRMIRASHCSLEGLPTNL 419



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 140/459 (30%), Positives = 220/459 (47%), Gaps = 38/459 (8%)

Query: 94  EFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLG 153
           EFLR  +  I+N      S+  LP SV  L +L  L L GNKL  LP ++G +T+L  + 
Sbjct: 2   EFLRFLQILIIN----ACSLKVLPESVISLQNLALLDLSGNKLTILPEEVGKLTSLKVMD 57

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L+ N L+ +P+++ +L  L+ LDL  N L+ L   + KL  L++L    N+++ +  +I 
Sbjct: 58  LSCNILSEIPEAVYDLLNLQSLDLSENNLSILSPSIRKLKGLQVLLCASNQLRYLPEEIT 117

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            LSNL +L + +NK+  LP     LK+L+ L L  N  + +P ++ NC  LV L +Q N+
Sbjct: 118 CLSNLLVLRLMNNKLCYLPRAFSNLKSLLILQLDSNDFDHIPSQLFNCVSLVELSMQDNK 177

Query: 274 LVNI-PDMLGNLINLTRLRLSYNRLESVPETLSK-----------------------CVH 309
           ++ + P  L  L+NL  L ++YN   S+ + LSK                          
Sbjct: 178 IMGVLPKELAQLVNLKALNIAYNYFTSLTDALSKLEKLEYLNLNGNSMRTFDISLKALQQ 237

Query: 310 LNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQ 367
           L E +  GC +SS+PD  G L +L  +N   LS N+   +P+   T  + + +++   N 
Sbjct: 238 LQEISFAGCGISSVPDDIGCLKNLMILN---LSGNRIKGFPTDN-TNLSKLSAVSLSKNA 293

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL-GTWVGLTELNLGTNQISKLSEDIQNLV 426
           +  +P  I    +NL  + +  N L  LP++  G    L +L+L  N    L   I    
Sbjct: 294 LSVVPKWI-CDLRNLVVLELPYNRLRDLPVEFEGVLPTLRQLDLSFNLFYTLPSCILRQN 352

Query: 427 N-LEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE-NKLESLPNEIGFLKELQRLILQSNQL 484
           N L  L L +N L  LP  I  L  L  L +   N+L   P  +G    L+ +      L
Sbjct: 353 NRLSYLCLDSNPLIYLPDEISTLHDLTHLSISNCNQLRRFPEGLGRCTSLRMIRASHCSL 412

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
             LP  + HLT+L YL +  N  +  P  +  +  L  L
Sbjct: 413 EGLPTNLTHLTSLKYLDLSHNQFEHFPIVVCFMPRLRVL 451



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 207/484 (42%), Gaps = 63/484 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNK-LASLPSQIGYVTNLTCLGLAENSL 159
           +++L L L  +   H+P  +     L EL +  NK +  LP ++  + NL  L +A N  
Sbjct: 143 KSLLILQLDSNDFDHIPSQLFNCVSLVELSMQDNKIMGVLPKELAQLVNLKALNIAYNYF 202

Query: 160 TSLPDSLANLQQLRVLDLRHNKL-----------------------NELPMVVYKLTSLK 196
           TSL D+L+ L++L  L+L  N +                       + +P  +  L +L 
Sbjct: 203 TSLTDALSKLEKLEYLNLNGNSMRTFDISLKALQQLQEISFAGCGISSVPDDIGCLKNLM 262

Query: 197 ILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPK 256
           IL L  NRIK    D   LS LS +S+  N +  +P  + +L+NLV L+L +N L +LP 
Sbjct: 263 ILNLSGNRIKGFPTDNTNLSKLSAVSLSKNALSVVPKWICDLRNLVVLELPYNRLRDLPV 322

Query: 257 EI-GNCTMLVTLDLQHN------------------------ELVNIPDMLGNLINLTRLR 291
           E  G    L  LDL  N                         L+ +PD +  L +LT L 
Sbjct: 323 EFEGVLPTLRQLDLSFNLFYTLPSCILRQNNRLSYLCLDSNPLIYLPDEISTLHDLTHLS 382

Query: 292 LS-YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP-- 348
           +S  N+L   PE L +C  L       C+L  LP  L + LTS+  + LS N+F  +P  
Sbjct: 383 ISNCNQLRRFPEGLGRCTSLRMIRASHCSLEGLPTNL-THLTSLKYLDLSHNQFEHFPIV 441

Query: 349 -SGGPTQFTSVYSINFEHNQID--KIPYGIFSRAKNLSKVNMKDNLL--TSLPLDLGTWV 403
               P     +Y    E   +D  + P G FSR+  L      D+    T  P +    +
Sbjct: 442 VCFMPRLRVLLYDQQ-EGRPLDSSESPRGWFSRSNLLYPEGTLDDGSGGTKSPGEDEKIM 500

Query: 404 GLTELNLGTNQIS---KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
            LT     ++Q +   KL   I  L  L  + L  N L  LP    ++  LK  +L  N+
Sbjct: 501 ALTLEEALSHQYTSGMKLPAVIGKLSQLVHISLQGNGLFVLPDVFHHM-NLKRANLSNNR 559

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L  LP      K +  L LQ NQ+  L      +  L  L++  N L S P +  + + +
Sbjct: 560 LRFLPPRFHKCKYITHLYLQDNQIEKLDETFQQMKTLQVLTLAGNPLISPPIDACSGKRV 619

Query: 521 HTLY 524
             +Y
Sbjct: 620 FPVY 623



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 134/529 (25%), Positives = 213/529 (40%), Gaps = 44/529 (8%)

Query: 77  PTTKKKEPIQADLNIEKEFLRCKEE-----NILNLDLSKSSITHLPPSVEKLTHLEELYL 131
           P+ +K + +Q  L    +     EE     N+L L L  + + +LP +   L  L  L L
Sbjct: 91  PSIRKLKGLQVLLCASNQLRYLPEEITCLSNLLVLRLMNNKLCYLPRAFSNLKSLLILQL 150

Query: 132 YGNKLASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLRVLDLRHNKLNELPMVVY 190
             N    +PSQ+    +L  L + +N +   LP  LA L  L+ L++ +N    L   + 
Sbjct: 151 DSNDFDHIPSQLFNCVSLVELSMQDNKIMGVLPKELAQLVNLKALNIAYNYFTSLTDALS 210

Query: 191 KLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
           KL  L+ L L  N ++T    ++ L  L  +S     I  +P ++G LKNL+ L+L+ N 
Sbjct: 211 KLEKLEYLNLNGNSMRTFDISLKALQQLQEISFAGCGISSVPDDIGCLKNLMILNLSGNR 270

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV-H 309
           ++  P +  N + L  + L  N L  +P  + +L NL  L L YNRL  +P      +  
Sbjct: 271 IKGFPTDNTNLSKLSAVSLSKNALSVVPKWICDLRNLVVLELPYNRLRDLPVEFEGVLPT 330

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
           L + ++      +LP  +L     ++ + L  N     P    T     +      NQ+ 
Sbjct: 331 LRQLDLSFNLFYTLPSCILRQNNRLSYLCLDSNPLIYLPDEISTLHDLTHLSISNCNQLR 390

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
           + P G+  R  +L  +      L  LP +L     L  L+L  NQ       +  +  L 
Sbjct: 391 RFPEGL-GRCTSLRMIRASHCSLEGLPTNLTHLTSLKYLDLSHNQFEHFPIVVCFMPRLR 449

Query: 430 VLVLSNNLLKKLPSS----------------------------IGNLRKLKCLDLEE--- 458
           VL+      + L SS                             G   K+  L LEE   
Sbjct: 450 VLLYDQQEGRPLDSSESPRGWFSRSNLLYPEGTLDDGSGGTKSPGEDEKIMALTLEEALS 509

Query: 459 ---NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
                   LP  IG L +L  + LQ N L  LP    H+ NL   ++  N L+ +P    
Sbjct: 510 HQYTSGMKLPAVIGKLSQLVHISLQGNGLFVLPDVFHHM-NLKRANLSNNRLRFLPPRFH 568

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVG 564
             + +  LYL DN  +  +         LQ+++L   PL   P +   G
Sbjct: 569 KCKYITHLYLQDNQ-IEKLDETFQQMKTLQVLTLAGNPLISPPIDACSG 616


>gi|428182313|gb|EKX51174.1| hypothetical protein GUITHDRAFT_66212 [Guillardia theta CCMP2712]
          Length = 556

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 157/514 (30%), Positives = 246/514 (47%), Gaps = 59/514 (11%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           I  L LS + ++ LP  +  LT L+ L L  N + SLP QIG +T++  L L+ N L SL
Sbjct: 14  ITRLSLSYNRVSTLPAGIGSLTQLQSLDLSHNLITSLPPQIGQLTSMKQLDLSFNMLDSL 73

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P  +++L     L L HN+L+ LP  + +L+SL    L    ++ V PD+   S++ ++ 
Sbjct: 74  PKEMSSLPDWSKLLLSHNRLSTLPPSISRLSSLTHADLSDFGLQAVPPDLLENSSIRVVL 133

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N+I  LPP +    +LV L L  N +  LP  IG CT L +LDL+HN L  +P  +G
Sbjct: 134 LGHNQISSLPPSVQTWTSLVELCLQGNRINRLPASIGFCTALTSLDLRHNRLRRLPPEMG 193

Query: 283 -----------------------NLINLTR---LRLSYNRLESVPETL------------ 304
                                  +L  LTR   LR+ +N LE +P  L            
Sbjct: 194 RMRALNKLLLLGQHHNSIKDLPTDLDRLTRLRSLRVDHNILEMLPPGLRFLTSLTELLAN 253

Query: 305 -----------SKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GG 351
                        CVHL   N+    L +LP   + + + +  +T+ +NK    P   G 
Sbjct: 254 DNMLEEVCPEIGACVHLTRLNLHANKLVTLPHT-IGNCSLLTQLTIHQNKI-KLPEEIGH 311

Query: 352 PTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG-TWVGLTELNL 410
            T    ++SI    N++ +IP  + +  + L  + +  N LT LP  L   +  L  L++
Sbjct: 312 FTLLDELFSIC--DNELVEIPESVGNLVR-LRSLRLSGNNLTMLPDSLSELFTDLVLLSV 368

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N++  L++ I  L NL VL L +NLL+ LP S+   R L  L L  N+ +S P  I  
Sbjct: 369 AHNKVESLTDRISVLSNLTVLELEDNLLQHLPQSLEGNRSLVKLTLNRNQFQSFPEVIFD 428

Query: 471 LKELQRLILQSNQLVSLPRAIGHL-TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
           L  LQ L L  NQ+  +P A+    T L  L++  N + ++P  IG + NL  L L  N 
Sbjct: 429 LSGLQILNLALNQIELVPEALCEANTALKLLALQHNQIHALPSNIGLMANLILLDLTQNH 488

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVV 563
            + ++P  ++ C  L+ + L   PL   P ++++
Sbjct: 489 II-SLPSSISACQRLRALFLSGNPLPSFPRDVLL 521



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 140/439 (31%), Positives = 219/439 (49%), Gaps = 32/439 (7%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  + I+ LPPSV+  T L EL L GN++  LP+ IG+ T LT L               
Sbjct: 134 LGHNQISSLPPSVQTWTSLVELCLQGNRINRLPASIGFCTALTSL--------------- 178

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL---RFNRIKTVHPDIQYLSNLSMLSMR 224
                   DLRHN+L  LP  + ++ +L  L L     N IK +  D+  L+ L  L + 
Sbjct: 179 --------DLRHNRLRRLPPEMGRMRALNKLLLLGQHHNSIKDLPTDLDRLTRLRSLRVD 230

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
            N +  LPP L  L +L  L    N LEE+  EIG C  L  L+L  N+LV +P  +GN 
Sbjct: 231 HNILEMLPPGLRFLTSLTELLANDNMLEEVCPEIGACVHLTRLNLHANKLVTLPHTIGNC 290

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNE-FNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
             LT+L +  N+++ +PE +     L+E F++    L  +P+  + +L  + ++ LS N 
Sbjct: 291 SLLTQLTIHQNKIK-LPEEIGHFTLLDELFSICDNELVEIPES-VGNLVRLRSLRLSGNN 348

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
            T  P      FT +  ++  HN+++ +   I S   NL+ + ++DNLL  LP  L    
Sbjct: 349 LTMLPDSLSELFTDLVLLSVAHNKVESLTDRI-SVLSNLTVLELEDNLLQHLPQSLEGNR 407

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL-RKLKCLDLEENKLE 462
            L +L L  NQ     E I +L  L++L L+ N ++ +P ++      LK L L+ N++ 
Sbjct: 408 SLVKLTLNRNQFQSFPEVIFDLSGLQILNLALNQIELVPEALCEANTALKLLALQHNQIH 467

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL-H 521
           +LP+ IG +  L  L L  N ++SLP +I     L  L +  N L S P ++  L  L  
Sbjct: 468 ALPSNIGLMANLILLDLTQNHIISLPSSISACQRLRALFLSGNPLPSFPRDVLLLSRLQQ 527

Query: 522 TLYLNDNTCLNNIPFELAL 540
            L+L+  + L + P  +A+
Sbjct: 528 VLFLSSLSRLPDPPCAVAM 546


>gi|355749960|gb|EHH54298.1| Erbb2-interacting protein [Macaca fascicularis]
          Length = 1411

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  ++  
Sbjct: 268 LPETIGSLKNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  ++  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNVTVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 117/222 (52%), Gaps = 25/222 (11%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            + NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I
Sbjct: 53  LDANQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENI 111

Query: 423 QN-----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           +N                       L+NL  L L++  L+ LP++ G L KL+ L+L EN
Sbjct: 112 KNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELREN 171

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L+ LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ 
Sbjct: 172 QLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQ 231

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L ++ N  +  +   ++ C NLQ + L +  L Q+P  I
Sbjct: 232 LTYLDVSKNN-IEMVEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|443692532|gb|ELT94125.1| hypothetical protein CAPTEDRAFT_139593, partial [Capitella teleta]
          Length = 549

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 223/430 (51%), Gaps = 13/430 (3%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD+S +++  LP ++ K + L E+    N+L ++P+++G   +L  + L+ N + SL  +
Sbjct: 120 LDISSNTLRSLPATIHKASGLTEIKAANNRLKTVPAKLGTAPSLVSIDLSNNIIKSLKKN 179

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L     L++ HNKL +LP V  K   +  + + +N+++ +   I+ L  L+ L +  
Sbjct: 180 IYKLP--LTLNVSHNKLKDLPAVSVKNPCIHSMDVSYNQLEQLPNGIENLLCLTSLDVSH 237

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT-LDLQHNELVNIPDMLGNL 284
           N++ ELPP+LG +K +  LD++HN L+ L  E+ N    +T L + HN L  +PD     
Sbjct: 238 NELTELPPQLGLVKYMTHLDISHNKLKFLNPELCNLQFAMTQLYISHNSLETLPDEFCMF 297

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             LT L LS+N +  +P        L + N+      ++    LS L +  ++ LS N  
Sbjct: 298 KKLTTLDLSHNEINLLPPKFEDMKTLKKLNLSHNKFRNV--SALSGLRNCEDLDLSSNAI 355

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
              PS    +  ++ +++   N I  IP  I  R + L  + M +N +T+LP  LG    
Sbjct: 356 DLLPSDI-DKMKALVNLDISDNAIKTIPDSI-GRIRTLKMIKMANNSVTTLPDTLGDDQI 413

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL------KKLPSSIGNLRKLKCLDLEE 458
           +  ++   N +  L  D++ L N+E L+LS N L      ++ P++IGNL+ L+ LDL  
Sbjct: 414 IIYIDATNNGLEALPADMRKLRNMETLLLSQNQLSAFLQLEEFPAAIGNLKMLQNLDLSN 473

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N L+ L ++   LK L RLI+++N L + P  I  L  L YL    N +    +E+  L 
Sbjct: 474 NLLKKLSDKFFKLKNLARLIIKNNTLQAFPDDISTLKKLKYLDASNNQITEFTKEMTQLS 533

Query: 519 NLHTLYLNDN 528
            L  + L++N
Sbjct: 534 ELEFIDLSEN 543



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 131/525 (24%), Positives = 254/525 (48%), Gaps = 43/525 (8%)

Query: 74  KPKPTTKKKEPIQA-DLNIEKEFLRCKE-ENILNLDLSKSSITHLPPSVEKLTHLEE--- 128
           KP P T     I++   +I +  L  ++ +  + L+ S +S+ +LP  + +   ++    
Sbjct: 13  KPPPPTGPGSKIKSLPADIRRHILPQQDGQRGVQLNWSTTSVKNLPKEIYQNEEIQGFAR 72

Query: 129 -LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPM 187
            L    N+L  +P  +  +  L  + L  N+++ LP S++ L+ L  LD+  N L  LP 
Sbjct: 73  ILEAPNNRLKKVPGAVSALKELENIDLKNNTISKLPGSISRLKALNYLDISSNTLRSLPA 132

Query: 188 VVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL-----------G 236
            ++K + L  +    NR+KTV   +    +L  + + +N I+ L   +            
Sbjct: 133 TIHKASGLTEIKAANNRLKTVPAKLGTAPSLVSIDLSNNIIKSLKKNIYKLPLTLNVSHN 192

Query: 237 ELKNLV----------TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           +LK+L           ++D+++N LE+LP  I N   L +LD+ HNEL  +P  LG +  
Sbjct: 193 KLKDLPAVSVKNPCIHSMDVSYNQLEQLPNGIENLLCLTSLDVSHNELTELPPQLGLVKY 252

Query: 287 LTRLRLSYNRLESV-PETLSKCVHLNEFNVEGCALSSLPDG--LLSSLTSINNITLSRNK 343
           +T L +S+N+L+ + PE  +    + +  +   +L +LPD   +   LT+++   LS N+
Sbjct: 253 MTHLDISHNKLKFLNPELCNLQFAMTQLYISHNSLETLPDEFCMFKKLTTLD---LSHNE 309

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
               P        ++  +N  HN+   +     S  +N   +++  N +  LP D+    
Sbjct: 310 INLLPPKF-EDMKTLKKLNLSHNKFRNV--SALSGLRNCEDLDLSSNAIDLLPSDIDKMK 366

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            L  L++  N I  + + I  +  L+++ ++NN +  LP ++G+ + +  +D   N LE+
Sbjct: 367 ALVNLDISDNAIKTIPDSIGRIRTLKMIKMANNSVTTLPDTLGDDQIIIYIDATNNGLEA 426

Query: 464 LPNEIGFLKELQRLILQSNQLVS------LPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
           LP ++  L+ ++ L+L  NQL +       P AIG+L  L  L +  N L+ + ++   L
Sbjct: 427 LPADMRKLRNMETLLLSQNQLSAFLQLEEFPAAIGNLKMLQNLDLSNNLLKKLSDKFFKL 486

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           +NL  L + +NT L   P +++    L+ +   N  +++   E+ 
Sbjct: 487 KNLARLIIKNNT-LQAFPDDISTLKKLKYLDASNNQITEFTKEMT 530



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 110/207 (53%), Gaps = 6/207 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
            N  +LDLS ++I  LP  ++K+  L  L +  N + ++P  IG +  L  + +A NS+T
Sbjct: 343 RNCEDLDLSSNAIDLLPSDIDKMKALVNLDISDNAIKTIPDSIGRIRTLKMIKMANNSVT 402

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY---LSN 217
           +LPD+L + Q +  +D  +N L  LP  + KL +++ L L  N++       ++   + N
Sbjct: 403 TLPDTLGDDQIIIYIDATNNGLEALPADMRKLRNMETLLLSQNQLSAFLQLEEFPAAIGN 462

Query: 218 LSM---LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L M   L + +N +++L  +  +LKNL  L + +N L+  P +I     L  LD  +N++
Sbjct: 463 LKMLQNLDLSNNLLKKLSDKFFKLKNLARLIIKNNTLQAFPDDISTLKKLKYLDASNNQI 522

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVP 301
                 +  L  L  + LS N+L+++P
Sbjct: 523 TEFTKEMTQLSELEFIDLSENQLQTLP 549


>gi|403267429|ref|XP_003925835.1| PREDICTED: protein LAP2 isoform 1 [Saimiri boliviensis boliviensis]
          Length = 1371

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 210/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEEAVTTLDYSHCSLEQVPKEIFNFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGELTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISACENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGELTNLRTFAADHNYLQQLPPEI 341



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 159/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGLL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGELTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|403267431|ref|XP_003925836.1| PREDICTED: protein LAP2 isoform 2 [Saimiri boliviensis boliviensis]
          Length = 1419

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 210/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEEAVTTLDYSHCSLEQVPKEIFNFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGELTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISACENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGELTNLRTFAADHNYLQQLPPEI 341



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 159/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG  
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGLL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGELTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|398341375|ref|ZP_10526078.1| hypothetical protein LkirsB1_19650 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 374

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/334 (36%), Positives = 181/334 (54%), Gaps = 27/334 (8%)

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           +++L L  NR KT+  +I  L NL  L++  N++  LP E+G+LKNL  L+L  N    L
Sbjct: 46  VRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTIL 105

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           PKE+     L  L L  N L  +P+ +G L NL  L+L++N+ +++P+ + +  +L   N
Sbjct: 106 PKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLN 165

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +    L++LP+ +   L ++ ++ L  N+ T  P+              E  Q+ K    
Sbjct: 166 LGNNQLTALPNEI-GQLQNLKSLDLGSNRLTTLPN--------------EIGQLQK---- 206

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
                  L  + +  N LT+LP ++G    L +L LG+NQ++ L  +I  L NL+ L L 
Sbjct: 207 -------LQDLYLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLR 259

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
           +N L  L   I  L+ LK LDL  N+L + P EI  LK LQ L L SNQL +LP  I  L
Sbjct: 260 SNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQL 319

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            NL  L +G N L ++PE IG L+NL  LYLN+N
Sbjct: 320 KNLQVLDLGSNQLTTLPEGIGQLQNLQ-LYLNNN 352



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/335 (34%), Positives = 176/335 (52%), Gaps = 27/335 (8%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L  N+  +LP +IG + NL  L L +N LT LP  +  L+ LR L+L  N+   LP  
Sbjct: 49  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKE 108

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           V KL +LK L L  NR+ T+  +I  L NL +L +  N+ + +P E+G+LKNL TL+L +
Sbjct: 109 VEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGN 168

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L  LP EIG    L +LDL  N L  +P+ +G L  L  L LS NRL ++P  + +  
Sbjct: 169 NQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQ 228

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L +  +    L+ LP+  +  L ++  + L  N+ T                       
Sbjct: 229 NLQDLYLGSNQLTILPNE-IGQLKNLQTLYLRSNRLTTLSKD------------------ 269

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
                    + +NL  +++ +N LT+ P ++     L  L+LG+NQ++ L E+I+ L NL
Sbjct: 270 -------IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNL 322

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           +VL L +N L  LP  IG L+ L+ L L  N+L S
Sbjct: 323 QVLDLGSNQLTTLPEGIGQLQNLQ-LYLNNNQLSS 356



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/318 (35%), Positives = 167/318 (52%), Gaps = 27/318 (8%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L+L+ N  + LPKEIG    L  L+L  N+L  +P  +G L NL +L L  N+   +P+ 
Sbjct: 49  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKE 108

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           + K  +L E ++    L++LP+ +                          Q  ++  +  
Sbjct: 109 VEKLENLKELSLGSNRLTTLPNEI-------------------------GQLKNLRVLKL 143

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
            HNQ   IP  I  + KNL  +N+ +N LT+LP ++G    L  L+LG+N+++ L  +I 
Sbjct: 144 THNQFKTIPKEI-GQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIG 202

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
            L  L+ L LS N L  LP+ IG L+ L+ L L  N+L  LPNEIG LK LQ L L+SN+
Sbjct: 203 QLQKLQDLYLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNR 262

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
           L +L + I  L NL  L +  N L + P+EI  L+NL  L L  N  L  +P E+    N
Sbjct: 263 LTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQ-LTTLPEEIEQLKN 321

Query: 544 LQIMSLDNCPLSQIPSEI 561
           LQ++ L +  L+ +P  I
Sbjct: 322 LQVLDLGSNQLTTLPEGI 339



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 173/333 (51%), Gaps = 27/333 (8%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS +    LP  + KL +L+EL L  N+L  LP +IG + NL  L L +N  T LP  
Sbjct: 49  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKE 108

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L  N+L  LP  + +L +L++L L  N+ KT+  +I  L NL  L++ +
Sbjct: 109 VEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGN 168

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L+NL +LDL  N L  LP EIG    L  L L  N L  +P+ +G L 
Sbjct: 169 NQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQ 228

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L  +P  + +  +L    +    L++L                      
Sbjct: 229 NLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTL---------------------- 266

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
              S    Q  ++ S++  +NQ+   P  I  + KNL  +++  N LT+LP ++     L
Sbjct: 267 ---SKDIEQLQNLKSLDLWNNQLTTFPKEI-EQLKNLQVLDLGSNQLTTLPEEIEQLKNL 322

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
             L+LG+NQ++ L E I  L NL+ L L+NN L
Sbjct: 323 QVLDLGSNQLTTLPEGIGQLQNLQ-LYLNNNQL 354



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/229 (37%), Positives = 130/229 (56%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  L L  + +T LP  + +L +L  L L  N+  ++P +IG + NL  L L  N 
Sbjct: 111 KLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQ 170

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP+ +  LQ L+ LDL  N+L  LP  + +L  L+ LYL  NR+ T+  +I  L NL
Sbjct: 171 LTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNL 230

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L +  N++  LP E+G+LKNL TL L  N L  L K+I     L +LDL +N+L   P
Sbjct: 231 QDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFP 290

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
             +  L NL  L L  N+L ++PE + +  +L   ++    L++LP+G+
Sbjct: 291 KEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTTLPEGI 339



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 2/260 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  +  T LP  VEKL +L+EL L  N+L +LP++IG + NL  L L  N   
Sbjct: 90  KNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFK 149

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++P  +  L+ L+ L+L +N+L  LP  + +L +LK L L  NR+ T+  +I  L  L  
Sbjct: 150 TIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQD 209

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+L+NL  L L  N L  LP EIG    L TL L+ N L  +   
Sbjct: 210 LYLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKD 269

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  N+L + P+ + +  +L   ++    L++LP+  +  L ++  + L 
Sbjct: 270 IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEE-IEQLKNLQVLDLG 328

Query: 341 RNKFTAYPSG-GPTQFTSVY 359
            N+ T  P G G  Q   +Y
Sbjct: 329 SNQLTTLPEGIGQLQNLQLY 348



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/222 (39%), Positives = 130/222 (58%), Gaps = 8/222 (3%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           I KE  + K  N+  L+L  + +T LP  + +L +L+ L L  N+L +LP++IG +  L 
Sbjct: 151 IPKEIGQLK--NLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQ 208

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L+ N LT+LP+ +  LQ L+ L L  N+L  LP  + +L +L+ LYLR NR+ T+  
Sbjct: 209 DLYLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSK 268

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           DI+ L NL  L + +N++   P E+ +LKNL  LDL  N L  LP+EI     L  LDL 
Sbjct: 269 DIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLG 328

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRL-----ESVPETLSKC 307
            N+L  +P+ +G L NL +L L+ N+L     E + + L KC
Sbjct: 329 SNQLTTLPEGIGQLQNL-QLYLNNNQLSSEEKERIRKLLPKC 369



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  +I N   ++ L+L  N+ ++LP EIG LK LQ L L  NQL  LP+ IG L NL 
Sbjct: 34  RDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 93

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L++ +N    +P+E+  LENL  L L  N  L  +P E+    NL+++ L +     IP
Sbjct: 94  KLNLHDNQFTILPKEVEKLENLKELSLGSNR-LTTLPNEIGQLKNLRVLKLTHNQFKTIP 152

Query: 559 SEI 561
            EI
Sbjct: 153 KEI 155


>gi|456888996|gb|EMF99923.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 347

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/324 (36%), Positives = 177/324 (54%), Gaps = 5/324 (1%)

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
           +   +Q  S + +L +   ++  LP E+G  +NL  L L  N L  +PKEIG    L TL
Sbjct: 9   LEKSLQNPSEVRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEIGKLRNLETL 68

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
            L  N L  IP+ +  L NL  L L  N+L ++P  + K  +L E N+ G  LS LP   
Sbjct: 69  ILAENRLKTIPNEIEQLQNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVLP--- 125

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
           ++ L ++  + L RN+FT  P    T+  ++  +N   N+I  +P  I S+  NL  +++
Sbjct: 126 IAQLQNLEILELFRNQFTTLPKE-ITELKNLQILNLFENKIKILPKEI-SQLSNLIWLDL 183

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
             N +  L LD   +  L  LNL  N++  LS DI  L +LE L L+ N  K LP  I  
Sbjct: 184 GKNKIERLSLDFKGFQNLKSLNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKILPEEILQ 243

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           L  L+ L+L  N+L SLP EIG L++L+ L ++ N+L +LP  IGHL NL  L + +N L
Sbjct: 244 LENLQVLELTGNQLTSLPEEIGKLEKLESLFVEGNRLTTLPNGIGHLRNLKILHLEQNRL 303

Query: 508 QSIPEEIGTLENLHTLYLNDNTCL 531
            ++PEE+  L+NL  LYL ++   
Sbjct: 304 TTLPEEMRALQNLKELYLQNSNSF 327



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/307 (34%), Positives = 167/307 (54%), Gaps = 9/307 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS   +  LP  +    +LE+L L+ N+L ++P +IG + NL  L LAEN L ++P+ 
Sbjct: 22  LDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEIGKLRNLETLILAENRLKTIPNE 81

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ LDL  NKL+ LP  + KL +LK L L  N++ +V P I  L NL +L +  
Sbjct: 82  IEQLQNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQL-SVLP-IAQLQNLEILELFR 139

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+   LP E+ ELKNL  L+L  N ++ LPKEI   + L+ LDL  N++  +        
Sbjct: 140 NQFTTLPKEITELKNLQILNLFENKIKILPKEISQLSNLIWLDLGKNKIERLSLDFKGFQ 199

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+LE +   +++   L   N+       LP+ +L  L ++  + L+ N+ T
Sbjct: 200 NLKSLNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKILPEEILQ-LENLQVLELTGNQLT 258

Query: 346 AYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
           + P   G   +  S++    E N++  +P GI    +NL  ++++ N LT+LP ++    
Sbjct: 259 SLPEEIGKLEKLESLF---VEGNRLTTLPNGI-GHLRNLKILHLEQNRLTTLPEEMRALQ 314

Query: 404 GLTELNL 410
            L EL L
Sbjct: 315 NLKELYL 321



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 133/227 (58%), Gaps = 2/227 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL ++ +++LP  + KL +L+EL L GN+L+ LP  I  + NL  L L  N  T
Sbjct: 86  QNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVLP--IAQLQNLEILELFRNQFT 143

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L++L+L  NK+  LP  + +L++L  L L  N+I+ +  D +   NL  
Sbjct: 144 TLPKEITELKNLQILNLFENKIKILPKEISQLSNLIWLDLGKNKIERLSLDFKGFQNLKS 203

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++ DNK+  L  ++ +LK+L  L+L +N  + LP+EI     L  L+L  N+L ++P+ 
Sbjct: 204 LNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEE 263

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
           +G L  L  L +  NRL ++P  +    +L   ++E   L++LP+ +
Sbjct: 264 IGKLEKLESLFVEGNRLTTLPNGIGHLRNLKILHLEQNRLTTLPEEM 310



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 127/227 (55%), Gaps = 4/227 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  L+LS + ++ LP  + +L +LE L L+ N+  +LP +I  + NL  L L EN 
Sbjct: 107 KLENLKELNLSGNQLSVLP--IAQLQNLEILELFRNQFTTLPKEITELKNLQILNLFENK 164

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           +  LP  ++ L  L  LDL  NK+  L +      +LK L L  N+++ +  DI  L +L
Sbjct: 165 IKILPKEISQLSNLIWLDLGKNKIERLSLDFKGFQNLKSLNLLDNKLEHLSADIAQLKSL 224

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++  N+ + LP E+ +L+NL  L+L  N L  LP+EIG    L +L ++ N L  +P
Sbjct: 225 EFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEEIGKLEKLESLFVEGNRLTTLP 284

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
           + +G+L NL  L L  NRL ++PE +    +L E  ++    +S P+
Sbjct: 285 NGIGHLRNLKILHLEQNRLTTLPEEMRALQNLKELYLQNS--NSFPE 329



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 126/242 (52%), Gaps = 6/242 (2%)

Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           L +LP+ +  +  ++  + L RN+ TA P     +  ++ ++    N++  IP  I  + 
Sbjct: 29  LETLPEEI-GTFQNLEKLILFRNRLTAIPKE-IGKLRNLETLILAENRLKTIPNEI-EQL 85

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           +NL  +++ +N L++LP  +G    L ELNL  NQ+S L   I  L NLE+L L  N   
Sbjct: 86  QNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVLP--IAQLQNLEILELFRNQFT 143

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
            LP  I  L+ L+ L+L ENK++ LP EI  L  L  L L  N++  L        NL  
Sbjct: 144 TLPKEITELKNLQILNLFENKIKILPKEISQLSNLIWLDLGKNKIERLSLDFKGFQNLKS 203

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPS 559
           L++ +N L+ +  +I  L++L  L LN N     +P E+    NLQ++ L    L+ +P 
Sbjct: 204 LNLLDNKLEHLSADIAQLKSLEFLNLNYNR-FKILPEEILQLENLQVLELTGNQLTSLPE 262

Query: 560 EI 561
           EI
Sbjct: 263 EI 264



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/118 (41%), Positives = 74/118 (62%), Gaps = 1/118 (0%)

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           L  S+ N  +++ LDL   +LE+LP EIG  + L++LIL  N+L ++P+ IG L NL  L
Sbjct: 9   LEKSLQNPSEVRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEIGKLRNLETL 68

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            + EN L++IP EI  L+NL TL L +N  L+N+P  +    NL+ ++L    LS +P
Sbjct: 69  ILAENRLKTIPNEIEQLQNLKTLDLYENK-LSNLPNGIGKLENLKELNLSGNQLSVLP 125



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 83/145 (57%), Gaps = 3/145 (2%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L + +QN   + +L LS+  L+ LP  IG  + L+ L L  N+L ++P EIG L+ L+ L
Sbjct: 9   LEKSLQNPSEVRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEIGKLRNLETL 68

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           IL  N+L ++P  I  L NL  L + EN L ++P  IG LENL  L L+ N  L+ +P  
Sbjct: 69  ILAENRLKTIPNEIEQLQNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQ-LSVLP-- 125

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIV 562
           +A   NL+I+ L     + +P EI 
Sbjct: 126 IAQLQNLEILELFRNQFTTLPKEIT 150


>gi|431907791|gb|ELK11398.1| Protein LAP2 [Pteropus alecto]
          Length = 1479

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 72  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 119

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 120 -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 168

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G    L  L+L+ N+L
Sbjct: 169 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLIKLQILELRENQL 228

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 229 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 287

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 288 TYLDVSKNN------------------------IEMVEEGI-SACENLQDLLLSSNSLQQ 322

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSS+G L  ++  
Sbjct: 323 LPETIGSLKNVTTLKIDENQLMFLPDSIGGLISIEELDCSFNEVEALPSSVGQLTNIRTF 382

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 383 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMEKLKVINLSDNRLKNLPFSF 442

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 443 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 486



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 174/363 (47%), Gaps = 35/363 (9%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 151 ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 210

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +  L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 211 NFGRLIKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 270

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 271 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSL 330

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 331 KNVTTLKIDENQLMFLPDSIGGLISIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQ 390

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
            LP      + S  NIT+                     +    N+++ +P  +    K 
Sbjct: 391 QLP----PEIGSWKNITV---------------------LFLHSNKLETLPEEMGDMEK- 424

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV--LVLSNNLLK 439
           L  +N+ DN L +LP        LT + L  NQ SK    +Q   + E   +VL+N +  
Sbjct: 425 LKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQ-SKPLIPLQKETDSETQKMVLTNYMFP 483

Query: 440 KLP 442
           + P
Sbjct: 484 QQP 486



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 116/219 (52%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN- 424
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 111 NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 169

Query: 425 ----------------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
                                 L+NL  L L++  L+ LP++ G L KL+ L+L EN+L+
Sbjct: 170 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLIKLQILELRENQLK 229

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 230 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 289

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  +   ++ C NLQ + L +  L Q+P  I
Sbjct: 290 LDVSKNN-IEMVEEGISACENLQDLLLSSNSLQQLPETI 327


>gi|429962971|gb|ELA42515.1| hypothetical protein VICG_00614 [Vittaforma corneae ATCC 50505]
          Length = 835

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 130/362 (35%), Positives = 185/362 (51%), Gaps = 29/362 (8%)

Query: 205 IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTML 264
           I+ +  DI  L NL  L ++ N ++ LPPE+GELKNL  LDL +N LE LP EI     L
Sbjct: 56  IRFIGSDIGRLVNLEKLDLKGNNLKALPPEIGELKNLQHLDLRNNKLESLPPEIEELKNL 115

Query: 265 VTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
             LDL  N+L  +P  +  L NL  L L YN+ ES P  + K                  
Sbjct: 116 QHLDLGDNKLKALPYEVEELKNLQHLDLGYNQFESFPTVIRK------------------ 157

Query: 325 DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
                 L ++  + L+ NKF  +P     +   +  +    N++  +P  I    K L +
Sbjct: 158 ------LKNLERLILNNNKFGLFPIE-IAELKKLQILYLRGNKLKLLPDEI-GEMKELRE 209

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
           + + DN L S P  +     L  L+LG N+       I  L NL+ L L++N LK LP  
Sbjct: 210 LGLDDNELESFPTVIAELRKLQTLDLGYNEFESFPTVIVKLKNLQYLFLNDNKLKLLPDE 269

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
           IG L  L+ L+L  NKLE+LP  IG L+ L  L L  N L SLP  IG L NL  L++G 
Sbjct: 270 IGELENLRELNLRGNKLETLPPVIGELENLYVLELYKNNLESLPDVIGKLKNLGMLNLGN 329

Query: 505 NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFEL-ALCSNLQIMSLDNCPLSQI-PSEIV 562
           N ++++P  IG L+NL  LYL+DN  L  +P E+  L  +L++++L    +S++   E  
Sbjct: 330 NKIETLPAAIGELQNLRELYLSDNK-LETLPVEIEKLSGSLRLLNLMGNNMSEVGDGERT 388

Query: 563 VG 564
           VG
Sbjct: 389 VG 390



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 183/369 (49%), Gaps = 27/369 (7%)

Query: 145 YVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR 204
           Y  + T + +    +  +   +  L  L  LDL+ N L  LP  + +L +L+ L LR N+
Sbjct: 42  YPVDTTVISICRQGIRFIGSDIGRLVNLEKLDLKGNNLKALPPEIGELKNLQHLDLRNNK 101

Query: 205 IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTML 264
           ++++ P+I+ L NL  L + DNK++ LP E+ ELKNL  LDL +N  E  P  I     L
Sbjct: 102 LESLPPEIEELKNLQHLDLGDNKLKALPYEVEELKNLQHLDLGYNQFESFPTVIRKLKNL 161

Query: 265 VTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
             L L +N+    P  +  L  L  L L  N+L+ +P+ + +   L E  ++   L S P
Sbjct: 162 ERLILNNNKFGLFPIEIAELKKLQILYLRGNKLKLLPDEIGEMKELRELGLDDNELESFP 221

Query: 325 DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
             +++ L  +  + L  N+F ++P+                         +  + KNL  
Sbjct: 222 T-VIAELRKLQTLDLGYNEFESFPT-------------------------VIVKLKNLQY 255

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
           + + DN L  LP ++G    L ELNL  N++  L   I  L NL VL L  N L+ LP  
Sbjct: 256 LFLNDNKLKLLPDEIGELENLRELNLRGNKLETLPPVIGELENLYVLELYKNNLESLPDV 315

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN-LSYLSVG 503
           IG L+ L  L+L  NK+E+LP  IG L+ L+ L L  N+L +LP  I  L+  L  L++ 
Sbjct: 316 IGKLKNLGMLNLGNNKIETLPAAIGELQNLRELYLSDNKLETLPVEIEKLSGSLRLLNLM 375

Query: 504 ENNLQSIPE 512
            NN+  + +
Sbjct: 376 GNNMSEVGD 384



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/320 (33%), Positives = 176/320 (55%), Gaps = 4/320 (1%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDL  +++  LPP + +L +L+ L L  NKL SLP +I  + NL  L L +N L +
Sbjct: 68  NLEKLDLKGNNLKALPPEIGELKNLQHLDLRNNKLESLPPEIEELKNLQHLDLGDNKLKA 127

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L+ L+ LDL +N+    P V+ KL +L+ L L  N+      +I  L  L +L
Sbjct: 128 LPYEVEELKNLQHLDLGYNQFESFPTVIRKLKNLERLILNNNKFGLFPIEIAELKKLQIL 187

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +R NK++ LP E+GE+K L  L L  N LE  P  I     L TLDL +NE  + P ++
Sbjct: 188 YLRGNKLKLLPDEIGEMKELRELGLDDNELESFPTVIAELRKLQTLDLGYNEFESFPTVI 247

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L L+ N+L+ +P+ + +  +L E N+ G  L +LP  ++  L ++  + L +
Sbjct: 248 VKLKNLQYLFLNDNKLKLLPDEIGELENLRELNLRGNKLETLPP-VIGELENLYVLELYK 306

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N   + P     +  ++  +N  +N+I+ +P  I    +NL ++ + DN L +LP+++  
Sbjct: 307 NNLESLPD-VIGKLKNLGMLNLGNNKIETLPAAI-GELQNLRELYLSDNKLETLPVEIEK 364

Query: 402 WVG-LTELNLGTNQISKLSE 420
             G L  LNL  N +S++ +
Sbjct: 365 LSGSLRLLNLMGNNMSEVGD 384



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 92/231 (39%), Positives = 136/231 (58%), Gaps = 5/231 (2%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L L+ +     P  + +L  L+ LYL GNKL  LP +IG +  L  LGL +N 
Sbjct: 157 KLKNLERLILNNNKFGLFPIEIAELKKLQILYLRGNKLKLLPDEIGEMKELRELGLDDNE 216

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L S P  +A L++L+ LDL +N+    P V+ KL +L+ L+L  N++K +  +I  L NL
Sbjct: 217 LESFPTVIAELRKLQTLDLGYNEFESFPTVIVKLKNLQYLFLNDNKLKLLPDEIGELENL 276

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++R NK+  LPP +GEL+NL  L+L  N+LE LP  IG    L  L+L +N++  +P
Sbjct: 277 RELNLRGNKLETLPPVIGELENLYVLELYKNNLESLPDVIGKLKNLGMLNLGNNKIETLP 336

Query: 279 DMLGNLINLTRLRLSYNRLESVP---ETLSKCVHLNEFNVEGCALSSLPDG 326
             +G L NL  L LS N+LE++P   E LS  + L   N+ G  +S + DG
Sbjct: 337 AAIGELQNLRELYLSDNKLETLPVEIEKLSGSLRL--LNLMGNNMSEVGDG 385



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/322 (33%), Positives = 162/322 (50%), Gaps = 7/322 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           + + +  I  +   + +L +LE+L L GN L +LP +IG + NL  L L  N L SLP  
Sbjct: 49  ISICRQGIRFIGSDIGRLVNLEKLDLKGNNLKALPPEIGELKNLQHLDLRNNKLESLPPE 108

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ LDL  NKL  LP  V +L +L+ L L +N+ ++    I+ L NL  L + +
Sbjct: 109 IEELKNLQHLDLGDNKLKALPYEVEELKNLQHLDLGYNQFESFPTVIRKLKNLERLILNN 168

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK    P E+ ELK L  L L  N L+ LP EIG    L  L L  NEL + P ++  L 
Sbjct: 169 NKFGLFPIEIAELKKLQILYLRGNKLKLLPDEIGEMKELRELGLDDNELESFPTVIAELR 228

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L YN  ES P  + K  +L    +    L  LPD  +  L ++  + L  NK  
Sbjct: 229 KLQTLDLGYNEFESFPTVIVKLKNLQYLFLNDNKLKLLPDE-IGELENLRELNLRGNKLE 287

Query: 346 AYPSGGPT--QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
             P   P   +  ++Y +    N ++ +P  +  + KNL  +N+ +N + +LP  +G   
Sbjct: 288 TLP---PVIGELENLYVLELYKNNLESLP-DVIGKLKNLGMLNLGNNKIETLPAAIGELQ 343

Query: 404 GLTELNLGTNQISKLSEDIQNL 425
            L EL L  N++  L  +I+ L
Sbjct: 344 NLRELYLSDNKLETLPVEIEKL 365



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 188/391 (48%), Gaps = 23/391 (5%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +LDL  + +  LPP +E+L +L+ L L  NKL +LP ++  + NL  L L  N   
Sbjct: 90  KNLQHLDLRNNKLESLPPEIEELKNLQHLDLGDNKLKALPYEVEELKNLQHLDLGYNQFE 149

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           S P  +  L+ L  L L +NK    P+ + +L  L+ILYLR N++K +  +I  +  L  
Sbjct: 150 SFPTVIRKLKNLERLILNNNKFGLFPIEIAELKKLQILYLRGNKLKLLPDEIGEMKELRE 209

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN++   P  + EL+ L TLDL +N  E  P  I     L  L L  N+L  +PD 
Sbjct: 210 LGLDDNELESFPTVIAELRKLQTLDLGYNEFESFPTVIVKLKNLQYLFLNDNKLKLLPDE 269

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+LE++P  + +  +L    +    L SLPD ++  L ++  + L 
Sbjct: 270 IGELENLRELNLRGNKLETLPPVIGELENLYVLELYKNNLESLPD-VIGKLKNLGMLNLG 328

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            NK    P+    +  ++  +    N+++ +P  I   + +L  +N+  N ++ +  D  
Sbjct: 329 NNKIETLPA-AIGELQNLRELYLSDNKLETLPVEIEKLSGSLRLLNLMGNNMSEVG-DGE 386

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLV-------------LSNNLLKKL-PSSIG 446
             VG  EL         L  DI      E+ V              +  +L+ L P S+ 
Sbjct: 387 RTVGRRELRAIFGDRVVLDNDIVEYEEDEISVGDVYSELKSKPMHWNFEMLRTLRPQSVP 446

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
              +LKC    E +L  L NE  F++E  RL
Sbjct: 447 ---ELKC---SEEELVRLWNESMFVREWDRL 471



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 87/159 (54%), Gaps = 1/159 (0%)

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
           V  T +++    I  +  DI  LVNLE L L  N LK LP  IG L+ L+ LDL  NKLE
Sbjct: 44  VDTTVISICRQGIRFIGSDIGRLVNLEKLDLKGNNLKALPPEIGELKNLQHLDLRNNKLE 103

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
           SLP EI  LK LQ L L  N+L +LP  +  L NL +L +G N  +S P  I  L+NL  
Sbjct: 104 SLPPEIEELKNLQHLDLGDNKLKALPYEVEELKNLQHLDLGYNQFESFPTVIRKLKNLER 163

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L LN+N      P E+A    LQI+ L    L  +P EI
Sbjct: 164 LILNNNK-FGLFPIEIAELKKLQILYLRGNKLKLLPDEI 201


>gi|456971330|gb|EMG11963.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Grippotyphosa str. LT2186]
          Length = 349

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/307 (37%), Positives = 179/307 (58%), Gaps = 5/307 (1%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L + + K+  LP E+ +L+NL  LDL HN L  LPKEIG    L  L L +N+L  
Sbjct: 47  DVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTA 106

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L NL  L L+ N+L ++P  + +  +L   ++    L++LP  +   L ++  
Sbjct: 107 LPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEI-GKLENLQL 165

Query: 337 ITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
           ++L  ++ T  P   G  Q  +++ ++  HNQ+  +P  I  + +NL +  + +N LT L
Sbjct: 166 LSLYESQLTILPQEIGKLQ--NLHELDLSHNQLTILPKEI-GQLQNLQRFVLDNNQLTIL 222

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L EL LG NQ++ L ++I  L NL+  VL NN    LP  IG L+ L+ L 
Sbjct: 223 PKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELY 282

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L  N+L + P EIG L++LQ L L +NQL +LP  I  L NL  L++ EN L++IP+EIG
Sbjct: 283 LSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIG 342

Query: 516 TLENLHT 522
            L+NL +
Sbjct: 343 QLQNLKS 349



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/296 (35%), Positives = 174/296 (58%), Gaps = 5/296 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS+  +T LP  +++L +L+ L L  N+L +LP +IG + NL  L L  N LT+LP  
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VL L +N+L  LP  + +L +L++L L  N++ T+  +I  L NL +LS+ +
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYE 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           +++  LP E+G+L+NL  LDL+HN L  LPKEIG    L    L +N+L  +P  +G L 
Sbjct: 171 SQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQ 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L +N+L  +P+ + +  +L  F ++    + LP   +  L ++  + LS N+ T
Sbjct: 231 NLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKE-IGQLQNLQELYLSYNQLT 289

Query: 346 AYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            +P   G  Q   + ++N  +NQ+  +P  I  + KNL  +N+ +N L ++P ++G
Sbjct: 290 TFPKEIGKLQ--KLQTLNLWNNQLTTLPEEI-EQLKNLKTLNLSENQLKTIPQEIG 342



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 114/334 (34%), Positives = 179/334 (53%), Gaps = 7/334 (2%)

Query: 145 YVTNLTCLGLAE--NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           +  +L+C   AE   +   L  +L N   +RVL L   KL  LP  + +L +LK+L L  
Sbjct: 19  FFIHLSCEIQAEEPGTYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGH 78

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N++  +  +I  L NL +L +  N++  LP E+G+LKNL  L L +N L  LP EI    
Sbjct: 79  NQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLK 138

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  LDL +N+L  +P  +G L NL  L L  ++L  +P+ + K  +L+E ++    L+ 
Sbjct: 139 NLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTI 198

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
           LP   +  L ++    L  N+ T  P   G  Q  +++ +   HNQ+  +P  I  + +N
Sbjct: 199 LPKE-IGQLQNLQRFVLDNNQLTILPKEIGKLQ--NLHELYLGHNQLTILPKEI-GQLQN 254

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           L +  + +N  T LP ++G    L EL L  NQ++   ++I  L  L+ L L NN L  L
Sbjct: 255 LQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTL 314

Query: 442 PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           P  I  L+ LK L+L EN+L+++P EIG L+ L+
Sbjct: 315 PEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLK 348



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 113/319 (35%), Positives = 165/319 (51%), Gaps = 27/319 (8%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            L L+   L  LPKEI     L  LDL HN+L  +P  +G L NL  L L YN+L ++P+
Sbjct: 50  VLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPK 109

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + +  +L    +    L++LP       T I                   Q  ++  ++
Sbjct: 110 EIGQLKNLKVLFLNNNQLTTLP-------TEIR------------------QLKNLQMLD 144

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQ+  +P  I  + +NL  +++ ++ LT LP ++G    L EL+L  NQ++ L ++I
Sbjct: 145 LGNNQLTTLPKEI-GKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEI 203

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NL+  VL NN L  LP  IG L+ L  L L  N+L  LP EIG L+ LQR +L +N
Sbjct: 204 GQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNN 263

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           Q   LP+ IG L NL  L +  N L + P+EIG L+ L TL L +N  L  +P E+    
Sbjct: 264 QFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQ-LTTLPEEIEQLK 322

Query: 543 NLQIMSLDNCPLSQIPSEI 561
           NL+ ++L    L  IP EI
Sbjct: 323 NLKTLNLSENQLKTIPQEI 341



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/275 (34%), Positives = 150/275 (54%), Gaps = 2/275 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  + +L +L+ L LY N+L +LP +IG + NL  L L  N LT
Sbjct: 69  QNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLT 128

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L++LDL +N+L  LP  + KL +L++L L  +++  +  +I  L NL  
Sbjct: 129 TLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHE 188

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+L+NL    L +N L  LPKEIG    L  L L HN+L  +P  
Sbjct: 189 LDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKE 248

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL R  L  N+   +P+ + +  +L E  +    L++ P   +  L  +  + L 
Sbjct: 249 IGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKE-IGKLQKLQTLNLW 307

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
            N+ T  P     Q  ++ ++N   NQ+  IP  I
Sbjct: 308 NNQLTTLPE-EIEQLKNLKTLNLSENQLKTIPQEI 341



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/210 (38%), Positives = 124/210 (59%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  + KL +L+ L LY ++L  LP +IG + NL  L L+ N LT
Sbjct: 138 KNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLT 197

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+   L +N+L  LP  + KL +L  LYL  N++  +  +I  L NL  
Sbjct: 198 ILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQR 257

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
             + +N+   LP E+G+L+NL  L L++N L   PKEIG    L TL+L +N+L  +P+ 
Sbjct: 258 FVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEE 317

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           +  L NL  L LS N+L+++P+ + +  +L
Sbjct: 318 IEQLKNLKTLNLSENQLKTIPQEIGQLQNL 347



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/151 (45%), Positives = 91/151 (60%), Gaps = 3/151 (1%)

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
           GT Q   L++ +QN +++ VL+LS   L  LP  I  L+ LK LDL  N+L +LP EIG 
Sbjct: 33  GTYQ--DLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQ 90

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           LK LQ LIL  NQL +LP+ IG L NL  L +  N L ++P EI  L+NL  L L +N  
Sbjct: 91  LKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQ- 149

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  +P E+    NLQ++SL    L+ +P EI
Sbjct: 150 LTTLPKEIGKLENLQLLSLYESQLTILPQEI 180



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 56/96 (58%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+    L  +  T LP  + +L +L+ELYL  N+L + P +IG +  L  L L  N LT
Sbjct: 253 QNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLT 312

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLK 196
           +LP+ +  L+ L+ L+L  N+L  +P  + +L +LK
Sbjct: 313 TLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLK 348


>gi|62646782|ref|XP_216085.3| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Rattus norvegicus]
 gi|109473061|ref|XP_001068373.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Rattus norvegicus]
          Length = 855

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 143/505 (28%), Positives = 242/505 (47%), Gaps = 53/505 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+ S + I+H+P  + +L ++ +L+L  N + SLPS +  +  L  L L +N LT +PDS
Sbjct: 212 LNASYNEISHIPKELLQLGNMRQLFLNSNHIESLPSGLENLRYLETLSLGKNRLTHIPDS 271

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L  L+ L+ L+L +N+L      +  L  L  L L  N I ++  +++ L NL  L M  
Sbjct: 272 LCGLKNLKTLNLEYNQLTIFSKSLCFLPKLVSLNLTGNMIGSLPKEVRELKNLENLLMNH 331

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEEL-----------------------PKEIGNCT 262
           NK+  L  E+ +L  +  L LA N LE +                       PK+I +C 
Sbjct: 332 NKLTFLAVEIFQLLKIKELHLADNKLEAISPKIENFKELRLLNLDNNLLQSLPKKISHCV 391

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L +L L  N L  +P  +  L NL +L  + N++  + E +S    ++     G  ++ 
Sbjct: 392 NLESLTLSDNNLEELPKKIRKLKNLRQLHANRNKMIKMAEEISHLSKIHSLEFSGNQITH 451

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P   + +   I  + L+ N    +P  G     S+  ++F  N I +IP  + S +K L
Sbjct: 452 VPIE-IKNCKEITRVELNYNNIMYFPV-GLCALQSLDYLSFNGNYISEIPVDL-SFSKQL 508

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + +  N +T     L +   L  L+L  NQI K+   I  +++L VL+LS+N  +  P
Sbjct: 509 LHLELNKNKITIFSEHLCSLTNLEYLDLAKNQIRKIPHCISAMLSLHVLILSDNKFEIFP 568

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN-------------------- 482
             + +L+ L+ LD+ EN+L  +P+EI  LK++Q+L L +N                    
Sbjct: 569 KELCSLKNLQLLDISENQLHKIPSEISKLKKIQKLNLSNNNFTHFPAELCQLQTLEDLNI 628

Query: 483 ------QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
                 +L  LP  +  +T L  L++  N ++ IP  IG L NL T + ++N  +N++P 
Sbjct: 629 SQISGKKLTRLPEEVSRMTQLKALNISNNAIKEIPRNIGELRNLITFHASNNQ-INSLPS 687

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEI 561
                + LQ + L    L+ +PS I
Sbjct: 688 SFLSLNVLQSLDLGGNNLTDLPSAI 712



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 228/489 (46%), Gaps = 73/489 (14%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L K+ +TH+P S+  L +L+ L L  N+L      + ++  L  L L  N + SLP  
Sbjct: 258 LSLGKNRLTHIPDSLCGLKNLKTLNLEYNQLTIFSKSLCFLPKLVSLNLTGNMIGSLPKE 317

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ------------ 213
           +  L+ L  L + HNKL  L + +++L  +K L+L  N+++ + P I+            
Sbjct: 318 VRELKNLENLLMNHNKLTFLAVEIFQLLKIKELHLADNKLEAISPKIENFKELRLLNLDN 377

Query: 214 -----------YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
                      +  NL  L++ DN + ELP ++ +LKNL  L    N + ++ +EI + +
Sbjct: 378 NLLQSLPKKISHCVNLESLTLSDNNLEELPKKIRKLKNLRQLHANRNKMIKMAEEISHLS 437

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            + +L+   N++ ++P  + N   +TR+ L+YN +   P  L     L+  +  G  +S 
Sbjct: 438 KIHSLEFSGNQITHVPIEIKNCKEITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISE 497

Query: 323 LPDGL---------------------------------------------LSSLTSINNI 337
           +P  L                                             +S++ S++ +
Sbjct: 498 IPVDLSFSKQLLHLELNKNKITIFSEHLCSLTNLEYLDLAKNQIRKIPHCISAMLSLHVL 557

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            LS NKF  +P        ++  ++   NQ+ KIP  I S+ K + K+N+ +N  T  P 
Sbjct: 558 ILSDNKFEIFPKE-LCSLKNLQLLDISENQLHKIPSEI-SKLKKIQKLNLSNNNFTHFPA 615

Query: 398 DLGTWVGLTELNLGT---NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           +L     L +LN+      ++++L E++  +  L+ L +SNN +K++P +IG LR L   
Sbjct: 616 ELCQLQTLEDLNISQISGKKLTRLPEEVSRMTQLKALNISNNAIKEIPRNIGELRNLITF 675

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
               N++ SLP+    L  LQ L L  N L  LP AI  L++L  ++  +N L   P EI
Sbjct: 676 HASNNQINSLPSSFLSLNVLQSLDLGGNNLTDLPSAIYKLSSLKEINFDDNPLLRPPMEI 735

Query: 515 GTLENLHTL 523
              + +HT+
Sbjct: 736 CKGKQMHTI 744



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 194/449 (43%), Gaps = 72/449 (16%)

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVH------------------------PDIQYLSN 217
           L E P+ + K+  +K LYL  N+IKT                           +IQ   N
Sbjct: 149 LQEFPVDIVKVKYVKYLYLDKNQIKTFQGADPGDLLGLETLSLQENGLSSIPQEIQLFHN 208

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L +L+   N+I  +P EL +L N+  L L  NH+E LP  + N   L TL L  N L +I
Sbjct: 209 LKVLNASYNEISHIPKELLQLGNMRQLFLNSNHIESLPSGLENLRYLETLSLGKNRLTHI 268

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           PD L  L NL  L L YN+L    ++L     L   N+ G  + SLP   +  L ++ N+
Sbjct: 269 PDSLCGLKNLKTLNLEYNQLTIFSKSLCFLPKLVSLNLTGNMIGSLPKE-VRELKNLENL 327

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI---------------------- 375
            ++ NK T + +    Q   +  ++   N+++ I   I                      
Sbjct: 328 LMNHNKLT-FLAVEIFQLLKIKELHLADNKLEAISPKIENFKELRLLNLDNNLLQSLPKK 386

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
            S   NL  + + DN L  LP  +     L +L+   N++ K++E+I +L  +  L  S 
Sbjct: 387 ISHCVNLESLTLSDNNLEELPKKIRKLKNLRQLHANRNKMIKMAEEISHLSKIHSLEFSG 446

Query: 436 NLLKKLPSSIGN-----------------------LRKLKCLDLEENKLESLPNEIGFLK 472
           N +  +P  I N                       L+ L  L    N +  +P ++ F K
Sbjct: 447 NQITHVPIEIKNCKEITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDLSFSK 506

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
           +L  L L  N++      +  LTNL YL + +N ++ IP  I  + +LH L L+DN    
Sbjct: 507 QLLHLELNKNKITIFSEHLCSLTNLEYLDLAKNQIRKIPHCISAMLSLHVLILSDNK-FE 565

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             P EL    NLQ++ +    L +IPSEI
Sbjct: 566 IFPKELCSLKNLQLLDISENQLHKIPSEI 594


>gi|260826692|ref|XP_002608299.1| hypothetical protein BRAFLDRAFT_89276 [Branchiostoma floridae]
 gi|229293650|gb|EEN64309.1| hypothetical protein BRAFLDRAFT_89276 [Branchiostoma floridae]
          Length = 2303

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 251/492 (51%), Gaps = 39/492 (7%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNK---------------------- 135
           CK E+I +LDL  + +T +P  +E L +L+ L L GN+                      
Sbjct: 54  CKMEDIQSLDLRSNYLTSIPDDIENLRNLKVLNLSGNRIVEYSFLSKLRTLVELDLSNQN 113

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L S+P ++  + +L  L +A N +T +P S+  L+ LR+LD+  N+++  P  +  L +L
Sbjct: 114 LRSIPEEVFNIHSLEILRVANNGITEIPKSILKLKGLRILDVSGNRISSFP--ISTLGTL 171

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH---LE 252
           K LY+   +++T+  ++  L  L +L + +NK++ LP +LG+L  L  L L  N+    E
Sbjct: 172 KELYISRVQLQTIPEEVFALEELEVLDISNNKVKYLPVKLGKLYRLRVLKLGGNNVCSFE 231

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
            +P        L  LDL    L +IP     L NL  L+L+ N++ ++P  + + + L  
Sbjct: 232 VMPA----LQCLEELDLSDMRLKSIPKEAFYLTNLKTLKLNNNKIRTIPADIERPMALQT 287

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYS---INFEHNQID 369
             ++   +SS+ + +L  +  + +++LS N  T   SG P     + S   +N + N++ 
Sbjct: 288 LLLDNNKISSVSE-VLDKMKFLRHLSLSNNNLT--DSGFPVDDVDIISLEHLNLDGNKLT 344

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
            IP  ++ +A+ L  ++ + N +  LP ++     +  L L  N+I ++++D+  L  + 
Sbjct: 345 AIPTCVY-QAQKLVCLSAEGNRIRVLPEEIAGLKDIRVLKLKNNRIRQVADDVAELCEIR 403

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR 489
            L LS N L  +  SI  +R ++ LDL +N++  +P EI  L+ LQ L L+   L  +  
Sbjct: 404 HLDLSENRLNGIHPSILEMRHMESLDLSKNRVIKIPREISHLRRLQTLKLRGTDLREVNE 463

Query: 490 AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
            +  + +L  L +G+N    I E++  L  L TL L D   L+ +P EL    NL+++ +
Sbjct: 464 ELFTIDDLRELDIGQNPRMFISEKVSKLRCLKTLSL-DGCRLSGLPRELFELPNLEVLDI 522

Query: 550 DNCPLSQIPSEI 561
            +  +  IP+ I
Sbjct: 523 SDNDIRTIPTAI 534



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 232/483 (48%), Gaps = 31/483 (6%)

Query: 105 NLDLSKSSITH--LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           +L LS +++T    P     +  LE L L GNKL ++P+ +     L CL    N +  L
Sbjct: 310 HLSLSNNNLTDSGFPVDDVDIISLEHLNLDGNKLTAIPTCVYQAQKLVCLSAEGNRIRVL 369

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+ +A L+ +RVL L++N++ ++   V +L  ++ L L  NR+  +HP I  + ++  L 
Sbjct: 370 PEEIAGLKDIRVLKLKNNRIRQVADDVAELCEIRHLDLSENRLNGIHPSILEMRHMESLD 429

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ++P E+  L+ L TL L    L E+ +E+     L  LD+  N  + I + + 
Sbjct: 430 LSKNRVIKIPREISHLRRLQTLKLRGTDLREVNEELFTIDDLRELDIGQNPRMFISEKVS 489

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L  L L   RL  +P  L +  +L   ++    + ++P   + +L  +  +  +R 
Sbjct: 490 KLRCLKTLSLDGCRLSGLPRELFELPNLEVLDISDNDIRTIPTA-IENLKKLKVLRANRL 548

Query: 343 KFTAYPSG--GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
              + P    G  +   ++    + N+I KI   I S  K L  +++ DN +  +P  LG
Sbjct: 549 FLDSVPYSILGLCKLRCLF---LQGNRIQKISESI-SMLKELQVLDLSDNKIRRIPAQLG 604

Query: 401 ------------TWVG----------LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
                        WV           L  LN+G+N +  L  ++  L  L+ L  S+N L
Sbjct: 605 EISTLQSVNVERNWVTDLTPICRLKYLETLNIGSNGLYSLPGNLVELSQLKHLRASHNRL 664

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
             LP   G L +LK LDL +N +ESLP+    L  L  L L SN + S P  +  +  L+
Sbjct: 665 TSLPEQFGKLSRLKVLDLTKNNIESLPDSFSSLNALSVLRLASNDMSSFPTEVCGINTLT 724

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            + +  N + S+P  +G LEN+  L L+ N   +++   ++  ++L+ + L    ++++P
Sbjct: 725 DIDLSSNKIPSLPFGVGLLENVEALNLSKNKLPDDMHDFISQMTSLKHLDLSQTGMTKVP 784

Query: 559 SEI 561
             I
Sbjct: 785 ETI 787



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 227/467 (48%), Gaps = 9/467 (1%)

Query: 98   CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS-QIGYVTNLTCLGLAE 156
            C+  N+  LDL  + +  +P  +  L+ L  L L GNK+A + +  +     L  L L+ 
Sbjct: 994  CELPNLEYLDLRHNQLEKVPTDIGSLSQLRVLLLSGNKIAYVTTIDLAKAVELVLLDLSR 1053

Query: 157  NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
            N LTS+P S+     LRVL L  NK+  +P  + + T L  L LR NRI  V  ++  L 
Sbjct: 1054 NLLTSIPSSVCQSASLRVLKLNENKIEGVPTYISRATGLTELQLRGNRIFVVCREVSELH 1113

Query: 217  NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
            NL  + +  N +  LP  +  + NL  LD++HN +  L  ++     + T     N++  
Sbjct: 1114 NLRKVDLSYNHLSTLPLSICHMSNLEALDISHNRIYYLSSDVQKMKKIRTFRAVGNKIHQ 1173

Query: 277  IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
            +P+ +  L  L  + L  N +  +P  +   V   + +  G +      G + +L  +N 
Sbjct: 1174 LPEQILKLDRLEHVVLHDNNINLLPSAMPPNVVTLDLSCNGISRLGSSLGQMQNLEVLN- 1232

Query: 337  ITLSRNKF-TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
              L+ N+  +     GP  F S+  +N  +N I  +P       ++L+ ++   N ++ L
Sbjct: 1233 --LADNRVDSCRGVFGPNTFPSLRVLNVRNNAIMALPN--IGHLRSLTSLDATANSISDL 1288

Query: 396  PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
             +DL     L  L    N I+++ ++I  L ++E+L LS N L  L   +  L K++ L 
Sbjct: 1289 -VDLCNASDLRVLKADNNLITEVPDEIAKLEHIELLSLSGNWLDDLSPHLSELSKIRRLV 1347

Query: 456  LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
                 L  +P E+G L+ L+ + L+ N+L   P  + +L +L+ +++  N L  IP+E+ 
Sbjct: 1348 FNSCMLTEVPPEVGELRTLRSIELKDNELADFPDVLLYLPHLANVALDGNKLDIIPDEVR 1407

Query: 516  TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
              E+L  + L+ N  +  +P  L   +NLQ + +    L+ +P++IV
Sbjct: 1408 RFESLKIMSLSRNN-IETLPSTLCHVNNLQWLDVRKNKLTTLPADIV 1453



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 233/526 (44%), Gaps = 60/526 (11%)

Query: 96   LRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIG----------- 144
            LRC       L L  + I  +  S+  L  L+ L L  NK+  +P+Q+G           
Sbjct: 563  LRC-------LFLQGNRIQKISESISMLKELQVLDLSDNKIRRIPAQLGEISTLQSVNVE 615

Query: 145  --YVTNLT---------CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLT 193
              +VT+LT          L +  N L SLP +L  L QL+ L   HN+L  LP    KL+
Sbjct: 616  RNWVTDLTPICRLKYLETLNIGSNGLYSLPGNLVELSQLKHLRASHNRLTSLPEQFGKLS 675

Query: 194  SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
             LK+L L  N I+++      L+ LS+L +  N +   P E+  +  L  +DL+ N +  
Sbjct: 676  RLKVLDLTKNNIESLPDSFSSLNALSVLRLASNDMSSFPTEVCGINTLTDIDLSSNKIPS 735

Query: 254  LPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
            LP  +G    +  L+L  N+L + + D +  + +L  L LS   +  VPET+S+   L  
Sbjct: 736  LPFGVGLLENVEALNLSKNKLPDDMHDFISQMTSLKHLDLSQTGMTKVPETISRLEELEY 795

Query: 313  FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
             N+    L  +P  +   L  +  +  S N     P     Q + V  +    N +D++ 
Sbjct: 796  LNISSNKLQYIPSEMFE-LPFLEELDASDNVLKELPVDA-VQESDVERLLLGGNHLDELS 853

Query: 373  YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
              I +    L ++++  N L  LP  L     L  LNL  N++     +   L+ LEVL 
Sbjct: 854  RNI-NTLMYLERLDLSRNNLRDLPESLSFLPCLEILNLSGNRLRHFPPEFSGLM-LEVLD 911

Query: 433  LSNNLLKKLPSSIGNLRKLKCL-----------------------DLEENKLESLPNEIG 469
            LS+N L+ +P  + ++  L+ L                       D+  N + S+P  I 
Sbjct: 912  LSDNGLRFVPREVTDMLSLQTLNISRNRIKVIGDRMCQLDSLVDLDISRNSVTSIPENIC 971

Query: 470  FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
             L  ++RL    N + S+ R +  L NL YL +  N L+ +P +IG+L  L  L L+ N 
Sbjct: 972  LLANMERLTASHNNISSIIRDVCELPNLEYLDLRHNQLEKVPTDIGSLSQLRVLLLSGNK 1031

Query: 530  CLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKM 575
                   +LA    L ++ L    L+ IPS +     S  +R LK+
Sbjct: 1032 IAYVTTIDLAKAVELVLLDLSRNLLTSIPSSVC---QSASLRVLKL 1074



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 143/536 (26%), Positives = 233/536 (43%), Gaps = 97/536 (18%)

Query: 89   LNIEKEFLR-----CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQI 143
            +N+E+ ++      C+ + +  L++  + +  LP ++ +L+ L+ L    N+L SLP Q 
Sbjct: 612  VNVERNWVTDLTPICRLKYLETLNIGSNGLYSLPGNLVELSQLKHLRASHNRLTSLPEQF 671

Query: 144  GYVTNLTCLGLAENSLTSLPDSLANLQQLRVL-----------------------DLRHN 180
            G ++ L  L L +N++ SLPDS ++L  L VL                       DL  N
Sbjct: 672  GKLSRLKVLDLTKNNIESLPDSFSSLNALSVLRLASNDMSSFPTEVCGINTLTDIDLSSN 731

Query: 181  KLNELPM------------------------VVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
            K+  LP                          + ++TSLK L L    +  V   I  L 
Sbjct: 732  KIPSLPFGVGLLENVEALNLSKNKLPDDMHDFISQMTSLKHLDLSQTGMTKVPETISRLE 791

Query: 217  NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
             L  L++  NK++ +P E+ EL  L  LD + N L+ELP +    + +  L L  N L  
Sbjct: 792  ELEYLNISSNKLQYIPSEMFELPFLEELDASDNVLKELPVDAVQESDVERLLLGGNHLDE 851

Query: 277  IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP------------ 324
            +   +  L+ L RL LS N L  +PE+LS    L   N+ G  L   P            
Sbjct: 852  LSRNINTLMYLERLDLSRNNLRDLPESLSFLPCLEILNLSGNRLRHFPPEFSGLMLEVLD 911

Query: 325  ---DGL------LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
               +GL      ++ + S+  + +SRN+          Q  S+  ++   N +  IP  I
Sbjct: 912  LSDNGLRFVPREVTDMLSLQTLNISRNRIKVI-GDRMCQLDSLVDLDISRNSVTSIPENI 970

Query: 376  FSRAK----------------------NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
               A                       NL  ++++ N L  +P D+G+   L  L L  N
Sbjct: 971  CLLANMERLTASHNNISSIIRDVCELPNLEYLDLRHNQLEKVPTDIGSLSQLRVLLLSGN 1030

Query: 414  QISKLSE-DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
            +I+ ++  D+   V L +L LS NLL  +PSS+     L+ L L ENK+E +P  I    
Sbjct: 1031 KIAYVTTIDLAKAVELVLLDLSRNLLTSIPSSVCQSASLRVLKLNENKIEGVPTYISRAT 1090

Query: 473  ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
             L  L L+ N++  + R +  L NL  + +  N+L ++P  I  + NL  L ++ N
Sbjct: 1091 GLTELQLRGNRIFVVCREVSELHNLRKVDLSYNHLSTLPLSICHMSNLEALDISHN 1146



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 219/443 (49%), Gaps = 13/443 (2%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           +S+  +  +P  V  L  LE L +  NK+  LP ++G +  L  L L  N++ S  + + 
Sbjct: 176 ISRVQLQTIPEEVFALEELEVLDISNNKVKYLPVKLGKLYRLRVLKLGGNNVCSF-EVMP 234

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
            LQ L  LDL   +L  +P   + LT+LK L L  N+I+T+  DI+    L  L + +NK
Sbjct: 235 ALQCLEELDLSDMRLKSIPKEAFYLTNLKTLKLNNNKIRTIPADIERPMALQTLLLDNNK 294

Query: 228 IRELPPELGELKNLVTLDLAHNHLEE--LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           I  +   L ++K L  L L++N+L +   P +  +   L  L+L  N+L  IP  +    
Sbjct: 295 ISSVSEVLDKMKFLRHLSLSNNNLTDSGFPVDDVDIISLEHLNLDGNKLTAIPTCVYQAQ 354

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L    NR+  +PE ++    +    ++   +  + D  ++ L  I ++ LS N+  
Sbjct: 355 KLVCLSAEGNRIRVLPEEIAGLKDIRVLKLKNNRIRQVADD-VAELCEIRHLDLSENRLN 413

Query: 346 A-YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
             +PS    +   + S++   N++ KIP  I S  + L  + ++   L  +  +L T   
Sbjct: 414 GIHPS--ILEMRHMESLDLSKNRVIKIPREI-SHLRRLQTLKLRGTDLREVNEELFTIDD 470

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L EL++G N    +SE +  L  L+ L L    L  LP  +  L  L+ LD+ +N + ++
Sbjct: 471 LRELDIGQNPRMFISEKVSKLRCLKTLSLDGCRLSGLPRELFELPNLEVLDISDNDIRTI 530

Query: 465 PNEIGFLKELQRLILQSNQLV--SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
           P  I  LK+L+  +L++N+L   S+P +I  L  L  L +  N +Q I E I  L+ L  
Sbjct: 531 PTAIENLKKLK--VLRANRLFLDSVPYSILGLCKLRCLFLQGNRIQKISESISMLKELQV 588

Query: 523 LYLNDNTCLNNIPFELALCSNLQ 545
           L L+DN  +  IP +L   S LQ
Sbjct: 589 LDLSDNK-IRRIPAQLGEISTLQ 610



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 1/161 (0%)

Query: 98   CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
             K E+I  L LS + +  L P + +L+ +  L      L  +P ++G +  L  + L +N
Sbjct: 1315 AKLEHIELLSLSGNWLDDLSPHLSELSKIRRLVFNSCMLTEVPPEVGELRTLRSIELKDN 1374

Query: 158  SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
             L   PD L  L  L  + L  NKL+ +P  V +  SLKI+ L  N I+T+   + +++N
Sbjct: 1375 ELADFPDVLLYLPHLANVALDGNKLDIIPDEVRRFESLKIMSLSRNNIETLPSTLCHVNN 1434

Query: 218  LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
            L  L +R NK+  LP ++  L++   L  + N L   P+E+
Sbjct: 1435 LQWLDVRKNKLTTLPADIVRLEDPTIL-TSGNCLVSPPQEV 1474



 Score = 38.9 bits (89), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 6/111 (5%)

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
            DL +  L  L   +  ++++Q L L+SN L S+P  I +L NL  L++  N +     E
Sbjct: 39  FDLSDRCLSHLSVGVCKMEDIQSLDLRSNYLTSIPDDIENLRNLKVLNLSGNRIV----E 94

Query: 514 IGTLENLHTLYLND--NTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
              L  L TL   D  N  L +IP E+    +L+I+ + N  +++IP  I+
Sbjct: 95  YSFLSKLRTLVELDLSNQNLRSIPEEVFNIHSLEILRVANNGITEIPKSIL 145


>gi|418719131|ref|ZP_13278331.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|418738815|ref|ZP_13295208.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|421095752|ref|ZP_15556462.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410361414|gb|EKP12457.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410744284|gb|EKQ93025.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410745513|gb|EKQ98423.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 344

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/324 (36%), Positives = 177/324 (54%), Gaps = 5/324 (1%)

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
           +   +Q  S + +L +   ++  LP E+G  +NL  L L  N L  +PKEIG    L TL
Sbjct: 9   LEKSLQNPSEVRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEIGKLRNLETL 68

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
            L  N L  IP+ +  L NL  L L  N+L ++P  + K  +L E N+ G  LS LP   
Sbjct: 69  ILAENRLKTIPNEIEQLQNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVLP--- 125

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
           ++ L ++  + L RN+FT  P    T+  ++  +N   N+I  +P  I S+  NL  +++
Sbjct: 126 IAQLQNLEILELFRNQFTTLPKE-ITELKNLQILNLFENKIKILPKEI-SQLSNLIWLDL 183

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
             N +  L LD   +  L  LNL  N++  LS DI  L +LE L L+ N  K LP  I  
Sbjct: 184 GKNKIERLSLDFKGFQNLKSLNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKILPEEILQ 243

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           L  L+ L+L  N+L SLP EIG L++L+ L ++ N+L +LP  IGHL NL  L + +N L
Sbjct: 244 LENLQVLELTGNQLTSLPEEIGKLEKLESLFVEGNRLTTLPNGIGHLRNLKILHLEQNRL 303

Query: 508 QSIPEEIGTLENLHTLYLNDNTCL 531
            ++PEE+  L+NL  LYL ++   
Sbjct: 304 TTLPEEMRALQNLKELYLQNSNSF 327



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/307 (34%), Positives = 167/307 (54%), Gaps = 9/307 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS   +  LP  +    +LE+L L+ N+L ++P +IG + NL  L LAEN L ++P+ 
Sbjct: 22  LDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEIGKLRNLETLILAENRLKTIPNE 81

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ LDL  NKL+ LP  + KL +LK L L  N++ +V P I  L NL +L +  
Sbjct: 82  IEQLQNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQL-SVLP-IAQLQNLEILELFR 139

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+   LP E+ ELKNL  L+L  N ++ LPKEI   + L+ LDL  N++  +        
Sbjct: 140 NQFTTLPKEITELKNLQILNLFENKIKILPKEISQLSNLIWLDLGKNKIERLSLDFKGFQ 199

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+LE +   +++   L   N+       LP+ +L  L ++  + L+ N+ T
Sbjct: 200 NLKSLNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKILPEEILQ-LENLQVLELTGNQLT 258

Query: 346 AYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
           + P   G   +  S++    E N++  +P GI    +NL  ++++ N LT+LP ++    
Sbjct: 259 SLPEEIGKLEKLESLF---VEGNRLTTLPNGI-GHLRNLKILHLEQNRLTTLPEEMRALQ 314

Query: 404 GLTELNL 410
            L EL L
Sbjct: 315 NLKELYL 321



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 132/225 (58%), Gaps = 2/225 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL ++ +++LP  + KL +L+EL L GN+L+ LP  I  + NL  L L  N  T
Sbjct: 86  QNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVLP--IAQLQNLEILELFRNQFT 143

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L++L+L  NK+  LP  + +L++L  L L  N+I+ +  D +   NL  
Sbjct: 144 TLPKEITELKNLQILNLFENKIKILPKEISQLSNLIWLDLGKNKIERLSLDFKGFQNLKS 203

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++ DNK+  L  ++ +LK+L  L+L +N  + LP+EI     L  L+L  N+L ++P+ 
Sbjct: 204 LNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEE 263

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
           +G L  L  L +  NRL ++P  +    +L   ++E   L++LP+
Sbjct: 264 IGKLEKLESLFVEGNRLTTLPNGIGHLRNLKILHLEQNRLTTLPE 308



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 127/227 (55%), Gaps = 4/227 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  L+LS + ++ LP  + +L +LE L L+ N+  +LP +I  + NL  L L EN 
Sbjct: 107 KLENLKELNLSGNQLSVLP--IAQLQNLEILELFRNQFTTLPKEITELKNLQILNLFENK 164

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           +  LP  ++ L  L  LDL  NK+  L +      +LK L L  N+++ +  DI  L +L
Sbjct: 165 IKILPKEISQLSNLIWLDLGKNKIERLSLDFKGFQNLKSLNLLDNKLEHLSADIAQLKSL 224

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++  N+ + LP E+ +L+NL  L+L  N L  LP+EIG    L +L ++ N L  +P
Sbjct: 225 EFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEEIGKLEKLESLFVEGNRLTTLP 284

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
           + +G+L NL  L L  NRL ++PE +    +L E  ++    +S P+
Sbjct: 285 NGIGHLRNLKILHLEQNRLTTLPEEMRALQNLKELYLQNS--NSFPE 329



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 126/242 (52%), Gaps = 6/242 (2%)

Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           L +LP+ +  +  ++  + L RN+ TA P     +  ++ ++    N++  IP  I  + 
Sbjct: 29  LETLPEEI-GTFQNLEKLILFRNRLTAIPKE-IGKLRNLETLILAENRLKTIPNEI-EQL 85

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           +NL  +++ +N L++LP  +G    L ELNL  NQ+S L   I  L NLE+L L  N   
Sbjct: 86  QNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVLP--IAQLQNLEILELFRNQFT 143

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
            LP  I  L+ L+ L+L ENK++ LP EI  L  L  L L  N++  L        NL  
Sbjct: 144 TLPKEITELKNLQILNLFENKIKILPKEISQLSNLIWLDLGKNKIERLSLDFKGFQNLKS 203

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPS 559
           L++ +N L+ +  +I  L++L  L LN N     +P E+    NLQ++ L    L+ +P 
Sbjct: 204 LNLLDNKLEHLSADIAQLKSLEFLNLNYNR-FKILPEEILQLENLQVLELTGNQLTSLPE 262

Query: 560 EI 561
           EI
Sbjct: 263 EI 264



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/118 (41%), Positives = 74/118 (62%), Gaps = 1/118 (0%)

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           L  S+ N  +++ LDL   +LE+LP EIG  + L++LIL  N+L ++P+ IG L NL  L
Sbjct: 9   LEKSLQNPSEVRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEIGKLRNLETL 68

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            + EN L++IP EI  L+NL TL L +N  L+N+P  +    NL+ ++L    LS +P
Sbjct: 69  ILAENRLKTIPNEIEQLQNLKTLDLYENK-LSNLPNGIGKLENLKELNLSGNQLSVLP 125



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 83/145 (57%), Gaps = 3/145 (2%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L + +QN   + +L LS+  L+ LP  IG  + L+ L L  N+L ++P EIG L+ L+ L
Sbjct: 9   LEKSLQNPSEVRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEIGKLRNLETL 68

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           IL  N+L ++P  I  L NL  L + EN L ++P  IG LENL  L L+ N  L+ +P  
Sbjct: 69  ILAENRLKTIPNEIEQLQNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQ-LSVLP-- 125

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIV 562
           +A   NL+I+ L     + +P EI 
Sbjct: 126 IAQLQNLEILELFRNQFTTLPKEIT 150


>gi|254415005|ref|ZP_05028768.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
 gi|196178152|gb|EDX73153.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1090

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/374 (33%), Positives = 197/374 (52%), Gaps = 36/374 (9%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE 156
           +   E    LDLS + +T LPP + KLTHL++L L          +  Y       G   
Sbjct: 12  QAAREEWTELDLSGNDLTVLPPDIGKLTHLKKLIL---------GKYQYDDEGDIAGFIG 62

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N L++LP  +  L QL  L +  N+L ELP  + +LTSL+ L L  N+I+ + P+I  L+
Sbjct: 63  NKLSALPREIGQLHQLEELQIALNQLQELPPEILQLTSLQSLNLGCNKIQELPPEIGQLT 122

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ-HNELV 275
           +L  L +R NKI+ELPPE+G+L +L +L+L+ N+++ELP EIG  T L +LDL   N + 
Sbjct: 123 SLQSLDLRYNKIQELPPEIGQLTSLQSLNLSGNNIQELPPEIGQLTALQSLDLSFFNNIQ 182

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            +P  +  L +L  L LS+N+++ +P  + +                        LTS+ 
Sbjct: 183 ELPPQIFQLTSLQSLHLSFNKIQELPAEILQ------------------------LTSLQ 218

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
           ++ LS NK    P+    Q TS+ S++   N+I ++P  I  +  +L  +N+  N +  L
Sbjct: 219 SLHLSFNKIQELPA-EILQLTSLQSLHLSFNKIQELPAEIL-QLTSLQSLNLYSNNIQEL 276

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++     L  LNLG N I +L  +I  L +L+ L L +N +++LP  I  L  LK LD
Sbjct: 277 PPEILQLTSLQSLNLGGNNIQELPPEILQLTSLQSLNLRSNNIQELPPEIRQLPNLKKLD 336

Query: 456 LEENKLESLPNEIG 469
           L  N L   P  +G
Sbjct: 337 LRSNPLPIPPEILG 350



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 183/366 (50%), Gaps = 14/366 (3%)

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           + EN L  L +  A  ++   LDL  N L  LP  + KLT LK L L            Q
Sbjct: 1   MTENELLQLIEQAAR-EEWTELDLSGNDLTVLPPDIGKLTHLKKLILG---------KYQ 50

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
           Y     +     NK+  LP E+G+L  L  L +A N L+ELP EI   T L +L+L  N+
Sbjct: 51  YDDEGDIAGFIGNKLSALPREIGQLHQLEELQIALNQLQELPPEILQLTSLQSLNLGCNK 110

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           +  +P  +G L +L  L L YN+++ +P  + +   L   N+ G  +  LP  +   LT+
Sbjct: 111 IQELPPEIGQLTSLQSLDLRYNKIQELPPEIGQLTSLQSLNLSGNNIQELPPEI-GQLTA 169

Query: 334 INNITLSR-NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
           + ++ LS  N     P     Q TS+ S++   N+I ++P  I  +  +L  +++  N +
Sbjct: 170 LQSLDLSFFNNIQELPPQ-IFQLTSLQSLHLSFNKIQELPAEIL-QLTSLQSLHLSFNKI 227

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
             LP ++     L  L+L  N+I +L  +I  L +L+ L L +N +++LP  I  L  L+
Sbjct: 228 QELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQ 287

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
            L+L  N ++ LP EI  L  LQ L L+SN +  LP  I  L NL  L +  N L   PE
Sbjct: 288 SLNLGGNNIQELPPEILQLTSLQSLNLRSNNIQELPPEIRQLPNLKKLDLRSNPLPIPPE 347

Query: 513 EIGTLE 518
            +G+ E
Sbjct: 348 ILGSKE 353



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 175/344 (50%), Gaps = 17/344 (4%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N +  LPP++G+L +L  L L     ++     G+    +      N+L  +P  
Sbjct: 21  LDLSGNDLTVLPPDIGKLTHLKKLILGKYQYDDE----GDIAGFIG-----NKLSALPRE 71

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC-ALSSLPDGLLSSLTSINNITL 339
           +G L  L  L+++ N+L+ +P  + +   L   N+ GC  +  LP  +   LTS+ ++ L
Sbjct: 72  IGQLHQLEELQIALNQLQELPPEILQLTSLQSLNL-GCNKIQELPPEI-GQLTSLQSLDL 129

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD-NLLTSLPLD 398
             NK    P     Q TS+ S+N   N I ++P  I  +   L  +++   N +  LP  
Sbjct: 130 RYNKIQELPPE-IGQLTSLQSLNLSGNNIQELPPEI-GQLTALQSLDLSFFNNIQELPPQ 187

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +     L  L+L  N+I +L  +I  L +L+ L LS N +++LP+ I  L  L+ L L  
Sbjct: 188 IFQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSF 247

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           NK++ LP EI  L  LQ L L SN +  LP  I  LT+L  L++G NN+Q +P EI  L 
Sbjct: 248 NKIQELPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGNNIQELPPEILQLT 307

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           +L +L L  N  +  +P E+    NL+ + L + PL  IP EI+
Sbjct: 308 SLQSLNLRSNN-IQELPPEIRQLPNLKKLDLRSNPLP-IPPEIL 349



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 113/180 (62%), Gaps = 1/180 (0%)

Query: 105 NLDLSK-SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLP 163
           +LDLS  ++I  LPP + +LT L+ L+L  NK+  LP++I  +T+L  L L+ N +  LP
Sbjct: 172 SLDLSFFNNIQELPPQIFQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELP 231

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
             +  L  L+ L L  NK+ ELP  + +LTSL+ L L  N I+ + P+I  L++L  L++
Sbjct: 232 AEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNL 291

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
             N I+ELPPE+ +L +L +L+L  N+++ELP EI     L  LDL+ N L   P++LG+
Sbjct: 292 GGNNIQELPPEILQLTSLQSLNLRSNNIQELPPEIRQLPNLKKLDLRSNPLPIPPEILGS 351



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 108/197 (54%), Gaps = 14/197 (7%)

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT--------------NQISKLSEDIQNL 425
           +  +++++  N LT LP D+G    L +L LG               N++S L  +I  L
Sbjct: 16  EEWTELDLSGNDLTVLPPDIGKLTHLKKLILGKYQYDDEGDIAGFIGNKLSALPREIGQL 75

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
             LE L ++ N L++LP  I  L  L+ L+L  NK++ LP EIG L  LQ L L+ N++ 
Sbjct: 76  HQLEELQIALNQLQELPPEILQLTSLQSLNLGCNKIQELPPEIGQLTSLQSLDLRYNKIQ 135

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
            LP  IG LT+L  L++  NN+Q +P EIG L  L +L L+    +  +P ++   ++LQ
Sbjct: 136 ELPPEIGQLTSLQSLNLSGNNIQELPPEIGQLTALQSLDLSFFNNIQELPPQIFQLTSLQ 195

Query: 546 IMSLDNCPLSQIPSEIV 562
            + L    + ++P+EI+
Sbjct: 196 SLHLSFNKIQELPAEIL 212


>gi|440909593|gb|ELR59482.1| Leucine-rich repeat-containing protein 1, partial [Bos grunniens
           mutus]
          Length = 516

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 197/390 (50%), Gaps = 28/390 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + +  +D RH  L  +P  VY+   SL+ L L  N+++ +      L  L  L + DN+I
Sbjct: 4   RHVETIDRRHCSLLYVPDEVYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 63

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LPPE+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT
Sbjct: 64  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLT 123

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L ++   L+S+PE +    +L    +    L+ LPD L                     
Sbjct: 124 CLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL--------------------- 162

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
               TQ   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L
Sbjct: 163 ----TQLRRLEELDLGNNEIYNLPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCL 217

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L E+I  L +L  LV+S NLL+ LP  IG L+KL  L +++N+L  LP  +
Sbjct: 218 DVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAV 277

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + L  L+L  N+L++LP++IG L  LS L+   N L S+P+EIG   +L    + DN
Sbjct: 278 GDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDN 337

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L  IP E++  + L ++ +    LS +P
Sbjct: 338 R-LTRIPAEVSRAAELHVLDVAGNRLSHLP 366



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 113/318 (35%), Positives = 167/318 (52%), Gaps = 8/318 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 76  LVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 135

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 136 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 195

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  +PD +G
Sbjct: 196 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIG 255

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE +  C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 256 KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKS-IGKLKKLSNLNADRN 314

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + SRA  L  +++  N L+ LPL L 
Sbjct: 315 KLVSLPKEIGGCCSLT-VFCV--RDNRLTRIPAEV-SRAAELHVLDVAGNRLSHLPLSL- 369

Query: 401 TWVGLTELNLGTNQISKL 418
           T + L  L L  NQ   L
Sbjct: 370 TALNLKALWLSDNQAQPL 387



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 176/375 (46%), Gaps = 79/375 (21%)

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
           +Y  +L  L +  N++RELP +  +L  L  L L+ N ++ LP EI N   LV LD+  N
Sbjct: 25  RYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRN 84

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL--LSS 330
           +   IP+                    +PE++S C  L   +  G  L+ LP+    L +
Sbjct: 85  D---IPE--------------------IPESISFCKALQIADFSGNPLTRLPESFPELQN 121

Query: 331 LT--SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           LT  S+N+I+L            P    ++Y                     NL+ + ++
Sbjct: 122 LTCLSVNDISLQ---------SLPENIGNLY---------------------NLASLELR 151

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
           +NLLT LP  L     L EL+LG N+I  L E I  L++L+ L L  N L +LP  IGNL
Sbjct: 152 ENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNL 211

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
           + L CLD+ EN+LE LP EI  L  L  L++  N L  LP  IG L  LS L V +N L 
Sbjct: 212 KNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLT 271

Query: 509 SIPEEIGTLENLHTLYLNDNTCLN----------------------NIPFELALCSNLQI 546
            +PE +G  E+L  L L +N  L                       ++P E+  C +L +
Sbjct: 272 QLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 331

Query: 547 MSLDNCPLSQIPSEI 561
             + +  L++IP+E+
Sbjct: 332 FCVRDNRLTRIPAEV 346



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 191/405 (47%), Gaps = 28/405 (6%)

Query: 125 HLEELYLYGNKLASLPSQI-GYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLN 183
           H+E +      L  +P ++  Y  +L  L L  N L  LP+    L +LR L L  N++ 
Sbjct: 5   HVETIDRRHCSLLYVPDEVYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 64

Query: 184 ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVT 243
            LP  +     L  L +  N I  +   I +   L +     N +  LP    EL+NL  
Sbjct: 65  RLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTC 124

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L +    L+ LP+ IGN   L +L+L+ N L  +PD L  L  L  L L  N + ++PE+
Sbjct: 125 LSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES 184

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           +   +HL +  ++G  LS LP         I N+                   ++  ++ 
Sbjct: 185 IGALLHLKDLWLDGNQLSELPQ-------EIGNLK------------------NLLCLDV 219

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
             N+++++P  I S   +L+ + +  NLL  LP  +G    L+ L +  N++++L E + 
Sbjct: 220 SENRLERLPEEI-SGLTSLTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAVG 278

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           +  +L  LVL+ N L  LP SIG L+KL  L+ + NKL SLP EIG    L    ++ N+
Sbjct: 279 DCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNR 338

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L  +P  +     L  L V  N L  +P  +  L NL  L+L+DN
Sbjct: 339 LTRIPAEVSRAAELHVLDVAGNRLSHLPLSLTAL-NLKALWLSDN 382



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 191/393 (48%), Gaps = 31/393 (7%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLA 155
           RC   ++  +D    S+ ++P  V +    LEEL L  N+L  LP Q   +  L  LGL+
Sbjct: 1   RCNR-HVETIDRRHCSLLYVPDEVYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLS 59

Query: 156 ENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFN---RIKTVHPDI 212
           +N +  LP  +AN  QL  LD+  N + E+P  +    +L+I     N   R+    P++
Sbjct: 60  DNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPEL 119

Query: 213 QYLS--------------------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLE 252
           Q L+                    NL+ L +R+N +  LP  L +L+ L  LDL +N + 
Sbjct: 120 QNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIY 179

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
            LP+ IG    L  L L  N+L  +P  +GNL NL  L +S NRLE +PE +S    L +
Sbjct: 180 NLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 239

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKI 371
             +    L  LPDG +  L  ++ + + +N+ T  P   G  +  S+  +    N++  +
Sbjct: 240 LVISQNLLEMLPDG-IGKLKKLSILKVDQNRLTQLPEAVGDCE--SLTELVLTENRLLTL 296

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + K LS +N   N L SLP ++G    LT   +  N+++++  ++     L VL
Sbjct: 297 PKSI-GKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSRAAELHVL 355

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
            ++ N L  LP S+  L  LK L L +N+ + L
Sbjct: 356 DVAGNRLSHLPLSLTAL-NLKALWLSDNQAQPL 387


>gi|329664482|ref|NP_001192398.1| leucine-rich repeat-containing protein 1 [Bos taurus]
 gi|296474603|tpg|DAA16718.1| TPA: PDZ-domain protein scribble-like [Bos taurus]
          Length = 524

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 197/390 (50%), Gaps = 28/390 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + +  +D RH  L  +P  VY+   SL+ L L  N+++ +      L  L  L + DN+I
Sbjct: 12  RHVETIDRRHCSLLYVPDEVYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LPPE+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLT 131

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L ++   L+S+PE +    +L    +    L+ LPD L                     
Sbjct: 132 CLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL--------------------- 170

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
               TQ   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L
Sbjct: 171 ----TQLRRLEELDLGNNEIYNLPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCL 225

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L E+I  L +L  LV+S NLL+ LP  IG L+KL  L +++N+L  LP  +
Sbjct: 226 DVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAV 285

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + L  L+L  N+L++LP++IG L  LS L+   N L S+P+EIG   +L    + DN
Sbjct: 286 GDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDN 345

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L  IP E++  + L ++ +    LS +P
Sbjct: 346 R-LTRIPAEVSRAAELHVLDVAGNRLSHLP 374



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 113/318 (35%), Positives = 167/318 (52%), Gaps = 8/318 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 84  LVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  +PD +G
Sbjct: 204 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE +  C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 264 KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKS-IGKLKKLSNLNADRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + SRA  L  +++  N L+ LPL L 
Sbjct: 323 KLVSLPKEIGGCCSLT-VFCV--RDNRLTRIPAEV-SRAAELHVLDVAGNRLSHLPLSL- 377

Query: 401 TWVGLTELNLGTNQISKL 418
           T + L  L L  NQ   L
Sbjct: 378 TALNLKALWLSDNQAQPL 395



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 191/405 (47%), Gaps = 28/405 (6%)

Query: 125 HLEELYLYGNKLASLPSQI-GYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLN 183
           H+E +      L  +P ++  Y  +L  L L  N L  LP+    L +LR L L  N++ 
Sbjct: 13  HVETIDRRHCSLLYVPDEVYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 184 ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVT 243
            LP  +     L  L +  N I  +   I +   L +     N +  LP    EL+NL  
Sbjct: 73  RLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTC 132

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L +    L+ LP+ IGN   L +L+L+ N L  +PD L  L  L  L L  N + ++PE+
Sbjct: 133 LSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES 192

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           +   +HL +  ++G  LS LP         I N+                   ++  ++ 
Sbjct: 193 IGALLHLKDLWLDGNQLSELPQ-------EIGNLK------------------NLLCLDV 227

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
             N+++++P  I S   +L+ + +  NLL  LP  +G    L+ L +  N++++L E + 
Sbjct: 228 SENRLERLPEEI-SGLTSLTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAVG 286

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           +  +L  LVL+ N L  LP SIG L+KL  L+ + NKL SLP EIG    L    ++ N+
Sbjct: 287 DCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNR 346

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L  +P  +     L  L V  N L  +P  +  L NL  L+L+DN
Sbjct: 347 LTRIPAEVSRAAELHVLDVAGNRLSHLPLSLTAL-NLKALWLSDN 390



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 167/349 (47%), Gaps = 56/349 (16%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L ELP++      L  L L  NE+  +P  + N + L  L +S N + 
Sbjct: 36  RSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIP 95

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQ 354
            +PE++S C  L   +  G  L+ LP+    L +LT  S+N+I+L            P  
Sbjct: 96  EIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQ---------SLPEN 146

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
             ++Y                     NL+ + +++NLLT LP  L     L EL+LG N+
Sbjct: 147 IGNLY---------------------NLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           I  L E I  L++L+ L L  N L +LP  IGNL+ L CLD+ EN+LE LP EI  L  L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN-- 532
             L++  N L  LP  IG L  LS L V +N L  +PE +G  E+L  L L +N  L   
Sbjct: 246 TDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLP 305

Query: 533 --------------------NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                               ++P E+  C +L +  + +  L++IP+E+
Sbjct: 306 KSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEV 354



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 189/394 (47%), Gaps = 29/394 (7%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++  +D    S+ ++P  V +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 7   LWRCNR-HVETIDRRHCSLLYVPDEVYRYARSLEELLLDANQLRELPEQFFQLVKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFN---RIKTVHP 210
           L++N +  LP  +AN  QL  LD+  N + E+P  +    +L+I     N   R+    P
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 125

Query: 211 DIQYLS--------------------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
           ++Q L+                    NL+ L +R+N +  LP  L +L+ L  LDL +N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           +  LP+ IG    L  L L  N+L  +P  +GNL NL  L +S NRLE +PE +S    L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK 370
            +  +    L  LPDG +  L  ++ + + +N+ T  P        S+  +    N++  
Sbjct: 246 TDLVISQNLLEMLPDG-IGKLKKLSILKVDQNRLTQLPEAV-GDCESLTELVLTENRLLT 303

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           +P  I  + K LS +N   N L SLP ++G    LT   +  N+++++  ++     L V
Sbjct: 304 LPKSI-GKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSRAAELHV 362

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L ++ N L  LP S+  L  LK L L +N+ + L
Sbjct: 363 LDVAGNRLSHLPLSLTAL-NLKALWLSDNQAQPL 395


>gi|159487945|ref|XP_001701983.1| peptidyl-prolyl cis-trans isomerase, FKBP-type [Chlamydomonas
            reinhardtii]
 gi|158281202|gb|EDP06958.1| peptidyl-prolyl cis-trans isomerase, FKBP-type [Chlamydomonas
            reinhardtii]
          Length = 1784

 Score =  166 bits (421), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 122/398 (30%), Positives = 187/398 (46%), Gaps = 50/398 (12%)

Query: 103  ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
            ++ L +    ++ +PP   +L  LE+L+L  N L +LP ++  + +L  L L  N L +L
Sbjct: 1415 LIELMVDACGVSEVPPEFFQLPDLEKLWLSNNGLRTLPEEVANLRSLDSLWLGSNLLRAL 1474

Query: 163  PDSL-ANLQQLRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            P  L + L  LR L L  N L+  LP  V  +TSL+ L +  N++  V P+I  L +L+ 
Sbjct: 1475 PGGLNSGLSCLRKLWLPANMLSGTLPAEVCAITSLEWLDVSENKLTEVCPEIGQLQSLTR 1534

Query: 221  LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
            L +  N +R LP  +G L  +  L L  N LE LP EIG C+ LV L L  N L  +P  
Sbjct: 1535 LDLHTNMLRGLPATIGLLTRVKHLSLHFNQLESLPGEIGQCSSLVWLSLNANRLTQLPPE 1594

Query: 281  LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
            +GNL N+ RL +  N L S+P  L +                LP         +  ++L 
Sbjct: 1595 IGNLTNIVRLAVHINELHSLPAELGR----------------LP---------LEAVSLF 1629

Query: 341  RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            +NK    P                       P  +   A    ++ + +N L  +P ++G
Sbjct: 1630 KNKLVTLP-----------------------PELLLGLAGTCCRLGLYENELREVPKEIG 1666

Query: 401  TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
                L EL L +NQ++ +  +I  L  L  L L  N L  LP  I  L +L+ L L+ N+
Sbjct: 1667 KLSLLQELWLYSNQLTSVPPEIGELTELRRLWLDRNQLTHLPKEISKLTRLQELYLDNNQ 1726

Query: 461  LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
            L  LP E+  + +L++L L  N  + LP A+  L  L+
Sbjct: 1727 LVELPEELASMTQLRKLYLDGNPNLVLPPAVAALPCLT 1764



 Score =  134 bits (337), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 171/340 (50%), Gaps = 36/340 (10%)

Query: 228  IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN-LIN 286
            + E+PPE  +L +L  L L++N L  LP+E+ N   L +L L  N L  +P  L + L  
Sbjct: 1425 VSEVPPEFFQLPDLEKLWLSNNGLRTLPEEVANLRSLDSLWLGSNLLRALPGGLNSGLSC 1484

Query: 287  LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
            L +L L  N L                  E CA+           TS+  + +S NK T 
Sbjct: 1485 LRKLWLPANMLSGT------------LPAEVCAI-----------TSLEWLDVSENKLTE 1521

Query: 347  Y-PSGGPTQFTSVYSINFEHNQIDKIP--YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
              P  G  Q  S+  ++   N +  +P   G+ +R K+LS   +  N L SLP ++G   
Sbjct: 1522 VCPEIG--QLQSLTRLDLHTNMLRGLPATIGLLTRVKHLS---LHFNQLESLPGEIGQCS 1576

Query: 404  GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
             L  L+L  N++++L  +I NL N+  L +  N L  LP+ +G L  L+ + L +NKL +
Sbjct: 1577 SLVWLSLNANRLTQLPPEIGNLTNIVRLAVHINELHSLPAELGRL-PLEAVSLFKNKLVT 1635

Query: 464  LPNEI--GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            LP E+  G      RL L  N+L  +P+ IG L+ L  L +  N L S+P EIG L  L 
Sbjct: 1636 LPPELLLGLAGTCCRLGLYENELREVPKEIGKLSLLQELWLYSNQLTSVPPEIGELTELR 1695

Query: 522  TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             L+L+ N  L ++P E++  + LQ + LDN  L ++P E+
Sbjct: 1696 RLWLDRNQ-LTHLPKEISKLTRLQELYLDNNQLVELPEEL 1734



 Score =  133 bits (334), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 117/365 (32%), Positives = 181/365 (49%), Gaps = 35/365 (9%)

Query: 182  LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE-LKN 240
            ++E+P   ++L  L+ L+L  N ++T+  ++  L +L  L +  N +R LP  L   L  
Sbjct: 1425 VSEVPPEFFQLPDLEKLWLSNNGLRTLPEEVANLRSLDSLWLGSNLLRALPGGLNSGLSC 1484

Query: 241  LVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLES 299
            L  L L  N L   LP E+   T L  LD+  N+L  +   +G L +LTRL L  N L  
Sbjct: 1485 LRKLWLPANMLSGTLPAEVCAITSLEWLDVSENKLTEVCPEIGQLQSLTRLDLHTNMLRG 1544

Query: 300  VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVY 359
            +P T+                     GLL   T + +++L  N+  + P G   Q +S+ 
Sbjct: 1545 LPATI---------------------GLL---TRVKHLSLHFNQLESLP-GEIGQCSSLV 1579

Query: 360  SINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS 419
             ++   N++ ++P  I     N+ ++ +  N L SLP +LG  + L  ++L  N++  L 
Sbjct: 1580 WLSLNANRLTQLPPEI-GNLTNIVRLAVHINELHSLPAELGR-LPLEAVSLFKNKLVTLP 1637

Query: 420  EDIQNLVNLE----VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
             ++  L+ L      L L  N L+++P  IG L  L+ L L  N+L S+P EIG L EL+
Sbjct: 1638 PEL--LLGLAGTCCRLGLYENELREVPKEIGKLSLLQELWLYSNQLTSVPPEIGELTELR 1695

Query: 476  RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
            RL L  NQL  LP+ I  LT L  L +  N L  +PEE+ ++  L  LYL+ N  L   P
Sbjct: 1696 RLWLDRNQLTHLPKEISKLTRLQELYLDNNQLVELPEELASMTQLRKLYLDGNPNLVLPP 1755

Query: 536  FELAL 540
               AL
Sbjct: 1756 AVAAL 1760



 Score =  128 bits (321), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 105/329 (31%), Positives = 168/329 (51%), Gaps = 15/329 (4%)

Query: 96   LRCKEENILNLD------LSKSSITHLPPSVEK-LTHLEELYLYGNKLA-SLPSQIGYVT 147
            LR   E + NL       L  + +  LP  +   L+ L +L+L  N L+ +LP+++  +T
Sbjct: 1448 LRTLPEEVANLRSLDSLWLGSNLLRALPGGLNSGLSCLRKLWLPANMLSGTLPAEVCAIT 1507

Query: 148  NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
            +L  L ++EN LT +   +  LQ L  LDL  N L  LP  +  LT +K L L FN++++
Sbjct: 1508 SLEWLDVSENKLTEVCPEIGQLQSLTRLDLHTNMLRGLPATIGLLTRVKHLSLHFNQLES 1567

Query: 208  VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
            +  +I   S+L  LS+  N++ +LPPE+G L N+V L +  N L  LP E+G    L  +
Sbjct: 1568 LPGEIGQCSSLVWLSLNANRLTQLPPEIGNLTNIVRLAVHINELHSLPAELGRLP-LEAV 1626

Query: 268  DLQHNELVNIPD--MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
             L  N+LV +P   +LG      RL L  N L  VP+ + K   L E  +    L+S+P 
Sbjct: 1627 SLFKNKLVTLPPELLLGLAGTCCRLGLYENELREVPKEIGKLSLLQELWLYSNQLTSVPP 1686

Query: 326  GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
              +  LT +  + L RN+ T  P    ++ T +  +  ++NQ+ ++P  + S  + L K+
Sbjct: 1687 E-IGELTELRRLWLDRNQLTHLPK-EISKLTRLQELYLDNNQLVELPEELASMTQ-LRKL 1743

Query: 386  NMKDNLLTSLPLDLGTWVGLTE-LNLGTN 413
             +  N    LP  +     LTE  + GTN
Sbjct: 1744 YLDGNPNLVLPPAVAALPCLTESADYGTN 1772



 Score =  106 bits (264), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 87/277 (31%), Positives = 134/277 (48%), Gaps = 28/277 (10%)

Query: 310  LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
            L E  V+ C +S +P      L  +  + LS N     P        S+ S+    N + 
Sbjct: 1415 LIELMVDACGVSEVPPEFFQ-LPDLEKLWLSNNGLRTLPEE-VANLRSLDSLWLGSNLLR 1472

Query: 370  KIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
             +P G+ S    L K+ +  N+L+ +LP ++     L  L++  N+++++  +I  L +L
Sbjct: 1473 ALPGGLNSGLSCLRKLWLPANMLSGTLPAEVCAITSLEWLDVSENKLTEVCPEIGQLQSL 1532

Query: 429  EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
              L L  N+L+ LP++IG L ++K L L  N+LESLP EIG    L  L L +N+L  LP
Sbjct: 1533 TRLDLHTNMLRGLPATIGLLTRVKHLSLHFNQLESLPGEIGQCSSLVWLSLNANRLTQLP 1592

Query: 489  RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN---------------TC--- 530
              IG+LTN+  L+V  N L S+P E+G L  L  + L  N               TC   
Sbjct: 1593 PEIGNLTNIVRLAVHINELHSLPAELGRLP-LEAVSLFKNKLVTLPPELLLGLAGTCCRL 1651

Query: 531  ------LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                  L  +P E+   S LQ + L +  L+ +P EI
Sbjct: 1652 GLYENELREVPKEIGKLSLLQELWLYSNQLTSVPPEI 1688


>gi|89271872|emb|CAJ81921.1| erbb2 interacting protein [Xenopus (Silurana) tropicalis]
          Length = 504

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 199/417 (47%), Gaps = 29/417 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE + +LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTILPASIANLINLRELDVSKNGIQEFP-----------------------ENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    L+ LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G L +L  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIP-GFLGNLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N        G +   S+  +    N I ++P  I    K L+ + + +N L  
Sbjct: 233 TYLDVSKNNIEMV-EDGISGCESLQDLLLSSNAIQQLPESI-GALKKLTTLKVDENQLMY 290

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    + +L+   N+I  L   I +L+ +      +N L +LP  IG  +    L
Sbjct: 291 LPDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVL 350

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
            L  NKLESLP E+G +++L+ + L  N+L +LP +   L  L+ + + +N  QS P
Sbjct: 351 FLHSNKLESLPEEMGDMQKLKVINLSDNRLRNLPFSFTRLQQLTAMWLSDN--QSKP 405



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 191/385 (49%), Gaps = 28/385 (7%)

Query: 175 LDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           LD  H  L ++P  ++    +L+ LYL  N+I+ +   +    +L  LS+ DN +  LP 
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTILPA 86

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
            +  L NL  LD++ N ++E P+ I NC +L  ++   N +  +PD    L+NLT+L L+
Sbjct: 87  SIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLN 146

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              L+ +P    +   L    +    L  LP  + + LT +  + L  N+FT  P     
Sbjct: 147 DAFLDFLPANFGRLTKLQILELRENQLKMLPKTM-NRLTQLERLDLGSNEFTEVPE---- 201

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
                                +  +   L +  M  N LT +P  LG    LT L++  N
Sbjct: 202 ---------------------VLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKN 240

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
            I  + + I    +L+ L+LS+N +++LP SIG L+KL  L ++EN+L  LP+ IG L  
Sbjct: 241 NIEMVEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDENQLMYLPDSIGGLTA 300

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           ++ L    N++ +LP +IGHL  +   +   N L  +P EIGT ++   L+L+ N  L +
Sbjct: 301 IEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVLFLHSNK-LES 359

Query: 534 IPFELALCSNLQIMSLDNCPLSQIP 558
           +P E+     L++++L +  L  +P
Sbjct: 360 LPEEMGDMQKLKVINLSDNRLRNLP 384



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 157/310 (50%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLDFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N++  +   +  L  L+ L +  N I  +   +   ++L  L L+ N +++LP+ IG  
Sbjct: 216 GNKLTYIPGFLGNLKQLTYLDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESIGAL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L TL +  N+L+ +PD +G L  +  L  S+N +E++P ++   + +  F  +   L+
Sbjct: 276 KKLTTLKVDENQLMYLPDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLT 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +  S   + L  NK  + P   G  Q   V  IN   N++  +P+  F+R +
Sbjct: 336 QLPPE-IGTWKSATVLFLHSNKLESLPEEMGDMQKLKV--INLSDNRLRNLPFS-FTRLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 1/203 (0%)

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS 416
           +V S+++ H  ++++P  IF+  K L ++ +  N +  LP  L     L +L+L  N ++
Sbjct: 23  TVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
            L   I NL+NL  L +S N +++ P +I N + L  ++   N +  LP+    L  L +
Sbjct: 83  ILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
           L L    L  LP   G LT L  L + EN L+ +P+ +  L  L  L L  N     +P 
Sbjct: 143 LYLNDAFLDFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE-FTEVPE 201

Query: 537 ELALCSNLQIMSLDNCPLSQIPS 559
            L   S L+   +D   L+ IP 
Sbjct: 202 VLEQLSGLKEFWMDGNKLTYIPG 224


>gi|111307791|gb|AAI21268.1| LOC734027 protein [Xenopus (Silurana) tropicalis]
          Length = 635

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 199/417 (47%), Gaps = 29/417 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE + +LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTILPASIANLINLRELDVSKNGIQEFP-----------------------ENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    L+ LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G L +L  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIP-GFLGNLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N        G +   S+  +    N I ++P  I    K L+ + + +N L  
Sbjct: 233 TYLDVSKNNIEMV-EDGISGCESLQDLLLSSNAIQQLPESI-GALKKLTTLKVDENQLMY 290

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    + +L+   N+I  L   I +L+ +      +N L +LP  IG  +    L
Sbjct: 291 LPDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVL 350

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
            L  NKLESLP E+G +++L+ + L  N+L +LP +   L  L+ + + +N  QS P
Sbjct: 351 FLHSNKLESLPEEMGDMQKLKVINLSDNRLRNLPFSFTRLQQLTAMWLSDN--QSKP 405



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 191/385 (49%), Gaps = 28/385 (7%)

Query: 175 LDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           LD  H  L ++P  ++    +L+ LYL  N+I+ +   +    +L  LS+ DN +  LP 
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTILPA 86

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
            +  L NL  LD++ N ++E P+ I NC +L  ++   N +  +PD    L+NLT+L L+
Sbjct: 87  SIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLN 146

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              L+ +P    +   L    +    L  LP  + + LT +  + L  N+FT  P     
Sbjct: 147 DAFLDFLPANFGRLTKLQILELRENQLKMLPKTM-NRLTQLERLDLGSNEFTEVPE---- 201

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
                                +  +   L +  M  N LT +P  LG    LT L++  N
Sbjct: 202 ---------------------VLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKN 240

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
            I  + + I    +L+ L+LS+N +++LP SIG L+KL  L ++EN+L  LP+ IG L  
Sbjct: 241 NIEMVEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDENQLMYLPDSIGGLTA 300

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           ++ L    N++ +LP +IGHL  +   +   N L  +P EIGT ++   L+L+ N  L +
Sbjct: 301 IEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVLFLHSNK-LES 359

Query: 534 IPFELALCSNLQIMSLDNCPLSQIP 558
           +P E+     L++++L +  L  +P
Sbjct: 360 LPEEMGDMQKLKVINLSDNRLRNLP 384



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 157/310 (50%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLDFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N++  +   +  L  L+ L +  N I  +   +   ++L  L L+ N +++LP+ IG  
Sbjct: 216 GNKLTYIPGFLGNLKQLTYLDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESIGAL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L TL +  N+L+ +PD +G L  +  L  S+N +E++P ++   + +  F  +   L+
Sbjct: 276 KKLTTLKVDENQLMYLPDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLT 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +  S   + L  NK  + P   G  Q   V  IN   N++  +P+  F+R +
Sbjct: 336 QLPPE-IGTWKSATVLFLHSNKLESLPEEMGDMQKLKV--INLSDNRLRNLPFS-FTRLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 1/203 (0%)

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS 416
           +V S+++ H  ++++P  IF+  K L ++ +  N +  LP  L     L +L+L  N ++
Sbjct: 23  TVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
            L   I NL+NL  L +S N +++ P +I N + L  ++   N +  LP+    L  L +
Sbjct: 83  ILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
           L L    L  LP   G LT L  L + EN L+ +P+ +  L  L  L L  N     +P 
Sbjct: 143 LYLNDAFLDFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE-FTEVPE 201

Query: 537 ELALCSNLQIMSLDNCPLSQIPS 559
            L   S L+   +D   L+ IP 
Sbjct: 202 VLEQLSGLKEFWMDGNKLTYIPG 224


>gi|418721889|ref|ZP_13281061.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410741686|gb|EKQ90441.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 351

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/315 (36%), Positives = 183/315 (58%), Gaps = 3/315 (0%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L +R+ K+  LP E+ +LKNL  L L +N L  LPKEIG    L  L L  N+L  
Sbjct: 22  DVRVLDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKEIGLLQNLKILHLYANQLTI 81

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L NL  L L+ N+L ++P+ +    +L   ++    L+ LP  +   L ++ +
Sbjct: 82  LPKEIGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEI-WQLKNLED 140

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + LS N FT  P     +  ++ S+   HNQ+  +P  I  + KNL ++ ++ + L +LP
Sbjct: 141 LDLSGNSFTILPKE-IGRLQNLGSLIMRHNQLKTLPKEI-GQLKNLGELILEHSQLKTLP 198

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  L+L  NQ++ L ++I+ L NL  L   NN L  LP  IG L+ L  LDL
Sbjct: 199 KEIGQLKDLQHLSLRNNQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDL 258

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+L++LP E+G LK L+ L L +NQL +LP+ +G L NL  LS+  N L+++P+E+G 
Sbjct: 259 RNNQLKTLPKEVGQLKNLRELYLSANQLKTLPKEVGQLKNLRDLSLDNNQLETLPKEVGQ 318

Query: 517 LENLHTLYLNDNTCL 531
           L+NL  L+L+ N  L
Sbjct: 319 LKNLRWLFLDANPIL 333



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 123/354 (34%), Positives = 187/354 (52%), Gaps = 29/354 (8%)

Query: 155 AENSLT---SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD 211
           AE S T   +L  +L N   +RVLDLR  KL  LP  +++L +L+ L L  N++ T+  +
Sbjct: 3   AEQSGTYYKALTKALQNPLDVRVLDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKE 62

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
           I  L NL +L +  N++  LP E+G+LKNL  LDL +N L  LPKEIG    L  L L  
Sbjct: 63  IGLLQNLKILHLYANQLTILPKEIGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYA 122

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           N+L  +P  +  L NL  L LS N    +P+ + +  +L    +    L +LP  +    
Sbjct: 123 NQLTVLPKEIWQLKNLEDLDLSGNSFTILPKEIGRLQNLGSLIMRHNQLKTLPKEI---- 178

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
                                 Q  ++  +  EH+Q+  +P  I  + K+L  +++++N 
Sbjct: 179 ---------------------GQLKNLGELILEHSQLKTLPKEI-GQLKDLQHLSLRNNQ 216

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           LT LP ++     L  L+   NQ++ L ++I  L NL  L L NN LK LP  +G L+ L
Sbjct: 217 LTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTLPKEVGQLKNL 276

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
           + L L  N+L++LP E+G LK L+ L L +NQL +LP+ +G L NL +L +  N
Sbjct: 277 RELYLSANQLKTLPKEVGQLKNLRDLSLDNNQLETLPKEVGQLKNLRWLFLDAN 330



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 181/352 (51%), Gaps = 34/352 (9%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL +  +T LP  + +L +L EL L  N+L +LP +IG + NL  L L  N LT LP  
Sbjct: 26  LDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKEIGLLQNLKILHLYANQLTILPKE 85

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L  LDL +N+L  LP  +  L +LKIL+L  N++  +  +I  L NL  L +  
Sbjct: 86  IGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLKNLEDLDLSG 145

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N    LP E+G L+NL +L + HN L+ LPKEIG    L  L L+H++L  +P  +G L 
Sbjct: 146 NSFTILPKEIGRLQNLGSLIMRHNQLKTLPKEIGQLKNLGELILEHSQLKTLPKEIGQLK 205

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNK 343
           +L  L L  N+L  +P+ + +  +L   + +   L+ LP   GLL +L            
Sbjct: 206 DLQHLSLRNNQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLV----------- 254

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
                           +++  +NQ+  +P  +  + KNL ++ +  N L +LP ++G   
Sbjct: 255 ----------------TLDLRNNQLKTLPKEV-GQLKNLRELYLSANQLKTLPKEVGQLK 297

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL--KC 453
            L +L+L  NQ+  L +++  L NL  L L  N +  LP  +  + KL  KC
Sbjct: 298 NLRDLSLDNNQLETLPKEVGQLKNLRWLFLDANPI--LPKKLKRIGKLLPKC 347



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/224 (39%), Positives = 140/224 (62%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL+ + +T LP  +  L +L+ L+LY N+L  LP +I  + NL  L L+ NS T
Sbjct: 90  KNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLKNLEDLDLSGNSFT 149

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L  L +RHN+L  LP  + +L +L  L L  +++KT+  +I  L +L  
Sbjct: 150 ILPKEIGRLQNLGSLIMRHNQLKTLPKEIGQLKNLGELILEHSQLKTLPKEIGQLKDLQH 209

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+R+N++  LP E+ +LKNL+TL   +N L  LPKEIG    LVTLDL++N+L  +P  
Sbjct: 210 LSLRNNQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTLPKE 269

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
           +G L NL  L LS N+L+++P+ + +  +L + +++   L +LP
Sbjct: 270 VGQLKNLRELYLSANQLKTLPKEVGQLKNLRDLSLDNNQLETLP 313



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/313 (33%), Positives = 167/313 (53%), Gaps = 6/313 (1%)

Query: 250 HLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVH 309
           + + L K + N   +  LDL+  +L  +P  +  L NL  LRL  N+L ++P+ +    +
Sbjct: 9   YYKALTKALQNPLDVRVLDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKEIGLLQN 68

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQI 368
           L   ++    L+ LP   +  L ++  + L+ N+ T  P   G  Q   +  ++   NQ+
Sbjct: 69  LKILHLYANQLTILPKE-IGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKI--LHLYANQL 125

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
             +P  I+ + KNL  +++  N  T LP ++G    L  L +  NQ+  L ++I  L NL
Sbjct: 126 TVLPKEIW-QLKNLEDLDLSGNSFTILPKEIGRLQNLGSLIMRHNQLKTLPKEIGQLKNL 184

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
             L+L ++ LK LP  IG L+ L+ L L  N+L  LP EI  LK L  L   +NQL  LP
Sbjct: 185 GELILEHSQLKTLPKEIGQLKDLQHLSLRNNQLTILPKEIEQLKNLLTLSSDNNQLTVLP 244

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMS 548
           + IG L NL  L +  N L+++P+E+G L+NL  LYL+ N  L  +P E+    NL+ +S
Sbjct: 245 KEIGLLQNLVTLDLRNNQLKTLPKEVGQLKNLRELYLSANQ-LKTLPKEVGQLKNLRDLS 303

Query: 549 LDNCPLSQIPSEI 561
           LDN  L  +P E+
Sbjct: 304 LDNNQLETLPKEV 316



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 160/298 (53%), Gaps = 5/298 (1%)

Query: 93  KEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCL 152
           KE  + K  N+  L L  + +T LP  +  L +L+ L+LY N+L  LP +IG + NL  L
Sbjct: 38  KEIWQLK--NLRELRLDNNQLTTLPKEIGLLQNLKILHLYANQLTILPKEIGQLKNLEYL 95

Query: 153 GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
            L  N LT+LP  +  LQ L++L L  N+L  LP  +++L +L+ L L  N    +  +I
Sbjct: 96  DLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLKNLEDLDLSGNSFTILPKEI 155

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L NL  L MR N+++ LP E+G+LKNL  L L H+ L+ LPKEIG    L  L L++N
Sbjct: 156 GRLQNLGSLIMRHNQLKTLPKEIGQLKNLGELILEHSQLKTLPKEIGQLKDLQHLSLRNN 215

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
           +L  +P  +  L NL  L    N+L  +P+ +    +L   ++    L +LP   +  L 
Sbjct: 216 QLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTLPKE-VGQLK 274

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           ++  + LS N+    P     Q  ++  ++ ++NQ++ +P  +  + KNL  + +  N
Sbjct: 275 NLRELYLSANQLKTLPK-EVGQLKNLRDLSLDNNQLETLPKEV-GQLKNLRWLFLDAN 330



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/224 (37%), Positives = 128/224 (57%), Gaps = 8/224 (3%)

Query: 93  KEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCL 152
           KE  + K  N+ +LDLS +S T LP  + +L +L  L +  N+L +LP +IG + NL  L
Sbjct: 130 KEIWQLK--NLEDLDLSGNSFTILPKEIGRLQNLGSLIMRHNQLKTLPKEIGQLKNLGEL 187

Query: 153 GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
            L  + L +LP  +  L+ L+ L LR+N+L  LP  + +L +L  L    N++  +  +I
Sbjct: 188 ILEHSQLKTLPKEIGQLKDLQHLSLRNNQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEI 247

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L NL  L +R+N+++ LP E+G+LKNL  L L+ N L+ LPKE+G    L  L L +N
Sbjct: 248 GLLQNLVTLDLRNNQLKTLPKEVGQLKNLRELYLSANQLKTLPKEVGQLKNLRDLSLDNN 307

Query: 273 ELVNIPDMLGNLINLTRLRLSYN-----RLESVPETLSKC-VHL 310
           +L  +P  +G L NL  L L  N     +L+ + + L KC +H 
Sbjct: 308 QLETLPKEVGQLKNLRWLFLDANPILPKKLKRIGKLLPKCTIHF 351


>gi|242070153|ref|XP_002450353.1| hypothetical protein SORBIDRAFT_05g004115 [Sorghum bicolor]
 gi|241936196|gb|EES09341.1| hypothetical protein SORBIDRAFT_05g004115 [Sorghum bicolor]
          Length = 1032

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 165/467 (35%), Positives = 253/467 (54%), Gaps = 27/467 (5%)

Query: 102 NILNLDLSKSSIT-HLPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSL 159
           N+  L+LS SS++  +P ++  L+ L  LYL+GNKL+  +P ++G +TNL  L L  N+L
Sbjct: 151 NLQALELSNSSLSGDIPTALANLSQLNFLYLFGNKLSGPIPVELGKLTNLQHLDLNNNNL 210

Query: 160 T-SLPDSLANLQQLRVLDLRHNKLNE-LPMVVYKLTSLKILYLRFNRIKT-VHPDIQYLS 216
           + S+P SL NL  +  L L +NK++  +P  +  L  LK ++L  N+I   + P++  L+
Sbjct: 211 SGSIPISLTNLTNMSGLTLYNNKISGPIPHEIGNLVMLKRIHLHMNQIAGPLPPELGNLT 270

Query: 217 NLSMLSMRDNKIRE-LPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNEL 274
            L  LS+R N+I   +P EL +L NL TL LA N +   +P  +GN T L  L L  N +
Sbjct: 271 LLETLSLRQNQITGPVPLELSKLPNLRTLHLAKNQMTGSIPARLGNLTNLAILSLSENSI 330

Query: 275 V-NIPDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALS-SLPDGLLSSL 331
             +IP  +GNL+NL  L L  N++   +P+T      +    +    LS SLP     +L
Sbjct: 331 AGHIPQDIGNLMNLQVLDLYRNQISGPIPKTFGNMKSIQSLYLYFNQLSGSLPQEF-ENL 389

Query: 332 TSINNITLSRNKFTA-YPS----GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
           T+I  + L  N  +   P+     G  +F  V    F+      IP+ +    K+LS+++
Sbjct: 390 TNIALLGLWSNMLSGPLPTNICMSGMLEFIFVGDNMFD----GPIPWSL-KTCKSLSQLD 444

Query: 387 MKDNLLTS-LPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVLS-NNLLKKLPS 443
             DN LT  + L  G +  LT ++L +N++S K+S D      LEVL L+ N L+  +P 
Sbjct: 445 FGDNQLTGDIALHFGVYPQLTVMSLASNRLSGKISSDWGACPQLEVLDLAENKLVGSIPP 504

Query: 444 SIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQLV-SLPRAIGHLTNLSYLS 501
           ++ NL  L+ L L  N L   +P EIG LK L  L L  NQL  S+P  +G L +L YL 
Sbjct: 505 ALTNLSNLRELTLRSNNLSGDIPPEIGNLKGLYSLDLSLNQLSGSIPAQLGKLDSLEYLD 564

Query: 502 VGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIM 547
           +  NNL   IPEE+G   +L +L +N N    N+   +   ++LQI+
Sbjct: 565 ISGNNLSGPIPEELGNCNSLRSLNINSNNFSGNLTGSVGNIASLQIL 611



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 160/332 (48%), Gaps = 33/332 (9%)

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEE-LPKEIGNCTMLVTLDLQHNELV-NIPDMLGN 283
            K+ EL  +   L  L ++DL++N L   +P E+G+ + L  LDL  N LV +IP   G 
Sbjct: 43  GKLGEL--DFSALPFLTSVDLSNNTLHGVIPTEMGSLSALSYLDLTLNHLVGHIPSEFGG 100

Query: 284 LINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
           L +LT+L LS+N L   +P +L     L    +    +S      +  L ++  + LS +
Sbjct: 101 LRSLTQLGLSFNNLTGQIPASLGNLTMLTNLVIHQTLVSGPIPKEIGMLVNLQALELSNS 160

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
             +      PT   ++  +NF +         +F            + L   +P++LG  
Sbjct: 161 SLSGDI---PTALANLSQLNFLY---------LFG-----------NKLSGPIPVELGKL 197

Query: 403 VGLTELNLGTNQIS-KLSEDIQNLVNLEVLVLSNNLLKK-LPSSIGNLRKLKCLDLEENK 460
             L  L+L  N +S  +   + NL N+  L L NN +   +P  IGNL  LK + L  N+
Sbjct: 198 TNLQHLDLNNNNLSGSIPISLTNLTNMSGLTLYNNKISGPIPHEIGNLVMLKRIHLHMNQ 257

Query: 461 LES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTL 517
           +   LP E+G L  L+ L L+ NQ+   +P  +  L NL  L + +N +  SIP  +G L
Sbjct: 258 IAGPLPPELGNLTLLETLSLRQNQITGPVPLELSKLPNLRTLHLAKNQMTGSIPARLGNL 317

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
            NL  L L++N+   +IP ++    NLQ++ L
Sbjct: 318 TNLAILSLSENSIAGHIPQDIGNLMNLQVLDL 349



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 7/193 (3%)

Query: 376 FSRAKNLSKVNMKDNLLTS-LPLDLGTWVGLTELNLGTNQ-ISKLSEDIQNLVNLEVLVL 433
           FS    L+ V++ +N L   +P ++G+   L+ L+L  N  +  +  +   L +L  L L
Sbjct: 50  FSALPFLTSVDLSNNTLHGVIPTEMGSLSALSYLDLTLNHLVGHIPSEFGGLRSLTQLGL 109

Query: 434 S-NNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQLVS-LPRA 490
           S NNL  ++P+S+GNL  L  L + +  +   +P EIG L  LQ L L ++ L   +P A
Sbjct: 110 SFNNLTGQIPASLGNLTMLTNLVIHQTLVSGPIPKEIGMLVNLQALELSNSSLSGDIPTA 169

Query: 491 IGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
           + +L+ L++L +  N L   IP E+G L NL  L LN+N    +IP  L   +N+  ++L
Sbjct: 170 LANLSQLNFLYLFGNKLSGPIPVELGKLTNLQHLDLNNNNLSGSIPISLTNLTNMSGLTL 229

Query: 550 DNCPLSQ-IPSEI 561
            N  +S  IP EI
Sbjct: 230 YNNKISGPIPHEI 242



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 33/229 (14%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNL 149
           I  ++  C +  +L+L  +K  +  +PP++  L++L EL L  N L+  +P +IG +  L
Sbjct: 478 ISSDWGACPQLEVLDLAENKL-VGSIPPALTNLSNLRELTLRSNNLSGDIPPEIGNLKGL 536

Query: 150 TCLGLAENSLT-SLPDSLANLQQLRVLDLRHNKLNE-LPMVVYKLTSLKILYLRFNRIKT 207
             L L+ N L+ S+P  L  L  L  LD+  N L+  +P  +    SL+ L +  N    
Sbjct: 537 YSLDLSLNQLSGSIPAQLGKLDSLEYLDISGNNLSGPIPEELGNCNSLRSLNINSN---- 592

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL-VTLDLAHNHLEE-LPKEIGNCTMLV 265
                             N    L   +G + +L + LD+++N L   LP+++G   ML 
Sbjct: 593 ------------------NFSGNLTGSVGNIASLQILLDVSNNKLYGVLPQQLGKLHMLE 634

Query: 266 TLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNE 312
           +L+L HN+    IP    ++++L  L +SYN LE  +PE L   VH N 
Sbjct: 635 SLNLSHNQFTGSIPPSFTSMVSLLMLDVSYNYLEGPLPEGL---VHQNS 680


>gi|418717491|ref|ZP_13277153.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787088|gb|EKR80823.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 426

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 136/386 (35%), Positives = 213/386 (55%), Gaps = 26/386 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +NI  L+LS S +T LP  + KL +L+ L L  N+L +LP +IG + NL  L L++N L 
Sbjct: 49  QNIRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L L  N+L  +P  + +L +L+ L L  N++ T+  DI+ L  L  
Sbjct: 109 ALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQT 168

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+   +  E+G+L+NL +L L HN L  LPKEIG    L +L L HN+L  +P  
Sbjct: 169 LYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKE 228

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L ++P+ + +  +L +  +    L++LP+  +  L ++  + L 
Sbjct: 229 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQLQNLQKLKLY 287

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL ++++  N LT+LP ++G
Sbjct: 288 ENQLTTLPKE-------------------------IGQLQNLQELDLDGNQLTTLPENIG 322

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L LG NQ++ L ++I  L NLE L L +N L  LP  IG L+KL+ L+L+ N+
Sbjct: 323 QLQRLQTLYLGNNQLNFLPKEIGQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQ 382

Query: 461 LESLPNEIGFLKELQRLILQSNQLVS 486
           L +LP EI  LK L++L L +N L S
Sbjct: 383 LATLPEEIKQLKNLKKLYLHNNPLPS 408



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/342 (35%), Positives = 198/342 (57%), Gaps = 9/342 (2%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LP  + KL +L++L+L  N+L +LP +IG + NL  L L EN LT++P  +  LQ L+ L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           +L HN+L  LP  + +L  L+ LYL  N+  ++  +I  L NL  L +  N++  LP E+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
           G+L+NL +L L HN L  LPKEIG    L  L L++N+L  +P  +G L NL +L L+ N
Sbjct: 207 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
           +L ++PE + +  +L +  +    L++LP   +  L ++  + L  N+ T  P     Q 
Sbjct: 267 KLTTLPEEIGQLQNLQKLKLYENQLTTLPKE-IGQLQNLQELDLDGNQLTTLPE-NIGQL 324

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
             + ++   +NQ++ +P  I  + +NL  ++++ N L +LP ++G    L  LNL  NQ+
Sbjct: 325 QRLQTLYLGNNQLNFLPKEI-GQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQL 383

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPS-SIGNLRKL--KCL 454
           + L E+I+ L NL+ L L NN    LPS  I  +RKL  +C+
Sbjct: 384 ATLPEEIKQLKNLKKLYLHNN---PLPSEKIERIRKLLPQCI 422



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 125/377 (33%), Positives = 199/377 (52%), Gaps = 24/377 (6%)

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           A+    ++ ++L N Q +R+L+L  +KL  LP  + KL +L++L L  N++  +  +I  
Sbjct: 34  AQTYYRNITEALKNPQNIRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGK 93

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL  L +  N++  LP E+G+L+NL  L L  N L  +PKEIG    L  L+L HN+L
Sbjct: 94  LQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQL 153

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+ +  L  L  L L +N+  S+ + + +  +L    ++   L+ LP   +  L ++
Sbjct: 154 ATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKE-IGQLRNL 212

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI------------------- 375
            ++ L  N+    P     Q  ++  ++  +NQ+  +P  I                   
Sbjct: 213 ESLGLDHNQLNVLPK-EIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTL 271

Query: 376 ---FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
                + +NL K+ + +N LT+LP ++G    L EL+L  NQ++ L E+I  L  L+ L 
Sbjct: 272 PEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLY 331

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L NN L  LP  IG L+ L+ LDLE N+L +LP EIG L++LQ L L+ NQL +LP  I 
Sbjct: 332 LGNNQLNFLPKEIGQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIK 391

Query: 493 HLTNLSYLSVGENNLQS 509
            L NL  L +  N L S
Sbjct: 392 QLKNLKKLYLHNNPLPS 408



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 123/332 (37%), Positives = 187/332 (56%), Gaps = 7/332 (2%)

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+G+L+NL  L L+ N L  LP+EIG    L  L L  N+L  IP  +G L NL  L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L++N+L ++PE + +   L    +     +S+   +   L ++ ++ L  N+    P  
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEI-GQLQNLESLGLDHNQLNVLPKE 205

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              Q  ++ S+  +HNQ++ +P  I  + +NL  +++++N LT+LP ++G    L +L L
Sbjct: 206 -IGQLRNLESLGLDHNQLNVLPKEI-GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLL 263

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+++ L E+I  L NL+ L L  N L  LP  IG L+ L+ LDL+ N+L +LP  IG 
Sbjct: 264 NKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQ 323

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L+ LQ L L +NQL  LP+ IG L NL  L +  N L ++P+EIG L+ L TL L  N  
Sbjct: 324 LQRLQTLYLGNNQLNFLPKEIGQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQ- 382

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           L  +P E+    NL+ + L N PL   PSE +
Sbjct: 383 LATLPEEIKQLKNLKKLYLHNNPL---PSEKI 411



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 125/346 (36%), Positives = 191/346 (55%), Gaps = 27/346 (7%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
            N+ +L++  +K+  LP E+G+L+NL  L+L  N L  LPKEIG    L  L L  N+L+
Sbjct: 49  QNIRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            +P+ +G L NL +L+L  N+L ++P+ + +  +L E N+    L++LP+ +        
Sbjct: 109 ALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDI-------- 160

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
                             Q   + ++   HNQ + I   I  + +NL  + +  N L  L
Sbjct: 161 -----------------EQLQRLQTLYLGHNQFNSILKEI-GQLQNLESLGLDHNQLNVL 202

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L  L L  NQ++ L ++I  L NL++L L NN L  LP  IG L+ L+ L 
Sbjct: 203 PKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLL 262

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L +NKL +LP EIG L+ LQ+L L  NQL +LP+ IG L NL  L +  N L ++PE IG
Sbjct: 263 LNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIG 322

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L+ L TLYL +N  LN +P E+    NL+ + L++  L+ +P EI
Sbjct: 323 QLQRLQTLYLGNNQ-LNFLPKEIGQLQNLESLDLEHNQLNALPKEI 367



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 147/309 (47%), Gaps = 50/309 (16%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           NI + L N  N+  L LS ++L ++P  + K  +L   N++   L +LP  +   L ++ 
Sbjct: 40  NITEALKNPQNIRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEI-GKLQNLQ 98

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + LS+N+  A P                             + +NL K+ + +N LT++
Sbjct: 99  QLHLSKNQLMALPEE-------------------------IGQLQNLQKLKLYENQLTAI 133

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L ELNL  NQ++ L EDI+ L  L+ L L +N    +   IG L+ L+ L 
Sbjct: 134 PKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLG 193

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L+ N+L  LP EIG L+ L+ L L  NQL  LP+ IG L NL  L +  N L ++P+EIG
Sbjct: 194 LDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIG 253

Query: 516 -----------------------TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                                   L+NL  L L +N  L  +P E+    NLQ + LD  
Sbjct: 254 QLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGN 312

Query: 553 PLSQIPSEI 561
            L+ +P  I
Sbjct: 313 QLTTLPENI 321


>gi|328773976|gb|EGF84013.1| hypothetical protein BATDEDRAFT_21667 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 485

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 233/457 (50%), Gaps = 30/457 (6%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKL-THLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           K +N+  L++S   +  + P++ K+   L +L  + N+L  +PS I  ++ L  L ++ N
Sbjct: 7   KVDNLSELNISNQQLLEIKPAMLKIHPDLVKLSAHKNQLVDIPSDIVLLSKLQILDISGN 66

Query: 158 SLTSLPDSL-----------------------ANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           ++ + P +L                         L+ L+ LD+ HN++ ELP+ V  L+ 
Sbjct: 67  NINNFPHNLPPSITIINASHNKLFISPLTPKIGMLKNLQRLDISHNQIEELPIEVADLSR 126

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           LK L L  N +  +   +  LS L  L++  N+I E+  + G L  L  L++++N L  +
Sbjct: 127 LKTLELHHNMLTAIPAGVLKLSGLEKLNLSFNRITEIDNQFGMLSLLKNLNVSNNLLVNV 186

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNR-LESVPETLSKCVHLNEF 313
             EIG  T LV L+L  N++  +PD LGNL++L    +  NR L ++P T+S    L + 
Sbjct: 187 SAEIGTLTSLVYLNLASNQITMLPDELGNLLSLEEFYIQDNRFLANIPSTMSNLTMLKKV 246

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           N+    LS+ P  + ++  ++ +  + +N           + T + ++  ++  I +I  
Sbjct: 247 NLGNLKLSTYPSAM-ATWANMTDFVVRQNANITEIPDTIGKLTGLKTLESQNCSI-RILA 304

Query: 374 GIFSRAKNLSKVNMKDNLLTS--LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
               + +NL++++++ N L+S  +P  +  W  +T L LG N    + E+I  L +L  L
Sbjct: 305 DDIGQLRNLTRLDLRKNQLSSFAIPYTITDWKSITHLQLGNNSFEIIPEEICQLYSLIDL 364

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
             S N+L  LP  IG L +L  L L  NK+ESL  EI  LK LQ L ++ N L  LP  I
Sbjct: 365 DFSYNMLVGLPKQIGKLTQLVKLCLNNNKIESLTTEIALLKSLQTLEIRFNALSRLPPEI 424

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G L++L  L + EN L  +P E+  LE + TL L  N
Sbjct: 425 GELSSLLKLDISENQLVDLPPELYLLEGV-TLELKGN 460



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 133/263 (50%), Gaps = 6/263 (2%)

Query: 305 SKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFE 364
           SK  +L+E N+    L  +   +L     +  ++  +N+    PS      + +  ++  
Sbjct: 6   SKVDNLSELNISNQQLLEIKPAMLKIHPDLVKLSAHKNQLVDIPSD-IVLLSKLQILDIS 64

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL--DLGTWVGLTELNLGTNQISKLSEDI 422
            N I+  P+ +     +++ +N   N L   PL   +G    L  L++  NQI +L  ++
Sbjct: 65  GNNINNFPHNL---PPSITIINASHNKLFISPLTPKIGMLKNLQRLDISHNQIEELPIEV 121

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            +L  L+ L L +N+L  +P+ +  L  L+ L+L  N++  + N+ G L  L+ L + +N
Sbjct: 122 ADLSRLKTLELHHNMLTAIPAGVLKLSGLEKLNLSFNRITEIDNQFGMLSLLKNLNVSNN 181

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
            LV++   IG LT+L YL++  N +  +P+E+G L +L   Y+ DN  L NIP  ++  +
Sbjct: 182 LLVNVSAEIGTLTSLVYLNLASNQITMLPDELGNLLSLEEFYIQDNRFLANIPSTMSNLT 241

Query: 543 NLQIMSLDNCPLSQIPSEIVVGG 565
            L+ ++L N  LS  PS +    
Sbjct: 242 MLKKVNLGNLKLSTYPSAMATWA 264



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 1/111 (0%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C+  ++++LD S + +  LP  + KLT L +L L  NK+ SL ++I  + +L  L +  N
Sbjct: 356 CQLYSLIDLDFSYNMLVGLPKQIGKLTQLVKLCLNNNKIESLTTEIALLKSLQTLEIRFN 415

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           +L+ LP  +  L  L  LD+  N+L +LP  +Y L  +  L L+ N    V
Sbjct: 416 ALSRLPPEIGELSSLLKLDISENQLVDLPPELYLLEGVT-LELKGNHFDAV 465


>gi|149731086|ref|XP_001491455.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Equus caballus]
          Length = 561

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 218/431 (50%), Gaps = 33/431 (7%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL--TSLPDSLANLQ 170
           I  +P  +++L ++  LYL  NKL +L  ++G +++L  L L++N L  +SLP  L+ ++
Sbjct: 61  IEEIPRDIQRLKNMRILYLNKNKLRTLCPELGELSSLEGLDLSDNPLLPSSLP-VLSGIR 119

Query: 171 QLRVLDLRHNKLNELPMVVYKL------------------------TSLKILYLRFNRIK 206
            LR L L H  L E+P+V++KL                        T L+ +YL+ N+ +
Sbjct: 120 TLRELRLYHTDLEEIPVVIFKLLHHLELLGLAGNHLKSLPKEIVNETKLREIYLKQNKFE 179

Query: 207 TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
              P++  L NL ++ + +NK+  +P E+  L+ L    +A+N L  LP+ +  C  L  
Sbjct: 180 VFPPELCLLYNLEIIDLDENKLSVIPEEIRNLERLQKFFVAYNSLPCLPESLCQCRQLSV 239

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           LDL HN L  IP  L  L  +T + LS N LE VP  L K   L    +    L SLP  
Sbjct: 240 LDLSHNRLHTIPRALAQLPGMTEVALSGNHLEKVPRLLCKWTSLLLLYLRCTGLRSLPRS 299

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
               L  +  + LS+N     P         +  +  + N+I ++P   FS    L  + 
Sbjct: 300 -FRRLVHLRFLDLSQNHLVHCPLPI-CALKDLEILALDDNKIWQLPPD-FSSLSKLKMLG 356

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS---EDIQNLVNLEVLVLSNNLLKKLPS 443
           +  N   S P ++ +   L +L +G +Q +KL+   E I+ L +L+ L + NN L+ LP 
Sbjct: 357 LTGNQFFSFPEEILSLESLEKLYIGQDQGTKLTSMPESIRRLQSLKELHIENNHLQYLPV 416

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
           S+G++  LK LD   N L+ LP+ I   + L+ L+L+ N L  +P  +  L NL  L++ 
Sbjct: 417 SLGSMPNLKILDCRHNLLKQLPDAICQAQALKELLLEDNLLTCIPENLDSLANLKTLTLT 476

Query: 504 ENNLQSIPEEI 514
           +N ++  P+E+
Sbjct: 477 DNPMEDPPKEV 487



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 177/384 (46%), Gaps = 55/384 (14%)

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N+I+ +  DIQ L N+ +L +  NK+R L PELGEL +L  LDL+ N L  LP  +    
Sbjct: 59  NQIEEIPRDIQRLKNMRILYLNKNKLRTLCPELGELSSLEGLDLSDNPL--LPSSLP--- 113

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV-EGCALS 321
                            +L  +  L  LRL +  LE +P  + K +H  E     G  L 
Sbjct: 114 -----------------VLSGIRTLRELRLYHTDLEEIPVVIFKLLHHLELLGLAGNHLK 156

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYS---INFEHNQIDKIPYGI--- 375
           SLP  +++  T +  I L +NKF  +P     +   +Y+   I+ + N++  IP  I   
Sbjct: 157 SLPKEIVNE-TKLREIYLKQNKFEVFPP----ELCLLYNLEIIDLDENKLSVIPEEIRNL 211

Query: 376 -------------------FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS 416
                                + + LS +++  N L ++P  L    G+TE+ L  N + 
Sbjct: 212 ERLQKFFVAYNSLPCLPESLCQCRQLSVLDLSHNRLHTIPRALAQLPGMTEVALSGNHLE 271

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
           K+   +    +L +L L    L+ LP S   L  L+ LDL +N L   P  I  LK+L+ 
Sbjct: 272 KVPRLLCKWTSLLLLYLRCTGLRSLPRSFRRLVHLRFLDLSQNHLVHCPLPICALKDLEI 331

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL--NDNTCLNNI 534
           L L  N++  LP     L+ L  L +  N   S PEEI +LE+L  LY+  +  T L ++
Sbjct: 332 LALDDNKIWQLPPDFSSLSKLKMLGLTGNQFFSFPEEILSLESLEKLYIGQDQGTKLTSM 391

Query: 535 PFELALCSNLQIMSLDNCPLSQIP 558
           P  +    +L+ + ++N  L  +P
Sbjct: 392 PESIRRLQSLKELHIENNHLQYLP 415



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 144/308 (46%), Gaps = 15/308 (4%)

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P++  + T    +D  +  L  IP  +  L  L  + L  N++E +P  + +  ++    
Sbjct: 21  PQQASDRTFF--MDASNQSLATIPSEILELQELEEVHLENNQIEEIPRDIQRLKNMRILY 78

Query: 315 VEGCALSSL-PDGLLSSLTSINNITLSRNKFTAYPSGGP--TQFTSVYSINFEHNQIDKI 371
           +    L +L P+  L  L+S+  + LS N     PS  P  +   ++  +   H  +++I
Sbjct: 79  LNKNKLRTLCPE--LGELSSLEGLDLSDNPL--LPSSLPVLSGIRTLRELRLYHTDLEEI 134

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  IF    +L  + +  N L SLP ++     L E+ L  N+      ++  L NLE++
Sbjct: 135 PVVIFKLLHHLELLGLAGNHLKSLPKEIVNETKLREIYLKQNKFEVFPPELCLLYNLEII 194

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  +P  I NL +L+   +  N L  LP  +   ++L  L L  N+L ++PRA+
Sbjct: 195 DLDENKLSVIPEEIRNLERLQKFFVAYNSLPCLPESLCQCRQLSVLDLSHNRLHTIPRAL 254

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLD- 550
             L  ++ +++  N+L+ +P  +    +L  LYL   T L ++P       +L+ + L  
Sbjct: 255 AQLPGMTEVALSGNHLEKVPRLLCKWTSLLLLYLR-CTGLRSLPRSFRRLVHLRFLDLSQ 313

Query: 551 ----NCPL 554
               +CPL
Sbjct: 314 NHLVHCPL 321


>gi|92097612|gb|AAI15016.1| ERBB2IP protein [Homo sapiens]
          Length = 1367

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 210/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP      T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFDRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++   L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ +  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMVEEGI-STCENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L+++E L  S N ++ LPSSIG L  L+  
Sbjct: 268 LPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FDRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   +NL+  + D+  L Q+P EI
Sbjct: 308 FNE-VEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 159/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
               +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFDRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 ANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G LI++  L  S+N +E++P ++ +  +L  F  +   L 
Sbjct: 276 KNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|417785509|ref|ZP_12433213.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409951374|gb|EKO05889.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 426

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 135/386 (34%), Positives = 212/386 (54%), Gaps = 26/386 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS S +T LP  + KL +L+ L L  N+L +LP +IG + NL  L L++N L 
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L L  N+L  +P  + KL +L+ L L  N++ T+  DI+ L  L  
Sbjct: 109 ALPEEIGQLQNLQKLKLYENQLTAIPKEIGKLQNLQELNLAHNQLATLPEDIEQLQRLQT 168

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+   +  E+G+L+NL +L L HN L  LPKEIG    L +L L HN+L  +P  
Sbjct: 169 LYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKE 228

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L ++P+ + +  +L +  +    L++LP+  +  L ++  + L 
Sbjct: 229 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQLQNLQKLKLY 287

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL ++++  N LT+LP ++G
Sbjct: 288 ENQLTTLPKE-------------------------IGQLQNLQELDLDGNQLTTLPENIG 322

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L LG NQ++ L   ++ L NLE L L +N L  LP  IG L+KL+ L+L+ N+
Sbjct: 323 QLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQ 382

Query: 461 LESLPNEIGFLKELQRLILQSNQLVS 486
           L +LP EI  LK L++L L +N L S
Sbjct: 383 LATLPEEIKQLKNLKKLYLHNNPLPS 408



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 188/360 (52%), Gaps = 53/360 (14%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LP  + KL +L++L+L  N+L +LP +IG + NL  L L EN LT++P  +  LQ L+ L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGKLQNLQEL 146

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           +L HN+L  LP  + +L  L+ LYL  N+  ++  +I  L NL  L +  N++  LP E+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI------------------ 277
           G+L+NL +L L HN L  LPKEIG    L  L L++N+L  +                  
Sbjct: 207 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 278 -----PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
                P+ +G L NL +L+L  N+L ++P+ + +  +L E +++G  L++LP+  +  L 
Sbjct: 267 KLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPEN-IGQLQ 325

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            +  + L  N+    P+    Q  ++ S++ EHNQ                        L
Sbjct: 326 RLQTLYLGNNQLNFLPN-KVEQLQNLESLDLEHNQ------------------------L 360

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS-SIGNLRKL 451
            +LP ++G    L  LNL  NQ++ L E+I+ L NL+ L L NN    LPS  I  +RKL
Sbjct: 361 NALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN---PLPSEKIERIRKL 417



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 134/381 (35%), Positives = 205/381 (53%), Gaps = 26/381 (6%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L G+KL +LP +IG + NL  L L +N L +LP  +  LQ L+ L L  N+L  LP  
Sbjct: 54  LNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMALPEE 113

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +L+ L L  N++  +  +I  L NL  L++  N++  LP ++ +L+ L TL L H
Sbjct: 114 IGQLQNLQKLKLYENQLTAIPKEIGKLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 173

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N    + KEIG    L +L L HN+L  +P  +G L NL  L L +N+L  +P+ + +  
Sbjct: 174 NQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQ 233

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L   ++    L++LP  +   L ++  + L++NK T  P                    
Sbjct: 234 NLQILHLRNNQLTTLPKEI-GQLQNLQKLLLNKNKLTTLPEE------------------ 274

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
                    + +NL K+ + +N LT+LP ++G    L EL+L  NQ++ L E+I  L  L
Sbjct: 275 -------IGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRL 327

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L L NN L  LP+ +  L+ L+ LDLE N+L +LP EIG L++LQ L L+ NQL +LP
Sbjct: 328 QTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLP 387

Query: 489 RAIGHLTNLSYLSVGENNLQS 509
             I  L NL  L +  N L S
Sbjct: 388 EEIKQLKNLKKLYLHNNPLPS 408



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 208/397 (52%), Gaps = 49/397 (12%)

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           A+    ++ + L N Q +R+L+L  +KL  LP  + KL +L++L L  N++  +  +I  
Sbjct: 34  AQTYYRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGK 93

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL  L +  N++  LP E+G+L+NL  L L  N L  +PKEIG    L  L+L HN+L
Sbjct: 94  LQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGKLQNLQELNLAHNQL 153

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+ +  L  L  L L +N+  S+ + + +  +L    ++   L+ LP  +       
Sbjct: 154 ATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI------- 206

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                              Q  ++ S+  +HNQ++ +P  I  + +NL  +++++N LT+
Sbjct: 207 ------------------GQLRNLESLGLDHNQLNVLPKEI-GQLQNLQILHLRNNQLTT 247

Query: 395 LPLDLGTW-------------------VG----LTELNLGTNQISKLSEDIQNLVNLEVL 431
           LP ++G                     +G    L +L L  NQ++ L ++I  L NL+ L
Sbjct: 248 LPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQEL 307

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  LP +IG L++L+ L L  N+L  LPN++  L+ L+ L L+ NQL +LP+ I
Sbjct: 308 DLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEI 367

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G L  L  L++  N L ++PEEI  L+NL  LYL++N
Sbjct: 368 GKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 125/346 (36%), Positives = 191/346 (55%), Gaps = 27/346 (7%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
            N+ +L++  +K+  LP E+G+L+NL  L+L  N L  LPKEIG    L  L L  N+L+
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            +P+ +G L NL +L+L  N+L ++P+ + K  +L E N+    L++LP+ +        
Sbjct: 109 ALPEEIGQLQNLQKLKLYENQLTAIPKEIGKLQNLQELNLAHNQLATLPEDI-------- 160

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
                             Q   + ++   HNQ + I   I  + +NL  + +  N L  L
Sbjct: 161 -----------------EQLQRLQTLYLGHNQFNSILKEI-GQLQNLESLGLDHNQLNVL 202

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L  L L  NQ++ L ++I  L NL++L L NN L  LP  IG L+ L+ L 
Sbjct: 203 PKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLL 262

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L +NKL +LP EIG L+ LQ+L L  NQL +LP+ IG L NL  L +  N L ++PE IG
Sbjct: 263 LNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIG 322

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L+ L TLYL +N  LN +P ++    NL+ + L++  L+ +P EI
Sbjct: 323 QLQRLQTLYLGNNQ-LNFLPNKVEQLQNLESLDLEHNQLNALPKEI 367



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 148/309 (47%), Gaps = 50/309 (16%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           NI ++L N  N+  L LS ++L ++P  + K  +L   N++   L +LP  +   L ++ 
Sbjct: 40  NITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEI-GKLQNLQ 98

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + LS+N+  A P                             + +NL K+ + +N LT++
Sbjct: 99  QLHLSKNQLMALPEE-------------------------IGQLQNLQKLKLYENQLTAI 133

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L ELNL  NQ++ L EDI+ L  L+ L L +N    +   IG L+ L+ L 
Sbjct: 134 PKEIGKLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLG 193

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L+ N+L  LP EIG L+ L+ L L  NQL  LP+ IG L NL  L +  N L ++P+EIG
Sbjct: 194 LDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIG 253

Query: 516 -----------------------TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                                   L+NL  L L +N  L  +P E+    NLQ + LD  
Sbjct: 254 QLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGN 312

Query: 553 PLSQIPSEI 561
            L+ +P  I
Sbjct: 313 QLTTLPENI 321


>gi|157128242|ref|XP_001661361.1| LAP4 protein (Scribble protein) (Smell-impaired protein) [Aedes
           aegypti]
 gi|108882248|gb|EAT46473.1| AAEL002336-PA, partial [Aedes aegypti]
          Length = 626

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 188/364 (51%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+ L    N +  LP+    + NLT LGL + SLT
Sbjct: 30  ENLVELDVSRNDIGDIPDDIKHLRSLQILDFSSNPIHRLPAGFSQLRNLTILGLNDMSLT 89

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP     L +L  L+LR N L  LP  + +LT+L+ L L  N I+ + P + YL  L  
Sbjct: 90  SLPQDFGCLSKLESLELRENLLKHLPESISQLTNLERLDLGDNEIEELPPHLGYLPALQE 149

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++++LPPE+G LKNLV LD++ N +EELP+EIG    L  L L  N L  +PD 
Sbjct: 150 LWLDHNQLQKLPPEIGLLKNLVCLDVSENRMEELPEEIGGLENLTDLHLSQNLLEVLPDG 209

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL ++ E + +CV++ E  +    L+ LP   + ++T +NN+ + 
Sbjct: 210 ISKLTKLTILKLDQNRLHTLNENIGQCVNMQELILTENFLNELP-YTIGNMTMLNNLNVD 268

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN   + PS                              KNL  +++++N LT LP +LG
Sbjct: 269 RNSLISVPSE-------------------------LGNCKNLGVLSLRENKLTKLPSELG 303

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
                                  N + L VL +S N L+ LP S+ NL +LK + L EN+
Sbjct: 304 -----------------------NCLELHVLDVSGNRLQHLPYSLVNL-QLKAVWLSENQ 339

Query: 461 LESL 464
            + L
Sbjct: 340 AQPL 343



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 184/377 (48%), Gaps = 50/377 (13%)

Query: 152 LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD 211
           LGL++N +  LP  + N + L  LD+  N + ++P  +  L SL+IL    N I  +   
Sbjct: 12  LGLSDNEIIKLPSDIQNFENLVELDVSRNDIGDIPDDIKHLRSLQILDFSSNPIHRLPAG 71

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
              L NL++L + D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  
Sbjct: 72  FSQLRNLTILGLNDMSLTSLPQDFGCLSKLESLELRENLLKHLPESISQLTNLERLDLGD 131

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           NE+  +P  LG L  L  L L +N+L+ +P  +                     GLL +L
Sbjct: 132 NEIEELPPHLGYLPALQELWLDHNQLQKLPPEI---------------------GLLKNL 170

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
             ++                              N+++++P  I    +NL+ +++  NL
Sbjct: 171 VCLD---------------------------VSENRMEELPEEI-GGLENLTDLHLSQNL 202

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           L  LP  +     LT L L  N++  L+E+I   VN++ L+L+ N L +LP +IGN+  L
Sbjct: 203 LEVLPDGISKLTKLTILKLDQNRLHTLNENIGQCVNMQELILTENFLNELPYTIGNMTML 262

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
             L+++ N L S+P+E+G  K L  L L+ N+L  LP  +G+   L  L V  N LQ +P
Sbjct: 263 NNLNVDRNSLISVPSELGNCKNLGVLSLRENKLTKLPSELGNCLELHVLDVSGNRLQHLP 322

Query: 512 EEIGTLENLHTLYLNDN 528
             +  L+ L  ++L++N
Sbjct: 323 YSLVNLQ-LKAVWLSEN 338



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 154/336 (45%), Gaps = 51/336 (15%)

Query: 264 LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSL 323
           L  L L  NE++ +P  + N  NL  L +S N +  +P+ +     L   +     +  L
Sbjct: 9   LRKLGLSDNEIIKLPSDIQNFENLVELDVSRNDIGDIPDDIKHLRSLQILDFSSNPIHRL 68

Query: 324 PDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
           P G  S L ++  + L+    T+ P                        +G  S+   L 
Sbjct: 69  PAGF-SQLRNLTILGLNDMSLTSLPQD----------------------FGCLSK---LE 102

Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
            + +++NLL  LP  +     L  L+LG N+I +L   +  L  L+ L L +N L+KLP 
Sbjct: 103 SLELRENLLKHLPESISQLTNLERLDLGDNEIEELPPHLGYLPALQELWLDHNQLQKLPP 162

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
            IG L+ L CLD+ EN++E LP EIG L+ L  L L  N L  LP  I  LT L+ L + 
Sbjct: 163 EIGLLKNLVCLDVSENRMEELPEEIGGLENLTDLHLSQNLLEVLPDGISKLTKLTILKLD 222

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDN------------TCLNN----------IPFELALC 541
           +N L ++ E IG   N+  L L +N            T LNN          +P EL  C
Sbjct: 223 QNRLHTLNENIGQCVNMQELILTENFLNELPYTIGNMTMLNNLNVDRNSLISVPSELGNC 282

Query: 542 SNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQG 577
            NL ++SL    L+++PSE+   G  L +  L + G
Sbjct: 283 KNLGVLSLRENKLTKLPSEL---GNCLELHVLDVSG 315



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/271 (33%), Positives = 126/271 (46%), Gaps = 53/271 (19%)

Query: 283 NLINLTRLR---LSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
           N   L RLR   LS N +  +P  +    +L E +V    +  +PD +            
Sbjct: 2   NFFRLHRLRKLGLSDNEIIKLPSDIQNFENLVELDVSRNDIGDIPDDI------------ 49

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
                            S+  ++F  N I ++P G FS+ +NL+ + + D  LTSLP D 
Sbjct: 50  -------------KHLRSLQILDFSSNPIHRLPAG-FSQLRNLTILGLNDMSLTSLPQDF 95

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G                        L  LE L L  NLLK LP SI  L  L+ LDL +N
Sbjct: 96  GC-----------------------LSKLESLELRENLLKHLPESISQLTNLERLDLGDN 132

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           ++E LP  +G+L  LQ L L  NQL  LP  IG L NL  L V EN ++ +PEEIG LEN
Sbjct: 133 EIEELPPHLGYLPALQELWLDHNQLQKLPPEIGLLKNLVCLDVSENRMEELPEEIGGLEN 192

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLD 550
           L  L+L+ N  L  +P  ++  + L I+ LD
Sbjct: 193 LTDLHLSQNL-LEVLPDGISKLTKLTILKLD 222



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 106/190 (55%), Gaps = 3/190 (1%)

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
           F R   L K+ + DN +  LP D+  +  L EL++  N I  + +DI++L +L++L  S+
Sbjct: 3   FFRLHRLRKLGLSDNEIIKLPSDIQNFENLVELDVSRNDIGDIPDDIKHLRSLQILDFSS 62

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N + +LP+    LR L  L L +  L SLP + G L +L+ L L+ N L  LP +I  LT
Sbjct: 63  NPIHRLPAGFSQLRNLTILGLNDMSLTSLPQDFGCLSKLESLELRENLLKHLPESISQLT 122

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           NL  L +G+N ++ +P  +G L  L  L+L+ N  L  +P E+ L  NL  + +    + 
Sbjct: 123 NLERLDLGDNEIEELPPHLGYLPALQELWLDHNQ-LQKLPPEIGLLKNLVCLDVSENRME 181

Query: 556 QIPSEIVVGG 565
           ++P EI  GG
Sbjct: 182 ELPEEI--GG 189


>gi|357115982|ref|XP_003559764.1| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase At1g35710-like [Brachypodium distachyon]
          Length = 1232

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 164/465 (35%), Positives = 253/465 (54%), Gaps = 23/465 (4%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLT-SLPDSLANLQQLR 173
           +P  + K++HL EL    N L   +P +IG++ +L+ L L++N+L+ S+P ++++L +L 
Sbjct: 97  IPREIGKMSHLVELNFSCNHLVGPIPPEIGHLKHLSILDLSKNNLSNSIPTNMSDLTKLT 156

Query: 174 VLDLRHNKLNE-LPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSMLSMRDNKIR-E 230
           +L L  N+L+  +P+ +  L +L+ L L  N I    P ++  L+NL  L +  N++   
Sbjct: 157 ILYLDQNQLSGYIPIGLGYLMNLEYLALSNNFITGPIPTNLSNLTNLVGLYIWHNRLSGH 216

Query: 231 LPPELGELKNLVTLDLAHNHLEE-LPKEIGNCTMLVTLDLQHNELV-NIPDMLGNLINLT 288
           +P ELG L N+  L+L+ N L   +P  +GN T L  L L  N+L  ++P  +G L +L 
Sbjct: 217 IPQELGHLVNIKYLELSENTLTGPIPNSLGNLTKLTWLFLHRNQLSGDLPQEVGYLADLE 276

Query: 289 RLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT-- 345
           RL L  N L  S+P        L   ++ G  L       +  L ++  + L  N  T  
Sbjct: 277 RLMLHTNNLTGSIPSIFGNLSKLITLHLYGNKLHGWIPREVGYLVNLEELALENNTLTNI 336

Query: 346 -AYPSGGPTQFTSVYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTW 402
             Y  G  T+ T +Y  N   NQI   IP+ +     NL ++ +++N LT S+P  LG  
Sbjct: 337 IPYSLGNLTKLTKLYLYN---NQICGPIPHEL-GYLINLEEMALENNTLTGSIPYTLGNL 392

Query: 403 VGLTELNLGTNQISK-LSEDIQNLVNLEVLVL-SNNLLKKLPSSIGNLRKLKCLDLEENK 460
             LT LNL  NQ+S+ +  ++ NLVNLE L++  N L   +P S+GNL KL  L L  N+
Sbjct: 393 TKLTTLNLFENQLSQDIPRELGNLVNLETLMIYGNTLTGSIPDSLGNLTKLSTLYLHHNQ 452

Query: 461 LES-LPNEIGFLKELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTL 517
           L   LPN++G L  L+ L L  N+L+ S+P  +G+LT L+ L +  N L  SIP+E+G L
Sbjct: 453 LSGHLPNDLGTLINLEDLRLSYNRLIGSIPNILGNLTKLTTLYLVSNQLSASIPKELGKL 512

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS-QIPSEI 561
            NL  L L++NT   +IP  L   + L  + L    LS  IP EI
Sbjct: 513 ANLEGLILSENTLSGSIPNSLGNLTKLITLYLVQNQLSGSIPQEI 557



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 167/512 (32%), Positives = 247/512 (48%), Gaps = 69/512 (13%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTSL-PDSLANLQQLR 173
           +P     L+ L  L+LYGNKL   +P ++GY+ NL  L L  N+LT++ P SL NL +L 
Sbjct: 289 IPSIFGNLSKLITLHLYGNKLHGWIPREVGYLVNLEELALENNTLTNIIPYSLGNLTKLT 348

Query: 174 VLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSMLSMRDNKI-RE 230
            L L +N++   +P  +  L +L+ + L  N +    P  +  L+ L+ L++ +N++ ++
Sbjct: 349 KLYLYNNQICGPIPHELGYLINLEEMALENNTLTGSIPYTLGNLTKLTTLNLFENQLSQD 408

Query: 231 LPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELV-NIPDMLGNLINLT 288
           +P ELG L NL TL +  N L   +P  +GN T L TL L HN+L  ++P+ LG LINL 
Sbjct: 409 IPRELGNLVNLETLMIYGNTLTGSIPDSLGNLTKLSTLYLHHNQLSGHLPNDLGTLINLE 468

Query: 289 RLRLSYNRL-ESVPETLSKCVHLNEF-------------------NVEGCALS------S 322
            LRLSYNRL  S+P  L     L                      N+EG  LS      S
Sbjct: 469 DLRLSYNRLIGSIPNILGNLTKLTTLYLVSNQLSASIPKELGKLANLEGLILSENTLSGS 528

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI-PYGIFSRA-- 379
           +P+ L  +LT +  + L +N+ +       ++  S+  +   +N +  + P G+ +    
Sbjct: 529 IPNSL-GNLTKLITLYLVQNQLSGSIPQEISKLMSLVELELSYNNLSGVLPSGLCAGGLL 587

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI------------------------ 415
           KN +     +NL   LP  L +   L  L L  NQ+                        
Sbjct: 588 KNFTAAG--NNLTGPLPSSLLSCTSLVRLRLDGNQLEGDIGEMEVYPDLVYIDISSNKLS 645

Query: 416 SKLSEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKE 473
            +LS        L +L  S NN+   +P SIG L  L+ LD+  NKLE  +P EIG +  
Sbjct: 646 GQLSHRWGECSKLTLLRASKNNIAGGIPPSIGKLSDLRKLDVSSNKLEGQMPREIGNISM 705

Query: 474 LQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCL 531
           L +L+L  N L   +P+ IG LTNL +L +  NNL   IP  I     L  L LN N   
Sbjct: 706 LFKLVLCGNLLHGNIPQEIGSLTNLEHLDLSSNNLTGPIPRSIEHCLKLQFLKLNHNHLD 765

Query: 532 NNIPFELALCSNLQIMS--LDNCPLSQIPSEI 561
             IP EL +  +LQI+    DN     IPS++
Sbjct: 766 GTIPMELGMLVDLQILVDLGDNLFDGTIPSQL 797



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 144/432 (33%), Positives = 223/432 (51%), Gaps = 16/432 (3%)

Query: 145 YVTNLTCLGLAENSLT-SLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRF 202
           +++ L  L L+ N L  S+P S+  L +LR L LR N++   +P  +  L  L+ L L  
Sbjct: 31  FLSTLRSLDLSNNELVGSIPSSIEVLVKLRALLLRGNQIRGSIPPALANLVKLRFLVLSD 90

Query: 203 NRIKTVHP-DIQYLSNLSMLSMRDNK-IRELPPELGELKNLVTLDLAHNHLE-ELPKEIG 259
           N++    P +I  +S+L  L+   N  +  +PPE+G LK+L  LDL+ N+L   +P  + 
Sbjct: 91  NQVSGEIPREIGKMSHLVELNFSCNHLVGPIPPEIGHLKHLSILDLSKNNLSNSIPTNMS 150

Query: 260 NCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEG 317
           + T L  L L  N+L   IP  LG L+NL  L LS N +   +P  LS   +L    +  
Sbjct: 151 DLTKLTILYLDQNQLSGYIPIGLGYLMNLEYLALSNNFITGPIPTNLSNLTNLVGLYIWH 210

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID-KIPYGIF 376
             LS      L  L +I  + LS N  T          T +  +    NQ+   +P  + 
Sbjct: 211 NRLSGHIPQELGHLVNIKYLELSENTLTGPIPNSLGNLTKLTWLFLHRNQLSGDLPQEVG 270

Query: 377 SRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQI-SKLSEDIQNLVNLEVLVLS 434
             A +L ++ +  N LT S+P   G    L  L+L  N++   +  ++  LVNLE L L 
Sbjct: 271 YLA-DLERLMLHTNNLTGSIPSIFGNLSKLITLHLYGNKLHGWIPREVGYLVNLEELALE 329

Query: 435 NNLLKK-LPSSIGNLRKLKCLDLEENKL-ESLPNEIGFLKELQRLILQSNQLV-SLPRAI 491
           NN L   +P S+GNL KL  L L  N++   +P+E+G+L  L+ + L++N L  S+P  +
Sbjct: 330 NNTLTNIIPYSLGNLTKLTKLYLYNNQICGPIPHELGYLINLEEMALENNTLTGSIPYTL 389

Query: 492 GHLTNLSYLSVGENNL-QSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLD 550
           G+LT L+ L++ EN L Q IP E+G L NL TL +  NT   +IP  L   + L  + L 
Sbjct: 390 GNLTKLTTLNLFENQLSQDIPRELGNLVNLETLMIYGNTLTGSIPDSLGNLTKLSTLYLH 449

Query: 551 NCPLS-QIPSEI 561
           +  LS  +P+++
Sbjct: 450 HNQLSGHLPNDL 461



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 147/439 (33%), Positives = 225/439 (51%), Gaps = 24/439 (5%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLT-SLPDSLANLQQLR 173
           +P ++  LT L  L L+ N+L+  +P ++G + NL  L +  N+LT S+PDSL NL +L 
Sbjct: 385 IPYTLGNLTKLTTLNLFENQLSQDIPRELGNLVNLETLMIYGNTLTGSIPDSLGNLTKLS 444

Query: 174 VLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDI-QYLSNLSMLSMRDNKI-RE 230
            L L HN+L   LP  +  L +L+ L L +NR+    P+I   L+ L+ L +  N++   
Sbjct: 445 TLYLHHNQLSGHLPNDLGTLINLEDLRLSYNRLIGSIPNILGNLTKLTTLYLVSNQLSAS 504

Query: 231 LPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLT 288
           +P ELG+L NL  L L+ N L   +P  +GN T L+TL L  N+L   IP  +  L++L 
Sbjct: 505 IPKELGKLANLEGLILSENTLSGSIPNSLGNLTKLITLYLVQNQLSGSIPQEISKLMSLV 564

Query: 289 RLRLSYNRLESV-PETLSKCVHLNEFNVEGCALSS-LPDGLLSSLTSINNITLSRNKFTA 346
            L LSYN L  V P  L     L  F   G  L+  LP  LLS  TS+  + L  N+   
Sbjct: 565 ELELSYNNLSGVLPSGLCAGGLLKNFTAAGNNLTGPLPSSLLSC-TSLVRLRLDGNQLEG 623

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM----KDNLLTSLPLDLGTW 402
              G    +  +  I+   N   K+   +  R    SK+ +    K+N+   +P  +G  
Sbjct: 624 -DIGEMEVYPDLVYIDISSN---KLSGQLSHRWGECSKLTLLRASKNNIAGGIPPSIGKL 679

Query: 403 VGLTELNLGTNQI-SKLSEDIQNLVNLEVLVLSNNLLKK-LPSSIGNLRKLKCLDLEENK 460
             L +L++ +N++  ++  +I N+  L  LVL  NLL   +P  IG+L  L+ LDL  N 
Sbjct: 680 SDLRKLDVSSNKLEGQMPREIGNISMLFKLVLCGNLLHGNIPQEIGSLTNLEHLDLSSNN 739

Query: 461 LES-LPNEIGFLKELQRLILQSNQL-VSLPRAIGHLTNLSYL-SVGENNLQ-SIPEEIGT 516
           L   +P  I    +LQ L L  N L  ++P  +G L +L  L  +G+N    +IP ++  
Sbjct: 740 LTGPIPRSIEHCLKLQFLKLNHNHLDGTIPMELGMLVDLQILVDLGDNLFDGTIPSQLSG 799

Query: 517 LENLHTLYLNDNTCLNNIP 535
           L+ L  L L+ N    +IP
Sbjct: 800 LQKLEALNLSHNALSGSIP 818



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 148/340 (43%), Gaps = 83/340 (24%)

Query: 86  QADLNIEKEFLRCKEENILNLDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQI 143
           Q   +I KE    K  N+  L LS+++++  +P S+  LT L  LYL  N+L  S+P +I
Sbjct: 500 QLSASIPKEL--GKLANLEGLILSENTLSGSIPNSLGNLTKLITLYLVQNQLSGSIPQEI 557

Query: 144 GYVTNLTCLGLAENSLTS-LPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLR 201
             + +L  L L+ N+L+  LP  L     L+      N L   LP  +   TSL  L L 
Sbjct: 558 SKLMSLVELELSYNNLSGVLPSGLCAGGLLKNFTAAGNNLTGPLPSSLLSCTSLVRLRLD 617

Query: 202 FNRIKT------VHPDIQYL------------------SNLSMLSMRDNKIRE-LPPELG 236
            N+++       V+PD+ Y+                  S L++L    N I   +PP +G
Sbjct: 618 GNQLEGDIGEMEVYPDLVYIDISSNKLSGQLSHRWGECSKLTLLRASKNNIAGGIPPSIG 677

Query: 237 ELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNEL-VNIPDMLGNLINLTRLRLSY 294
           +L +L  LD++ N LE ++P+EIGN +ML  L L  N L  NIP  +G+L NL  L LS 
Sbjct: 678 KLSDLRKLDVSSNKLEGQMPREIGNISMLFKLVLCGNLLHGNIPQEIGSLTNLEHLDLSS 737

Query: 295 NRLES-VPETLSKCVHL-----NEFNVEGCA------------LSSLPDGLL-------- 328
           N L   +P ++  C+ L     N  +++G              L  L D L         
Sbjct: 738 NNLTGPIPRSIEHCLKLQFLKLNHNHLDGTIPMELGMLVDLQILVDLGDNLFDGTIPSQL 797

Query: 329 ------------------------SSLTSINNITLSRNKF 344
                                    S+ S+ ++ +S NK 
Sbjct: 798 SGLQKLEALNLSHNALSGSIPPSFQSMASLISMDVSYNKL 837



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 29/195 (14%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSL-TSLPDSLANLQQLR 173
           +PPS+ KL+ L +L +  NKL   +P +IG ++ L  L L  N L  ++P  + +L  L 
Sbjct: 672 IPPSIGKLSDLRKLDVSSNKLEGQMPREIGNISMLFKLVLCGNLLHGNIPQEIGSLTNLE 731

Query: 174 VLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            LDL  N L   +P  +     L+ L L  N +                         +P
Sbjct: 732 HLDLSSNNLTGPIPRSIEHCLKLQFLKLNHNHLDGT----------------------IP 769

Query: 233 PELGELKNL-VTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTR 289
            ELG L +L + +DL  N  +  +P ++     L  L+L HN L   IP    ++ +L  
Sbjct: 770 MELGMLVDLQILVDLGDNLFDGTIPSQLSGLQKLEALNLSHNALSGSIPPSFQSMASLIS 829

Query: 290 LRLSYNRLES-VPET 303
           + +SYN+LE  VP++
Sbjct: 830 MDVSYNKLEGPVPQS 844


>gi|418727704|ref|ZP_13286292.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959062|gb|EKO22839.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 356

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/312 (36%), Positives = 175/312 (56%), Gaps = 26/312 (8%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L++   K+  LP E+ +L+NL +LDLA+N  + LPKEIG    L  L+L +N+L N
Sbjct: 49  DVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKN 108

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L NL  L LS NRL + P+ + +  +L + N++   L++L   +   L ++  
Sbjct: 109 LPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEI-GQLKNLQK 167

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L +N+  A P                 N+I ++        +NL ++ + +N LT LP
Sbjct: 168 LNLDKNRLKALP-----------------NEIGQL--------QNLQELYLSNNQLTILP 202

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  L LG NQ++ L ++I  L NL++L   NN L  LP  IG L+KL+ L L
Sbjct: 203 EEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYL 262

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+L +LP EIG L+ LQ L L  NQL +LP+ IG L NL       N L  +P+EIG 
Sbjct: 263 SHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQ 322

Query: 517 LENLHTLYLNDN 528
           L+NL  L LN+N
Sbjct: 323 LQNLQWLKLNNN 334



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 109/303 (35%), Positives = 171/303 (56%), Gaps = 4/303 (1%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  L+L   +L  +P  +  L NL  L L+ N+ +++P+ + +  +L E
Sbjct: 39  DLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQE 98

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            N+    L +LP  +   L ++  + LS N+ T +P     Q  ++  +N ++NQ+  + 
Sbjct: 99  LNLWNNQLKNLPKEI-GQLQNLQTLILSVNRLTTFPQE-IGQLKNLQKLNLDYNQLTTLL 156

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + KNL K+N+  N L +LP ++G    L EL L  NQ++ L E+I  L NL+ L+
Sbjct: 157 QEI-GQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALI 215

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L +N L  LP  IG L+ LK L    N+L  LP EIG L++LQ L L  NQL +LP+ IG
Sbjct: 216 LGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIG 275

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L + +N L ++P+EIG L+NL T +++ N  L  +P E+    NLQ + L+N 
Sbjct: 276 QLENLQELYLNDNQLTTLPKEIGQLKNLQT-FISFNNQLTMLPQEIGQLQNLQWLKLNNN 334

Query: 553 PLS 555
            LS
Sbjct: 335 QLS 337



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 174/325 (53%), Gaps = 11/325 (3%)

Query: 145 YVTNLTCLGLAE----NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           ++  L+C   AE     +   L  +L N   +RVL+L   KL  LP  + +L +LK L L
Sbjct: 19  FLIYLSCEIQAEKIKPGTYRDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDL 78

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
             N+ KT+  +I  L NL  L++ +N+++ LP E+G+L+NL TL L+ N L   P+EIG 
Sbjct: 79  ANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQ 138

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  L+L +N+L  +   +G L NL +L L  NRL+++P  + +  +L E  +    L
Sbjct: 139 LKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQL 198

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
           + LP+  +  L ++  + L  N+ T  P   G       +YS+N   N++  +P  I  +
Sbjct: 199 TILPEE-IGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVN---NELTILPQEI-GQ 253

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
            + L  + +  N LT+LP ++G    L EL L  NQ++ L ++I  L NL+  +  NN L
Sbjct: 254 LQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQL 313

Query: 439 KKLPSSIGNLRKLKCLDLEENKLES 463
             LP  IG L+ L+ L L  N+L S
Sbjct: 314 TMLPQEIGQLQNLQWLKLNNNQLSS 338



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/249 (34%), Positives = 140/249 (56%), Gaps = 1/249 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +LDL+ +    LP  + +L +L+EL L+ N+L +LP +IG + NL  L L+ N LT
Sbjct: 71  QNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLT 130

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           + P  +  L+ L+ L+L +N+L  L   + +L +L+ L L  NR+K +  +I  L NL  
Sbjct: 131 TFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQE 190

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++  LP E+G+LKNL  L L  N L  LPKEIG    L  L   +NEL  +P  
Sbjct: 191 LYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQE 250

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L  L  L LS+N+L ++P+ + +  +L E  +    L++LP   +  L ++      
Sbjct: 251 IGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKE-IGQLKNLQTFISF 309

Query: 341 RNKFTAYPS 349
            N+ T  P 
Sbjct: 310 NNQLTMLPQ 318



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 159/322 (49%), Gaps = 27/322 (8%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  +++L +L+ L L  N+  +LP +IG + NL  L L  N L +LP  
Sbjct: 53  LNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ L L  N+L   P  + +L +L+ L L +N++ T+  +I  L NL  L++  
Sbjct: 113 IGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDK 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+++ LP E+G+L+NL  L L++N L  LP+EIG    L  L L  N+L  +P  +G L 
Sbjct: 173 NRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L    N L  +P+ + +   L    +    L++LP   +  L ++  + L+ N+ T
Sbjct: 233 NLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKE-IGQLENLQELYLNDNQLT 291

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                             + KNL      +N LT LP ++G    L
Sbjct: 292 TLPKE-------------------------IGQLKNLQTFISFNNQLTMLPQEIGQLQNL 326

Query: 406 TELNLGTNQISKLSED-IQNLV 426
             L L  NQ+S   E+ IQ L+
Sbjct: 327 QWLKLNNNQLSSQEEERIQKLL 348



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 104/174 (59%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L K+ +  LP  + +L +L+ELYL  N+L  LP +IG + NL  L L +N LT
Sbjct: 163 KNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLT 222

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L++L   +N+L  LP  + +L  L+ LYL  N++ T+  +I  L NL  
Sbjct: 223 ILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQE 282

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L + DN++  LP E+G+LKNL T    +N L  LP+EIG    L  L L +N+L
Sbjct: 283 LYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQL 336



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 123/222 (55%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L LS + +T  P  + +L +L++L L  N+L +L  +IG + NL  L L +N L 
Sbjct: 117 QNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLK 176

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L L +N+L  LP  + +L +L+ L L  N++  +  +I  L NL +
Sbjct: 177 ALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKL 236

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L   +N++  LP E+G+L+ L  L L+HN L  LPKEIG    L  L L  N+L  +P  
Sbjct: 237 LYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKE 296

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           +G L NL       N+L  +P+ + +  +L    +    LSS
Sbjct: 297 IGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLSS 338


>gi|443689982|gb|ELT92244.1| hypothetical protein CAPTEDRAFT_174612, partial [Capitella teleta]
          Length = 481

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 203/401 (50%), Gaps = 19/401 (4%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           +  LP ++ K+  L++L+L  N+L +LP  IG  + L  + +  N + SLPDS++ L  L
Sbjct: 69  LKQLPDTMAKMRDLQKLFLQENQLGALPHTIGAFSQLKVMNIVGNRVKSLPDSVSELSAL 128

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR-EL 231
             + L  N+L  LP    +LT L+ L +  N +  +  DI  LS L +L++  NK+   L
Sbjct: 129 EEIYLDENQLEGLPSSFVQLTCLQRLEISDNILAHLPKDIGNLSKLRVLNVSGNKLEGSL 188

Query: 232 PPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLR 291
           P   G++ ++  +DL+HN L ELP +      LV L  + N L ++PD + +L N+  L 
Sbjct: 189 PESFGDISSVCEIDLSHNQLSELPPKCRFNQSLVKLFAEQNVLQSLPDWINHLPNVKHLS 248

Query: 292 LSYNRLESVPETLS---KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
              N L   P T S       L   ++ G  +S LP+ +  +L  +  I +         
Sbjct: 249 FRDNVLRRTPFTESFGETSTDLKVLDISGNFISGLPESI-GNLKKLEKIQIG-------- 299

Query: 349 SGGPTQFTSVYSINFEH-NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
               +    +   +F++ N ID++P   FS    L +  + +N ++ LP D G  V L  
Sbjct: 300 ----SVICELERRHFQNGNWIDQLP-SRFSHMTMLKEAYLDENQISELPEDFGRLVNLEF 354

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           ++LG NQ+ +L +    L +L V  LS NLL+ LP +IG L+ L  L L+ N++  +P+ 
Sbjct: 355 IDLGQNQLRRLPDSFCQLRSLRVCQLSKNLLECLPENIGELKSLVDLRLDNNQISDVPSS 414

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
           +G L  LQ L L  N    LP  +  LTNL  L V EN  +
Sbjct: 415 LGELSNLQSLDLFHNLFTELPACLSKLTNLVRLDVYENKFE 455



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 136/443 (30%), Positives = 216/443 (48%), Gaps = 24/443 (5%)

Query: 107 DLSKSSITHLPPSVEK---LTHLEELYLYGNKLASLPSQIGY-VTNLTCLGLAENSLTSL 162
           D S   +  LP S+        L EL+L  N +  LP+ +   +  LT      N L  L
Sbjct: 13  DFSSLDLESLPTSLSDPVFCGSLTELFLDYNSICDLPASLFENLEKLTLFSAVGNELKQL 72

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           PD++A ++ L+ L L+ N+L  LP  +   + LK++ +  NR+K++   +  LS L  + 
Sbjct: 73  PDTMAKMRDLQKLFLQENQLGALPHTIGAFSQLKVMNIVGNRVKSLPDSVSELSALEEIY 132

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV-NIPDML 281
           + +N++  LP    +L  L  L+++ N L  LPK+IGN + L  L++  N+L  ++P+  
Sbjct: 133 LDENQLEGLPSSFVQLTCLQRLEISDNILAHLPKDIGNLSKLRVLNVSGNKLEGSLPESF 192

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G++ ++  + LS+N+L  +P        L +   E   L SLPD  ++ L ++ +++   
Sbjct: 193 GDISSVCEIDLSHNQLSELPPKCRFNQSLVKLFAEQNVLQSLPD-WINHLPNVKHLSFRD 251

Query: 342 NKFTAYP---SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD--------- 389
           N     P   S G T  T +  ++   N I  +P  I    K L K+ +           
Sbjct: 252 NVLRRTPFTESFGETS-TDLKVLDISGNFISGLPESI-GNLKKLEKIQIGSVICELERRH 309

Query: 390 ----NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
               N +  LP        L E  L  NQIS+L ED   LVNLE + L  N L++LP S 
Sbjct: 310 FQNGNWIDQLPSRFSHMTMLKEAYLDENQISELPEDFGRLVNLEFIDLGQNQLRRLPDSF 369

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
             LR L+   L +N LE LP  IG LK L  L L +NQ+  +P ++G L+NL  L +  N
Sbjct: 370 CQLRSLRVCQLSKNLLECLPENIGELKSLVDLRLDNNQISDVPSSLGELSNLQSLDLFHN 429

Query: 506 NLQSIPEEIGTLENLHTLYLNDN 528
               +P  +  L NL  L + +N
Sbjct: 430 LFTELPACLSKLTNLVRLDVYEN 452



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 95/182 (52%), Gaps = 13/182 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEEL-------------YLYGNKLASLPSQIGYVTNLTCL 152
           LD+S + I+ LP S+  L  LE++             +  GN +  LPS+  ++T L   
Sbjct: 273 LDISGNFISGLPESIGNLKKLEKIQIGSVICELERRHFQNGNWIDQLPSRFSHMTMLKEA 332

Query: 153 GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
            L EN ++ LP+    L  L  +DL  N+L  LP    +L SL++  L  N ++ +  +I
Sbjct: 333 YLDENQISELPEDFGRLVNLEFIDLGQNQLRRLPDSFCQLRSLRVCQLSKNLLECLPENI 392

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L +L  L + +N+I ++P  LGEL NL +LDL HN   ELP  +   T LV LD+  N
Sbjct: 393 GELKSLVDLRLDNNQISDVPSSLGELSNLQSLDLFHNLFTELPACLSKLTNLVRLDVYEN 452

Query: 273 EL 274
           + 
Sbjct: 453 KF 454



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 83/154 (53%)

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LT  +   N++ +L + +  + +L+ L L  N L  LP +IG   +LK +++  N+++SL
Sbjct: 59  LTLFSAVGNELKQLPDTMAKMRDLQKLFLQENQLGALPHTIGAFSQLKVMNIVGNRVKSL 118

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P+ +  L  L+ + L  NQL  LP +   LT L  L + +N L  +P++IG L  L  L 
Sbjct: 119 PDSVSELSALEEIYLDENQLEGLPSSFVQLTCLQRLEISDNILAHLPKDIGNLSKLRVLN 178

Query: 525 LNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           ++ N    ++P      S++  + L +  LS++P
Sbjct: 179 VSGNKLEGSLPESFGDISSVCEIDLSHNQLSELP 212



 Score = 45.8 bits (107), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 47/85 (55%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C+  ++    LSK+ +  LP ++ +L  L +L L  N+++ +PS +G ++NL  L L  N
Sbjct: 370 CQLRSLRVCQLSKNLLECLPENIGELKSLVDLRLDNNQISDVPSSLGELSNLQSLDLFHN 429

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKL 182
             T LP  L+ L  L  LD+  NK 
Sbjct: 430 LFTELPACLSKLTNLVRLDVYENKF 454


>gi|405968548|gb|EKC33612.1| hypothetical protein CGI_10017764 [Crassostrea gigas]
          Length = 799

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 257/516 (49%), Gaps = 55/516 (10%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            K+ NI  ++L+++ +T +P +++KL+ L  L L  N +  +P+QIG V  L  L L+ N
Sbjct: 198 VKKPNIQKINLARNGVTLIPENIDKLSRLTWLDLSHNAVQEIPAQIGGVRFLHYLNLSHN 257

Query: 158 SLTSLP------------------------DSLANLQQLRVLDLRHNKLNELPMVVYKLT 193
            + +LP                        D + +L++L   D+ +N++  LP  + +L 
Sbjct: 258 HIKTLPEEICNLGYALDHLDISHNEIPVLPDGMKSLRKLTYFDVSNNEVEYLPESIRELP 317

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
            L  L +  N++ ++   + YL  L  L +  N I  +P E+  +K+LVTLDL+ N ++E
Sbjct: 318 CLTTLGVSQNKLMSMKFAV-YLKQLEHLYLSRNSIEVIPEEIDHMKSLVTLDLSWNKIKE 376

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LP  IGN   L +L++  N+L  IPD LG+   LT L LS+NRL  +P  L K  +L  F
Sbjct: 377 LPSSIGNVKSLKSLNVCGNKLSAIPDSLGHGQVLTFLDLSHNRLTVLPSDLRKLRNLETF 436

Query: 314 NVEGCALSSLPDGL-----LSSL-------------TSINNITLSRNKFTAYPS------ 349
           +V    ++ +P  +     L SL              ++ ++ +S N  +  P+      
Sbjct: 437 HVSHNEIALMPKSIDFLYQLRSLDVSKNGLNELNLPKTLTHLNMSDNPLSINPTDIRSTI 496

Query: 350 ---GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
              G      ++ S+   +  +D+IP  +F+  + L  +++ +N L +L  ++    GL 
Sbjct: 497 VVMGDKDHLRNLTSLALCNLGMDEIPPSVFN-LRCLKHLDLSNNALKTLTDNVCKMRGLV 555

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            +    N+I+ L E I  L  LE L +SNN L     S+G L  L  L++  NK+  LP+
Sbjct: 556 SITACHNEITALPEKISALKKLEKLHVSNNGLTSFSPSLGRLVSLCDLNMSNNKITLLPD 615

Query: 467 EIGFLKELQRLILQSNQLVSLPR-AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
             G L +L  + L  N+L++ P+  I  L +L +L++ +N++  +P E   L  L  L  
Sbjct: 616 NFGDLNKLINMDLSENELLNFPKDQIDVLASLLHLNISKNHIDQMPIEFPYLYRLKVLRA 675

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             N  L +IP ++    +L+++ + +  +  +P +I
Sbjct: 676 ASND-LKSIPSDMDKMKSLEVLDISDNIIESLPEKI 710



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 221/429 (51%), Gaps = 22/429 (5%)

Query: 112 SITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQ 171
           +I  LPP++ K T L++LY   NK+ +LP  IG  + ++ + ++ N + S+   L  +  
Sbjct: 123 AIKKLPPAIHKCTGLQKLYASNNKIRALPKSIGKAS-ISYMDVSSNMIRSIKKGLYEMTA 181

Query: 172 LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
              +DL  N++ E+P    K  +++ + L  N +  +  +I  LS L+ L +  N ++E+
Sbjct: 182 --EVDLSDNRITEMPTAAVKKPNIQKINLARNGVTLIPENIDKLSRLTWLDLSHNAVQEI 239

Query: 232 PPELGELKNLVTLDLAHNHLEELPKEIGNCT-MLVTLDLQHNELVNIPDMLGNLINLTRL 290
           P ++G ++ L  L+L+HNH++ LP+EI N    L  LD+ HNE+  +PD + +L  LT  
Sbjct: 240 PAQIGGVRFLHYLNLSHNHIKTLPEEICNLGYALDHLDISHNEIPVLPDGMKSLRKLTYF 299

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            +S N +E +PE++ +   L    V    L S+   +   L  + ++ LSRN     P  
Sbjct: 300 DVSNNEVEYLPESIRELPCLTTLGVSQNKLMSMKFAVY--LKQLEHLYLSRNSIEVIPEE 357

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                 S+ +++   N+I ++P  I    K+L  +N+  N L+++P  LG    LT L+L
Sbjct: 358 I-DHMKSLVTLDLSWNKIKELPSSI-GNVKSLKSLNVCGNKLSAIPDSLGHGQVLTFLDL 415

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+++ L  D++ L NLE   +S+N +  +P SI  L +L+ LD+ +N L    NE+  
Sbjct: 416 SHNRLTVLPSDLRKLRNLETFHVSHNEIALMPKSIDFLYQLRSLDVSKNGL----NELNL 471

Query: 471 LKELQRLILQSNQLVSLPRAI----------GHLTNLSYLSVGENNLQSIPEEIGTLENL 520
            K L  L +  N L   P  I           HL NL+ L++    +  IP  +  L  L
Sbjct: 472 PKTLTHLNMSDNPLSINPTDIRSTIVVMGDKDHLRNLTSLALCNLGMDEIPPSVFNLRCL 531

Query: 521 HTLYLNDNT 529
             L L++N 
Sbjct: 532 KHLDLSNNA 540



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 221/428 (51%), Gaps = 11/428 (2%)

Query: 134 NKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLT 193
           N+L  LP  I  + NL  + +  N+L++ P S++ +++L VL +++N + +LP  ++K T
Sbjct: 76  NRLKRLPKSIAALENLEHIDITNNTLSAFPGSVSRMKKLEVLIIKNNAIKKLPPAIHKCT 135

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
            L+ LY   N+I+ +   I   S +S + +  N IR +   L E+     +DL+ N + E
Sbjct: 136 GLQKLYASNNKIRALPKSIGKAS-ISYMDVSSNMIRSIKKGLYEMT--AEVDLSDNRITE 192

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           +P        +  ++L  N +  IP+ +  L  LT L LS+N ++ +P  +     L+  
Sbjct: 193 MPTAAVKKPNIQKINLARNGVTLIPENIDKLSRLTWLDLSHNAVQEIPAQIGGVRFLHYL 252

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           N+    + +LP+ + +   +++++ +S N+    P G  +     Y  +  +N+++ +P 
Sbjct: 253 NLSHNHIKTLPEEICNLGYALDHLDISHNEIPVLPDGMKSLRKLTY-FDVSNNEVEYLPE 311

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
            I      L+ + +  N L S+   +     L  L L  N I  + E+I ++ +L  L L
Sbjct: 312 SI-RELPCLTTLGVSQNKLMSMKFAV-YLKQLEHLYLSRNSIEVIPEEIDHMKSLVTLDL 369

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           S N +K+LPSSIGN++ LK L++  NKL ++P+ +G  + L  L L  N+L  LP  +  
Sbjct: 370 SWNKIKELPSSIGNVKSLKSLNVCGNKLSAIPDSLGHGQVLTFLDLSHNRLTVLPSDLRK 429

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L NL    V  N +  +P+ I  L  L +L ++ N  LN    EL L   L  +++ + P
Sbjct: 430 LRNLETFHVSHNEIALMPKSIDFLYQLRSLDVSKNG-LN----ELNLPKTLTHLNMSDNP 484

Query: 554 LSQIPSEI 561
           LS  P++I
Sbjct: 485 LSINPTDI 492



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 195/421 (46%), Gaps = 57/421 (13%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +L LS++SI  +P  ++ +  L  L L  NK+  LPS IG V +L  L +  N L+++PD
Sbjct: 343 HLYLSRNSIEVIPEEIDHMKSLVTLDLSWNKIKELPSSIGNVKSLKSLNVCGNKLSAIPD 402

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
           SL + Q L  LDL HN+L  LP  + KL +L+  ++  N I  +   I +L  L  L + 
Sbjct: 403 SLGHGQVLTFLDLSHNRLTVLPSDLRKLRNLETFHVSHNEIALMPKSIDFLYQLRSLDVS 462

Query: 225 DNKIREL-------------------PPEL----------GELKNLVTLDLAHNHLEELP 255
            N + EL                   P ++            L+NL +L L +  ++E+P
Sbjct: 463 KNGLNELNLPKTLTHLNMSDNPLSINPTDIRSTIVVMGDKDHLRNLTSLALCNLGMDEIP 522

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
             + N   L  LDL +N L  + D +  +  L  +   +N + ++PE +S    L + +V
Sbjct: 523 PSVFNLRCLKHLDLSNNALKTLTDNVCKMRGLVSITACHNEITALPEKISALKKLEKLHV 582

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
               L+S     L  L S+ ++ +S NK T  P                           
Sbjct: 583 SNNGLTSFSPS-LGRLVSLCDLNMSNNKITLLPDN------------------------- 616

Query: 376 FSRAKNLSKVNMKDNLLTSLPLD-LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           F     L  +++ +N L + P D +     L  LN+  N I ++  +   L  L+VL  +
Sbjct: 617 FGDLNKLINMDLSENELLNFPKDQIDVLASLLHLNISKNHIDQMPIEFPYLYRLKVLRAA 676

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV-SLPRAIGH 493
           +N LK +PS +  ++ L+ LD+ +N +ESLP +I  + EL+ + +  N++    P+A  +
Sbjct: 677 SNDLKSIPSDMDKMKSLEVLDISDNIIESLPEKICKMPELKEINVSENKITRGWPKAWEN 736

Query: 494 L 494
           L
Sbjct: 737 L 737



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 94/179 (52%), Gaps = 1/179 (0%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           CK   ++++    + IT LP  +  L  LE+L++  N L S    +G + +L  L ++ N
Sbjct: 549 CKMRGLVSITACHNEITALPEKISALKKLEKLHVSNNGLTSFSPSLGRLVSLCDLNMSNN 608

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPM-VVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
            +T LPD+  +L +L  +DL  N+L   P   +  L SL  L +  N I  +  +  YL 
Sbjct: 609 KITLLPDNFGDLNKLINMDLSENELLNFPKDQIDVLASLLHLNISKNHIDQMPIEFPYLY 668

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
            L +L    N ++ +P ++ ++K+L  LD++ N +E LP++I     L  +++  N++ 
Sbjct: 669 RLKVLRAASNDLKSIPSDMDKMKSLEVLDISDNIIESLPEKICKMPELKEINVSENKIT 727



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 48/81 (59%)

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
           NN LK+LP SI  L  L+ +D+  N L + P  +  +K+L+ LI+++N +  LP AI   
Sbjct: 75  NNRLKRLPKSIAALENLEHIDITNNTLSAFPGSVSRMKKLEVLIIKNNAIKKLPPAIHKC 134

Query: 495 TNLSYLSVGENNLQSIPEEIG 515
           T L  L    N ++++P+ IG
Sbjct: 135 TGLQKLYASNNKIRALPKSIG 155


>gi|456982733|gb|EMG19248.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 299

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/322 (35%), Positives = 180/322 (55%), Gaps = 26/322 (8%)

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N++ T+  +I  L  L  L +  N++  LP E+G+LKNL +L+L++N ++ +PKEI    
Sbjct: 4   NQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQ 63

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L +L L +N+L  +P  +G L NL  L LS NRL ++P+ + +  +L   ++    L++
Sbjct: 64  KLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTT 123

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LP  +   L ++  + L  N+ T  P                 N+I ++        KNL
Sbjct: 124 LPQEI-GHLQNLQELYLVSNQLTILP-----------------NEIGQL--------KNL 157

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             +N+++N LT+L  ++     L  L+L +NQ++   ++I  L NL+VL L +N L  LP
Sbjct: 158 QTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLP 217

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
             IG L+ L+ LDL+ N+L +LP EI  LK LQ L L  NQL +LP+ I  L NL  L +
Sbjct: 218 EGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLYL 277

Query: 503 GENNLQSIPEEIGTLENLHTLY 524
           G N L  +P+EIG L+NL  L+
Sbjct: 278 GYNQLTVLPKEIGQLQNLKVLF 299



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/302 (36%), Positives = 172/302 (56%), Gaps = 4/302 (1%)

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           + +N L  LP+EIG    L  L L  N+L  +P  +G L NL  L LSYN+++++P+ + 
Sbjct: 1   MPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE 60

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
           K   L    ++   L++LP  +   L ++ ++ LS N+ T  P     Q  ++ S++   
Sbjct: 61  KLQKLQSLGLDNNQLTTLPQEI-GQLQNLQSLDLSTNRLTTLPQE-IGQLQNLQSLDLST 118

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           N++  +P  I    +NL ++ +  N LT LP ++G    L  LNL  N+++ LS++I+ L
Sbjct: 119 NRLTTLPQEI-GHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQL 177

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
            NL+ L L +N L   P  IG L+ L+ LDL  N+L +LP  IG LK LQ L L SNQL 
Sbjct: 178 QNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLT 237

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
           +LP+ I  L NL  L +  N L+++P+EI  L+NL TLYL  N  L  +P E+    NL+
Sbjct: 238 TLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLYLGYNQ-LTVLPKEIGQLQNLK 296

Query: 546 IM 547
           ++
Sbjct: 297 VL 298



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 90/248 (36%), Positives = 142/248 (57%), Gaps = 1/248 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L+LS + I  +P  +EKL  L+ L L  N+L +LP +IG + NL  L L+ N LT
Sbjct: 40  KNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLT 99

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ L+ LDL  N+L  LP  +  L +L+ LYL  N++  +  +I  L NL  
Sbjct: 100 TLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQT 159

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++R+N++  L  E+ +L+NL +LDL  N L   PKEIG    L  LDL  N+L  +P+ 
Sbjct: 160 LNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEG 219

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L ++P+ + +  +L   ++    L +LP   +  L ++  + L 
Sbjct: 220 IGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKE-IEQLKNLQTLYLG 278

Query: 341 RNKFTAYP 348
            N+ T  P
Sbjct: 279 YNQLTVLP 286



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/234 (38%), Positives = 136/234 (58%), Gaps = 2/234 (0%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           I KE  + ++   L LD   + +T LP  + +L +L+ L L  N+L +LP +IG + NL 
Sbjct: 55  IPKEIEKLQKLQSLGLD--NNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQ 112

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L+ N LT+LP  + +LQ L+ L L  N+L  LP  + +L +L+ L LR NR+ T+  
Sbjct: 113 SLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK 172

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           +I+ L NL  L +R N++   P E+G+LKNL  LDL  N L  LP+ IG    L TLDL 
Sbjct: 173 EIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLD 232

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
            N+L  +P  +  L NL  L LSYN+L+++P+ + +  +L    +    L+ LP
Sbjct: 233 SNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLYLGYNQLTVLP 286



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/290 (33%), Positives = 158/290 (54%), Gaps = 3/290 (1%)

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
           + +T LP  + +L  L+ LYL  N+L +LP +IG + NL  L L+ N + ++P  +  LQ
Sbjct: 4   NQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQ 63

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           +L+ L L +N+L  LP  + +L +L+ L L  NR+ T+  +I  L NL  L +  N++  
Sbjct: 64  KLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTT 123

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+G L+NL  L L  N L  LP EIG    L TL+L++N L  +   +  L NL  L
Sbjct: 124 LPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 183

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L  N+L   P+ + +  +L   ++    L++LP+G +  L ++  + L  N+ T  P  
Sbjct: 184 DLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEG-IGQLKNLQTLDLDSNQLTTLPQ- 241

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
              Q  ++  ++  +NQ+  +P  I  + KNL  + +  N LT LP ++G
Sbjct: 242 EIKQLKNLQLLDLSYNQLKTLPKEI-EQLKNLQTLYLGYNQLTVLPKEIG 290



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 151/270 (55%), Gaps = 2/270 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L K+ +T LP  + +L +L+ L L  N++ ++P +I  +  L  LGL  N LT+LP  
Sbjct: 22  LYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQE 81

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ LDL  N+L  LP  + +L +L+ L L  NR+ T+  +I +L NL  L +  
Sbjct: 82  IGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVS 141

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL TL+L +N L  L KEI     L +LDL+ N+L   P  +G L 
Sbjct: 142 NQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLK 201

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L ++PE + +  +L   +++   L++LP   +  L ++  + LS N+  
Sbjct: 202 NLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE-IKQLKNLQLLDLSYNQLK 260

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
             P     Q  ++ ++   +NQ+  +P  I
Sbjct: 261 TLPK-EIEQLKNLQTLYLGYNQLTVLPKEI 289



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/269 (35%), Positives = 152/269 (56%), Gaps = 8/269 (2%)

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTAYPSGGP 352
           N+L ++P+ + +   L    +    L++LP   G L +L S+N   LS N+    P    
Sbjct: 4   NQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLN---LSYNQIKTIPKE-I 59

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
            +   + S+  ++NQ+  +P  I  + +NL  +++  N LT+LP ++G    L  L+L T
Sbjct: 60  EKLQKLQSLGLDNNQLTTLPQEI-GQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLST 118

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N+++ L ++I +L NL+ L L +N L  LP+ IG L+ L+ L+L  N+L +L  EI  L+
Sbjct: 119 NRLTTLPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQ 178

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            L+ L L+SNQL   P+ IG L NL  L +G N L ++PE IG L+NL TL L+ N  L 
Sbjct: 179 NLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQ-LT 237

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            +P E+    NLQ++ L    L  +P EI
Sbjct: 238 TLPQEIKQLKNLQLLDLSYNQLKTLPKEI 266



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/210 (39%), Positives = 126/210 (60%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +LDLS + +T LP  + +L +L+ L L  N+L +LP +IG++ NL  L L  N LT
Sbjct: 86  QNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLT 145

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP+ +  L+ L+ L+LR+N+L  L   + +L +LK L LR N++     +I  L NL +
Sbjct: 146 ILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQV 205

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP  +G+LKNL TLDL  N L  LP+EI     L  LDL +N+L  +P  
Sbjct: 206 LDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKE 265

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           +  L NL  L L YN+L  +P+ + +  +L
Sbjct: 266 IEQLKNLQTLYLGYNQLTVLPKEIGQLQNL 295



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/197 (40%), Positives = 114/197 (57%), Gaps = 2/197 (1%)

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN 424
           +NQ+  +P  I  + + L  + +  N LT+LP ++G    L  LNL  NQI  + ++I+ 
Sbjct: 3   NNQLTTLPQEI-GQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEK 61

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           L  L+ L L NN L  LP  IG L+ L+ LDL  N+L +LP EIG L+ LQ L L +N+L
Sbjct: 62  LQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRL 121

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
            +LP+ IGHL NL  L +  N L  +P EIG L+NL TL L +N  L  +  E+    NL
Sbjct: 122 TTLPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNR-LTTLSKEIEQLQNL 180

Query: 545 QIMSLDNCPLSQIPSEI 561
           + + L +  L+  P EI
Sbjct: 181 KSLDLRSNQLTIFPKEI 197



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 105/190 (55%), Gaps = 23/190 (12%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +LDLS + +T LP  +  L +L+ELYL  N+L  LP++IG + NL  L L  N LT
Sbjct: 109 QNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLT 168

Query: 161 SL-----------------------PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
           +L                       P  +  L+ L+VLDL  N+L  LP  + +L +L+ 
Sbjct: 169 TLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQT 228

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L L  N++ T+  +I+ L NL +L +  N+++ LP E+ +LKNL TL L +N L  LPKE
Sbjct: 229 LDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLYLGYNQLTVLPKE 288

Query: 258 IGNCTMLVTL 267
           IG    L  L
Sbjct: 289 IGQLQNLKVL 298



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 60/99 (60%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  + +L +L+ L L  N+L +LP +I  + NL  L L+ N L 
Sbjct: 201 KNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLK 260

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILY 199
           +LP  +  L+ L+ L L +N+L  LP  + +L +LK+L+
Sbjct: 261 TLPKEIEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLF 299


>gi|195110491|ref|XP_001999813.1| GI22874 [Drosophila mojavensis]
 gi|193916407|gb|EDW15274.1| GI22874 [Drosophila mojavensis]
          Length = 1865

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 125/364 (34%), Positives = 180/364 (49%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLQE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EIG    L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIGGMVSLTDLDLAQNLLETLPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  CV++ E  +    LS LP   + ++T ++N+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCVNMQELILTENFLSELP-ASIGNMTKLSNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 209/424 (49%), Gaps = 51/424 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LGL++N +  LP 
Sbjct: 18  VDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPP 77

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            + N + L  LD+  N + ++P  +  L SL++     N I  +      L NL++L + 
Sbjct: 78  DIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLN 137

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE+ ++P  LG L
Sbjct: 138 DMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYL 197

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             L  L L +N+L+ +P  L                     GLL+ LT ++   +S N+ 
Sbjct: 198 PGLQELWLDHNQLQRLPPEL---------------------GLLTKLTYLD---VSENRL 233

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
              P                 N+I     G+ S    L+ +++  NLL +LP  +     
Sbjct: 234 EELP-----------------NEIG----GMVS----LTDLDLAQNLLETLPDGIAKLSR 268

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LT L L  N++ +L++ + N VN++ L+L+ N L +LP+SIGN+ KL  L+++ N LE L
Sbjct: 269 LTILKLDQNRLQRLNDTLGNCVNMQELILTENFLSELPASIGNMTKLSNLNVDRNALEYL 328

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  +  L+ L  ++
Sbjct: 329 PLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQ-LKAVW 387

Query: 525 LNDN 528
           L++N
Sbjct: 388 LSEN 391



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 192/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L+ L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLQELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  +V+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEIGGMVSLTDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G    +Q LIL  N L  LP +IG++T LS L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCVNMQELILTENFLSELPASIGNMTKLSNLNVDRNALEYLPLEIGQCSNLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 188/393 (47%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLQELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +   V L + ++    L +LPDG+   
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIGGMVSLTDLDLAQNLLETLPDGI--- 263

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
                                  + + +  +  + N++ ++         N+ ++ + +N
Sbjct: 264 ----------------------AKLSRLTILKLDQNRLQRL-NDTLGNCVNMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L+ LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGNMTKLSNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|417760264|ref|ZP_12408290.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774468|ref|ZP_12422333.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418675383|ref|ZP_13236674.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943831|gb|EKN89422.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410575801|gb|EKQ38818.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410577545|gb|EKQ45415.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 384

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 135/394 (34%), Positives = 202/394 (51%), Gaps = 55/394 (13%)

Query: 145 YVTNLTCLGLAENS------LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL 198
           +V +LT     EN        T+L ++L N  ++R+LDL  +KL  LP  + +L +L+IL
Sbjct: 20  FVCSLTQFHAEENYTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQIL 79

Query: 199 YLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
               N++ T+  +I  L NL  L +++N++  LP E+G+L+NL  L L +N L  LP+EI
Sbjct: 80  NSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEI 139

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
           G    L  L+L  N L  +P  +G L NL  L LS NRL  +PE + +   L + ++ G 
Sbjct: 140 GKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGG- 198

Query: 319 ALSSLPDGLLSSLTSINNITLSRNK-FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
                                 +NK FT  P                            +
Sbjct: 199 ----------------------KNKPFTILPKE-------------------------IT 211

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           + +NL ++++K N LT LP ++G    L  L+L  N+++ L ++I  L NL VL LS N 
Sbjct: 212 QLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQ 271

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L  LP  I  L+ L+ L+LE N+ E+ P EI   + LQ+L L  NQL +LP+ IG L  L
Sbjct: 272 LTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQKLHLSRNQLTTLPKEIGRLQKL 331

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
             L +  N L ++PEEI  L+NL  LYL++N  L
Sbjct: 332 ESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLL 365



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 165/296 (55%), Gaps = 5/296 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+   + +T LP  + KL +L+EL+L  N+L +LP +IG + NL  L L  N LT
Sbjct: 74  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 133

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L+L  N+LN LP  + +L +L+ LYL  NR+  +  +I  L +L  
Sbjct: 134 TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRK 193

Query: 221 LSM--RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
           LS+  ++     LP E+ +L+NL  L L  N L  LPKEIG    L  LDL  N L  +P
Sbjct: 194 LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILP 253

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L NL  L LS N+L  +P+ +++  +L E N+E     + P   ++   ++  + 
Sbjct: 254 KEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKE-ITQFQNLQKLH 312

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
           LSRN+ T  P     +   + S+  +HNQ+  +P  I  + KNL K+ + +N L S
Sbjct: 313 LSRNQLTTLPK-EIGRLQKLESLGLDHNQLATLPEEI-KQLKNLKKLYLHNNPLLS 366



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 112/319 (35%), Positives = 176/319 (55%), Gaps = 7/319 (2%)

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           KL  LP +IG + NL  L    N LT+LP  +  LQ L+ L L++N+L  LP  + +L +
Sbjct: 62  KLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQN 121

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           LK+L+L  N++ T+  +I  L NL  L++  N++  LP E+G L+NL  L L+ N L  L
Sbjct: 122 LKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTIL 181

Query: 255 PKEIGNCTMLVTLDL--QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           P+EIG    L  L L  ++     +P  +  L NL  L L +NRL  +P+ + +  +L  
Sbjct: 182 PEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRI 241

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            ++    L+ LP   +  L ++  + LS N+ T  P    TQ  ++  +N E+N+ +  P
Sbjct: 242 LDLYQNRLTILPKE-IGQLKNLLVLDLSGNQLTILPK-EITQLQNLQELNLEYNRFEAFP 299

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I ++ +NL K+++  N LT+LP ++G    L  L L  NQ++ L E+I+ L NL+ L 
Sbjct: 300 KEI-TQFQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLY 358

Query: 433 LSNNLLKKLPSSIGNLRKL 451
           L NN L  L   I  +RKL
Sbjct: 359 LHNNPL--LSEKIERIRKL 375



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 162/320 (50%), Gaps = 29/320 (9%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           LDL+ + L+ LPKEIG    L  L+ ++N+L  +P  +G L NL  L L  N+L ++PE 
Sbjct: 56  LDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEE 115

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           + +  +L   ++    L++LP+ +   L ++  + L  N+    P               
Sbjct: 116 IGQLQNLKVLHLNNNQLTTLPEEI-GKLQNLQELNLFVNRLNILPKE------------- 161

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ--ISKLSED 421
                         R +NL ++ +  N LT LP ++G    L +L+LG      + L ++
Sbjct: 162 ------------IGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKE 209

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           I  L NL+ L L  N L  LP  IG L+ L+ LDL +N+L  LP EIG LK L  L L  
Sbjct: 210 ITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSG 269

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           NQL  LP+ I  L NL  L++  N  ++ P+EI   +NL  L+L+ N  L  +P E+   
Sbjct: 270 NQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQKLHLSRNQ-LTTLPKEIGRL 328

Query: 542 SNLQIMSLDNCPLSQIPSEI 561
             L+ + LD+  L+ +P EI
Sbjct: 329 QKLESLGLDHNQLATLPEEI 348



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 121/240 (50%), Gaps = 30/240 (12%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYV------------ 146
           K +N+  L+L  + +  LP  + +L +L+ELYL  N+L  LP +IG +            
Sbjct: 141 KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKN 200

Query: 147 -------------TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLT 193
                         NL  L L  N LT LP  +  LQ LR+LDL  N+L  LP  + +L 
Sbjct: 201 KPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLK 260

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           +L +L L  N++  +  +I  L NL  L++  N+    P E+ + +NL  L L+ N L  
Sbjct: 261 NLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQKLHLSRNQLTT 320

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN-----RLESVPETLSKCV 308
           LPKEIG    L +L L HN+L  +P+ +  L NL +L L  N     ++E + + L +C+
Sbjct: 321 LPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRKLLPQCI 380



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/146 (44%), Positives = 89/146 (60%), Gaps = 1/146 (0%)

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           + L+E ++N   + +L LS + LK LP  IG L+ L+ L+ E N+L +LP EIG L+ LQ
Sbjct: 41  TNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQ 100

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
            L LQ+NQL +LP  IG L NL  L +  N L ++PEEIG L+NL  L L  N  LN +P
Sbjct: 101 ELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNR-LNILP 159

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEI 561
            E+    NLQ + L    L+ +P EI
Sbjct: 160 KEIGRLQNLQELYLSLNRLTILPEEI 185


>gi|456891504|gb|EMG02215.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 402

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 124/357 (34%), Positives = 197/357 (55%), Gaps = 7/357 (1%)

Query: 200 LRFNRIKTVHPDIQYLSN---LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPK 256
           L+   I T H   + L N   + +L + + ++  LP E+GEL+NL  L+L  N L  LP 
Sbjct: 23  LKAQEIGTYHNLTEALQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPN 82

Query: 257 EIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE 316
           EIG    L  L+L  N+   +P+ +G L NL  L LS+N+L + P  + +  +L E ++ 
Sbjct: 83  EIGKLQNLQLLNLDKNQFTALPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLS 142

Query: 317 GCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIF 376
              L++LP+ +   L ++  + L  N+ T  P+    +   +  ++   NQ+  +   I 
Sbjct: 143 VNQLTTLPNDI-GQLQNLQVLDLEHNQLTTLPND-IGKLQKLERLSLIENQLKTLSKEI- 199

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
              K L  +++  N LT+LP ++G    L EL+L  NQ+  L  DI  L NL+VL + +N
Sbjct: 200 GYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSN 259

Query: 437 LLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
            LK LP  IG L+ L+ L L  N+L++LP EIG L+ L  L L  N+L +LP+ IG L N
Sbjct: 260 QLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQN 319

Query: 497 LSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L+ L +  N L+++P+EIG L++L  L L +N  L  +P E+     L+ + LD+ P
Sbjct: 320 LTVLDLRNNELKTLPKEIGELQSLTVLDLRNNE-LKTLPNEIGKLKELRKLHLDDIP 375



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 127/367 (34%), Positives = 200/367 (54%), Gaps = 26/367 (7%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +L ++L N   +R+LDL + +L  LP  + +L +L+IL L  N++ T+  +I  L NL +
Sbjct: 33  NLTEALQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQL 92

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  N+   LP ++G+LKNL  L L+ N L   P +IG    L  L L  N+L  +P+ 
Sbjct: 93  LNLDKNQFTALPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPND 152

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L +N+L ++P  + K   L                    L+ I N   +
Sbjct: 153 IGQLQNLQVLDLEHNQLTTLPNDIGKLQKL------------------ERLSLIENQLKT 194

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            +K   Y          +  ++   NQ+  +P  I    KNL ++++  N L +LP D+G
Sbjct: 195 LSKEIGY-------LKELQVLDLNGNQLTTLPKEI-GELKNLRELHLYKNQLKTLPNDIG 246

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L++G+NQ+  L ++I  L NL+ L L  N LK LP  IG L+ L  LDL  N+
Sbjct: 247 ELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINE 306

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L++LP EIG L+ L  L L++N+L +LP+ IG L +L+ L +  N L+++P EIG L+ L
Sbjct: 307 LKTLPKEIGELQNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKLKEL 366

Query: 521 HTLYLND 527
             L+L+D
Sbjct: 367 RKLHLDD 373



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 125/363 (34%), Positives = 196/363 (53%), Gaps = 26/363 (7%)

Query: 115 HLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRV 174
           +L  +++  T +  L L   +L +LP +IG + NL  L L  N LT+LP+ +  LQ L++
Sbjct: 33  NLTEALQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQL 92

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           L+L  N+   LP  + KL +L+ L+L FN++ T   DI  L NL  L +  N++  LP +
Sbjct: 93  LNLDKNQFTALPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPND 152

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
           +G+L+NL  LDL HN L  LP +IG    L  L L  N+L  +   +G L  L  L L+ 
Sbjct: 153 IGQLQNLQVLDLEHNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNG 212

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
           N+L ++P+ + +  +L E ++    L +LP+ +                          +
Sbjct: 213 NQLTTLPKEIGELKNLRELHLYKNQLKTLPNDI-------------------------GE 247

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
             ++  ++   NQ+  +P  I    +NL ++ +  N L +LP ++G    LT L+L  N+
Sbjct: 248 LKNLQVLHIGSNQLKTLPKEI-GELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINE 306

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +  L ++I  L NL VL L NN LK LP  IG L+ L  LDL  N+L++LPNEIG LKEL
Sbjct: 307 LKTLPKEIGELQNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKLKEL 366

Query: 475 QRL 477
           ++L
Sbjct: 367 RKL 369



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/308 (36%), Positives = 177/308 (57%), Gaps = 4/308 (1%)

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           L + + N T +  LDL +  L  +P  +G L NL  L L  N+L ++P  + K  +L   
Sbjct: 34  LTEALQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLL 93

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           N++    ++LP+ +   L ++  + LS N+ T +P+    Q  ++  ++   NQ+  +P 
Sbjct: 94  NLDKNQFTALPNDI-GKLKNLQELHLSFNQLTTFPND-IGQLQNLRELHLSVNQLTTLPN 151

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
            I  + +NL  ++++ N LT+LP D+G    L  L+L  NQ+  LS++I  L  L+VL L
Sbjct: 152 DI-GQLQNLQVLDLEHNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDL 210

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           + N L  LP  IG L+ L+ L L +N+L++LPN+IG LK LQ L + SNQL +LP+ IG 
Sbjct: 211 NGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGE 270

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L NL  L +  N L+++P+EIG L+NL  L L+ N  L  +P E+    NL ++ L N  
Sbjct: 271 LQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINE-LKTLPKEIGELQNLTVLDLRNNE 329

Query: 554 LSQIPSEI 561
           L  +P EI
Sbjct: 330 LKTLPKEI 337



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 191/353 (54%), Gaps = 26/353 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS   +T LP  + +L +L  L LY N+L +LP++IG + NL  L L +N  T+LP+ 
Sbjct: 47  LDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQFTALPND 106

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L  N+L   P  + +L +L+ L+L  N++ T+  DI  L NL +L +  
Sbjct: 107 IGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGQLQNLQVLDLEH 166

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP ++G+L+ L  L L  N L+ L KEIG    L  LDL  N+L  +P  +G L 
Sbjct: 167 NQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGELK 226

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L+++P  + +  +L   ++    L +LP      +  + N+        
Sbjct: 227 NLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLP----KEIGELQNL-------- 274

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                   Q   +Y+     NQ+  +P  I    +NL+ +++  N L +LP ++G    L
Sbjct: 275 --------QELYLYT-----NQLKTLPKEI-GELQNLTVLDLHINELKTLPKEIGELQNL 320

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           T L+L  N++  L ++I  L +L VL L NN LK LP+ IG L++L+ L L++
Sbjct: 321 TVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKLKELRKLHLDD 373



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 105/286 (36%), Positives = 159/286 (55%), Gaps = 27/286 (9%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           N+ + L N  ++  L LS  RL ++P+ + +  +L   N+    L++LP+ +   L ++ 
Sbjct: 33  NLTEALQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEI-GKLQNLQ 91

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + L +N+FTA P                 N I K+        KNL ++++  N LT+ 
Sbjct: 92  LLNLDKNQFTALP-----------------NDIGKL--------KNLQELHLSFNQLTTF 126

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P D+G    L EL+L  NQ++ L  DI  L NL+VL L +N L  LP+ IG L+KL+ L 
Sbjct: 127 PNDIGQLQNLRELHLSVNQLTTLPNDIGQLQNLQVLDLEHNQLTTLPNDIGKLQKLERLS 186

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L EN+L++L  EIG+LKELQ L L  NQL +LP+ IG L NL  L + +N L+++P +IG
Sbjct: 187 LIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIG 246

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L+NL  L++  N  L  +P E+    NLQ + L    L  +P EI
Sbjct: 247 ELKNLQVLHIGSNQ-LKTLPKEIGELQNLQELYLYTNQLKTLPKEI 291


>gi|296198441|ref|XP_002746706.1| PREDICTED: leucine-rich repeat-containing protein 1 [Callithrix
           jacchus]
          Length = 524

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 120/390 (30%), Positives = 195/390 (50%), Gaps = 28/390 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + +  +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I
Sbjct: 12  RHVETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LPPE+     LV LD++ N + E+P+ I  C  L   D   N L+ +P     L NLT
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRLPKSFPELENLT 131

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L ++   L+S+PE +    +L    +    L+ LPD L                     
Sbjct: 132 CLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSL--------------------- 170

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
               TQ   +  ++  +N+I  +P  + +    L  + +  N L+ LP ++G    L  L
Sbjct: 171 ----TQLRRLEELDLGNNEIHSLPESVGALL-CLKDLWLDGNQLSELPQEIGNLKNLLCL 225

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L +++N+L  LP  +
Sbjct: 226 DVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAV 285

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + L  L+L  NQL++LP++IG L  LS L+   N L S+P+EIG   +L    L DN
Sbjct: 286 GDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCLRDN 345

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L  IP E++  + L ++ L    L  +P
Sbjct: 346 R-LTRIPAEVSQATELHVLDLAGNRLLHLP 374



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 111/314 (35%), Positives = 165/314 (52%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 84  LVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRLPKSFPELENLTCLSVNDVSLQSL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I ++   +  L  L  L 
Sbjct: 144 PENIGNLYNLTSLELRENLLTYLPDSLTQLRRLEELDLGNNEIHSLPESVGALLCLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 204 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE +  C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 264 KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKS-IGKLKKLSNLNADRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 323 KLVSLPKEIGGCCSLT-VFCL--RDNRLTRIPAEV-SQATELHVLDLAGNRLLHLPLSL- 377

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 378 TALKLKALWLSDNQ 391



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 193/395 (48%), Gaps = 31/395 (7%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++  +D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 7   LWRCNR-HVETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFN---RIKTVHP 210
           L++N +  LP  +AN  QL  LD+  N + E+P  +    +L+I     N   R+    P
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRLPKSFP 125

Query: 211 DIQYLS--------------------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
           +++ L+                    NL+ L +R+N +  LP  L +L+ L  LDL +N 
Sbjct: 126 ELENLTCLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           +  LP+ +G    L  L L  N+L  +P  +GNL NL  L +S NRLE +PE +S    L
Sbjct: 186 IHSLPESVGALLCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQID 369
            +  +    L ++PDG +  L  ++ + + +N+ T  P   G  +  S+  +    NQ+ 
Sbjct: 246 TDLVISQNLLETIPDG-IGKLKKLSILKVDQNRLTQLPEAVGDCE--SLTELVLTENQLL 302

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
            +P  I  + K LS +N   N L SLP ++G    LT   L  N+++++  ++     L 
Sbjct: 303 TLPKSI-GKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCLRDNRLTRIPAEVSQATELH 361

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           VL L+ N L  LP S+  L KLK L L +N+ + L
Sbjct: 362 VLDLAGNRLLHLPLSLTAL-KLKALWLSDNQSQPL 395



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 165/349 (47%), Gaps = 56/349 (16%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L ELP++      L  L L  NE+  +P  + N + L  L +S N + 
Sbjct: 36  RSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIP 95

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQ 354
            +PE++S C  L   +  G  L  LP     L +LT  S+N+++L            P  
Sbjct: 96  EIPESISFCKALQIADFSGNPLMRLPKSFPELENLTCLSVNDVSLQ---------SLPEN 146

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
             ++Y                     NL+ + +++NLLT LP  L     L EL+LG N+
Sbjct: 147 IGNLY---------------------NLTSLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           I  L E +  L+ L+ L L  N L +LP  IGNL+ L CLD+ EN+LE LP EI  L  L
Sbjct: 186 IHSLPESVGALLCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN-- 532
             L++  N L ++P  IG L  LS L V +N L  +PE +G  E+L  L L +N  L   
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLP 305

Query: 533 --------------------NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                               ++P E+  C +L +  L +  L++IP+E+
Sbjct: 306 KSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCLRDNRLTRIPAEV 354



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 1/204 (0%)

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           V +I+  H  +  +P  I+  A++L ++ +  N L  LP      V L +L L  N+I +
Sbjct: 14  VETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQR 73

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L  +I N + L  L +S N + ++P SI   + L+  D   N L  LP     L+ L  L
Sbjct: 74  LPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRLPKSFPELENLTCL 133

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            +    L SLP  IG+L NL+ L + EN L  +P+ +  L  L  L L +N  ++++P  
Sbjct: 134 SVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLRRLEELDLGNNE-IHSLPES 192

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +     L+ + LD   LS++P EI
Sbjct: 193 VGALLCLKDLWLDGNQLSELPQEI 216


>gi|322510677|gb|ADX05991.1| leucine-rich repeat-containing protein [Organic Lake phycodnavirus
           1]
          Length = 707

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 125/347 (36%), Positives = 192/347 (55%), Gaps = 3/347 (0%)

Query: 147 TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK 206
           TN++ L L+  +LT+LP SL NL QL+ L L +N+L+ L  ++ +L +L+IL L+ N+I 
Sbjct: 19  TNVSKLVLSGQNLTTLPPSLLNLIQLKKLYLDNNQLDTLSEIISELDNLQILSLKNNKIV 78

Query: 207 TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
           ++   I  L+ L  L+M DNK+  LP  +G L +L  LD+  N L  LP+ IG    L  
Sbjct: 79  SLPDSIGNLTKLRSLTMGDNKLFLLPESIGNLIHLENLDIRSNILTRLPESIGELKKLSF 138

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           L L  N L  +P+ + NL NLT L L  N++ ++PE + + V +    +    LSSLP+ 
Sbjct: 139 LILDDNNLNELPETIVNLSNLTNLSLRNNKITTIPENIGQLVKIKNMLLNNNQLSSLPES 198

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
              +L  +  + L+ N     P        ++  +   +N++ +IP  I S    L K++
Sbjct: 199 F-GNLVKLEKLFLTYNMLVTLPKSFD-NLINIKILELNNNRLIQIPENIGSLTL-LEKIS 255

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           ++DN LT LP  +     L  L +  NQ++ L   I  L NLE L L NNLL  LP SIG
Sbjct: 256 LQDNKLTMLPESMCNLTLLKSLIIMNNQLTTLPARIGKLNNLENLFLENNLLTALPESIG 315

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           +LRK+  L L+ N+L +LP +  +L  L  L L++NQL +LP    +
Sbjct: 316 DLRKISILLLKNNQLTTLPEQFQYLTNLNTLTLKNNQLTTLPEQFQY 362



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/349 (34%), Positives = 185/349 (53%), Gaps = 3/349 (0%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE 156
           + +  N+  L LS  ++T LPPS+  L  L++LYL  N+L +L   I  + NL  L L  
Sbjct: 15  KQRNTNVSKLVLSGQNLTTLPPSLLNLIQLKKLYLDNNQLDTLSEIISELDNLQILSLKN 74

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N + SLPDS+ NL +LR L +  NKL  LP  +  L  L+ L +R N +  +   I  L 
Sbjct: 75  NKIVSLPDSIGNLTKLRSLTMGDNKLFLLPESIGNLIHLENLDIRSNILTRLPESIGELK 134

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
            LS L + DN + ELP  +  L NL  L L +N +  +P+ IG    +  + L +N+L +
Sbjct: 135 KLSFLILDDNNLNELPETIVNLSNLTNLSLRNNKITTIPENIGQLVKIKNMLLNNNQLSS 194

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P+  GNL+ L +L L+YN L ++P++    +++    +    L  +P+  + SLT +  
Sbjct: 195 LPESFGNLVKLEKLFLTYNMLVTLPKSFDNLINIKILELNNNRLIQIPEN-IGSLTLLEK 253

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           I+L  NK T  P       T + S+   +NQ+  +P  I  +  NL  + +++NLLT+LP
Sbjct: 254 ISLQDNKLTMLPESM-CNLTLLKSLIIMNNQLTTLPARI-GKLNNLENLFLENNLLTALP 311

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
             +G    ++ L L  NQ++ L E  Q L NL  L L NN L  LP   
Sbjct: 312 ESIGDLRKISILLLKNNQLTTLPEQFQYLTNLNTLTLKNNQLTTLPEQF 360



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 187/351 (53%), Gaps = 4/351 (1%)

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D Q  +N+S L +    +  LPP L  L  L  L L +N L+ L + I     L  L L+
Sbjct: 14  DKQRNTNVSKLVLSGQNLTTLPPSLLNLIQLKKLYLDNNQLDTLSEIISELDNLQILSLK 73

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           +N++V++PD +GNL  L  L +  N+L  +PE++   +HL   ++    L+ LP+  +  
Sbjct: 74  NNKIVSLPDSIGNLTKLRSLTMGDNKLFLLPESIGNLIHLENLDIRSNILTRLPES-IGE 132

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           L  ++ + L  N     P       +++ +++  +N+I  IP  I    K +  + + +N
Sbjct: 133 LKKLSFLILDDNNLNELPE-TIVNLSNLTNLSLRNNKITTIPENIGQLVK-IKNMLLNNN 190

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+SLP   G  V L +L L  N +  L +   NL+N+++L L+NN L ++P +IG+L  
Sbjct: 191 QLSSLPESFGNLVKLEKLFLTYNMLVTLPKSFDNLINIKILELNNNRLIQIPENIGSLTL 250

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L+ + L++NKL  LP  +  L  L+ LI+ +NQL +LP  IG L NL  L +  N L ++
Sbjct: 251 LEKISLQDNKLTMLPESMCNLTLLKSLIIMNNQLTTLPARIGKLNNLENLFLENNLLTAL 310

Query: 511 PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           PE IG L  +  L L +N  L  +P +    +NL  ++L N  L+ +P + 
Sbjct: 311 PESIGDLRKISILLLKNNQ-LTTLPEQFQYLTNLNTLTLKNNQLTTLPEQF 360



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 84/144 (58%), Gaps = 1/144 (0%)

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
           + D Q   N+  LVLS   L  LP S+ NL +LK L L+ N+L++L   I  L  LQ L 
Sbjct: 12  AWDKQRNTNVSKLVLSGQNLTTLPPSLLNLIQLKKLYLDNNQLDTLSEIISELDNLQILS 71

Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFEL 538
           L++N++VSLP +IG+LT L  L++G+N L  +PE IG L +L  L +  N  L  +P  +
Sbjct: 72  LKNNKIVSLPDSIGNLTKLRSLTMGDNKLFLLPESIGNLIHLENLDIRSN-ILTRLPESI 130

Query: 539 ALCSNLQIMSLDNCPLSQIPSEIV 562
                L  + LD+  L+++P  IV
Sbjct: 131 GELKKLSFLILDDNNLNELPETIV 154


>gi|417764090|ref|ZP_12412063.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353922|gb|EJP06075.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 356

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/288 (39%), Positives = 164/288 (56%), Gaps = 7/288 (2%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
           TLDL+ N  + LPKEIG    L  L+L  N+L  +P  +G L NL +L LS N+++++P+
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 303 TLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYS 360
            + K   L    +    L++LP   G L +L S+N   LS N+    P     +   + S
Sbjct: 112 EIEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLN---LSYNQIKTIPKE-IEKLQKLQS 167

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
           +  ++NQ+  +P  I  + +NL  +++  N LT+LP ++G    L +L L +NQ++ L  
Sbjct: 168 LGLDNNQLTTLPQEI-GQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPN 226

Query: 421 DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQ 480
           +I  L NL+ L L NN L  L   I  L+ LK LDL  N+L   P EIG LK LQ L L 
Sbjct: 227 EIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLG 286

Query: 481 SNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           SNQL +LP  IG L NL  L +  N L ++P+EIG L+NL  L+LN+N
Sbjct: 287 SNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNN 334



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/315 (35%), Positives = 167/315 (53%), Gaps = 26/315 (8%)

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           ++ L L  NR KT+  +I  L NL  L++  N++  LP E+G+LKNL  L+L+ N ++ +
Sbjct: 50  VRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTI 109

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           PKEI     L  L L  N+L  +P  +G L NL  L LSYN+++++P+ + K   L    
Sbjct: 110 PKEIEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLG 169

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           ++   L++LP  +   L ++ ++ LS N+ T  P                          
Sbjct: 170 LDNNQLTTLPQEI-GQLQNLQSLDLSTNRLTTLPQE------------------------ 204

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
                +NL  + +  N LT LP ++G    L  LNL  N+++ LS++I+ L NL+ L L 
Sbjct: 205 -IGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLR 263

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
           +N L   P  IG L+ L+ LDL  N+L +LP  IG LK LQ L L SNQL +LP+ IG L
Sbjct: 264 SNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQL 323

Query: 495 TNLSYLSVGENNLQS 509
            NL  L +  N L S
Sbjct: 324 QNLQELFLNNNQLSS 338



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 110/311 (35%), Positives = 169/311 (54%), Gaps = 26/311 (8%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS +    LP  + KL +L+EL L  N+L  LP +IG + NL  L L+ N + ++P  
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L+ L L  N+L  LP  + +L +LK L L +N+IKT+  +I+ L  L  L + +
Sbjct: 113 IEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDN 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L+NL +LDL+ N L  LP+EIG+   L  L L  N+L  +P+ +G L 
Sbjct: 173 NQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLK 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  NRL     TLSK +                      L ++ ++ L  N+ T
Sbjct: 233 NLQTLNLRNNRL----TTLSKEIE--------------------QLQNLKSLDLRSNQLT 268

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P     Q  ++  ++   NQ+  +P GI  + KNL  +++  N LT+LP ++G    L
Sbjct: 269 IFPK-EIGQLKNLQVLDLGSNQLTTLPEGI-GQLKNLQTLDLDSNQLTTLPQEIGQLQNL 326

Query: 406 TELNLGTNQIS 416
            EL L  NQ+S
Sbjct: 327 QELFLNNNQLS 337



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 91/264 (34%), Positives = 150/264 (56%), Gaps = 1/264 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS + I  +P  +EKL  L+ LYL  N+L +LP +IG + NL  L L+ N + 
Sbjct: 94  KNLRKLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIK 153

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++P  +  LQ+L+ L L +N+L  LP  + +L +L+ L L  NR+ T+  +I +L NL  
Sbjct: 154 TIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQD 213

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+LKNL TL+L +N L  L KEI     L +LDL+ N+L   P  
Sbjct: 214 LYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKE 273

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L ++PE + +  +L   +++   L++LP   +  L ++  + L+
Sbjct: 274 IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE-IGQLQNLQELFLN 332

Query: 341 RNKFTAYPSGGPTQFTSVYSINFE 364
            N+ ++       +      I FE
Sbjct: 333 NNQLSSQEKKRIRKLIPKCQIYFE 356



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 81/204 (39%), Positives = 121/204 (59%), Gaps = 2/204 (0%)

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           V +++   N+   +P  I  + KNL ++N+  N LT LP ++G    L +LNL  NQI  
Sbjct: 50  VRTLDLSANRFKTLPKEI-GKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKT 108

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + ++I+ L  L+ L L  N L  LP  IG L+ LK L+L  N+++++P EI  L++LQ L
Sbjct: 109 IPKEIEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSL 168

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L +NQL +LP+ IG L NL  L +  N L ++P+EIG L+NL  LYL  N  L  +P E
Sbjct: 169 GLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQ-LTILPNE 227

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    NLQ ++L N  L+ +  EI
Sbjct: 228 IGQLKNLQTLNLRNNRLTTLSKEI 251



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/146 (40%), Positives = 91/146 (62%), Gaps = 1/146 (0%)

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           + L++ +QN + +  L LS N  K LP  IG L+ L+ L+L +N+L  LP EIG LK L+
Sbjct: 38  TDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 97

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
           +L L +NQ+ ++P+ I  L  L +L + +N L ++P+EIG L+NL +L L+ N  +  IP
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQ-IKTIP 156

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEI 561
            E+     LQ + LDN  L+ +P EI
Sbjct: 157 KEIEKLQKLQSLGLDNNQLTTLPQEI 182



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 1/92 (1%)

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
           F+ ELQ    +S     L +A+ +   +  L +  N  +++P+EIG L+NL  L LN N 
Sbjct: 23  FIYELQAEESESGTYTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQ 82

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L  +P E+    NL+ ++L    +  IP EI
Sbjct: 83  -LTILPKEIGQLKNLRKLNLSANQIKTIPKEI 113


>gi|327263157|ref|XP_003216387.1| PREDICTED: protein LAP2-like isoform 1 [Anolis carolinensis]
          Length = 1363

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 192/417 (46%), Gaps = 29/417 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P  +     L I+    N I  +      
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGFSQ 136

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  N L+ LPK +   T L  LDL  NE 
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEF 196

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  L  L    +  NRL  +P  +    HL   +V    + +L +G +S   S+
Sbjct: 197 TEVPEVLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSKNNIETLEEG-ISGCESL 255

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                         G     K L+ + + +N L  
Sbjct: 256 QDLLLSSNSLQQLPES----------------------IGCL---KKLAILKIDENQLMY 290

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    + EL+   N+I  L   +  L N+      +N L +LP  IGN + +  L
Sbjct: 291 LPDSIGGLTSVEELDCSFNEIEALPSSVGQLSNIRTFAADHNFLTQLPPEIGNWKYVTVL 350

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
            L  NKLE LP E+G +++L+ + L  N+L  LP +   L  L+ + + +N  QS P
Sbjct: 351 FLHSNKLEFLPEEMGDMQKLKVINLSDNRLKYLPYSFTKLQQLTAMWLSDN--QSKP 405



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 190/386 (49%), Gaps = 28/386 (7%)

Query: 174 VLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            LD  H  L ++P  ++    +L+ LYL  N+I+ +   +    +L  LS+ DN +  LP
Sbjct: 26  ALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLP 85

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             +  L NL  LD++ N ++E P+ I NC +L  ++   N +  +PD    L+NLT+L L
Sbjct: 86  ASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGFSQLLNLTQLYL 145

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           +   LE +P    +   L    +    L  LP   ++ LT +  + L  N+FT  P    
Sbjct: 146 NDAFLEFLPANFGRLTKLQILELRENQLKMLPK-TMNRLTQLERLDLGSNEFTEVPE--- 201

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                                 +  +   L +  M  N LT +P  +G+   L  L++  
Sbjct: 202 ----------------------VLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSK 239

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N I  L E I    +L+ L+LS+N L++LP SIG L+KL  L ++EN+L  LP+ IG L 
Sbjct: 240 NNIETLEEGISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDENQLMYLPDSIGGLT 299

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            ++ L    N++ +LP ++G L+N+   +   N L  +P EIG  + +  L+L+ N  L 
Sbjct: 300 SVEELDCSFNEIEALPSSVGQLSNIRTFAADHNFLTQLPPEIGNWKYVTVLFLHSNK-LE 358

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIP 558
            +P E+     L++++L +  L  +P
Sbjct: 359 FLPEEMGDMQKLKVINLSDNRLKYLP 384



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 162/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  +G+L+ L  LD+ +N +E+L  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSKNNIETLEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP +IG L  L+ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDENQLMYLPDSIGGLTSVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   SN++  + D+  L+Q+P EI
Sbjct: 308 FNE-IEALPSSVGQLSNIRTFAADHNFLTQLPPEI 341



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 157/310 (50%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   +  L +L  L +  N I  L   +   ++L  L L+ N L++LP+ IG  
Sbjct: 216 GNRLTLIPGFMGSLKHLIYLDVSKNNIETLEEGISGCESLQDLLLSSNSLQQLPESIGCL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L  L +  N+L+ +PD +G L ++  L  S+N +E++P ++ +  ++  F  +   L+
Sbjct: 276 KKLAILKIDENQLMYLPDSIGGLTSVEELDCSFNEIEALPSSVGQLSNIRTFAADHNFLT 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +   +  + L  NK    P   G  Q   V  IN   N++  +PY  F++ +
Sbjct: 336 QLPPE-IGNWKYVTVLFLHSNKLEFLPEEMGDMQKLKV--INLSDNRLKYLPYS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|395833350|ref|XP_003789701.1| PREDICTED: leucine-rich repeat-containing protein 1 [Otolemur
           garnettii]
          Length = 524

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 194/390 (49%), Gaps = 28/390 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + +  +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I
Sbjct: 12  RHVETIDRRHCSLVYVPDEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LPPE+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLT 131

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L ++   L+S+PE +    +L    +    L+ LPD L                     
Sbjct: 132 CLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL--------------------- 170

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
               TQ   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L
Sbjct: 171 ----TQLRRLEELDLGNNEIYNLPESIGA-LFHLKDLWLDGNQLSELPQEIGNLKNLLCL 225

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L +++N+L  LP  I
Sbjct: 226 DVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAI 285

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G    L  L+L  N+LV+LP++IG L  LS  +   N L S+P+EIG   +L    + DN
Sbjct: 286 GDCDSLTELVLTENRLVTLPKSIGKLKKLSNFNADRNKLTSLPKEIGGCSSLTVFCVRDN 345

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L  IP E++  + L ++ +    L  +P
Sbjct: 346 R-LTRIPAEMSQATELHVLDVAGNRLLHLP 374



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 202/435 (46%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++  +D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 7   LWRCNR-HVETIDRRHCSLVYVPDEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N + E+P  +    +L+I     N +  +     
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL+ LS+ D  ++ LP  +G L NL +L+L  N L  LP  +     L  LDL +NE
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + N+P+ +G L +L  L L  N+L  +P+ +    +L   +V    L  LP+ + S LTS
Sbjct: 186 IYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI-SGLTS 244

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ +S                         N ++ IP GI  + K LS + +  N LT
Sbjct: 245 LTDLVIS------------------------QNLLEMIPDGI-GKLKKLSILKVDQNRLT 279

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            LP  +G    LTEL                       VL+ N L  LP SIG L+KL  
Sbjct: 280 QLPEAIGDCDSLTEL-----------------------VLTENRLVTLPKSIGKLKKLSN 316

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
            + + NKL SLP EIG    L    ++ N+L  +P  +   T L  L V  N L  +P  
Sbjct: 317 FNADRNKLTSLPKEIGGCSSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPFS 376

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  L+L+DN
Sbjct: 377 LTALK-LKALWLSDN 390



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/314 (35%), Positives = 165/314 (52%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 84  LVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALFHLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 204 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE +  C  L E  +    L +LP   +  L  ++N    RN
Sbjct: 264 KLKKLSILKVDQNRLTQLPEAIGDCDSLTELVLTENRLVTLPKS-IGKLKKLSNFNADRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K T+ P   GG +  T V+ +    N++ +IP  + S+A  L  +++  N L  LP  L 
Sbjct: 323 KLTSLPKEIGGCSSLT-VFCV--RDNRLTRIPAEM-SQATELHVLDVAGNRLLHLPFSL- 377

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 378 TALKLKALWLSDNQ 391



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 176/375 (46%), Gaps = 79/375 (21%)

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
           +Y  +L  L +  N++RELP +  +L  L  L L+ N ++ LP EI N   LV LD+  N
Sbjct: 33  RYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRN 92

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL--LSS 330
           +   IP+                    +PE++S C  L   +  G  L+ LP+    L +
Sbjct: 93  D---IPE--------------------IPESISFCKALQIADFSGNPLTRLPESFPELQN 129

Query: 331 LT--SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           LT  S+N+I+L            P    ++Y                     NL+ + ++
Sbjct: 130 LTCLSVNDISLQ---------SLPENIGNLY---------------------NLASLELR 159

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
           +NLLT LP  L     L EL+LG N+I  L E I  L +L+ L L  N L +LP  IGNL
Sbjct: 160 ENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNL 219

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
           + L CLD+ EN+LE LP EI  L  L  L++  N L  +P  IG L  LS L V +N L 
Sbjct: 220 KNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLT 279

Query: 509 SIPEEIGTLENLHTLYLNDNTC----------------------LNNIPFELALCSNLQI 546
            +PE IG  ++L  L L +N                        L ++P E+  CS+L +
Sbjct: 280 QLPEAIGDCDSLTELVLTENRLVTLPKSIGKLKKLSNFNADRNKLTSLPKEIGGCSSLTV 339

Query: 547 MSLDNCPLSQIPSEI 561
             + +  L++IP+E+
Sbjct: 340 FCVRDNRLTRIPAEM 354


>gi|365922508|ref|ZP_09446706.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
 gi|364573058|gb|EHM50578.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
          Length = 429

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 127/387 (32%), Positives = 200/387 (51%), Gaps = 26/387 (6%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           +P    +L  L  L L   +L SLP  IG + +LT L L  N L +LP+S+ NL  L+ L
Sbjct: 43  IPRDASELAGLGRLDLSFRRLQSLPDNIGDLIHLTELDLRGNELETLPESIGNLTLLKRL 102

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           DL+ N+L  LP  +  LT L  L   +N++  +   +   + ++ L + DN++  +P  L
Sbjct: 103 DLKWNRLEALPNSLKNLTRLSKLEFGYNQLTRLPETLAGFTQITELDIGDNRLTRVPHYL 162

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
               NL  L+LA N LEELP  +G  T L  L+L  N L  +PD +G L NLT L L  N
Sbjct: 163 SNFTNLTKLNLARNQLEELPAFLGKLTHLTHLNLSANPLKQLPDFIGELTNLTELELYGN 222

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
           +L ++P++LS    L   ++ G  L++LP+    S+ ++ N+++                
Sbjct: 223 QLGTLPDSLSNLHQLYHLDIGGNLLTTLPE----SIGALENLSV---------------- 262

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
                ++  +N++  +P  I    + LS +++  N LT LP      + L+ L+L  N +
Sbjct: 263 -----LDAHNNRLTSLPESI-GNLQRLSCLSLAHNKLTRLPEQTSHLLRLSTLDLSYNNL 316

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
             L + + N   L  L L++N L  LP  IG L +L+ LD+  N L SLP+ +  L +L 
Sbjct: 317 MTLPDFVCNFSRLTNLHLAHNELTMLPMHIGYLGELEILDVSNNDLGSLPDSVAKLDKLT 376

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSV 502
            L L  NQ+  LP+ I +LT+L  L V
Sbjct: 377 TLNLSGNQIPFLPKFIANLTHLCILDV 403



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/352 (33%), Positives = 184/352 (52%), Gaps = 4/352 (1%)

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +   +++ LP  +G+L +L  LDL  N LE LP+ IGN T+L  LDL+
Sbjct: 46  DASELAGLGRLDLSFRRLQSLPDNIGDLIHLTELDLRGNELETLPESIGNLTLLKRLDLK 105

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
            N L  +P+ L NL  L++L   YN+L  +PETL+    + E ++    L+ +P   LS+
Sbjct: 106 WNRLEALPNSLKNLTRLSKLEFGYNQLTRLPETLAGFTQITELDIGDNRLTRVPH-YLSN 164

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
            T++  + L+RN+    P+    + T +  +N   N + ++P        NL+++ +  N
Sbjct: 165 FTNLTKLNLARNQLEELPAF-LGKLTHLTHLNLSANPLKQLP-DFIGELTNLTELELYGN 222

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L +LP  L     L  L++G N ++ L E I  L NL VL   NN L  LP SIGNL++
Sbjct: 223 QLGTLPDSLSNLHQLYHLDIGGNLLTTLPESIGALENLSVLDAHNNRLTSLPESIGNLQR 282

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L CL L  NKL  LP +   L  L  L L  N L++LP  + + + L+ L +  N L  +
Sbjct: 283 LSCLSLAHNKLTRLPEQTSHLLRLSTLDLSYNNLMTLPDFVCNFSRLTNLHLAHNELTML 342

Query: 511 PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           P  IG L  L  L +++N  L ++P  +A    L  ++L    +  +P  I 
Sbjct: 343 PMHIGYLGELEILDVSNND-LGSLPDSVAKLDKLTTLNLSGNQIPFLPKFIA 393



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/382 (32%), Positives = 188/382 (49%), Gaps = 26/382 (6%)

Query: 139 LPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL 198
           +P     +  L  L L+   L SLPD++ +L  L  LDLR N+L  LP  +  LT LK L
Sbjct: 43  IPRDASELAGLGRLDLSFRRLQSLPDNIGDLIHLTELDLRGNELETLPESIGNLTLLKRL 102

Query: 199 YLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
            L++NR++                        LP  L  L  L  L+  +N L  LP+ +
Sbjct: 103 DLKWNRLEA-----------------------LPNSLKNLTRLSKLEFGYNQLTRLPETL 139

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
              T +  LD+  N L  +P  L N  NLT+L L+ N+LE +P  L K  HL   N+   
Sbjct: 140 AGFTQITELDIGDNRLTRVPHYLSNFTNLTKLNLARNQLEELPAFLGKLTHLTHLNLSAN 199

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
            L  LPD  +  LT++  + L  N+    P    +    +Y ++   N +  +P  I   
Sbjct: 200 PLKQLPD-FIGELTNLTELELYGNQLGTLPDS-LSNLHQLYHLDIGGNLLTTLPESI-GA 256

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
            +NLS ++  +N LTSLP  +G    L+ L+L  N++++L E   +L+ L  L LS N L
Sbjct: 257 LENLSVLDAHNNRLTSLPESIGNLQRLSCLSLAHNKLTRLPEQTSHLLRLSTLDLSYNNL 316

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
             LP  + N  +L  L L  N+L  LP  IG+L EL+ L + +N L SLP ++  L  L+
Sbjct: 317 MTLPDFVCNFSRLTNLHLAHNELTMLPMHIGYLGELEILDVSNNDLGSLPDSVAKLDKLT 376

Query: 499 YLSVGENNLQSIPEEIGTLENL 520
            L++  N +  +P+ I  L +L
Sbjct: 377 TLNLSGNQIPFLPKFIANLTHL 398



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 128/370 (34%), Positives = 191/370 (51%), Gaps = 28/370 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS   +  LP ++  L HL EL L GN+L +LP  IG +T L  L L  N L +LP+S
Sbjct: 56  LDLSFRRLQSLPDNIGDLIHLTELDLRGNELETLPESIGNLTLLKRLDLKWNRLEALPNS 115

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L NL +L  L+  +N+L  LP  +   T                        ++ L + D
Sbjct: 116 LKNLTRLSKLEFGYNQLTRLPETLAGFTQ-----------------------ITELDIGD 152

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  +P  L    NL  L+LA N LEELP  +G  T L  L+L  N L  +PD +G L 
Sbjct: 153 NRLTRVPHYLSNFTNLTKLNLARNQLEELPAFLGKLTHLTHLNLSANPLKQLPDFIGELT 212

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NLT L L  N+L ++P++LS    L   ++ G  L++LP+  + +L +++ +    N+ T
Sbjct: 213 NLTELELYGNQLGTLPDSLSNLHQLYHLDIGGNLLTTLPES-IGALENLSVLDAHNNRLT 271

Query: 346 AYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
           + P S G  Q  S  S+   HN++ ++P    S    LS +++  N L +LP  +  +  
Sbjct: 272 SLPESIGNLQRLSCLSL--AHNKLTRLPEQT-SHLLRLSTLDLSYNNLMTLPDFVCNFSR 328

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LT L+L  N+++ L   I  L  LE+L +SNN L  LP S+  L KL  L+L  N++  L
Sbjct: 329 LTNLHLAHNELTMLPMHIGYLGELEILDVSNNDLGSLPDSVAKLDKLTTLNLSGNQIPFL 388

Query: 465 PNEIGFLKEL 474
           P  I  L  L
Sbjct: 389 PKFIANLTHL 398



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 182/362 (50%), Gaps = 7/362 (1%)

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
           + +P    +L  L  L L F R++++  +I  L +L+ L +R N++  LP  +G L  L 
Sbjct: 41  DRIPRDASELAGLGRLDLSFRRLQSLPDNIGDLIHLTELDLRGNELETLPESIGNLTLLK 100

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            LDL  N LE LP  + N T L  L+  +N+L  +P+ L     +T L +  NRL  VP 
Sbjct: 101 RLDLKWNRLEALPNSLKNLTRLSKLEFGYNQLTRLPETLAGFTQITELDIGDNRLTRVPH 160

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            LS   +L + N+    L  LP   L  LT + ++ LS N     P     + T++  + 
Sbjct: 161 YLSNFTNLTKLNLARNQLEELP-AFLGKLTHLTHLNLSANPLKQLPD-FIGELTNLTELE 218

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
              NQ+  +P  + S    L  +++  NLLT+LP  +G    L+ L+   N+++ L E I
Sbjct: 219 LYGNQLGTLPDSL-SNLHQLYHLDIGGNLLTTLPESIGALENLSVLDAHNNRLTSLPESI 277

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            NL  L  L L++N L +LP    +L +L  LDL  N L +LP+ +     L  L L  N
Sbjct: 278 GNLQRLSCLSLAHNKLTRLPEQTSHLLRLSTLDLSYNNLMTLPDFVCNFSRLTNLHLAHN 337

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           +L  LP  IG+L  L  L V  N+L S+P+ +  L+ L TL L+     N IPF     +
Sbjct: 338 ELTMLPMHIGYLGELEILDVSNNDLGSLPDSVAKLDKLTTLNLSG----NQIPFLPKFIA 393

Query: 543 NL 544
           NL
Sbjct: 394 NL 395



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 118/362 (32%), Positives = 170/362 (46%), Gaps = 50/362 (13%)

Query: 225 DNKIRE--LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +N I E  +P +  EL  L  LDL+   L+ LP  IG+   L  LDL+ NEL  +P+ +G
Sbjct: 35  ENNIGEDRIPRDASELAGLGRLDLSFRRLQSLPDNIGDLIHLTELDLRGNELETLPESIG 94

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
           NL  L RL L +NRLE++P +L     L++       L+ LP+ L               
Sbjct: 95  NLTLLKRLDLKWNRLEALPNSLKNLTRLSKLEFGYNQLTRLPETL--------------- 139

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
                       FT +  ++   N++ ++P+   S   NL+K+N+  N L  LP  LG  
Sbjct: 140 ----------AGFTQITELDIGDNRLTRVPH-YLSNFTNLTKLNLARNQLEELPAFLGKL 188

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
             LT LNL  N + +L + I  L NL  L L  N L  LP S+ NL +L  LD+  N L 
Sbjct: 189 THLTHLNLSANPLKQLPDFIGELTNLTELELYGNQLGTLPDSLSNLHQLYHLDIGGNLLT 248

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
           +LP  IG L+ L  L   +N+L SLP +IG+L  LS LS+  N L  +PE+   L  L T
Sbjct: 249 TLPESIGALENLSVLDAHNNRLTSLPESIGNLQRLSCLSLAHNKLTRLPEQTSHLLRLST 308

Query: 523 LYLN--------DNTC--------------LNNIPFELALCSNLQIMSLDNCPLSQIPSE 560
           L L+        D  C              L  +P  +     L+I+ + N  L  +P  
Sbjct: 309 LDLSYNNLMTLPDFVCNFSRLTNLHLAHNELTMLPMHIGYLGELEILDVSNNDLGSLPDS 368

Query: 561 IV 562
           + 
Sbjct: 369 VA 370



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 181/342 (52%), Gaps = 4/342 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL  + +  LP S+  LT L+ L L  N+L +LP+ +  +T L+ L    N LT LP++
Sbjct: 79  LDLRGNELETLPESIGNLTLLKRLDLKWNRLEALPNSLKNLTRLSKLEFGYNQLTRLPET 138

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           LA   Q+  LD+  N+L  +P  +   T+L  L L  N+++ +   +  L++L+ L++  
Sbjct: 139 LAGFTQITELDIGDNRLTRVPHYLSNFTNLTKLNLARNQLEELPAFLGKLTHLTHLNLSA 198

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N +++LP  +GEL NL  L+L  N L  LP  + N   L  LD+  N L  +P+ +G L 
Sbjct: 199 NPLKQLPDFIGELTNLTELELYGNQLGTLPDSLSNLHQLYHLDIGGNLLTTLPESIGALE 258

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL+ L    NRL S+PE++     L+  ++    L+ LP+   S L  ++ + LS N   
Sbjct: 259 NLSVLDAHNNRLTSLPESIGNLQRLSCLSLAHNKLTRLPEQ-TSHLLRLSTLDLSYNNLM 317

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P      F+ + +++  HN++  +P  I      L  +++ +N L SLP  +     L
Sbjct: 318 TLPD-FVCNFSRLTNLHLAHNELTMLPMHI-GYLGELEILDVSNNDLGSLPDSVAKLDKL 375

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
           T LNL  NQI  L + I NL +L +L + N  + K+P ++ N
Sbjct: 376 TTLNLSGNQIPFLPKFIANLTHLCILDVRNTRM-KVPLALAN 416



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 125/223 (56%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L+L+++ +  LP  + KLTHL  L L  N L  LP  IG +TNLT L L  N L +
Sbjct: 167 NLTKLNLARNQLEELPAFLGKLTHLTHLNLSANPLKQLPDFIGELTNLTELELYGNQLGT 226

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LPDSL+NL QL  LD+  N L  LP  +  L +L +L    NR+ ++   I  L  LS L
Sbjct: 227 LPDSLSNLHQLYHLDIGGNLLTTLPESIGALENLSVLDAHNNRLTSLPESIGNLQRLSCL 286

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           S+  NK+  LP +   L  L TLDL++N+L  LP  + N + L  L L HNEL  +P  +
Sbjct: 287 SLAHNKLTRLPEQTSHLLRLSTLDLSYNNLMTLPDFVCNFSRLTNLHLAHNELTMLPMHI 346

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
           G L  L  L +S N L S+P++++K   L   N+ G  +  LP
Sbjct: 347 GYLGELEILDVSNNDLGSLPDSVAKLDKLTTLNLSGNQIPFLP 389



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 115/212 (54%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  ++ +L+LS + +  LP  + +LT+L EL LYGN+L +LP  +  +  L  L +  N 
Sbjct: 187 KLTHLTHLNLSANPLKQLPDFIGELTNLTELELYGNQLGTLPDSLSNLHQLYHLDIGGNL 246

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP+S+  L+ L VLD  +N+L  LP  +  L  L  L L  N++  +     +L  L
Sbjct: 247 LTTLPESIGALENLSVLDAHNNRLTSLPESIGNLQRLSCLSLAHNKLTRLPEQTSHLLRL 306

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
           S L +  N +  LP  +     L  L LAHN L  LP  IG    L  LD+ +N+L ++P
Sbjct: 307 STLDLSYNNLMTLPDFVCNFSRLTNLHLAHNELTMLPMHIGYLGELEILDVSNNDLGSLP 366

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           D +  L  LT L LS N++  +P+ ++   HL
Sbjct: 367 DSVAKLDKLTTLNLSGNQIPFLPKFIANLTHL 398



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 90/185 (48%), Gaps = 24/185 (12%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN+  LD   + +T LP S+  L  L  L L  NKL  LP Q  ++  L+ L L+ N+L 
Sbjct: 258 ENLSVLDAHNNRLTSLPESIGNLQRLSCLSLAHNKLTRLPEQTSHLLRLSTLDLSYNNLM 317

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LPD + N  +L  L L HN+L  LPM                        I YL  L +
Sbjct: 318 TLPDFVCNFSRLTNLHLAHNELTMLPM-----------------------HIGYLGELEI 354

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N +  LP  + +L  L TL+L+ N +  LPK I N T L  LD++ N  + +P  
Sbjct: 355 LDVSNNDLGSLPDSVAKLDKLTTLNLSGNQIPFLPKFIANLTHLCILDVR-NTRMKVPLA 413

Query: 281 LGNLI 285
           L N I
Sbjct: 414 LANRI 418



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C    + NL L+ + +T LP  +  L  LE L +  N L SLP  +  +  LT L L+ N
Sbjct: 324 CNFSRLTNLHLAHNELTMLPMHIGYLGELEILDVSNNDLGSLPDSVAKLDKLTTLNLSGN 383

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVV 189
            +  LP  +ANL  L +LD+R+ ++ ++P+ +
Sbjct: 384 QIPFLPKFIANLTHLCILDVRNTRM-KVPLAL 414


>gi|388452646|ref|NP_001253435.1| leucine-rich repeat-containing protein 1 [Macaca mulatta]
 gi|380784439|gb|AFE64095.1| leucine-rich repeat-containing protein 1 [Macaca mulatta]
          Length = 524

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 194/385 (50%), Gaps = 28/385 (7%)

Query: 175 LDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I+ LPP
Sbjct: 17  IDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPP 76

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT L ++
Sbjct: 77  EIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVN 136

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              L+S+PE +    +L    +    L+ LPD L                         T
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSL-------------------------T 171

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L++  N
Sbjct: 172 QLRRLEELDLGNNEIYNLPESIGALL-HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           ++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L +++N+L  LP  +G  + 
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCES 290

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L  L+L  NQL++LP++IG L  LS L+   N L S+P+EIG   +L    + DN  L  
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNR-LTR 349

Query: 534 IPFELALCSNLQIMSLDNCPLSQIP 558
           IP E++  + L ++ +    L  +P
Sbjct: 350 IPAEMSQATELHVLDVAGNRLLHLP 374



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 207/435 (47%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++ ++D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 7   LWRCNR-HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N++ E+P  +    +L++     N +  +     
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL+ LS+ D  ++ LP  +G L NL +L+L  N L  LP  +     L  LDL +NE
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + N+P+ +G L++L  L L  N+L  +P+ +    +L   +V    L  LP+ + S LTS
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI-SGLTS 244

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ +S+                        N ++ IP GI  + K LS + +  N LT
Sbjct: 245 LTDLVISQ------------------------NLLETIPDGI-GKLKKLSILKVDQNRLT 279

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            LP  +G    LTEL                       VL+ N L  LP SIG L+KL  
Sbjct: 280 QLPEAVGDCESLTEL-----------------------VLTENQLLTLPKSIGKLKKLSN 316

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+ + NKL SLP EIG    L    ++ N+L  +P  +   T L  L V  N L  +P  
Sbjct: 317 LNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLS 376

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  L+L+DN
Sbjct: 377 LTALK-LKALWLSDN 390



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/314 (35%), Positives = 165/314 (52%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 84  LVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 204 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE +  C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 264 KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKS-IGKLKKLSNLNADRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 323 KLVSLPKEIGGCCSLT-VFCV--RDNRLTRIPAEM-SQATELHVLDVAGNRLLHLPLSL- 377

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 378 TALKLKALWLSDNQ 391



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 177/375 (47%), Gaps = 79/375 (21%)

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
           +Y  +L  L +  N++RELP +  +L  L  L L+ N ++ LP EI N   LV LD+  N
Sbjct: 33  RYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRN 92

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL--LSS 330
           E   IP+                    +PE++S C  L   +  G  L+ LP+    L +
Sbjct: 93  E---IPE--------------------IPESISFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 331 LT--SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           LT  S+N+I+L            P    ++Y                     NL+ + ++
Sbjct: 130 LTCLSVNDISLQ---------SLPENIGNLY---------------------NLASLELR 159

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
           +NLLT LP  L     L EL+LG N+I  L E I  L++L+ L L  N L +LP  IGNL
Sbjct: 160 ENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNL 219

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
           + L CLD+ EN+LE LP EI  L  L  L++  N L ++P  IG L  LS L V +N L 
Sbjct: 220 KNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLT 279

Query: 509 SIPEEIGTLENLHTLYLNDNTCLN----------------------NIPFELALCSNLQI 546
            +PE +G  E+L  L L +N  L                       ++P E+  C +L +
Sbjct: 280 QLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339

Query: 547 MSLDNCPLSQIPSEI 561
             + +  L++IP+E+
Sbjct: 340 FCVRDNRLTRIPAEM 354


>gi|355561805|gb|EHH18437.1| hypothetical protein EGK_15027, partial [Macaca mulatta]
          Length = 514

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 194/385 (50%), Gaps = 28/385 (7%)

Query: 175 LDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I+ LPP
Sbjct: 7   IDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPP 66

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT L ++
Sbjct: 67  EIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVN 126

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              L+S+PE +    +L    +    L+ LPD L                         T
Sbjct: 127 DISLQSLPENIGNLYNLASLELRENLLTYLPDSL-------------------------T 161

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L++  N
Sbjct: 162 QLRRLEELDLGNNEIYNLPESIGALL-HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 220

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           ++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L +++N+L  LP  +G  + 
Sbjct: 221 RLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCES 280

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L  L+L  NQL++LP++IG L  LS L+   N L S+P+EIG   +L    + DN  L  
Sbjct: 281 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNR-LTR 339

Query: 534 IPFELALCSNLQIMSLDNCPLSQIP 558
           IP E++  + L ++ +    L  +P
Sbjct: 340 IPAEMSQATELHVLDVAGNRLLHLP 364



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 132/425 (31%), Positives = 203/425 (47%), Gaps = 51/425 (12%)

Query: 105 NLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLP 163
           ++D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LGL++N +  LP
Sbjct: 6   SIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLP 65

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
             +AN  QL  LD+  N++ E+P  +    +L++     N +  +      L NL+ LS+
Sbjct: 66  PEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSV 125

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
            D  ++ LP  +G L NL +L+L  N L  LP  +     L  LDL +NE+ N+P+ +G 
Sbjct: 126 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGA 185

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L++L  L L  N+L  +P+ +    +L   +V    L  LP+ + S LTS+ ++ +S+  
Sbjct: 186 LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI-SGLTSLTDLVISQ-- 242

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
                                 N ++ IP GI  + K LS + +  N LT LP  +G   
Sbjct: 243 ----------------------NLLETIPDGI-GKLKKLSILKVDQNRLTQLPEAVGDCE 279

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            LTEL                       VL+ N L  LP SIG L+KL  L+ + NKL S
Sbjct: 280 SLTEL-----------------------VLTENQLLTLPKSIGKLKKLSNLNADRNKLVS 316

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           LP EIG    L    ++ N+L  +P  +   T L  L V  N L  +P  +  L+ L  L
Sbjct: 317 LPKEIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTALK-LKAL 375

Query: 524 YLNDN 528
           +L+DN
Sbjct: 376 WLSDN 380



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/314 (35%), Positives = 165/314 (52%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 74  LVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 133

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 134 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 193

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 194 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIG 253

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE +  C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 254 KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKS-IGKLKKLSNLNADRN 312

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 313 KLVSLPKEIGGCCSLT-VFCV--RDNRLTRIPAEM-SQATELHVLDVAGNRLLHLPLSL- 367

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 368 TALKLKALWLSDNQ 381



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 177/375 (47%), Gaps = 79/375 (21%)

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
           +Y  +L  L +  N++RELP +  +L  L  L L+ N ++ LP EI N   LV LD+  N
Sbjct: 23  RYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRN 82

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL--LSS 330
           E   IP+                    +PE++S C  L   +  G  L+ LP+    L +
Sbjct: 83  E---IPE--------------------IPESISFCKALQVADFSGNPLTRLPESFPELQN 119

Query: 331 LT--SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           LT  S+N+I+L            P    ++Y                     NL+ + ++
Sbjct: 120 LTCLSVNDISLQ---------SLPENIGNLY---------------------NLASLELR 149

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
           +NLLT LP  L     L EL+LG N+I  L E I  L++L+ L L  N L +LP  IGNL
Sbjct: 150 ENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNL 209

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
           + L CLD+ EN+LE LP EI  L  L  L++  N L ++P  IG L  LS L V +N L 
Sbjct: 210 KNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLT 269

Query: 509 SIPEEIGTLENLHTLYLNDNTCLN----------------------NIPFELALCSNLQI 546
            +PE +G  E+L  L L +N  L                       ++P E+  C +L +
Sbjct: 270 QLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 329

Query: 547 MSLDNCPLSQIPSEI 561
             + +  L++IP+E+
Sbjct: 330 FCVRDNRLTRIPAEM 344



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 125/223 (56%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +L+L ++ +T+LP S+ +L  LEEL L  N++ +LP  IG + +L  L L  N L+ 
Sbjct: 142 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 201

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + NL+ L  LD+  N+L  LP  +  LTSL  L +  N ++T+   I  L  LS+L
Sbjct: 202 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 261

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++ +LP  +G+ ++L  L L  N L  LPK IG    L  L+   N+LV++P  +
Sbjct: 262 KVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 321

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
           G   +LT   +  NRL  +P  +S+   L+  +V G  L  LP
Sbjct: 322 GGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLP 364



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 1/204 (0%)

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           V SI+  H  +  +P  I+  A++L ++ +  N L  LP      V L +L L  N+I +
Sbjct: 4   VESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQR 63

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L  +I N + L  L +S N + ++P SI   + L+  D   N L  LP     L+ L  L
Sbjct: 64  LPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCL 123

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            +    L SLP  IG+L NL+ L + EN L  +P+ +  L  L  L L +N  + N+P  
Sbjct: 124 SVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE-IYNLPES 182

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    +L+ + LD   LS++P EI
Sbjct: 183 IGALLHLKDLWLDGNQLSELPQEI 206



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 11/152 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E++  L L+++ +  LP S+ KL  L  L    NKL SLP +IG   +LT   + +N LT
Sbjct: 279 ESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLT 338

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK---TVHPDIQYLSN 217
            +P  ++   +L VLD+  N+L  LP+ +  L  LK L+L  N+ +   T   D  Y + 
Sbjct: 339 RIPAEMSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDNQSQPLLTFQTDTDYTTG 397

Query: 218 LSMLSM-------RDNKIRELPPELGELKNLV 242
             +L+         +   +E  P  G L+NLV
Sbjct: 398 EKILTCVLLPQLPSEPTCQENLPRCGALENLV 429


>gi|417765447|ref|ZP_12413409.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352384|gb|EJP04580.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 426

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 191/365 (52%), Gaps = 55/365 (15%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LP  + KL +L++L+L  N+L +LP +IG + NL  L L EN LT++P  +  LQ L+ L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           +L HN+L  LP  + +L  L+ LYL  N+  ++  +I  L NL  L +  N++  LP E+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI------------------ 277
           G+L+NL +L L HN L  LPKEIG    L  L L++N+L  +                  
Sbjct: 207 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 278 -----PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
                P+ +G L NL +L+L  N+L ++P+ + +  +L E +++G  L++LP+  +  L 
Sbjct: 267 KLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPEN-IGQLQ 325

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            +  + L  N+    P+    Q  ++ S++ EHNQ                        L
Sbjct: 326 RLQTLYLGNNQLNFLPN-KVEQLQNLESLDLEHNQ------------------------L 360

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS-SIGNLRKL 451
            +LP ++G    L  LNL  NQ++ L E+I+ L NL+ L L NN    LPS  I  +RKL
Sbjct: 361 NALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN---PLPSEKIERIRKL 417

Query: 452 --KCL 454
             +C+
Sbjct: 418 LPQCI 422



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 134/386 (34%), Positives = 212/386 (54%), Gaps = 26/386 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS S +T LP  + KL +L+ L L  N+L +LP +IG + NL  L L++N L 
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L L  N+L  +P  + +L +L+ L L  N++ T+  DI+ L  L  
Sbjct: 109 ALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQT 168

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+   +  E+G+L+NL +L L HN L  LPKEIG    L +L L HN+L  +P  
Sbjct: 169 LYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKE 228

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L ++P+ + +  +L +  +    L++LP+  +  L ++  + L 
Sbjct: 229 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQLQNLQKLKLY 287

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL ++++  N LT+LP ++G
Sbjct: 288 ENQLTTLPKE-------------------------IGQLQNLQELDLDGNQLTTLPENIG 322

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L LG NQ++ L   ++ L NLE L L +N L  LP  IG L+KL+ L+L+ N+
Sbjct: 323 QLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQ 382

Query: 461 LESLPNEIGFLKELQRLILQSNQLVS 486
           L +LP EI  LK L++L L +N L S
Sbjct: 383 LATLPEEIKQLKNLKKLYLHNNPLPS 408



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 134/381 (35%), Positives = 205/381 (53%), Gaps = 26/381 (6%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L G+KL +LP +IG + NL  L L +N L +LP  +  LQ L+ L L  N+L  LP  
Sbjct: 54  LNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMALPEE 113

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +L+ L L  N++  +  +I  L NL  L++  N++  LP ++ +L+ L TL L H
Sbjct: 114 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 173

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N    + KEIG    L +L L HN+L  +P  +G L NL  L L +N+L  +P+ + +  
Sbjct: 174 NQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQ 233

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L   ++    L++LP  +   L ++  + L++NK T  P                    
Sbjct: 234 NLQILHLRNNQLTTLPKEI-GQLQNLQKLLLNKNKLTTLPEE------------------ 274

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
                    + +NL K+ + +N LT+LP ++G    L EL+L  NQ++ L E+I  L  L
Sbjct: 275 -------IGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRL 327

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L L NN L  LP+ +  L+ L+ LDLE N+L +LP EIG L++LQ L L+ NQL +LP
Sbjct: 328 QTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLP 387

Query: 489 RAIGHLTNLSYLSVGENNLQS 509
             I  L NL  L +  N L S
Sbjct: 388 EEIKQLKNLKKLYLHNNPLPS 408



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 208/397 (52%), Gaps = 49/397 (12%)

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           A+    ++ + L N Q +R+L+L  +KL  LP  + KL +L++L L  N++  +  +I  
Sbjct: 34  AQTYYRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGK 93

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL  L +  N++  LP E+G+L+NL  L L  N L  +PKEIG    L  L+L HN+L
Sbjct: 94  LQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQL 153

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+ +  L  L  L L +N+  S+ + + +  +L    ++   L+ LP  +       
Sbjct: 154 ATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI------- 206

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                              Q  ++ S+  +HNQ++ +P  I  + +NL  +++++N LT+
Sbjct: 207 ------------------GQLRNLESLGLDHNQLNVLPKEI-GQLQNLQILHLRNNQLTT 247

Query: 395 LPLDLGTW-------------------VG----LTELNLGTNQISKLSEDIQNLVNLEVL 431
           LP ++G                     +G    L +L L  NQ++ L ++I  L NL+ L
Sbjct: 248 LPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQEL 307

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  LP +IG L++L+ L L  N+L  LPN++  L+ L+ L L+ NQL +LP+ I
Sbjct: 308 DLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEI 367

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G L  L  L++  N L ++PEEI  L+NL  LYL++N
Sbjct: 368 GKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 124/346 (35%), Positives = 191/346 (55%), Gaps = 27/346 (7%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
            N+ +L++  +K+  LP E+G+L+NL  L+L  N L  LPKEIG    L  L L  N+L+
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            +P+ +G L NL +L+L  N+L ++P+ + +  +L E N+    L++LP+ +        
Sbjct: 109 ALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDI-------- 160

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
                             Q   + ++   HNQ + I   I  + +NL  + +  N L  L
Sbjct: 161 -----------------EQLQRLQTLYLGHNQFNSILKEI-GQLQNLESLGLDHNQLNVL 202

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L  L L  NQ++ L ++I  L NL++L L NN L  LP  IG L+ L+ L 
Sbjct: 203 PKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLL 262

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L +NKL +LP EIG L+ LQ+L L  NQL +LP+ IG L NL  L +  N L ++PE IG
Sbjct: 263 LNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIG 322

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L+ L TLYL +N  LN +P ++    NL+ + L++  L+ +P EI
Sbjct: 323 QLQRLQTLYLGNNQ-LNFLPNKVEQLQNLESLDLEHNQLNALPKEI 367



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 148/309 (47%), Gaps = 50/309 (16%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           NI ++L N  N+  L LS ++L ++P  + K  +L   N++   L +LP  +   L ++ 
Sbjct: 40  NITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEI-GKLQNLQ 98

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + LS+N+  A P                             + +NL K+ + +N LT++
Sbjct: 99  QLHLSKNQLMALPEE-------------------------IGQLQNLQKLKLYENQLTAI 133

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L ELNL  NQ++ L EDI+ L  L+ L L +N    +   IG L+ L+ L 
Sbjct: 134 PKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLG 193

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L+ N+L  LP EIG L+ L+ L L  NQL  LP+ IG L NL  L +  N L ++P+EIG
Sbjct: 194 LDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIG 253

Query: 516 -----------------------TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                                   L+NL  L L +N  L  +P E+    NLQ + LD  
Sbjct: 254 QLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGN 312

Query: 553 PLSQIPSEI 561
            L+ +P  I
Sbjct: 313 QLTTLPENI 321


>gi|67970427|dbj|BAE01556.1| unnamed protein product [Macaca fascicularis]
          Length = 518

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 194/385 (50%), Gaps = 28/385 (7%)

Query: 175 LDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I+ LPP
Sbjct: 17  IDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPP 76

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT L ++
Sbjct: 77  EIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVN 136

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              L+S+PE +    +L    +    L+ LPD L                         T
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSL-------------------------T 171

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L++  N
Sbjct: 172 QLRRLEELDLGNNEIYNLPESIGALL-HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           ++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L +++N+L  LP  +G  + 
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCES 290

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L  L+L  NQL++LP++IG L  LS L+   N L S+P+EIG   +L    + DN  L  
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNR-LTR 349

Query: 534 IPFELALCSNLQIMSLDNCPLSQIP 558
           IP E++  + L ++ +    L  +P
Sbjct: 350 IPAEMSQATELHVLDVAGNRLLHLP 374



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 207/435 (47%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++ ++D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 7   LWRCNR-HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N++ E+P  +    +L++     N +  +     
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL+ LS+ D  ++ LP  +G L NL +L+L  N L  LP  +     L  LDL +NE
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + N+P+ +G L++L  L L  N+L  +P+ +    +L   +V    L  LP+ + S LTS
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI-SGLTS 244

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ +S+                        N ++ IP GI  + K LS + +  N LT
Sbjct: 245 LTDLVISQ------------------------NLLETIPDGI-GKLKKLSILKVDQNRLT 279

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            LP  +G    LTEL                       VL+ N L  LP SIG L+KL  
Sbjct: 280 QLPEAVGDCESLTEL-----------------------VLTENQLLTLPKSIGKLKKLSN 316

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+ + NKL SLP EIG    L    ++ N+L  +P  +   T L  L V  N L  +P  
Sbjct: 317 LNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLS 376

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  L+L+DN
Sbjct: 377 LTALK-LKALWLSDN 390



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/314 (35%), Positives = 165/314 (52%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 84  LVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 204 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE +  C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 264 KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKS-IGKLKKLSNLNADRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 323 KLVSLPKEIGGCCSLT-VFCV--RDNRLTRIPAEM-SQATELHVLDVAGNRLLHLPLSL- 377

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 378 TALKLKALWLSDNQ 391



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 168/349 (48%), Gaps = 56/349 (16%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L ELP++      L  L L  NE+  +P  + N + L  L +S N + 
Sbjct: 36  RSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIP 95

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQ 354
            +PE++S C  L   +  G  L+ LP+    L +LT  S+N+I+L            P  
Sbjct: 96  EIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQ---------SLPEN 146

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
             ++Y                     NL+ + +++NLLT LP  L     L EL+LG N+
Sbjct: 147 IGNLY---------------------NLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           I  L E I  L++L+ L L  N L +LP  IGNL+ L CLD+ EN+LE LP EI  L  L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN-- 532
             L++  N L ++P  IG L  LS L V +N L  +PE +G  E+L  L L +N  L   
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLP 305

Query: 533 --------------------NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                               ++P E+  C +L +  + +  L++IP+E+
Sbjct: 306 KSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEM 354


>gi|118103834|ref|XP_429138.2| PREDICTED: protein LAP2 [Gallus gallus]
          Length = 1410

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 130/417 (31%), Positives = 200/417 (47%), Gaps = 29/417 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 65  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 124

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 125 PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 161

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 162 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 221

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + +L  +
Sbjct: 222 KILPKTMSRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIP-GFIGTLKQL 280

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N       G  +   S+  +    N + ++P  I S  K ++ + + +N L  
Sbjct: 281 TYLDVSKNNIEIVEEGI-SGCESLQDLLLSSNSLQQLPETIGS-LKKVTTLKIDENQLIY 338

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G  V + EL+   N+I  L   +  L N+      +N L +LP  IGN + +  L
Sbjct: 339 LPDSIGGLVSVEELDCSFNEIETLPSSVGQLSNIRTFAADHNFLTQLPPEIGNWKYITVL 398

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
            L  NKLE LP E+G +++L+ + L  N+L +LP     L  L+ + + +N  QS P
Sbjct: 399 FLHSNKLEFLPEEMGDMQKLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDN--QSKP 453



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 192/386 (49%), Gaps = 28/386 (7%)

Query: 174 VLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            LD  H  L ++P  ++    +L+ LYL  N+I+ +   +    +L  LS+ DN +  LP
Sbjct: 74  TLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLP 133

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             +  L NL  LD++ N ++E P+ I NC +L  ++   N +  +PD    L+NLT+L L
Sbjct: 134 ASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYL 193

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           +   LE +P    +   L    +    L  LP   +S LT +  + L  N+FT  P    
Sbjct: 194 NDAFLEFLPANFGRLTKLQILELRENQLKILPK-TMSRLTQLERLDLGSNEFTEVPE--- 249

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                                 +  +   L +  M  N LT +P  +GT   LT L++  
Sbjct: 250 ----------------------VLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSK 287

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N I  + E I    +L+ L+LS+N L++LP +IG+L+K+  L ++EN+L  LP+ IG L 
Sbjct: 288 NNIEIVEEGISGCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLIYLPDSIGGLV 347

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            ++ L    N++ +LP ++G L+N+   +   N L  +P EIG  + +  L+L+ N  L 
Sbjct: 348 SVEELDCSFNEIETLPSSVGQLSNIRTFAADHNFLTQLPPEIGNWKYITVLFLHSNK-LE 406

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIP 558
            +P E+     L++++L +  L  +P
Sbjct: 407 FLPEEMGDMQKLKVINLSDNRLKNLP 432



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 160/335 (47%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 82  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 141

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 142 LRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 200

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 201 LPAN-------------------------FGRLTKLQILELRENQLKILPKTMSRLTQLE 235

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG L++L  LD+ +N +E +  
Sbjct: 236 RLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEIVEE 295

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L  ++ L + EN L  +P+ IG L ++  L  +
Sbjct: 296 GISGCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLIYLPDSIGGLVSVEELDCS 355

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   SN++  + D+  L+Q+P EI
Sbjct: 356 FNE-IETLPSSVGQLSNIRTFAADHNFLTQLPPEI 389



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 161/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 144 ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 203

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP +++ L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 204 NFGRLTKLQILELRENQLKILPKTMSRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 263

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   ++L  L L+ N L++LP+ IG+ 
Sbjct: 264 GNRLTLIPGFIGTLKQLTYLDVSKNNIEIVEEGISGCESLQDLLLSSNSLQQLPETIGSL 323

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L+++  L  S+N +E++P ++ +  ++  F  +   L+
Sbjct: 324 KKVTTLKIDENQLIYLPDSIGGLVSVEELDCSFNEIETLPSSVGQLSNIRTFAADHNFLT 383

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +   I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 384 QLPPE-IGNWKYITVLFLHSNKLEFLPEEMGDMQKLKV--INLSDNRLKNLPF-TFTKLQ 439

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 440 QLTAMWLSDN 449


>gi|355748651|gb|EHH53134.1| hypothetical protein EGM_13704 [Macaca fascicularis]
          Length = 524

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 194/385 (50%), Gaps = 28/385 (7%)

Query: 175 LDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I+ LPP
Sbjct: 17  IDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPP 76

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT L ++
Sbjct: 77  EIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVN 136

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              L+S+PE +    +L    +    L+ LPD L                         T
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSL-------------------------T 171

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L++  N
Sbjct: 172 QLRRLEELDLGNNEIYNLPESIGALL-HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           ++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L +++N+L  LP  +G  + 
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCES 290

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L  L+L  NQL++LP++IG L  LS L+   N L S+P+EIG   +L    + DN  L  
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNR-LTR 349

Query: 534 IPFELALCSNLQIMSLDNCPLSQIP 558
           IP E++  + L ++ +    L  +P
Sbjct: 350 IPAEMSQATELHVLDVAGNRLLHLP 374



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 202/424 (47%), Gaps = 51/424 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LGL++N +  LP 
Sbjct: 17  IDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPP 76

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            +AN  QL  LD+  N++ E+P  +    +L++     N +  +      L NL+ LS+ 
Sbjct: 77  EIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVN 136

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           D  ++ LP  +G L NL +L+L  N L  LP  +     L  LDL +NE+ N+P+ +G L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
           ++L  L L  N+L  +P+ +    +L   +V    L  LP+ + S LTS+ ++ +S+   
Sbjct: 197 LHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI-SGLTSLTDLVISQ--- 252

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
                                N ++ IP GI  + K LS + +  N LT LP  +G    
Sbjct: 253 ---------------------NLLETIPDGI-GKLKKLSILKVDQNRLTQLPEAVGDCES 290

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LTEL                       VL+ N L  LP SIG L+KL  L+ + NKL SL
Sbjct: 291 LTEL-----------------------VLTENQLLTLPKSIGKLKKLSNLNADRNKLVSL 327

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P EIG    L    ++ N+L  +P  +   T L  L V  N L  +P  +  L+ L  L+
Sbjct: 328 PKEIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTALK-LKALW 386

Query: 525 LNDN 528
           L+DN
Sbjct: 387 LSDN 390



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 112/314 (35%), Positives = 165/314 (52%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 84  LVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 204 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE +  C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 264 KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKS-IGKLKKLSNLNADRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 323 KLVSLPKEIGGCCSLT-VFCV--RDNRLTRIPAEM-SQATELHVLDVAGNRLLHLPLSL- 377

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 378 TALKLKALWLSDNQ 391



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 177/375 (47%), Gaps = 79/375 (21%)

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
           +Y  +L  L +  N++RELP +  +L  L  L L+ N ++ LP EI N   LV LD+  N
Sbjct: 33  RYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRN 92

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL--LSS 330
           E   IP+                    +PE++S C  L   +  G  L+ LP+    L +
Sbjct: 93  E---IPE--------------------IPESISFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 331 LT--SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           LT  S+N+I+L            P    ++Y                     NL+ + ++
Sbjct: 130 LTCLSVNDISLQ---------SLPENIGNLY---------------------NLASLELR 159

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
           +NLLT LP  L     L EL+LG N+I  L E I  L++L+ L L  N L +LP  IGNL
Sbjct: 160 ENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNL 219

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
           + L CLD+ EN+LE LP EI  L  L  L++  N L ++P  IG L  LS L V +N L 
Sbjct: 220 KNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLT 279

Query: 509 SIPEEIGTLENLHTLYLNDNTCLN----------------------NIPFELALCSNLQI 546
            +PE +G  E+L  L L +N  L                       ++P E+  C +L +
Sbjct: 280 QLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339

Query: 547 MSLDNCPLSQIPSEI 561
             + +  L++IP+E+
Sbjct: 340 FCVRDNRLTRIPAEM 354



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 125/223 (56%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +L+L ++ +T+LP S+ +L  LEEL L  N++ +LP  IG + +L  L L  N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + NL+ L  LD+  N+L  LP  +  LTSL  L +  N ++T+   I  L  LS+L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++ +LP  +G+ ++L  L L  N L  LPK IG    L  L+   N+LV++P  +
Sbjct: 272 KVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 331

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
           G   +LT   +  NRL  +P  +S+   L+  +V G  L  LP
Sbjct: 332 GGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLP 374



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 1/204 (0%)

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           V  I+  H  +  +P  I+  A++L ++ +  N L  LP      V L +L L  N+I +
Sbjct: 14  VGGIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQR 73

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L  +I N + L  L +S N + ++P SI   + L+  D   N L  LP     L+ L  L
Sbjct: 74  LPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCL 133

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            +    L SLP  IG+L NL+ L + EN L  +P+ +  L  L  L L +N  + N+P  
Sbjct: 134 SVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE-IYNLPES 192

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    +L+ + LD   LS++P EI
Sbjct: 193 IGALLHLKDLWLDGNQLSELPQEI 216



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 11/152 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E++  L L+++ +  LP S+ KL  L  L    NKL SLP +IG   +LT   + +N LT
Sbjct: 289 ESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLT 348

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK---TVHPDIQYLSN 217
            +P  ++   +L VLD+  N+L  LP+ +  L  LK L+L  N+ +   T   D  Y + 
Sbjct: 349 RIPAEMSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDNQSQPLLTFQTDTDYTTG 407

Query: 218 LSMLSM-------RDNKIRELPPELGELKNLV 242
             +L+         +   +E  P  G L+NLV
Sbjct: 408 EKILTCVLLPQLPSEPTCQENLPRCGALENLV 439


>gi|327263159|ref|XP_003216388.1| PREDICTED: protein LAP2-like isoform 2 [Anolis carolinensis]
          Length = 1295

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 192/417 (46%), Gaps = 29/417 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P  +     L I+    N I  +      
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGFSQ 136

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  N L+ LPK +   T L  LDL  NE 
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEF 196

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  L  L    +  NRL  +P  +    HL   +V    + +L +G +S   S+
Sbjct: 197 TEVPEVLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSKNNIETLEEG-ISGCESL 255

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                         G     K L+ + + +N L  
Sbjct: 256 QDLLLSSNSLQQLPES----------------------IGCL---KKLAILKIDENQLMY 290

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    + EL+   N+I  L   +  L N+      +N L +LP  IGN + +  L
Sbjct: 291 LPDSIGGLTSVEELDCSFNEIEALPSSVGQLSNIRTFAADHNFLTQLPPEIGNWKYVTVL 350

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
            L  NKLE LP E+G +++L+ + L  N+L  LP +   L  L+ + + +N  QS P
Sbjct: 351 FLHSNKLEFLPEEMGDMQKLKVINLSDNRLKYLPYSFTKLQQLTAMWLSDN--QSKP 405



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 190/386 (49%), Gaps = 28/386 (7%)

Query: 174 VLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            LD  H  L ++P  ++    +L+ LYL  N+I+ +   +    +L  LS+ DN +  LP
Sbjct: 26  ALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLP 85

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             +  L NL  LD++ N ++E P+ I NC +L  ++   N +  +PD    L+NLT+L L
Sbjct: 86  ASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGFSQLLNLTQLYL 145

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           +   LE +P    +   L    +    L  LP   ++ LT +  + L  N+FT  P    
Sbjct: 146 NDAFLEFLPANFGRLTKLQILELRENQLKMLPK-TMNRLTQLERLDLGSNEFTEVPE--- 201

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                                 +  +   L +  M  N LT +P  +G+   L  L++  
Sbjct: 202 ----------------------VLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSK 239

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N I  L E I    +L+ L+LS+N L++LP SIG L+KL  L ++EN+L  LP+ IG L 
Sbjct: 240 NNIETLEEGISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDENQLMYLPDSIGGLT 299

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            ++ L    N++ +LP ++G L+N+   +   N L  +P EIG  + +  L+L+ N  L 
Sbjct: 300 SVEELDCSFNEIEALPSSVGQLSNIRTFAADHNFLTQLPPEIGNWKYVTVLFLHSNK-LE 358

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIP 558
            +P E+     L++++L +  L  +P
Sbjct: 359 FLPEEMGDMQKLKVINLSDNRLKYLP 384



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 162/335 (48%), Gaps = 28/335 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  +G+L+ L  LD+ +N +E+L  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSKNNIETLEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP +IG L  L+ L + EN L  +P+ IG L ++  L  +
Sbjct: 248 GISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDENQLMYLPDSIGGLTSVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  +  +P  +   SN++  + D+  L+Q+P EI
Sbjct: 308 FNE-IEALPSSVGQLSNIRTFAADHNFLTQLPPEI 341



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 157/310 (50%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   +  L +L  L +  N I  L   +   ++L  L L+ N L++LP+ IG  
Sbjct: 216 GNRLTLIPGFMGSLKHLIYLDVSKNNIETLEEGISGCESLQDLLLSSNSLQQLPESIGCL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L  L +  N+L+ +PD +G L ++  L  S+N +E++P ++ +  ++  F  +   L+
Sbjct: 276 KKLAILKIDENQLMYLPDSIGGLTSVEELDCSFNEIEALPSSVGQLSNIRTFAADHNFLT 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +   +  + L  NK    P   G  Q   V  IN   N++  +PY  F++ +
Sbjct: 336 QLPPE-IGNWKYVTVLFLHSNKLEFLPEEMGDMQKLKV--INLSDNRLKYLPYS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401


>gi|326926190|ref|XP_003209287.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like [Meleagris gallopavo]
          Length = 565

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 162/513 (31%), Positives = 255/513 (49%), Gaps = 59/513 (11%)

Query: 92  EKEFLRCKE--ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           EKE L  K   + I  +DL+   +  +PP V  L HLEEL++  N + ++P +I  + N+
Sbjct: 43  EKEALIPKHATDRIFFIDLANKHLQIIPPEVFSLEHLEELHMEKNLIVNIPKEIKLLKNM 102

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILY-LRFNRIKTV 208
             L L  N +  + D L  L+ +  LDL +N L+   ++V  +++L+ L+ LR  +I   
Sbjct: 103 KVLYLDHNRIRDICDELGMLKSILSLDLSNNPLSYSSLLV--ISNLQSLHQLRLYQINLH 160

Query: 209 HPDIQ---YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
              +Q   YL  + +L + DN ++ LP E+  LK L  + L +N  E+ P E+     L 
Sbjct: 161 EIPVQICKYLHLIELLGLSDNNLQCLPKEIVNLKKLKEIYLKNNRFEKFPIELCKNVSLE 220

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
            +DL+ N + +IP+ +G+L NL +L L++N L S+P TL  C  L   ++    L  LP 
Sbjct: 221 IIDLEQNLISHIPEEIGSLTNLVKLFLAFNNLSSIPPTLQHCQKLAVLDLSHNPLHKLP- 279

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGP----------------------TQFTSVYSINF 363
            +L+SLT  + + LS N     P+                         T  TSV  ++ 
Sbjct: 280 PVLNSLTEKSELGLSDNSLEELPAQTGSWTSLTHLYLRNSGLHRVHMSFTSLTSVRVLDL 339

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
             N  D+IP GI S  KNL  +N+ D                       NQI ++  +IQ
Sbjct: 340 SENCFDEIPKGICS-MKNLEILNLDD-----------------------NQIQEIPAEIQ 375

Query: 424 NLVNLEVLVLSNNLLKKLPSSI---GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQ 480
            L NL+ L LS N     P  I   G+L KL     +  KL SLP +I  L+ L+ L ++
Sbjct: 376 ELTNLKCLSLSKNQFNNFPVEIFLVGSLEKLYLGQNKGVKLTSLPEDIIKLQNLKELHIE 435

Query: 481 SNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELAL 540
           +N L  LP A+G LT+L  L    N L+ +PE +G ++ L  L L +N  L+++P +L  
Sbjct: 436 NNCLEYLPPAVGSLTHLRILDCHNNLLKKLPESLGQMQGLQQLLLQNNQ-LSSLPEDLNS 494

Query: 541 CSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYL 573
              LQ++ +D  P++  P E+   G S I++YL
Sbjct: 495 LKQLQVILVDGNPMTDPPIELCCQGTSAILQYL 527



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 112/223 (50%), Gaps = 7/223 (3%)

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK----VNMKDNLLTSLPLDLG 400
           T YP G P  F   + +  +   ++++P       K+ +     +++ +  L  +P ++ 
Sbjct: 15  THYPKGDPIGFEDNHVMTAQEQPVNEVPEKEALIPKHATDRIFFIDLANKHLQIIPPEVF 74

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
           +   L EL++  N I  + ++I+ L N++VL L +N ++ +   +G L+ +  LDL  N 
Sbjct: 75  SLEHLEELHMEKNLIVNIPKEIKLLKNMKVLYLDHNRIRDICDELGMLKSILSLDLSNNP 134

Query: 461 LE-SLPNEIGFLKELQRLILQSNQLVSLPRAI-GHLTNLSYLSVGENNLQSIPEEIGTLE 518
           L  S    I  L+ L +L L    L  +P  I  +L  +  L + +NNLQ +P+EI  L+
Sbjct: 135 LSYSSLLVISNLQSLHQLRLYQINLHEIPVQICKYLHLIELLGLSDNNLQCLPKEIVNLK 194

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L  +YL +N      P EL    +L+I+ L+   +S IP EI
Sbjct: 195 KLKEIYLKNNR-FEKFPIELCKNVSLEIIDLEQNLISHIPEEI 236


>gi|402867304|ref|XP_003897800.1| PREDICTED: leucine-rich repeat-containing protein 1 [Papio anubis]
          Length = 524

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 194/385 (50%), Gaps = 28/385 (7%)

Query: 175 LDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I+ LPP
Sbjct: 17  IDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPP 76

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT L ++
Sbjct: 77  EIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVN 136

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              L+S+PE +    +L    +    L+ LPD L                         T
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSL-------------------------T 171

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L++  N
Sbjct: 172 QLRRLEELDLGNNEIYNLPESIGALL-HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           ++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L +++N+L  LP  +G  + 
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCES 290

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L  L+L  NQL++LP++IG L  LS L+   N L S+P+EIG   +L    + DN  L  
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNR-LTR 349

Query: 534 IPFELALCSNLQIMSLDNCPLSQIP 558
           IP E++  + L ++ +    L  +P
Sbjct: 350 IPAEMSQATELHVLDVAGNRLLHLP 374



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 207/435 (47%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++ ++D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 7   LWRCNR-HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N++ E+P  +    +L++     N +  +     
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL+ LS+ D  ++ LP  +G L NL +L+L  N L  LP  +     L  LDL +NE
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + N+P+ +G L++L  L L  N+L  +P+ +    +L   +V    L  LP+ + S LTS
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI-SGLTS 244

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ +S+                        N ++ IP GI  + K LS + +  N LT
Sbjct: 245 LTDLVISQ------------------------NLLETIPDGI-GKLKKLSILKVDQNRLT 279

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            LP  +G    LTEL                       VL+ N L  LP SIG L+KL  
Sbjct: 280 QLPEAVGDCESLTEL-----------------------VLTENQLLTLPKSIGKLKKLSN 316

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+ + NKL SLP EIG    L    ++ N+L  +P  +   T L  L V  N L  +P  
Sbjct: 317 LNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLS 376

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  L+L+DN
Sbjct: 377 LTALK-LKALWLSDN 390



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/314 (35%), Positives = 165/314 (52%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 84  LVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 204 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE +  C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 264 KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKS-IGKLKKLSNLNADRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 323 KLVSLPKEIGGCCSLT-VFCV--RDNRLTRIPAEM-SQATELHVLDVAGNRLLHLPLSL- 377

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 378 TALKLKALWLSDNQ 391



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 177/375 (47%), Gaps = 79/375 (21%)

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
           +Y  +L  L +  N++RELP +  +L  L  L L+ N ++ LP EI N   LV LD+  N
Sbjct: 33  RYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRN 92

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL--LSS 330
           E   IP+                    +PE++S C  L   +  G  L+ LP+    L +
Sbjct: 93  E---IPE--------------------IPESISFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 331 LT--SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           LT  S+N+I+L            P    ++Y                     NL+ + ++
Sbjct: 130 LTCLSVNDISLQ---------SLPENIGNLY---------------------NLASLELR 159

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
           +NLLT LP  L     L EL+LG N+I  L E I  L++L+ L L  N L +LP  IGNL
Sbjct: 160 ENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNL 219

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
           + L CLD+ EN+LE LP EI  L  L  L++  N L ++P  IG L  LS L V +N L 
Sbjct: 220 KNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLT 279

Query: 509 SIPEEIGTLENLHTLYLNDNTCLN----------------------NIPFELALCSNLQI 546
            +PE +G  E+L  L L +N  L                       ++P E+  C +L +
Sbjct: 280 QLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339

Query: 547 MSLDNCPLSQIPSEI 561
             + +  L++IP+E+
Sbjct: 340 FCVRDNRLTRIPAEM 354


>gi|348529816|ref|XP_003452408.1| PREDICTED: leucine-rich repeat-containing protein 7 [Oreochromis
           niloticus]
          Length = 1645

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 209/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  +      LEELYL  N++  LP Q+     L  L +
Sbjct: 30  FRGEEEVISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSM 89

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L++LP ++A+L  L+ LD+  N + E P  +     L ++    N I  +      
Sbjct: 90  PDNDLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQ 149

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ +PK I   T L  LDL  NE 
Sbjct: 150 LLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEF 209

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L L  N L+++P ++ K   L   ++    + +L D  +S   ++
Sbjct: 210 SEVPEVLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETL-DADISGCEAL 268

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS                                                 N+L  
Sbjct: 269 EDLLLS------------------------------------------------SNMLQH 280

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    LT L +  NQ++ L   I +L  LE L  S N L+ LP +IG L  L+  
Sbjct: 281 LPDSIGMLKKLTTLKVDDNQLTSLPNTIGSLSLLEELDCSCNELESLPPTIGYLHSLRTF 340

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             +EN L  LP EIG  K +  + L+SN+L  LP  IG +T L  L++ +N L+++P   
Sbjct: 341 AADENFLSELPREIGNCKNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTF 400

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L++L  L+L+DN     IP +       +   L N    Q P
Sbjct: 401 TKLKDLAALWLSDNQSKALIPLQTEAHPETKQKVLTNYMFPQQP 444



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 181/368 (49%), Gaps = 51/368 (13%)

Query: 218 LSMLSMRDNKIRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           +S+L      ++++P E+    + L  L L  N +EELPK++ NC  L  L +  N+L N
Sbjct: 37  ISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSN 96

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  + +L+NL  L +S N ++  P+ +  C  L+        ++ LPDG          
Sbjct: 97  LPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGF--------- 147

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
                           TQ  ++  +      ++ +P   F R   L  + +++N L ++P
Sbjct: 148 ----------------TQLLNLTQLFLNDAFLEYLPAN-FGRLSKLRILELRENHLKTMP 190

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +     L  L+LG+N+ S++ E ++ + NL+ L L NN L+ +P SIG LR+L+ LDL
Sbjct: 191 KSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDL 250

Query: 457 EENKLESL-----------------------PNEIGFLKELQRLILQSNQLVSLPRAIGH 493
            +N++E+L                       P+ IG LK+L  L +  NQL SLP  IG 
Sbjct: 251 AKNRIETLDADISGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPNTIGS 310

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L+ L  L    N L+S+P  IG L +L T   ++N  L+ +P E+  C N+ +MSL +  
Sbjct: 311 LSLLEELDCSCNELESLPPTIGYLHSLRTFAADEN-FLSELPREIGNCKNVTVMSLRSNK 369

Query: 554 LSQIPSEI 561
           L  +P EI
Sbjct: 370 LEFLPDEI 377


>gi|198424668|ref|XP_002131394.1| PREDICTED: similar to scribbled CG5462-PH [Ciona intestinalis]
          Length = 1555

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 134/434 (30%), Positives = 218/434 (50%), Gaps = 52/434 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            RC  + I  +D   SS+  +P  V +    LEEL L  N++  LP Q   +  L  LGL
Sbjct: 13  FRCNRQ-IDCIDKRHSSLLVVPEDVLRYARTLEELLLDANQIKDLPKQFFRLVKLRKLGL 71

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           ++N L  +P  +A    L  L++  N + ELP                        +I++
Sbjct: 72  SDNELQKIPADIAQFVYLVDLNISRNDIAELP-----------------------ENIKF 108

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
             +L +L +  N + +LP  + +L  +  L+L    L  +P++IGN + L T++ + N L
Sbjct: 109 CKSLEVLDISGNPLTKLPDGICQLVCMKHLNLNDISLIRMPQDIGNLSKLQTMECRENLL 168

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
            +IP  L ++  L +L L  N LES+P++LS+  +L +  ++G  L+SLPD +   L +I
Sbjct: 169 QSIPYTLCSIGGLEQLDLGNNELESLPDSLSELTNLRDLWLDGNHLTSLPDSI-GKLHNI 227

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + LS NK  + P        S+  +   HN ID +P  I  + K LS + +  N ++ 
Sbjct: 228 VCMDLSENKLESVPET-IGDLHSITDLTLSHNFIDALPESI-GKLKTLSILKVDQNRISK 285

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G W  +TEL                       +L+ NLL +LP+SIGNL+K+  L
Sbjct: 286 LPSSIGDWPNITEL-----------------------MLTENLLTELPASIGNLQKMTTL 322

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           +++ N+LE LP E+G    L  L ++ N L  LP  +G+ TNL  L+V  N L  +P  +
Sbjct: 323 NVDRNQLEVLPPELGKCSSLNILSVRDNMLTYLPTELGNATNLRVLNVSGNRLDCLPISL 382

Query: 515 GTLENLHTLYLNDN 528
            +L+ L  L+L++N
Sbjct: 383 ASLK-LKALWLSEN 395



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 189/377 (50%), Gaps = 29/377 (7%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  + I  LP    +L  L +L L  N+L  +P+ I     L  L ++ N +  LP+++ 
Sbjct: 48  LDANQIKDLPKQFFRLVKLRKLGLSDNELQKIPADIAQFVYLVDLNISRNDIAELPENIK 107

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
             + L VLD+  N L +LP  + +L  +K L L    +  +  DI  LS L  +  R+N 
Sbjct: 108 FCKSLEVLDISGNPLTKLPDGICQLVCMKHLNLNDISLIRMPQDIGNLSKLQTMECRENL 167

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           ++ +P  L  +  L  LDL +N LE LP  +   T L  L L  N L ++PD +G L N+
Sbjct: 168 LQSIPYTLCSIGGLEQLDLGNNELESLPDSLSELTNLRDLWLDGNHLTSLPDSIGKLHNI 227

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             + LS N+LESVPET                        +  L SI ++TLS N   A 
Sbjct: 228 VCMDLSENKLESVPET------------------------IGDLHSITDLTLSHNFIDAL 263

Query: 348 P-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
           P S G  +  S+  ++   N+I K+P  I     N++++ + +NLLT LP  +G    +T
Sbjct: 264 PESIGKLKTLSILKVD--QNRISKLPSSI-GDWPNITELMLTENLLTELPASIGNLQKMT 320

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            LN+  NQ+  L  ++    +L +L + +N+L  LP+ +GN   L+ L++  N+L+ LP 
Sbjct: 321 TLNVDRNQLEVLPPELGKCSSLNILSVRDNMLTYLPTELGNATNLRVLNVSGNRLDCLPI 380

Query: 467 EIGFLKELQRLILQSNQ 483
            +  LK L+ L L  NQ
Sbjct: 381 SLASLK-LKALWLSENQ 396



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 169/361 (46%), Gaps = 51/361 (14%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           + L  L L  N +++LPK+      L  L L  NEL  IP  +   + L  L +S N + 
Sbjct: 41  RTLEELLLDANQIKDLPKQFFRLVKLRKLGLSDNELQKIPADIAQFVYLVDLNISRNDIA 100

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
            +PE +  C  L   ++ G  L+ LPDG+                          Q   +
Sbjct: 101 ELPENIKFCKSLEVLDISGNPLTKLPDGIC-------------------------QLVCM 135

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
             +N     + ++P  I + +K L  +  ++NLL S+P  L +  GL +L+LG N++  L
Sbjct: 136 KHLNLNDISLIRMPQDIGNLSK-LQTMECRENLLQSIPYTLCSIGGLEQLDLGNNELESL 194

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
            + +  L NL  L L  N L  LP SIG L  + C+DL ENKLES+P  IG L  +  L 
Sbjct: 195 PDSLSELTNLRDLWLDGNHLTSLPDSIGKLHNIVCMDLSENKLESVPETIGDLHSITDLT 254

Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN---------- 528
           L  N + +LP +IG L  LS L V +N +  +P  IG   N+  L L +N          
Sbjct: 255 LSHNFIDALPESIGKLKTLSILKVDQNRISKLPSSIGDWPNITELMLTENLLTELPASIG 314

Query: 529 -----TCLN-------NIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
                T LN        +P EL  CS+L I+S+ +  L+ +P+E+   G +  +R L + 
Sbjct: 315 NLQKMTTLNVDRNQLEVLPPELGKCSSLNILSVRDNMLTYLPTEL---GNATNLRVLNVS 371

Query: 577 G 577
           G
Sbjct: 372 G 372



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 195/378 (51%), Gaps = 35/378 (9%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           ++ K+F R  +  +  L LS + +  +P  + +  +L +L +  N +A LP  I +  +L
Sbjct: 55  DLPKQFFRLVK--LRKLGLSDNELQKIPADIAQFVYLVDLNISRNDIAELPENIKFCKSL 112

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
             L ++ N LT LPD +  L  ++ L+L    L  +P  +  L+ L+ +  R N ++++ 
Sbjct: 113 EVLDISGNPLTKLPDGICQLVCMKHLNLNDISLIRMPQDIGNLSKLQTMECRENLLQSIP 172

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
             +  +  L  L + +N++  LP  L EL NL  L L  NHL  LP  IG    +V +DL
Sbjct: 173 YTLCSIGGLEQLDLGNNELESLPDSLSELTNLRDLWLDGNHLTSLPDSIGKLHNIVCMDL 232

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
             N+L ++P+ +G+L ++T L LS+N ++++PE++ K   L+   V+   +S LP    S
Sbjct: 233 SENKLESVPETIGDLHSITDLTLSHNFIDALPESIGKLKTLSILKVDQNRISKLP----S 288

Query: 330 SLTSINNIT---LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
           S+    NIT   L+ N  T  P+        + ++N + NQ++ +P  +  +  +L+ ++
Sbjct: 289 SIGDWPNITELMLTENLLTELPA-SIGNLQKMTTLNVDRNQLEVLPPEL-GKCSSLNILS 346

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           ++DN+LT LP +LG                       N  NL VL +S N L  LP S+ 
Sbjct: 347 VRDNMLTYLPTELG-----------------------NATNLRVLNVSGNRLDCLPISLA 383

Query: 447 NLRKLKCLDLEENKLESL 464
           +L KLK L L EN+ + L
Sbjct: 384 SL-KLKALWLSENQSQPL 400


>gi|307150709|ref|YP_003886093.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
 gi|306980937|gb|ADN12818.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
          Length = 876

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 122/335 (36%), Positives = 184/335 (54%), Gaps = 10/335 (2%)

Query: 87  ADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYV 146
            D  +++   +  EE    LDLS   +  LPP + KLT L  L L  NKL +LPS+IG +
Sbjct: 2   TDEELQQVIQQAIEEKAETLDLSFKKLETLPPEIGKLTALRYLDLRNNKLTTLPSEIGKL 61

Query: 147 TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK 206
            NLT L L +N LT+LP  +  L  L  L L +NKL  LP  + +LT L  LYL  N ++
Sbjct: 62  INLTSLNLTDNQLTALPPEIGKLSNLSRLHLSYNKLTSLPPEIGQLTILCELYLSHNHLE 121

Query: 207 TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
           T+   I+ L ++S LS+  N++  LP  +  L  L  LDL +N L  LP EIG    L  
Sbjct: 122 TLPFTIENLVHISRLSLSYNQLTTLPSAIKGLMRLSWLDLNNNQLTTLPPEIGQLNSLNQ 181

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD- 325
           LD+ +N+L  +P  +G L+NL  + +SYN+L S+P  + + ++L+   +    L+ LP  
Sbjct: 182 LDVGYNQLTTLPPEIGQLLNLISIDVSYNKLTSLPPEIGQLLNLDSLTISNNQLTILPPE 241

Query: 326 -GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
            G LS+L S+N   LS NK ++ P     Q T +  +   HNQ+ ++P  I      L+ 
Sbjct: 242 IGYLSNLISLN---LSYNKLSSLPP-EIGQLTKLIQLRLSHNQLQELPAEI-GHLTQLTS 296

Query: 385 VNMKDNLLTSLPLD---LGTWVGLTELNLGTNQIS 416
           + +K+N L +LP +   L  +  LT+L+L  N +S
Sbjct: 297 LVLKNNQLLTLPFELIQLVQFFKLTQLDLQENLLS 331



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/356 (36%), Positives = 182/356 (51%), Gaps = 31/356 (8%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +   K+  LPPE+G+L  L  LDL +N L  LP EIG    L +L+L  N+L  +P  
Sbjct: 21  LDLSFKKLETLPPEIGKLTALRYLDLRNNKLTTLPSEIGKLINLTSLNLTDNQLTALPPE 80

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL+RL LSYN+L S+P  + +   L E  +    L +LP   + +L  I+ ++LS
Sbjct: 81  IGKLSNLSRLHLSYNKLTSLPPEIGQLTILCELYLSHNHLETLP-FTIENLVHISRLSLS 139

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  PS                                LS +++ +N LT+LP ++G
Sbjct: 140 YNQLTTLPSA-------------------------IKGLMRLSWLDLNNNQLTTLPPEIG 174

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L +L++G NQ++ L  +I  L+NL  + +S N L  LP  IG L  L  L +  N+
Sbjct: 175 QLNSLNQLDVGYNQLTTLPPEIGQLLNLISIDVSYNKLTSLPPEIGQLLNLDSLTISNNQ 234

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L  LP EIG+L  L  L L  N+L SLP  IG LT L  L +  N LQ +P EIG L  L
Sbjct: 235 LTILPPEIGYLSNLISLNLSYNKLSSLPPEIGQLTKLIQLRLSHNQLQELPAEIGHLTQL 294

Query: 521 HTLYLNDNTCLNNIPFEL-ALCSNLQIMSLD-NCPLSQIPSEIVV--GGPSLIIRY 572
            +L L +N  L  +PFEL  L    ++  LD    L  IP EI+     P LI+ +
Sbjct: 295 TSLVLKNNQLL-TLPFELIQLVQFFKLTQLDLQENLLSIPPEIIWRKDEPDLIVNF 349


>gi|45656982|ref|YP_001068.1| hypothetical protein LIC11098 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421087184|ref|ZP_15548025.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421104950|ref|ZP_15565543.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45600219|gb|AAS69705.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410365260|gb|EKP20655.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410430293|gb|EKP74663.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|456983450|gb|EMG19759.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 426

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 118/360 (32%), Positives = 190/360 (52%), Gaps = 53/360 (14%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LP  + KL +L++L+L  N+L +LP +IG + NL  L L EN LT++P  +  LQ L+ L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           +L HN+L  LP  + +L  L+ LYL  N+  ++  +I  L NL  L +  N++  LP E+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI------------------ 277
           G+L+NL +L L HN L  LPKEIG    L  L L++N+L  +                  
Sbjct: 207 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 278 -----PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
                P  +G L NL +L+L  N+L ++P+ + +  +L E +++G  L++LP+ +     
Sbjct: 267 KLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENI----- 321

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
                                Q   + ++   +NQ++ +P  I  + +NL  ++++ N L
Sbjct: 322 --------------------GQLQRLQTLYLGNNQLNFLPKEI-GQLRNLESLDLEHNQL 360

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS-SIGNLRKL 451
            +LP ++G    L  LNL  NQ++ L E+I+ L NL+ L L NN    LPS  I  +RKL
Sbjct: 361 NALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN---PLPSEKIARIRKL 417



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 135/386 (34%), Positives = 212/386 (54%), Gaps = 26/386 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS S +T LP  + KL +L+ L L  N+L +LP +IG + NL  L L++N L 
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L L  N+L  +P  + +L +L+ L L  N++ T+  DI+ L  L  
Sbjct: 109 ALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQT 168

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+   +  E+G+L+NL +L L HN L  LPKEIG    L +L L HN+L  +P  
Sbjct: 169 LYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKE 228

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L ++P+ + +  +L +  +    L++LP   +  L ++  + L 
Sbjct: 229 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKE-IGQLQNLQKLKLY 287

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL ++++  N LT+LP ++G
Sbjct: 288 ENQLTTLPKE-------------------------IGQLQNLQELDLDGNQLTTLPENIG 322

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L LG NQ++ L ++I  L NLE L L +N L  LP  IG L+KL+ L+L+ N+
Sbjct: 323 QLQRLQTLYLGNNQLNFLPKEIGQLRNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQ 382

Query: 461 LESLPNEIGFLKELQRLILQSNQLVS 486
           L +LP EI  LK L++L L +N L S
Sbjct: 383 LATLPEEIKQLKNLKKLYLHNNPLPS 408



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 137/381 (35%), Positives = 205/381 (53%), Gaps = 26/381 (6%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L G+KL +LP +IG + NL  L L +N L +LP  +  LQ L+ L L  N+L  LP  
Sbjct: 54  LNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMALPEE 113

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +L+ L L  N++  +  +I  L NL  L++  N++  LP ++ +L+ L TL L H
Sbjct: 114 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 173

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N    + KEIG    L +L L HN+L  +P  +G L NL  L L +N+L  +P+ + +  
Sbjct: 174 NQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQ 233

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L   ++    L++LP  +   L ++  + L++NK T  P                    
Sbjct: 234 NLQILHLRNNQLTTLPKEI-GQLQNLQKLLLNKNKLTTLPKE------------------ 274

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
                    + +NL K+ + +N LT+LP ++G    L EL+L  NQ++ L E+I  L  L
Sbjct: 275 -------IGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRL 327

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L L NN L  LP  IG LR L+ LDLE N+L +LP EIG L++LQ L L+ NQL +LP
Sbjct: 328 QTLYLGNNQLNFLPKEIGQLRNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLP 387

Query: 489 RAIGHLTNLSYLSVGENNLQS 509
             I  L NL  L +  N L S
Sbjct: 388 EEIKQLKNLKKLYLHNNPLPS 408



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 209/397 (52%), Gaps = 49/397 (12%)

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           A+    ++ ++L N Q +R+L+L  +KL  LP  + KL +L++L L  N++  +  +I  
Sbjct: 34  AQTYYRNITEALKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGK 93

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL  L +  N++  LP E+G+L+NL  L L  N L  +PKEIG    L  L+L HN+L
Sbjct: 94  LQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQL 153

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+ +  L  L  L L +N+  S+ + + +  +L    ++   L+ LP  +       
Sbjct: 154 ATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI------- 206

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                              Q  ++ S+  +HNQ++ +P  I  + +NL  +++++N LT+
Sbjct: 207 ------------------GQLRNLESLGLDHNQLNVLPKEI-GQLQNLQILHLRNNQLTT 247

Query: 395 LPLDLGTW-------------------VG----LTELNLGTNQISKLSEDIQNLVNLEVL 431
           LP ++G                     +G    L +L L  NQ++ L ++I  L NL+ L
Sbjct: 248 LPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQEL 307

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  LP +IG L++L+ L L  N+L  LP EIG L+ L+ L L+ NQL +LP+ I
Sbjct: 308 DLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFLPKEIGQLRNLESLDLEHNQLNALPKEI 367

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G L  L  L++  N L ++PEEI  L+NL  LYL++N
Sbjct: 368 GKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 125/346 (36%), Positives = 191/346 (55%), Gaps = 27/346 (7%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
            N+ +L++  +K+  LP E+G+L+NL  L+L  N L  LPKEIG    L  L L  N+L+
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            +P+ +G L NL +L+L  N+L ++P+ + +  +L E N+    L++LP+ +        
Sbjct: 109 ALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDI-------- 160

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
                             Q   + ++   HNQ + I   I  + +NL  + +  N L  L
Sbjct: 161 -----------------EQLQRLQTLYLGHNQFNSILKEI-GQLQNLESLGLDHNQLNVL 202

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L  L L  NQ++ L ++I  L NL++L L NN L  LP  IG L+ L+ L 
Sbjct: 203 PKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLL 262

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L +NKL +LP EIG L+ LQ+L L  NQL +LP+ IG L NL  L +  N L ++PE IG
Sbjct: 263 LNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIG 322

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L+ L TLYL +N  LN +P E+    NL+ + L++  L+ +P EI
Sbjct: 323 QLQRLQTLYLGNNQ-LNFLPKEIGQLRNLESLDLEHNQLNALPKEI 367



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 147/309 (47%), Gaps = 50/309 (16%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           NI + L N  N+  L LS ++L ++P  + K  +L   N++   L +LP  +   L ++ 
Sbjct: 40  NITEALKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEI-GKLQNLQ 98

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + LS+N+  A P                             + +NL K+ + +N LT++
Sbjct: 99  QLHLSKNQLMALPEE-------------------------IGQLQNLQKLKLYENQLTAI 133

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L ELNL  NQ++ L EDI+ L  L+ L L +N    +   IG L+ L+ L 
Sbjct: 134 PKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLG 193

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L+ N+L  LP EIG L+ L+ L L  NQL  LP+ IG L NL  L +  N L ++P+EIG
Sbjct: 194 LDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIG 253

Query: 516 -----------------------TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                                   L+NL  L L +N  L  +P E+    NLQ + LD  
Sbjct: 254 QLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGN 312

Query: 553 PLSQIPSEI 561
            L+ +P  I
Sbjct: 313 QLTTLPENI 321


>gi|388329668|gb|AFK29223.1| scribbled, partial [Drosophila buzzatii]
          Length = 499

 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 121/336 (36%), Positives = 175/336 (52%), Gaps = 27/336 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL NL  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPNLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EIG    L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIGGMVSLTDLDLAQNLLETLPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + ETL  C ++ E  +    LS LP        SI N+   
Sbjct: 263 ISKLSRLTILKLDQNRLQRLNETLGNCENMQELILTENFLSELP-------ASIGNM--- 312

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
                          T + ++N + N ++ +P  I  +  NL  ++++DN L  LP +LG
Sbjct: 313 ---------------TKLSNLNVDRNALEYLPLEI-GQCSNLGVLSLRDNKLKKLPPELG 356

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
               L  L++  NQ+  L   + NL  L+ + LS N
Sbjct: 357 NCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSEN 391



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 197/383 (51%), Gaps = 12/383 (3%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L+ L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+ + S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETI-SQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIP--YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
                   +++ +  +HNQ+ ++P   G+ ++   L+ +++ +N L  LP ++G  V LT
Sbjct: 192 PYL-GYLPNLHELWLDHNQLQRLPPELGLLTK---LTYLDVSENRLEELPNEIGGMVSLT 247

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
           +L+L  N +  L + I  L  L +L L  N L++L  ++GN   ++ L L EN L  LP 
Sbjct: 248 DLDLAQNLLETLPDGISKLSRLTILKLDQNRLQRLNETLGNCENMQELILTENFLSELPA 307

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            IG + +L  L +  N L  LP  IG  +NL  LS+ +N L+ +P E+G    LH L ++
Sbjct: 308 SIGNMTKLSNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVS 367

Query: 527 DNTCLNNIPFELALCSNLQIMSL 549
            N  L  +P+ L    NLQ+ ++
Sbjct: 368 GNQLL-YLPYSLV---NLQLKAV 386



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 181/376 (48%), Gaps = 27/376 (7%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  + I  LP +  +L  L +L L  N++  LP  I    NL  L ++ N +  +PD + 
Sbjct: 44  LDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIK 103

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
           +LQ L+V D   N + +LP    +L +L +L L    + T+  D   L+ L  L +R+N 
Sbjct: 104 HLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENL 163

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L HN+L  +P  LG L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPNLHELWLDHNQLQRLPPELGLLTKL 223

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
           T L +S NRLE +P  +   V L + ++    L +LPDG +S L+ +  + L +N+    
Sbjct: 224 TYLDVSENRLEELPNEIGGMVSLTDLDLAQNLLETLPDG-ISKLSRLTILKLDQNRLQRL 282

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
                                           +N+ ++ + +N L+ LP  +G    L+ 
Sbjct: 283 -------------------------NETLGNCENMQELILTENFLSELPASIGNMTKLSN 317

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           LN+  N +  L  +I    NL VL L +N LKKLP  +GN   L  LD+  N+L  LP  
Sbjct: 318 LNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYS 377

Query: 468 IGFLKELQRLILQSNQ 483
           +  L +L+ + L  NQ
Sbjct: 378 LVNL-QLKAVWLSENQ 392



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 158/361 (43%), Gaps = 51/361 (14%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           + L  L L  NH+ +LPK       L  L L  NE+  +P  + N  NL  L +S N + 
Sbjct: 37  RTLEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIP 96

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
            +P+ +     L   +     +  LP G  S L ++  + L+    T  P+         
Sbjct: 97  DIPDDIKHLQSLQVADFSSNPIPKLPSGF-SQLKNLTVLGLNDMSLTTLPAD-------- 147

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
                            F     L  + +++NLL  LP  +     L  L+LG N+I  L
Sbjct: 148 -----------------FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDL 190

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
              +  L NL  L L +N L++LP  +G L KL  LD+ EN+LE LPNEIG +  L  L 
Sbjct: 191 PPYLGYLPNLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIGGMVSLTDLD 250

Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN---------- 528
           L  N L +LP  I  L+ L+ L + +N LQ + E +G  EN+  L L +N          
Sbjct: 251 LAQNLLETLPDGISKLSRLTILKLDQNRLQRLNETLGNCENMQELILTENFLSELPASIG 310

Query: 529 ------------TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
                         L  +P E+  CSNL ++SL +  L ++P E+   G   ++  L + 
Sbjct: 311 NMTKLSNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPEL---GNCTVLHVLDVS 367

Query: 577 G 577
           G
Sbjct: 368 G 368


>gi|147857736|emb|CAN78669.1| hypothetical protein VITISV_031289 [Vitis vinifera]
          Length = 1146

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 171/524 (32%), Positives = 250/524 (47%), Gaps = 68/524 (12%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSL-TSL 162
           LDLS +S T H+PP +   + L EL L+ N L  S+P ++G + NL  L L  N L  S+
Sbjct: 78  LDLSSNSFTGHIPPQLGLCSQLLELNLFQNSLSGSIPPELGNLRNLQSLDLGSNFLEGSI 137

Query: 163 PDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSM 220
           P S+ N   L  L +  N L   +P  +  L +L+IL L  N I    P  I  L +L  
Sbjct: 138 PKSICNCTALLGLGIIFNNLTGTIPTDIGNLANLQILVLYSNNIIGPIPVSIGKLGDLQS 197

Query: 221 LSMRDNKIRE-LPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-I 277
           L +  N++   +PPE+G L NL  L L  NHL  ++P E+G C  L+ L+L  N+    I
Sbjct: 198 LDLSINQLSGVMPPEIGNLSNLEYLQLFENHLSGKIPSELGQCKKLIYLNLYSNQFTGGI 257

Query: 278 PDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNV-EGCALSSLPDGLLSSLTSIN 335
           P  LGNL+ L  L+L  NRL S +P +L +  +L    + E   + ++P  L  SL S+ 
Sbjct: 258 PSELGNLVQLVALKLYKNRLNSTIPSSLFQLKYLTHLGISENELIGTIPSEL-GSLRSLQ 316

Query: 336 NITLSRNKFTAYPSGGPTQFT--SVYSINFE---------------------HNQI--DK 370
            +TL  NKFT       T  T  ++ S++F                      HN +    
Sbjct: 317 VLTLHSNKFTGKIPAQITNLTNLTILSMSFNFLTGELPSNIGSLHNLKNLTVHNNLLEGS 376

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTS-LPLDLGTWVGLTELNLGTNQISK-LSEDIQNLVNL 428
           IP  I +   +L  + +  N++T  +P  LG    LT L LG N++S  + +D+ N  NL
Sbjct: 377 IPSSI-TNCTHLVNIGLAYNMITGEIPQGLGQLPNLTFLGLGVNKMSGNIPDDLFNCSNL 435

Query: 429 EVLVLS-------------------------NNLLKKLPSSIGNLRKLKCLDLEENKLE- 462
            +L L+                         N+L+  +P  IGNL +L  L L  N L  
Sbjct: 436 AILDLARNNFSGVLKPGIGKLYNLQRLQAHKNSLVGPIPPEIGNLTQLFSLQLNGNSLSG 495

Query: 463 SLPNEIGFLKELQRLILQSNQL-VSLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENL 520
           ++P E+  L  LQ L L  N L  ++P  I  L +LS L +G+N     IP  +  LE+L
Sbjct: 496 TVPPELSKLSLLQGLYLDDNALEGAIPEEIFELKHLSELGLGDNRFAGHIPHAVSKLESL 555

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLD-NCPLSQIPSEIVV 563
             LYLN N    +IP  +A  S L I+ L  N  +  IP  ++ 
Sbjct: 556 LNLYLNGNVLNGSIPASMARLSRLAILDLSHNHLVGSIPGPVIA 599



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 184/372 (49%), Gaps = 17/372 (4%)

Query: 192 LTSLKILYLRFNRIKT-VHPDIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHN 249
           ++ L++L L  N     + P +   S L  L++  N +   +PPELG L+NL +LDL  N
Sbjct: 72  ISILQVLDLSSNSFTGHIPPQLGLCSQLLELNLFQNSLSGSIPPELGNLRNLQSLDLGSN 131

Query: 250 HLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRL-SYNRLESVPETLSK 306
            LE  +PK I NCT L+ L +  N L   IP  +GNL NL  L L S N +  +P ++ K
Sbjct: 132 FLEGSIPKSICNCTALLGLGIIFNNLTGTIPTDIGNLANLQILVLYSNNIIGPIPVSIGK 191

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
              L   ++    LS +    + +L+++  + L  N  +        Q   +  +N   N
Sbjct: 192 LGDLQSLDLSINQLSGVMPPEIGNLSNLEYLQLFENHLSGKIPSELGQCKKLIYLNLYSN 251

Query: 367 QIDKIPYGIFSRAKNLSKVNM----KDNLLTSLPLDLGTWVGLTELNLGTNQ-ISKLSED 421
           Q      GI S   NL ++      K+ L +++P  L     LT L +  N+ I  +  +
Sbjct: 252 QFTG---GIPSELGNLVQLVALKLYKNRLNSTIPSSLFQLKYLTHLGISENELIGTIPSE 308

Query: 422 IQNLVNLEVLVL-SNNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLIL 479
           + +L +L+VL L SN    K+P+ I NL  L  L +  N L   LP+ IG L  L+ L +
Sbjct: 309 LGSLRSLQVLTLHSNKFTGKIPAQITNLTNLTILSMSFNFLTGELPSNIGSLHNLKNLTV 368

Query: 480 QSNQL-VSLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            +N L  S+P +I + T+L  + +  N +   IP+ +G L NL  L L  N    NIP +
Sbjct: 369 HNNLLEGSIPSSITNCTHLVNIGLAYNMITGEIPQGLGQLPNLTFLGLGVNKMSGNIPDD 428

Query: 538 LALCSNLQIMSL 549
           L  CSNL I+ L
Sbjct: 429 LFNCSNLAILDL 440



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 188/427 (44%), Gaps = 42/427 (9%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
           LP ++  L +L+ L ++ N L  S+PS I   T+L  +GLA N +T  +P  L  L  L 
Sbjct: 353 LPSNIGSLHNLKNLTVHNNLLEGSIPSSITNCTHLVNIGLAYNMITGEIPQGLGQLPNLT 412

Query: 174 VLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTV-HPDIQYLSNLSMLSMRDNK-IRE 230
            L L  NK+   +P  ++  ++L IL L  N    V  P I  L NL  L    N  +  
Sbjct: 413 FLGLGVNKMSGNIPDDLFNCSNLAILDLARNNFSGVLKPGIGKLYNLQRLQAHKNSLVGP 472

Query: 231 LPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLT 288
           +PPE+G L  L +L L  N L   +P E+   ++L  L L  N L   IP+ +  L +L+
Sbjct: 473 IPPEIGNLTQLFSLQLNGNSLSGTVPPELSKLSLLQGLYLDDNALEGAIPEEIFELKHLS 532

Query: 289 RLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            L L  NR    +P  +SK   L    + G  L+      ++ L+ +  + LS N     
Sbjct: 533 ELGLGDNRFAGHIPHAVSKLESLLNLYLNGNVLNGSIPASMARLSRLAILDLSHNHLVGS 592

Query: 348 PSG---GPTQFTSVYSINFEHNQIDK-IPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTW 402
             G      +   +Y +NF HN +   IP  I  + + +  V+M +N L+ S+P  L   
Sbjct: 593 IPGPVIASMKNMQIY-LNFSHNFLSGPIPDEI-GKLEMVQIVDMSNNNLSGSIPETLQGC 650

Query: 403 VGLTELNLGTNQISK--------------------------LSEDIQNLVNLEVLVLSNN 436
             L  L+L  N++S                           L   + N+ NL  L LS N
Sbjct: 651 RNLFNLDLSVNELSGPVPEKAFAQMDVLTSLNLSRNNLNGGLPGSLANMKNLSSLDLSQN 710

Query: 437 LLKKL-PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
             K + P S  N+  LK L+L  N+LE    E G  K +    L  N  +   + +G   
Sbjct: 711 KFKGMIPESYANISTLKQLNLSFNQLEGRVPETGIFKNVSASSLVGNPGLCGTKFLGSCR 770

Query: 496 NLSYLSV 502
           N S+L+ 
Sbjct: 771 NKSHLAA 777



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 82/188 (43%), Gaps = 41/188 (21%)

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
           W G+T  +L +N +            + V ++   L  ++   +GN+  L+ LDL  N  
Sbjct: 39  WSGIT-CDLSSNHV------------ISVSLMEKQLAGQISPFLGNISILQVLDLSSNSF 85

Query: 462 E-------------------------SLPNEIGFLKELQRLILQSNQL-VSLPRAIGHLT 495
                                     S+P E+G L+ LQ L L SN L  S+P++I + T
Sbjct: 86  TGHIPPQLGLCSQLLELNLFQNSLSGSIPPELGNLRNLQSLDLGSNFLEGSIPKSICNCT 145

Query: 496 NLSYLSVGENNLQ-SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
            L  L +  NNL  +IP +IG L NL  L L  N  +  IP  +    +LQ + L    L
Sbjct: 146 ALLGLGIIFNNLTGTIPTDIGNLANLQILVLYSNNIIGPIPVSIGKLGDLQSLDLSINQL 205

Query: 555 SQI-PSEI 561
           S + P EI
Sbjct: 206 SGVMPPEI 213


>gi|114607924|ref|XP_001156152.1| PREDICTED: leucine-rich repeat-containing protein 1 isoform 1 [Pan
           troglodytes]
 gi|297678399|ref|XP_002817063.1| PREDICTED: leucine-rich repeat-containing protein 1 [Pongo abelii]
 gi|397517578|ref|XP_003828986.1| PREDICTED: leucine-rich repeat-containing protein 1 [Pan paniscus]
 gi|426353583|ref|XP_004044270.1| PREDICTED: leucine-rich repeat-containing protein 1 [Gorilla
           gorilla gorilla]
 gi|410213308|gb|JAA03873.1| leucine rich repeat containing 1 [Pan troglodytes]
 gi|410257926|gb|JAA16930.1| leucine rich repeat containing 1 [Pan troglodytes]
 gi|410336559|gb|JAA37226.1| leucine rich repeat containing 1 [Pan troglodytes]
          Length = 524

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 194/385 (50%), Gaps = 28/385 (7%)

Query: 175 LDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I+ LPP
Sbjct: 17  IDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPP 76

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT L ++
Sbjct: 77  EIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVN 136

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              L+S+PE +    +L    +    L+ LPD L                         T
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSL-------------------------T 171

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L++  N
Sbjct: 172 QLRRLEELDLGNNEIYNLPESIGALL-HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           ++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L +++N+L  LP  +G  + 
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCES 290

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L  L+L  NQL++LP++IG L  LS L+   N L S+P+EIG   +L    + DN  L  
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNR-LTR 349

Query: 534 IPFELALCSNLQIMSLDNCPLSQIP 558
           IP E++  + L ++ +    L  +P
Sbjct: 350 IPAEVSQATELHVLDVAGNRLLHLP 374



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 207/435 (47%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++ ++D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 7   LWRCNR-HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N++ E+P  +    +L++     N +  +     
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL+ LS+ D  ++ LP  +G L NL +L+L  N L  LP  +     L  LDL +NE
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + N+P+ +G L++L  L L  N+L  +P+ +    +L   +V    L  LP+ + S LTS
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI-SGLTS 244

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ +S+                        N ++ IP GI  + K LS + +  N LT
Sbjct: 245 LTDLVISQ------------------------NLLETIPDGI-GKLKKLSILKVDQNRLT 279

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            LP  +G    LTEL                       VL+ N L  LP SIG L+KL  
Sbjct: 280 QLPEAVGDCESLTEL-----------------------VLTENQLLTLPKSIGKLKKLSN 316

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+ + NKL SLP EIG    L    ++ N+L  +P  +   T L  L V  N L  +P  
Sbjct: 317 LNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLS 376

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  L+L+DN
Sbjct: 377 LTALK-LKALWLSDN 390



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/314 (35%), Positives = 165/314 (52%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 84  LVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 204 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE +  C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 264 KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKS-IGKLKKLSNLNADRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 323 KLVSLPKEIGGCCSLT-VFCV--RDNRLTRIPAEV-SQATELHVLDVAGNRLLHLPLSL- 377

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 378 TALKLKALWLSDNQ 391



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 177/375 (47%), Gaps = 79/375 (21%)

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
           +Y  +L  L +  N++RELP +  +L  L  L L+ N ++ LP EI N   LV LD+  N
Sbjct: 33  RYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRN 92

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL--LSS 330
           E   IP+                    +PE++S C  L   +  G  L+ LP+    L +
Sbjct: 93  E---IPE--------------------IPESISFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 331 LT--SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           LT  S+N+I+L            P    ++Y                     NL+ + ++
Sbjct: 130 LTCLSVNDISLQ---------SLPENIGNLY---------------------NLASLELR 159

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
           +NLLT LP  L     L EL+LG N+I  L E I  L++L+ L L  N L +LP  IGNL
Sbjct: 160 ENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNL 219

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
           + L CLD+ EN+LE LP EI  L  L  L++  N L ++P  IG L  LS L V +N L 
Sbjct: 220 KNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLT 279

Query: 509 SIPEEIGTLENLHTLYLNDNTCLN----------------------NIPFELALCSNLQI 546
            +PE +G  E+L  L L +N  L                       ++P E+  C +L +
Sbjct: 280 QLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339

Query: 547 MSLDNCPLSQIPSEI 561
             + +  L++IP+E+
Sbjct: 340 FCVRDNRLTRIPAEV 354


>gi|359483612|ref|XP_002272319.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           FLS2-like [Vitis vinifera]
          Length = 1146

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 171/524 (32%), Positives = 250/524 (47%), Gaps = 68/524 (12%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSL-TSL 162
           LDLS +S T H+PP +   + L EL L+ N L  S+P ++G + NL  L L  N L  S+
Sbjct: 78  LDLSSNSFTGHIPPQLGLCSQLLELNLFQNSLSGSIPPELGNLRNLQSLDLGSNFLEGSI 137

Query: 163 PDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSM 220
           P S+ N   L  L +  N L   +P  +  L +L+IL L  N I    P  I  L +L  
Sbjct: 138 PKSICNCTALLGLGIIFNNLTGTIPTDIGNLANLQILVLYSNNIIGPIPVSIGKLGDLQS 197

Query: 221 LSMRDNKIRE-LPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-I 277
           L +  N++   +PPE+G L NL  L L  NHL  ++P E+G C  L+ L+L  N+    I
Sbjct: 198 LDLSINQLSGVMPPEIGNLSNLEYLQLFENHLSGKIPSELGQCKKLIYLNLYSNQFTGGI 257

Query: 278 PDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNV-EGCALSSLPDGLLSSLTSIN 335
           P  LGNL+ L  L+L  NRL S +P +L +  +L    + E   + ++P  L  SL S+ 
Sbjct: 258 PSELGNLVQLVALKLYKNRLNSTIPSSLFQLKYLTHLGISENELIGTIPSEL-GSLRSLQ 316

Query: 336 NITLSRNKFTAYPSGGPTQFT--SVYSINFE---------------------HNQI--DK 370
            +TL  NKFT       T  T  ++ S++F                      HN +    
Sbjct: 317 VLTLHSNKFTGKIPAQITNLTNLTILSMSFNFLTGELPSNIGSLHNLKNLTVHNNLLEGS 376

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTS-LPLDLGTWVGLTELNLGTNQISK-LSEDIQNLVNL 428
           IP  I +   +L  + +  N++T  +P  LG    LT L LG N++S  + +D+ N  NL
Sbjct: 377 IPSSI-TNCTHLVNIGLAYNMITGEIPQGLGQLPNLTFLGLGVNKMSGNIPDDLFNCSNL 435

Query: 429 EVLVLS-------------------------NNLLKKLPSSIGNLRKLKCLDLEENKLE- 462
            +L L+                         N+L+  +P  IGNL +L  L L  N L  
Sbjct: 436 AILDLARNNFSGVLKPGIGKLYNLQRLQAHKNSLVGPIPPEIGNLTQLFSLQLNGNSLSG 495

Query: 463 SLPNEIGFLKELQRLILQSNQL-VSLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENL 520
           ++P E+  L  LQ L L  N L  ++P  I  L +LS L +G+N     IP  +  LE+L
Sbjct: 496 TVPPELSKLSLLQGLYLDDNALEGAIPEEIFELKHLSELGLGDNRFAGHIPHAVSKLESL 555

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLD-NCPLSQIPSEIVV 563
             LYLN N    +IP  +A  S L I+ L  N  +  IP  ++ 
Sbjct: 556 LNLYLNGNVLNGSIPASMARLSRLAILDLSHNHLVGSIPGPVIA 599



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 184/372 (49%), Gaps = 17/372 (4%)

Query: 192 LTSLKILYLRFNRIKT-VHPDIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHN 249
           ++ L++L L  N     + P +   S L  L++  N +   +PPELG L+NL +LDL  N
Sbjct: 72  ISILQVLDLSSNSFTGHIPPQLGLCSQLLELNLFQNSLSGSIPPELGNLRNLQSLDLGSN 131

Query: 250 HLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRL-SYNRLESVPETLSK 306
            LE  +PK I NCT L+ L +  N L   IP  +GNL NL  L L S N +  +P ++ K
Sbjct: 132 FLEGSIPKSICNCTALLGLGIIFNNLTGTIPTDIGNLANLQILVLYSNNIIGPIPVSIGK 191

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
              L   ++    LS +    + +L+++  + L  N  +        Q   +  +N   N
Sbjct: 192 LGDLQSLDLSINQLSGVMPPEIGNLSNLEYLQLFENHLSGKIPSELGQCKKLIYLNLYSN 251

Query: 367 QIDKIPYGIFSRAKNLSKVNM----KDNLLTSLPLDLGTWVGLTELNLGTNQ-ISKLSED 421
           Q      GI S   NL ++      K+ L +++P  L     LT L +  N+ I  +  +
Sbjct: 252 QFTG---GIPSELGNLVQLVALKLYKNRLNSTIPSSLFQLKYLTHLGISENELIGTIPSE 308

Query: 422 IQNLVNLEVLVL-SNNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLIL 479
           + +L +L+VL L SN    K+P+ I NL  L  L +  N L   LP+ IG L  L+ L +
Sbjct: 309 LGSLRSLQVLTLHSNKFTGKIPAQITNLTNLTILSMSFNFLTGELPSNIGSLHNLKNLTV 368

Query: 480 QSNQL-VSLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            +N L  S+P +I + T+L  + +  N +   IP+ +G L NL  L L  N    NIP +
Sbjct: 369 HNNLLEGSIPSSITNCTHLVNIGLAYNMITGEIPQGLGQLPNLTFLGLGVNKMSGNIPDD 428

Query: 538 LALCSNLQIMSL 549
           L  CSNL I+ L
Sbjct: 429 LFNCSNLAILDL 440



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 188/427 (44%), Gaps = 42/427 (9%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
           LP ++  L +L+ L ++ N L  S+PS I   T+L  +GLA N +T  +P  L  L  L 
Sbjct: 353 LPSNIGSLHNLKNLTVHNNLLEGSIPSSITNCTHLVNIGLAYNMITGEIPQGLGQLPNLT 412

Query: 174 VLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTV-HPDIQYLSNLSMLSMRDNK-IRE 230
            L L  NK+   +P  ++  ++L IL L  N    V  P I  L NL  L    N  +  
Sbjct: 413 FLGLGVNKMSGNIPDDLFNCSNLAILDLARNNFSGVLKPGIGKLYNLQRLQAHKNSLVGP 472

Query: 231 LPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLT 288
           +PPE+G L  L +L L  N L   +P E+   ++L  L L  N L   IP+ +  L +L+
Sbjct: 473 IPPEIGNLTQLFSLQLNGNSLSGTVPPELSKLSLLQGLYLDDNALEGAIPEEIFELKHLS 532

Query: 289 RLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            L L  NR    +P  +SK   L    + G  L+      ++ L+ +  + LS N     
Sbjct: 533 ELGLGDNRFAGHIPHAVSKLESLLNLYLNGNVLNGSIPASMARLSRLAILDLSHNHLVGS 592

Query: 348 PSG---GPTQFTSVYSINFEHNQIDK-IPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTW 402
             G      +   +Y +NF HN +   IP  I  + + +  V+M +N L+ S+P  L   
Sbjct: 593 IPGPVIASMKNMQIY-LNFSHNFLSGPIPDEI-GKLEMVQVVDMSNNNLSGSIPETLQGC 650

Query: 403 VGLTELNLGTNQISK--------------------------LSEDIQNLVNLEVLVLSNN 436
             L  L+L  N++S                           L   + N+ NL  L LS N
Sbjct: 651 RNLFNLDLSVNELSGPVPEKAFAQMDVLTSLNLSRNNLNGGLPGSLANMKNLSSLDLSQN 710

Query: 437 LLKKL-PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
             K + P S  N+  LK L+L  N+LE    E G  K +    L  N  +   + +G   
Sbjct: 711 KFKGMIPESYANISTLKQLNLSFNQLEGRVPETGIFKNVSASSLVGNPGLCGTKFLGSCR 770

Query: 496 NLSYLSV 502
           N S+L+ 
Sbjct: 771 NKSHLAA 777



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 82/188 (43%), Gaps = 41/188 (21%)

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
           W G+T  +L +N +            + V ++   L  ++   +GN+  L+ LDL  N  
Sbjct: 39  WSGIT-CDLSSNHV------------ISVSLMEKQLAGQISPFLGNISILQVLDLSSNSF 85

Query: 462 E-------------------------SLPNEIGFLKELQRLILQSNQL-VSLPRAIGHLT 495
                                     S+P E+G L+ LQ L L SN L  S+P++I + T
Sbjct: 86  TGHIPPQLGLCSQLLELNLFQNSLSGSIPPELGNLRNLQSLDLGSNFLEGSIPKSICNCT 145

Query: 496 NLSYLSVGENNLQ-SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
            L  L +  NNL  +IP +IG L NL  L L  N  +  IP  +    +LQ + L    L
Sbjct: 146 ALLGLGIIFNNLTGTIPTDIGNLANLQILVLYSNNIIGPIPVSIGKLGDLQSLDLSINQL 205

Query: 555 SQI-PSEI 561
           S + P EI
Sbjct: 206 SGVMPPEI 213


>gi|418723960|ref|ZP_13282794.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409962758|gb|EKO26492.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 426

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 190/365 (52%), Gaps = 55/365 (15%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LP  + KL +L++L+L  N+L +LP +IG + NL  L L EN LT++P  +  LQ L+ L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           +L HN+L  LP  + +L  L+ LYL  N+  ++  +I  L NL  L +  N++  LP E+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI------------------ 277
           G+L+NL +L L HN L  LPKEIG    L  L L++N+L  +                  
Sbjct: 207 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 278 -----PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
                P+ +G L NL +L+L  N+L ++P+ + +  +L E +++G  L +LP+  +  L 
Sbjct: 267 KLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPEN-IGQLQ 325

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            +  + L  N+    P+    Q  ++ S++ EHNQ                        L
Sbjct: 326 RLQTLYLGNNQLNFLPN-KVEQLQNLESLDLEHNQ------------------------L 360

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS-SIGNLRKL 451
            +LP ++G    L  LNL  NQ++ L E+I+ L NL+ L L NN    LPS  I  +RKL
Sbjct: 361 NALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN---PLPSEKIARIRKL 417

Query: 452 --KCL 454
             +C+
Sbjct: 418 LPQCI 422



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 133/386 (34%), Positives = 211/386 (54%), Gaps = 26/386 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS S +T LP  + KL +L+ L L  N+L +LP +IG + NL  L L++N L 
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L L  N+L  +P  + +L +L+ L L  N++ T+  DI+ L  L  
Sbjct: 109 ALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQT 168

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+   +  E+G+L+NL +L L HN L  LPKEIG    L +L L HN+L  +P  
Sbjct: 169 LYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKE 228

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L ++P+ + +  +L +  +    L++LP+  +  L ++  + L 
Sbjct: 229 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQLQNLQKLKLY 287

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL ++++  N L +LP ++G
Sbjct: 288 ENQLTTLPKE-------------------------IGQLQNLQELDLDGNQLITLPENIG 322

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L LG NQ++ L   ++ L NLE L L +N L  LP  IG L+KL+ L+L+ N+
Sbjct: 323 QLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQ 382

Query: 461 LESLPNEIGFLKELQRLILQSNQLVS 486
           L +LP EI  LK L++L L +N L S
Sbjct: 383 LATLPEEIKQLKNLKKLYLHNNPLPS 408



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 134/381 (35%), Positives = 204/381 (53%), Gaps = 26/381 (6%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L G+KL +LP +IG + NL  L L +N L +LP  +  LQ L+ L L  N+L  LP  
Sbjct: 54  LNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMALPEE 113

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +L+ L L  N++  +  +I  L NL  L++  N++  LP ++ +L+ L TL L H
Sbjct: 114 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 173

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N    + KEIG    L +L L HN+L  +P  +G L NL  L L +N+L  +P+ + +  
Sbjct: 174 NQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQ 233

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L   ++    L++LP  +   L ++  + L++NK T  P                    
Sbjct: 234 NLQILHLRNNQLTTLPKEI-GQLQNLQKLLLNKNKLTTLPEE------------------ 274

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
                    + +NL K+ + +N LT+LP ++G    L EL+L  NQ+  L E+I  L  L
Sbjct: 275 -------IGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRL 327

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L L NN L  LP+ +  L+ L+ LDLE N+L +LP EIG L++LQ L L+ NQL +LP
Sbjct: 328 QTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLP 387

Query: 489 RAIGHLTNLSYLSVGENNLQS 509
             I  L NL  L +  N L S
Sbjct: 388 EEIKQLKNLKKLYLHNNPLPS 408



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 208/397 (52%), Gaps = 49/397 (12%)

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           A+    ++ + L N Q +R+L+L  +KL  LP  + KL +L++L L  N++  +  +I  
Sbjct: 34  AQTYYRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGK 93

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL  L +  N++  LP E+G+L+NL  L L  N L  +PKEIG    L  L+L HN+L
Sbjct: 94  LQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQL 153

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+ +  L  L  L L +N+  S+ + + +  +L    ++   L+ LP  +       
Sbjct: 154 ATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI------- 206

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                              Q  ++ S+  +HNQ++ +P  I  + +NL  +++++N LT+
Sbjct: 207 ------------------GQLRNLESLGLDHNQLNVLPKEI-GQLQNLQILHLRNNQLTT 247

Query: 395 LPLDLGTW-------------------VG----LTELNLGTNQISKLSEDIQNLVNLEVL 431
           LP ++G                     +G    L +L L  NQ++ L ++I  L NL+ L
Sbjct: 248 LPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQEL 307

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  LP +IG L++L+ L L  N+L  LPN++  L+ L+ L L+ NQL +LP+ I
Sbjct: 308 DLDGNQLITLPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEI 367

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G L  L  L++  N L ++PEEI  L+NL  LYL++N
Sbjct: 368 GKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 124/346 (35%), Positives = 191/346 (55%), Gaps = 27/346 (7%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
            N+ +L++  +K+  LP E+G+L+NL  L+L  N L  LPKEIG    L  L L  N+L+
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            +P+ +G L NL +L+L  N+L ++P+ + +  +L E N+    L++LP+ +        
Sbjct: 109 ALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDI-------- 160

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
                             Q   + ++   HNQ + I   I  + +NL  + +  N L  L
Sbjct: 161 -----------------EQLQRLQTLYLGHNQFNSILKEI-GQLQNLESLGLDHNQLNVL 202

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L  L L  NQ++ L ++I  L NL++L L NN L  LP  IG L+ L+ L 
Sbjct: 203 PKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLL 262

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L +NKL +LP EIG L+ LQ+L L  NQL +LP+ IG L NL  L +  N L ++PE IG
Sbjct: 263 LNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIG 322

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L+ L TLYL +N  LN +P ++    NL+ + L++  L+ +P EI
Sbjct: 323 QLQRLQTLYLGNNQ-LNFLPNKVEQLQNLESLDLEHNQLNALPKEI 367



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 147/309 (47%), Gaps = 50/309 (16%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           NI ++L N  N+  L LS ++L ++P  + K  +L   N++   L +LP  +   L ++ 
Sbjct: 40  NITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEI-GKLQNLQ 98

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + LS+N+  A P                             + +NL K+ + +N LT++
Sbjct: 99  QLHLSKNQLMALPEE-------------------------IGQLQNLQKLKLYENQLTAI 133

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L ELNL  NQ++ L EDI+ L  L+ L L +N    +   IG L+ L+ L 
Sbjct: 134 PKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLG 193

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L+ N+L  LP EIG L+ L+ L L  NQL  LP+ IG L NL  L +  N L ++P+EIG
Sbjct: 194 LDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIG 253

Query: 516 -----------------------TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                                   L+NL  L L +N  L  +P E+    NLQ + LD  
Sbjct: 254 QLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGN 312

Query: 553 PLSQIPSEI 561
            L  +P  I
Sbjct: 313 QLITLPENI 321


>gi|95113664|ref|NP_060684.4| leucine-rich repeat-containing protein 1 [Homo sapiens]
 gi|50401149|sp|Q9BTT6.1|LRRC1_HUMAN RecName: Full=Leucine-rich repeat-containing protein 1; AltName:
           Full=LANO adapter protein; AltName: Full=LAP and no PDZ
           protein
 gi|14582756|gb|AAK69623.1|AF332199_1 leucine-rich repeats protein [Homo sapiens]
 gi|14701834|gb|AAK72246.1|AF359380_1 LANO adaptor protein [Homo sapiens]
 gi|13112035|gb|AAH03193.1| Leucine rich repeat containing 1 [Homo sapiens]
 gi|119624835|gb|EAX04430.1| leucine rich repeat containing 1, isoform CRA_b [Homo sapiens]
 gi|157928286|gb|ABW03439.1| leucine rich repeat containing 1 [synthetic construct]
          Length = 524

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 194/385 (50%), Gaps = 28/385 (7%)

Query: 175 LDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I+ LPP
Sbjct: 17  IDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPP 76

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT L ++
Sbjct: 77  EIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVN 136

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              L+S+PE +    +L    +    L+ LPD L                         T
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSL-------------------------T 171

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L++  N
Sbjct: 172 QLRRLEELDLGNNEIYNLPESIGALL-HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           ++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L +++N+L  LP  +G  + 
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECES 290

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L  L+L  NQL++LP++IG L  LS L+   N L S+P+EIG   +L    + DN  L  
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNR-LTR 349

Query: 534 IPFELALCSNLQIMSLDNCPLSQIP 558
           IP E++  + L ++ +    L  +P
Sbjct: 350 IPAEVSQATELHVLDVAGNRLLHLP 374



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 207/435 (47%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++ ++D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 7   LWRCNR-HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N++ E+P  +    +L++     N +  +     
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL+ LS+ D  ++ LP  +G L NL +L+L  N L  LP  +     L  LDL +NE
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + N+P+ +G L++L  L L  N+L  +P+ +    +L   +V    L  LP+ + S LTS
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI-SGLTS 244

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ +S+                        N ++ IP GI  + K LS + +  N LT
Sbjct: 245 LTDLVISQ------------------------NLLETIPDGI-GKLKKLSILKVDQNRLT 279

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            LP  +G    LTEL                       VL+ N L  LP SIG L+KL  
Sbjct: 280 QLPEAVGECESLTEL-----------------------VLTENQLLTLPKSIGKLKKLSN 316

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+ + NKL SLP EIG    L    ++ N+L  +P  +   T L  L V  N L  +P  
Sbjct: 317 LNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLS 376

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  L+L+DN
Sbjct: 377 LTALK-LKALWLSDN 390



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/314 (35%), Positives = 166/314 (52%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 84  LVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 204 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE + +C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 264 KLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPKS-IGKLKKLSNLNADRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 323 KLVSLPKEIGGCCSLT-VFCV--RDNRLTRIPAEV-SQATELHVLDVAGNRLLHLPLSL- 377

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 378 TALKLKALWLSDNQ 391



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 177/375 (47%), Gaps = 79/375 (21%)

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
           +Y  +L  L +  N++RELP +  +L  L  L L+ N ++ LP EI N   LV LD+  N
Sbjct: 33  RYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRN 92

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL--LSS 330
           E   IP+                    +PE++S C  L   +  G  L+ LP+    L +
Sbjct: 93  E---IPE--------------------IPESISFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 331 LT--SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           LT  S+N+I+L            P    ++Y                     NL+ + ++
Sbjct: 130 LTCLSVNDISLQ---------SLPENIGNLY---------------------NLASLELR 159

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
           +NLLT LP  L     L EL+LG N+I  L E I  L++L+ L L  N L +LP  IGNL
Sbjct: 160 ENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNL 219

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
           + L CLD+ EN+LE LP EI  L  L  L++  N L ++P  IG L  LS L V +N L 
Sbjct: 220 KNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLT 279

Query: 509 SIPEEIGTLENLHTLYLNDNTCLN----------------------NIPFELALCSNLQI 546
            +PE +G  E+L  L L +N  L                       ++P E+  C +L +
Sbjct: 280 QLPEAVGECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339

Query: 547 MSLDNCPLSQIPSEI 561
             + +  L++IP+E+
Sbjct: 340 FCVRDNRLTRIPAEV 354


>gi|301610186|ref|XP_002934640.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387 homolog [Xenopus (Silurana) tropicalis]
          Length = 813

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 228/461 (49%), Gaps = 35/461 (7%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K  ++LNLD   + I+ LP +V +L+ L +L L GN++ SLP +IG + NL  L L+ N 
Sbjct: 233 KNLHVLNLD--GNQISALPKAVFRLSQLVKLCLSGNQIKSLPKEIGDLKNLRELSLSSNQ 290

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT LP  L NL  L  L L  NKL  +   +  L  LK+L +  N +  +   + +   +
Sbjct: 291 LTFLPVQLYNLTSLEELTLDDNKLTAISDKLQNLKQLKVLSIANNLLTDITEKVCWCPAI 350

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L +  N++  LP ++  L+NL  L +  N LE LP ++ +   L  +   +N L+ IP
Sbjct: 351 ECLKLNGNQMYRLPTKIHNLRNLKELHIERNALEMLPDQLAHLNNLSVIVCANNNLLWIP 410

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             L N   +T+L LS N+L  VP+ LS    L   N+    +  + + ++ +   + ++ 
Sbjct: 411 IELKNCNQITKLDLSGNKLSEVPQALSSMTSLLYLNLNQNEIHEIANSIIHN-RKLEHLE 469

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINF---EHNQIDKIPYGI---------------FSRA- 379
           LS NK T +       F  ++++ +     N+I+ +P  I               F R  
Sbjct: 470 LSGNKLTVFS----VHFCGLHNLAYLDLSRNEINSVPSAISNLESLSELLLHSNKFRRFP 525

Query: 380 ------KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
                 K+L K+++  N + ++P  +    GL  +NL  N       ++ ++ +LE L +
Sbjct: 526 IELCALKSLQKIDLSGNQIETVPSGISLLEGLRYVNLSNNSFKVFPRELFSVSSLETLKI 585

Query: 434 SNNLLKKL---PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA 490
           S    +KL   P  +  L+ LK L++ +N +++LP  IG +K L +L   SNQL  LP +
Sbjct: 586 SQKDGRKLISLPDELSKLKNLKELEISDNNIKTLPGSIGEMKNLVQLTATSNQLYHLPAS 645

Query: 491 IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
           I  L  L  LS+  N L S+P +I  L+ L  + L+ N  L
Sbjct: 646 ISSLAALQQLSLKGNQLTSLPSDISGLQKLREINLDSNPML 686



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 258/522 (49%), Gaps = 17/522 (3%)

Query: 40  SDEYGYFEDMPEKDNKKCGVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCK 99
           S++ G F  MPE+D ++    +   V     E N        K  + +D N     +   
Sbjct: 47  SEQCG-FTGMPERDTERLPSSISVWV-----EDNL-------KNLVPSDSNNMPRTVPSG 93

Query: 100 EENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL 159
             +I +++L+   +T +PP V + T+L+ L L  N +  LP+ + +++ L  L L  N+L
Sbjct: 94  TGSITSINLNSKELTEIPPDVFRCTNLQCLLLSNNFMTHLPTSLCHLSKLEILSLEGNAL 153

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
            SLP  + +L QL  L++ HN++  LP  +  L ++K L+   N++  + P +  L+ L 
Sbjct: 154 VSLPPEICSLSQLTALNVNHNQIAVLPHEISGLKNIKQLFANNNKLSQLPPCLGDLTTLQ 213

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
           +L +  N ++ LP     LKNL  L+L  N +  LPK +   + LV L L  N++ ++P 
Sbjct: 214 VLCISGNSMKTLPDSTASLKNLHVLNLDGNQISALPKAVFRLSQLVKLCLSGNQIKSLPK 273

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +G+L NL  L LS N+L  +P  L     L E  ++   L+++ D  L +L  +  +++
Sbjct: 274 EIGDLKNLRELSLSSNQLTFLPVQLYNLTSLEELTLDDNKLTAISDK-LQNLKQLKVLSI 332

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           + N  T   +       ++  +    NQ+ ++P  I +  +NL +++++ N L  LP  L
Sbjct: 333 ANNLLTDI-TEKVCWCPAIECLKLNGNQMYRLPTKIHN-LRNLKELHIERNALEMLPDQL 390

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
                L+ +    N +  +  +++N   +  L LS N L ++P ++ ++  L  L+L +N
Sbjct: 391 AHLNNLSVIVCANNNLLWIPIELKNCNQITKLDLSGNKLSEVPQALSSMTSLLYLNLNQN 450

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           ++  + N I   ++L+ L L  N+L         L NL+YL +  N + S+P  I  LE+
Sbjct: 451 EIHEIANSIIHNRKLEHLELSGNKLTVFSVHFCGLHNLAYLDLSRNEINSVPSAISNLES 510

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L L+ N      P EL    +LQ + L    +  +PS I
Sbjct: 511 LSELLLHSNK-FRRFPIELCALKSLQKIDLSGNQIETVPSGI 551


>gi|158257928|dbj|BAF84937.1| unnamed protein product [Homo sapiens]
          Length = 524

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 194/385 (50%), Gaps = 28/385 (7%)

Query: 175 LDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I+ LPP
Sbjct: 17  IDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPP 76

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT L ++
Sbjct: 77  EIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVN 136

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              L+S+PE +    +L    +    L+ LPD L                         T
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSL-------------------------T 171

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L++  N
Sbjct: 172 QLRRLEELDLGNNEIYNLPESIGALL-HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           ++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L +++N+L  LP  +G  + 
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECES 290

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L  L+L  NQL++LP++IG L  LS L+   N L S+P+EIG   +L    + DN  L  
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNR-LTR 349

Query: 534 IPFELALCSNLQIMSLDNCPLSQIP 558
           IP E++  + L ++ +    L  +P
Sbjct: 350 IPAEVSQATELHVLDVAGNRLLHLP 374



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 207/435 (47%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++ ++D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 7   LWRCNR-HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N++ E+P  +    +L++     N +  +     
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL+ LS+ D  ++ LP  +G L NL +L+L  N L  LP  +     L  LDL +NE
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + N+P+ +G L++L  L L  N+L  +P+ +    +L   +V    L  LP+ + S LTS
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI-SGLTS 244

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ +S+                        N ++ IP GI  + K LS + +  N LT
Sbjct: 245 LTDLVISQ------------------------NLLETIPDGI-GKLKKLSILKVDQNRLT 279

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            LP  +G    LTEL                       VL+ N L  LP SIG L+KL  
Sbjct: 280 QLPEAVGECESLTEL-----------------------VLTENQLLTLPKSIGKLKKLSN 316

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+ + NKL SLP EIG    L    ++ N+L  +P  +   T L  L V  N L  +P  
Sbjct: 317 LNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLS 376

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  L+L+DN
Sbjct: 377 LTALK-LKALWLSDN 390



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/314 (35%), Positives = 166/314 (52%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 84  LVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 204 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE + +C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 264 KLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPKS-IGKLKKLSNLNADRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 323 KLVSLPKEIGGCCSLT-VFCV--RDNRLTRIPAEV-SQATELHVLDVAGNRLLHLPLSL- 377

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 378 TALKLKALWLSDNQ 391



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 168/349 (48%), Gaps = 56/349 (16%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L ELP++      L  L L  NE+  +P  + N + L  L +S N + 
Sbjct: 36  RSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIP 95

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQ 354
            +PE++S C  L   +  G  L+ LP+    L +LT  S+N+I+L            P  
Sbjct: 96  EIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQ---------SLPEN 146

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
             ++Y                     NL+ + +++NLLT LP  L     L EL+LG N+
Sbjct: 147 IGNLY---------------------NLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           I  L E I  L++L+ L L  N L +LP  IGNL+ L CLD+ EN+LE LP EI  L  L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN-- 532
             L++  N L ++P  IG L  LS L V +N L  +PE +G  E+L  L L +N  L   
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLP 305

Query: 533 --------------------NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                               ++P E+  C +L +  + +  L++IP+E+
Sbjct: 306 KSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEV 354


>gi|301609363|ref|XP_002934234.1| PREDICTED: protein LAP2 [Xenopus (Silurana) tropicalis]
          Length = 1359

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 200/417 (47%), Gaps = 29/417 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE + +LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTILPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    L+ LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G L +L  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIP-GFLGNLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N        G +   S+  +    N I ++P  I +  K L+ + + +N L  
Sbjct: 233 TYLDVSKNNIEMV-EDGISGCESLQDLLLSSNAIQQLPESIGA-LKKLTTLKVDENQLMY 290

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    + +L+   N+I  L   I +L+ +      +N L +LP  IG  +    L
Sbjct: 291 LPDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVL 350

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
            L  NKLESLP E+G +++L+ + L  N+L +LP +   L  L+ + + +N  QS P
Sbjct: 351 FLHSNKLESLPEEMGDMQKLKVINLSDNRLRNLPFSFTRLQQLTAMWLSDN--QSKP 405



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 191/385 (49%), Gaps = 28/385 (7%)

Query: 175 LDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           LD  H  L ++P  ++    +L+ LYL  N+I+ +   +    +L  LS+ DN +  LP 
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTILPA 86

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
            +  L NL  LD++ N ++E P+ I NC +L  ++   N +  +PD    L+NLT+L L+
Sbjct: 87  SIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLN 146

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              L+ +P    +   L    +    L  LP   ++ LT +  + L  N+FT  P     
Sbjct: 147 DAFLDFLPANFGRLTKLQILELRENQLKMLPK-TMNRLTQLERLDLGSNEFTEVPE---- 201

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
                                +  +   L +  M  N LT +P  LG    LT L++  N
Sbjct: 202 ---------------------VLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKN 240

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
            I  + + I    +L+ L+LS+N +++LP SIG L+KL  L ++EN+L  LP+ IG L  
Sbjct: 241 NIEMVEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDENQLMYLPDSIGGLTA 300

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           ++ L    N++ +LP +IGHL  +   +   N L  +P EIGT ++   L+L+ N  L +
Sbjct: 301 IEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVLFLHSNK-LES 359

Query: 534 IPFELALCSNLQIMSLDNCPLSQIP 558
           +P E+     L++++L +  L  +P
Sbjct: 360 LPEEMGDMQKLKVINLSDNRLRNLP 384



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 157/310 (50%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLDFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N++  +   +  L  L+ L +  N I  +   +   ++L  L L+ N +++LP+ IG  
Sbjct: 216 GNKLTYIPGFLGNLKQLTYLDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESIGAL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L TL +  N+L+ +PD +G L  +  L  S+N +E++P ++   + +  F  +   L+
Sbjct: 276 KKLTTLKVDENQLMYLPDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLT 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +  S   + L  NK  + P   G  Q   V  IN   N++  +P+  F+R +
Sbjct: 336 QLPPE-IGTWKSATVLFLHSNKLESLPEEMGDMQKLKV--INLSDNRLRNLPFS-FTRLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 1/202 (0%)

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS 416
           +V S+++ H  ++++P  IF+  K L ++ +  N +  LP  L     L +L+L  N ++
Sbjct: 23  TVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
            L   I NL+NL  L +S N +++ P +I N + L  ++   N +  LP+    L  L +
Sbjct: 83  ILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
           L L    L  LP   G LT L  L + EN L+ +P+ +  L  L  L L  N     +P 
Sbjct: 143 LYLNDAFLDFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE-FTEVPE 201

Query: 537 ELALCSNLQIMSLDNCPLSQIP 558
            L   S L+   +D   L+ IP
Sbjct: 202 VLEQLSGLKEFWMDGNKLTYIP 223


>gi|429962035|gb|ELA41579.1| hypothetical protein VICG_01443 [Vittaforma corneae ATCC 50505]
          Length = 462

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 138/394 (35%), Positives = 190/394 (48%), Gaps = 51/394 (12%)

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           ++TSL D +  L+ L  LDL   +L  LP  + +L SL  LYL  N  +T+ P I  L N
Sbjct: 67  NITSLHDVIEELKYLCCLDLSRKELRSLPPEIGELESLDGLYLNGNEFETLSPVIGELKN 126

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L + DNK+  L PE+G LKNL  LDL+ N L  LP EIG    L  L L  N+L  +
Sbjct: 127 LKYLDLYDNKLERLSPEIGRLKNLRELDLSGNKLRTLPSEIGELVNLGILHLNDNKLERL 186

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  +G L +L RL L+ N LE++PE                              +I N+
Sbjct: 187 PPEIGRLKDLWRLYLNGNNLEALPE------------------------------TIENL 216

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
                               ++ +    N++  +P  I     NL  +++ DN L  LP 
Sbjct: 217 K-----------------DRLWYLYLNGNKLKTLPPEI-GELVNLGILHLNDNKLERLPP 258

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++G    L EL L  N +  L E I+ L  L+ L L+ N LK LP  IG L+ L  L L 
Sbjct: 259 EIGRLKNLRELGLNGNNLEALPETIRELKKLQYLYLNGNKLKTLPPEIGELKWLLVLHLN 318

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
            NKLE LP EIG L+ L  L L  N+  +LP  IG L NL +L +  N L+ +P  I  L
Sbjct: 319 GNKLERLPPEIGELEGLYTLYLNDNEFETLPSEIGKLKNLRHLHLSGNKLERLPYVIAEL 378

Query: 518 ENLHTLYLNDNTCLNNIPFELA--LCSNLQIMSL 549
           +NL  L L+ N  L  +P  +   L  +LQ++ L
Sbjct: 379 KNLRELDLSGNK-LETLPSYIVRMLSGSLQLLDL 411



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LPP + +L  L+ LYL GN+  +L   IG + NL  L L +N L  L   
Sbjct: 84  LDLSRKELRSLPPEIGELESLDGLYLNGNEFETLSPVIGELKNLKYLDLYDNKLERLSPE 143

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ LR LDL  NKL  LP                        +I  L NL +L + D
Sbjct: 144 IGRLKNLRELDLSGNKLRTLP-----------------------SEIGELVNLGILHLND 180

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT-MLVTLDLQHNELVNIPDMLGNL 284
           NK+  LPPE+G LK+L  L L  N+LE LP+ I N    L  L L  N+L  +P  +G L
Sbjct: 181 NKLERLPPEIGRLKDLWRLYLNGNNLEALPETIENLKDRLWYLYLNGNKLKTLPPEIGEL 240

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
           +NL  L L+ N+LE +P  + +  +L E  + G  L +LP+  +  L  +  + L+ NK 
Sbjct: 241 VNLGILHLNDNKLERLPPEIGRLKNLRELGLNGNNLEALPE-TIRELKKLQYLYLNGNKL 299

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
              P                  +I ++ +        L  +++  N L  LP ++G   G
Sbjct: 300 KTLPP-----------------EIGELKW--------LLVLHLNGNKLERLPPEIGELEG 334

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L  L L  N+   L  +I  L NL  L LS N L++LP  I  L+ L+ LDL  NKLE+L
Sbjct: 335 LYTLYLNDNEFETLPSEIGKLKNLRHLHLSGNKLERLPYVIAELKNLRELDLSGNKLETL 394

Query: 465 PNEI 468
           P+ I
Sbjct: 395 PSYI 398



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/358 (33%), Positives = 180/358 (50%), Gaps = 26/358 (7%)

Query: 205 IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTML 264
           I ++H  I+ L  L  L +   ++R LPPE+GEL++L  L L  N  E L   IG    L
Sbjct: 68  ITSLHDVIEELKYLCCLDLSRKELRSLPPEIGELESLDGLYLNGNEFETLSPVIGELKNL 127

Query: 265 VTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
             LDL  N+L  +   +G L NL  L LS N+L ++P  + + V+L   ++    L  LP
Sbjct: 128 KYLDLYDNKLERLSPEIGRLKNLRELDLSGNKLRTLPSEIGELVNLGILHLNDNKLERLP 187

Query: 325 DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
                                  P  G  +   ++ +    N ++ +P  I +    L  
Sbjct: 188 -----------------------PEIG--RLKDLWRLYLNGNNLEALPETIENLKDRLWY 222

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
           + +  N L +LP ++G  V L  L+L  N++ +L  +I  L NL  L L+ N L+ LP +
Sbjct: 223 LYLNGNKLKTLPPEIGELVNLGILHLNDNKLERLPPEIGRLKNLRELGLNGNNLEALPET 282

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
           I  L+KL+ L L  NKL++LP EIG LK L  L L  N+L  LP  IG L  L  L + +
Sbjct: 283 IRELKKLQYLYLNGNKLKTLPPEIGELKWLLVLHLNGNKLERLPPEIGELEGLYTLYLND 342

Query: 505 NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           N  +++P EIG L+NL  L+L+ N  L  +P+ +A   NL+ + L    L  +PS IV
Sbjct: 343 NEFETLPSEIGKLKNLRHLHLSGNK-LERLPYVIAELKNLRELDLSGNKLETLPSYIV 399



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/229 (38%), Positives = 129/229 (56%), Gaps = 3/229 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLT-HLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL 159
           +++  L L+ +++  LP ++E L   L  LYL GNKL +LP +IG + NL  L L +N L
Sbjct: 194 KDLWRLYLNGNNLEALPETIENLKDRLWYLYLNGNKLKTLPPEIGELVNLGILHLNDNKL 253

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
             LP  +  L+ LR L L  N L  LP  + +L  L+ LYL  N++KT+ P+I  L  L 
Sbjct: 254 ERLPPEIGRLKNLRELGLNGNNLEALPETIRELKKLQYLYLNGNKLKTLPPEIGELKWLL 313

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
           +L +  NK+  LPPE+GEL+ L TL L  N  E LP EIG    L  L L  N+L  +P 
Sbjct: 314 VLHLNGNKLERLPPEIGELEGLYTLYLNDNEFETLPSEIGKLKNLRHLHLSGNKLERLPY 373

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCV--HLNEFNVEGCALSSLPDG 326
           ++  L NL  L LS N+LE++P  + + +   L   ++ G  +  + DG
Sbjct: 374 VIAELKNLRELDLSGNKLETLPSYIVRMLSGSLQLLDLRGNNIYEVGDG 422



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/280 (35%), Positives = 136/280 (48%), Gaps = 47/280 (16%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +  L P + +L +L EL L GNKL +LPS+IG + NL  L L +N L 
Sbjct: 125 KNLKYLDLYDNKLERLSPEIGRLKNLRELDLSGNKLRTLPSEIGELVNLGILHLNDNKLE 184

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS-LKILYLRFNRIKTVHPDIQYLSNLS 219
            LP  +  L+ L  L L  N L  LP  +  L   L  LYL  N++KT+ P+I  L NL 
Sbjct: 185 RLPPEIGRLKDLWRLYLNGNNLEALPETIENLKDRLWYLYLNGNKLKTLPPEIGELVNLG 244

Query: 220 MLSMRDNK------------------------------IREL----------------PP 233
           +L + DNK                              IREL                PP
Sbjct: 245 ILHLNDNKLERLPPEIGRLKNLRELGLNGNNLEALPETIRELKKLQYLYLNGNKLKTLPP 304

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+GELK L+ L L  N LE LP EIG    L TL L  NE   +P  +G L NL  L LS
Sbjct: 305 EIGELKWLLVLHLNGNKLERLPPEIGELEGLYTLYLNDNEFETLPSEIGKLKNLRHLHLS 364

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
            N+LE +P  +++  +L E ++ G  L +LP  ++  L+ 
Sbjct: 365 GNKLERLPYVIAELKNLRELDLSGNKLETLPSYIVRMLSG 404



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/182 (37%), Positives = 106/182 (58%)

Query: 100 EENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL 159
           ++ +  L L+ + +  LPP + +L +L  L+L  NKL  LP +IG + NL  LGL  N+L
Sbjct: 217 KDRLWYLYLNGNKLKTLPPEIGELVNLGILHLNDNKLERLPPEIGRLKNLRELGLNGNNL 276

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
            +LP+++  L++L+ L L  NKL  LP  + +L  L +L+L  N+++ + P+I  L  L 
Sbjct: 277 EALPETIRELKKLQYLYLNGNKLKTLPPEIGELKWLLVLHLNGNKLERLPPEIGELEGLY 336

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L + DN+   LP E+G+LKNL  L L+ N LE LP  I     L  LDL  N+L  +P 
Sbjct: 337 TLYLNDNEFETLPSEIGKLKNLRHLHLSGNKLERLPYVIAELKNLRELDLSGNKLETLPS 396

Query: 280 ML 281
            +
Sbjct: 397 YI 398


>gi|402582061|gb|EJW76007.1| leucine-rich repeat containing protein, partial [Wuchereria
           bancrofti]
          Length = 173

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 82/167 (49%), Positives = 119/167 (71%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           +++++  +CK+     LDLS S I  +P S+  L  L EL+LY NKL+ LP++IG + NL
Sbjct: 7   DLQRDLQKCKDNEETRLDLSSSDIVSIPSSIRDLVQLTELFLYKNKLSILPNEIGNLVNL 66

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
             LGL+EN LTSLPD+LA L  L  LDLRHNKL ELP V+Y+++SL+ L+LR+NRI ++ 
Sbjct: 67  KKLGLSENGLTSLPDTLAALTHLETLDLRHNKLCELPSVIYQISSLETLWLRYNRIVSIG 126

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPK 256
            +I  L  L M+ +R+NKIRELP  +G++K+LV   L++NHL  +P+
Sbjct: 127 SEIGRLKRLKMIDLRENKIRELPSTVGQIKSLVVCLLSYNHLRIIPE 173



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 85/146 (58%)

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
           +++++  + + S+P  +   V LTEL L  N++S L  +I NLVNL+ L LS N L  LP
Sbjct: 21  TRLDLSSSDIVSIPSSIRDLVQLTELFLYKNKLSILPNEIGNLVNLKKLGLSENGLTSLP 80

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
            ++  L  L+ LDL  NKL  LP+ I  +  L+ L L+ N++VS+   IG L  L  + +
Sbjct: 81  DTLAALTHLETLDLRHNKLCELPSVIYQISSLETLWLRYNRIVSIGSEIGRLKRLKMIDL 140

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDN 528
            EN ++ +P  +G +++L    L+ N
Sbjct: 141 RENKIRELPSTVGQIKSLVVCLLSYN 166



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 85/152 (55%), Gaps = 1/152 (0%)

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
           ++   + I  IP  I    + L+++ +  N L+ LP ++G  V L +L L  N ++ L +
Sbjct: 23  LDLSSSDIVSIPSSIRDLVQ-LTELFLYKNKLSILPNEIGNLVNLKKLGLSENGLTSLPD 81

Query: 421 DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQ 480
            +  L +LE L L +N L +LPS I  +  L+ L L  N++ S+ +EIG LK L+ + L+
Sbjct: 82  TLAALTHLETLDLRHNKLCELPSVIYQISSLETLWLRYNRIVSIGSEIGRLKRLKMIDLR 141

Query: 481 SNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
            N++  LP  +G + +L    +  N+L+ IPE
Sbjct: 142 ENKIRELPSTVGQIKSLVVCLLSYNHLRIIPE 173



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 70/132 (53%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           LDL  + +  +P  +  L  L  L+L  N++  +  +I  L NL  L + +N +  LP  
Sbjct: 23  LDLSSSDIVSIPSSIRDLVQLTELFLYKNKLSILPNEIGNLVNLKKLGLSENGLTSLPDT 82

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
           L  L +L TLDL HN L ELP  I   + L TL L++N +V+I   +G L  L  + L  
Sbjct: 83  LAALTHLETLDLRHNKLCELPSVIYQISSLETLWLRYNRIVSIGSEIGRLKRLKMIDLRE 142

Query: 295 NRLESVPETLSK 306
           N++  +P T+ +
Sbjct: 143 NKIRELPSTVGQ 154



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 1/144 (0%)

Query: 205 IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTML 264
           I ++   I+ L  L+ L +  NK+  LP E+G L NL  L L+ N L  LP  +   T L
Sbjct: 30  IVSIPSSIRDLVQLTELFLYKNKLSILPNEIGNLVNLKKLGLSENGLTSLPDTLAALTHL 89

Query: 265 VTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
            TLDL+HN+L  +P ++  + +L  L L YNR+ S+   + +   L   ++    +  LP
Sbjct: 90  ETLDLRHNKLCELPSVIYQISSLETLWLRYNRIVSIGSEIGRLKRLKMIDLRENKIRELP 149

Query: 325 DGLLSSLTSINNITLSRNKFTAYP 348
              +  + S+    LS N     P
Sbjct: 150 ST-VGQIKSLVVCLLSYNHLRIIP 172



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 82/155 (52%), Gaps = 3/155 (1%)

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
           TRL LS + + S+P ++   V L E  +    LS LP+  + +L ++  + LS N  T+ 
Sbjct: 21  TRLDLSSSDIVSIPSSIRDLVQLTELFLYKNKLSILPNE-IGNLVNLKKLGLSENGLTSL 79

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
           P       T + +++  HN++ ++P  I+ +  +L  + ++ N + S+  ++G    L  
Sbjct: 80  PDTLAA-LTHLETLDLRHNKLCELPSVIY-QISSLETLWLRYNRIVSIGSEIGRLKRLKM 137

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
           ++L  N+I +L   +  + +L V +LS N L+ +P
Sbjct: 138 IDLRENKIRELPSTVGQIKSLVVCLLSYNHLRIIP 172



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 3/99 (3%)

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
           RL L S+ +VS+P +I  L  L+ L + +N L  +P EIG L NL  L L++N  L ++P
Sbjct: 22  RLDLSSSDIVSIPSSIRDLVQLTELFLYKNKLSILPNEIGNLVNLKKLGLSENG-LTSLP 80

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEI--VVGGPSLIIRY 572
             LA  ++L+ + L +  L ++PS I  +    +L +RY
Sbjct: 81  DTLAALTHLETLDLRHNKLCELPSVIYQISSLETLWLRY 119


>gi|440296439|gb|ELP89266.1| oligodendrocyte-myelin glycoprotein precursor, putative [Entamoeba
           invadens IP1]
          Length = 508

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 234/476 (49%), Gaps = 34/476 (7%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL--TSL 162
           NL+ S +  T +PP V ++ +LE L L  N++ S+P  I   TNL  L LA+N+L    +
Sbjct: 42  NLNCSVNDFTEIPPEVFQMVNLEILTLSENRITSVPDSISVATNLRELYLAKNNLFYDGI 101

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
              +     L+ LD+ +NKL  +PM +  L SL+ L +  N ++T+ P+I  L  L  L 
Sbjct: 102 SAEIKKCSNLQRLDISNNKLEAIPMEIGSLLSLEYLNISENALQTIPPEIGMLDKLQTLL 161

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           M  N I++LP E+G L+ L  LD++ N ++ LP+E+ N   L  L + +N+L    D+L 
Sbjct: 162 MNKNSIQKLPAEIGNLRGLYELDMSSNQMDMLPEELSNMLSLKILRIGYNKLSGNIDVLT 221

Query: 283 NLINLTRLRLSYN-RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           +   L  L    N  +  +P  L    +L    V    ++ +P   L+SL  +  + +  
Sbjct: 222 HFKFLVELDCQNNPGILDLP-PLDSLQNLTRLVVRNLPITHIPG--LTSLKMLCELNVRD 278

Query: 342 N-KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT--SLPLD 398
           N K    P     + T++  ++F    I  IP  I  +   L+ + +  N LT  S P  
Sbjct: 279 NLKMQGIPEE-IFEITTLQRLDFVGCNITVIPEDI-QKLTALNMLELSRNALTEASFPPA 336

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           + T   +++L+L  N++    + + +L ++  L +SNNLL   P + G L  ++ L    
Sbjct: 337 VSTLTSISKLSLSGNKLHTYPQTLCDLTSVVDLDISNNLLVDFPDAFGQLSNIQILCAAG 396

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           NK+  +P  +  L  +  + L++NQL  LP  IG +  L+ L +  N L  +P E+G LE
Sbjct: 397 NKINRIPEVMDKLISVTYMDLKNNQLKRLPATIGEMRQLNRLELAHNMLPVLPPEMGQLE 456

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
            +                       +Q++ L N PL   P +IVV GP+ I RYLK
Sbjct: 457 GI-----------------------IQVLDLSNNPLVIPPKDIVVKGPAAICRYLK 489



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 202/406 (49%), Gaps = 35/406 (8%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           I  E  +C   N+  LD+S + +  +P  +  L  LE L +  N L ++P +IG +  L 
Sbjct: 101 ISAEIKKCS--NLQRLDISNNKLEAIPMEIGSLLSLEYLNISENALQTIPPEIGMLDKLQ 158

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L + +NS+  LP  + NL+ L  LD+  N+++ LP  +  + SLKIL + +N++     
Sbjct: 159 TLLMNKNSIQKLPAEIGNLRGLYELDMSSNQMDMLPEELSNMLSLKILRIGYNKLSGNID 218

Query: 211 DIQYLSNLSMLSMRDN-KIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
            + +   L  L  ++N  I +LPP L  L+NL  L + +  +  +P  + +  ML  L++
Sbjct: 219 VLTHFKFLVELDCQNNPGILDLPP-LDSLQNLTRLVVRNLPITHIPG-LTSLKMLCELNV 276

Query: 270 QHN-ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL--SSLPDG 326
           + N ++  IP+ +  +  L RL      +  +PE + K   LN   +   AL  +S P  
Sbjct: 277 RDNLKMQGIPEEIFEITTLQRLDFVGCNITVIPEDIQKLTALNMLELSRNALTEASFPPA 336

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
            +S+LTSI+ ++LS NK   YP       TSV  +                        +
Sbjct: 337 -VSTLTSISKLSLSGNKLHTYPQ-TLCDLTSVVDL------------------------D 370

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           + +NLL   P   G    +  L    N+I+++ E +  L+++  + L NN LK+LP++IG
Sbjct: 371 ISNNLLVDFPDAFGQLSNIQILCAAGNKINRIPEVMDKLISVTYMDLKNNQLKRLPATIG 430

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKE-LQRLILQSNQLVSLPRAI 491
            +R+L  L+L  N L  LP E+G L+  +Q L L +N LV  P+ I
Sbjct: 431 EMRQLNRLELAHNMLPVLPPEMGQLEGIIQVLDLSNNPLVIPPKDI 476



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 5/206 (2%)

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           + +++ I ++    + +P G   +     ++N   N   +IP  +F    NL  + + +N
Sbjct: 15  MLAMDTIEITGKNMSTFPKG--IEKCQCSNLNCSVNDFTEIPPEVFQMV-NLEILTLSEN 71

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQI--SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
            +TS+P  +     L EL L  N +    +S +I+   NL+ L +SNN L+ +P  IG+L
Sbjct: 72  RITSVPDSISVATNLRELYLAKNNLFYDGISAEIKKCSNLQRLDISNNKLEAIPMEIGSL 131

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
             L+ L++ EN L+++P EIG L +LQ L++  N +  LP  IG+L  L  L +  N + 
Sbjct: 132 LSLEYLNISENALQTIPPEIGMLDKLQTLLMNKNSIQKLPAEIGNLRGLYELDMSSNQMD 191

Query: 509 SIPEEIGTLENLHTLYLNDNTCLNNI 534
            +PEE+  + +L  L +  N    NI
Sbjct: 192 MLPEELSNMLSLKILRIGYNKLSGNI 217



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 143/303 (47%), Gaps = 30/303 (9%)

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           ++ +  + ++   + + P+ + KC   +  N      + +P  +   + ++  +TLS N+
Sbjct: 15  MLAMDTIEITGKNMSTFPKGIEKC-QCSNLNCSVNDFTEIPPEVFQ-MVNLEILTLSENR 72

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQI--DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
            T+ P       T++  +    N +  D I   I  +  NL ++++ +N L ++P+++G+
Sbjct: 73  ITSVPDSISVA-TNLRELYLAKNNLFYDGISAEI-KKCSNLQRLDISNNKLEAIPMEIGS 130

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
            + L  LN+  N +  +  +I  L  L+ L+++ N ++KLP+ IGNLR L  LD+  N++
Sbjct: 131 LLSLEYLNISENALQTIPPEIGMLDKLQTLLMNKNSIQKLPAEIGNLRGLYELDMSSNQM 190

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGH-----------------------LTNLS 498
           + LP E+  +  L+ L +  N+L      + H                       L NL+
Sbjct: 191 DMLPEELSNMLSLKILRIGYNKLSGNIDVLTHFKFLVELDCQNNPGILDLPPLDSLQNLT 250

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L V    +  IP  + +L+ L  L + DN  +  IP E+   + LQ +    C ++ IP
Sbjct: 251 RLVVRNLPITHIP-GLTSLKMLCELNVRDNLKMQGIPEEIFEITTLQRLDFVGCNITVIP 309

Query: 559 SEI 561
            +I
Sbjct: 310 EDI 312


>gi|156400914|ref|XP_001639037.1| predicted protein [Nematostella vectensis]
 gi|156226162|gb|EDO46974.1| predicted protein [Nematostella vectensis]
          Length = 414

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/413 (31%), Positives = 206/413 (49%), Gaps = 51/413 (12%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           LEE+YL  N+L  LP  +  + NL  LGL++N LT LP  L+NL  LR+LD   N + ++
Sbjct: 27  LEEVYLDANQLRDLPRGLFNLQNLQVLGLSDNELTILPSVLSNLVNLRILDFSKNGIIDI 86

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  +    +L+ +    N I  +     +L+NL+ L + D  +  LP   G L +L  L+
Sbjct: 87  PETIKHCKNLQEIDASVNPIGKIPETFCHLANLTHLYLNDAFLDFLPGNFGRLISLRILE 146

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESV-PETL 304
           L  NHL  LPK +     L  LD+ +NE   +P ++G L+NLT L +  N ++ + PE  
Sbjct: 147 LRENHLRVLPKSMSQLKNLERLDIGNNEFTELPMVVGCLLNLTELWMDSNAIKELRPEI- 205

Query: 305 SKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFE 364
                                GLL  L  ++   +S+N+    P                
Sbjct: 206 ---------------------GLLRRLMFLD---VSKNRLEWLPP--------------- 226

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN 424
             +I+ +        ++L+ + + +NLL  +P  +G    L  L L  N + +L   I  
Sbjct: 227 --EIESL--------QSLTDLYLSNNLLIEIPEQIGALGKLQTLKLEENHLGELPNSIGK 276

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           LV LE L+L+ N L  LP S+G LRKL+ L+++EN LES+P+E+G    +  L L+ N+L
Sbjct: 277 LVELEELILTCNELVSLPPSLGYLRKLRVLNIDENFLESIPSELGSCTAMTILSLRDNRL 336

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           V LP +IG +  L  +++  N L+ +P     L +L  L+L++N     IP +
Sbjct: 337 VHLPDSIGRMPKLQVINLASNRLEYLPYSFHKLVSLKALWLSENQSKPMIPLQ 389



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 193/367 (52%), Gaps = 7/367 (1%)

Query: 195 LKILYLRFNRIKTVHPDI---QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHL 251
           + +L LR + + TV  D+   +    L  + +  N++R+LP  L  L+NL  L L+ N L
Sbjct: 1   MSVLELRHSNLTTVSHDLFKSKEGKALEEVYLDANQLRDLPRGLFNLQNLQVLGLSDNEL 60

Query: 252 EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN 311
             LP  + N   L  LD   N +++IP+ + +  NL  +  S N +  +PET     +L 
Sbjct: 61  TILPSVLSNLVNLRILDFSKNGIIDIPETIKHCKNLQEIDASVNPIGKIPETFCHLANLT 120

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
              +    L  LP G    L S+  + L  N     P    +Q  ++  ++  +N+  ++
Sbjct: 121 HLYLNDAFLDFLP-GNFGRLISLRILELRENHLRVLPKSM-SQLKNLERLDIGNNEFTEL 178

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  +     NL+++ M  N +  L  ++G    L  L++  N++  L  +I++L +L  L
Sbjct: 179 PM-VVGCLLNLTELWMDSNAIKELRPEIGLLRRLMFLDVSKNRLEWLPPEIESLQSLTDL 237

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            LSNNLL ++P  IG L KL+ L LEEN L  LPN IG L EL+ LIL  N+LVSLP ++
Sbjct: 238 YLSNNLLIEIPEQIGALGKLQTLKLEENHLGELPNSIGKLVELEELILTCNELVSLPPSL 297

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
           G+L  L  L++ EN L+SIP E+G+   +  L L DN  L ++P  +     LQ+++L +
Sbjct: 298 GYLRKLRVLNIDENFLESIPSELGSCTAMTILSLRDNR-LVHLPDSIGRMPKLQVINLAS 356

Query: 552 CPLSQIP 558
             L  +P
Sbjct: 357 NRLEYLP 363



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 159/302 (52%), Gaps = 5/302 (1%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           ++I +    CK  N+  +D S + I  +P +   L +L  LYL    L  LP   G + +
Sbjct: 84  IDIPETIKHCK--NLQEIDASVNPIGKIPETFCHLANLTHLYLNDAFLDFLPGNFGRLIS 141

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L L EN L  LP S++ L+ L  LD+ +N+  ELPMVV  L +L  L++  N IK +
Sbjct: 142 LRILELRENHLRVLPKSMSQLKNLERLDIGNNEFTELPMVVGCLLNLTELWMDSNAIKEL 201

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
            P+I  L  L  L +  N++  LPPE+  L++L  L L++N L E+P++IG    L TL 
Sbjct: 202 RPEIGLLRRLMFLDVSKNRLEWLPPEIESLQSLTDLYLSNNLLIEIPEQIGALGKLQTLK 261

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
           L+ N L  +P+ +G L+ L  L L+ N L S+P +L     L   N++   L S+P   L
Sbjct: 262 LEENHLGELPNSIGKLVELEELILTCNELVSLPPSLGYLRKLRVLNIDENFLESIPSE-L 320

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
            S T++  ++L  N+    P     +   +  IN   N+++ +PY  F +  +L  + + 
Sbjct: 321 GSCTAMTILSLRDNRLVHLPD-SIGRMPKLQVINLASNRLEYLPYS-FHKLVSLKALWLS 378

Query: 389 DN 390
           +N
Sbjct: 379 EN 380



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 165/335 (49%), Gaps = 26/335 (7%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD SK+ I  +P +++   +L+E+    N +  +P    ++ NLT L L +  L  
Sbjct: 72  NLRILDFSKNGIIDIPETIKHCKNLQEIDASVNPIGKIPETFCHLANLTHLYLNDAFLDF 131

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L  LR+L+LR N L  LP  + +L +L+ L +  N    +   +  L NL+ L
Sbjct: 132 LPGNFGRLISLRILELRENHLRVLPKSMSQLKNLERLDIGNNEFTELPMVVGCLLNLTEL 191

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M  N I+EL PE+G L+ L+ LD++ N LE LP EI +   L  L L +N L+ IP+ +
Sbjct: 192 WMDSNAIKELRPEIGLLRRLMFLDVSKNRLEWLPPEIESLQSLTDLYLSNNLLIEIPEQI 251

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  L  L+L  N L  +P ++ K V L E  +    L SLP                 
Sbjct: 252 GALGKLQTLKLEENHLGELPNSIGKLVELEELILTCNELVSLP----------------- 294

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                 PS G      +  +N + N ++ IP  + S    ++ ++++DN L  LP  +G 
Sbjct: 295 ------PSLG--YLRKLRVLNIDENFLESIPSELGS-CTAMTILSLRDNRLVHLPDSIGR 345

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
              L  +NL +N++  L      LV+L+ L LS N
Sbjct: 346 MPKLQVINLASNRLEYLPYSFHKLVSLKALWLSEN 380



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 172/347 (49%), Gaps = 30/347 (8%)

Query: 218 LSMLSMRDNKIRELPPEL---GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           +S+L +R + +  +  +L    E K L  + L  N L +LP+ + N   L  L L  NEL
Sbjct: 1   MSVLELRHSNLTTVSHDLFKSKEGKALEEVYLDANQLRDLPRGLFNLQNLQVLGLSDNEL 60

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P +L NL+NL  L  S N +  +PET+  C +L E +     +  +P+     L ++
Sbjct: 61  TILPSVLSNLVNLRILDFSKNGIIDIPETIKHCKNLQEIDASVNPIGKIPETF-CHLANL 119

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ L+ + F  +  G   +  S+  +    N +  +P  + S+ KNL ++++ +N  T 
Sbjct: 120 THLYLN-DAFLDFLPGNFGRLISLRILELRENHLRVLPKSM-SQLKNLERLDIGNNEFTE 177

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP+ +G  + LTEL + +N I                       K+L   IG LR+L  L
Sbjct: 178 LPMVVGCLLNLTELWMDSNAI-----------------------KELRPEIGLLRRLMFL 214

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           D+ +N+LE LP EI  L+ L  L L +N L+ +P  IG L  L  L + EN+L  +P  I
Sbjct: 215 DVSKNRLEWLPPEIESLQSLTDLYLSNNLLIEIPEQIGALGKLQTLKLEENHLGELPNSI 274

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           G L  L  L L  N  L ++P  L     L+++++D   L  IPSE+
Sbjct: 275 GKLVELEELILTCNE-LVSLPPSLGYLRKLRVLNIDENFLESIPSEL 320


>gi|432855257|ref|XP_004068131.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Oryzias
           latipes]
          Length = 1635

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 199/416 (47%), Gaps = 27/416 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  +      LEELYL  N++  LP Q+     L  L +
Sbjct: 52  FRGEEEVISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSM 111

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L++LP ++A+L  L+ LD+  N + E P  +     L ++    N I  +      
Sbjct: 112 PDNDLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQ 171

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ +PK I   T L  LDL  NE 
Sbjct: 172 LLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEF 231

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L L  N L+++P ++ K   L   ++    + +L D  +S   ++
Sbjct: 232 SEVPEVLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETL-DSDVSGCEAL 290

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                    D I  G+    K L+ + + DN LTS
Sbjct: 291 EDLLLSSNMLQHLP--------------------DSI--GML---KKLTTLKVDDNQLTS 325

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   L E +   N++  L   I  L +L       N L +LP  IGN R +  +
Sbjct: 326 LPHTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLTELPREIGNCRNVTVM 385

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
            L  NKLE LP+EIG + +L+ L L  N+L +LP     L +L+ L + +N  +++
Sbjct: 386 SLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDNQSKAL 441



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 192/412 (46%), Gaps = 52/412 (12%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  ++    +L+ LYL  N+I+ +   +     L  LSM DN +  
Sbjct: 59  ISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSN 118

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P  I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 119 LPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQL 178

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    +   L    +    L ++P  +   LT +  + L  N+F+  P  
Sbjct: 179 FLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSI-HRLTQLERLDLGSNEFSEVPE- 236

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  +  NL ++ + +N L ++P  +G    L  L+L
Sbjct: 237 ------------------------VLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDL 272

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL--------- 461
             N+I  L  D+     LE L+LS+N+L+ LP SIG L+KL  L +++N+L         
Sbjct: 273 AKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPHTIGS 332

Query: 462 --------------ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
                         ESLP  IG+L  L+      N L  LPR IG+  N++ +S+  N L
Sbjct: 333 LSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLTELPREIGNCRNVTVMSLRSNKL 392

Query: 508 QSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL-DNCPLSQIP 558
           + +P+EIG +  L  L L+DN  L N+PF      +L  + L DN   + IP
Sbjct: 393 EFLPDEIGQMTKLRVLNLSDNR-LKNLPFTFTKLKDLAALWLSDNQSKALIP 443



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 179/368 (48%), Gaps = 51/368 (13%)

Query: 218 LSMLSMRDNKIRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           +S+L      ++++P E+    + L  L L  N +EELPK++ NC  L  L +  N+L N
Sbjct: 59  ISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSN 118

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  + +L+NL  L +S N ++  P+ +  C  L+        ++ LPDG          
Sbjct: 119 LPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGF--------- 169

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
                           TQ  ++  +      ++ +P   F R   L  + +++N L ++P
Sbjct: 170 ----------------TQLLNLTQLFLNDAFLEYLPAN-FGRLSKLRILELRENHLKTMP 212

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +     L  L+LG+N+ S++ E ++ + NL+ L L NN L+ +P SIG LR+L+ LDL
Sbjct: 213 KSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDL 272

Query: 457 EENKLES-----------------------LPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
            +N++E+                       LP+ IG LK+L  L +  NQL SLP  IG 
Sbjct: 273 AKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPHTIGS 332

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L+ L       N L+S+P  IG L +L T   ++N  L  +P E+  C N+ +MSL +  
Sbjct: 333 LSLLEEFDCSCNELESLPPTIGYLHSLRTFAADEN-FLTELPREIGNCRNVTVMSLRSNK 391

Query: 554 LSQIPSEI 561
           L  +P EI
Sbjct: 392 LEFLPDEI 399



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 72/131 (54%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           +  L +  + +T LP ++  L+ LEE     N+L SLP  IGY+ +L      EN LT L
Sbjct: 313 LTTLKVDDNQLTSLPHTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLTEL 372

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P  + N + + V+ LR NKL  LP  + ++T L++L L  NR+K +      L +L+ L 
Sbjct: 373 PREIGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALW 432

Query: 223 MRDNKIRELPP 233
           + DN+ + L P
Sbjct: 433 LSDNQSKALIP 443


>gi|335292043|ref|XP_001927723.2| PREDICTED: leucine-rich repeat-containing protein 1 [Sus scrofa]
          Length = 524

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/390 (30%), Positives = 196/390 (50%), Gaps = 28/390 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + +  +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I
Sbjct: 12  RHVETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LPPE+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLT 131

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L ++   L+S+PE +    +L    +    L+ LPD L                     
Sbjct: 132 CLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL--------------------- 170

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
               TQ   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L
Sbjct: 171 ----TQLRRLEELDLGNNEIYNLPESIGALL-HLKDLWLDGNQLSELPQEIGNLKNLLCL 225

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L E+I  L +L  LV+S NLL+ LP  IG L+KL  L +++N+L  LP  I
Sbjct: 226 DVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAI 285

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + L  L+L  N+L++LP++IG L  LS L+   N L S+P+EIG   +L    + DN
Sbjct: 286 GDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDN 345

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L  IP E++  + L ++ +    L  +P
Sbjct: 346 R-LTRIPAEVSQATELHVLDVAGNRLLHLP 374



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 193/405 (47%), Gaps = 28/405 (6%)

Query: 125 HLEELYLYGNKLASLPSQI-GYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLN 183
           H+E +      L  +P +I  Y  +L  L L  N L  LP+    L +LR L L  N++ 
Sbjct: 13  HVETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 184 ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVT 243
            LP  +     L  L +  N I  +   I +   L +     N +  LP    EL+NL  
Sbjct: 73  RLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTC 132

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L +    L+ LP+ IGN   L +L+L+ N L  +PD L  L  L  L L  N + ++PE+
Sbjct: 133 LSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES 192

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           +   +HL +  ++G  LS LP         I N+                   ++  ++ 
Sbjct: 193 IGALLHLKDLWLDGNQLSELPQ-------EIGNLK------------------NLLCLDV 227

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
             N+++++P  I S   +L+ + +  NLL  LP  +G    L+ L +  N++++L E I 
Sbjct: 228 SENRLERLPEEI-SGLTSLTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAIG 286

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           +  +L  LVL+ N L  LP SIG L+KL  L+ + NKL SLP EIG    L    ++ N+
Sbjct: 287 DCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNR 346

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L  +P  +   T L  L V  N L  +P  + TL+ L  L+L+DN
Sbjct: 347 LTRIPAEVSQATELHVLDVAGNRLLHLPLSLTTLK-LKALWLSDN 390



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 127/373 (34%), Positives = 187/373 (50%), Gaps = 19/373 (5%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 84  LVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  +PD +G
Sbjct: 204 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE +  C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 264 KLKKLSILKVDQNRLTQLPEAIGDCESLTELVLTENRLLTLPKS-IGKLKKLSNLNADRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 323 KLVSLPKEIGGCCSLT-VFCV--RDNRLTRIPAEV-SQATELHVLDVAGNRLLHLPLSLT 378

Query: 401 TWVGLTELNLGTNQISKL---SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL-KCLDL 456
           T + L  L L  NQ   L     D  +    ++L     LL +LPS       L +C   
Sbjct: 379 T-LKLKALWLSDNQSQPLLTFQTDTDHTTGEKILTCV--LLPQLPSEPACQENLPRC--- 432

Query: 457 EENKLESLPNEIG 469
               LESL NE+ 
Sbjct: 433 --GALESLVNEVS 443



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 167/349 (47%), Gaps = 56/349 (16%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L ELP++      L  L L  NE+  +P  + N + L  L +S N + 
Sbjct: 36  RSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIP 95

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQ 354
            +PE++S C  L   +  G  L+ LP+    L +LT  S+N+I+L            P  
Sbjct: 96  EIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQ---------SLPEN 146

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
             ++Y                     NL+ + +++NLLT LP  L     L EL+LG N+
Sbjct: 147 IGNLY---------------------NLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           I  L E I  L++L+ L L  N L +LP  IGNL+ L CLD+ EN+LE LP EI  L  L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN-- 532
             L++  N L  LP  IG L  LS L V +N L  +PE IG  E+L  L L +N  L   
Sbjct: 246 TDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAIGDCESLTELVLTENRLLTLP 305

Query: 533 --------------------NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                               ++P E+  C +L +  + +  L++IP+E+
Sbjct: 306 KSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEV 354



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 192/395 (48%), Gaps = 31/395 (7%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++  +D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 7   LWRCNR-HVETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFN---RIKTVHP 210
           L++N +  LP  +AN  QL  LD+  N + E+P  +    +L+I     N   R+    P
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 125

Query: 211 DIQYLS--------------------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
           ++Q L+                    NL+ L +R+N +  LP  L +L+ L  LDL +N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           +  LP+ IG    L  L L  N+L  +P  +GNL NL  L +S NRLE +PE +S    L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQID 369
            +  +    L  LPDG +  L  ++ + + +N+ T  P   G  +  S+  +    N++ 
Sbjct: 246 TDLVISQNLLEMLPDG-IGKLKKLSILKVDQNRLTQLPEAIGDCE--SLTELVLTENRLL 302

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
            +P  I  + K LS +N   N L SLP ++G    LT   +  N+++++  ++     L 
Sbjct: 303 TLPKSI-GKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELH 361

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           VL ++ N L  LP S+  L KLK L L +N+ + L
Sbjct: 362 VLDVAGNRLLHLPLSLTTL-KLKALWLSDNQSQPL 395


>gi|455791544|gb|EMF43351.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 356

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/312 (36%), Positives = 174/312 (55%), Gaps = 26/312 (8%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L++   K+  LP E+ +L+NL +LDLA+N  + LPKEIG    L  L+L +N+L N
Sbjct: 49  DVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKN 108

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L +L  L LS NRL + P+ + +  +L + N++   L++L   +   L S+  
Sbjct: 109 LPKEIGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEI-GQLQSLQK 167

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L +N+  A P                 N+I ++        +NL ++ + +N LT LP
Sbjct: 168 LNLDKNRLKALP-----------------NEIGQL--------QNLQELYLSNNQLTILP 202

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  L LG NQ++ L ++I  L NL++L   NN L  LP  IG L+KL+ L L
Sbjct: 203 EEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYL 262

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+L +LP EIG L+ LQ L L  NQL +LP+ IG L NL       N L  +P EIG 
Sbjct: 263 SHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPNEIGQ 322

Query: 517 LENLHTLYLNDN 528
           L+NL  L LN+N
Sbjct: 323 LQNLQWLKLNNN 334



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/313 (35%), Positives = 169/313 (53%), Gaps = 27/313 (8%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            L+L+   L  LPKEI     L +LDL +N+   +P  +G L NL  L L  N+L+++P+
Sbjct: 52  VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + +                        L S+  + LS N+ T +P     Q  ++  +N
Sbjct: 112 EIGQ------------------------LQSLQTLILSVNRLTTFPQ-EIGQLKNLQKLN 146

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            ++NQ+  +   I  + ++L K+N+  N L +LP ++G    L EL L  NQ++ L E+I
Sbjct: 147 LDYNQLTTLLQEI-GQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEI 205

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NL+ L+L +N L  LP  IG L+ LK L    N+L  LP EIG L++LQ L L  N
Sbjct: 206 GQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHN 265

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL +LP+ IG L NL  L + +N L ++P+EIG L+NL T +++ N  L  +P E+    
Sbjct: 266 QLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQT-FISFNNQLTMLPNEIGQLQ 324

Query: 543 NLQIMSLDNCPLS 555
           NLQ + L+N  LS
Sbjct: 325 NLQWLKLNNNQLS 337



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 108/309 (34%), Positives = 160/309 (51%), Gaps = 27/309 (8%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  L+L   +L  +P  +  L NL  L L+ N+ +++P+ + +  +L E
Sbjct: 39  DLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQE 98

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            N+    L +LP  +   L S+  + LS N+ T +P                        
Sbjct: 99  LNLWNNQLKNLPKEI-GQLQSLQTLILSVNRLTTFPQE---------------------- 135

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
                + KNL K+N+  N LT+L  ++G    L +LNL  N++  L  +I  L NL+ L 
Sbjct: 136 ---IGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELY 192

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           LSNN L  LP  IG L+ L+ L L +N+L  LP EIG L+ L+ L   +N+L  LP+ IG
Sbjct: 193 LSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIG 252

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L  L YL +  N L ++P+EIG LENL  LYLNDN  L  +P E+    NLQ     N 
Sbjct: 253 QLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQ-LTTLPKEIGQLKNLQTFISFNN 311

Query: 553 PLSQIPSEI 561
            L+ +P+EI
Sbjct: 312 QLTMLPNEI 320



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 176/346 (50%), Gaps = 34/346 (9%)

Query: 145 YVTNLTCLGLAE----NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           ++  L+C   AE     +   L  +L N   +RVL+L   KL  LP  + +L +LK L L
Sbjct: 19  FLIYLSCEIQAEKIKPGTYRDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDL 78

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
             N+ KT+  +I  L NL  L++ +N+++ LP E+G+L++L TL L+ N L   P+EIG 
Sbjct: 79  ANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQSLQTLILSVNRLTTFPQEIGQ 138

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  L+L +N+L  +   +G L +L +L L  NRL+++P  + +  +L E  +    L
Sbjct: 139 LKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQL 198

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
           + LP+  +  L ++  + L  N+ T  P   G       +YS+N E              
Sbjct: 199 TILPEE-IGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNE-------------- 243

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
                        LT LP ++G    L  L L  NQ++ L ++I  L NL+ L L++N L
Sbjct: 244 -------------LTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQL 290

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
             LP  IG L+ L+      N+L  LPNEIG L+ LQ L L +NQL
Sbjct: 291 TTLPKEIGQLKNLQTFISFNNQLTMLPNEIGQLQNLQWLKLNNNQL 336



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 87/249 (34%), Positives = 141/249 (56%), Gaps = 1/249 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +LDL+ +    LP  + +L +L+EL L+ N+L +LP +IG + +L  L L+ N LT
Sbjct: 71  QNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQSLQTLILSVNRLT 130

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           + P  +  L+ L+ L+L +N+L  L   + +L SL+ L L  NR+K +  +I  L NL  
Sbjct: 131 TFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQE 190

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++  LP E+G+LKNL  L L  N L  LPKEIG    L  L   +NEL  +P  
Sbjct: 191 LYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQE 250

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L  L  L LS+N+L ++P+ + +  +L E  +    L++LP   +  L ++      
Sbjct: 251 IGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKE-IGQLKNLQTFISF 309

Query: 341 RNKFTAYPS 349
            N+ T  P+
Sbjct: 310 NNQLTMLPN 318



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 155/316 (49%), Gaps = 26/316 (8%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  +++L +L+ L L  N+  +LP +IG + NL  L L  N L +LP  
Sbjct: 53  LNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ L L  N+L   P  + +L +L+ L L +N++ T+  +I  L +L  L++  
Sbjct: 113 IGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDK 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+++ LP E+G+L+NL  L L++N L  LP+EIG    L  L L  N+L  +P  +G L 
Sbjct: 173 NRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L    N L  +P+ + +   L    +    L++LP   +  L ++  + L+ N+ T
Sbjct: 233 NLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKE-IGQLENLQELYLNDNQLT 291

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                             + KNL      +N LT LP ++G    L
Sbjct: 292 TLPKE-------------------------IGQLKNLQTFISFNNQLTMLPNEIGQLQNL 326

Query: 406 TELNLGTNQISKLSED 421
             L L  NQ+S   E+
Sbjct: 327 QWLKLNNNQLSFQEEE 342



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 120/212 (56%), Gaps = 5/212 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + +T L   + +L  L++L L  N+L +LP++IG + NL  L L+ N LT
Sbjct: 140 KNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLT 199

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP+ +  L+ L+ L L  N+L  LP  + +L +LK+LY   N +  +  +I  L  L  
Sbjct: 200 ILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQY 259

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+L+NL  L L  N L  LPKEIG    L T    +N+L  +P+ 
Sbjct: 260 LYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPNE 319

Query: 281 LGNLINLTRLRLSYNRL-----ESVPETLSKC 307
           +G L NL  L+L+ N+L     E + + L KC
Sbjct: 320 IGQLQNLQWLKLNNNQLSFQEEERIRKLLPKC 351



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 120/244 (49%), Gaps = 23/244 (9%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + + +LP  + +L  L+ L L  N+L + P +IG + NL  L L  N LT
Sbjct: 94  QNLQELNLWNNQLKNLPKEIGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLT 153

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +L   +  LQ L+ L+L  N+L  LP  + +L +L+ LYL  N++  +  +I  L NL  
Sbjct: 154 TLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQA 213

Query: 221 LSMRDNKIRELPPELGELKNL-----------------------VTLDLAHNHLEELPKE 257
           L + DN++  LP E+G+L+NL                         L L+HN L  LPKE
Sbjct: 214 LILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKE 273

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           IG    L  L L  N+L  +P  +G L NL       N+L  +P  + +  +L    +  
Sbjct: 274 IGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPNEIGQLQNLQWLKLNN 333

Query: 318 CALS 321
             LS
Sbjct: 334 NQLS 337



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N   ++ L+L   KL +LP EI  L+ L+ L L +NQ  +LP+ IG L NL 
Sbjct: 38  RDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQ 97

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L++  N L+++P+EIG L++L TL L+ N  L   P E+    NLQ ++LD   L+ + 
Sbjct: 98  ELNLWNNQLKNLPKEIGQLQSLQTLILSVNR-LTTFPQEIGQLKNLQKLNLDYNQLTTLL 156

Query: 559 SEI 561
            EI
Sbjct: 157 QEI 159


>gi|261858318|dbj|BAI45681.1| leucine rich repeat containing 1 [synthetic construct]
          Length = 524

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 194/385 (50%), Gaps = 28/385 (7%)

Query: 175 LDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I+ LPP
Sbjct: 17  IDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPP 76

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT L ++
Sbjct: 77  EIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVN 136

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              L+S+PE +    +L    +    L+ LPD L                         T
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSL-------------------------T 171

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q   +  ++  +N+I  +P  + +   +L  + +  N L+ LP ++G    L  L++  N
Sbjct: 172 QLRRLEELDLGNNEIYNLPESVGALL-HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           ++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L +++N+L  LP  +G  + 
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECES 290

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L  L+L  NQL++LP++IG L  LS L+   N L S+P+EIG   +L    + DN  L  
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNR-LTR 349

Query: 534 IPFELALCSNLQIMSLDNCPLSQIP 558
           IP E++  + L ++ +    L  +P
Sbjct: 350 IPAEVSQATELHVLDVAGNRLLHLP 374



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 207/435 (47%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++ ++D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 7   LWRCNR-HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N++ E+P  +    +L++     N +  +     
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL+ LS+ D  ++ LP  +G L NL +L+L  N L  LP  +     L  LDL +NE
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + N+P+ +G L++L  L L  N+L  +P+ +    +L   +V    L  LP+ + S LTS
Sbjct: 186 IYNLPESVGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI-SGLTS 244

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ +S+                        N ++ IP GI  + K LS + +  N LT
Sbjct: 245 LTDLVISQ------------------------NLLETIPDGI-GKLKKLSILKVDQNRLT 279

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            LP  +G    LTEL                       VL+ N L  LP SIG L+KL  
Sbjct: 280 QLPEAVGECESLTEL-----------------------VLTENQLLTLPKSIGKLKKLSN 316

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+ + NKL SLP EIG    L    ++ N+L  +P  +   T L  L V  N L  +P  
Sbjct: 317 LNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLS 376

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  L+L+DN
Sbjct: 377 LTALK-LKALWLSDN 390



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/314 (35%), Positives = 166/314 (52%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 84  LVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   +  L +L  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESVGALLHLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 204 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE + +C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 264 KLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPKS-IGKLKKLSNLNADRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 323 KLVSLPKEIGGCCSLT-VFCV--RDNRLTRIPAEV-SQATELHVLDVAGNRLLHLPLSL- 377

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 378 TALKLKALWLSDNQ 391



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 168/349 (48%), Gaps = 56/349 (16%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L ELP++      L  L L  NE+  +P  + N + L  L +S N + 
Sbjct: 36  RSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIP 95

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQ 354
            +PE++S C  L   +  G  L+ LP+    L +LT  S+N+I+L            P  
Sbjct: 96  EIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQ---------SLPEN 146

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
             ++Y                     NL+ + +++NLLT LP  L     L EL+LG N+
Sbjct: 147 IGNLY---------------------NLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           I  L E +  L++L+ L L  N L +LP  IGNL+ L CLD+ EN+LE LP EI  L  L
Sbjct: 186 IYNLPESVGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN-- 532
             L++  N L ++P  IG L  LS L V +N L  +PE +G  E+L  L L +N  L   
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLP 305

Query: 533 --------------------NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                               ++P E+  C +L +  + +  L++IP+E+
Sbjct: 306 KSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEV 354


>gi|297288911|ref|XP_001101596.2| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387 homolog [Macaca mulatta]
          Length = 824

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 148/544 (27%), Positives = 251/544 (46%), Gaps = 86/544 (15%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLP-SQIGYVTNLTCLGLAE 156
           CK+   +NL+     +   P  + K+ +++ LYL  N++ +   +  G +  L  L L E
Sbjct: 143 CKDNFTVNLE--AKGLQEFPKDILKIKYVKHLYLDKNQIKTFQGADSGDLLGLEILSLQE 200

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N L+SLP  +  L  LR+L++ HN ++ +P  + +L +++ L+   N I+    D++ L 
Sbjct: 201 NGLSSLPSEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLG 260

Query: 217 NLSMLSMRDNKIRELPPELGELK-----------------------NLVTLDLAHNHLEE 253
           NL +LS+  NK+R +P  L  LK                        L++LDL  N +  
Sbjct: 261 NLEILSLGKNKLRHIPDTLPSLKYLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISS 320

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS-------- 305
           LPKEI     L TL L HN+L  +   +  L+ +  L+L+ N+LE +   +         
Sbjct: 321 LPKEIRELKNLETLLLDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRIL 380

Query: 306 ----KCVHLNEFNV------------------EGCALSSLPDGLLSSLTSINNITLSRNK 343
               + +H+N  N+                   G  ++ +P   + +   I  I L+ NK
Sbjct: 381 INNLRKLHVNRNNMVKITDSISHLNNICSLEFSGNIIAGIPIE-IKNCQKIIKIELNYNK 439

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
              +P  G     S+Y ++   N I +IP  I S +K L  + + +N L        + +
Sbjct: 440 IMYFPL-GLCALDSLYYLSVNGNYISEIPADI-SFSKQLLHLELSENKLLIFSEHFCSLI 497

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            L  L+LG NQI K+   I N+++L VL+L  N  +  P  +  L  L+ LDL EN+L+ 
Sbjct: 498 NLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLRVLDLSENQLQK 557

Query: 464 LPNEIGFLKELQRLILQSNQLV--------------------------SLPRAIGHLTNL 497
           + ++I  LK +Q+L   SNQ +                           LP  + ++T L
Sbjct: 558 ISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQL 617

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
             L +  N ++ IP  IG L NL +L+  +N  ++ IP  L   ++LQ ++L    L+ +
Sbjct: 618 KELDISNNAIREIPRNIGELRNLVSLHAYNNQ-ISYIPPSLLSLNDLQQLNLSGNNLTAL 676

Query: 558 PSEI 561
           PS I
Sbjct: 677 PSAI 680



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 224/481 (46%), Gaps = 57/481 (11%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L++S + I+H+P  + +L ++ +L+ Y N + + PS +  + NL  L L +N L  +PD+
Sbjct: 219 LNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDT 278

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L +L+ LRVL+L +N+L   P  +  L  L  L L  N I ++  +I+ L NL  L +  
Sbjct: 279 LPSLKYLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLLDH 338

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN-------CTMLVTLDLQHNELVNIP 278
           NK+  L  E+ +L  +  L LA N LE +  +I N          L  L +  N +V I 
Sbjct: 339 NKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILINNLRKLHVNRNNMVKIT 398

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           D + +L N+  L  S N +  +P  +  C  + +  +    +   P GL  +L S+  ++
Sbjct: 399 DSISHLNNICSLEFSGNIIAGIPIEIKNCQKIIKIELNYNKIMYFPLGL-CALDSLYYLS 457

Query: 339 LSRNKFTAYPSG-------------------GPTQFTSVYSINF---EHNQIDKIPYGIF 376
           ++ N  +  P+                        F S+ ++ +     NQI KIP  I 
Sbjct: 458 VNGNYISEIPADISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASI- 516

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
           S   +L  + +  N   + P +L T   L  L+L  NQ+ K+S DI NL  ++ L  S+N
Sbjct: 517 SNMISLHVLILCCNKFETFPRELCTLENLRVLDLSENQLQKISSDICNLKGIQKLNFSSN 576

Query: 437 L--------------------------LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
                                      L +LP  + N+ +LK LD+  N +  +P  IG 
Sbjct: 577 QFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGE 636

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L+ L  L   +NQ+  +P ++  L +L  L++  NNL ++P  I  L +L  +  +DN  
Sbjct: 637 LRNLVSLHAYNNQISYIPPSLLSLNDLQQLNLSGNNLTALPSAIYNLFSLKEINFDDNPL 696

Query: 531 L 531
           L
Sbjct: 697 L 697



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 224/450 (49%), Gaps = 34/450 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L K+ + H+P ++  L +L  L L  N+L   P  + ++  L  L L  N ++SLP  
Sbjct: 265 LSLGKNKLRHIPDTLPSLKYLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKE 324

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ-------YLSNL 218
           +  L+ L  L L HNKL  L + +++L  +K L L  N+++ +   I+        ++NL
Sbjct: 325 IRELKNLETLLLDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILINNL 384

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L +  N + ++   +  L N+ +L+ + N +  +P EI NC  ++ ++L +N+++  P
Sbjct: 385 RKLHVNRNNMVKITDSISHLNNICSLEFSGNIIAGIPIEIKNCQKIIKIELNYNKIMYFP 444

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLS---KCVHLN-------EFNVEGCALSSLP---- 324
             L  L +L  L ++ N +  +P  +S   + +HL         F+   C+L +L     
Sbjct: 445 LGLCALDSLYYLSVNGNYISEIPADISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDL 504

Query: 325 --------DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIF 376
                      +S++ S++ + L  NKF  +P    T   ++  ++   NQ+ KI   I 
Sbjct: 505 GKNQIKKIPASISNMISLHVLILCCNKFETFPRELCT-LENLRVLDLSENQLQKISSDI- 562

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT---NQISKLSEDIQNLVNLEVLVL 433
              K + K+N   N     P++L     L +LN+      ++++L  ++ N+  L+ L +
Sbjct: 563 CNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDI 622

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           SNN ++++P +IG LR L  L    N++  +P  +  L +LQ+L L  N L +LP AI +
Sbjct: 623 SNNAIREIPRNIGELRNLVSLHAYNNQISYIPPSLLSLNDLQQLNLSGNNLTALPSAIYN 682

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           L +L  ++  +N L   P EI   + L+T+
Sbjct: 683 LFSLKEINFDDNPLLRPPMEICKGKQLYTI 712



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 147/323 (45%), Gaps = 10/323 (3%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLA 155
           LR    N+  L ++++++  +  S+  L ++  L   GN +A +P +I     +  + L 
Sbjct: 377 LRILINNLRKLHVNRNNMVKITDSISHLNNICSLEFSGNIIAGIPIEIKNCQKIIKIELN 436

Query: 156 ENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYL 215
            N +   P  L  L  L  L +  N ++E+P  +     L  L L  N++         L
Sbjct: 437 YNKIMYFPLGLCALDSLYYLSVNGNYISEIPADISFSKQLLHLELSENKLLIFSEHFCSL 496

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
            NL  L +  N+I+++P  +  + +L  L L  N  E  P+E+     L  LDL  N+L 
Sbjct: 497 INLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLRVLDLSENQLQ 556

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN---VEGCALSSLPDGLLSSLT 332
            I   + NL  + +L  S N+    P  L +   L + N   ++G  L+ LP G LS++T
Sbjct: 557 KISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLP-GELSNMT 615

Query: 333 SINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
            +  + +S N     P   G      S+++ N   NQI  IP  + S   +L ++N+  N
Sbjct: 616 QLKELDISNNAIREIPRNIGELRNLVSLHAYN---NQISYIPPSLLS-LNDLQQLNLSGN 671

Query: 391 LLTSLPLDLGTWVGLTELNLGTN 413
            LT+LP  +     L E+N   N
Sbjct: 672 NLTALPSAIYNLFSLKEINFDDN 694


>gi|429961331|gb|ELA40876.1| hypothetical protein VICG_02090, partial [Vittaforma corneae ATCC
           50505]
          Length = 728

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 147/439 (33%), Positives = 220/439 (50%), Gaps = 39/439 (8%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           I  L LS +++  LPP +E+L +L+ L+L  N+L  LP +IG + +L  L L+ N L  L
Sbjct: 71  IKELVLSNNNLETLPPVMEELENLKVLFLNVNRLKLLPDEIGKLVSLQELCLSCNELKLL 130

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P  +  L+ L+ LDL  N+  + P VV +L SL+ L L  N+++++   I  L NL  L 
Sbjct: 131 PAKMVELKSLQKLDLWKNRFEKFPNVVGELKSLQELDLSGNKLESLPAVIGNLINLQDLD 190

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           + +N ++ LP E+ +LK+L  L+L +N  E LP  IGN T L  LDL HN+L  +PD +G
Sbjct: 191 LHENSLKTLPTEIEKLKSLQKLNLQNNRFESLPAVIGNLTNLQELDLDHNKLKTLPDTIG 250

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L +L  L   +N  ES+P  + +  +L E N +   L  LP   +  L ++  + LS N
Sbjct: 251 ELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDNKLKLLPVE-IGELKNLQKLYLSGN 309

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
                P   GG                            K+L ++++  N L SLP  +G
Sbjct: 310 NLKTLPDTIGG---------------------------LKDLRELSLSGNELESLPAVIG 342

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
             V L  LNL  N++  L + I  L NL  L L  + L+ LP +IG L  L+ L L  NK
Sbjct: 343 NLVNLQYLNLDHNKLKTLPDTIGELKNLRKLYLGGSKLEILPVAIGELENLQKLHLSGNK 402

Query: 461 LESLPNEIGFLKELQRLI-LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           LE+LP EI  L    RL+ L+ N +  +    G  T      VG   L++I  +   L+N
Sbjct: 403 LETLPIEIEKLSGSLRLLNLRGNNISEV--GDGERT------VGWRELRAIFGDRVMLDN 454

Query: 520 LHTLYLNDNTCLNNIPFEL 538
               Y  D   + ++  EL
Sbjct: 455 DSVEYEEDEISVEDVYREL 473



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 131/410 (31%), Positives = 199/410 (48%), Gaps = 62/410 (15%)

Query: 201 RFNRIKTVH-PDIQYL---------SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
           R  R  ++H  DI+Y+         S +  L + +N +  LPP + EL+NL  L L  N 
Sbjct: 44  RNERKISIHSKDIEYIDSYIRGSVKSEIKELVLSNNNLETLPPVMEELENLKVLFLNVNR 103

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           L+ LP EIG    L  L L  NEL  +P  +  L +L +L L  NR E  P  + +   L
Sbjct: 104 LKLLPDEIGKLVSLQELCLSCNELKLLPAKMVELKSLQKLDLWKNRFEKFPNVVGELKSL 163

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK 370
            E ++ G  L SLP  ++ +L ++ ++ L  N     P+                 +I+K
Sbjct: 164 QELDLSGNKLESLP-AVIGNLINLQDLDLHENSLKTLPT-----------------EIEK 205

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           +        K+L K+N+++N   SLP  +G    L EL+L  N++  L + I  L +L +
Sbjct: 206 L--------KSLQKLNLQNNRFESLPAVIGNLTNLQELDLDHNKLKTLPDTIGELKDLRI 257

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI------------ 478
           L   +N  + LP+ +  LR L+ L+ ++NKL+ LP EIG LK LQ+L             
Sbjct: 258 LSFIHNEFESLPTKVIELRNLRELNFDDNKLKLLPVEIGELKNLQKLYLSGNNLKTLPDT 317

Query: 479 -----------LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
                      L  N+L SLP  IG+L NL YL++  N L+++P+ IG L+NL  LYL  
Sbjct: 318 IGGLKDLRELSLSGNELESLPAVIGNLVNLQYLNLDHNKLKTLPDTIGELKNLRKLYLG- 376

Query: 528 NTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQG 577
            + L  +P  +    NLQ + L    L  +P EI     SL  R L ++G
Sbjct: 377 GSKLEILPVAIGELENLQKLHLSGNKLETLPIEIEKLSGSL--RLLNLRG 424



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 132/223 (59%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +LDL ++S+  LP  +EKL  L++L L  N+  SLP+ IG +TNL  L L  N L +
Sbjct: 185 NLQDLDLHENSLKTLPTEIEKLKSLQKLNLQNNRFESLPAVIGNLTNLQELDLDHNKLKT 244

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LPD++  L+ LR+L   HN+   LP  V +L +L+ L    N++K +  +I  L NL  L
Sbjct: 245 LPDTIGELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDNKLKLLPVEIGELKNLQKL 304

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N ++ LP  +G LK+L  L L+ N LE LP  IGN   L  L+L HN+L  +PD +
Sbjct: 305 YLSGNNLKTLPDTIGGLKDLRELSLSGNELESLPAVIGNLVNLQYLNLDHNKLKTLPDTI 364

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
           G L NL +L L  ++LE +P  + +  +L + ++ G  L +LP
Sbjct: 365 GELKNLRKLYLGGSKLEILPVAIGELENLQKLHLSGNKLETLP 407


>gi|24215664|ref|NP_713145.1| hypothetical protein LA_2964 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074856|ref|YP_005989174.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196829|gb|AAN50163.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458646|gb|AER03191.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 426

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 187/360 (51%), Gaps = 53/360 (14%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LP  + KL +L++L+L  N+L +LP +IG + NL  L L EN LT++P  +  LQ L+ L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           +L HN+L  LP  + +L  L+ LYL  N+  ++  +I  L NL  L +  N++  LP E+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI------------------ 277
           G+L+NL +L L HN L  LPKEIG    L  L L++N+L  +                  
Sbjct: 207 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 278 -----PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
                P  +G L NL +L+L  N+L ++P+ + +  +L E +++G  L++LP+  +  L 
Sbjct: 267 KLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPEN-IGQLQ 325

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            +  + L  N+    P+    Q  ++ S++ EHNQ                        L
Sbjct: 326 RLQTLYLGNNQLNFLPN-KVEQLQNLESLDLEHNQ------------------------L 360

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS-SIGNLRKL 451
            +LP ++G    L  LNL  NQ++ L E+I+ L NL+ L L NN    LPS  I  +RKL
Sbjct: 361 NALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN---PLPSEKIERIRKL 417



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 134/386 (34%), Positives = 211/386 (54%), Gaps = 26/386 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS S +T LP  + KL +L+ L L  N+L +LP +IG + NL  L L++N L 
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L L  N+L  +P  + +L +L+ L L  N++ T+  DI+ L  L  
Sbjct: 109 ALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQT 168

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+   +  E+G+L+NL +L L HN L  LPKEIG    L +L L HN+L  +P  
Sbjct: 169 LYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKE 228

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L ++P+ + +  +L +  +    L++LP   +  L ++  + L 
Sbjct: 229 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKE-IGQLQNLQKLKLY 287

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL ++++  N LT+LP ++G
Sbjct: 288 ENQLTTLPKE-------------------------IGQLQNLQELDLDGNQLTTLPENIG 322

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L LG NQ++ L   ++ L NLE L L +N L  LP  IG L+KL+ L+L+ N+
Sbjct: 323 QLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQ 382

Query: 461 LESLPNEIGFLKELQRLILQSNQLVS 486
           L +LP EI  LK L++L L +N L S
Sbjct: 383 LATLPEEIKQLKNLKKLYLHNNPLPS 408



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 134/381 (35%), Positives = 205/381 (53%), Gaps = 26/381 (6%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L G+KL +LP +IG + NL  L L +N L +LP  +  LQ L+ L L  N+L  LP  
Sbjct: 54  LNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMALPEE 113

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +L+ L L  N++  +  +I  L NL  L++  N++  LP ++ +L+ L TL L H
Sbjct: 114 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 173

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N    + KEIG    L +L L HN+L  +P  +G L NL  L L +N+L  +P+ + +  
Sbjct: 174 NQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQ 233

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L   ++    L++LP  +   L ++  + L++NK T  P                    
Sbjct: 234 NLQILHLRNNQLTTLPKEI-GQLQNLQKLLLNKNKLTTLPKE------------------ 274

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
                    + +NL K+ + +N LT+LP ++G    L EL+L  NQ++ L E+I  L  L
Sbjct: 275 -------IGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRL 327

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L L NN L  LP+ +  L+ L+ LDLE N+L +LP EIG L++LQ L L+ NQL +LP
Sbjct: 328 QTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLP 387

Query: 489 RAIGHLTNLSYLSVGENNLQS 509
             I  L NL  L +  N L S
Sbjct: 388 EEIKQLKNLKKLYLHNNPLPS 408



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 206/391 (52%), Gaps = 49/391 (12%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++ + L N Q +R+L+L  +KL  LP  + KL +L++L L  N++  +  +I  L NL  
Sbjct: 40  NITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQ 99

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+L+NL  L L  N L  +PKEIG    L  L+L HN+L  +P+ 
Sbjct: 100 LHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPED 159

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  L  L L +N+  S+ + + +  +L    ++   L+ LP  +             
Sbjct: 160 IEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI------------- 206

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
                        Q  ++ S+  +HNQ++ +P  I  + +NL  +++++N LT+LP ++G
Sbjct: 207 ------------GQLRNLESLGLDHNQLNVLPKEI-GQLQNLQILHLRNNQLTTLPKEIG 253

Query: 401 TW-------------------VG----LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
                                +G    L +L L  NQ++ L ++I  L NL+ L L  N 
Sbjct: 254 QLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQ 313

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L  LP +IG L++L+ L L  N+L  LPN++  L+ L+ L L+ NQL +LP+ IG L  L
Sbjct: 314 LTTLPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKL 373

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
             L++  N L ++PEEI  L+NL  LYL++N
Sbjct: 374 QTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 127/363 (34%), Positives = 199/363 (54%), Gaps = 31/363 (8%)

Query: 203 NRIKTVHPDIQYL----SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
           N ++T + +I  +     N+ +L++  +K+  LP E+G+L+NL  L+L  N L  LPKEI
Sbjct: 32  NEVQTYYRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEI 91

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
           G    L  L L  N+L+ +P+ +G L NL +L+L  N+L ++P+ + +  +L E N+   
Sbjct: 92  GKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHN 151

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
            L++LP+ +                          Q   + ++   HNQ + I   I  +
Sbjct: 152 QLATLPEDI-------------------------EQLQRLQTLYLGHNQFNSILKEI-GQ 185

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
            +NL  + +  N L  LP ++G    L  L L  NQ++ L ++I  L NL++L L NN L
Sbjct: 186 LQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQL 245

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
             LP  IG L+ L+ L L +NKL +LP EIG L+ LQ+L L  NQL +LP+ IG L NL 
Sbjct: 246 TTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQ 305

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N L ++PE IG L+ L TLYL +N  LN +P ++    NL+ + L++  L+ +P
Sbjct: 306 ELDLDGNQLTTLPENIGQLQRLQTLYLGNNQ-LNFLPNKVEQLQNLESLDLEHNQLNALP 364

Query: 559 SEI 561
            EI
Sbjct: 365 KEI 367


>gi|260819403|ref|XP_002605026.1| hypothetical protein BRAFLDRAFT_124131 [Branchiostoma floridae]
 gi|229290356|gb|EEN61036.1| hypothetical protein BRAFLDRAFT_124131 [Branchiostoma floridae]
          Length = 667

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 151/500 (30%), Positives = 232/500 (46%), Gaps = 54/500 (10%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGY-VTNLTCLGLAEN 157
           KEEN L L L    ++  P SV  LTH+E+L L  N L  LP ++ + +T+L  L +  N
Sbjct: 39  KEENHL-LCLKSLDLSSFPESVLNLTHVEKLILDHNSLTFLPGELCHTLTHLCVLSVMGN 97

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L +LP    NL  LR L    N L ELP     L  L++LYL  N ++T+  D  +L +
Sbjct: 98  DLETLPTLFGNLTLLRELHAGENCLQELPDSFSDLKDLRLLYLTGNELRTLPSDFGHLEH 157

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L + +N +++LP   G L+ L   D ++N LE LP+  G  + L  L+L  N+L  +
Sbjct: 158 LETLMIDENHLKKLPKTFGSLRRLERFDASNNKLETLPESFGGLSRLKILNLSTNKLSCL 217

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P+  G+L  L  + LS N L  + + L     L +  V+   L  LP   +  L+SI  +
Sbjct: 218 PESFGDLPQLQEVELSGNSLSFLTKDLKSSHCLRKLYVDNNVLKELPP-WVGHLSSIQEM 276

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA-KNLSKVNMKDNLLTSLP 396
           +L  NK    P                      +P    +R+ + L  +++  N +T+LP
Sbjct: 277 SLRDNKLMNQP----------------------LPESFPARSGRTLRLLDLSGNFITALP 314

Query: 397 LDLGTWVGLTELNLGT-------------NQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
             LG    L  L+LG+             N +  L E+   L +L+ L L  N L  LP 
Sbjct: 315 ASLGQLGSLESLHLGSAIGELERRHFQNGNWLCALPENFGRLRHLKTLHLDENQLTHLPG 374

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
           S G+L  L+ LD+ +N L+ LP+    L  LQ           LP   G L++L  L + 
Sbjct: 375 SFGSLGSLEFLDVGQNWLKELPDSFCELSNLQL----------LPSNFGRLSSLVDLRLD 424

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV- 562
            N L  +PE    L  L TL L  N  L  +P  L   +++  + +D    S +P E+V 
Sbjct: 425 NNMLGELPESFAELRQLRTLDLFCNE-LREVPGALKHLTSITRLDMDKNKFS-LPPELVP 482

Query: 563 --VGGPSLIIRYLKMQGPYR 580
             +  P+   R  +++  +R
Sbjct: 483 NIIFKPTYAARDPRLKDTWR 502



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 130/263 (49%), Gaps = 4/263 (1%)

Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           LSS P+ +L+ LT +  + L  N  T  P       T +  ++   N ++ +P  +F   
Sbjct: 52  LSSFPESVLN-LTHVEKLILDHNSLTFLPGELCHTLTHLCVLSVMGNDLETLPT-LFGNL 109

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
             L +++  +N L  LP        L  L L  N++  L  D  +L +LE L++  N LK
Sbjct: 110 TLLRELHAGENCLQELPDSFSDLKDLRLLYLTGNELRTLPSDFGHLEHLETLMIDENHLK 169

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
           KLP + G+LR+L+  D   NKLE+LP   G L  L+ L L +N+L  LP + G L  L  
Sbjct: 170 KLPKTFGSLRRLERFDASNNKLETLPESFGGLSRLKILNLSTNKLSCLPESFGDLPQLQE 229

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL-DNCPLSQIP 558
           + +  N+L  + +++ +   L  LY+ DN  L  +P  +   S++Q MSL DN  ++Q  
Sbjct: 230 VELSGNSLSFLTKDLKSSHCLRKLYV-DNNVLKELPPWVGHLSSIQEMSLRDNKLMNQPL 288

Query: 559 SEIVVGGPSLIIRYLKMQGPYRT 581
            E         +R L + G + T
Sbjct: 289 PESFPARSGRTLRLLDLSGNFIT 311


>gi|421120079|ref|ZP_15580393.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347165|gb|EKO98084.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 426

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 187/360 (51%), Gaps = 53/360 (14%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LP  + KL +L++L+L  N+L +LP +IG + NL  L L EN LT++P  +  LQ L+ L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           +L HN+L  LP  + +L  L+ LYL  N+  ++  +I  L NL  L +  N++  LP E+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI------------------ 277
           G+L+NL +L L HN L  LPKEIG    L  L L++N+L  +                  
Sbjct: 207 GQLQNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 278 -----PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
                P+ +G L NL +L+L  N+L ++P+ + +  +L E +++G  L +LP+  +  L 
Sbjct: 267 KLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPEN-IGQLQ 325

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            +  + L  N+    P+    Q  ++ S++ EHNQ                        L
Sbjct: 326 RLQTLYLGNNQLNVLPN-KVEQLQNLESLDLEHNQ------------------------L 360

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS-SIGNLRKL 451
            +LP ++G    L  LNL  NQ++ L E+I+ L NL+ L L NN    LPS  I  +RKL
Sbjct: 361 NALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN---PLPSEKIERIRKL 417



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 133/386 (34%), Positives = 211/386 (54%), Gaps = 26/386 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS S +T LP  + KL +L+ L L  N+L +LP +IG + NL  L L++N L 
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L L  N+L  +P  + +L +L+ L L  N++ T+  DI+ L  L  
Sbjct: 109 ALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQT 168

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+   +  E+G+L+NL +L L HN L  LPKEIG    L +L L HN+L  +P  
Sbjct: 169 LYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLQNLESLGLDHNQLNVLPKE 228

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L ++P+ + +  +L +  +    L++LP+  +  L ++  + L 
Sbjct: 229 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQLQNLQKLKLY 287

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL ++++  N L +LP ++G
Sbjct: 288 ENQLTTLPKE-------------------------IGQLQNLQELDLDGNQLITLPENIG 322

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L LG NQ++ L   ++ L NLE L L +N L  LP  IG L+KL+ L+L+ N+
Sbjct: 323 QLQRLQTLYLGNNQLNVLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQ 382

Query: 461 LESLPNEIGFLKELQRLILQSNQLVS 486
           L +LP EI  LK L++L L +N L S
Sbjct: 383 LATLPEEIKQLKNLKKLYLHNNPLPS 408



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 134/381 (35%), Positives = 204/381 (53%), Gaps = 26/381 (6%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L G+KL +LP +IG + NL  L L +N L +LP  +  LQ L+ L L  N+L  LP  
Sbjct: 54  LNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMALPEE 113

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +L+ L L  N++  +  +I  L NL  L++  N++  LP ++ +L+ L TL L H
Sbjct: 114 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 173

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N    + KEIG    L +L L HN+L  +P  +G L NL  L L +N+L  +P+ + +  
Sbjct: 174 NQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLQNLESLGLDHNQLNVLPKEIGQLQ 233

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L   ++    L++LP  +   L ++  + L++NK T  P                    
Sbjct: 234 NLQILHLRNNQLTTLPKEI-GQLQNLQKLLLNKNKLTTLPEE------------------ 274

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
                    + +NL K+ + +N LT+LP ++G    L EL+L  NQ+  L E+I  L  L
Sbjct: 275 -------IGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRL 327

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L L NN L  LP+ +  L+ L+ LDLE N+L +LP EIG L++LQ L L+ NQL +LP
Sbjct: 328 QTLYLGNNQLNVLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLP 387

Query: 489 RAIGHLTNLSYLSVGENNLQS 509
             I  L NL  L +  N L S
Sbjct: 388 EEIKQLKNLKKLYLHNNPLPS 408



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 208/397 (52%), Gaps = 49/397 (12%)

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           A+    ++ + L N Q +R+L+L  +KL  LP  + KL +L++L L  N++  +  +I  
Sbjct: 34  AQTYYRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGK 93

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL  L +  N++  LP E+G+L+NL  L L  N L  +PKEIG    L  L+L HN+L
Sbjct: 94  LQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQL 153

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+ +  L  L  L L +N+  S+ + + +  +L    ++   L+ LP  +       
Sbjct: 154 ATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI------- 206

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                              Q  ++ S+  +HNQ++ +P  I  + +NL  +++++N LT+
Sbjct: 207 ------------------GQLQNLESLGLDHNQLNVLPKEI-GQLQNLQILHLRNNQLTT 247

Query: 395 LPLDLGTW-------------------VG----LTELNLGTNQISKLSEDIQNLVNLEVL 431
           LP ++G                     +G    L +L L  NQ++ L ++I  L NL+ L
Sbjct: 248 LPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQEL 307

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  LP +IG L++L+ L L  N+L  LPN++  L+ L+ L L+ NQL +LP+ I
Sbjct: 308 DLDGNQLITLPENIGQLQRLQTLYLGNNQLNVLPNKVEQLQNLESLDLEHNQLNALPKEI 367

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G L  L  L++  N L ++PEEI  L+NL  LYL++N
Sbjct: 368 GKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 124/346 (35%), Positives = 191/346 (55%), Gaps = 27/346 (7%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
            N+ +L++  +K+  LP E+G+L+NL  L+L  N L  LPKEIG    L  L L  N+L+
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            +P+ +G L NL +L+L  N+L ++P+ + +  +L E N+    L++LP+ +        
Sbjct: 109 ALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDI-------- 160

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
                             Q   + ++   HNQ + I   I  + +NL  + +  N L  L
Sbjct: 161 -----------------EQLQRLQTLYLGHNQFNSILKEI-GQLQNLESLGLDHNQLNVL 202

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L  L L  NQ++ L ++I  L NL++L L NN L  LP  IG L+ L+ L 
Sbjct: 203 PKEIGQLQNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLL 262

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L +NKL +LP EIG L+ LQ+L L  NQL +LP+ IG L NL  L +  N L ++PE IG
Sbjct: 263 LNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIG 322

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L+ L TLYL +N  LN +P ++    NL+ + L++  L+ +P EI
Sbjct: 323 QLQRLQTLYLGNNQ-LNVLPNKVEQLQNLESLDLEHNQLNALPKEI 367



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 147/309 (47%), Gaps = 50/309 (16%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           NI ++L N  N+  L LS ++L ++P  + K  +L   N++   L +LP  +   L ++ 
Sbjct: 40  NITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEI-GKLQNLQ 98

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + LS+N+  A P                             + +NL K+ + +N LT++
Sbjct: 99  QLHLSKNQLMALPEE-------------------------IGQLQNLQKLKLYENQLTAI 133

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L ELNL  NQ++ L EDI+ L  L+ L L +N    +   IG L+ L+ L 
Sbjct: 134 PKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLG 193

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L+ N+L  LP EIG L+ L+ L L  NQL  LP+ IG L NL  L +  N L ++P+EIG
Sbjct: 194 LDHNQLNVLPKEIGQLQNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIG 253

Query: 516 -----------------------TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                                   L+NL  L L +N  L  +P E+    NLQ + LD  
Sbjct: 254 QLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGN 312

Query: 553 PLSQIPSEI 561
            L  +P  I
Sbjct: 313 QLITLPENI 321


>gi|344272593|ref|XP_003408116.1| PREDICTED: protein LAP2 [Loxodonta africana]
          Length = 1304

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 205/419 (48%), Gaps = 31/419 (7%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P                        +I+ 
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPE-----------------------NIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N        G +   ++  +    N + ++P  I S  KN++ + + +N L  
Sbjct: 233 TYLDVSKNNIEMVEE-GISACENLQDLLLSSNSLQQLPETIGS-LKNVTTLKIDENQLMY 290

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS--SIGNLRKLK 452
           LP  +G    + EL+   N++  L   I  L N+      +N L++LP+  +IG+ + + 
Sbjct: 291 LPDSVGGLTSVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPTRGTIGSWKNIT 350

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
            L L  NKLE+LP E+G +++L+ + L  N+L +LP +   L  L+ + + +N  QS P
Sbjct: 351 VLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN--QSKP 407



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 162/338 (47%), Gaps = 28/338 (8%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           + ++P E+    K L  L L  N +EELPK++ NC  L  L L  N+L  +P  + NLIN
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG  S L ++  + L+      
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGF-SQLLNLTQLYLNDAFLEF 152

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+                          F R   L  + +++N L  LP  +     L 
Sbjct: 153 LPAN-------------------------FGRLTKLQILELRENQLKMLPKTMNRLTQLE 187

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L+LG+N+ +++ E ++ L  L+   +  N L  +P  IG+L++L  LD+ +N +E +  
Sbjct: 188 RLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEE 247

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            I   + LQ L+L SN L  LP  IG L N++ L + EN L  +P+ +G L ++  L  +
Sbjct: 248 GISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSVGGLTSVEELDCS 307

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVG 564
            N  +  +P  +   +N++  + D+  L Q+P+   +G
Sbjct: 308 FNE-VEALPSSIGQLTNIRTFAADHNYLQQLPTRGTIG 344



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 160/311 (51%), Gaps = 11/311 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L ++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSVGGLTSVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQ 335

Query: 322 SLPD-GLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
            LP  G + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ 
Sbjct: 336 QLPTRGTIGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKL 392

Query: 380 KNLSKVNMKDN 390
           + L+ + + DN
Sbjct: 393 QQLTAMWLSDN 403



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 185/391 (47%), Gaps = 50/391 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ I   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 93  NLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEF 152

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +L++L+LR N+L  LP  + +LT L+ L L  N    V   ++ LS L   
Sbjct: 153 LPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEF 212

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M  N++  +P  +G LK L  LD++ N++E + + I  C  L  L L  N L  +P+ +
Sbjct: 213 WMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETI 272

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G+L N+T L++  N+L  +P++                        +  LTS+  +  S 
Sbjct: 273 GSLKNVTTLKIDENQLMYLPDS------------------------VGGLTSVEELDCSF 308

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIP-YGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           N+  A PS    Q T++ +   +HN + ++P  G     KN++ + +  N L +LP ++G
Sbjct: 309 NEVEALPS-SIGQLTNIRTFAADHNYLQQLPTRGTIGSWKNITVLFLHSNKLETLPEEMG 367

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
                               D+Q    L+V+ LS+N LK LP S   L++L  + L +N+
Sbjct: 368 --------------------DMQ---KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQ 404

Query: 461 LESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
            + L P +     E Q+++L +      PR 
Sbjct: 405 SKPLIPLQKETDSETQKMVLTNYMFPQQPRT 435


>gi|417760348|ref|ZP_12408374.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774427|ref|ZP_12422292.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418675361|ref|ZP_13236652.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943915|gb|EKN89506.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410575760|gb|EKQ38777.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410577523|gb|EKQ45393.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 412

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 187/360 (51%), Gaps = 53/360 (14%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LP  + KL +L++L+L  N+L +LP +IG + NL  L L EN LT++P  +  LQ L+ L
Sbjct: 73  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 132

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           +L HN+L  LP  + +L  L+ LYL  N+  ++  +I  L NL  L +  N++  LP E+
Sbjct: 133 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 192

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI------------------ 277
           G+L+NL +L L HN L  LPKEIG    L  L L++N+L  +                  
Sbjct: 193 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 252

Query: 278 -----PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
                P+ +G L NL +L+L  N+L ++P+ + +  +L E +++G  L +LP+  +  L 
Sbjct: 253 KLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPEN-IGQLQ 311

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            +  + L  N+    P+    Q  ++ S++ EHNQ                        L
Sbjct: 312 RLQTLYLGNNQLNFLPN-KVEQLQNLESLDLEHNQ------------------------L 346

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS-SIGNLRKL 451
            +LP ++G    L  LNL  NQ++ L E+I+ L NL+ L L NN    LPS  I  +RKL
Sbjct: 347 NALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN---PLPSEKIERIRKL 403



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 133/386 (34%), Positives = 211/386 (54%), Gaps = 26/386 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS S +T LP  + KL +L+ L L  N+L +LP +IG + NL  L L++N L 
Sbjct: 35  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 94

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L L  N+L  +P  + +L +L+ L L  N++ T+  DI+ L  L  
Sbjct: 95  ALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQT 154

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+   +  E+G+L+NL +L L HN L  LPKEIG    L +L L HN+L  +P  
Sbjct: 155 LYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKE 214

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L ++P+ + +  +L +  +    L++LP+  +  L ++  + L 
Sbjct: 215 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQLQNLQKLKLY 273

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL ++++  N L +LP ++G
Sbjct: 274 ENQLTTLPKE-------------------------IGQLQNLQELDLDGNQLITLPENIG 308

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L LG NQ++ L   ++ L NLE L L +N L  LP  IG L+KL+ L+L+ N+
Sbjct: 309 QLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQ 368

Query: 461 LESLPNEIGFLKELQRLILQSNQLVS 486
           L +LP EI  LK L++L L +N L S
Sbjct: 369 LATLPEEIKQLKNLKKLYLHNNPLPS 394



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 134/381 (35%), Positives = 204/381 (53%), Gaps = 26/381 (6%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L G+KL +LP +IG + NL  L L +N L +LP  +  LQ L+ L L  N+L  LP  
Sbjct: 40  LNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMALPEE 99

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +L+ L L  N++  +  +I  L NL  L++  N++  LP ++ +L+ L TL L H
Sbjct: 100 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 159

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N    + KEIG    L +L L HN+L  +P  +G L NL  L L +N+L  +P+ + +  
Sbjct: 160 NQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQ 219

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L   ++    L++LP  +   L ++  + L++NK T  P                    
Sbjct: 220 NLQILHLRNNQLTTLPKEI-GQLQNLQKLLLNKNKLTTLPEE------------------ 260

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
                    + +NL K+ + +N LT+LP ++G    L EL+L  NQ+  L E+I  L  L
Sbjct: 261 -------IGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRL 313

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L L NN L  LP+ +  L+ L+ LDLE N+L +LP EIG L++LQ L L+ NQL +LP
Sbjct: 314 QTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLP 373

Query: 489 RAIGHLTNLSYLSVGENNLQS 509
             I  L NL  L +  N L S
Sbjct: 374 EEIKQLKNLKKLYLHNNPLPS 394



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 208/397 (52%), Gaps = 49/397 (12%)

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           A+    ++ + L N Q +R+L+L  +KL  LP  + KL +L++L L  N++  +  +I  
Sbjct: 20  AQTYYRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGK 79

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL  L +  N++  LP E+G+L+NL  L L  N L  +PKEIG    L  L+L HN+L
Sbjct: 80  LQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQL 139

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+ +  L  L  L L +N+  S+ + + +  +L    ++   L+ LP  +       
Sbjct: 140 ATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI------- 192

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                              Q  ++ S+  +HNQ++ +P  I  + +NL  +++++N LT+
Sbjct: 193 ------------------GQLRNLESLGLDHNQLNVLPKEI-GQLQNLQILHLRNNQLTT 233

Query: 395 LPLDLGTW-------------------VG----LTELNLGTNQISKLSEDIQNLVNLEVL 431
           LP ++G                     +G    L +L L  NQ++ L ++I  L NL+ L
Sbjct: 234 LPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQEL 293

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  LP +IG L++L+ L L  N+L  LPN++  L+ L+ L L+ NQL +LP+ I
Sbjct: 294 DLDGNQLITLPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEI 353

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G L  L  L++  N L ++PEEI  L+NL  LYL++N
Sbjct: 354 GKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 390



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 124/346 (35%), Positives = 191/346 (55%), Gaps = 27/346 (7%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
            N+ +L++  +K+  LP E+G+L+NL  L+L  N L  LPKEIG    L  L L  N+L+
Sbjct: 35  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 94

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            +P+ +G L NL +L+L  N+L ++P+ + +  +L E N+    L++LP+ +        
Sbjct: 95  ALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDI-------- 146

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
                             Q   + ++   HNQ + I   I  + +NL  + +  N L  L
Sbjct: 147 -----------------EQLQRLQTLYLGHNQFNSILKEI-GQLQNLESLGLDHNQLNVL 188

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L  L L  NQ++ L ++I  L NL++L L NN L  LP  IG L+ L+ L 
Sbjct: 189 PKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLL 248

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L +NKL +LP EIG L+ LQ+L L  NQL +LP+ IG L NL  L +  N L ++PE IG
Sbjct: 249 LNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIG 308

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L+ L TLYL +N  LN +P ++    NL+ + L++  L+ +P EI
Sbjct: 309 QLQRLQTLYLGNNQ-LNFLPNKVEQLQNLESLDLEHNQLNALPKEI 353



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 147/309 (47%), Gaps = 50/309 (16%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           NI ++L N  N+  L LS ++L ++P  + K  +L   N++   L +LP  +   L ++ 
Sbjct: 26  NITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEI-GKLQNLQ 84

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + LS+N+  A P                             + +NL K+ + +N LT++
Sbjct: 85  QLHLSKNQLMALPEE-------------------------IGQLQNLQKLKLYENQLTAI 119

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L ELNL  NQ++ L EDI+ L  L+ L L +N    +   IG L+ L+ L 
Sbjct: 120 PKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLG 179

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L+ N+L  LP EIG L+ L+ L L  NQL  LP+ IG L NL  L +  N L ++P+EIG
Sbjct: 180 LDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIG 239

Query: 516 -----------------------TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                                   L+NL  L L +N  L  +P E+    NLQ + LD  
Sbjct: 240 QLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGN 298

Query: 553 PLSQIPSEI 561
            L  +P  I
Sbjct: 299 QLITLPENI 307


>gi|410294462|gb|JAA25831.1| leucine rich repeat containing 1 [Pan troglodytes]
          Length = 524

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 194/385 (50%), Gaps = 28/385 (7%)

Query: 175 LDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I+ LPP
Sbjct: 17  IDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPP 76

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT L ++
Sbjct: 77  EIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVN 136

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              L+S+PE +    +L    +    L+ LPD L                         T
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSL-------------------------T 171

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L++  N
Sbjct: 172 QLRRLEELDLGNNEIYNLPESIGALL-HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           ++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L +++N+L  LP  +G  + 
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCES 290

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L  L+L  NQL++LP++IG L  LS L+   N L S+P+EIG   +L    + DN  L  
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGGCSLTVFCVRDNR-LTR 349

Query: 534 IPFELALCSNLQIMSLDNCPLSQIP 558
           IP E++  + L ++ +    L  +P
Sbjct: 350 IPAEVSQATELHVLDVAGNRLLHLP 374



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 207/435 (47%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++ ++D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 7   LWRCNR-HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N++ E+P  +    +L++     N +  +     
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL+ LS+ D  ++ LP  +G L NL +L+L  N L  LP  +     L  LDL +NE
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + N+P+ +G L++L  L L  N+L  +P+ +    +L   +V    L  LP+ + S LTS
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI-SGLTS 244

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ +S+                        N ++ IP GI  + K LS + +  N LT
Sbjct: 245 LTDLVISQ------------------------NLLETIPDGI-GKLKKLSILKVDQNRLT 279

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            LP  +G    LTEL                       VL+ N L  LP SIG L+KL  
Sbjct: 280 QLPEAVGDCESLTEL-----------------------VLTENQLLTLPKSIGKLKKLSN 316

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+ + NKL SLP EIG    L    ++ N+L  +P  +   T L  L V  N L  +P  
Sbjct: 317 LNADRNKLVSLPKEIGGGCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLS 376

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  L+L+DN
Sbjct: 377 LTALK-LKALWLSDN 390



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/314 (35%), Positives = 165/314 (52%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 84  LVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 204 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE +  C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 264 KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKS-IGKLKKLSNLNADRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 323 KLVSLPKEIGGGCSLT-VFCV--RDNRLTRIPAEV-SQATELHVLDVAGNRLLHLPLSL- 377

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 378 TALKLKALWLSDNQ 391



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 122/362 (33%), Positives = 175/362 (48%), Gaps = 59/362 (16%)

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
           +Y  +L  L +  N++RELP +  +L  L  L L+ N ++ LP EI N   LV LD+  N
Sbjct: 33  RYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRN 92

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL--LSS 330
           E   IP+                    +PE++S C  L   +  G  L+ LP+    L +
Sbjct: 93  E---IPE--------------------IPESISFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 331 LT--SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           LT  S+N+I+L            P    ++Y                     NL+ + ++
Sbjct: 130 LTCLSVNDISLQ---------SLPENIGNLY---------------------NLASLELR 159

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
           +NLLT LP  L     L EL+LG N+I  L E I  L++L+ L L  N L +LP  IGNL
Sbjct: 160 ENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNL 219

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
           + L CLD+ EN+LE LP EI  L  L  L++  N L ++P  IG L  LS L V +N L 
Sbjct: 220 KNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLT 279

Query: 509 SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSL 568
            +PE +G  E+L  L L +N  L  +P  +     L  ++ D   L  +P EI  GG SL
Sbjct: 280 QLPEAVGDCESLTELVLTENQLL-TLPKSIGKLKKLSNLNADRNKLVSLPKEI-GGGCSL 337

Query: 569 II 570
            +
Sbjct: 338 TV 339


>gi|436836854|ref|YP_007322070.1| Protein LAP2 Erbb2-interacting protein [Fibrella aestuarina BUZ 2]
 gi|384068267|emb|CCH01477.1| Protein LAP2 Erbb2-interacting protein [Fibrella aestuarina BUZ 2]
          Length = 801

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 139/455 (30%), Positives = 219/455 (48%), Gaps = 71/455 (15%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           KEE  ++LD + + +T L            L L G +LA+LP  +     L  L L +  
Sbjct: 304 KEEKAVDLDSTLAGVTTL----------RHLTLDGIRLAALPRSLLANPQLVTLSLVDCE 353

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP+SL NL +L  L L  N L  LP +V +LT L+                      
Sbjct: 354 LTALPESLDNLTRLEELHLDRNPLQTLPALVGRLTRLR---------------------- 391

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             LS+   ++ ELP  LG+L  L  L    NHL  LP+ +G    L  L++  N+L ++P
Sbjct: 392 -QLSLDRCELTELPATLGQLGQLTYLTATQNHLTRLPESLGQLRQLRDLNVSMNDLTDLP 450

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             L  L  L RL    N+L   P  L++  HL    +    L+++PD +   L  + ++T
Sbjct: 451 GSLRQLPALERLAAFTNQLTRFPVELAQVRHLY---LSDNQLTNVPDAV-GELRRLRSLT 506

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           L+ N  T+ P                  Q+D           +L  + + DN LT+LP  
Sbjct: 507 LAGNPLTSLPE--------------TIGQLD-----------SLEMLTLGDNQLTALPQR 541

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L+ L LG N++ +L E I +L +L  +V+ NN L+ LP+S+G  ++L+   L+ 
Sbjct: 542 IGQLSRLSWLELGNNRLRELPESIGSLTSLTAVVIGNNPLEILPASVGGWQRLRTASLQL 601

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
             L  LP++IG  ++L+ L ++S+QLV LP A+    +L+ L++  N L  +PE +G L 
Sbjct: 602 PYLRRLPDQIGNWQQLEDLTIESDQLVLLPDALTDCRSLTVLTLSGNKLIGLPERMGKLT 661

Query: 519 NLHTLYL---NDNTC------LNNIPFELALCSNL 544
            L  L +   +D+T       L N+P +L  C  L
Sbjct: 662 RLRQLVVSARSDSTTGSGLGRLTNLPADLVNCPAL 696



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 184/406 (45%), Gaps = 68/406 (16%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +L++S + +T LP S+ +L  LE L  + N+L   P ++  V +L    L++N LT++PD
Sbjct: 438 DLNVSMNDLTDLPGSLRQLPALERLAAFTNQLTRFPVELAQVRHLY---LSDNQLTNVPD 494

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
           ++  L++LR L L  N L  LP  + +L SL++L L  N++  +   I  LS LS L + 
Sbjct: 495 AVGELRRLRSLTLAGNPLTSLPETIGQLDSLEMLTLGDNQLTALPQRIGQLSRLSWLELG 554

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           +N++RELP  +G L +L  + + +N LE LP  +G    L T  LQ   L  +PD +GN 
Sbjct: 555 NNRLRELPESIGSLTSLTAVVIGNNPLEILPASVGGWQRLRTASLQLPYLRRLPDQIGNW 614

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             L  L +  ++L  +P+ L+ C  L    + G  L  LP+ +   LT +  + +S    
Sbjct: 615 QQLEDLTIESDQLVLLPDALTDCRSLTVLTLSGNKLIGLPERM-GKLTRLRQLVVSARSD 673

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
           +   SG                           R             LT+LP DL     
Sbjct: 674 STTGSG-------------------------LGR-------------LTNLPADLVNCPA 695

Query: 405 LTELNLGTNQISKLSEDIQ---NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
           LT+L +   Q     + ++    L  L+ L   N  +  L   + +   L  L+L +N+L
Sbjct: 696 LTDLTVQQQQAFDGGDALRLSAALPRLQTLSFINCGITDLSGIVWSKLSLVNLNLMQNRL 755

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
             LPN                 L+ +P       NL+ +++ +NNL
Sbjct: 756 SQLPNS----------------LLDMP-------NLTQINLADNNL 778



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 147/301 (48%), Gaps = 14/301 (4%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
            + +L LS + +T++P +V +L  L  L L GN L SLP  IG + +L  L L +N LT+
Sbjct: 478 QVRHLYLSDNQLTNVPDAVGELRRLRSLTLAGNPLTSLPETIGQLDSLEMLTLGDNQLTA 537

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L +L  L+L +N+L ELP  +  LTSL  + +  N ++ +   +     L   
Sbjct: 538 LPQRIGQLSRLSWLELGNNRLRELPESIGSLTSLTAVVIGNNPLEILPASVGGWQRLRTA 597

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           S++   +R LP ++G  + L  L +  + L  LP  + +C  L  L L  N+L+ +P+ +
Sbjct: 598 SLQLPYLRRLPDQIGNWQQLEDLTIESDQLVLLPDALTDCRSLTVLTLSGNKLIGLPERM 657

Query: 282 GNLINLTRLRLS----------YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL--S 329
           G L  L +L +S            RL ++P  L  C  L +  V+        D L   +
Sbjct: 658 GKLTRLRQLVVSARSDSTTGSGLGRLTNLPADLVNCPALTDLTVQQQQAFDGGDALRLSA 717

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
           +L  +  ++      T   SG      S+ ++N   N++ ++P  +     NL+++N+ D
Sbjct: 718 ALPRLQTLSFINCGITDL-SGIVWSKLSLVNLNLMQNRLSQLPNSLLD-MPNLTQINLAD 775

Query: 390 N 390
           N
Sbjct: 776 N 776



 Score = 46.6 bits (109), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 20/260 (7%)

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRN--------KFTAYPSGGPTQFTSVYSINFEHNQ 367
           E   L +LP      LTS+  +TLS N        + +  P+    +  ++Y  +     
Sbjct: 154 ETTFLPTLPQTGWDRLTSVRELTLSTNLNVRQALSQLSRLPA---LESLTLYLWDTSAEL 210

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
                + +  + + L+ VN  D     L + LG    L +L   + Q++ ++    +L  
Sbjct: 211 PTAADWALLPQLRELT-VNGFDTRPDWL-IGLGRLTNLRKLTFSSGQLADMNALFTSLQR 268

Query: 428 LEVLVLSN-NLLKKLPS-SIGNLRKLKCLDL----EENKLESLPNEIGFLKELQRLILQS 481
           LE L L       +LP   +  L  L+ L L    +E K   L + +  +  L+ L L  
Sbjct: 269 LETLDLDYVGPADRLPRLRLAALPALQSLHLSRYGKEEKAVDLDSTLAGVTTLRHLTLDG 328

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
            +L +LPR++     L  LS+ +  L ++PE +  L  L  L+L+ N  L  +P  +   
Sbjct: 329 IRLAALPRSLLANPQLVTLSLVDCELTALPESLDNLTRLEELHLDRNP-LQTLPALVGRL 387

Query: 542 SNLQIMSLDNCPLSQIPSEI 561
           + L+ +SLD C L+++P+ +
Sbjct: 388 TRLRQLSLDRCELTELPATL 407


>gi|456824980|gb|EMF73376.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 426

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 190/365 (52%), Gaps = 55/365 (15%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LP  + KL +L++L+L  N+L +LP +IG + NL  L L EN LT++P  +  LQ L+ L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           +L HN+L  LP  + +L  L+ LYL  N+  ++  +I  L NL  L +  N++  LP E+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI------------------ 277
           G+L+NL +L L HN L  LPKEIG    L  L L++N+L  +                  
Sbjct: 207 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 278 -----PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
                P+ +G L NL +L+L  N+L ++P+ + +  +L E +++G  L +LP+  +  L 
Sbjct: 267 KLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPEN-IGQLQ 325

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            +  + L  N+    P+    Q  ++ S++ EHNQ                        L
Sbjct: 326 RLQTLYLGNNQLNFLPN-KVEQLQNLESLDLEHNQ------------------------L 360

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS-SIGNLRKL 451
            +LP ++G    L  LNL  NQ++ L E+I+ L NL+ L L NN    LPS  I  +RKL
Sbjct: 361 NALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN---PLPSEKIERIRKL 417

Query: 452 --KCL 454
             +C+
Sbjct: 418 LPQCI 422



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 133/386 (34%), Positives = 211/386 (54%), Gaps = 26/386 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS S +T LP  + KL +L+ L L  N+L +LP +IG + NL  L L++N L 
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L L  N+L  +P  + +L +L+ L L  N++ T+  DI+ L  L  
Sbjct: 109 ALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQT 168

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+   +  E+G+L+NL +L L HN L  LPKEIG    L +L L HN+L  +P  
Sbjct: 169 LYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKE 228

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L ++P+ + +  +L +  +    L++LP+  +  L ++  + L 
Sbjct: 229 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQLQNLQKLKLY 287

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL ++++  N L +LP ++G
Sbjct: 288 ENQLTTLPKE-------------------------IGQLQNLQELDLDGNQLITLPENIG 322

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L LG NQ++ L   ++ L NLE L L +N L  LP  IG L+KL+ L+L+ N+
Sbjct: 323 QLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQ 382

Query: 461 LESLPNEIGFLKELQRLILQSNQLVS 486
           L +LP EI  LK L++L L +N L S
Sbjct: 383 LATLPEEIKQLKNLKKLYLHNNPLPS 408



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 134/381 (35%), Positives = 204/381 (53%), Gaps = 26/381 (6%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L G+KL +LP +IG + NL  L L +N L +LP  +  LQ L+ L L  N+L  LP  
Sbjct: 54  LNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMALPEE 113

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +L+ L L  N++  +  +I  L NL  L++  N++  LP ++ +L+ L TL L H
Sbjct: 114 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 173

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N    + KEIG    L +L L HN+L  +P  +G L NL  L L +N+L  +P+ + +  
Sbjct: 174 NQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQ 233

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L   ++    L++LP  +   L ++  + L++NK T  P                    
Sbjct: 234 NLQILHLRNNQLTTLPKEI-GQLQNLQKLLLNKNKLTTLPEE------------------ 274

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
                    + +NL K+ + +N LT+LP ++G    L EL+L  NQ+  L E+I  L  L
Sbjct: 275 -------IGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRL 327

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L L NN L  LP+ +  L+ L+ LDLE N+L +LP EIG L++LQ L L+ NQL +LP
Sbjct: 328 QTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLP 387

Query: 489 RAIGHLTNLSYLSVGENNLQS 509
             I  L NL  L +  N L S
Sbjct: 388 EEIKQLKNLKKLYLHNNPLPS 408



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 208/397 (52%), Gaps = 49/397 (12%)

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           A+    ++ + L N Q +R+L+L  +KL  LP  + KL +L++L L  N++  +  +I  
Sbjct: 34  AQTYYRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGK 93

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL  L +  N++  LP E+G+L+NL  L L  N L  +PKEIG    L  L+L HN+L
Sbjct: 94  LQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQL 153

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+ +  L  L  L L +N+  S+ + + +  +L    ++   L+ LP  +       
Sbjct: 154 ATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI------- 206

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                              Q  ++ S+  +HNQ++ +P  I  + +NL  +++++N LT+
Sbjct: 207 ------------------GQLRNLESLGLDHNQLNVLPKEI-GQLQNLQILHLRNNQLTT 247

Query: 395 LPLDLGTW-------------------VG----LTELNLGTNQISKLSEDIQNLVNLEVL 431
           LP ++G                     +G    L +L L  NQ++ L ++I  L NL+ L
Sbjct: 248 LPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQEL 307

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  LP +IG L++L+ L L  N+L  LPN++  L+ L+ L L+ NQL +LP+ I
Sbjct: 308 DLDGNQLITLPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEI 367

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G L  L  L++  N L ++PEEI  L+NL  LYL++N
Sbjct: 368 GKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 124/346 (35%), Positives = 191/346 (55%), Gaps = 27/346 (7%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
            N+ +L++  +K+  LP E+G+L+NL  L+L  N L  LPKEIG    L  L L  N+L+
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            +P+ +G L NL +L+L  N+L ++P+ + +  +L E N+    L++LP+ +        
Sbjct: 109 ALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDI-------- 160

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
                             Q   + ++   HNQ + I   I  + +NL  + +  N L  L
Sbjct: 161 -----------------EQLQRLQTLYLGHNQFNSILKEI-GQLQNLESLGLDHNQLNVL 202

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L  L L  NQ++ L ++I  L NL++L L NN L  LP  IG L+ L+ L 
Sbjct: 203 PKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLL 262

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L +NKL +LP EIG L+ LQ+L L  NQL +LP+ IG L NL  L +  N L ++PE IG
Sbjct: 263 LNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIG 322

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L+ L TLYL +N  LN +P ++    NL+ + L++  L+ +P EI
Sbjct: 323 QLQRLQTLYLGNNQ-LNFLPNKVEQLQNLESLDLEHNQLNALPKEI 367



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 147/309 (47%), Gaps = 50/309 (16%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           NI ++L N  N+  L LS ++L ++P  + K  +L   N++   L +LP  +   L ++ 
Sbjct: 40  NITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEI-GKLQNLQ 98

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + LS+N+  A P                             + +NL K+ + +N LT++
Sbjct: 99  QLHLSKNQLMALPEE-------------------------IGQLQNLQKLKLYENQLTAI 133

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L ELNL  NQ++ L EDI+ L  L+ L L +N    +   IG L+ L+ L 
Sbjct: 134 PKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLG 193

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L+ N+L  LP EIG L+ L+ L L  NQL  LP+ IG L NL  L +  N L ++P+EIG
Sbjct: 194 LDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIG 253

Query: 516 -----------------------TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                                   L+NL  L L +N  L  +P E+    NLQ + LD  
Sbjct: 254 QLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGN 312

Query: 553 PLSQIPSEI 561
            L  +P  I
Sbjct: 313 QLITLPENI 321


>gi|410971089|ref|XP_003992006.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Felis catus]
          Length = 559

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 225/446 (50%), Gaps = 39/446 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL- 159
           E +  + L  + I  +P  ++ L ++  LYL  NKL  L  ++G +++L  L L++N L 
Sbjct: 48  EELEEVHLENNQIEEIPRGIQHLKNVRILYLNKNKLRKLCPELGTLSSLEGLDLSDNPLL 107

Query: 160 -TSLPDSLANLQQLRVLDLRH------------------------NKLNELPMVVYKLTS 194
            ++LP  L  L+ LR L L H                        N L  LP  V   T 
Sbjct: 108 SSALP-VLRGLRGLRELRLYHTDLAEIPVDLCKLLHHLELLGLDGNHLKSLPKEVVNHTK 166

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L+ +YL+ N+ +   P++  LSNL ++ + DNK+  +PPE+G L  L    +A N+L  L
Sbjct: 167 LREIYLKQNQFEVFPPELCALSNLEIVDLDDNKLTAIPPEIGNLTRLQKFYVARNNLLLL 226

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P+ +  C+ L  LDL HN L ++P  L  L  +T + LS N LE VP  + K   L+   
Sbjct: 227 PESLCQCSKLSVLDLSHNRLHSLPHSLAELSGMTEIGLSGNHLEKVPRLICKWTSLHLLY 286

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN---FEHNQIDKI 371
           +    L +L       L ++  + LS+N    +    P Q  ++ ++     + N+I ++
Sbjct: 287 LRDTGLRALRRS-FRRLVNLRFLDLSQNHLERF----PLQICALRNLEILALDDNKICQL 341

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS---EDIQNLVNL 428
           P    S +K L  + +  N L S P ++ +   L +L +G +Q +KL+   EDI  L NL
Sbjct: 342 PPDFVSLSK-LKMLGLTGNQLASFPEEILSLQSLEKLYIGQDQGAKLTYMPEDISKLQNL 400

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L + NN L+ LP+S+G++  L+ L+   N L+ LP+ I   + L+ L+L+ N +  LP
Sbjct: 401 KELYIENNHLEYLPTSLGSMPNLEILNCCHNLLKQLPDSICQAQALKELLLEDNLITCLP 460

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEI 514
             +  L NL  L++  N ++  P E+
Sbjct: 461 ENLDSLMNLKVLTLMSNPMEDPPGEV 486



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 223/478 (46%), Gaps = 59/478 (12%)

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L ++P  +   ++L  + L +N++ E+P  +  L +++ILYL  N+++ + P++  LS+
Sbjct: 36  GLPTIPPEIFGFEELEEVHLENNQIEEIPRGIQHLKNVRILYLNKNKLRKLCPELGTLSS 95

Query: 218 LSMLSMRDNK-IRELPPELGELKNLVTLDLAH------------------------NHLE 252
           L  L + DN  +    P L  L+ L  L L H                        NHL+
Sbjct: 96  LEGLDLSDNPLLSSALPVLRGLRGLRELRLYHTDLAEIPVDLCKLLHHLELLGLDGNHLK 155

Query: 253 ELPKEIGN---------------------CTM--LVTLDLQHNELVNIPDMLGNLINLTR 289
            LPKE+ N                     C +  L  +DL  N+L  IP  +GNL  L +
Sbjct: 156 SLPKEVVNHTKLREIYLKQNQFEVFPPELCALSNLEIVDLDDNKLTAIPPEIGNLTRLQK 215

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS 349
             ++ N L  +PE+L +C  L+  ++    L SLP   L+ L+ +  I LS N     P 
Sbjct: 216 FYVARNNLLLLPESLCQCSKLSVLDLSHNRLHSLPHS-LAELSGMTEIGLSGNHLEKVPR 274

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
               ++TS++ +      +  +    F R  NL  +++  N L   PL +     L  L 
Sbjct: 275 -LICKWTSLHLLYLRDTGLRALRRS-FRRLVNLRFLDLSQNHLERFPLQICALRNLEILA 332

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN---KLESLPN 466
           L  N+I +L  D  +L  L++L L+ N L   P  I +L+ L+ L + ++   KL  +P 
Sbjct: 333 LDDNKICQLPPDFVSLSKLKMLGLTGNQLASFPEEILSLQSLEKLYIGQDQGAKLTYMPE 392

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
           +I  L+ L+ L +++N L  LP ++G + NL  L+   N L+ +P+ I   + L  L L 
Sbjct: 393 DISKLQNLKELYIENNHLEYLPTSLGSMPNLEILNCCHNLLKQLPDSICQAQALKELLLE 452

Query: 527 DN--TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           DN  TCL   P  L    NL++++L + P+   P E+   G   I  YLK +   + M
Sbjct: 453 DNLITCL---PENLDSLMNLKVLTLMSNPMEDPPGEVCAEGNQAIWTYLKTKRNMKIM 507



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 196/395 (49%), Gaps = 13/395 (3%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
            +D  +  L  +P  ++    L+ ++L  N+I+ +   IQ+L N+ +L +  NK+R+L P
Sbjct: 29  FIDASNQGLPTIPPEIFGFEELEEVHLENNQIEEIPRGIQHLKNVRILYLNKNKLRKLCP 88

Query: 234 ELGELKNLVTLDLAHNHL--EELPKEIGNCTMLVTLDLQHNELVNIP-DMLGNLINLTRL 290
           ELG L +L  LDL+ N L    LP   G    L  L L H +L  IP D+   L +L  L
Sbjct: 89  ELGTLSSLEGLDLSDNPLLSSALPVLRG-LRGLRELRLYHTDLAEIPVDLCKLLHHLELL 147

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS- 349
            L  N L+S+P+ +     L E  ++       P  L  +L+++  + L  NK TA P  
Sbjct: 148 GLDGNHLKSLPKEVVNHTKLREIYLKQNQFEVFPPEL-CALSNLEIVDLDDNKLTAIPPE 206

Query: 350 -GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
            G  T+    Y      N +  +P  +   +K LS +++  N L SLP  L    G+TE+
Sbjct: 207 IGNLTRLQKFY---VARNNLLLLPESLCQCSK-LSVLDLSHNRLHSLPHSLAELSGMTEI 262

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
            L  N + K+   I    +L +L L +  L+ L  S   L  L+ LDL +N LE  P +I
Sbjct: 263 GLSGNHLEKVPRLICKWTSLHLLYLRDTGLRALRRSFRRLVNLRFLDLSQNHLERFPLQI 322

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
             L+ L+ L L  N++  LP     L+ L  L +  N L S PEEI +L++L  LY+  +
Sbjct: 323 CALRNLEILALDDNKICQLPPDFVSLSKLKMLGLTGNQLASFPEEILSLQSLEKLYIGQD 382

Query: 529 TC--LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
               L  +P +++   NL+ + ++N  L  +P+ +
Sbjct: 383 QGAKLTYMPEDISKLQNLKELYIENNHLEYLPTSL 417



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 162/319 (50%), Gaps = 29/319 (9%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+  +DL  + +T +PP +  LT L++ Y+  N L  LP  +   + L+ L L+ N
Sbjct: 185 CALSNLEIVDLDDNKLTAIPPEIGNLTRLQKFYVARNNLLLLPESLCQCSKLSVLDLSHN 244

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L SLP SLA L  +  + L  N L ++P ++ K TSL +LYLR   ++ +    + L N
Sbjct: 245 RLHSLPHSLAELSGMTEIGLSGNHLEKVPRLICKWTSLHLLYLRDTGLRALRRSFRRLVN 304

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N +   P ++  L+NL  L L  N + +LP +  + + L  L L  N+L + 
Sbjct: 305 LRFLDLSQNHLERFPLQICALRNLEILALDDNKICQLPPDFVSLSKLKMLGLTGNQLASF 364

Query: 278 PDMLGNLINLTRLRLSYN---RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           P+ + +L +L +L +  +   +L  +PE +SK  +L E  +E   L  LP    +SL S+
Sbjct: 365 PEEILSLQSLEKLYIGQDQGAKLTYMPEDISKLQNLKELYIENNHLEYLP----TSLGSM 420

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            N+ +                     +N  HN + ++P  I  +A+ L ++ ++DNL+T 
Sbjct: 421 PNLEI---------------------LNCCHNLLKQLPDSI-CQAQALKELLLEDNLITC 458

Query: 395 LPLDLGTWVGLTELNLGTN 413
           LP +L + + L  L L +N
Sbjct: 459 LPENLDSLMNLKVLTLMSN 477



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 104/209 (49%), Gaps = 3/209 (1%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLA 155
           L CK  ++  L L  + +  L  S  +L +L  L L  N L   P QI  + NL  L L 
Sbjct: 275 LICKWTSLHLLYLRDTGLRALRRSFRRLVNLRFLDLSQNHLERFPLQICALRNLEILALD 334

Query: 156 ENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL---RFNRIKTVHPDI 212
           +N +  LP    +L +L++L L  N+L   P  +  L SL+ LY+   +  ++  +  DI
Sbjct: 335 DNKICQLPPDFVSLSKLKMLGLTGNQLASFPEEILSLQSLEKLYIGQDQGAKLTYMPEDI 394

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L NL  L + +N +  LP  LG + NL  L+  HN L++LP  I     L  L L+ N
Sbjct: 395 SKLQNLKELYIENNHLEYLPTSLGSMPNLEILNCCHNLLKQLPDSICQAQALKELLLEDN 454

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVP 301
            +  +P+ L +L+NL  L L  N +E  P
Sbjct: 455 LITCLPENLDSLMNLKVLTLMSNPMEDPP 483



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 147/342 (42%), Gaps = 48/342 (14%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESV-PE 302
           +D ++  L  +P EI     L  + L++N++  IP  + +L N+  L L+ N+L  + PE
Sbjct: 30  IDASNQGLPTIPPEIFGFEELEEVHLENNQIEEIPRGIQHLKNVRILYLNKNKLRKLCPE 89

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
                                    L +L+S+  + LS N   +           +  + 
Sbjct: 90  -------------------------LGTLSSLEGLDLSDNPLLSSALPVLRGLRGLRELR 124

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             H  + +IP  +     +L  + +  N L SLP ++     L E+ L  NQ      ++
Sbjct: 125 LYHTDLAEIPVDLCKLLHHLELLGLDGNHLKSLPKEVVNHTKLREIYLKQNQFEVFPPEL 184

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NLE++ L +N L  +P  IGNL +L+   +  N L  LP  +    +L  L L  N
Sbjct: 185 CALSNLEIVDLDDNKLTAIPPEIGNLTRLQKFYVARNNLLLLPESLCQCSKLSVLDLSHN 244

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC------------ 530
           +L SLP ++  L+ ++ + +  N+L+ +P  I    +LH LYL D               
Sbjct: 245 RLHSLPHSLAELSGMTEIGLSGNHLEKVPRLICKWTSLHLLYLRDTGLRALRRSFRRLVN 304

Query: 531 ----------LNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
                     L   P ++    NL+I++LD+  + Q+P + V
Sbjct: 305 LRFLDLSQNHLERFPLQICALRNLEILALDDNKICQLPPDFV 346


>gi|418668202|ref|ZP_13229605.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756059|gb|EKR17686.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 378

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/313 (35%), Positives = 178/313 (56%), Gaps = 5/313 (1%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L + + K++ LP ++G+LKNL  LDL+ N L  LPKEI     L  L L +N+L  
Sbjct: 48  DVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTT 107

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
            P  +  L +L +L LS N+L  +P  + +  +L E N+    L ++   +   L ++  
Sbjct: 108 FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEI-EQLKNLQK 166

Query: 337 ITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
           + L  N+ TA+P   G  Q  ++ S+   +NQ+   P  I  + +NL ++ + +N LT+ 
Sbjct: 167 LYLDNNQLTAFPKEIGKLQ--NLKSLFLSNNQLTTFPKEI-GKLQNLQELYLSNNQLTTF 223

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L  L LG NQ++ +  +I  L  L+ L L  N L  +P  IG L+ L+ L 
Sbjct: 224 PKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLF 283

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L  N+ +++P E G LK L+ L L +NQL +LP+ IG L NL  L++  N L +IP+EIG
Sbjct: 284 LSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIG 343

Query: 516 TLENLHTLYLNDN 528
            L+NL TLYL +N
Sbjct: 344 QLQNLQTLYLRNN 356



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/322 (35%), Positives = 178/322 (55%), Gaps = 8/322 (2%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
            +++L L   ++K +   I  L NL ML + DN++  LP E+ +LKNL  L L +N L  
Sbjct: 48  DVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTT 107

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
            PKEI     L  L L +N+L  +P  +G L NL  L L  N+L+++ + + +  +L + 
Sbjct: 108 FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKL 167

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKI 371
            ++   L++ P  +   L ++ ++ LS N+ T +P   G       +Y     +NQ+   
Sbjct: 168 YLDNNQLTAFPKEI-GKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELY---LSNNQLTTF 223

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + + L  + + DN LT++P ++G    L ELNL  NQ++ + ++I  L NL+VL
Sbjct: 224 PKEI-GKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVL 282

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            LS N  K +P   G L+ LK L L+ N+L +LP EIG LK L+ L L +NQL ++P+ I
Sbjct: 283 FLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEI 342

Query: 492 GHLTNLSYLSVGENNLQSIPEE 513
           G L NL  L +  N L SI E+
Sbjct: 343 GQLQNLQTLYLRNNQL-SIEEK 363



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/319 (35%), Positives = 171/319 (53%), Gaps = 27/319 (8%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            L L+   L+ LP++IG    L  LDL  N+L+ +P  +  L NL  L L+YN+L + P+
Sbjct: 51  VLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPK 110

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + +                        L S++ + LS N+ T  P     Q  ++  +N
Sbjct: 111 EIEQ------------------------LKSLHKLYLSNNQLTILPVE-IGQLQNLQELN 145

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQ+  I   I  + KNL K+ + +N LT+ P ++G    L  L L  NQ++   ++I
Sbjct: 146 LWNNQLKTISKEI-EQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEI 204

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NL+ L LSNN L   P  IG L+KL+ L L +N+L ++PNEIG L++LQ L L  N
Sbjct: 205 GKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVN 264

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL ++P+ IG L NL  L +  N  ++IP E G L+NL  L L+ N  L  +P E+    
Sbjct: 265 QLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQ-LTALPKEIGKLK 323

Query: 543 NLQIMSLDNCPLSQIPSEI 561
           NL++++LD   L+ IP EI
Sbjct: 324 NLKMLNLDANQLTTIPKEI 342



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 114/176 (64%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+ +L LS + +T  P  + KL +L+ELYL  N+L + P +IG +  L  LGL +N 
Sbjct: 183 KLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQ 242

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT++P+ +  LQ+L+ L+L  N+L  +P  + +L +L++L+L +N+ KT+  +   L NL
Sbjct: 243 LTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNL 302

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
            MLS+  N++  LP E+G+LKNL  L+L  N L  +PKEIG    L TL L++N+L
Sbjct: 303 KMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQL 358



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 134/249 (53%), Gaps = 1/249 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L+ + +T  P  +E+L  L +LYL  N+L  LP +IG + NL  L L  N L 
Sbjct: 93  KNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLK 152

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++   +  L+ L+ L L +N+L   P  + KL +LK L+L  N++ T   +I  L NL  
Sbjct: 153 TISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQE 212

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++   P E+G+L+ L  L L  N L  +P EIG    L  L+L  N+L  IP  
Sbjct: 213 LYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKE 272

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LSYN+ +++P    +  +L   +++   L++LP   +  L ++  + L 
Sbjct: 273 IGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE-IGKLKNLKMLNLD 331

Query: 341 RNKFTAYPS 349
            N+ T  P 
Sbjct: 332 ANQLTTIPK 340



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 122/221 (55%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + +  +   +E+L +L++LYL  N+L + P +IG + NL  L L+ N LT
Sbjct: 139 QNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLT 198

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           + P  +  LQ L+ L L +N+L   P  + KL  L+ L L  N++ T+  +I  L  L  
Sbjct: 199 TFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQE 258

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  N++  +P E+G+L+NL  L L++N  + +P E G    L  L L  N+L  +P  
Sbjct: 259 LNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE 318

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
           +G L NL  L L  N+L ++P+ + +  +L    +    LS
Sbjct: 319 IGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQLS 359



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 83/144 (57%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L++  QN +++ VL+LS   LK LP  IG L+ L+ LDL +N+L  LP EI  LK LQ L
Sbjct: 39  LTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 98

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L  NQL + P+ I  L +L  L +  N L  +P EIG L+NL  L L +N  L  I  E
Sbjct: 99  FLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQ-LKTISKE 157

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    NLQ + LDN  L+  P EI
Sbjct: 158 IEQLKNLQKLYLDNNQLTAFPKEI 181



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 70/123 (56%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  +  N   ++ L L E KL+ LP +IG LK LQ L L  NQL+ LP+ I  L NL 
Sbjct: 37  RDLTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQ 96

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N L + P+EI  L++LH LYL++N  L  +P E+    NLQ ++L N  L  I 
Sbjct: 97  ELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQ-LTILPVEIGQLQNLQELNLWNNQLKTIS 155

Query: 559 SEI 561
            EI
Sbjct: 156 KEI 158


>gi|421110784|ref|ZP_15571275.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803881|gb|EKS10008.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 371

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/321 (36%), Positives = 180/321 (56%), Gaps = 3/321 (0%)

Query: 207 TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
           T++  +Q  + + +L +   K+  LP E+G L++L  LDL+ N +  LP+EIGN   L  
Sbjct: 28  TLNEALQNPTQVRVLHLNAKKLTALPKEIGNLQHLQKLDLSFNTITVLPQEIGNLQSLQD 87

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           L+L  NEL  +P  +G L +L RL L  N+L ++P+ + K   L E  +    L+++P  
Sbjct: 88  LNLWENELTTLPKEIGKLQSLQRLTLWENQLTTLPKEIGKLQSLQELILGKNQLTTIPKE 147

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
               L  +  ++LS N+ TA P     Q  ++  ++  +NQ+  +P  I    ++L K+ 
Sbjct: 148 FWQ-LQYLQRLSLSFNQLTAIPKEI-EQLQNLQEMDSNNNQLKTLPKEI-GNLQHLQKLY 204

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           +  N +T LP ++G    L +L L +N+I+ L ++I NL  LE L L  N L  LP  IG
Sbjct: 205 LSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNQLTTLPKEIG 264

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            LR LK L L+ N L ++P EIG L+ LQ L L  N+L +LP+ I +L +L  L +  N 
Sbjct: 265 QLRNLKVLYLDHNNLANIPKEIGKLQNLQTLSLDRNKLTTLPKEIENLQSLESLDLSNNP 324

Query: 507 LQSIPEEIGTLENLHTLYLND 527
           L S PEEIG L++L  L L +
Sbjct: 325 LTSFPEEIGKLQHLKWLRLEN 345



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/334 (34%), Positives = 175/334 (52%), Gaps = 30/334 (8%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            L L    L  LPKEIGN   L  LDL  N +  +P  +GNL +L  L L  N L ++P+
Sbjct: 41  VLHLNAKKLTALPKEIGNLQHLQKLDLSFNTITVLPQEIGNLQSLQDLNLWENELTTLPK 100

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + K   L    +    L++LP  +   L S+  + L +N+ T  P              
Sbjct: 101 EIGKLQSLQRLTLWENQLTTLPKEI-GKLQSLQELILGKNQLTTIPKE------------ 147

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
                        F + + L ++++  N LT++P ++     L E++   NQ+  L ++I
Sbjct: 148 -------------FWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEI 194

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            NL +L+ L LS+N +  LP  IGNL+ L+ L L  NK+  LP EIG L++L+ L L+ N
Sbjct: 195 GNLQHLQKLYLSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVN 254

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL +LP+ IG L NL  L +  NNL +IP+EIG L+NL TL L+ N  L  +P E+    
Sbjct: 255 QLTTLPKEIGQLRNLKVLYLDHNNLANIPKEIGKLQNLQTLSLDRNK-LTTLPKEIENLQ 313

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
           +L+ + L N PL+  P EI   G    +++L+++
Sbjct: 314 SLESLDLSNNPLTSFPEEI---GKLQHLKWLRLE 344



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/342 (34%), Positives = 174/342 (50%), Gaps = 26/342 (7%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +L ++L N  Q+RVL L   KL  LP  +  L  L+ L L FN I  +  +I  L +L  
Sbjct: 28  TLNEALQNPTQVRVLHLNAKKLTALPKEIGNLQHLQKLDLSFNTITVLPQEIGNLQSLQD 87

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++ +N++  LP E+G+L++L  L L  N L  LPKEIG    L  L L  N+L  IP  
Sbjct: 88  LNLWENELTTLPKEIGKLQSLQRLTLWENQLTTLPKEIGKLQSLQELILGKNQLTTIPKE 147

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
              L  L RL LS+N+L ++P+ + +  +L E +     L +LP   + +L  +  + LS
Sbjct: 148 FWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKE-IGNLQHLQKLYLS 206

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            NK T  P                               ++L K+ +  N +T LP ++G
Sbjct: 207 SNKITILPKE-------------------------IGNLQHLQKLYLSSNKITILPKEIG 241

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L L  NQ++ L ++I  L NL+VL L +N L  +P  IG L+ L+ L L+ NK
Sbjct: 242 NLQKLEYLYLEVNQLTTLPKEIGQLRNLKVLYLDHNNLANIPKEIGKLQNLQTLSLDRNK 301

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
           L +LP EI  L+ L+ L L +N L S P  IG L +L +L +
Sbjct: 302 LTTLPKEIENLQSLESLDLSNNPLTSFPEEIGKLQHLKWLRL 343



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/284 (35%), Positives = 160/284 (56%), Gaps = 6/284 (2%)

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           + L N   +  L L+  +L ++P+ +    HL + ++    ++ LP   + +L S+ ++ 
Sbjct: 31  EALQNPTQVRVLHLNAKKLTALPKEIGNLQHLQKLDLSFNTITVLPQE-IGNLQSLQDLN 89

Query: 339 LSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
           L  N+ T  P   G  Q  S+  +    NQ+  +P  I  + ++L ++ +  N LT++P 
Sbjct: 90  LWENELTTLPKEIGKLQ--SLQRLTLWENQLTTLPKEI-GKLQSLQELILGKNQLTTIPK 146

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           +      L  L+L  NQ++ + ++I+ L NL+ +  +NN LK LP  IGNL+ L+ L L 
Sbjct: 147 EFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLS 206

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
            NK+  LP EIG L+ LQ+L L SN++  LP+ IG+L  L YL +  N L ++P+EIG L
Sbjct: 207 SNKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNQLTTLPKEIGQL 266

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            NL  LYL+ N  L NIP E+    NLQ +SLD   L+ +P EI
Sbjct: 267 RNLKVLYLDHNN-LANIPKEIGKLQNLQTLSLDRNKLTTLPKEI 309



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 173/352 (49%), Gaps = 49/352 (13%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L+   +T LP  +  L HL++L L  N +  LP +IG + +L  L L EN LT+LP  
Sbjct: 42  LHLNAKKLTALPKEIGNLQHLQKLDLSFNTITVLPQEIGNLQSLQDLNLWENELTTLPKE 101

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ L L  N+L  LP  + KL SL+ L L  N++ T+  +   L  L  LS+  
Sbjct: 102 IGKLQSLQRLTLWENQLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSF 161

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  +P E+ +L+NL  +D  +N L+ LPKEIGN   L  L L  N++  +P  +GNL 
Sbjct: 162 NQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKEIGNLQ 221

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L +L LS N++  +P+ +     L    +E   L++LP  +                  
Sbjct: 222 HLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNQLTTLPKEI------------------ 263

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                   Q  ++  +  +HN +  IP  I  + +NL  +++  N LT+LP         
Sbjct: 264 -------GQLRNLKVLYLDHNNLANIPKEI-GKLQNLQTLSLDRNKLTTLP--------- 306

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
                         ++I+NL +LE L LSNN L   P  IG L+ LK L LE
Sbjct: 307 --------------KEIENLQSLESLDLSNNPLTSFPEEIGKLQHLKWLRLE 344



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 122/227 (53%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +++  L L ++ +T LP  + KL  L+EL L  N+L ++P +   +  L  L L+ N 
Sbjct: 104 KLQSLQRLTLWENQLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQ 163

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT++P  +  LQ L+ +D  +N+L  LP  +  L  L+ LYL  N+I  +  +I  L +L
Sbjct: 164 LTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKEIGNLQHL 223

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L +  NKI  LP E+G L+ L  L L  N L  LPKEIG    L  L L HN L NIP
Sbjct: 224 QKLYLSSNKITILPKEIGNLQKLEYLYLEVNQLTTLPKEIGQLRNLKVLYLDHNNLANIP 283

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
             +G L NL  L L  N+L ++P+ +     L   ++    L+S P+
Sbjct: 284 KEIGKLQNLQTLSLDRNKLTTLPKEIENLQSLESLDLSNNPLTSFPE 330



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 115/213 (53%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L K+ +T +P    +L +L+ L L  N+L ++P +I  + NL  +    N L +LP  
Sbjct: 134 LILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKE 193

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + NLQ L+ L L  NK+  LP  +  L  L+ LYL  N+I  +  +I  L  L  L +  
Sbjct: 194 IGNLQHLQKLYLSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEV 253

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L+NL  L L HN+L  +PKEIG    L TL L  N+L  +P  + NL 
Sbjct: 254 NQLTTLPKEIGQLRNLKVLYLDHNNLANIPKEIGKLQNLQTLSLDRNKLTTLPKEIENLQ 313

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
           +L  L LS N L S PE + K  HL    +E  
Sbjct: 314 SLESLDLSNNPLTSFPEEIGKLQHLKWLRLENI 346



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 84/144 (58%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L+E +QN   + VL L+   L  LP  IGNL+ L+ LDL  N +  LP EIG L+ LQ L
Sbjct: 29  LNEALQNPTQVRVLHLNAKKLTALPKEIGNLQHLQKLDLSFNTITVLPQEIGNLQSLQDL 88

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L  N+L +LP+ IG L +L  L++ EN L ++P+EIG L++L  L L  N  L  IP E
Sbjct: 89  NLWENELTTLPKEIGKLQSLQRLTLWENQLTTLPKEIGKLQSLQELILGKNQ-LTTIPKE 147

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
                 LQ +SL    L+ IP EI
Sbjct: 148 FWQLQYLQRLSLSFNQLTAIPKEI 171


>gi|405972453|gb|EKC37220.1| Leucine-rich repeat-containing protein 7 [Crassostrea gigas]
          Length = 1283

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/391 (32%), Positives = 203/391 (51%), Gaps = 12/391 (3%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +++  LD RH  L ++P  V+    +L+ LYL  N+I+ +  ++     +  L + +N++
Sbjct: 17  EEIYELDYRHCNLTDVPAQVFNFERTLEELYLDNNQIQDLPRELFCCHGIRKLCLSNNEV 76

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             +PP +G L NL  LD++ N + ++P+ I  C  L +++   N L  +P+ L  L NLT
Sbjct: 77  TNIPPAIGSLINLEELDVSKNGIIDIPENINCCKCLRSVNANVNPLGKLPEGLTQLGNLT 136

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
           +L L+   L+ +P T  + + L    +    L +LP    S LT++  + +  N+FT  P
Sbjct: 137 QLYLNDTFLDYLPGTFGRLLKLKVLEIRENHLKTLPKSF-SMLTALERLDIGHNEFTELP 195

Query: 349 S--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
              G     TS+  +  +HNQI  I   I    K L  ++   N L SLP ++     L 
Sbjct: 196 DVIG---NLTSLLELWCDHNQISTITPTI-GNLKRLMFLDASSNHLQSLPSEIEGCTSLG 251

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
           +L+L TN+I  L E + NL +L  L   NN L  LPS+IG L+ L  L++  N LE LP 
Sbjct: 252 DLHLTTNRIQALPETLGNLESLTTLKADNNQLTSLPSTIGGLQSLSELNVSCNNLEDLPV 311

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            +G L+ L+      N L+ +P  +G    ++ LS+  N L+ IP+EIG +  L  L L+
Sbjct: 312 TLGLLRNLRTFYADENYLLFIPAELGSCNGITVLSLRSNRLEYIPDEIGRIPRLRVLNLS 371

Query: 527 DNTCLNNIPFELALCSNLQIMSL---DNCPL 554
           DN  L  +PF +    +LQ + L     CPL
Sbjct: 372 DNR-LRYLPFTITKLKDLQALWLAENQTCPL 401



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 115/325 (35%), Positives = 169/325 (52%), Gaps = 8/325 (2%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           + L  L L +N +++LP+E+  C  +  L L +NE+ NIP  +G+LINL  L +S N + 
Sbjct: 41  RTLEELYLDNNQIQDLPRELFCCHGIRKLCLSNNEVTNIPPAIGSLINLEELDVSKNGII 100

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT--LSRNKFTAYPSGGPTQFT 356
            +PE ++ C  L   N     L  LP+GL    T + N+T     + F  Y  G   +  
Sbjct: 101 DIPENINCCKCLRSVNANVNPLGKLPEGL----TQLGNLTQLYLNDTFLDYLPGTFGRLL 156

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS 416
            +  +    N +  +P   FS    L ++++  N  T LP  +G    L EL    NQIS
Sbjct: 157 KLKVLEIRENHLKTLPKS-FSMLTALERLDIGHNEFTELPDVIGNLTSLLELWCDHNQIS 215

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
            ++  I NL  L  L  S+N L+ LPS I     L  L L  N++++LP  +G L+ L  
Sbjct: 216 TITPTIGNLKRLMFLDASSNHLQSLPSEIEGCTSLGDLHLTTNRIQALPETLGNLESLTT 275

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
           L   +NQL SLP  IG L +LS L+V  NNL+ +P  +G L NL T Y ++N  L  IP 
Sbjct: 276 LKADNNQLTSLPSTIGGLQSLSELNVSCNNLEDLPVTLGLLRNLRTFYADENYLL-FIPA 334

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEI 561
           EL  C+ + ++SL +  L  IP EI
Sbjct: 335 ELGSCNGITVLSLRSNRLEYIPDEI 359



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 192/392 (48%), Gaps = 32/392 (8%)

Query: 96  LRCK-EENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQ----------- 142
           LR K +E I  LD    ++T +P  V      LEELYL  N++  LP +           
Sbjct: 11  LRPKIQEEIYELDYRHCNLTDVPAQVFNFERTLEELYLDNNQIQDLPRELFCCHGIRKLC 70

Query: 143 ------------IGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVY 190
                       IG + NL  L +++N +  +P+++   + LR ++   N L +LP  + 
Sbjct: 71  LSNNEVTNIPPAIGSLINLEELDVSKNGIIDIPENINCCKCLRSVNANVNPLGKLPEGLT 130

Query: 191 KLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
           +L +L  LYL    +  +      L  L +L +R+N ++ LP     L  L  LD+ HN 
Sbjct: 131 QLGNLTQLYLNDTFLDYLPGTFGRLLKLKVLEIRENHLKTLPKSFSMLTALERLDIGHNE 190

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
             ELP  IGN T L+ L   HN++  I   +GNL  L  L  S N L+S+P  +  C  L
Sbjct: 191 FTELPDVIGNLTSLLELWCDHNQISTITPTIGNLKRLMFLDASSNHLQSLPSEIEGCTSL 250

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQI 368
            + ++    + +LP+  L +L S+  +    N+ T+ PS  GG     S+  +N   N +
Sbjct: 251 GDLHLTTNRIQALPE-TLGNLESLTTLKADNNQLTSLPSTIGG---LQSLSELNVSCNNL 306

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
           + +P       +NL      +N L  +P +LG+  G+T L+L +N++  + ++I  +  L
Sbjct: 307 EDLPV-TLGLLRNLRTFYADENYLLFIPAELGSCNGITVLSLRSNRLEYIPDEIGRIPRL 365

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
            VL LS+N L+ LP +I  L+ L+ L L EN+
Sbjct: 366 RVLNLSDNRLRYLPFTITKLKDLQALWLAENQ 397



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 66/133 (49%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E++  L    + +T LP ++  L  L EL +  N L  LP  +G + NL      EN L 
Sbjct: 271 ESLTTLKADNNQLTSLPSTIGGLQSLSELNVSCNNLEDLPVTLGLLRNLRTFYADENYLL 330

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            +P  L +   + VL LR N+L  +P  + ++  L++L L  NR++ +   I  L +L  
Sbjct: 331 FIPAELGSCNGITVLSLRSNRLEYIPDEIGRIPRLRVLNLSDNRLRYLPFTITKLKDLQA 390

Query: 221 LSMRDNKIRELPP 233
           L + +N+   L P
Sbjct: 391 LWLAENQTCPLIP 403


>gi|326668654|ref|XP_001920812.3| PREDICTED: leucine-rich repeat-containing protein 7-like [Danio
           rerio]
          Length = 1473

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 208/464 (44%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  +      LEELYL  N++  LP Q+     L  L +
Sbjct: 17  FRGEEEVISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSM 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L++LP ++A+L  L+ LD+  N + E P  +     L ++    N I  +      
Sbjct: 77  PDNDLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKCLSVVEASVNPIAKLPEGFTQ 136

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ +PK I   + L  LDL  NE 
Sbjct: 137 LLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLSQLERLDLGSNEF 196

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + +L  L L  N L+++P ++ K   L   ++    + SL D  +S   S+
Sbjct: 197 SELPEVLEQIHSLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIESL-DADISGCESL 255

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS                                                 N+L  
Sbjct: 256 EDLLLSA------------------------------------------------NMLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    LT L +  NQ++ L   I +L  LE    S N L+ LP +IG L  L+  
Sbjct: 268 LPDSIGKLKKLTTLKVDDNQLTSLPNTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             +EN L  LP EIG  + +  + L+SN+L  LP  IG +T L  L++ +N L+++P   
Sbjct: 328 AADENFLSDLPREIGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L++L  L+L+DN     IP +       +   L N    Q P
Sbjct: 388 TKLKDLAALWLSDNQSKALIPLQTEAHPETKQRVLTNYMFPQQP 431



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 181/368 (49%), Gaps = 51/368 (13%)

Query: 218 LSMLSMRDNKIRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           +S+L      ++++P E+    + L  L L  N +EELPK++ NC  L  L +  N+L N
Sbjct: 24  ISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSN 83

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  + +L+NL  L +S N ++  P+ +  C  L+        ++ LP+G          
Sbjct: 84  LPTTIASLVNLKELDISKNGIQEFPDNIKCCKCLSVVEASVNPIAKLPEGF--------- 134

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
                           TQ  ++  +      ++ +P   F R   L  + +++N L ++P
Sbjct: 135 ----------------TQLLNLTQLFLNDAFLEYLPAN-FGRLSKLRILELRENHLKTMP 177

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +     L  L+LG+N+ S+L E ++ + +L+ L L NN L+ +P SIG LR+L+ LDL
Sbjct: 178 KSIHRLSQLERLDLGSNEFSELPEVLEQIHSLKELWLDNNSLQTIPGSIGKLRQLRYLDL 237

Query: 457 EENKLESL-----------------------PNEIGFLKELQRLILQSNQLVSLPRAIGH 493
            +N++ESL                       P+ IG LK+L  L +  NQL SLP  IG 
Sbjct: 238 AKNRIESLDADISGCESLEDLLLSANMLQQLPDSIGKLKKLTTLKVDDNQLTSLPNTIGS 297

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L+ L       N L+S+P  IG L +L T   ++N  L+++P E+  C N+ +MSL +  
Sbjct: 298 LSLLEEFDCSCNELESLPPTIGYLHSLRTFAADEN-FLSDLPREIGNCRNVTVMSLRSNK 356

Query: 554 LSQIPSEI 561
           L  +P EI
Sbjct: 357 LEFLPDEI 364


>gi|395843935|ref|XP_003794726.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Otolemur garnettii]
          Length = 635

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 130/430 (30%), Positives = 208/430 (48%), Gaps = 31/430 (7%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS-------------- 158
           I  LPP +  L ++  LYL+ NKL SL  Q+G ++ L  L L+ +S              
Sbjct: 128 IEELPPDIRHLQNIVTLYLHNNKLRSLCPQLGLLSRLQRLDLSHSSIPAAALPVLSRLRA 187

Query: 159 ----------LTSLPDSLA-NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
                     L  LP  +  NL  L +L L  N L  LP  V  LT L+ +YL  N+   
Sbjct: 188 LRELRLYHAGLAELPAVICKNLHHLELLGLTGNHLRLLPKEVVNLTKLREIYLGQNQFNA 247

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
              ++  L  L  + +  N++  +P E+G L  L  L +AHN L  LP+ +G C  +  L
Sbjct: 248 FPAELCVLDQLRTIDLDKNRVAAIPEEVGHLAALHKLYVAHNSLPCLPEALGRCGGMSVL 307

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
           D+ HN L  IP  +  L  +T + LS NRL+ VP  L     L+   +    L  L  G 
Sbjct: 308 DVSHNLLRGIPHGMAELAEMTEVGLSGNRLDKVPHLLCHWSSLHLLYLSDAGLRRL-RGS 366

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
              L ++  + LSRN     P         +  ++ + N+I ++P  + S +K L  + +
Sbjct: 367 FRRLVNLRFLDLSRNLLDHCPRQ-LCALRKLEVLSLDDNRIGQLPSELCSLSK-LKILGL 424

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLS---EDIQNLVNLEVLVLSNNLLKKLPSS 444
             N   S P ++ +   L +L +G +Q SKL+   E+I  L +L+ L + NN L+ LP++
Sbjct: 425 TGNEFVSFPEEVFSLESLEKLYIGQDQGSKLTYVPENIGKLQSLKELYIENNYLETLPAA 484

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
           +G++  L+ LD   N L+ LP+ I   + L+  +L  N L  LP  +  L NL  L++ E
Sbjct: 485 LGSMPHLEVLDCRHNLLKVLPDAICHAQALREFLLDDNLLTHLPEDLDFLVNLKVLTLSE 544

Query: 505 NNLQSIPEEI 514
           N ++  P+++
Sbjct: 545 NPMEEPPKDV 554



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 232/474 (48%), Gaps = 9/474 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD S   +T +PP +  L  LEEL+L  N++  LP  I ++ N+  L L  N L SL   
Sbjct: 98  LDASSQGLTAIPPEILALQELEELHLENNQIEELPPDIRHLQNIVTLYLHNNKLRSLCPQ 157

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI--QYLSNLSMLSM 223
           L  L +L+ LDL H+ +    + V            ++      P +  + L +L +L +
Sbjct: 158 LGLLSRLQRLDLSHSSIPAAALPVLSRLRALRELRLYHAGLAELPAVICKNLHHLELLGL 217

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
             N +R LP E+  L  L  + L  N     P E+     L T+DL  N +  IP+ +G+
Sbjct: 218 TGNHLRLLPKEVVNLTKLREIYLGQNQFNAFPAELCVLDQLRTIDLDKNRVAAIPEEVGH 277

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L  L +L +++N L  +PE L +C  ++  +V    L  +P G ++ L  +  + LS N+
Sbjct: 278 LAALHKLYVAHNSLPCLPEALGRCGGMSVLDVSHNLLRGIPHG-MAELAEMTEVGLSGNR 336

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
               P      ++S++ +      + ++  G F R  NL  +++  NLL   P  L    
Sbjct: 337 LDKVPH-LLCHWSSLHLLYLSDAGLRRL-RGSFRRLVNLRFLDLSRNLLDHCPRQLCALR 394

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN---K 460
            L  L+L  N+I +L  ++ +L  L++L L+ N     P  + +L  L+ L + ++   K
Sbjct: 395 KLEVLSLDDNRIGQLPSELCSLSKLKILGLTGNEFVSFPEEVFSLESLEKLYIGQDQGSK 454

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L  +P  IG L+ L+ L +++N L +LP A+G + +L  L    N L+ +P+ I   + L
Sbjct: 455 LTYVPENIGKLQSLKELYIENNYLETLPAALGSMPHLEVLDCRHNLLKVLPDAICHAQAL 514

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
               L+DN  L ++P +L    NL++++L   P+ + P ++   G   +  YLK
Sbjct: 515 REFLLDDNL-LTHLPEDLDFLVNLKVLTLSENPMEEPPKDVCAQGTEAVWDYLK 567



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 157/328 (47%), Gaps = 29/328 (8%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C  + +  +DL K+ +  +P  V  L  L +LY+  N L  LP  +G    ++ L ++ N
Sbjct: 253 CVLDQLRTIDLDKNRVAAIPEEVGHLAALHKLYVAHNSLPCLPEALGRCGGMSVLDVSHN 312

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L  +P  +A L ++  + L  N+L+++P ++   +SL +LYL    ++ +    + L N
Sbjct: 313 LLRGIPHGMAELAEMTEVGLSGNRLDKVPHLLCHWSSLHLLYLSDAGLRRLRGSFRRLVN 372

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N +   P +L  L+ L  L L  N + +LP E+ + + L  L L  NE V+ 
Sbjct: 373 LRFLDLSRNLLDHCPRQLCALRKLEVLSLDDNRIGQLPSELCSLSKLKILGLTGNEFVSF 432

Query: 278 PDMLGNLINLTRLRLSYN---RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           P+ + +L +L +L +  +   +L  VPE + K   L E  +E   L +LP    ++L S+
Sbjct: 433 PEEVFSLESLEKLYIGQDQGSKLTYVPENIGKLQSLKELYIENNYLETLP----AALGSM 488

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ +                     ++  HN +  +P  I   A+ L +  + DNLLT 
Sbjct: 489 PHLEV---------------------LDCRHNLLKVLPDAI-CHAQALREFLLDDNLLTH 526

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDI 422
           LP DL   V L  L L  N + +  +D+
Sbjct: 527 LPEDLDFLVNLKVLTLSENPMEEPPKDV 554



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 105/210 (50%), Gaps = 3/210 (1%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLA 155
           L C   ++  L LS + +  L  S  +L +L  L L  N L   P Q+  +  L  L L 
Sbjct: 343 LLCHWSSLHLLYLSDAGLRRLRGSFRRLVNLRFLDLSRNLLDHCPRQLCALRKLEVLSLD 402

Query: 156 ENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL---RFNRIKTVHPDI 212
           +N +  LP  L +L +L++L L  N+    P  V+ L SL+ LY+   + +++  V  +I
Sbjct: 403 DNRIGQLPSELCSLSKLKILGLTGNEFVSFPEEVFSLESLEKLYIGQDQGSKLTYVPENI 462

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L +L  L + +N +  LP  LG + +L  LD  HN L+ LP  I +   L    L  N
Sbjct: 463 GKLQSLKELYIENNYLETLPAALGSMPHLEVLDCRHNLLKVLPDAICHAQALREFLLDDN 522

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            L ++P+ L  L+NL  L LS N +E  P+
Sbjct: 523 LLTHLPEDLDFLVNLKVLTLSENPMEEPPK 552


>gi|344264787|ref|XP_003404471.1| PREDICTED: leucine-rich repeat-containing protein 1 [Loxodonta
           africana]
          Length = 524

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 193/385 (50%), Gaps = 28/385 (7%)

Query: 175 LDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I+ LPP
Sbjct: 17  IDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVRLRKLGLSDNEIQRLPP 76

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT L ++
Sbjct: 77  EIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVN 136

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              L+S+PE +    +L    +    L+ LPD L                         T
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSL-------------------------T 171

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L++  N
Sbjct: 172 QLRRLEELDLGNNEIYSLPESIGALV-HLKDLWLDGNQLSELPQEIGNLKSLLCLDVSEN 230

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           ++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L +++N+L  LP   G  + 
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEATGDCES 290

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L  L+L  N+L++LP++IG L  LS L+   N L S+P+EIG   +L    + DN  L  
Sbjct: 291 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNR-LTR 349

Query: 534 IPFELALCSNLQIMSLDNCPLSQIP 558
           IP EL+  + L ++ +    L  +P
Sbjct: 350 IPAELSQATELHVLDVAGNRLLHLP 374



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 200/435 (45%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++ ++D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 7   LWRCNR-HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVRLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N + E+P                         I 
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIP-----------------------ESIS 102

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
           +   L +     N +  LP    EL+NL  L +    L+ LP+ IGN   L +L+L+ N 
Sbjct: 103 FCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENL 162

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L  +PD L  L  L  L L  N + S+PE++   VHL +  ++G  LS LP  +  +L S
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALVHLKDLWLDGNQLSELPQEI-GNLKS 221

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           +  + +S N+    P    +  TS+  +    N ++ IP GI  + K LS + +  N LT
Sbjct: 222 LLCLDVSENRLERLPEEI-SGLTSLTDLVISQNLLETIPDGI-GKLKKLSILKVDQNRLT 279

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            LP   G    LTEL                       VL+ N L  LP SIG L+KL  
Sbjct: 280 QLPEATGDCESLTEL-----------------------VLTENRLLTLPKSIGKLKKLSN 316

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+ + NKL SLP EIG    L    ++ N+L  +P  +   T L  L V  N L  +P  
Sbjct: 317 LNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAELSQATELHVLDVAGNRLLHLPLS 376

Query: 514 IGTLENLHTLYLNDN 528
           + TL+ L  L+L+DN
Sbjct: 377 LTTLK-LKALWLSDN 390



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/314 (35%), Positives = 165/314 (52%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 84  LVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I ++   I  L +L  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALVHLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LK+L+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 204 LDGNQLSELPQEIGNLKSLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE    C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 264 KLKKLSILKVDQNRLTQLPEATGDCESLTELVLTENRLLTLPKS-IGKLKKLSNLNADRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 323 KLVSLPKEIGGCCSLT-VFCV--RDNRLTRIPAEL-SQATELHVLDVAGNRLLHLPLSLT 378

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 379 T-LKLKALWLSDNQ 391



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 167/349 (47%), Gaps = 56/349 (16%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L ELP++      L  L L  NE+  +P  + N + L  L +S N + 
Sbjct: 36  RSLEELLLDANQLRELPEQFFQLVRLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIP 95

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQ 354
            +PE++S C  L   +  G  L+ LP+    L +LT  S+N+I+L            P  
Sbjct: 96  EIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQ---------SLPEN 146

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
             ++Y                     NL+ + +++NLLT LP  L     L EL+LG N+
Sbjct: 147 IGNLY---------------------NLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           I  L E I  LV+L+ L L  N L +LP  IGNL+ L CLD+ EN+LE LP EI  L  L
Sbjct: 186 IYSLPESIGALVHLKDLWLDGNQLSELPQEIGNLKSLLCLDVSENRLERLPEEISGLTSL 245

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN-- 532
             L++  N L ++P  IG L  LS L V +N L  +PE  G  E+L  L L +N  L   
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEATGDCESLTELVLTENRLLTLP 305

Query: 533 --------------------NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                               ++P E+  C +L +  + +  L++IP+E+
Sbjct: 306 KSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEL 354


>gi|418668095|ref|ZP_13229499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756128|gb|EKR17754.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 427

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 189/365 (51%), Gaps = 55/365 (15%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LP  + KL +L++L+L  N+L +LP +IG + NL  L L EN LT++P  +  LQ L+ L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           +L HN+L  LP  + +L  L+ LYL  N+  ++  +I  L NL  L +  N++  LP E+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI------------------ 277
           G+L+NL +L L HN L  LPKEIG    L  L L++N+L  +                  
Sbjct: 207 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 278 -----PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
                P  +G L NL +L+L  N+L ++P+ + +  +L E +++G  L +LP+  +  L 
Sbjct: 267 KLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPEN-IGQLQ 325

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            +  + L  N+    P+    Q  ++ S++ EHNQ                        L
Sbjct: 326 RLQTLYLGNNQLNVLPN-KLEQLQNLESLDLEHNQ------------------------L 360

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS-SIGNLRKL 451
            +LP ++G    L  LNL  NQ++ L E+I+ L NL+ L L NN    LPS  I  +RKL
Sbjct: 361 NALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN---PLPSEKIERIRKL 417

Query: 452 --KCL 454
             +C+
Sbjct: 418 LPQCI 422



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 133/386 (34%), Positives = 210/386 (54%), Gaps = 26/386 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS S +T LP  + KL +L+ L L  N+L +LP +IG + NL  L L++N L 
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L L  N+L  +P  + +L +L+ L L  N++ T+  DI+ L  L  
Sbjct: 109 ALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQT 168

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+   +  E+G+L+NL +L L HN L  LPKEIG    L +L L HN+L  +P  
Sbjct: 169 LYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKE 228

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L ++P+ + +  +L +  +    L++LP   +  L ++  + L 
Sbjct: 229 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKE-IGQLQNLQKLKLY 287

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL ++++  N L +LP ++G
Sbjct: 288 ENQLTTLPKE-------------------------IGQLQNLQELDLDGNQLITLPENIG 322

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L LG NQ++ L   ++ L NLE L L +N L  LP  IG L+KL+ L+L+ N+
Sbjct: 323 QLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQ 382

Query: 461 LESLPNEIGFLKELQRLILQSNQLVS 486
           L +LP EI  LK L++L L +N L S
Sbjct: 383 LATLPEEIKQLKNLKKLYLHNNPLPS 408



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 134/381 (35%), Positives = 204/381 (53%), Gaps = 26/381 (6%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L G+KL +LP +IG + NL  L L +N L +LP  +  LQ L+ L L  N+L  LP  
Sbjct: 54  LNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMALPEE 113

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +L+ L L  N++  +  +I  L NL  L++  N++  LP ++ +L+ L TL L H
Sbjct: 114 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 173

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N    + KEIG    L +L L HN+L  +P  +G L NL  L L +N+L  +P+ + +  
Sbjct: 174 NQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQ 233

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L   ++    L++LP  +   L ++  + L++NK T  P                    
Sbjct: 234 NLQILHLRNNQLTTLPKEI-GQLQNLQKLLLNKNKLTTLPKE------------------ 274

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
                    + +NL K+ + +N LT+LP ++G    L EL+L  NQ+  L E+I  L  L
Sbjct: 275 -------IGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRL 327

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L L NN L  LP+ +  L+ L+ LDLE N+L +LP EIG L++LQ L L+ NQL +LP
Sbjct: 328 QTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLP 387

Query: 489 RAIGHLTNLSYLSVGENNLQS 509
             I  L NL  L +  N L S
Sbjct: 388 EEIKQLKNLKKLYLHNNPLPS 408



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 208/397 (52%), Gaps = 49/397 (12%)

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           A+    ++ + L N Q +R+L+L  +KL  LP  + KL +L++L L  N++  +  +I  
Sbjct: 34  AQTYYRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGK 93

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL  L +  N++  LP E+G+L+NL  L L  N L  +PKEIG    L  L+L HN+L
Sbjct: 94  LQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQL 153

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+ +  L  L  L L +N+  S+ + + +  +L    ++   L+ LP  +       
Sbjct: 154 ATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI------- 206

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                              Q  ++ S+  +HNQ++ +P  I  + +NL  +++++N LT+
Sbjct: 207 ------------------GQLRNLESLGLDHNQLNVLPKEI-GQLQNLQILHLRNNQLTT 247

Query: 395 LPLDLGTW-------------------VG----LTELNLGTNQISKLSEDIQNLVNLEVL 431
           LP ++G                     +G    L +L L  NQ++ L ++I  L NL+ L
Sbjct: 248 LPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQEL 307

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L  N L  LP +IG L++L+ L L  N+L  LPN++  L+ L+ L L+ NQL +LP+ I
Sbjct: 308 DLDGNQLITLPENIGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALPKEI 367

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G L  L  L++  N L ++PEEI  L+NL  LYL++N
Sbjct: 368 GKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 125/346 (36%), Positives = 191/346 (55%), Gaps = 27/346 (7%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
            N+ +L++  +K+  LP E+G+L+NL  L+L  N L  LPKEIG    L  L L  N+L+
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            +P+ +G L NL +L+L  N+L ++P+ + +  +L E N+    L++LP+ +        
Sbjct: 109 ALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDI-------- 160

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
                             Q   + ++   HNQ + I   I  + +NL  + +  N L  L
Sbjct: 161 -----------------EQLQRLQTLYLGHNQFNSILKEI-GQLQNLESLGLDHNQLNVL 202

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L  L L  NQ++ L ++I  L NL++L L NN L  LP  IG L+ L+ L 
Sbjct: 203 PKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLL 262

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L +NKL +LP EIG L+ LQ+L L  NQL +LP+ IG L NL  L +  N L ++PE IG
Sbjct: 263 LNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIG 322

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L+ L TLYL +N  LN +P +L    NL+ + L++  L+ +P EI
Sbjct: 323 QLQRLQTLYLGNNQ-LNVLPNKLEQLQNLESLDLEHNQLNALPKEI 367



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 147/309 (47%), Gaps = 50/309 (16%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           NI ++L N  N+  L LS ++L ++P  + K  +L   N++   L +LP  +   L ++ 
Sbjct: 40  NITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEI-GKLQNLQ 98

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + LS+N+  A P                             + +NL K+ + +N LT++
Sbjct: 99  QLHLSKNQLMALPEE-------------------------IGQLQNLQKLKLYENQLTAI 133

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L ELNL  NQ++ L EDI+ L  L+ L L +N    +   IG L+ L+ L 
Sbjct: 134 PKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLG 193

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L+ N+L  LP EIG L+ L+ L L  NQL  LP+ IG L NL  L +  N L ++P+EIG
Sbjct: 194 LDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIG 253

Query: 516 -----------------------TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                                   L+NL  L L +N  L  +P E+    NLQ + LD  
Sbjct: 254 QLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGN 312

Query: 553 PLSQIPSEI 561
            L  +P  I
Sbjct: 313 QLITLPENI 321


>gi|334321689|ref|XP_001379482.2| PREDICTED: leucine-rich repeat-containing protein 7 [Monodelphis
           domestica]
          Length = 1571

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 193/386 (50%), Gaps = 28/386 (7%)

Query: 174 VLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
           VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  LP
Sbjct: 56  VLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLP 115

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    LINLT+L L
Sbjct: 116 TTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLINLTQLYL 175

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           +   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P    
Sbjct: 176 NDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE--- 231

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                                 +  + +NL ++ M +N L +LP  +G    L  L++  
Sbjct: 232 ----------------------VLEQIQNLRELWMDNNALQTLPGSIGKLKMLVYLDMSK 269

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG L 
Sbjct: 270 NRIETVDLDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTVLPNAIGNLS 329

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  L 
Sbjct: 330 LLEEFDCSCNELESLPATIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK-LE 388

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIP 558
            +P E+     L++++L +  L  +P
Sbjct: 389 FLPEEIGQMQKLRVLNLSDNRLKNLP 414



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 202/443 (45%), Gaps = 50/443 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE +  LD S   +  +P  V      LEELYL  N++  LP Q            
Sbjct: 47  FRGEEEIVAVLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQ------------ 94

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q LR L +  N L+ LP  +  L +LK L +  N ++    +I+ 
Sbjct: 95  -----------LFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKC 143

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G    L  L+L+ N L
Sbjct: 144 CKCLTIIEASVNPISKLPDGFTQLINLTQLYLNDAFLEFLPANFGRLVKLRILELRENHL 203

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    +PE L +  +L E  ++  AL +LP G +  L  +
Sbjct: 204 KTLPKSMHKLAQLERLDLGNNEFSELPEVLEQIQNLRELWMDNNALQTLP-GSIGKLKML 262

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N+              + +++ +            S  + L  + +  N+L  
Sbjct: 263 VYLDMSKNR--------------IETVDLD-----------ISGCEALEDLLLSSNMLQQ 297

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    LT L +  NQ++ L   I NL  LE    S N L+ LP++IG L  L+ L
Sbjct: 298 LPDSIGLLKKLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPATIGYLHSLRTL 357

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            ++EN L  LP EIG  K +  + L+SN+L  LP  IG +  L  L++ +N L+++P   
Sbjct: 358 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 417

Query: 515 GTLENLHTLYLNDNTCLNNIPFE 537
             L+ L  L+L+DN     IP +
Sbjct: 418 TKLKELAALWLSDNQSKALIPLQ 440



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 173/358 (48%), Gaps = 51/358 (14%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           ++++P E+    + L  L L  N +EELPK++ NC  L  L +  N+L N+P  + +L+N
Sbjct: 64  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVN 123

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG                    
Sbjct: 124 LKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF------------------- 164

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
                 TQ  ++  +      ++ +P   F R   L  + +++N L +LP  +     L 
Sbjct: 165 ------TQLINLTQLYLNDAFLEFLPAN-FGRLVKLRILELRENHLKTLPKSMHKLAQLE 217

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES--- 463
            L+LG N+ S+L E ++ + NL  L + NN L+ LP SIG L+ L  LD+ +N++E+   
Sbjct: 218 RLDLGNNEFSELPEVLEQIQNLRELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVDL 277

Query: 464 --------------------LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
                               LP+ IG LK+L  L +  NQL  LP AIG+L+ L      
Sbjct: 278 DISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTVLPNAIGNLSLLEEFDCS 337

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N L+S+P  IG L +L TL +++N  L  +P E+  C N+ +MSL +  L  +P EI
Sbjct: 338 CNELESLPATIGYLHSLRTLAVDEN-FLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 394



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 180/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 123 NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLINLTQLYLNDAFLEF 182

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   ++ + NL  L
Sbjct: 183 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLEQIQNLREL 242

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 243 WMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVDLDISGCEALEDLLLSSNMLQQLPDSI 302

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P  +     L EF+     L SLP                 
Sbjct: 303 GLLKKLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLP----------------- 345

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                             +I + H               +L  + + +N L  LP ++G+
Sbjct: 346 -----------------ATIGYLH---------------SLRTLAVDENFLPELPREIGS 373

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 374 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 433

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 434 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 463


>gi|418727618|ref|ZP_13286206.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958976|gb|EKO22753.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 377

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 130/386 (33%), Positives = 194/386 (50%), Gaps = 51/386 (13%)

Query: 145 YVTNLTCLGLAE--NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           ++ +L+C   AE   +   L  +L N   +RVLDL   +L  LP+ + KL +L+ LYL +
Sbjct: 19  FLIHLSCEIQAEEPGTYQDLTKALQNPLDVRVLDLSRQELKTLPIEIGKLKNLQRLYLHY 78

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N++                         LP E+ +LKNL  L L  N L  LPKEI    
Sbjct: 79  NQLTV-----------------------LPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLK 115

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  LDL  N+L  +P  +  L NL  L L  NRL ++ + + +  +L   ++    L++
Sbjct: 116 NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 175

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LP+ +   L ++ ++ LS N+F  +P                             + +NL
Sbjct: 176 LPNEI-EQLKNLKSLYLSENQFATFPKE-------------------------IGQLQNL 209

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + + +N +T LP ++     L  L L  NQ+  L ++I+ L NL+ L LS N L  LP
Sbjct: 210 KVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILP 269

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
             +G L  L+ LDL  N+L++LP EI  LK LQ L L +NQL  LP+ IG L NL +LS+
Sbjct: 270 KEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSL 329

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDN 528
             N L ++P EI  L+NL TLYLN+N
Sbjct: 330 VYNQLTTLPNEIEQLKNLQTLYLNNN 355



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 113/331 (34%), Positives = 180/331 (54%), Gaps = 26/331 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + KL +L+ LYL+ N+L  LP +I  + NL  L L  N LT+LP  
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VLDL  N+L  LP  + +L +L++LYL  NR+ T+  DI+ L NL  L + +
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+ +LKNL +L L+ N     PKEIG    L  L L +N++  +P+ +  L 
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLK 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LS N+L ++P+ + +                        L ++  + LS N+ T
Sbjct: 231 KLQYLYLSDNQLITLPKEIEQ------------------------LKNLQTLDLSYNQLT 266

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++ +++  +NQ+  +P  I  + KNL  + + +N LT LP ++G    L
Sbjct: 267 ILPKEV-GQLENLQTLDLRNNQLKTLPKEI-EQLKNLQTLFLSNNQLTILPQEIGKLKNL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
             L+L  NQ++ L  +I+ L NL+ L L+NN
Sbjct: 325 LWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/313 (35%), Positives = 166/313 (53%), Gaps = 4/313 (1%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            LDL+   L+ LP EIG    L  L L +N+L  +P  +  L NL  L L  NRL ++P+
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 109

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + +  +L   ++    L+ LP  +   L ++  + L  N+ T   S    Q  ++ S++
Sbjct: 110 EIEQLKNLQVLDLGSNQLTVLPQEI-EQLKNLQLLYLHSNRLTTL-SKDIEQLQNLKSLD 167

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQ+  +P  I  + KNL  + + +N   + P ++G    L  L L  NQI+ L  +I
Sbjct: 168 LSNNQLTTLPNEI-EQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEI 226

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L  L+ L LS+N L  LP  I  L+ L+ LDL  N+L  LP E+G L+ LQ L L++N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL +LP+ I  L NL  L +  N L  +P+EIG L+NL  L L  N  L  +P E+    
Sbjct: 287 QLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQ-LTTLPNEIEQLK 345

Query: 543 NLQIMSLDNCPLS 555
           NLQ + L+N  LS
Sbjct: 346 NLQTLYLNNNQLS 358



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 154/310 (49%), Gaps = 27/310 (8%)

Query: 252 EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN 311
           ++L K + N   +  LDL   EL  +P  +G L NL RL L YN+L  +P+ + +  +L 
Sbjct: 36  QDLTKALQNPLDVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 95

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
              +    L++LP  +   L ++  + L  N+ T  P                       
Sbjct: 96  LLYLRSNRLTTLPKEI-EQLKNLQVLDLGSNQLTVLPQE--------------------- 133

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
                 + KNL  + +  N LT+L  D+     L  L+L  NQ++ L  +I+ L NL+ L
Sbjct: 134 ----IEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSL 189

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            LS N     P  IG L+ LK L L  N++  LPNEI  LK+LQ L L  NQL++LP+ I
Sbjct: 190 YLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEI 249

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
             L NL  L +  N L  +P+E+G LENL TL L +N  L  +P E+    NLQ + L N
Sbjct: 250 EQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLSN 308

Query: 552 CPLSQIPSEI 561
             L+ +P EI
Sbjct: 309 NQLTILPQEI 318



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 91/264 (34%), Positives = 150/264 (56%), Gaps = 1/264 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  +E+L +L+ LYL+ N+L +L   I  + NL  L L+ N LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  L+ L+ L L  N+    P  + +L +LK+L+L  N+I  +  +I  L  L  
Sbjct: 175 TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQY 234

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN++  LP E+ +LKNL TLDL++N L  LPKE+G    L TLDL++N+L  +P  
Sbjct: 235 LYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L LS N+L  +P+ + K  +L   ++    L++LP+  +  L ++  + L+
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNE-IEQLKNLQTLYLN 353

Query: 341 RNKFTAYPSGGPTQFTSVYSINFE 364
            N+ ++       +      I FE
Sbjct: 354 NNQLSSQEKKRTRKLIPKCQIYFE 377


>gi|456970650|gb|EMG11404.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 426

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 186/360 (51%), Gaps = 53/360 (14%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LP  + KL +L++L+L  N+L +LP +IG + NL  L L EN LT++P  +  LQ L+ L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           +L HN+L  LP  + +L  L+ LYL  N+  ++  +I  L NL  L +  N++  LP E+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI------------------ 277
           G+L+NL +L L HN L  LPKEIG    L  L L++N+L  +                  
Sbjct: 207 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 278 -----PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
                P  +G L NL +L+L  N+L ++P+ + +  +L E +++G  L +LP+  +  L 
Sbjct: 267 KLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPEN-IGQLQ 325

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            +  + L  N+    P+    Q  ++ S++ EHNQ                        L
Sbjct: 326 RLQTLYLGNNQLNVLPN-KLEQLQNLESLDLEHNQ------------------------L 360

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS-SIGNLRKL 451
            +LP ++G    L  LNL  NQ++ L E+I+ L NL+ L L NN    LPS  I  +RKL
Sbjct: 361 NALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN---PLPSEKIERIRKL 417



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 133/386 (34%), Positives = 210/386 (54%), Gaps = 26/386 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS S +T LP  + KL +L+ L L  N+L +LP +IG + NL  L L++N L 
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L L  N+L  +P  + +L +L+ L L  N++ T+  DI+ L  L  
Sbjct: 109 ALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQT 168

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+   +  E+G+L+NL +L L HN L  LPKEIG    L +L L HN+L  +P  
Sbjct: 169 LYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKE 228

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L ++P+ + +  +L +  +    L++LP   +  L ++  + L 
Sbjct: 229 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKE-IGQLQNLQKLKLY 287

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL ++++  N L +LP ++G
Sbjct: 288 ENQLTTLPKE-------------------------IGQLQNLQELDLDGNQLITLPENIG 322

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L LG NQ++ L   ++ L NLE L L +N L  LP  IG L+KL+ L+L+ N+
Sbjct: 323 QLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQ 382

Query: 461 LESLPNEIGFLKELQRLILQSNQLVS 486
           L +LP EI  LK L++L L +N L S
Sbjct: 383 LATLPEEIKQLKNLKKLYLHNNPLPS 408



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 134/381 (35%), Positives = 204/381 (53%), Gaps = 26/381 (6%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L G+KL +LP +IG + NL  L L +N L +LP  +  LQ L+ L L  N+L  LP  
Sbjct: 54  LNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMALPEE 113

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +L+ L L  N++  +  +I  L NL  L++  N++  LP ++ +L+ L TL L H
Sbjct: 114 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 173

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N    + KEIG    L +L L HN+L  +P  +G L NL  L L +N+L  +P+ + +  
Sbjct: 174 NQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQ 233

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L   ++    L++LP  +   L ++  + L++NK T  P                    
Sbjct: 234 NLQILHLRNNQLTTLPKEI-GQLQNLQKLLLNKNKLTTLPKE------------------ 274

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
                    + +NL K+ + +N LT+LP ++G    L EL+L  NQ+  L E+I  L  L
Sbjct: 275 -------IGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRL 327

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L L NN L  LP+ +  L+ L+ LDLE N+L +LP EIG L++LQ L L+ NQL +LP
Sbjct: 328 QTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLP 387

Query: 489 RAIGHLTNLSYLSVGENNLQS 509
             I  L NL  L +  N L S
Sbjct: 388 EEIKQLKNLKKLYLHNNPLPS 408



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 206/391 (52%), Gaps = 49/391 (12%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++ + L N Q +R+L+L  +KL  LP  + KL +L++L L  N++  +  +I  L NL  
Sbjct: 40  NITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQ 99

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+L+NL  L L  N L  +PKEIG    L  L+L HN+L  +P+ 
Sbjct: 100 LHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPED 159

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  L  L L +N+  S+ + + +  +L    ++   L+ LP  +             
Sbjct: 160 IEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI------------- 206

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
                        Q  ++ S+  +HNQ++ +P  I  + +NL  +++++N LT+LP ++G
Sbjct: 207 ------------GQLRNLESLGLDHNQLNVLPKEI-GQLQNLQILHLRNNQLTTLPKEIG 253

Query: 401 TW-------------------VG----LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
                                +G    L +L L  NQ++ L ++I  L NL+ L L  N 
Sbjct: 254 QLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQ 313

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L  LP +IG L++L+ L L  N+L  LPN++  L+ L+ L L+ NQL +LP+ IG L  L
Sbjct: 314 LITLPENIGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKL 373

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
             L++  N L ++PEEI  L+NL  LYL++N
Sbjct: 374 QTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 128/363 (35%), Positives = 199/363 (54%), Gaps = 31/363 (8%)

Query: 203 NRIKTVHPDIQYL----SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
           N ++T + +I  +     N+ +L++  +K+  LP E+G+L+NL  L+L  N L  LPKEI
Sbjct: 32  NEVQTYYRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEI 91

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
           G    L  L L  N+L+ +P+ +G L NL +L+L  N+L ++P+ + +  +L E N+   
Sbjct: 92  GKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHN 151

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
            L++LP+ +                          Q   + ++   HNQ + I   I  +
Sbjct: 152 QLATLPEDI-------------------------EQLQRLQTLYLGHNQFNSILKEI-GQ 185

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
            +NL  + +  N L  LP ++G    L  L L  NQ++ L ++I  L NL++L L NN L
Sbjct: 186 LQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQL 245

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
             LP  IG L+ L+ L L +NKL +LP EIG L+ LQ+L L  NQL +LP+ IG L NL 
Sbjct: 246 TTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQ 305

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N L ++PE IG L+ L TLYL +N  LN +P +L    NL+ + L++  L+ +P
Sbjct: 306 ELDLDGNQLITLPENIGQLQRLQTLYLGNNQ-LNVLPNKLEQLQNLESLDLEHNQLNALP 364

Query: 559 SEI 561
            EI
Sbjct: 365 KEI 367


>gi|82240198|sp|Q7SXW3.1|LRC40_DANRE RecName: Full=Leucine-rich repeat-containing protein 40
 gi|32766407|gb|AAH55223.1| Leucine rich repeat containing 40 [Danio rerio]
          Length = 601

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 250/502 (49%), Gaps = 51/502 (10%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E +  L LS + +T LP  V +LT+L  L+L  N +  +P  +G + NL  L L+ N L 
Sbjct: 126 EQLQKLILSHNKLTELPSGVWRLTNLRCLHLQQNLIEQIPRDLGQLVNLDELDLSNNHLI 185

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            +P+SLANLQ L  LDL  NKL  LP  + ++ +L++L    N+++++ P +  + +L  
Sbjct: 186 DIPESLANLQNLVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQ 245

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE-IGNCTMLVTLDLQHNELVNIPD 279
           L +R NK+R L PEL   K L  L   +N +E L  E + +   L  L+L+ N++ ++P+
Sbjct: 246 LYLRHNKLRYL-PELPCCKTLKELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPE 304

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +  L  L RL L+ N + S+P  L     L   ++EG  L ++   LL+  T    +  
Sbjct: 305 EITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTG-ELLKY 363

Query: 340 SRNKFTAYPSGG-----------PTQ-------FTSVYSINFEHNQIDKIPYGIFSRAKN 381
            R++    P+GG           P+Q         ++ ++++   Q   IP  +F     
Sbjct: 364 LRSRVQEPPNGGLKEEPKTAMTFPSQAKINVHAIKTLKTLDYSEKQDATIPDDVFDAVDG 423

Query: 382 --LSKVNMKDNLLTSLP---LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
             ++ VN   N LT++P   +DL     L ++NLG N+++ +  D  +L  L  + L NN
Sbjct: 424 NPVANVNFSKNQLTAVPHRIVDLKD--SLADINLGFNKLTTIPADFCHLKQLMHIDLRNN 481

Query: 437 LLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
           LL  LP  +  L KL+ + L  N+ +S P  +  +  L+ +++ SNQ       +G +  
Sbjct: 482 LLISLPMELEGLIKLRSVILSFNRFKSFPEVLYRIPSLETILISSNQ-------VGGIDA 534

Query: 497 LSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ 556
           +               ++ TL  L TL L++N  +  +P EL  C++L+ + LD  P   
Sbjct: 535 V---------------QMKTLSRLSTLDLSNNDIM-QVPPELGNCTSLRALMLDGNPFRN 578

Query: 557 IPSEIVVGGPSLIIRYLKMQGP 578
             + I++ G   ++ YL+ + P
Sbjct: 579 PRAAILIKGTDAVLEYLRSRIP 600



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 167/354 (47%), Gaps = 50/354 (14%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L+L+   L E+P  +    +    + + N      D      +LT+L LS N+L+S+P+ 
Sbjct: 39  LNLSGRGLTEVPASVWRLNLDTPQEAKQNVSFGAEDRWWEQTDLTKLLLSSNKLQSIPDD 98

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           +     L   ++    LSSLPD  +  L  +  + LS NK T  PSG             
Sbjct: 99  VKLLPALVVLDIHDNQLSSLPDS-IGDLEQLQKLILSHNKLTELPSG------------- 144

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
                         R  NL  ++++ NL+  +P DLG  V L EL+L  N +  + E + 
Sbjct: 145 ------------VWRLTNLRCLHLQQNLIEQIPRDLGQLVNLDELDLSNNHLIDIPESLA 192

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           NL NL  L LS N LK LP +I  ++ L+ LD   N++ES+P  +  ++ L++L L+ N+
Sbjct: 193 NLQNLVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNK 252

Query: 484 LVSLP-----------------------RAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L  LP                         + HL  LS L + +N ++S+PEEI  L+ L
Sbjct: 253 LRYLPELPCCKTLKELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGL 312

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
             L L +N  ++++P  L     L+ +SL+  PL  I  +++  G   +++YL+
Sbjct: 313 ERLDLTNND-ISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLR 365



 Score = 46.2 bits (108), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 24/151 (15%)

Query: 100 EENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL 159
           ++++ +++L  + +T +P     L  L  + L  N L SLP +                 
Sbjct: 447 KDSLADINLGFNKLTTIPADFCHLKQLMHIDLRNNLLISLPME----------------- 489

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNL 218
                 L  L +LR + L  N+    P V+Y++ SL+ + +  N++  +    ++ LS L
Sbjct: 490 ------LEGLIKLRSVILSFNRFKSFPEVLYRIPSLETILISSNQVGGIDAVQMKTLSRL 543

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHN 249
           S L + +N I ++PPELG   +L  L L  N
Sbjct: 544 STLDLSNNDIMQVPPELGNCTSLRALMLDGN 574


>gi|194745132|ref|XP_001955046.1| GF16442 [Drosophila ananassae]
 gi|190628083|gb|EDV43607.1| GF16442 [Drosophila ananassae]
          Length = 1847

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/336 (35%), Positives = 174/336 (51%), Gaps = 27/336 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  CV++ E  +    LS LP                
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCVNMQELILTENFLSELP---------------- 306

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
                  PS G  Q T + ++N + N ++ +P  I  +  NL  ++++DN L  LP +LG
Sbjct: 307 -------PSIG--QMTKLSNLNVDRNALEYLPLEI-GQCANLGVLSLRDNKLKRLPPELG 356

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
               L  L++  NQ+  L   + NL  L+ + LS N
Sbjct: 357 NCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSEN 391



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 207/424 (48%), Gaps = 51/424 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LGL++N +  LP 
Sbjct: 18  VDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEINRLPP 77

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            + N + L  LD+  N + ++P  +  L SL++     N I  +      L NL++L + 
Sbjct: 78  DIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLN 137

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE+ ++P  LG L
Sbjct: 138 DMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYL 197

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             L  L L +N+L+ +P  L                     GLL+ LT ++   +S N+ 
Sbjct: 198 PGLHELWLDHNQLQRLPPEL---------------------GLLTKLTYLD---VSENRL 233

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
              P                 N+I     G+ S    L+ +++  NLL +LP  +     
Sbjct: 234 EELP-----------------NEIS----GLVS----LTDLDLAQNLLETLPDGIAKLSR 268

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LT L L  N++ +L++ + N VN++ L+L+ N L +LP SIG + KL  L+++ N LE L
Sbjct: 269 LTILKLDQNRLQRLNDTLGNCVNMQELILTENFLSELPPSIGQMTKLSNLNVDRNALEYL 328

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  +  L+ L  ++
Sbjct: 329 PLEIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQ-LKAVW 387

Query: 525 LNDN 528
           L++N
Sbjct: 388 LSEN 391



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 190/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  NRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G    +Q LIL  N L  LP +IG +T LS L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCVNMQELILTENFLSELPPSIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKRLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 191/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEINRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++         N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCVNMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L+ LN+  N +  L  +I    NL VL L +N LK+LP  +GN   
Sbjct: 301 FLSELPPSIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|418678790|ref|ZP_13240064.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321980|gb|EJO69840.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 379

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 179/333 (53%), Gaps = 26/333 (7%)

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           +IL L  +++ T+  +I  L NL  L +  N++  LP E+G+L+NL  LDL  N L  LP
Sbjct: 51  RILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILP 110

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
           KEIG    L  L+L  N L  +PD +G L NL  L L  N+L  +PE + +  +L   N+
Sbjct: 111 KEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNL 170

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
           +   L+ LP+ +   L ++  + L  NK T  P                    +KI    
Sbjct: 171 DLNKLTILPEKI-GQLQNLQVLNLDLNKLTILP--------------------EKI---- 205

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             + +NL  +N + N LT+ P ++G    L +L L  NQ++ L E+I  L  L+ L L N
Sbjct: 206 -GQLQNLQILNSQGNQLTTFPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGN 264

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N L+ LP  I  L+KL+ L LE N++ + P EIG L+ LQ L L  NQL +LP+ IG L 
Sbjct: 265 NPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQ 324

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           NL  L++  N L ++P+E+G L+ L  L L +N
Sbjct: 325 NLQELNLEFNQLATLPKEVGQLQKLRKLNLYNN 357



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/345 (33%), Positives = 184/345 (53%), Gaps = 26/345 (7%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +L ++L N +  R+L+L  +KL  L   + KL +L+ LYL +N++ T+  +I  L NL +
Sbjct: 39  NLTEALQNPKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQV 98

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+L+NL  L+L  N L  LP E+G    L  L+L  N+L  +P+ 
Sbjct: 99  LDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEK 158

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L  +PE + +  +L   N++   L+ LP+ +             
Sbjct: 159 IGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKI------------- 205

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
                        Q  ++  +N + NQ+   P  I   +K L K+ +  N LT+LP ++G
Sbjct: 206 ------------GQLQNLQILNSQGNQLTTFPKEIGQLSK-LQKLYLYGNQLTTLPEEIG 252

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L EL LG N +  L ++I+ L  L+ L L  N +   P  IG L+ L+ L+L  N+
Sbjct: 253 QLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQ 312

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
           L +LP EIG L+ LQ L L+ NQL +LP+ +G L  L  L++  N
Sbjct: 313 LTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNN 357



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/320 (34%), Positives = 178/320 (55%), Gaps = 5/320 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS S +  L   + KL +L++LYL  N+L +LP++IG + NL  L L  N LT LP  
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+VL+L  N+L  LP  V +L +L++L L  N++  +   I  L NL +L++  
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDL 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+  LP ++G+L+NL  L+L  N L  LP++IG    L  L+ Q N+L   P  +G L 
Sbjct: 173 NKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLS 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L +L L  N+L ++PE + +   L E  +    L +LP   +  L  +  + L  N+ T
Sbjct: 233 KLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKE-IEQLQKLQTLYLEGNQIT 291

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P     Q  ++  +N   NQ+  +P  I  + +NL ++N++ N L +LP ++G    L
Sbjct: 292 TFPK-EIGQLQNLQELNLGFNQLTTLPQEI-GQLQNLQELNLEFNQLATLPKEVGQLQKL 349

Query: 406 TELNLGTNQISKLSEDIQNL 425
            +LNL  N I+  SE I+ +
Sbjct: 350 RKLNLYNNPIA--SEKIERI 367



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 162/296 (54%), Gaps = 3/296 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L L+ + +T LP  + +L +L+ L LY N+L  LP +IG + NL  L L  N 
Sbjct: 69  KLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNR 128

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT LPD +  LQ L+VL+L  NKL  LP  + +L +L++L L  N++  +   I  L NL
Sbjct: 129 LTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNL 188

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            +L++  NK+  LP ++G+L+NL  L+   N L   PKEIG  + L  L L  N+L  +P
Sbjct: 189 QVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLSKLQKLYLYGNQLTTLP 248

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           + +G L  L  L L  N L ++P+ + +   L    +EG  +++ P   +  L ++  + 
Sbjct: 249 EEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKE-IGQLQNLQELN 307

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
           L  N+ T  P     Q  ++  +N E NQ+  +P  +  + + L K+N+ +N + S
Sbjct: 308 LGFNQLTTLPQ-EIGQLQNLQELNLEFNQLATLPKEV-GQLQKLRKLNLYNNPIAS 361



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 118/335 (35%), Positives = 166/335 (49%), Gaps = 31/335 (9%)

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           R L   L   K+   L+L+ + L  L KEIG    L  L L +N+L  +P+ +G L NL 
Sbjct: 38  RNLTEALQNPKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQ 97

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTA 346
            L L  N L  +P+ + K  +L   N+    L+ LPD  G L +L  +N   L  NK T 
Sbjct: 98  VLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLN---LDLNKLTI 154

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P                    +KI      + +NL  +N+  N LT LP  +G    L 
Sbjct: 155 LP--------------------EKI-----GQLQNLQVLNLDLNKLTILPEKIGQLQNLQ 189

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            LNL  N+++ L E I  L NL++L    N L   P  IG L KL+ L L  N+L +LP 
Sbjct: 190 VLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLSKLQKLYLYGNQLTTLPE 249

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
           EIG LK+LQ L L +N L +LP+ I  L  L  L +  N + + P+EIG L+NL  L L 
Sbjct: 250 EIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLG 309

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  L  +P E+    NLQ ++L+   L+ +P E+
Sbjct: 310 FNQ-LTTLPQEIGQLQNLQELNLEFNQLATLPKEV 343


>gi|395540076|ref|XP_003771986.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Sarcophilus harrisii]
          Length = 908

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 147/502 (29%), Positives = 237/502 (47%), Gaps = 38/502 (7%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNI----EKEFLRCKEE-----NILNLDLSKSSI 113
           KT  VK+   +K K  T + EP  A L +    E E +    E     N+  L++  + I
Sbjct: 212 KTQDVKYLYLDKNKIKTFEVEPNMASLELLSMKENELIALPPEIKLLSNLCVLNVCHNHI 271

Query: 114 THLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLR 173
             LP  + +L  L +L+L  NK    P+ +G +  L  L L+ N L  LP+ +AN++ L 
Sbjct: 272 ASLPTEISQLVWLRQLFLDNNKFLEFPTILGSLEKLETLSLSGNGLKRLPEMMANMKNLM 331

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           VLDL  N+ +  P +V  LT L  L +  N I ++  +I+ L NL  L +  NK+  LP 
Sbjct: 332 VLDLNSNQFSIFPNIVCYLTKLIKLSVSKNLISSLPKEIKQLKNLEELFLNHNKLTFLPV 391

Query: 234 E-----------------------LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           +                       +   K L  L L  N L++L KEI +C  L  L L 
Sbjct: 392 QIFRLLKLKRLHLLDNKLESLSHNIENFKELKVLQLDKNLLKQLNKEIYSCAKLECLSLS 451

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
            N L  IP  +  L NL  L ++ N++ ++   +S   +L      G A+  +P   + +
Sbjct: 452 DNALEIIPGNIHRLRNLRALYINRNKIMAINVNISHMKYLKVLEFSGNAIKGIPIE-IKN 510

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
              I  + LS NK   +P G     + +  +N   N + +IP  + S ++ L  + +  N
Sbjct: 511 CNQIRKMDLSFNKIQDFPVGL-CALSFLEYLNLNGNDLSEIPLDL-SFSRQLIHLELSQN 568

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+     +     L  LNL  N+IS++   I N+ +L VL+L+ N  +  P  +  L  
Sbjct: 569 NLSFFSDYICRLFNLDYLNLSKNKISQVPPSISNMTSLRVLILNGNNFEIFPKELCTLEN 628

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN---L 507
           L+ LDL EN+++ +P+EI  L+ +Q L   SN+  S P  + HL+ L  L + + N   L
Sbjct: 629 LQILDLSENQIQYVPSEIRNLQAIQNLDFSSNRFGSFPIELCHLSTLKELQLCQKNGSKL 688

Query: 508 QSIPEEIGTLENLHTLYLNDNT 529
             +P+E+  L  L  L ++ NT
Sbjct: 689 TQVPDELSNLTQLEILDISHNT 710



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 228/459 (49%), Gaps = 37/459 (8%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C    ++ L +SK+ I+ LP  +++L +LEEL+L  NKL  LP QI  +  L  L L +N
Sbjct: 348 CYLTKLIKLSVSKNLISSLPKEIKQLKNLEELFLNHNKLTFLPVQIFRLLKLKRLHLLDN 407

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNEL-----------------------PMVVYKLTS 194
            L SL  ++ N ++L+VL L  N L +L                       P  +++L +
Sbjct: 408 KLESLSHNIENFKELKVLQLDKNLLKQLNKEIYSCAKLECLSLSDNALEIIPGNIHRLRN 467

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L+ LY+  N+I  ++ +I ++  L +L    N I+ +P E+     +  +DL+ N +++ 
Sbjct: 468 LRALYINRNKIMAINVNISHMKYLKVLEFSGNAIKGIPIEIKNCNQIRKMDLSFNKIQDF 527

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P  +   + L  L+L  N+L  IP  L     L  L LS N L    + + +  +L+  N
Sbjct: 528 PVGLCALSFLEYLNLNGNDLSEIPLDLSFSRQLIHLELSQNNLSFFSDYICRLFNLDYLN 587

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +    +S +P   +S++TS+  + L+ N F  +P    T   ++  ++   NQI  +P  
Sbjct: 588 LSKNKISQVPPS-ISNMTSLRVLILNGNNFEIFPKELCT-LENLQILDLSENQIQYVP-- 643

Query: 375 IFSRAKNLSKV---NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE---DIQNLVNL 428
             S  +NL  +   +   N   S P++L     L EL L     SKL++   ++ NL  L
Sbjct: 644 --SEIRNLQAIQNLDFSSNRFGSFPIELCHLSTLKELQLCQKNGSKLTQVPDELSNLTQL 701

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           E+L +S+N +K+LP +IG L+ L       N +  LP     L +LQ L +  N+L +LP
Sbjct: 702 EILDISHNTIKELPKNIGELKNLVTFKANNNLIGLLPLSFESLNKLQHLNMSGNRLTTLP 761

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEI--GTLENLHTLYL 525
            ++ +L++L  ++  EN L   P EI  G + N+   YL
Sbjct: 762 NSLNNLSSLREINFDENPLVKPPAEICKGKVLNVIGHYL 800



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 208/449 (46%), Gaps = 74/449 (16%)

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKT--VHPDIQYLSNLSMLSMRDNKIRELPPELGELK 239
           L + P  ++K   +K LYL  N+IKT  V P+   +++L +LSM++N++  LPPE+  L 
Sbjct: 203 LQKFPKGLFKTQDVKYLYLDKNKIKTFEVEPN---MASLELLSMKENELIALPPEIKLLS 259

Query: 240 NLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLES 299
           NL  L++ HNH+  LP EI     L  L L +N+ +  P +LG+L  L  L LS N L+ 
Sbjct: 260 NLCVLNVCHNHIASLPTEISQLVWLRQLFLDNNKFLEFPTILGSLEKLETLSLSGNGLKR 319

Query: 300 VPETLSKCVHL-------NEFNVEG---CALS-----SLPDGLLSSL-------TSINNI 337
           +PE ++   +L       N+F++     C L+     S+   L+SSL        ++  +
Sbjct: 320 LPEMMANMKNLMVLDLNSNQFSIFPNIVCYLTKLIKLSVSKNLISSLPKEIKQLKNLEEL 379

Query: 338 TLSRNKFTAYP----------------------SGGPTQFTSVYSINFEHNQIDKIPYGI 375
            L+ NK T  P                      S     F  +  +  + N + ++   I
Sbjct: 380 FLNHNKLTFLPVQIFRLLKLKRLHLLDNKLESLSHNIENFKELKVLQLDKNLLKQLNKEI 439

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
           +S AK L  +++ DN L  +P ++     L  L +  N+I  ++ +I ++  L+VL  S 
Sbjct: 440 YSCAK-LECLSLSDNALEIIPGNIHRLRNLRALYINRNKIMAINVNISHMKYLKVLEFSG 498

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPN-----------------------EIGFLK 472
           N +K +P  I N  +++ +DL  NK++  P                        ++ F +
Sbjct: 499 NAIKGIPIEIKNCNQIRKMDLSFNKIQDFPVGLCALSFLEYLNLNGNDLSEIPLDLSFSR 558

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
           +L  L L  N L      I  L NL YL++ +N +  +P  I  + +L  L LN N    
Sbjct: 559 QLIHLELSQNNLSFFSDYICRLFNLDYLNLSKNKISQVPPSISNMTSLRVLILNGNN-FE 617

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             P EL    NLQI+ L    +  +PSEI
Sbjct: 618 IFPKELCTLENLQILDLSENQIQYVPSEI 646


>gi|456823117|gb|EMF71587.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 389

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 126/367 (34%), Positives = 187/367 (50%), Gaps = 49/367 (13%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N  ++RVLDL   +L  LP+ + KL +L+ LYL +N++                
Sbjct: 38  LTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTV-------------- 83

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
                    LP E+ +LKNL  L L  N L  LPKEI     L  LDL  N+L  +P  +
Sbjct: 84  ---------LPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEI 134

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L L  NRL ++ + + +  +L   ++    L++LP+ +   L ++ ++ LS 
Sbjct: 135 EQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEI-EQLKNLKSLYLSE 193

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P                             + +NL  + + +N +T LP ++  
Sbjct: 194 NQFATFPKE-------------------------IGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L L  NQ+  L ++I+ L NL+ L LS N L  LP  +G L  L+ LDL  N+L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
           ++LP EI  LK LQ L L +NQL+ LP+ IG L NL +LS+  N L ++P EI  L+NL 
Sbjct: 289 KTLPKEIEQLKNLQTLFLSNNQLIILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQ 348

Query: 522 TLYLNDN 528
           TLYLN+N
Sbjct: 349 TLYLNNN 355



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/331 (33%), Positives = 179/331 (54%), Gaps = 26/331 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + KL +L+ LYL+ N+L  LP +I  + NL  L L  N LT+LP  
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VLDL  N+L  LP  + +L +L++LYL  NR+ T+  DI+ L NL  L + +
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+ +LKNL +L L+ N     PKEIG    L  L L +N++  +P+ +  L 
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLK 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LS N+L ++P+ + +                        L ++  + LS N+ T
Sbjct: 231 KLQYLYLSDNQLITLPKEIEQ------------------------LKNLQTLDLSYNQLT 266

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++ +++  +NQ+  +P  I  + KNL  + + +N L  LP ++G    L
Sbjct: 267 ILPKEV-GQLENLQTLDLRNNQLKTLPKEI-EQLKNLQTLFLSNNQLIILPQEIGKLKNL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
             L+L  NQ++ L  +I+ L NL+ L L+NN
Sbjct: 325 LWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 152/309 (49%), Gaps = 27/309 (8%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  LDL   EL  +P  +G L NL RL L YN+L  +P+ + +  +L  
Sbjct: 37  DLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQL 96

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
             +    L++LP  +   L ++  + L  N+ T  P                        
Sbjct: 97  LYLRSNRLTTLPKEI-EQLKNLQVLDLGSNQLTVLPQE---------------------- 133

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
                + KNL  + +  N LT+L  D+     L  L+L  NQ++ L  +I+ L NL+ L 
Sbjct: 134 ---IEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 190

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           LS N     P  IG L+ LK L L  N++  LPNEI  LK+LQ L L  NQL++LP+ I 
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIE 250

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L +  N L  +P+E+G LENL TL L +N  L  +P E+    NLQ + L N 
Sbjct: 251 QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLSNN 309

Query: 553 PLSQIPSEI 561
            L  +P EI
Sbjct: 310 QLIILPQEI 318



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 147/246 (59%), Gaps = 1/246 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  +E+L +L+ LYL+ N+L +L   I  + NL  L L+ N LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  L+ L+ L L  N+    P  + +L +LK+L+L  N+I  +  +I  L  L  
Sbjct: 175 TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQY 234

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN++  LP E+ +LKNL TLDL++N L  LPKE+G    L TLDL++N+L  +P  
Sbjct: 235 LYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L LS N+L  +P+ + K  +L   ++    L++LP+  +  L ++  + L+
Sbjct: 295 IEQLKNLQTLFLSNNQLIILPQEIGKLKNLLWLSLVYNQLTTLPNE-IEQLKNLQTLYLN 353

Query: 341 RNKFTA 346
            N+F++
Sbjct: 354 NNQFSS 359



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N  +++ LDL   +L++LP EIG LK LQRL L  NQL  LP+ I  L NL 
Sbjct: 36  RDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 95

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N L ++P+EI  L+NL  L L  N  L  +P E+    NLQ++ L +  L+ + 
Sbjct: 96  LLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQ-LTVLPQEIEQLKNLQLLYLHSNRLTTLS 154

Query: 559 SEI 561
            +I
Sbjct: 155 KDI 157


>gi|338718176|ref|XP_001918318.2| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1 [Equus caballus]
          Length = 524

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 193/385 (50%), Gaps = 28/385 (7%)

Query: 175 LDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I+ LPP
Sbjct: 17  IDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPP 76

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT L ++
Sbjct: 77  EIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVN 136

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              L+S+PE +    +L    +    L+ LPD L                         T
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSL-------------------------T 171

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L++  N
Sbjct: 172 QLRRLEELDLGNNEIYNLPESIGA-LFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           ++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L +++N+L  LP  +G  + 
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLAQLPEAVGDCES 290

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L  L+L  N+L++LP++IG L  LS L+   N L S+P+EIG    L    + DN  L  
Sbjct: 291 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCGLTVFCVRDNR-LTR 349

Query: 534 IPFELALCSNLQIMSLDNCPLSQIP 558
           IP E++  + L ++ +    L  +P
Sbjct: 350 IPAEVSQATELHVLDVAGNRLLHLP 374



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/314 (35%), Positives = 165/314 (52%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 84  LVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALFHLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 204 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE +  C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 264 KLKKLSILKVDQNRLAQLPEAVGDCESLTELVLTENRLLTLPKS-IGKLKKLSNLNADRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 323 KLVSLPKEIGGCCGLT-VFCV--RDNRLTRIPAEV-SQATELHVLDVAGNRLLHLPLSLT 378

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 379 T-LKLKALWLSDNQ 391



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 193/405 (47%), Gaps = 28/405 (6%)

Query: 125 HLEELYLYGNKLASLPSQI-GYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLN 183
           H+E +      L  +P +I  Y  +L  L L  N L  LP+    L +LR L L  N++ 
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 184 ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVT 243
            LP  +     L  L +  N I  +   I +   L +     N +  LP    EL+NL  
Sbjct: 73  RLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTC 132

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L +    L+ LP+ IGN   L +L+L+ N L  +PD L  L  L  L L  N + ++PE+
Sbjct: 133 LSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES 192

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           +    HL +  ++G  LS LP         I N+                   ++  ++ 
Sbjct: 193 IGALFHLKDLWLDGNQLSELPQ-------EIGNLK------------------NLLCLDV 227

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
             N+++++P  I S   +L+ + +  NLL ++P  +G    L+ L +  N++++L E + 
Sbjct: 228 SENRLERLPEEI-SGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLAQLPEAVG 286

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           +  +L  LVL+ N L  LP SIG L+KL  L+ + NKL SLP EIG    L    ++ N+
Sbjct: 287 DCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCGLTVFCVRDNR 346

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L  +P  +   T L  L V  N L  +P  + TL+ L  L+L+DN
Sbjct: 347 LTRIPAEVSQATELHVLDVAGNRLLHLPLSLTTLK-LKALWLSDN 390



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 166/349 (47%), Gaps = 56/349 (16%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L ELP++      L  L L  NE+  +P  + N + L  L +S N + 
Sbjct: 36  RSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIP 95

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQ 354
            +PE++S C  L   +  G  L+ LP+    L +LT  S+N+I+L            P  
Sbjct: 96  EIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQ---------SLPEN 146

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
             ++Y                     NL+ + +++NLLT LP  L     L EL+LG N+
Sbjct: 147 IGNLY---------------------NLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           I  L E I  L +L+ L L  N L +LP  IGNL+ L CLD+ EN+LE LP EI  L  L
Sbjct: 186 IYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN-- 532
             L++  N L ++P  IG L  LS L V +N L  +PE +G  E+L  L L +N  L   
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLAQLPEAVGDCESLTELVLTENRLLTLP 305

Query: 533 --------------------NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                               ++P E+  C  L +  + +  L++IP+E+
Sbjct: 306 KSIGKLKKLSNLNADRNKLVSLPKEIGGCCGLTVFCVRDNRLTRIPAEV 354



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 194/393 (49%), Gaps = 31/393 (7%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLA 155
           RC   ++ ++D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LGL+
Sbjct: 9   RCNR-HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLS 67

Query: 156 ENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFN---RIKTVHPDI 212
           +N +  LP  +AN  QL  LD+  N + E+P  +    +L+I     N   R+    P++
Sbjct: 68  DNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPEL 127

Query: 213 QYLS--------------------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLE 252
           Q L+                    NL+ L +R+N +  LP  L +L+ L  LDL +N + 
Sbjct: 128 QNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIY 187

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
            LP+ IG    L  L L  N+L  +P  +GNL NL  L +S NRLE +PE +S    L +
Sbjct: 188 NLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 247

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKI 371
             +    L ++PDG +  L  ++ + + +N+    P   G  +  S+  +    N++  +
Sbjct: 248 LVISQNLLETIPDG-IGKLKKLSILKVDQNRLAQLPEAVGDCE--SLTELVLTENRLLTL 304

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + K LS +N   N L SLP ++G   GLT   +  N+++++  ++     L VL
Sbjct: 305 PKSI-GKLKKLSNLNADRNKLVSLPKEIGGCCGLTVFCVRDNRLTRIPAEVSQATELHVL 363

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
            ++ N L  LP S+  L KLK L L +N+ + L
Sbjct: 364 DVAGNRLLHLPLSLTTL-KLKALWLSDNQSQPL 395


>gi|158333285|ref|YP_001514457.1| hypothetical protein AM1_0055 [Acaryochloris marina MBIC11017]
 gi|158303526|gb|ABW25143.1| leucine-rich repeat-containing protein [Acaryochloris marina
           MBIC11017]
          Length = 407

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 137/431 (31%), Positives = 201/431 (46%), Gaps = 67/431 (15%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            + E +  LDLS   ++ LP S+  L+ L+ LYL  N+L  LP  +G +T L  L LA N
Sbjct: 17  ARLEGVTELDLSDIGLSELPESIGSLSQLKSLYLSENELMRLPKSLGQLTQLQTLDLARN 76

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L  L + L +L QLR LDL  N L ELP  +   + L+ L L  N++  VH        
Sbjct: 77  HLPILTEVLGDLTQLRSLDLMGNALVELPEFIGAFSQLRSLNLVSNQL--VH-------- 126

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
                        +PP +G+LKNL  L L++N +   PKE+G  T L +L++    L  I
Sbjct: 127 -------------IPPSIGKLKNLQELQLSYNPIARWPKELGWLTGLRSLEIASTGLNEI 173

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P    +L  L  L LS+N L+++PE L     L   ++    L  LP  L S        
Sbjct: 174 PPDWKSLQGLESLNLSFNHLQTLPEWLGTWTELRSLDLSFNQLKELPATLGS-------- 225

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
                            F  + S++ + NQ+  +P  I     NL+ +   +N LT LP 
Sbjct: 226 -----------------FIQLTSLDIQSNQLQSLPPQICDLV-NLTSLLAYNNQLTHLPE 267

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
            LG    LT L +  N I +L E I  L NL+ L+ + +  + +P               
Sbjct: 268 ALGGLAALTTLGMAGNSICQLPESIGELQNLKQLIFNLDPDQPVP--------------- 312

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
              L+  P  +   + L++L   + +L SLP  IG LT L  L+V  NNL  +P  +GTL
Sbjct: 313 ---LQVFPAGLRGCRLLEQLTFVACELRSLPHWIGELTQLKSLNVSHNNLTDLPPSLGTL 369

Query: 518 ENLHTLYLNDN 528
           +NL TL L++N
Sbjct: 370 DNLKTLNLSNN 380



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 179/400 (44%), Gaps = 76/400 (19%)

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +A L+ +  LDL    L+ELP  +  L+ LK LYL                        +
Sbjct: 16  VARLEGVTELDLSDIGLSELPESIGSLSQLKSLYLS-----------------------E 52

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP  LG+L  L TLDLA NHL  L + +G+ T L +LDL  N LV +P+ +G   
Sbjct: 53  NELMRLPKSLGQLTQLQTLDLARNHLPILTEVLGDLTQLRSLDLMGNALVELPEFIGAFS 112

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L  N+L  +P ++ K  +L E                        + LS N   
Sbjct: 113 QLRSLNLVSNQLVHIPPSIGKLKNLQE------------------------LQLSYNPIA 148

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P       T + S+      +++IP   +   + L  +N+  N L +LP  LGTW  L
Sbjct: 149 RWPKE-LGWLTGLRSLEIASTGLNEIPPD-WKSLQGLESLNLSFNHLQTLPEWLGTWTEL 206

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L+L  NQ                       LK+LP+++G+  +L  LD++ N+L+SLP
Sbjct: 207 RSLDLSFNQ-----------------------LKELPATLGSFIQLTSLDIQSNQLQSLP 243

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            +I  L  L  L+  +NQL  LP A+G L  L+ L +  N++  +PE IG L+NL  L  
Sbjct: 244 PQICDLVNLTSLLAYNNQLTHLPEALGGLAALTTLGMAGNSICQLPESIGELQNLKQLIF 303

Query: 526 N----DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N        L   P  L  C  L+ ++   C L  +P  I
Sbjct: 304 NLDPDQPVPLQVFPAGLRGCRLLEQLTFVACELRSLPHWI 343



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 144/314 (45%), Gaps = 53/314 (16%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE-------- 156
           +L+L  + + H+PPS+ KL +L+EL L  N +A  P ++G++T L  L +A         
Sbjct: 116 SLNLVSNQLVHIPPSIGKLKNLQELQLSYNPIARWPKELGWLTGLRSLEIASTGLNEIPP 175

Query: 157 ---------------NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
                          N L +LP+ L    +LR LDL  N+L ELP               
Sbjct: 176 DWKSLQGLESLNLSFNHLQTLPEWLGTWTELRSLDLSFNQLKELP--------------- 220

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
                T+   IQ    L+ L ++ N+++ LPP++ +L NL +L   +N L  LP+ +G  
Sbjct: 221 ----ATLGSFIQ----LTSLDIQSNQLQSLPPQICDLVNLTSLLAYNNQLTHLPEALGGL 272

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN-----RLESVPETLSKCVHLNEFNVE 316
             L TL +  N +  +P+ +G L NL +L  + +      L+  P  L  C  L +    
Sbjct: 273 AALTTLGMAGNSICQLPESIGELQNLKQLIFNLDPDQPVPLQVFPAGLRGCRLLEQLTFV 332

Query: 317 GCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIF 376
            C L SLP   +  LT + ++ +S N  T  P    T   ++ ++N  +N +      ++
Sbjct: 333 ACELRSLPH-WIGELTQLKSLNVSHNNLTDLPPSLGT-LDNLKTLNLSNNPLRSELEVLW 390

Query: 377 SRAKNLSKVNMKDN 390
            R  N  K  ++++
Sbjct: 391 ERGPNAIKSYLQNS 404



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 5/137 (3%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+ +L    + +THLP ++  L  L  L + GN +  LP  IG + NL  L    +
Sbjct: 247 CDLVNLTSLLAYNNQLTHLPEALGGLAALTTLGMAGNSICQLPESIGELQNLKQLIFNLD 306

Query: 158 -----SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
                 L   P  L   + L  L     +L  LP  + +LT LK L +  N +  + P +
Sbjct: 307 PDQPVPLQVFPAGLRGCRLLEQLTFVACELRSLPHWIGELTQLKSLNVSHNNLTDLPPSL 366

Query: 213 QYLSNLSMLSMRDNKIR 229
             L NL  L++ +N +R
Sbjct: 367 GTLDNLKTLNLSNNPLR 383


>gi|418702929|ref|ZP_13263821.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410767473|gb|EKR38148.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 328

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/304 (36%), Positives = 173/304 (56%), Gaps = 4/304 (1%)

Query: 252 EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN 311
           ++L K + N   + TLDL  N    +P  +G L NL +L LS N+++++P+ + K   L 
Sbjct: 10  QDLTKALQNPLKVRTLDLSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQ 69

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
              +    L++LP   +  L  +  + L +N+ T  P     Q  ++ S+N  +NQI  I
Sbjct: 70  SLYLPNNQLTTLPQE-IGQLQKLQWLYLPKNQLTTLPQ-EIGQLKNLKSLNLSYNQIKTI 127

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + + L  + + +N LT+LP ++G    L  L+L TN+++ L ++I +L NL+ L
Sbjct: 128 PKKI-EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDL 186

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L +N L  LP+ IG L+ L+ L+L  N+L +L  EI  L+ L+ L L+SNQL + P+ I
Sbjct: 187 YLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEI 246

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
           G L NL  L +G N L ++PE IG L+NL TL L+ N  L  +P E+    NLQ + L+N
Sbjct: 247 GQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQ-LTTLPQEIGQLQNLQELFLNN 305

Query: 552 CPLS 555
             LS
Sbjct: 306 NQLS 309



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/308 (34%), Positives = 166/308 (53%), Gaps = 26/308 (8%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+ + LP E+G+LKNL  L+L+ N ++ +PKEI     L +L L +N+L  +P  
Sbjct: 25  LDLSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQE 84

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L  L  L L  N+L ++P+ + +  +L   N+    + ++P  +             
Sbjct: 85  IGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKI------------- 131

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
                        +   + S+  ++NQ+  +P  I  + +NL  +++  N LT+LP ++G
Sbjct: 132 ------------EKLQKLQSLGLDNNQLTTLPQEI-GQLQNLQSLDLSTNRLTTLPQEIG 178

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L +L L +NQ++ L  +I  L NL+ L L NN L  L   I  L+ LK LDL  N+
Sbjct: 179 HLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQ 238

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L + P EIG LK LQ L L SNQL +LP  IG L NL  L +  N L ++P+EIG L+NL
Sbjct: 239 LTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNL 298

Query: 521 HTLYLNDN 528
             L+LN+N
Sbjct: 299 QELFLNNN 306



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 111/315 (35%), Positives = 166/315 (52%), Gaps = 26/315 (8%)

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           ++ L L  NR KT+  +I  L NL  L++  N+I+ +P E+ +L+ L +L L +N L  L
Sbjct: 22  VRTLDLSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTL 81

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P+EIG    L  L L  N+L  +P  +G L NL  L LSYN+++++P+ + K   L    
Sbjct: 82  PQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLG 141

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           ++   L++LP  +   L ++ ++ LS N+ T  P                          
Sbjct: 142 LDNNQLTTLPQEI-GQLQNLQSLDLSTNRLTTLPQE------------------------ 176

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
                +NL  + +  N LT LP ++G    L  LNL  N+++ LS++I+ L NL+ L L 
Sbjct: 177 -IGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLR 235

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
           +N L   P  IG L+ L+ LDL  N+L +LP  IG LK LQ L L SNQL +LP+ IG L
Sbjct: 236 SNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQL 295

Query: 495 TNLSYLSVGENNLQS 509
            NL  L +  N L S
Sbjct: 296 QNLQELFLNNNQLSS 310



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 107/311 (34%), Positives = 166/311 (53%), Gaps = 26/311 (8%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS +    LP  + +L +L +L L  N++ ++P +I  +  L  L L  N LT+LP  
Sbjct: 25  LDLSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQE 84

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L+ L L  N+L  LP  + +L +LK L L +N+IKT+   I+ L  L  L + +
Sbjct: 85  IGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDN 144

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+L+NL +LDL+ N L  LP+EIG+   L  L L  N+L  +P+ +G L 
Sbjct: 145 NQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLK 204

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  NRL     TLSK +                      L ++ ++ L  N+ T
Sbjct: 205 NLQTLNLRNNRL----TTLSKEIE--------------------QLQNLKSLDLRSNQLT 240

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P     Q  ++  ++   NQ+  +P GI  + KNL  +++  N LT+LP ++G    L
Sbjct: 241 TFPK-EIGQLKNLQVLDLGSNQLTTLPEGI-GQLKNLQTLDLDSNQLTTLPQEIGQLQNL 298

Query: 406 TELNLGTNQIS 416
            EL L  NQ+S
Sbjct: 299 QELFLNNNQLS 309



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 87/212 (41%), Positives = 126/212 (59%), Gaps = 5/212 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L+LS + I  +P  +EKL  L+ L L  N+L +LP +IG + NL  L L+ N LT
Sbjct: 112 KNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLT 171

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  + +LQ L+ L L  N+L  LP  + +L +L+ L LR NR+ T+  +I+ L NL  
Sbjct: 172 TLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKS 231

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +R N++   P E+G+LKNL  LDL  N L  LP+ IG    L TLDL  N+L  +P  
Sbjct: 232 LDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 291

Query: 281 LGNLINLTRLRLSYNRLES-----VPETLSKC 307
           +G L NL  L L+ N+L S     + + L KC
Sbjct: 292 IGQLQNLQELFLNNNQLSSQEKKRIRKLLPKC 323



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 139/249 (55%), Gaps = 1/249 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS + I  +P  +EKL  L+ LYL  N+L +LP +IG +  L  L L +N LT
Sbjct: 43  KNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT 102

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ L+ L+L +N++  +P  + KL  L+ L L  N++ T+  +I  L NL  
Sbjct: 103 TLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQS 162

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G L+NL  L L  N L  LP EIG    L TL+L++N L  +   
Sbjct: 163 LDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKE 222

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  N+L + P+ + +  +L   ++    L++LP+G +  L ++  + L 
Sbjct: 223 IEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEG-IGQLKNLQTLDLD 281

Query: 341 RNKFTAYPS 349
            N+ T  P 
Sbjct: 282 SNQLTTLPQ 290



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 145/248 (58%), Gaps = 1/248 (0%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K + + +L L  + +T LP  + +L  L+ LYL  N+L +LP +IG + NL  L L+ N 
Sbjct: 64  KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQ 123

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           + ++P  +  LQ+L+ L L +N+L  LP  + +L +L+ L L  NR+ T+  +I +L NL
Sbjct: 124 IKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNL 183

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L +  N++  LP E+G+LKNL TL+L +N L  L KEI     L +LDL+ N+L   P
Sbjct: 184 QDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFP 243

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L NL  L L  N+L ++PE + +  +L   +++   L++LP   +  L ++  + 
Sbjct: 244 KEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE-IGQLQNLQELF 302

Query: 339 LSRNKFTA 346
           L+ N+ ++
Sbjct: 303 LNNNQLSS 310



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 98/172 (56%), Gaps = 11/172 (6%)

Query: 400 GTWVGLTE----------LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
           GT+  LT+          L+L  N+   L ++I  L NL  L LS N +K +P  I  L+
Sbjct: 7   GTYQDLTKALQNPLKVRTLDLSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQ 66

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
           KL+ L L  N+L +LP EIG L++LQ L L  NQL +LP+ IG L NL  L++  N +++
Sbjct: 67  KLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKT 126

Query: 510 IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           IP++I  L+ L +L L DN  L  +P E+    NLQ + L    L+ +P EI
Sbjct: 127 IPKKIEKLQKLQSLGL-DNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 177


>gi|418709217|ref|ZP_13270011.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770553|gb|EKR45772.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 412

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 186/360 (51%), Gaps = 53/360 (14%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           LP  + KL +L++L+L  N+L +LP +IG + NL  L L EN LT++P  +  LQ L+ L
Sbjct: 73  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 132

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           +L HN+L  LP  + +L  L+ LYL  N+  ++  +I  L NL  L +  N++  LP E+
Sbjct: 133 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 192

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI------------------ 277
           G+L+NL +L L HN L  LPKEIG    L  L L++N+L  +                  
Sbjct: 193 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 252

Query: 278 -----PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
                P  +G L NL +L+L  N+L ++P+ + +  +L E +++G  L +LP+  +  L 
Sbjct: 253 KLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPEN-IGQLQ 311

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            +  + L  N+    P+    Q  ++ S++ EHNQ                        L
Sbjct: 312 RLQTLYLGNNQLNVLPN-KLEQLQNLESLDLEHNQ------------------------L 346

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS-SIGNLRKL 451
            +LP ++G    L  LNL  NQ++ L E+I+ L NL+ L L NN    LPS  I  +RKL
Sbjct: 347 NALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN---PLPSEKIERIRKL 403



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 133/386 (34%), Positives = 210/386 (54%), Gaps = 26/386 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS S +T LP  + KL +L+ L L  N+L +LP +IG + NL  L L++N L 
Sbjct: 35  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 94

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ L+ L L  N+L  +P  + +L +L+ L L  N++ T+  DI+ L  L  
Sbjct: 95  ALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQT 154

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+   +  E+G+L+NL +L L HN L  LPKEIG    L +L L HN+L  +P  
Sbjct: 155 LYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKE 214

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N+L ++P+ + +  +L +  +    L++LP   +  L ++  + L 
Sbjct: 215 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKE-IGQLQNLQKLKLY 273

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P                             + +NL ++++  N L +LP ++G
Sbjct: 274 ENQLTTLPKE-------------------------IGQLQNLQELDLDGNQLITLPENIG 308

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L LG NQ++ L   ++ L NLE L L +N L  LP  IG L+KL+ L+L+ N+
Sbjct: 309 QLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQ 368

Query: 461 LESLPNEIGFLKELQRLILQSNQLVS 486
           L +LP EI  LK L++L L +N L S
Sbjct: 369 LATLPEEIKQLKNLKKLYLHNNPLPS 394



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 134/381 (35%), Positives = 204/381 (53%), Gaps = 26/381 (6%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L G+KL +LP +IG + NL  L L +N L +LP  +  LQ L+ L L  N+L  LP  
Sbjct: 40  LNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMALPEE 99

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +L+ L L  N++  +  +I  L NL  L++  N++  LP ++ +L+ L TL L H
Sbjct: 100 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 159

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N    + KEIG    L +L L HN+L  +P  +G L NL  L L +N+L  +P+ + +  
Sbjct: 160 NQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQ 219

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L   ++    L++LP  +   L ++  + L++NK T  P                    
Sbjct: 220 NLQILHLRNNQLTTLPKEI-GQLQNLQKLLLNKNKLTTLPKE------------------ 260

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
                    + +NL K+ + +N LT+LP ++G    L EL+L  NQ+  L E+I  L  L
Sbjct: 261 -------IGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRL 313

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L L NN L  LP+ +  L+ L+ LDLE N+L +LP EIG L++LQ L L+ NQL +LP
Sbjct: 314 QTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLP 373

Query: 489 RAIGHLTNLSYLSVGENNLQS 509
             I  L NL  L +  N L S
Sbjct: 374 EEIKQLKNLKKLYLHNNPLPS 394



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 127/368 (34%), Positives = 209/368 (56%), Gaps = 3/368 (0%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++ + L N Q +R+L+L  +KL  LP  + KL +L++L L  N++  +  +I  L NL  
Sbjct: 26  NITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQ 85

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+L+NL  L L  N L  +PKEIG    L  L+L HN+L  +P+ 
Sbjct: 86  LHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPED 145

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  L  L L +N+  S+ + + +  +L    ++   L+ LP  +   L ++ ++ L 
Sbjct: 146 IEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI-GQLRNLESLGLD 204

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+    P     Q  ++  ++  +NQ+  +P  I  + +NL K+ +  N LT+LP ++G
Sbjct: 205 HNQLNVLPKE-IGQLQNLQILHLRNNQLTTLPKEI-GQLQNLQKLLLNKNKLTTLPKEIG 262

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L +L L  NQ++ L ++I  L NL+ L L  N L  LP +IG L++L+ L L  N+
Sbjct: 263 QLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQ 322

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L  LPN++  L+ L+ L L+ NQL +LP+ IG L  L  L++  N L ++PEEI  L+NL
Sbjct: 323 LNVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 382

Query: 521 HTLYLNDN 528
             LYL++N
Sbjct: 383 KKLYLHNN 390



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 128/363 (35%), Positives = 199/363 (54%), Gaps = 31/363 (8%)

Query: 203 NRIKTVHPDIQYL----SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
           N ++T + +I  +     N+ +L++  +K+  LP E+G+L+NL  L+L  N L  LPKEI
Sbjct: 18  NEVQTYYRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEI 77

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
           G    L  L L  N+L+ +P+ +G L NL +L+L  N+L ++P+ + +  +L E N+   
Sbjct: 78  GKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHN 137

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
            L++LP+ +                          Q   + ++   HNQ + I   I  +
Sbjct: 138 QLATLPEDI-------------------------EQLQRLQTLYLGHNQFNSILKEI-GQ 171

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
            +NL  + +  N L  LP ++G    L  L L  NQ++ L ++I  L NL++L L NN L
Sbjct: 172 LQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQL 231

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
             LP  IG L+ L+ L L +NKL +LP EIG L+ LQ+L L  NQL +LP+ IG L NL 
Sbjct: 232 TTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQ 291

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N L ++PE IG L+ L TLYL +N  LN +P +L    NL+ + L++  L+ +P
Sbjct: 292 ELDLDGNQLITLPENIGQLQRLQTLYLGNNQ-LNVLPNKLEQLQNLESLDLEHNQLNALP 350

Query: 559 SEI 561
            EI
Sbjct: 351 KEI 353


>gi|344278808|ref|XP_003411184.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 7-like [Loxodonta africana]
          Length = 1540

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 205/443 (46%), Gaps = 50/443 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 17  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSI 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L+SLP ++A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 77  PDNDLSSLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 136

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 196

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+ +P                        G +  L  +
Sbjct: 197 SELPEVLDQIQNLRELWMDNNALQVLP------------------------GSIGKLKML 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N+              + +++ E            S  + L  + +  N+L  
Sbjct: 233 VYLDMSKNR--------------IETVDME-----------ISGCEALEDLLLSSNMLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    LT L +  NQ++ L   I NL  LE    S N L+ LPS++G L  L+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTVGYLHSLRTL 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            ++EN L  LP EIG  K +  + L+SN+L  LP  IG +  L  L++ +N L+++P   
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFE 537
             L+ L  L+L+DN     IP +
Sbjct: 388 TKLKELAALWLSDNQSKALIPLQ 410



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 193/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 24  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSS 83

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 144 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 201

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 202 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  +I     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 238 SKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 297

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  +G+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 298 LSLLEEFDCSCNELESLPSTVGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 356

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 357 LEFLPEEIGQMQKLRVLNLSDNRLKNLP 384



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 175/368 (47%), Gaps = 51/368 (13%)

Query: 218 LSMLSMRDNKIRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           +S+L      ++++P E+    + L  L L  N +EELPK++ NC  L  L +  N+L +
Sbjct: 24  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSS 83

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  + +L+NL  L +S N ++  PE +  C  L         +S LPDG          
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF--------- 134

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
                           TQ  ++  +      ++ +P   F R   L  + +++N L +LP
Sbjct: 135 ----------------TQLLNLTQLYLNDAFLEFLPAN-FGRLVKLRILELRENHLKTLP 177

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +     L  L+LG N+ S+L E +  + NL  L + NN L+ LP SIG L+ L  LD+
Sbjct: 178 KSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 457 EENKLES-----------------------LPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
            +N++E+                       LP+ IG LK+L  L +  NQL  LP  IG+
Sbjct: 238 SKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 297

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L+ L       N L+S+P  +G L +L TL +++N  L  +P E+  C N+ +MSL +  
Sbjct: 298 LSLLEEFDCSCNELESLPSTVGYLHSLRTLAVDEN-FLPELPREIGSCKNVTVMSLRSNK 356

Query: 554 LSQIPSEI 561
           L  +P EI
Sbjct: 357 LEFLPEEI 364



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 180/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 93  NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 152

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 153 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLREL 212

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  EI  C  L  L L  N L  +PD +
Sbjct: 213 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSI 272

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 273 GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS---------------- 316

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                             ++ + H               +L  + + +N L  LP ++G+
Sbjct: 317 ------------------TVGYLH---------------SLRTLAVDENFLPELPREIGS 343

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 344 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 403

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 404 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 433


>gi|456824532|gb|EMF72958.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 423

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 132/381 (34%), Positives = 200/381 (52%), Gaps = 26/381 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           +I NLDLS   +  LP  + +L +L++L L GN+   L  +I  + +L  L L  N LT 
Sbjct: 42  DIRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTV 101

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  LQ L+ L L  N+L  LP  + +  +L+ L L  N++  +  +I  L NL  L
Sbjct: 102 LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQEL 161

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           S+  NK+  LP E+ +LK+L  LDL HN L  + KE+     L  LDL+ N+L  IP  +
Sbjct: 162 SLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEI 221

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L +L  L L+ N+L S+P+ + +  +L   N                        L  
Sbjct: 222 RQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLN------------------------LGE 257

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P         +    + +NQ+ + P  +  + K+L  +++  N +T+LP+++  
Sbjct: 258 NRFQIFPVEILELKNLLELNLY-YNQLVEFPKEV-GQLKSLKYLSLYHNQITTLPVEVTQ 315

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L EL+L  N+I+ L ++I  L NLE L LSNN L  LP  IG L+KL+ L+L  N+L
Sbjct: 316 LPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQL 375

Query: 462 ESLPNEIGFLKELQRLILQSN 482
            +LP EI  LK LQRL L SN
Sbjct: 376 TTLPKEIEQLKNLQRLELDSN 396



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 128/358 (35%), Positives = 191/358 (53%), Gaps = 4/358 (1%)

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L L F  +KT+   I  L NL  L +  N+   L  E+ +LK+L  L+L +N L  LPKE
Sbjct: 46  LDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKE 105

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           IG    L  L L  NELVN+P  +G   NL +L L  N+L  +P+ + +  +L E ++  
Sbjct: 106 IGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLS 165

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             L SLP  +   L S+ N+ L+ N+ T   S       ++ +++   N++  IP  I  
Sbjct: 166 NKLISLPTEI-EQLKSLKNLDLNHNELTTV-SKEVMLLETLENLDLRSNKLKTIPKEI-R 222

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           + K+L  + +  N LTSLP ++     L  LNLG N+      +I  L NL  L L  N 
Sbjct: 223 QLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQ 282

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L + P  +G L+ LK L L  N++ +LP E+  L +LQ L L  N++  LP+ I  L NL
Sbjct: 283 LVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNL 342

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            +LS+  N L ++P+EIG L+ L  L L +N  L  +P E+    NLQ + LD+ P+S
Sbjct: 343 EWLSLSNNKLNALPKEIGQLKKLQRLELGNNQ-LTTLPKEIEQLKNLQRLELDSNPIS 399



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 124/370 (33%), Positives = 191/370 (51%), Gaps = 26/370 (7%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L +LP++IG + NL  L L  N  T L   +  L+ L+ L+L +NKL  LP  + +L +L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           + L L  N +  +  +I    NL  L++ +NK+  LP E+G+L+NL  L L  N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
            EI     L  LDL HNEL  +   +  L  L  L L  N+L+++P+ + +   L    +
Sbjct: 173 TEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
            G  L+SLP  +   L ++  + L  N+F  +P         +    + +NQ+ + P  +
Sbjct: 233 TGNQLTSLPKEI-EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY-YNQLVEFPKEV 290

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             + K+L  +++  N +T+LP+++     L EL+L  N+I+ L ++I  L NLE L LSN
Sbjct: 291 -GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSN 349

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N                       KL +LP EIG LK+LQRL L +NQL +LP+ I  L 
Sbjct: 350 N-----------------------KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK 386

Query: 496 NLSYLSVGEN 505
           NL  L +  N
Sbjct: 387 NLQRLELDSN 396



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 161/290 (55%), Gaps = 3/290 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L  + + +LP  + +  +L++L L  NKL  LP +IG + NL  L L  N L 
Sbjct: 110 QNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLI 169

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP  +  L+ L+ LDL HN+L  +   V  L +L+ L LR N++KT+  +I+ L +L +
Sbjct: 170 SLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKV 229

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+ +L+NL TL+L  N  +  P EI     L+ L+L +N+LV  P  
Sbjct: 230 LMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKE 289

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L +L  L L +N++ ++P  +++   L E ++ G  ++ LP  +L  L ++  ++LS
Sbjct: 290 VGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEIL-QLKNLEWLSLS 348

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
            NK  A P     Q   +  +   +NQ+  +P  I  + KNL ++ +  N
Sbjct: 349 NNKLNALPK-EIGQLKKLQRLELGNNQLTTLPKEI-EQLKNLQRLELDSN 396



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 185/356 (51%), Gaps = 27/356 (7%)

Query: 206 KTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
           K +   +Q  +++  L +    ++ LP ++G+LKNL  LDL  N    L KEI     L 
Sbjct: 31  KNLAKALQNPADIRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
            L+L +N+L  +P  +G L NL  L L  N L ++P+ + +  +L + N++   L+ LP 
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPK 150

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
            +   L ++  ++L  NK  + P+    Q  S+ +++  HN+                  
Sbjct: 151 EI-GQLQNLQELSLLSNKLISLPTE-IEQLKSLKNLDLNHNE------------------ 190

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
                 LT++  ++     L  L+L +N++  + ++I+ L +L+VL+L+ N L  LP  I
Sbjct: 191 ------LTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
             L+ LK L+L EN+ +  P EI  LK L  L L  NQLV  P+ +G L +L YLS+  N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 506 NLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            + ++P E+  L +L  L+L+ N  +  +P E+    NL+ +SL N  L+ +P EI
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGNK-ITILPKEILQLKNLEWLSLSNNKLNALPKEI 359



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 187/360 (51%), Gaps = 8/360 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  +  T L   + +L  L++L L  NKL  LP +IG + NL  L L  N L 
Sbjct: 64  KNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELV 123

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +   + L+ L+L +NKL  LP  + +L +L+ L L  N++ ++  +I+ L +L  
Sbjct: 124 NLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKN 183

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  +  E+  L+ L  LDL  N L+ +PKEI     L  L L  N+L ++P  
Sbjct: 184 LDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKE 243

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  NR +  P  + +  +L E N+    L   P   +  L S+  ++L 
Sbjct: 244 IEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKE-VGQLKSLKYLSLY 302

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P    TQ   +  ++   N+I  +P  I  + KNL  +++ +N L +LP ++G
Sbjct: 303 HNQITTLPV-EVTQLPDLQELHLSGNKITILPKEIL-QLKNLEWLSLSNNKLNALPKEIG 360

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL--KC-LDLE 457
               L  L LG NQ++ L ++I+ L NL+ L L +N +   P     +RKL  KC +D E
Sbjct: 361 QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKLLPKCEIDFE 418



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 157/310 (50%), Gaps = 27/310 (8%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           N+   L N  ++  L LS+  L+++P  + +  +L + ++ G   + L   +   L  + 
Sbjct: 32  NLAKALQNPADIRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQ-LKDLQ 90

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + L+ NK T  P     Q  ++  ++   N++  +P  I  + KNL K+N+ +N LT L
Sbjct: 91  KLNLNNNKLTVLPKE-IGQLQNLQELSLHSNELVNLPKEI-GQFKNLQKLNLDNNKLTVL 148

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L EL+L +N++  L  +I+ L +L+ L L++N L  +   +  L  L+ LD
Sbjct: 149 PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLD 208

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ------- 508
           L  NKL+++P EI  LK L+ L+L  NQL SLP+ I  L NL  L++GEN  Q       
Sbjct: 209 LRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEIL 268

Query: 509 ----------------SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                             P+E+G L++L  L L  N  +  +P E+    +LQ + L   
Sbjct: 269 ELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ-ITTLPVEVTQLPDLQELHLSGN 327

Query: 553 PLSQIPSEIV 562
            ++ +P EI+
Sbjct: 328 KITILPKEIL 337



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 121/243 (49%), Gaps = 32/243 (13%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           NLDL+ + +T +   V  L  LE L L  NKL ++P +I  + +L  L L  N LTSLP 
Sbjct: 183 NLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPK 242

Query: 165 SLANLQQLRVLDL-----------------------RHNKLNELPMVVYKLTSLKILYLR 201
            +  LQ L+ L+L                        +N+L E P  V +L SLK L L 
Sbjct: 243 EIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLY 302

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N+I T+  ++  L +L  L +  NKI  LP E+ +LKNL  L L++N L  LPKEIG  
Sbjct: 303 HNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL-----ESVPETLSKCVHLNEFNVE 316
             L  L+L +N+L  +P  +  L NL RL L  N +     E + + L KC    E + E
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISPKEKERIRKLLPKC----EIDFE 418

Query: 317 GCA 319
           G  
Sbjct: 419 GGG 421


>gi|428186142|gb|EKX54993.1| hypothetical protein GUITHDRAFT_62926 [Guillardia theta CCMP2712]
          Length = 495

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 214/409 (52%), Gaps = 6/409 (1%)

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
           L +L+E+ L  N +  LP+ I  +  L  L  + N + +LP S+ NL  L+ LDL  N L
Sbjct: 34  LKYLQEVVLDHNNIQILPAVISQMPCLESLNASANLIQTLPASVGNLISLKSLDLSKNGL 93

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
             +   +  L +L+ L L  N I  V   I  L +L   S+  N + +LP  L +L  L 
Sbjct: 94  VAIHEEISNLVNLEQLKLHENEITEVPECISALQSLKEFSLSQNNLVQLPNSLPQLTGLK 153

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            L +A N+L E+P  I     L  L L  N +  +P  LG L NLT L L+YN+L+++P+
Sbjct: 154 NLLVAKNNLSEIPDLIFKIQTLTKLILVENHITKVPKELGLLTNLTDLVLTYNKLKTLPK 213

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP--SGGPTQFTSVYS 360
            + +   L+   ++   ++ LPD  +  LTS+  ++ + N+ T +P   G  TQ   +  
Sbjct: 214 EIGELWKLDYLVLDENMITELPDS-IEHLTSLKELSFNDNRITRFPLSLGALTQL-EILE 271

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
           ++   N+I ++   +F +   L+ +N+  N L  +P  +     L   + G+N I  +  
Sbjct: 272 LSLSENRISRMHPALF-KLTQLTILNLNSNRLQKIPESIRNLEQLVTFSCGSNFIEDIPP 330

Query: 421 DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE-IGFLKELQRLIL 479
           +I  L NL  LVL  N ++ +   +G L  L+ L L +N+L  +P + +  L  L+ L L
Sbjct: 331 EICELDNLRQLVLFGNNIRHVCPELGGLTGLEVLSLSQNQLTDIPKQMLKTLTNLKELWL 390

Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
             N L S+P +IG+L +L  L + +N L+S+P +IG+L+NL+ L L  N
Sbjct: 391 AFNHLHSIPSSIGYLKHLEQLWLQDNELESLPPQIGSLKNLNVLTLTGN 439



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 135/417 (32%), Positives = 209/417 (50%), Gaps = 29/417 (6%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +L+ S + I  LP SV  L  L+ L L  N L ++  +I  + NL  L L EN +T +P+
Sbjct: 62  SLNASANLIQTLPASVGNLISLKSLDLSKNGLVAIHEEISNLVNLEQLKLHENEITEVPE 121

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY-LSNLSMLSM 223
            ++ LQ L+   L  N L +LP  + +LT LK L +  N +  + PD+ + +  L+ L +
Sbjct: 122 CISALQSLKEFSLSQNNLVQLPNSLPQLTGLKNLLVAKNNLSEI-PDLIFKIQTLTKLIL 180

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
            +N I ++P ELG L NL  L L +N L+ LPKEIG    L  L L  N +  +PD + +
Sbjct: 181 VENHITKVPKELGLLTNLTDLVLTYNKLKTLPKEIGELWKLDYLVLDENMITELPDSIEH 240

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L +L  L  + NR+   P +L     L                       I  ++LS N+
Sbjct: 241 LTSLKELSFNDNRITRFPLSLGALTQL----------------------EILELSLSENR 278

Query: 344 FT-AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
            +  +P+    + T +  +N   N++ KIP  I    + L   +   N +  +P ++   
Sbjct: 279 ISRMHPA--LFKLTQLTILNLNSNRLQKIPESI-RNLEQLVTFSCGSNFIEDIPPEICEL 335

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS-IGNLRKLKCLDLEENKL 461
             L +L L  N I  +  ++  L  LEVL LS N L  +P   +  L  LK L L  N L
Sbjct: 336 DNLRQLVLFGNNIRHVCPELGGLTGLEVLSLSQNQLTDIPKQMLKTLTNLKELWLAFNHL 395

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
            S+P+ IG+LK L++L LQ N+L SLP  IG L NL+ L++  N +  +P+ +  LE
Sbjct: 396 HSIPSSIGYLKHLEQLWLQDNELESLPPQIGSLKNLNVLTLTGNRISELPDSLKRLE 452



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 222/452 (49%), Gaps = 7/452 (1%)

Query: 112 SITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQ 171
            +   PP  E +T L   + Y        +  G +  L  + L  N++  LP  ++ +  
Sbjct: 2   GLRQFPP--ELVTALSSFWEYSEARGVFLTGEGNLKYLQEVVLDHNNIQILPAVISQMPC 59

Query: 172 LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
           L  L+   N +  LP  V  L SLK L L  N +  +H +I  L NL  L + +N+I E+
Sbjct: 60  LESLNASANLIQTLPASVGNLISLKSLDLSKNGLVAIHEEISNLVNLEQLKLHENEITEV 119

Query: 232 PPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLR 291
           P  +  L++L    L+ N+L +LP  +   T L  L +  N L  IPD++  +  LT+L 
Sbjct: 120 PECISALQSLKEFSLSQNNLVQLPNSLPQLTGLKNLLVAKNNLSEIPDLIFKIQTLTKLI 179

Query: 292 LSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGG 351
           L  N +  VP+ L    +L +  +    L +LP   +  L  ++ + L  N  T  P   
Sbjct: 180 LVENHITKVPKELGLLTNLTDLVLTYNKLKTLPKE-IGELWKLDYLVLDENMITELPD-S 237

Query: 352 PTQFTSVYSINFEHNQIDKIPYGIFSRAK-NLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
               TS+  ++F  N+I + P  + +  +  + ++++ +N ++ +   L     LT LNL
Sbjct: 238 IEHLTSLKELSFNDNRITRFPLSLGALTQLEILELSLSENRISRMHPALFKLTQLTILNL 297

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
            +N++ K+ E I+NL  L      +N ++ +P  I  L  L+ L L  N +  +  E+G 
Sbjct: 298 NSNRLQKIPESIRNLEQLVTFSCGSNFIEDIPPEICELDNLRQLVLFGNNIRHVCPELGG 357

Query: 471 LKELQRLILQSNQLVSLPRA-IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
           L  L+ L L  NQL  +P+  +  LTNL  L +  N+L SIP  IG L++L  L+L DN 
Sbjct: 358 LTGLEVLSLSQNQLTDIPKQMLKTLTNLKELWLAFNHLHSIPSSIGYLKHLEQLWLQDNE 417

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L ++P ++    NL +++L    +S++P  +
Sbjct: 418 -LESLPPQIGSLKNLNVLTLTGNRISELPDSL 448



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 145/276 (52%), Gaps = 27/276 (9%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K + +  L L ++ IT +P  +  LT+L +L L  NKL +LP +IG +  L  L L EN 
Sbjct: 171 KIQTLTKLILVENHITKVPKELGLLTNLTDLVLTYNKLKTLPKEIGELWKLDYLVLDENM 230

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF--NRIKTVHPDIQYLS 216
           +T LPDS+ +L  L+ L    N++   P+ +  LT L+IL L    NRI  +HP +  L+
Sbjct: 231 ITELPDSIEHLTSLKELSFNDNRITRFPLSLGALTQLEILELSLSENRISRMHPALFKLT 290

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI------------------ 258
            L++L++  N+++++P  +  L+ LVT     N +E++P EI                  
Sbjct: 291 QLTILNLNSNRLQKIPESIRNLEQLVTFSCGSNFIEDIPPEICELDNLRQLVLFGNNIRH 350

Query: 259 -----GNCTMLVTLDLQHNELVNIP-DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
                G  T L  L L  N+L +IP  ML  L NL  L L++N L S+P ++    HL +
Sbjct: 351 VCPELGGLTGLEVLSLSQNQLTDIPKQMLKTLTNLKELWLAFNHLHSIPSSIGYLKHLEQ 410

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
             ++   L SLP   + SL ++N +TL+ N+ +  P
Sbjct: 411 LWLQDNELESLPPQ-IGSLKNLNVLTLTGNRISELP 445



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 24/143 (16%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQ-IGYVTNLTCLGLAE 156
           C+ +N+  L L  ++I H+ P +  LT LE L L  N+L  +P Q +  +TNL  L LA 
Sbjct: 333 CELDNLRQLVLFGNNIRHVCPELGGLTGLEVLSLSQNQLTDIPKQMLKTLTNLKELWLAF 392

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N L S+P S+  L+ L  L L+ N+L  LP                       P I  L 
Sbjct: 393 NHLHSIPSSIGYLKHLEQLWLQDNELESLP-----------------------PQIGSLK 429

Query: 217 NLSMLSMRDNKIRELPPELGELK 239
           NL++L++  N+I ELP  L  L+
Sbjct: 430 NLNVLTLTGNRISELPDSLKRLE 452



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           +I K+ L+    N+  L L+ + +  +P S+  L HLE+L+L  N+L SLP QIG + NL
Sbjct: 373 DIPKQMLKTLT-NLKELWLAFNHLHSIPSSIGYLKHLEQLWLQDNELESLPPQIGSLKNL 431

Query: 150 TCLGLAENSLTSLPDSLANLQ 170
             L L  N ++ LPDSL  L+
Sbjct: 432 NVLTLTGNRISELPDSLKRLE 452


>gi|195036246|ref|XP_001989582.1| GH18723 [Drosophila grimshawi]
 gi|193893778|gb|EDV92644.1| GH18723 [Drosophila grimshawi]
          Length = 1864

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 178/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 SLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP E+G    L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEMGGLVSLTDLDLAQNLLETLPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T ++N+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCDNMQELILTENFLSELP-ASIGRMTKLSNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 196/385 (50%), Gaps = 16/385 (4%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L S+P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTSLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGP--TQFTSVYSINFEHNQIDKIP--YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
              P       ++ +  +HNQ+ ++P   G+ ++   L+ +++ +N L  LP ++G  V 
Sbjct: 192 ---PYLGYLPGLHELWLDHNQLQRLPPELGLLTK---LTYLDVSENRLEELPNEMGGLVS 245

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LT+L+L  N +  L + I  L  L +L L  N L++L  ++GN   ++ L L EN L  L
Sbjct: 246 LTDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCDNMQELILTENFLSEL 305

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P  IG + +L  L +  N L  LP  IG  +NL  LS+ +N L+ +P E+G    LH L 
Sbjct: 306 PASIGRMTKLSNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLD 365

Query: 525 LNDNTCLNNIPFELALCSNLQIMSL 549
           ++ N  L  +P+ L    NLQ+ ++
Sbjct: 366 VSGNQLL-YLPYSLV---NLQLKAV 386



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 190/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + ++  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTSLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +   V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEMGGLVSLTDLDLAQNLLETLPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++         N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCDNMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L+ LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGRMTKLSNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 158/361 (43%), Gaps = 51/361 (14%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           + L  L L  NH+ +LPK       L  L L  NE+  +P  + N  NL  L +S N + 
Sbjct: 37  RTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIP 96

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
            +P+ +     L   +     +  LP G  S L ++  + L+    T+ P+         
Sbjct: 97  DIPDDIKHLQSLQVADFSSNPIPKLPSGF-SQLKNLTVLGLNDMSLTSLPAD-------- 147

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
                            F     L  + +++NLL  LP  +     L  L+LG N+I  L
Sbjct: 148 -----------------FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDL 190

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
              +  L  L  L L +N L++LP  +G L KL  LD+ EN+LE LPNE+G L  L  L 
Sbjct: 191 PPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEMGGLVSLTDLD 250

Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN---------- 528
           L  N L +LP  I  L+ L+ L + +N LQ + + +G  +N+  L L +N          
Sbjct: 251 LAQNLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCDNMQELILTENFLSELPASIG 310

Query: 529 ------------TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
                         L  +P E+  CSNL ++SL +  L ++P E+   G   ++  L + 
Sbjct: 311 RMTKLSNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPEL---GNCTVLHVLDVS 367

Query: 577 G 577
           G
Sbjct: 368 G 368


>gi|198415792|ref|XP_002126526.1| PREDICTED: similar to Leucine-rich repeat-containing protein 40
           [Ciona intestinalis]
          Length = 815

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 240/496 (48%), Gaps = 40/496 (8%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           NI  ++LS + ++ LP  ++KL  L  + + GN L SLP+ IG +  L  L  + N++  
Sbjct: 207 NISQINLSDNKLSKLPEDIDKLQRLTHINVSGNHLQSLPTAIGSLKYLHHLDASSNNIKV 266

Query: 162 LPDSLANLQ-QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            P S+ +L   L  L+L +N L  +P  +  L  L++  L FN+++T+  D+  L +L  
Sbjct: 267 FPQSVYSLGFSLTSLNLTNNSLESIPDGIGSLKRLRVFMLSFNKLQTLPNDMNGLVSLQQ 326

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N +  L P +G L +L TLD ++N +  LP E+     L  L+L +N+L ++P  
Sbjct: 327 LHVSNNNLTNLSPLIG-LLHLETLDASNNKITSLPTEMHTLRWLFILNLANNQLTSLPPS 385

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G++  L +L L  NRLES+P TL +   L   +     L++LPD L     ++  + L+
Sbjct: 386 IGHIKALKQLYLRNNRLESLPSTLGEQQLLQVVDASDNELTNLPDDL-RKWRTLEQLILA 444

Query: 341 RNKFTAYPSG----GPTQFTSVYSINFEHNQIDKIPYGIFSRAK------NLSKVNMKDN 390
           RN+ +  P      G      V   NF  + +      +    +       L  +   DN
Sbjct: 445 RNQLSQIPKSIKYLGMLDKFDVSDNNFVTSPLPDAASKVLRELRLAGNPWRLPPLGGDDN 504

Query: 391 --LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
             L+T +  +L   V  T L+L   ++ +    I N  NL  L L+ N +K +P +IG L
Sbjct: 505 RSLITRIYKELNGIV--TSLDLSRVELEEFPLSICNCRNLRELKLAGNSIKSIPGNIGRL 562

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
           R L+ LD+  N++  +P +IG L  LQ L + +N L +  + +  L +L  L+   N L 
Sbjct: 563 RLLEILDVSNNQVARIPEQIGILTHLQELHVSNNCLENFAQNLTKLRSLQILNFAGNQLT 622

Query: 509 SIPEEIGTLENLHTLYLNDNTCL-----------------------NNIPFELALCSNLQ 545
            +PE  G L  L ++ L+DN  L                        NIP +L     +Q
Sbjct: 623 QLPENFGELNKLTSMDLSDNQLLELPNDRIDVLASLMTLNISYNRVKNIPTDLPYLYRMQ 682

Query: 546 IMSLDNCPLSQIPSEI 561
           I++L    L  +P +I
Sbjct: 683 IINLSRNDLKLLPIDI 698



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 203/409 (49%), Gaps = 51/409 (12%)

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
           + L    N +  +P S++ LQ L  +D+R+N +  LP  V KL  L  L +  NR+K + 
Sbjct: 71  SVLHAQNNKIKKIPRSISALQSLYEVDMRNNVIGALPASVAKLKKLSSLNVSDNRLKALP 130

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
             I   S L    + +NKI++LP  +G+  N+ +LD++ N ++ LPK I    +  +LD+
Sbjct: 131 KTIHKASGLETCDVSNNKIKKLPKNIGQ-SNMTSLDVSQNSIKILPKSI--YRLPRSLDV 187

Query: 270 QHNELVNIPDML---GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
             N++  +P ++    +  N++++ LS N+L  +PE + K   L   NV G  L SLP  
Sbjct: 188 SGNQIEVLPPIVITKKSKGNISQINLSDNKLSKLPEDIDKLQRLTHINVSGNHLQSLPTA 247

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK------ 380
           +  SL  ++++  S N    +P    +   S+ S+N  +N ++ IP GI S  +      
Sbjct: 248 I-GSLKYLHHLDASSNNIKVFPQSVYSLGFSLTSLNLTNNSLESIPDGIGSLKRLRVFML 306

Query: 381 --------------------------------------NLSKVNMKDNLLTSLPLDLGTW 402
                                                 +L  ++  +N +TSLP ++ T 
Sbjct: 307 SFNKLQTLPNDMNGLVSLQQLHVSNNNLTNLSPLIGLLHLETLDASNNKITSLPTEMHTL 366

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
             L  LNL  NQ++ L   I ++  L+ L L NN L+ LPS++G  + L+ +D  +N+L 
Sbjct: 367 RWLFILNLANNQLTSLPPSIGHIKALKQLYLRNNRLESLPSTLGEQQLLQVVDASDNELT 426

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           +LP+++   + L++LIL  NQL  +P++I +L  L    V +NN  + P
Sbjct: 427 NLPDDLRKWRTLEQLILARNQLSQIPKSIKYLGMLDKFDVSDNNFVTSP 475



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 132/426 (30%), Positives = 192/426 (45%), Gaps = 62/426 (14%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD S + IT LP  +  L  L  L L  N+L SLP  IG++  L  L L  N L SLP +
Sbjct: 349 LDASNNKITSLPTEMHTLRWLFILNLANNQLTSLPPSIGHIKALKQLYLRNNRLESLPST 408

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L   Q L+V+D   N+L  LP  + K  +L+ L L  N++  +   I+YL  L    + D
Sbjct: 409 LGEQQLLQVVDASDNELTNLPDDLRKWRTLEQLILARNQLSQIPKSIKYLGMLDKFDVSD 468

Query: 226 NK-------------IREL---------PPELG------------ELKNLVT-LDLAHNH 250
           N              +REL         PP  G            EL  +VT LDL+   
Sbjct: 469 NNFVTSPLPDAASKVLRELRLAGNPWRLPPLGGDDNRSLITRIYKELNGIVTSLDLSRVE 528

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           LEE P  I NC  L  L L  N + +IP  +G L  L  L +S N++  +PE +    HL
Sbjct: 529 LEEFPLSICNCRNLRELKLAGNSIKSIPGNIGRLRLLEILDVSNNQVARIPEQIGILTHL 588

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK 370
            E +V    L +    L                         T+  S+  +NF  NQ+ +
Sbjct: 589 QELHVSNNCLENFAQNL-------------------------TKLRSLQILNFAGNQLTQ 623

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLD-LGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
           +P   F     L+ +++ DN L  LP D +     L  LN+  N++  +  D+  L  ++
Sbjct: 624 LPEN-FGELNKLTSMDLSDNQLLELPNDRIDVLASLMTLNISYNRVKNIPTDLPYLYRMQ 682

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR 489
           ++ LS N LK LP  I  ++ L  LDL +N +ES+P  I  L  L+ L L  N++   P+
Sbjct: 683 IINLSRNDLKLLPIDIWRMKSLTSLDLTDNLIESIPESIAKLPALKELNLTDNKIKVWPK 742

Query: 490 AIGHLT 495
            +  LT
Sbjct: 743 CMAVLT 748



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 24/211 (11%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN--------- 148
           C   N+  L L+ +SI  +P ++ +L  LE L +  N++A +P QIG +T+         
Sbjct: 537 CNCRNLRELKLAGNSIKSIPGNIGRLRLLEILDVSNNQVARIPEQIGILTHLQELHVSNN 596

Query: 149 --------------LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPM-VVYKLT 193
                         L  L  A N LT LP++   L +L  +DL  N+L ELP   +  L 
Sbjct: 597 CLENFAQNLTKLRSLQILNFAGNQLTQLPENFGELNKLTSMDLSDNQLLELPNDRIDVLA 656

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           SL  L + +NR+K +  D+ YL  + ++++  N ++ LP ++  +K+L +LDL  N +E 
Sbjct: 657 SLMTLNISYNRVKNIPTDLPYLYRMQIINLSRNDLKLLPIDIWRMKSLTSLDLTDNLIES 716

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           +P+ I     L  L+L  N++   P  +  L
Sbjct: 717 IPESIAKLPALKELNLTDNKIKVWPKCMAVL 747



 Score = 45.8 bits (107), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 52/92 (56%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ L++S + + ++P  +  L  ++ + L  N L  LP  I  + +LT L L +N + S+
Sbjct: 658 LMTLNISYNRVKNIPTDLPYLYRMQIINLSRNDLKLLPIDIWRMKSLTSLDLTDNLIESI 717

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
           P+S+A L  L+ L+L  NK+   P  +  LTS
Sbjct: 718 PESIAKLPALKELNLTDNKIKVWPKCMAVLTS 749


>gi|116007092|ref|NP_001014670.2| scribbled, isoform H [Drosophila melanogaster]
 gi|113194844|gb|AAX52995.2| scribbled, isoform H [Drosophila melanogaster]
          Length = 1939

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 211/435 (48%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F  C  + +  +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LG
Sbjct: 8   FKGCNRQ-VEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLG 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  + N + L  LD+  N + ++P  +  L SL++     N I  +     
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL++L + D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + ++P  LG L  L  L L +N+L+ +P  L                     GLL+ LT 
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPEL---------------------GLLTKLTY 225

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           ++   +S N+    P                 N+I     G+ S    L+ +++  NLL 
Sbjct: 226 LD---VSENRLEELP-----------------NEIS----GLVS----LTDLDLAQNLLE 257

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP  +     LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  
Sbjct: 258 ALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNN 317

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+++ N LE LP EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  
Sbjct: 318 LNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYS 377

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  ++L++N
Sbjct: 378 LVNLQ-LKAVWLSEN 391



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|24650332|ref|NP_733154.1| scribbled, isoform A [Drosophila melanogaster]
 gi|386766560|ref|NP_001036761.3| scribbled, isoform B [Drosophila melanogaster]
 gi|23172362|gb|AAN14076.1| scribbled, isoform A [Drosophila melanogaster]
 gi|383292965|gb|ABI31210.3| scribbled, isoform B [Drosophila melanogaster]
          Length = 1756

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 211/435 (48%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F  C  + +  +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LG
Sbjct: 8   FKGCNRQ-VEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLG 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  + N + L  LD+  N + ++P  +  L SL++     N I  +     
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL++L + D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + ++P  LG L  L  L L +N+L+ +P  L                     GLL+ LT 
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPEL---------------------GLLTKLTY 225

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           ++   +S N+    P                 N+I     G+ S    L+ +++  NLL 
Sbjct: 226 LD---VSENRLEELP-----------------NEIS----GLVS----LTDLDLAQNLLE 257

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP  +     LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  
Sbjct: 258 ALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNN 317

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+++ N LE LP EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  
Sbjct: 318 LNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYS 377

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  ++L++N
Sbjct: 378 LVNLQ-LKAVWLSEN 391



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|45656722|ref|YP_000808.1| hypothetical protein LIC10831 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084319|ref|ZP_15545182.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102944|ref|ZP_15563546.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599958|gb|AAS69445.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367259|gb|EKP22645.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433219|gb|EKP77567.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 377

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 126/367 (34%), Positives = 186/367 (50%), Gaps = 49/367 (13%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N  ++RVLDL   +L  LP+ + KL +L+ LYL +N++                
Sbjct: 38  LTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTV-------------- 83

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
                    LP E+ +LKNL  L L  N L  LPKEI     L  LDL  N+L  +P  +
Sbjct: 84  ---------LPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEI 134

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L L  NRL ++ + + +  +L   ++    L++LP+ +   L ++ ++ LS 
Sbjct: 135 EQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEI-EQLKNLKSLYLSE 193

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P                             + +NL  + + +N +T LP ++  
Sbjct: 194 NQFATFPKE-------------------------IGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L L  NQ+  L ++I+ L NL+ L LS N L  LP  +G L  L+ LDL  N+L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
           ++LP EI  LK LQ L L +NQL  LP+ IG L NL +LS+  N L ++P EI  L+NL 
Sbjct: 289 KTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQ 348

Query: 522 TLYLNDN 528
           TLYLN+N
Sbjct: 349 TLYLNNN 355



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/331 (34%), Positives = 180/331 (54%), Gaps = 26/331 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + KL +L+ LYL+ N+L  LP +I  + NL  L L  N LT+LP  
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VLDL  N+L  LP  + +L +L++LYL  NR+ T+  DI+ L NL  L + +
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+ +LKNL +L L+ N     PKEIG    L  L L +N++  +P+ +  L 
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLK 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LS N+L ++P+ + +                        L ++  + LS N+ T
Sbjct: 231 KLQYLYLSDNQLITLPKEIEQ------------------------LKNLQTLDLSYNQLT 266

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++ +++  +NQ+  +P  I  + KNL  + + +N LT LP ++G    L
Sbjct: 267 ILPKEV-GQLENLQTLDLRNNQLKTLPKEI-EQLKNLQTLFLSNNQLTILPQEIGKLKNL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
             L+L  NQ++ L  +I+ L NL+ L L+NN
Sbjct: 325 LWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 153/309 (49%), Gaps = 27/309 (8%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  LDL   EL  +P  +G L NL RL L YN+L  +P+ + +  +L  
Sbjct: 37  DLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQL 96

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
             +    L++LP  +   L ++  + L  N+ T  P                        
Sbjct: 97  LYLRSNRLTTLPKEI-EQLKNLQVLDLGSNQLTVLPQE---------------------- 133

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
                + KNL  + +  N LT+L  D+     L  L+L  NQ++ L  +I+ L NL+ L 
Sbjct: 134 ---IEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 190

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           LS N     P  IG L+ LK L L  N++  LPNEI  LK+LQ L L  NQL++LP+ I 
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIE 250

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L +  N L  +P+E+G LENL TL L +N  L  +P E+    NLQ + L N 
Sbjct: 251 QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLSNN 309

Query: 553 PLSQIPSEI 561
            L+ +P EI
Sbjct: 310 QLTILPQEI 318



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 147/246 (59%), Gaps = 1/246 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  +E+L +L+ LYL+ N+L +L   I  + NL  L L+ N LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  L+ L+ L L  N+    P  + +L +LK+L+L  N+I  +  +I  L  L  
Sbjct: 175 TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQY 234

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN++  LP E+ +LKNL TLDL++N L  LPKE+G    L TLDL++N+L  +P  
Sbjct: 235 LYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L LS N+L  +P+ + K  +L   ++    L++LP+  +  L ++  + L+
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNE-IEQLKNLQTLYLN 353

Query: 341 RNKFTA 346
            N+F++
Sbjct: 354 NNQFSS 359



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N  +++ LDL   +L++LP EIG LK LQRL L  NQL  LP+ I  L NL 
Sbjct: 36  RDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 95

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N L ++P+EI  L+NL  L L  N  L  +P E+    NLQ++ L +  L+ + 
Sbjct: 96  LLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQ-LTVLPQEIEQLKNLQLLYLHSNRLTTLS 154

Query: 559 SEI 561
            +I
Sbjct: 155 KDI 157



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 8/137 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + +  LP  +E+L +L+ L L  N+L  LP ++G + NL  L L  N L +LP  
Sbjct: 235 LYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L +N+L  LP  + KL +L  L L +N++ T+  +I+ L NL  L + +
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 226 N--------KIRELPPE 234
           N        +IR+L P+
Sbjct: 355 NQFSSQEKKRIRKLLPK 371


>gi|348586778|ref|XP_003479145.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Cavia
           porcellus]
          Length = 1557

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 193/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 46  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSS 105

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 106 LPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 165

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 166 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 223

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 224 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 259

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 260 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 319

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 320 LSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 378

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 379 LEFLPEEIGQMQKLRVLNLSDNRLKNLP 406



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 198/416 (47%), Gaps = 27/416 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 39  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSI 98

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L+SLP S+A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 99  PDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 158

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 159 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 218

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+ +P ++ K   L   ++    + ++ D  +S   ++
Sbjct: 219 SELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETV-DMDISGCEAL 277

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                    D I  G+    K L+ + + DN LT 
Sbjct: 278 EDLLLSSNMLQQLP--------------------DSI--GLL---KKLTTLKVDDNQLTM 312

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    L E +   N++  L   I  L +L  L +  N L +LP  IG+ + +  +
Sbjct: 313 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 372

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
            L  NKLE LP EIG +++L+ L L  N+L +LP +   L  L+ L + +N  +++
Sbjct: 373 SLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 428



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 180/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 115 NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 174

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 175 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLREL 234

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 235 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 294

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 295 GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS---------------- 338

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                             +I + H               +L  + + +N L  LP ++G+
Sbjct: 339 ------------------TIGYLH---------------SLRTLAVDENFLPELPREIGS 365

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 366 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 425

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 426 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 455



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 73/133 (54%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + +  L +  + +T LP ++  L+ LEE     N+L SLPS IGY+ +L  L + EN L 
Sbjct: 298 KKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLP 357

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  + + + + V+ LR NKL  LP  + ++  L++L L  NR+K +      L  L+ 
Sbjct: 358 ELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAA 417

Query: 221 LSMRDNKIRELPP 233
           L + DN+ + L P
Sbjct: 418 LWLSDNQSKALIP 430


>gi|7144483|gb|AAF26357.2| Scribble [Drosophila melanogaster]
          Length = 1756

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 211/435 (48%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F  C  + +  +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LG
Sbjct: 8   FKGCNRQ-VEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLG 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  + N + L  LD+  N + ++P  +  L SL++     N I  +     
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL++L + D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + ++P  LG L  L  L L +N+L+ +P  L                     GLL+ LT 
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPEL---------------------GLLTKLTY 225

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           ++   +S N+    P                 N+I     G+ S    L+ +++  NLL 
Sbjct: 226 LD---VSENRLEELP-----------------NEIS----GLVS----LTDLDLAQNLLE 257

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP  +     LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  
Sbjct: 258 ALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNN 317

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+++ N LE LP EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  
Sbjct: 318 LNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYS 377

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  ++L++N
Sbjct: 378 LVNLQ-LKAVWLSEN 391



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|386766579|ref|NP_001247322.1| scribbled, isoform R [Drosophila melanogaster]
 gi|383292971|gb|AFH06639.1| scribbled, isoform R [Drosophila melanogaster]
          Length = 1951

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 211/435 (48%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F  C  + +  +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LG
Sbjct: 8   FKGCNRQ-VEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLG 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  + N + L  LD+  N + ++P  +  L SL++     N I  +     
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL++L + D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + ++P  LG L  L  L L +N+L+ +P  L                     GLL+ LT 
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPEL---------------------GLLTKLTY 225

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           ++   +S N+    P                 N+I     G+ S    L+ +++  NLL 
Sbjct: 226 LD---VSENRLEELP-----------------NEIS----GLVS----LTDLDLAQNLLE 257

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP  +     LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  
Sbjct: 258 ALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNN 317

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+++ N LE LP EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  
Sbjct: 318 LNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYS 377

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  ++L++N
Sbjct: 378 LVNLQ-LKAVWLSEN 391



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|418688837|ref|ZP_13249972.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361995|gb|EJP17948.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 377

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 126/367 (34%), Positives = 186/367 (50%), Gaps = 49/367 (13%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N  ++RVLDL   +L  LP+ + KL +L+ LYL +N++                
Sbjct: 38  LTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTV-------------- 83

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
                    LP E+ +LKNL  L L  N L  LPKEI     L  LDL  N+L  +P  +
Sbjct: 84  ---------LPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEI 134

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L L  NRL ++ + + +  +L   ++    L++LP+ +   L ++ ++ LS 
Sbjct: 135 EQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEI-EQLKNLKSLYLSE 193

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P                             + +NL  + + +N +T LP ++  
Sbjct: 194 NQFATFPKE-------------------------IGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L L  NQ+  L ++I+ L NL+ L LS N L  LP  +G L  L+ LDL  N+L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
           ++LP EI  LK LQ L L +NQL  LP+ IG L NL +LS+  N L ++P EI  L+NL 
Sbjct: 289 KTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQ 348

Query: 522 TLYLNDN 528
           TLYLN+N
Sbjct: 349 TLYLNNN 355



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/331 (34%), Positives = 181/331 (54%), Gaps = 26/331 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + KL +L+ LYL+ N+L  LP +I  + NL  L L  N LT+LP  
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VLDL  N+L  LP  + +L +L++LYLR NR+ T+  DI+ L NL  L + +
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+ +LKNL +L L+ N     PKEIG    L  L L +N++  +P+ +  L 
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLK 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LS N+L ++P+ + +                        L ++  + LS N+ T
Sbjct: 231 KLQYLYLSDNQLITLPKEIEQ------------------------LKNLQTLDLSYNQLT 266

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++ +++  +NQ+  +P  I  + KNL  + + +N LT LP ++G    L
Sbjct: 267 ILPKEV-GQLENLQTLDLRNNQLKTLPKEI-EQLKNLQTLFLSNNQLTILPQEIGKLKNL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
             L+L  NQ++ L  +I+ L NL+ L L+NN
Sbjct: 325 LWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 154/309 (49%), Gaps = 27/309 (8%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  LDL   EL  +P  +G L NL RL L YN+L  +P+ + +  +L  
Sbjct: 37  DLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQL 96

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
             +    L++LP  +   L ++  + L  N+ T  P                        
Sbjct: 97  LYLRSNRLTTLPKEI-EQLKNLQVLDLGSNQLTVLPQE---------------------- 133

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
                + KNL  + ++ N LT+L  D+     L  L+L  NQ++ L  +I+ L NL+ L 
Sbjct: 134 ---IEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 190

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           LS N     P  IG L+ LK L L  N++  LPNEI  LK+LQ L L  NQL++LP+ I 
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIE 250

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L +  N L  +P+E+G LENL TL L +N  L  +P E+    NLQ + L N 
Sbjct: 251 QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLSNN 309

Query: 553 PLSQIPSEI 561
            L+ +P EI
Sbjct: 310 QLTILPQEI 318



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/264 (34%), Positives = 150/264 (56%), Gaps = 1/264 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  +E+L +L+ LYL  N+L +L   I  + NL  L L+ N LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  L+ L+ L L  N+    P  + +L +LK+L+L  N+I  +  +I  L  L  
Sbjct: 175 TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQY 234

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN++  LP E+ +LKNL TLDL++N L  LPKE+G    L TLDL++N+L  +P  
Sbjct: 235 LYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L LS N+L  +P+ + K  +L   ++    L++LP+  +  L ++  + L+
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNE-IEQLKNLQTLYLN 353

Query: 341 RNKFTAYPSGGPTQFTSVYSINFE 364
            N+F++       +      I FE
Sbjct: 354 NNQFSSQEKKRIRKLLPKCQIKFE 377



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N  +++ LDL   +L++LP EIG LK LQRL L  NQL  LP+ I  L NL 
Sbjct: 36  RDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 95

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N L ++P+EI  L+NL  L L  N  L  +P E+    NLQ++ L +  L+ + 
Sbjct: 96  LLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQ-LTVLPQEIEQLKNLQLLYLRSNRLTTLS 154

Query: 559 SEI 561
            +I
Sbjct: 155 KDI 157


>gi|442621262|ref|NP_001262989.1| scribbled, isoform U [Drosophila melanogaster]
 gi|440217926|gb|AGB96369.1| scribbled, isoform U [Drosophila melanogaster]
          Length = 1766

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 207/424 (48%), Gaps = 51/424 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LGL++N +  LP 
Sbjct: 18  VDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPP 77

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            + N + L  LD+  N + ++P  +  L SL++     N I  +      L NL++L + 
Sbjct: 78  DIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLN 137

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE+ ++P  LG L
Sbjct: 138 DMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYL 197

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             L  L L +N+L+ +P  L                     GLL+ LT ++   +S N+ 
Sbjct: 198 PGLHELWLDHNQLQRLPPEL---------------------GLLTKLTYLD---VSENRL 233

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
              P                 N+I     G+ S    L+ +++  NLL +LP  +     
Sbjct: 234 EELP-----------------NEIS----GLVS----LTDLDLAQNLLEALPDGIAKLSR 268

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  L+++ N LE L
Sbjct: 269 LTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYL 328

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  +  L+ L  ++
Sbjct: 329 PLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQ-LKAVW 387

Query: 525 LNDN 528
           L++N
Sbjct: 388 LSEN 391



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|28261017|gb|AAO32792.1| scribbled [Drosophila melanogaster]
          Length = 1850

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  ++ RH  L ++P  + + + +LK L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVNKRHCSLPQVPEEILRYSRTLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 198/403 (49%), Gaps = 50/403 (12%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           L+EL+L  N +  LP     +  L  LGL++N +  LP  + N + L  LD+  N + ++
Sbjct: 39  LKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  +  L SL++     N I  +      L NL++L + D  +  LP + G L  L +L+
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           L  N L+ LP+ I   T L  LDL  NE+ ++P  LG L  L  L L +N+L+ +P  L 
Sbjct: 159 LRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPEL- 217

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
                               GLL+ LT ++   +S N+    P                 
Sbjct: 218 --------------------GLLTKLTYLD---VSENRLEELP----------------- 237

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           N+I     G+ S    L+ +++  NLL +LP  +     LT L L  N++ +L++ + N 
Sbjct: 238 NEIS----GLVS----LTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC 289

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
            N++ L+L+ N L +LP+SIG + KL  L+++ N LE LP EIG    L  L L+ N+L 
Sbjct: 290 ENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLK 349

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            LP  +G+ T L  L V  N L  +P  +  L+ L  ++L++N
Sbjct: 350 KLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQ-LKAVWLSEN 391



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|327282312|ref|XP_003225887.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Anolis
           carolinensis]
          Length = 1454

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 194/386 (50%), Gaps = 28/386 (7%)

Query: 174 VLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
           VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  LP
Sbjct: 26  VLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLP 85

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             +  L NL  LD++ N +++ P+ I  C  L  ++   N +  +PD    L+NLT+L L
Sbjct: 86  TSIASLVNLKELDISKNGIQDFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 145

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           +   LE +P    + V L    +    L +LP  +   LT +  + L  N+F+  P    
Sbjct: 146 NDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLTQLERLDLGNNEFSELPE--- 201

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                                 +  + +NL ++ M +N L +LP  +G    L  L++  
Sbjct: 202 ----------------------VLEQIQNLKELWMDNNALQTLPGPIGRLKQLVYLDVSK 239

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N+I  +  DI     LE L+LS+N+L++LP SIG L++L  L +++N+L  LPN IG L 
Sbjct: 240 NRIESIDMDISGCEALEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTVLPNAIGNLS 299

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  L 
Sbjct: 300 LLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK-LE 358

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIP 558
            +P E+     L++++L +  L  +P
Sbjct: 359 FLPDEIGQMQKLRVLNLSDNRLKNLP 384



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 199/416 (47%), Gaps = 27/416 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE +  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 17  FRGEEEIVSVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSI 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L+SLP S+A+L  L+ LD+  N + + P  +     L I+    N I  +      
Sbjct: 77  PDNDLSSLPTSIASLVNLKELDISKNGIQDFPENIKCCKCLTIIEASVNPISKLPDGFTQ 136

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +   T L  LDL +NE 
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEF 196

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+++P  + +   L   +V    + S+ D  +S   ++
Sbjct: 197 SELPEVLEQIQNLKELWMDNNALQTLPGPIGRLKQLVYLDVSKNRIESI-DMDISGCEAL 255

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                    D I  G+  R   L+ + + DN LT 
Sbjct: 256 EDLLLSSNMLQQLP--------------------DSI--GLLKR---LTTLKVDDNQLTV 290

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    L E +   N++  L   I  L +L  L +  N L +LP  IG+ + +  +
Sbjct: 291 LPNAIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
            L  NKLE LP+EIG +++L+ L L  N+L +LP     L  L+ L + +N  +++
Sbjct: 351 SLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPITFTKLKELAALWLSDNQSKAL 406



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 177/368 (48%), Gaps = 51/368 (13%)

Query: 218 LSMLSMRDNKIRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           +S+L      ++++P E+    + L  L L  N +EELPK++ NC  L  L +  N+L +
Sbjct: 24  VSVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSS 83

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  + +L+NL  L +S N ++  PE +  C  L         +S LPDG          
Sbjct: 84  LPTSIASLVNLKELDISKNGIQDFPENIKCCKCLTIIEASVNPISKLPDGF--------- 134

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
                           TQ  ++  +      ++ +P   F R   L  + +++N L +LP
Sbjct: 135 ----------------TQLLNLTQLYLNDAFLEFLPAN-FGRLVKLRILELRENHLKTLP 177

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +     L  L+LG N+ S+L E ++ + NL+ L + NN L+ LP  IG L++L  LD+
Sbjct: 178 KSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNALQTLPGPIGRLKQLVYLDV 237

Query: 457 EENKLES-----------------------LPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
            +N++ES                       LP+ IG LK L  L +  NQL  LP AIG+
Sbjct: 238 SKNRIESIDMDISGCEALEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTVLPNAIGN 297

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L+ L       N L+S+P  IG L +L TL +++N  L  +P E+  C N+ +MSL +  
Sbjct: 298 LSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDEN-FLPELPREIGSCKNVTVMSLRSNK 356

Query: 554 LSQIPSEI 561
           L  +P EI
Sbjct: 357 LEFLPDEI 364



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 181/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ I   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 93  NLKELDISKNGIQDFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 152

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KLT L+ L L  N    +   ++ + NL  L
Sbjct: 153 LPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKEL 212

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 213 WMDNNALQTLPGPIGRLKQLVYLDVSKNRIESIDMDISGCEALEDLLLSSNMLQQLPDSI 272

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P  +     L EF+     L SLP                 
Sbjct: 273 GLLKRLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLP----------------- 315

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                     PT       I + H               +L  + + +N L  LP ++G+
Sbjct: 316 ----------PT-------IGYLH---------------SLRTLAVDENFLPELPREIGS 343

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L ++I  +  L VL LS+N LK LP +   L++L  L L +N+ 
Sbjct: 344 CKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPITFTKLKELAALWLSDNQS 403

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 404 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 433


>gi|260825680|ref|XP_002607794.1| hypothetical protein BRAFLDRAFT_275098 [Branchiostoma floridae]
 gi|229293143|gb|EEN63804.1| hypothetical protein BRAFLDRAFT_275098 [Branchiostoma floridae]
          Length = 553

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 140/475 (29%), Positives = 233/475 (49%), Gaps = 13/475 (2%)

Query: 109 SKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLAN 168
            +  +  LP  + +LT LEEL+L  N L  LP  I  + NLT L L  N L +LP  +  
Sbjct: 31  GQHGLEGLPDRLWELTDLEELHLEKNHLKELPDNIKLLKNLTTLYLHGNDLETLPPEVGQ 90

Query: 169 LQQLRVLDLRHNKLNELPMV-VYKLTSLKILYLRFNRIKTVHPDI-QYLSNLSMLSMRDN 226
           L  L  LD+ +N   ++P+  + +L  LK+L L    +  V  DI ++L NL +L +  N
Sbjct: 91  LGHLESLDVSNNPEFKIPLEHLLQLRQLKVLRLHNLHLGQVPEDILKWLLNLEILGLNGN 150

Query: 227 KIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           ++ +LP     L  L  L L +N+   LP  + + + L TLDL+ N+L ++P+ +  L+N
Sbjct: 151 QLVDLPIYTVRLNKLKELHLRNNNFSTLPVHVCSLSALTTLDLEGNKLHDLPNEIVQLVN 210

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  + L  N    +P  L    ++    + G  +  +P   +  L  +  +  S NK   
Sbjct: 211 LQEVYLQNNFFHHLPVQLCALGNIAVLELHGNHVKEIPPD-ICRLAKLREVNFSNNKIEK 269

Query: 347 YPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
            P   G       +Y+   + N +  +P   F R + L  V+   N    +P+ L     
Sbjct: 270 LPKEVGALVNLEVLYA---KSNFLKSLPKA-FGRLQRLRFVDFAQNRFEEMPVSLCMLGN 325

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN---KL 461
           L  L +  N +  + +++ NL  L+ L LS N+ +K P +I NL  L+ L L ++   +L
Sbjct: 326 LAVLAMDDNNLYHIPKEVANLRKLKELGLSGNVFEKFPEAICNLPSLEKLFLGQDHGQQL 385

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            S+P+ I  L  LQ L L+ N L +LP +I  L  LS LS  +N LQ +P+ I  L+ L 
Sbjct: 386 TSVPSTISKLTSLQDLCLEYNALTTLPDSISQLPALSRLSCHDNYLQKLPDSICELKALK 445

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
            LYL++N  L  +P +    + L+ + +D    +  P+++   G   I  ++ M+
Sbjct: 446 YLYLHNNL-LTALPSDFDFLTTLKELRIDAEKFAYPPADVCRIGFLGIREFMLME 499



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 181/383 (47%), Gaps = 26/383 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L+ + +  LP    +L  L+EL+L  N  ++LP  +  ++ LT L L  N L  LP+ 
Sbjct: 145 LGLNGNQLVDLPIYTVRLNKLKELHLRNNNFSTLPVHVCSLSALTTLDLEGNKLHDLPNE 204

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L+ + L++N  + LP+ +  L ++ +L L  N +K + PDI  L+ L  ++  +
Sbjct: 205 IVQLVNLQEVYLQNNFFHHLPVQLCALGNIAVLELHGNHVKEIPPDICRLAKLREVNFSN 264

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NKI +LP E+G L NL  L    N L+ LPK  G    L  +D   N    +P  L  L 
Sbjct: 265 NKIEKLPKEVGALVNLEVLYAKSNFLKSLPKAFGRLQRLRFVDFAQNRFEEMPVSLCMLG 324

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L +  N L  +P+ ++    L E  + G      P+  + +L S+  + L ++   
Sbjct: 325 NLAVLAMDDNNLYHIPKEVANLRKLKELGLSGNVFEKFPEA-ICNLPSLEKLFLGQDH-- 381

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                   Q TSV S                S+  +L  + ++ N LT+LP  +     L
Sbjct: 382 ------GQQLTSVPS--------------TISKLTSLQDLCLEYNALTTLPDSISQLPAL 421

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
           + L+   N + KL + I  L  L+ L L NNLL  LPS    L  LK L ++  K    P
Sbjct: 422 SRLSCHDNYLQKLPDSICELKALKYLYLHNNLLTALPSDFDFLTTLKELRIDAEKFAYPP 481

Query: 466 NE---IGFLKELQRLILQSNQLV 485
            +   IGFL   + ++++  +++
Sbjct: 482 ADVCRIGFLGIREFMLMEKRKIL 504



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 153/328 (46%), Gaps = 29/328 (8%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C    +  LDL  + +  LP  + +L +L+E+YL  N    LP Q+  + N+  L L  N
Sbjct: 183 CSLSALTTLDLEGNKLHDLPNEIVQLVNLQEVYLQNNFFHHLPVQLCALGNIAVLELHGN 242

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            +  +P  +  L +LR ++  +NK+ +LP  V  L +L++LY + N +K++      L  
Sbjct: 243 HVKEIPPDICRLAKLREVNFSNNKIEKLPKEVGALVNLEVLYAKSNFLKSLPKAFGRLQR 302

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  +    N+  E+P  L  L NL  L +  N+L  +PKE+ N   L  L L  N     
Sbjct: 303 LRFVDFAQNRFEEMPVSLCMLGNLAVLAMDDNNLYHIPKEVANLRKLKELGLSGNVFEKF 362

Query: 278 PDMLGNLINLTRLRLSYN---RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           P+ + NL +L +L L  +   +L SVP T+SK   L +  +E  AL++LPD +       
Sbjct: 363 PEAICNLPSLEKLFLGQDHGQQLTSVPSTISKLTSLQDLCLEYNALTTLPDSI------- 415

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                             +Q  ++  ++   N + K+P  I    K L  + + +NLLT+
Sbjct: 416 ------------------SQLPALSRLSCHDNYLQKLPDSI-CELKALKYLYLHNNLLTA 456

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDI 422
           LP D      L EL +   + +    D+
Sbjct: 457 LPSDFDFLTTLKELRIDAEKFAYPPADV 484


>gi|6782322|emb|CAB70601.1| Vartul-1 protein [Drosophila melanogaster]
          Length = 1756

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  ++ RH  L ++P  + + + +LK L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVNKRHCSLPQVPEEILRYSRTLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 198/403 (49%), Gaps = 50/403 (12%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           L+EL+L  N +  LP     +  L  LGL++N +  LP  + N + L  LD+  N + ++
Sbjct: 39  LKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  +  L SL++     N I  +      L NL++L + D  +  LP + G L  L +L+
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           L  N L+ LP+ I   T L  LDL  NE+ ++P  LG L  L  L L +N+L+ +P  L 
Sbjct: 159 LRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPEL- 217

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
                               GLL+ LT ++   +S N+    P                 
Sbjct: 218 --------------------GLLTKLTYLD---VSENRLEELP----------------- 237

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           N+I     G+ S    L+ +++  NLL +LP  +     LT L L  N++ +L++ + N 
Sbjct: 238 NEIS----GLVS----LTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC 289

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
            N++ L+L+ N L +LP+SIG + KL  L+++ N LE LP EIG    L  L L+ N+L 
Sbjct: 290 ENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLK 349

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            LP  +G+ T L  L V  N L  +P  +  L+ L  ++L++N
Sbjct: 350 KLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQ-LKAVWLSEN 391



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|417402294|gb|JAA47999.1| Putative leucine-rich repeat-containing protein 1 [Desmodus
           rotundus]
          Length = 524

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 195/390 (50%), Gaps = 28/390 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + +  +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I
Sbjct: 12  RHVETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LPPE+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLT 131

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L ++   L+S+PE +    +L    +    L+ LPD L                     
Sbjct: 132 CLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL--------------------- 170

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
               TQ   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L
Sbjct: 171 ----TQLRRLEELDLGNNEIYNLPESIGALL-HLKDLWLDGNQLSELPQEIGNLQNLLCL 225

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L +++N+L  LP  +
Sbjct: 226 DVSENKLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPETV 285

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + L  L+L  N+L +LP++IG L  LS L+   N L S+P+EIG   +L    + DN
Sbjct: 286 GDCESLTELVLTENRLPALPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDN 345

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L  IP E++  + L ++ +    L  +P
Sbjct: 346 R-LTRIPAEVSQATELHVLDVAGNRLLHLP 374



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 135/435 (31%), Positives = 204/435 (46%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++  +D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 7   LWRCNR-HVETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N + E+P  +    +L+I     N +  +     
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL+ LS+ D  ++ LP  +G L NL +L+L  N L  LP  +     L  LDL +NE
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + N+P+ +G L++L  L L  N+L  +P+ +    +L   +V    L  LP+ + S LTS
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLQNLLCLDVSENKLERLPEEI-SGLTS 244

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ +S                         N ++ IP GI  + K LS + +  N LT
Sbjct: 245 LTDLVIS------------------------QNLLETIPDGI-GKLKKLSILKVDQNRLT 279

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            LP  +G    LTEL                       VL+ N L  LP SIG L+KL  
Sbjct: 280 QLPETVGDCESLTEL-----------------------VLTENRLPALPKSIGKLKKLSN 316

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+ + NKL SLP EIG    L    ++ N+L  +P  +   T L  L V  N L  +P  
Sbjct: 317 LNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLS 376

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  L+L+DN
Sbjct: 377 LTALK-LKALWLSDN 390



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/314 (35%), Positives = 166/314 (52%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 84  LVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G L+NL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 204 LDGNQLSELPQEIGNLQNLLCLDVSENKLERLPEEISGLTSLTDLVISQNLLETIPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PET+  C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 264 KLKKLSILKVDQNRLTQLPETVGDCESLTELVLTENRLPALPKS-IGKLKKLSNLNADRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 323 KLVSLPKEIGGCCSLT-VFCV--RDNRLTRIPAEV-SQATELHVLDVAGNRLLHLPLSL- 377

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 378 TALKLKALWLSDNQ 391



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 168/349 (48%), Gaps = 56/349 (16%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L ELP++      L  L L  NE+  +P  + N + L  L +S N + 
Sbjct: 36  RSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIP 95

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQ 354
            +PE++S C  L   +  G  L+ LP+    L +LT  S+N+I+L            P  
Sbjct: 96  EIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQ---------SLPEN 146

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
             ++Y                     NL+ + +++NLLT LP  L     L EL+LG N+
Sbjct: 147 IGNLY---------------------NLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           I  L E I  L++L+ L L  N L +LP  IGNL+ L CLD+ ENKLE LP EI  L  L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLQNLLCLDVSENKLERLPEEISGLTSL 245

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC---- 530
             L++  N L ++P  IG L  LS L V +N L  +PE +G  E+L  L L +N      
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPETVGDCESLTELVLTENRLPALP 305

Query: 531 ------------------LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                             L ++P E+  C +L +  + +  L++IP+E+
Sbjct: 306 KSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEV 354


>gi|418712104|ref|ZP_13272849.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791371|gb|EKR85047.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|455791547|gb|EMF43354.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 377

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 126/367 (34%), Positives = 186/367 (50%), Gaps = 49/367 (13%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N  ++RVLDL   +L  LP+ + KL +L+ LYL +N++                
Sbjct: 38  LTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTV-------------- 83

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
                    LP E+ +LKNL  L L  N L  LPKEI     L  LDL  N+L  +P  +
Sbjct: 84  ---------LPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEI 134

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L L  NRL ++ + + +  +L   ++    L++LP+ +   L ++ ++ LS 
Sbjct: 135 EQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEI-EQLKNLKSLYLSE 193

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P                             + +NL  + + +N +T LP ++  
Sbjct: 194 NQFATFPKE-------------------------IGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L L  NQ+  L ++I+ L NL+ L LS N L  LP  +G L  L+ LDL  N+L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
           ++LP EI  LK LQ L L +NQL  LP+ IG L NL +LS+  N L ++P EI  L+NL 
Sbjct: 289 KTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQ 348

Query: 522 TLYLNDN 528
           TLYLN+N
Sbjct: 349 TLYLNNN 355



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/331 (34%), Positives = 180/331 (54%), Gaps = 26/331 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + KL +L+ LYL+ N+L  LP +I  + NL  L L  N LT+LP  
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VLDL  N+L  LP  + +L +L++LYL  NR+ T+  DI+ L NL  L + +
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+ +LKNL +L L+ N     PKEIG    L  L L +N++  +P+ +  L 
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLK 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LS N+L ++P+ + +                        L ++  + LS N+ T
Sbjct: 231 KLQYLYLSDNQLITLPKEIEQ------------------------LKNLQTLDLSYNQLT 266

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++ +++  +NQ+  +P  I  + KNL  + + +N LT LP ++G    L
Sbjct: 267 ILPKEV-GQLENLQTLDLRNNQLKTLPKEI-EQLKNLQTLFLSNNQLTILPQEIGKLKNL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
             L+L  NQ++ L  +I+ L NL+ L L+NN
Sbjct: 325 LWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 153/309 (49%), Gaps = 27/309 (8%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  LDL   EL  +P  +G L NL RL L YN+L  +P+ + +  +L  
Sbjct: 37  DLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQL 96

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
             +    L++LP  +   L ++  + L  N+ T  P                        
Sbjct: 97  LYLRSNRLTTLPKEI-EQLKNLQVLDLGSNQLTVLPQE---------------------- 133

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
                + KNL  + +  N LT+L  D+     L  L+L  NQ++ L  +I+ L NL+ L 
Sbjct: 134 ---IEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 190

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           LS N     P  IG L+ LK L L  N++  LPNEI  LK+LQ L L  NQL++LP+ I 
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIE 250

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L +  N L  +P+E+G LENL TL L +N  L  +P E+    NLQ + L N 
Sbjct: 251 QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLSNN 309

Query: 553 PLSQIPSEI 561
            L+ +P EI
Sbjct: 310 QLTILPQEI 318



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 147/246 (59%), Gaps = 1/246 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  +E+L +L+ LYL+ N+L +L   I  + NL  L L+ N LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  L+ L+ L L  N+    P  + +L +LK+L+L  N+I  +  +I  L  L  
Sbjct: 175 TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQY 234

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN++  LP E+ +LKNL TLDL++N L  LPKE+G    L TLDL++N+L  +P  
Sbjct: 235 LYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L LS N+L  +P+ + K  +L   ++    L++LP+  +  L ++  + L+
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNE-IEQLKNLQTLYLN 353

Query: 341 RNKFTA 346
            N+F++
Sbjct: 354 NNQFSS 359



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 93/157 (59%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L+ + IT LP  + KL  L+ LYL  N+L +LP +I  + NL  L L+ N LT
Sbjct: 207 QNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLT 266

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  L+ L+ LDLR+N+L  LP  + +L +L+ L+L  N++  +  +I  L NL  
Sbjct: 267 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLW 326

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           LS+  N++  LP E+ +LKNL TL L +N      KE
Sbjct: 327 LSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSSQEKE 363



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N  +++ LDL   +L++LP EIG LK LQRL L  NQL  LP+ I  L NL 
Sbjct: 36  RDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 95

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N L ++P+EI  L+NL  L L  N  L  +P E+    NLQ++ L +  L+ + 
Sbjct: 96  LLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQ-LTVLPQEIEQLKNLQLLYLHSNRLTTLS 154

Query: 559 SEI 561
            +I
Sbjct: 155 KDI 157



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 8/137 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + +  LP  +E+L +L+ L L  N+L  LP ++G + NL  L L  N L +LP  
Sbjct: 235 LYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L +N+L  LP  + KL +L  L L +N++ T+  +I+ L NL  L + +
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 226 N--------KIRELPPE 234
           N        KIR+L P+
Sbjct: 355 NQFSSQEKEKIRKLLPK 371


>gi|62472958|ref|NP_001014669.1| scribbled, isoform I [Drosophila melanogaster]
 gi|61679402|gb|AAX52996.1| scribbled, isoform I [Drosophila melanogaster]
          Length = 1711

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 211/435 (48%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F  C  + +  +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LG
Sbjct: 8   FKGCNRQ-VEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLG 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  + N + L  LD+  N + ++P  +  L SL++     N I  +     
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL++L + D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + ++P  LG L  L  L L +N+L+ +P  L                     GLL+ LT 
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPEL---------------------GLLTKLTY 225

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           ++   +S N+    P                 N+I     G+ S    L+ +++  NLL 
Sbjct: 226 LD---VSENRLEELP-----------------NEIS----GLVS----LTDLDLAQNLLE 257

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP  +     LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  
Sbjct: 258 ALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNN 317

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+++ N LE LP EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  
Sbjct: 318 LNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYS 377

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  ++L++N
Sbjct: 378 LVNLQ-LKAVWLSEN 391



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 189/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG+   
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI--- 263

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
                                  + + +  +  + N++ ++        +N+ ++ + +N
Sbjct: 264 ----------------------AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|386766571|ref|NP_001247319.1| scribbled, isoform N [Drosophila melanogaster]
 gi|383292967|gb|AFH06636.1| scribbled, isoform N [Drosophila melanogaster]
          Length = 2554

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 211/435 (48%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F  C  + +  +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LG
Sbjct: 8   FKGCNRQ-VEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLG 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  + N + L  LD+  N + ++P  +  L SL++     N I  +     
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL++L + D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + ++P  LG L  L  L L +N+L+ +P  L                     GLL+ LT 
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPEL---------------------GLLTKLTY 225

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           ++   +S N+    P                 N+I     G+ S    L+ +++  NLL 
Sbjct: 226 LD---VSENRLEELP-----------------NEIS----GLVS----LTDLDLAQNLLE 257

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP  +     LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  
Sbjct: 258 ALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNN 317

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+++ N LE LP EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  
Sbjct: 318 LNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYS 377

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  ++L++N
Sbjct: 378 LVNLQ-LKAVWLSEN 391



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|327266826|ref|XP_003218205.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like [Anolis carolinensis]
          Length = 612

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 244/479 (50%), Gaps = 9/479 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + I  +DL+   +T +P  V  L  LEEL+L  N + S+P  I  + N+  L L +N++ 
Sbjct: 66  DRIFFVDLANKKLTAIPCQVFDLKDLEELHLERNMIESIPESIDQLKNVKVLYLNKNNIG 125

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPM-VVYKLTSLKILYLRFNRIKTVHPDI-QYLSNL 218
           +L      L+ L+ LDL +N L+   + +V KL +L  L L    +     +I ++L +L
Sbjct: 126 TLCKEFGELKCLQNLDLSNNPLSCDSLNIVSKLRALCQLRLYDVNLDEFPVEICKHLHHL 185

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            +L +  N +  LP E+  +  L  + L  N  E  P+E+ +   L  +DL+ NEL +IP
Sbjct: 186 KLLGLSTNNLTCLPKEVVNMTKLTEIYLKSNKFENFPQELCHLYNLEIIDLEKNELNSIP 245

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           + + +L  L +  ++YN L +VP+TLSKC  L+  ++    L  LP  L   LT I    
Sbjct: 246 EEICSLKRLAQFFIAYNSLTAVPDTLSKCSKLSILDLSNNLLHKLPRSL-KELTEIKEFG 304

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           LS N    +P     ++ S+  +  ++  +  + +   ++  N+  +++ +NLL + P +
Sbjct: 305 LSGNPLANFPRQI-RRWRSLIVVYLKNCTLQMV-HPSLAKLTNMMILDLSENLLDTFPRE 362

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           + T   L  L L  NQI+++  ++  L  L+ L L++N     P  I +L+ L+ L + +
Sbjct: 363 ICTMENLEVLALDDNQITEVPPEVHRLSRLKCLGLTSNRFAWFPEEIFHLQSLEKLYMGQ 422

Query: 459 NK---LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           +K   L  LP  I  L+ L+ L L+ N L  LP +IG L NL  L    N L  +P+ I 
Sbjct: 423 DKGTKLADLPENISQLQNLKELYLEKNDLEYLPTSIGLLNNLEILDCHNNFLIELPDSIC 482

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
            L+ L  L L+ N  L  +P  L     LQ++SL+  PL   P E+   G   I +YLK
Sbjct: 483 RLQGLQKLLLHSNQ-LFQLPENLDSLEKLQVLSLEGNPLMDPPVEVFSEGLPAIWQYLK 540



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 157/348 (45%), Gaps = 46/348 (13%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+  +DL K+ +  +P  +  L  L + ++  N L ++P  +   + L+ L L+ N
Sbjct: 226 CHLYNLEIIDLEKNELNSIPEEICSLKRLAQFFIAYNSLTAVPDTLSKCSKLSILDLSNN 285

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L  LP SL  L +++   L  N L   P  + +  SL ++YL+   ++ VHP +  L+N
Sbjct: 286 LLHKLPRSLKELTEIKEFGLSGNPLANFPRQIRRWRSLIVVYLKNCTLQMVHPSLAKLTN 345

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           + +L + +N +   P E+  ++NL  L L  N + E+P E+   + L  L L  N     
Sbjct: 346 MMILDLSENLLDTFPREICTMENLEVLALDDNQITEVPPEVHRLSRLKCLGLTSNRFAWF 405

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P+ + +L +L +L +  ++                    G  L+ LP+  +S L ++  +
Sbjct: 406 PEEIFHLQSLEKLYMGQDK--------------------GTKLADLPEN-ISQLQNLKEL 444

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            L +N     P       TS+  +N                  NL  ++  +N L  LP 
Sbjct: 445 YLEKNDLEYLP-------TSIGLLN------------------NLEILDCHNNFLIELPD 479

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
            +    GL +L L +NQ+ +L E++ +L  L+VL L  N L   P  +
Sbjct: 480 SICRLQGLQKLLLHSNQLFQLPENLDSLEKLQVLSLEGNPLMDPPVEV 527



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 153/335 (45%), Gaps = 35/335 (10%)

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS-----KCV 308
           +P +I +    V  DL + +L  IP  + +L +L  L L  N +ES+PE++      K +
Sbjct: 60  VPVQITDRIFFV--DLANKKLTAIPCQVFDLKDLEELHLERNMIESIPESIDQLKNVKVL 117

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +LN+ N+               L  + N+ LS N  +       ++  ++  +      +
Sbjct: 118 YLNKNNIGTLCKE------FGELKCLQNLDLSNNPLSCDSLNIVSKLRALCQLRLYDVNL 171

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
           D+ P  I     +L  + +  N LT LP ++     LTE+ L +N+     +++ +L NL
Sbjct: 172 DEFPVEICKHLHHLKLLGLSTNNLTCLPKEVVNMTKLTEIYLKSNKFENFPQELCHLYNL 231

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           E++ L  N L  +P  I +L++L    +  N L ++P+ +    +L  L L +N L  LP
Sbjct: 232 EIIDLEKNELNSIPEEICSLKRLAQFFIAYNSLTAVPDTLSKCSKLSILDLSNNLLHKLP 291

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT------------------- 529
           R++  LT +    +  N L + P +I    +L  +YL + T                   
Sbjct: 292 RSLKELTEIKEFGLSGNPLANFPRQIRRWRSLIVVYLKNCTLQMVHPSLAKLTNMMILDL 351

Query: 530 ---CLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
               L+  P E+    NL++++LD+  ++++P E+
Sbjct: 352 SENLLDTFPREICTMENLEVLALDDNQITEVPPEV 386


>gi|363731180|ref|XP_427026.3| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Gallus
           gallus]
          Length = 1894

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 128/390 (32%), Positives = 200/390 (51%), Gaps = 6/390 (1%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++  LD    S+  +P  + + +  LEEL L  N+L  LP     + NL  LG
Sbjct: 8   LWRCNR-HVEALDRRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLG 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N + E+P  +    SL+I     N +  +     
Sbjct: 67  LSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSRLPEGFT 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L +L  L++ D  ++ LP ++G L NLVTL+L  N L+ LP  +     L  LDL  N+
Sbjct: 127 QLRSLGHLALNDVSLQSLPNDIGNLANLVTLELRENLLKTLPTSLSFLVKLEQLDLGGND 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L  +PD LG L NL  L L  N+L ++P  L     L   +V    L  LP+  +S L +
Sbjct: 187 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQLPNE-VSGLVA 245

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ LS+N     P  G  Q   +  +  + N++ ++   I    +NLS++ + +N+LT
Sbjct: 246 LTDLLLSQNLLECIPD-GIGQLKQLSILKVDQNRLTEVTESIGD-CENLSELILTENMLT 303

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP  LG    LT LN+  N+++ L  +I    NL VL L +N L  LP+ + N  +L  
Sbjct: 304 ALPKSLGKLTKLTNLNVDRNRLTSLPAEIGGCANLNVLSLRDNRLALLPAELANTTELHV 363

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           LD+  N+L++LP  +  L  L+ L L  NQ
Sbjct: 364 LDVAGNRLQNLPFALTNLN-LKALWLAENQ 392



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 200/394 (50%), Gaps = 32/394 (8%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + +  LD RH  L  +P  +Y+ + SL+ L L  N+++ +      L NL  L + DN+I
Sbjct: 13  RHVEALDRRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM-------- 280
           + LPPE+     LV LD++ N + E+P+ I  C  L   D   N L  +P+         
Sbjct: 73  QRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSRLPEGFTQLRSLG 132

Query: 281 ---------------LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
                          +GNL NL  L L  N L+++P +LS  V L + ++ G  L  LPD
Sbjct: 133 HLALNDVSLQSLPNDIGNLANLVTLELRENLLKTLPTSLSFLVKLEQLDLGGNDLEVLPD 192

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGP--TQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
             L +L ++  + L RN+ +A P   P       +  ++   N+++++P  + S    L+
Sbjct: 193 -TLGALPNLRELWLDRNQLSALP---PELGNLRRLVCLDVSENKLEQLPNEV-SGLVALT 247

Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
            + +  NLL  +P  +G    L+ L +  N++++++E I +  NL  L+L+ N+L  LP 
Sbjct: 248 DLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTEVTESIGDCENLSELILTENMLTALPK 307

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
           S+G L KL  L+++ N+L SLP EIG    L  L L+ N+L  LP  + + T L  L V 
Sbjct: 308 SLGKLTKLTNLNVDRNRLTSLPAEIGGCANLNVLSLRDNRLALLPAELANTTELHVLDVA 367

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            N LQ++P  +  L NL  L+L +N     + F+
Sbjct: 368 GNRLQNLPFALTNL-NLKALWLAENQSQPMLKFQ 400


>gi|418728131|ref|ZP_13286711.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777176|gb|EKR57144.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 377

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 126/367 (34%), Positives = 186/367 (50%), Gaps = 49/367 (13%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N  ++RVLDL   +L  LP+ + KL +L+ LYL +N++                
Sbjct: 38  LTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTV-------------- 83

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
                    LP E+ +LKNL  L L  N L  LPKEI     L  LDL  N+L  +P  +
Sbjct: 84  ---------LPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEI 134

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L L  NRL ++ + + +  +L   ++    L++LP+ +   L ++ ++ LS 
Sbjct: 135 EQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEI-EQLKNLKSLYLSE 193

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P                             + +NL  + + +N +T LP ++  
Sbjct: 194 NQFATFPKE-------------------------IGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L L  NQ+  L ++I+ L NL+ L LS N L  LP  +G L  L+ LDL  N+L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
           ++LP EI  LK LQ L L +NQL  LP+ IG L NL +LS+  N L ++P EI  L+NL 
Sbjct: 289 KTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQ 348

Query: 522 TLYLNDN 528
           TLYLN+N
Sbjct: 349 TLYLNNN 355



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/331 (34%), Positives = 180/331 (54%), Gaps = 26/331 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + KL +L+ LYL+ N+L  LP +I  + NL  L L  N LT+LP  
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VLDL  N+L  LP  + +L +L++LYL  NR+ T+  DI+ L NL  L + +
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+ +LKNL +L L+ N     PKEIG    L  L L +N++  +P+ +  L 
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLK 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LS N+L ++P+ + +                        L ++  + LS N+ T
Sbjct: 231 KLQYLYLSDNQLITLPKEIEQ------------------------LKNLQTLDLSYNQLT 266

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++ +++  +NQ+  +P  I  + KNL  + + +N LT LP ++G    L
Sbjct: 267 ILPKEV-GQLENLQTLDLRNNQLKTLPKEI-EQLKNLQTLFLSNNQLTILPQEIGKLKNL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
             L+L  NQ++ L  +I+ L NL+ L L+NN
Sbjct: 325 LWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 153/309 (49%), Gaps = 27/309 (8%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  LDL   EL  +P  +G L NL RL L YN+L  +P+ + +  +L  
Sbjct: 37  DLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQL 96

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
             +    L++LP  +   L ++  + L  N+ T  P                        
Sbjct: 97  LYLRSNRLTTLPKEI-EQLKNLQVLDLGSNQLTVLPQE---------------------- 133

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
                + KNL  + +  N LT+L  D+     L  L+L  NQ++ L  +I+ L NL+ L 
Sbjct: 134 ---IEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 190

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           LS N     P  IG L+ LK L L  N++  LPNEI  LK+LQ L L  NQL++LP+ I 
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIE 250

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L +  N L  +P+E+G LENL TL L +N  L  +P E+    NLQ + L N 
Sbjct: 251 QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLSNN 309

Query: 553 PLSQIPSEI 561
            L+ +P EI
Sbjct: 310 QLTILPQEI 318



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 92/264 (34%), Positives = 151/264 (57%), Gaps = 1/264 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  +E+L +L+ LYL+ N+L +L   I  + NL  L L+ N LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  L+ L+ L L  N+    P  + +L +LK+L+L  N+I  +  +I  L  L  
Sbjct: 175 TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQY 234

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN++  LP E+ +LKNL TLDL++N L  LPKE+G    L TLDL++N+L  +P  
Sbjct: 235 LYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L LS N+L  +P+ + K  +L   ++    L++LP+  +  L ++  + L+
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNE-IEQLKNLQTLYLN 353

Query: 341 RNKFTAYPSGGPTQFTSVYSINFE 364
            N+F++       +      I FE
Sbjct: 354 NNQFSSQEKKRIRKLLPKCQIKFE 377



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N  +++ LDL   +L++LP EIG LK LQRL L  NQL  LP+ I  L NL 
Sbjct: 36  RDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 95

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N L ++P+EI  L+NL  L L  N  L  +P E+    NLQ++ L +  L+ + 
Sbjct: 96  LLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQ-LTVLPQEIEQLKNLQLLYLHSNRLTTLS 154

Query: 559 SEI 561
            +I
Sbjct: 155 KDI 157


>gi|260788680|ref|XP_002589377.1| hypothetical protein BRAFLDRAFT_218230 [Branchiostoma floridae]
 gi|229274554|gb|EEN45388.1| hypothetical protein BRAFLDRAFT_218230 [Branchiostoma floridae]
          Length = 470

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 228/477 (47%), Gaps = 30/477 (6%)

Query: 104 LNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLP 163
           L LDLS   +T +P  V  +T L+ L +  NKL S+P  IG +  L+ L    N LTSLP
Sbjct: 16  LKLDLSNRGLTSIPEEVFAITDLDYLAVSNNKLTSIPEAIGRLQKLSRLDADGNMLTSLP 75

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
            ++ +LQ++  L +  N+L E+P  V  L +L++L +  N++ T  P ++ L  L  L +
Sbjct: 76  QAIGSLQKMTDLYINDNQLTEVPPGVCSLPNLEVLGVGNNKLSTFPPGVEKLQKLRELYI 135

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
            DN++ E+PP +  L NL  L + +N L   P  +     L  L +  N+L  +P  + +
Sbjct: 136 NDNQLTEVPPGVCSLPNLEVLGVGNNKLSTFPPGVEKLQKLRELYINDNQLTEVPSGVCS 195

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L NL  L +  N L + P  + K   + E  + G  L+ +P G + SL ++  +++  N 
Sbjct: 196 LPNLEVLSVFNNNLSTFPLGVEKLQKVRELYIYGNQLTEVPSG-VCSLPNLEVLSVFNNN 254

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
            + +P G                           + + + K+ +  N LT +P  +    
Sbjct: 255 LSTFPLG-------------------------VEKLQKVRKLYIYGNQLTEVPSGVCLLP 289

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN---K 460
            L  L++G N I +L  D+  L  L+ L +      + P  + +L+ L+ L   +N   K
Sbjct: 290 NLEVLSVGMNPIRRLPNDVTRLARLKTLSVPGCQFDEFPRQVLHLKTLEELYAGQNGGRK 349

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
            + +P+E+G L+ L+ L L++N L +LP  + HL NL  + +  N   + PE +  L  +
Sbjct: 350 FDMVPDEVGNLQHLRLLSLENNFLRTLPSTMSHLHNLRVVQLPNNKFDTFPEVLCELPAM 409

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQG 577
             L + +N  +  +   L     L+ + +   PL+  P ++   G   I+ +LK + 
Sbjct: 410 AKLDIRNNN-ITRLLTALHRADKLRDLDVSGNPLTYPPQDVCKQGTGAIMAFLKQEA 465



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 163/352 (46%), Gaps = 8/352 (2%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+  L +  + ++  PP VEKL  L ELY+  N+L  +P  +  + NL  LG+  N
Sbjct: 102 CSLPNLEVLGVGNNKLSTFPPGVEKLQKLRELYINDNQLTEVPPGVCSLPNLEVLGVGNN 161

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L++ P  +  LQ+LR L +  N+L E+P  V  L +L++L +  N + T    ++ L  
Sbjct: 162 KLSTFPPGVEKLQKLRELYINDNQLTEVPSGVCSLPNLEVLSVFNNNLSTFPLGVEKLQK 221

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           +  L +  N++ E+P  +  L NL  L + +N+L   P  +     +  L +  N+L  +
Sbjct: 222 VRELYIYGNQLTEVPSGVCSLPNLEVLSVFNNNLSTFPLGVEKLQKVRKLYIYGNQLTEV 281

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  +  L NL  L +  N +  +P  +++   L   +V GC     P  +L  L ++  +
Sbjct: 282 PSGVCLLPNLEVLSVGMNPIRRLPNDVTRLARLKTLSVPGCQFDEFPRQVL-HLKTLEEL 340

Query: 338 TLSRN---KFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
              +N   KF   P   G  Q   + S+  E+N +  +P    S   NL  V + +N   
Sbjct: 341 YAGQNGGRKFDMVPDEVGNLQHLRLLSL--ENNFLRTLP-STMSHLHNLRVVQLPNNKFD 397

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           + P  L     + +L++  N I++L   +     L  L +S N L   P  +
Sbjct: 398 TFPEVLCELPAMAKLDIRNNNITRLLTALHRADKLRDLDVSGNPLTYPPQDV 449



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 1/161 (0%)

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
           T  G  +L+L    ++ + E++  + +L+ L +SNN L  +P +IG L+KL  LD + N 
Sbjct: 11  TVNGHLKLDLSNRGLTSIPEEVFAITDLDYLAVSNNKLTSIPEAIGRLQKLSRLDADGNM 70

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L SLP  IG L+++  L +  NQL  +P  +  L NL  L VG N L + P  +  L+ L
Sbjct: 71  LTSLPQAIGSLQKMTDLYINDNQLTEVPPGVCSLPNLEVLGVGNNKLSTFPPGVEKLQKL 130

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             LY+NDN  L  +P  +    NL+++ + N  LS  P  +
Sbjct: 131 RELYINDNQ-LTEVPPGVCSLPNLEVLGVGNNKLSTFPPGV 170


>gi|417766182|ref|ZP_12414136.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400351636|gb|EJP03855.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 423

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 131/381 (34%), Positives = 200/381 (52%), Gaps = 26/381 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++ NLDLS   +  LP  + +L +L++L L GN+   L  +I  + +L  L L  N LT 
Sbjct: 42  DVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTV 101

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  LQ L+ L L  N+L  LP  + +  +L+ L L  N++  +  +I  L NL  L
Sbjct: 102 LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQEL 161

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           S+  NK+  LP E+ +LK+L  LDL HN L  + KE+     L  LDL+ N+L  IP  +
Sbjct: 162 SLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEI 221

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L +L  L L+ N+L S+P+ + +  +L   N                        L  
Sbjct: 222 RQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLN------------------------LGE 257

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P         +    + +NQ+ + P  +  + K+L  +++  N +T+LP+++  
Sbjct: 258 NRFQIFPVEILELKNLLELNLY-YNQLVEFPKEV-GQLKSLKYLSLYHNQITTLPVEVTQ 315

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L EL+L  N+I+ L ++I  L NLE L LSNN L  LP  IG L+KL+ L+L  N+L
Sbjct: 316 LPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQL 375

Query: 462 ESLPNEIGFLKELQRLILQSN 482
            +LP EI  LK LQRL L SN
Sbjct: 376 TTLPKEIEQLKNLQRLELDSN 396



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 128/358 (35%), Positives = 191/358 (53%), Gaps = 4/358 (1%)

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L L F  +KT+   I  L NL  L +  N+   L  E+ +LK+L  L+L +N L  LPKE
Sbjct: 46  LDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKE 105

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           IG    L  L L  NELVN+P  +G   NL +L L  N+L  +P+ + +  +L E ++  
Sbjct: 106 IGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLS 165

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             L SLP  +   L S+ N+ L+ N+ T   S       ++ +++   N++  IP  I  
Sbjct: 166 NKLISLPTEI-EQLKSLKNLDLNHNELTTV-SKEVMLLETLENLDLRSNKLKTIPKEI-R 222

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           + K+L  + +  N LTSLP ++     L  LNLG N+      +I  L NL  L L  N 
Sbjct: 223 QLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQ 282

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L + P  +G L+ LK L L  N++ +LP E+  L +LQ L L  N++  LP+ I  L NL
Sbjct: 283 LVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNL 342

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            +LS+  N L ++P+EIG L+ L  L L +N  L  +P E+    NLQ + LD+ P+S
Sbjct: 343 EWLSLSNNKLNALPKEIGQLKKLQRLELGNNQ-LTTLPKEIEQLKNLQRLELDSNPIS 399



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 124/370 (33%), Positives = 191/370 (51%), Gaps = 26/370 (7%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L +LP++IG + NL  L L  N  T L   +  L+ L+ L+L +NKL  LP  + +L +L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           + L L  N +  +  +I    NL  L++ +NK+  LP E+G+L+NL  L L  N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
            EI     L  LDL HNEL  +   +  L  L  L L  N+L+++P+ + +   L    +
Sbjct: 173 TEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
            G  L+SLP  +   L ++  + L  N+F  +P         +    + +NQ+ + P  +
Sbjct: 233 TGNQLTSLPKEI-EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY-YNQLVEFPKEV 290

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             + K+L  +++  N +T+LP+++     L EL+L  N+I+ L ++I  L NLE L LSN
Sbjct: 291 -GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSN 349

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N                       KL +LP EIG LK+LQRL L +NQL +LP+ I  L 
Sbjct: 350 N-----------------------KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK 386

Query: 496 NLSYLSVGEN 505
           NL  L +  N
Sbjct: 387 NLQRLELDSN 396



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 161/290 (55%), Gaps = 3/290 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L  + + +LP  + +  +L++L L  NKL  LP +IG + NL  L L  N L 
Sbjct: 110 QNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLI 169

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP  +  L+ L+ LDL HN+L  +   V  L +L+ L LR N++KT+  +I+ L +L +
Sbjct: 170 SLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKV 229

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+ +L+NL TL+L  N  +  P EI     L+ L+L +N+LV  P  
Sbjct: 230 LMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKE 289

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L +L  L L +N++ ++P  +++   L E ++ G  ++ LP  +L  L ++  ++LS
Sbjct: 290 VGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEIL-QLKNLEWLSLS 348

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
            NK  A P     Q   +  +   +NQ+  +P  I  + KNL ++ +  N
Sbjct: 349 NNKLNALPK-EIGQLKKLQRLELGNNQLTTLPKEI-EQLKNLQRLELDSN 396



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 185/356 (51%), Gaps = 27/356 (7%)

Query: 206 KTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
           K +   +Q  +++  L +    ++ LP ++G+LKNL  LDL  N    L KEI     L 
Sbjct: 31  KNLAKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
            L+L +N+L  +P  +G L NL  L L  N L ++P+ + +  +L + N++   L+ LP 
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPK 150

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
            +   L ++  ++L  NK  + P+    Q  S+ +++  HN+                  
Sbjct: 151 EI-GQLQNLQELSLLSNKLISLPTE-IEQLKSLKNLDLNHNE------------------ 190

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
                 LT++  ++     L  L+L +N++  + ++I+ L +L+VL+L+ N L  LP  I
Sbjct: 191 ------LTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
             L+ LK L+L EN+ +  P EI  LK L  L L  NQLV  P+ +G L +L YLS+  N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 506 NLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            + ++P E+  L +L  L+L+ N  +  +P E+    NL+ +SL N  L+ +P EI
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGNK-ITILPKEILQLKNLEWLSLSNNKLNALPKEI 359



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 187/360 (51%), Gaps = 8/360 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  +  T L   + +L  L++L L  NKL  LP +IG + NL  L L  N L 
Sbjct: 64  KNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELV 123

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +   + L+ L+L +NKL  LP  + +L +L+ L L  N++ ++  +I+ L +L  
Sbjct: 124 NLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKN 183

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  +  E+  L+ L  LDL  N L+ +PKEI     L  L L  N+L ++P  
Sbjct: 184 LDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKE 243

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  NR +  P  + +  +L E N+    L   P   +  L S+  ++L 
Sbjct: 244 IEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKE-VGQLKSLKYLSLY 302

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P    TQ   +  ++   N+I  +P  I  + KNL  +++ +N L +LP ++G
Sbjct: 303 HNQITTLPV-EVTQLPDLQELHLSGNKITILPKEIL-QLKNLEWLSLSNNKLNALPKEIG 360

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL--KC-LDLE 457
               L  L LG NQ++ L ++I+ L NL+ L L +N +   P     +RKL  KC +D E
Sbjct: 361 QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKLLPKCEIDFE 418



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 157/310 (50%), Gaps = 27/310 (8%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           N+   L N  ++  L LS+  L+++P  + +  +L + ++ G   + L   +   L  + 
Sbjct: 32  NLAKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQ-LKDLQ 90

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + L+ NK T  P     Q  ++  ++   N++  +P  I  + KNL K+N+ +N LT L
Sbjct: 91  KLNLNNNKLTVLPKE-IGQLQNLQELSLHSNELVNLPKEI-GQFKNLQKLNLDNNKLTVL 148

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L EL+L +N++  L  +I+ L +L+ L L++N L  +   +  L  L+ LD
Sbjct: 149 PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLD 208

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ------- 508
           L  NKL+++P EI  LK L+ L+L  NQL SLP+ I  L NL  L++GEN  Q       
Sbjct: 209 LRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEIL 268

Query: 509 ----------------SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                             P+E+G L++L  L L  N  +  +P E+    +LQ + L   
Sbjct: 269 ELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ-ITTLPVEVTQLPDLQELHLSGN 327

Query: 553 PLSQIPSEIV 562
            ++ +P EI+
Sbjct: 328 KITILPKEIL 337



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 121/243 (49%), Gaps = 32/243 (13%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           NLDL+ + +T +   V  L  LE L L  NKL ++P +I  + +L  L L  N LTSLP 
Sbjct: 183 NLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPK 242

Query: 165 SLANLQQLRVLDL-----------------------RHNKLNELPMVVYKLTSLKILYLR 201
            +  LQ L+ L+L                        +N+L E P  V +L SLK L L 
Sbjct: 243 EIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLY 302

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N+I T+  ++  L +L  L +  NKI  LP E+ +LKNL  L L++N L  LPKEIG  
Sbjct: 303 HNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL-----ESVPETLSKCVHLNEFNVE 316
             L  L+L +N+L  +P  +  L NL RL L  N +     E + + L KC    E + E
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISPKEKERIRKLLPKC----EIDFE 418

Query: 317 GCA 319
           G  
Sbjct: 419 GGG 421


>gi|386766573|ref|NP_001247320.1| scribbled, isoform O [Drosophila melanogaster]
 gi|383292968|gb|AFH06637.1| scribbled, isoform O [Drosophila melanogaster]
          Length = 2515

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 207/424 (48%), Gaps = 51/424 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LGL++N +  LP 
Sbjct: 18  VDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPP 77

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            + N + L  LD+  N + ++P  +  L SL++     N I  +      L NL++L + 
Sbjct: 78  DIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLN 137

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE+ ++P  LG L
Sbjct: 138 DMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYL 197

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             L  L L +N+L+ +P  L                     GLL+ LT ++   +S N+ 
Sbjct: 198 PGLHELWLDHNQLQRLPPEL---------------------GLLTKLTYLD---VSENRL 233

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
              P                 N+I     G+ S    L+ +++  NLL +LP  +     
Sbjct: 234 EELP-----------------NEIS----GLVS----LTDLDLAQNLLEALPDGIAKLSR 268

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  L+++ N LE L
Sbjct: 269 LTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYL 328

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  +  L+ L  ++
Sbjct: 329 PLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQ-LKAVW 387

Query: 525 LNDN 528
           L++N
Sbjct: 388 LSEN 391



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|442621260|ref|NP_001262988.1| scribbled, isoform T [Drosophila melanogaster]
 gi|440217925|gb|AGB96368.1| scribbled, isoform T [Drosophila melanogaster]
          Length = 2444

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 211/435 (48%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F  C  + +  +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LG
Sbjct: 8   FKGCNRQ-VEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLG 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  + N + L  LD+  N + ++P  +  L SL++     N I  +     
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL++L + D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + ++P  LG L  L  L L +N+L+ +P  L                     GLL+ LT 
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPEL---------------------GLLTKLTY 225

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           ++   +S N+    P                 N+I     G+ S    L+ +++  NLL 
Sbjct: 226 LD---VSENRLEELP-----------------NEIS----GLVS----LTDLDLAQNLLE 257

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP  +     LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  
Sbjct: 258 ALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNN 317

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+++ N LE LP EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  
Sbjct: 318 LNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYS 377

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  ++L++N
Sbjct: 378 LVNLQ-LKAVWLSEN 391



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|418712107|ref|ZP_13272852.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421116140|ref|ZP_15576529.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410012306|gb|EKO70408.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410791374|gb|EKR85050.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 358

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 111/313 (35%), Positives = 177/313 (56%), Gaps = 5/313 (1%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L + + K++ LP ++G+LKNL  LDL+ N L  LPKEI     L  L L +N+   
Sbjct: 28  DVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKT 87

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
            P  +  L +L +L LS N+L  +P  + +  +L E N+    L ++   +   L ++  
Sbjct: 88  FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEI-EQLKNLQK 146

Query: 337 ITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
           + L  N+ TA+P   G  Q  ++ S+   +NQ+   P  I  + +NL ++ + +N LT+ 
Sbjct: 147 LYLDNNQLTAFPKEIGKLQ--NLKSLFLSNNQLTTFPKEI-GKLQNLQELYLSNNQLTTF 203

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L  L LG NQ++ +  +I  L  L+ L L  N L  +P  IG L+ L+ L 
Sbjct: 204 PKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLF 263

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L  N+ +++P E G LK L+ L L +NQL +LP+ IG L NL  L++  N L +IP+EIG
Sbjct: 264 LSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLITIPKEIG 323

Query: 516 TLENLHTLYLNDN 528
            L+NL TLYL +N
Sbjct: 324 QLQNLQTLYLRNN 336



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/319 (35%), Positives = 170/319 (53%), Gaps = 27/319 (8%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            L L+   L+ LP++IG    L  LDL  N+L+ +P  +  L NL  L L+YN+ ++ P+
Sbjct: 31  VLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPK 90

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + +                        L S++ + LS N+ T  P     Q  ++  +N
Sbjct: 91  EIEQ------------------------LKSLHKLYLSNNQLTILPVE-IGQLQNLQELN 125

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQ+  I   I  + KNL K+ + +N LT+ P ++G    L  L L  NQ++   ++I
Sbjct: 126 LWNNQLKTISKEI-EQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEI 184

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NL+ L LSNN L   P  IG L+KL+ L L +N+L ++PNEIG L++LQ L L  N
Sbjct: 185 GKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVN 244

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL ++P+ IG L NL  L +  N  ++IP E G L+NL  L L+ N  L  +P E+    
Sbjct: 245 QLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQ-LTALPKEIGKLK 303

Query: 543 NLQIMSLDNCPLSQIPSEI 561
           NL++++LD   L  IP EI
Sbjct: 304 NLKMLNLDANQLITIPKEI 322



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 180/337 (53%), Gaps = 26/337 (7%)

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
           ++  L L+E  L +LP+ +  L+ L++LDL  N+L  LP  + +L +L+ L+L +N+ KT
Sbjct: 28  DVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKT 87

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
              +I+ L +L  L + +N++  LP E+G+L+NL  L+L +N L+ + KEI     L  L
Sbjct: 88  FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKL 147

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
            L +N+L   P  +G L NL  L LS N+L + P+ + K  +L E  +    L++ P  +
Sbjct: 148 YLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI 207

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
              L  +  + L  N+ T  P                 N+I K+        + L ++N+
Sbjct: 208 -GKLQKLQWLGLGDNQLTTIP-----------------NEIGKL--------QKLQELNL 241

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
             N LT++P ++G    L  L L  NQ   +  +   L NL++L L  N L  LP  IG 
Sbjct: 242 DVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGK 301

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           L+ LK L+L+ N+L ++P EIG L+ LQ L L++NQ 
Sbjct: 302 LKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQF 338



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 166/311 (53%), Gaps = 3/311 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS+  +  LP  + +L +L+ L L  N+L  LP +I  + NL  L L  N   + P  
Sbjct: 32  LILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKE 91

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L  L L +N+L  LP+ + +L +L+ L L  N++KT+  +I+ L NL  L + +
Sbjct: 92  IEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDN 151

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++   P E+G+L+NL +L L++N L   PKEIG    L  L L +N+L   P  +G L 
Sbjct: 152 NQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQ 211

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L  N+L ++P  + K   L E N++   L+++P  +   L ++  + LS N+F 
Sbjct: 212 KLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEI-GQLQNLQVLFLSYNQFK 270

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++  ++ + NQ+  +P  I  + KNL  +N+  N L ++P ++G    L
Sbjct: 271 TIPVEF-GQLKNLKMLSLDANQLTALPKEI-GKLKNLKMLNLDANQLITIPKEIGQLQNL 328

Query: 406 TELNLGTNQIS 416
             L L  NQ S
Sbjct: 329 QTLYLRNNQFS 339



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 113/176 (64%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+ +L LS + +T  P  + KL +L+ELYL  N+L + P +IG +  L  LGL +N 
Sbjct: 163 KLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQ 222

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT++P+ +  LQ+L+ L+L  N+L  +P  + +L +L++L+L +N+ KT+  +   L NL
Sbjct: 223 LTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNL 282

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
            MLS+  N++  LP E+G+LKNL  L+L  N L  +PKEIG    L TL L++N+ 
Sbjct: 283 KMLSLDANQLTALPKEIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQF 338



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 131/249 (52%), Gaps = 1/249 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L+ +     P  +E+L  L +LYL  N+L  LP +IG + NL  L L  N L 
Sbjct: 73  KNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLK 132

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++   +  L+ L+ L L +N+L   P  + KL +LK L+L  N++ T   +I  L NL  
Sbjct: 133 TISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQE 192

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++   P E+G+L+ L  L L  N L  +P EIG    L  L+L  N+L  IP  
Sbjct: 193 LYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKE 252

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LSYN+ +++P    +  +L   +++   L++LP   +  L ++  + L 
Sbjct: 253 IGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE-IGKLKNLKMLNLD 311

Query: 341 RNKFTAYPS 349
            N+    P 
Sbjct: 312 ANQLITIPK 320



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 82/144 (56%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L++  QN +++ VL+LS   LK LP  IG L+ L+ LDL +N+L  LP EI  LK LQ L
Sbjct: 19  LTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 78

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L  NQ  + P+ I  L +L  L +  N L  +P EIG L+NL  L L +N  L  I  E
Sbjct: 79  FLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQ-LKTISKE 137

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    NLQ + LDN  L+  P EI
Sbjct: 138 IEQLKNLQKLYLDNNQLTAFPKEI 161



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 71/123 (57%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  +  N   ++ L L E KL++LP +IG LK LQ L L  NQL+ LP+ I  L NL 
Sbjct: 17  RDLTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQ 76

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N  ++ P+EI  L++LH LYL++N  L  +P E+    NLQ ++L N  L  I 
Sbjct: 77  ELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQ-LTILPVEIGQLQNLQELNLWNNQLKTIS 135

Query: 559 SEI 561
            EI
Sbjct: 136 KEI 138


>gi|24650330|ref|NP_524754.2| scribbled, isoform D [Drosophila melanogaster]
 gi|51701662|sp|Q7KRY7.1|LAP4_DROME RecName: Full=Protein lap4; AltName: Full=Protein scribble;
           AltName: Full=Protein smell-impaired
 gi|23172361|gb|AAF56598.2| scribbled, isoform D [Drosophila melanogaster]
          Length = 1851

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 211/435 (48%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F  C  + +  +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LG
Sbjct: 8   FKGCNRQ-VEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLG 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  + N + L  LD+  N + ++P  +  L SL++     N I  +     
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL++L + D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + ++P  LG L  L  L L +N+L+ +P  L                     GLL+ LT 
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPEL---------------------GLLTKLTY 225

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           ++   +S N+    P                 N+I     G+ S    L+ +++  NLL 
Sbjct: 226 LD---VSENRLEELP-----------------NEIS----GLVS----LTDLDLAQNLLE 257

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP  +     LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  
Sbjct: 258 ALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNN 317

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+++ N LE LP EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  
Sbjct: 318 LNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYS 377

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  ++L++N
Sbjct: 378 LVNLQ-LKAVWLSEN 391



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|24650336|ref|NP_733156.1| scribbled, isoform C [Drosophila melanogaster]
 gi|23172364|gb|AAN14078.1| scribbled, isoform C [Drosophila melanogaster]
          Length = 1247

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 207/424 (48%), Gaps = 51/424 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LGL++N +  LP 
Sbjct: 18  VDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPP 77

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            + N + L  LD+  N + ++P  +  L SL++     N I  +      L NL++L + 
Sbjct: 78  DIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLN 137

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE+ ++P  LG L
Sbjct: 138 DMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYL 197

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             L  L L +N+L+ +P  L                     GLL+ LT ++   +S N+ 
Sbjct: 198 PGLHELWLDHNQLQRLPPEL---------------------GLLTKLTYLD---VSENRL 233

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
              P                 N+I     G+ S    L+ +++  NLL +LP  +     
Sbjct: 234 EELP-----------------NEIS----GLVS----LTDLDLAQNLLEALPDGIAKLSR 268

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  L+++ N LE L
Sbjct: 269 LTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYL 328

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  +  L+ L  ++
Sbjct: 329 PLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQ-LKAVW 387

Query: 525 LNDN 528
           L++N
Sbjct: 388 LSEN 391



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 189/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG+   
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI--- 263

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
                                  + + +  +  + N++ ++        +N+ ++ + +N
Sbjct: 264 ----------------------AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|281362651|ref|NP_001163745.1| scribbled, isoform J [Drosophila melanogaster]
 gi|272477194|gb|ACZ95039.1| scribbled, isoform J [Drosophila melanogaster]
          Length = 2426

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 207/424 (48%), Gaps = 51/424 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LGL++N +  LP 
Sbjct: 18  VDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPP 77

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            + N + L  LD+  N + ++P  +  L SL++     N I  +      L NL++L + 
Sbjct: 78  DIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLN 137

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE+ ++P  LG L
Sbjct: 138 DMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYL 197

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             L  L L +N+L+ +P  L                     GLL+ LT ++   +S N+ 
Sbjct: 198 PGLHELWLDHNQLQRLPPEL---------------------GLLTKLTYLD---VSENRL 233

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
              P                 N+I     G+ S    L+ +++  NLL +LP  +     
Sbjct: 234 EELP-----------------NEIS----GLVS----LTDLDLAQNLLEALPDGIAKLSR 268

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  L+++ N LE L
Sbjct: 269 LTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYL 328

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  +  L+ L  ++
Sbjct: 329 PLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQ-LKAVW 387

Query: 525 LNDN 528
           L++N
Sbjct: 388 LSEN 391



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|6850952|emb|CAB71137.1| vartul-2 protein [Drosophila melanogaster]
          Length = 1247

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  ++ RH  L ++P  + + + +LK L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVNKRHCSLPQVPEEILRYSRTLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 198/403 (49%), Gaps = 50/403 (12%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           L+EL+L  N +  LP     +  L  LGL++N +  LP  + N + L  LD+  N + ++
Sbjct: 39  LKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  +  L SL++     N I  +      L NL++L + D  +  LP + G L  L +L+
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           L  N L+ LP+ I   T L  LDL  NE+ ++P  LG L  L  L L +N+L+ +P  L 
Sbjct: 159 LRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPEL- 217

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
                               GLL+ LT ++   +S N+    P                 
Sbjct: 218 --------------------GLLTKLTYLD---VSENRLEELP----------------- 237

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           N+I     G+ S    L+ +++  NLL +LP  +     LT L L  N++ +L++ + N 
Sbjct: 238 NEIS----GLVS----LTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC 289

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
            N++ L+L+ N L +LP+SIG + KL  L+++ N LE LP EIG    L  L L+ N+L 
Sbjct: 290 ENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLK 349

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            LP  +G+ T L  L V  N L  +P  +  L+ L  ++L++N
Sbjct: 350 KLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQ-LKAVWLSEN 391



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 189/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG+   
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI--- 263

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
                                  + + +  +  + N++ ++        +N+ ++ + +N
Sbjct: 264 ----------------------AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|386766575|ref|NP_733155.2| scribbled, isoform P [Drosophila melanogaster]
 gi|383292969|gb|AAN14077.2| scribbled, isoform P [Drosophila melanogaster]
          Length = 1729

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 211/435 (48%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F  C  + +  +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LG
Sbjct: 8   FKGCNRQ-VEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLG 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  + N + L  LD+  N + ++P  +  L SL++     N I  +     
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL++L + D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + ++P  LG L  L  L L +N+L+ +P  L                     GLL+ LT 
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPEL---------------------GLLTKLTY 225

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           ++   +S N+    P                 N+I     G+ S    L+ +++  NLL 
Sbjct: 226 LD---VSENRLEELP-----------------NEIS----GLVS----LTDLDLAQNLLE 257

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP  +     LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  
Sbjct: 258 ALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNN 317

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+++ N LE LP EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  
Sbjct: 318 LNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYS 377

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  ++L++N
Sbjct: 378 LVNLQ-LKAVWLSEN 391



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|320166678|gb|EFW43577.1| hypothetical protein CAOG_01621 [Capsaspora owczarzaki ATCC 30864]
          Length = 697

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 132/414 (31%), Positives = 215/414 (51%), Gaps = 7/414 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKL--ASLPSQIGYVTNLTCLGLAENSLTSLP 163
           LD+S +++  LP  +  L  L  L+   N+L  + L   IG +  LT + L  N L  LP
Sbjct: 64  LDISHNNLNALPQEIGNLVALTHLHASHNRLFYSPLTKAIGRLVMLTRIDLGFNQLEDLP 123

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           D   +L+ L+ +DL +N L  +P+ V K+  L+ L L  N+IK V P+I  L++L    +
Sbjct: 124 DEFGHLRNLKYIDLSNNDLKIIPVCVCKIAGLEYLNLEQNKIKLVPPEIGQLTSLKEWLL 183

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL-QHNELVNIPDMLG 282
            +N I +LP E+G L  LV + LA N+L ELPK  G    +  LDL ++N +V +P    
Sbjct: 184 NNNNINKLPAEVGSLSKLVKVTLAFNNLRELPKAAGEWVDIEELDLRENNNMVELPATSQ 243

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNV-EGCALSSLPDGLLSSLTSINNITLSR 341
               L +L +   +LE +P   S    LNE  + +   L  +P+  +  L S+  + LS 
Sbjct: 244 LWKKLRKLLMRNTKLEKLPAGFSAWTRLNELELKDNPQLQEIPED-IGQLNSLTRLDLSS 302

Query: 342 NKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
              T  P S        +  +         IP G+    +++ K+ +++N +  +P D+ 
Sbjct: 303 CCLTTLPDSVAQLTQLQLLDLRQNQLTTYCIPQGM-RNMQSMKKLYLQENRIEIVPDDVL 361

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L EL++ +N +  L++DI+ L  L  L LS N L+ LP+SIG L  L+ L++  N+
Sbjct: 362 EIKSLVELDMSSNTMYSLADDIRKLTMLTKLSLSFNALESLPASIGMLTNLQTLEVRNNQ 421

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           L +LP+EIG L+ L +L + +N++  LP ++  L+ L  L    N L   P +I
Sbjct: 422 LSALPDEIGDLRSLIKLDVSNNKISKLPTSMCQLSALQTLDTSHNQLVEPPADI 475



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 220/483 (45%), Gaps = 100/483 (20%)

Query: 191 KLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
           KL S + + L   ++K ++P I+ L  +  L + +N++  LP E+G L+ L  LD++HN+
Sbjct: 11  KLKSQQAVDLSKQQLKELNPAIERLERVEKLDVSNNELSSLPLEIGVLRTLKVLDISHNN 70

Query: 251 LEELPKEIGN-------------------------CTMLVTLDLQHNELVNIPDMLGNLI 285
           L  LP+EIGN                           ML  +DL  N+L ++PD  G+L 
Sbjct: 71  LNALPQEIGNLVALTHLHASHNRLFYSPLTKAIGRLVMLTRIDLGFNQLEDLPDEFGHLR 130

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL------------------ 327
           NL  + LS N L+ +P  + K   L   N+E   +  +P  +                  
Sbjct: 131 NLKYIDLSNNDLKIIPVCVCKIAGLEYLNLEQNKIKLVPPEIGQLTSLKEWLLNNNNINK 190

Query: 328 ----LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF-EHNQIDKIPYGIFSRAKNL 382
               + SL+ +  +TL+ N     P     ++  +  ++  E+N + ++P       K L
Sbjct: 191 LPAEVGSLSKLVKVTLAFNNLRELPKAA-GEWVDIEELDLRENNNMVELP-ATSQLWKKL 248

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTN-QISKLSEDIQNLVNLEVLVLSNNLLKKL 441
            K+ M++  L  LP     W  L EL L  N Q+ ++ EDI  L +L  L LS+  L  L
Sbjct: 249 RKLLMRNTKLEKLPAGFSAWTRLNELELKDNPQLQEIPEDIGQLNSLTRLDLSSCCLTTL 308

Query: 442 PSSIG-------------------------NLRKLKCLDLEENKLESLPNEIGFLKELQR 476
           P S+                          N++ +K L L+EN++E +P+++  +K L  
Sbjct: 309 PDSVAQLTQLQLLDLRQNQLTTYCIPQGMRNMQSMKKLYLQENRIEIVPDDVLEIKSLVE 368

Query: 477 LILQSN-----------------------QLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L + SN                        L SLP +IG LTNL  L V  N L ++P+E
Sbjct: 369 LDMSSNTMYSLADDIRKLTMLTKLSLSFNALESLPASIGMLTNLQTLEVRNNQLSALPDE 428

Query: 514 IGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYL 573
           IG L +L  L +++N  ++ +P  +   S LQ +   +  L + P++I+  G ++I++YL
Sbjct: 429 IGDLRSLIKLDVSNNK-ISKLPTSMCQLSALQTLDTSHNQLVEPPADIIKDGLAVILQYL 487

Query: 574 KMQ 576
           + +
Sbjct: 488 RTK 490



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 26/225 (11%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGN-KLASLPSQIGYVTNLTCLGLAENSLTSLPDSL 166
           +  + +  LP      T L EL L  N +L  +P  IG + +LT L L+   LT+LPDS+
Sbjct: 253 MRNTKLEKLPAGFSAWTRLNELELKDNPQLQEIPEDIGQLNSLTRLDLSSCCLTTLPDSV 312

Query: 167 A-------------------------NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
           A                         N+Q ++ L L+ N++  +P  V ++ SL  L + 
Sbjct: 313 AQLTQLQLLDLRQNQLTTYCIPQGMRNMQSMKKLYLQENRIEIVPDDVLEIKSLVELDMS 372

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N + ++  DI+ L+ L+ LS+  N +  LP  +G L NL TL++ +N L  LP EIG+ 
Sbjct: 373 SNTMYSLADDIRKLTMLTKLSLSFNALESLPASIGMLTNLQTLEVRNNQLSALPDEIGDL 432

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK 306
             L+ LD+ +N++  +P  +  L  L  L  S+N+L   P  + K
Sbjct: 433 RSLIKLDVSNNKISKLPTSMCQLSALQTLDTSHNQLVEPPADIIK 477



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 88/170 (51%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           +P  +  +  +++LYL  N++  +P  +  + +L  L ++ N++ SL D +  L  L  L
Sbjct: 333 IPQGMRNMQSMKKLYLQENRIEIVPDDVLEIKSLVELDMSSNTMYSLADDIRKLTMLTKL 392

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
            L  N L  LP  +  LT+L+ L +R N++  +  +I  L +L  L + +NKI +LP  +
Sbjct: 393 SLSFNALESLPASIGMLTNLQTLEVRNNQLSALPDEIGDLRSLIKLDVSNNKISKLPTSM 452

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
            +L  L TLD +HN L E P +I    + V L     + V +   LG + 
Sbjct: 453 CQLSALQTLDTSHNQLVEPPADIIKDGLAVILQYLRTKHVVVALALGAVF 502


>gi|67473011|ref|XP_652293.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
 gi|56469121|gb|EAL46907.1| leucine-rich repeat containing protein [Entamoeba histolytica
           HM-1:IMSS]
 gi|449706384|gb|EMD46243.1| oligodendrocytemyelin glycoprotein precursor, putative [Entamoeba
           histolytica KU27]
          Length = 508

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 236/476 (49%), Gaps = 14/476 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +++S  +++  P  + K           N   S+P  +  +  L  L L+ N +TS+PDS
Sbjct: 21  IEISGKNLSEFPKQISKCV-CTNFNASQNDFTSIPEDVCLMPKLEVLTLSNNRITSIPDS 79

Query: 166 LANLQQLRVLDLRHNKL--NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           +     LR L L  N L  + +   +   ++L+ L +  N+++++ P+I  L +L  L++
Sbjct: 80  IQKASNLRELYLGQNNLFYDGISSEIKMCSNLQRLDISMNKLESIPPEIGSLLSLQYLNI 139

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
            +N ++ LPPE+G L  L TL +  N + +LP EIGN   L  LDL +N++  +P+ L N
Sbjct: 140 SENNLKSLPPEIGMLDKLQTLLVNKNSIRKLPTEIGNLRSLYELDLSNNQMDLLPEELSN 199

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVE-GCALSSLPDGLLSSLTSINNITLSRN 342
           +I L  LR+ +N+L    + L+    L E + +    +  LP   L SL ++  + +   
Sbjct: 200 MIALKILRIGFNKLSGNIDVLTNFKFLVELDCQNNQGILELPP--LDSLQNLTRLVVKNL 257

Query: 343 KFTAYPSGGPTQFTSVYSINFEHN-QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
             T  P  G +    +  +N   N ++  +P  IF+   +L +++     +T LP ++ +
Sbjct: 258 PITNIP--GLSSLKMLCELNVRDNIKMKGMPEEIFNIV-SLQRLDFVGCNITVLPPNITS 314

Query: 402 WVGLTELNLGTNQI--SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
              L  L L  N +  S   E I  L N+  L +SNN +   P  + +L  +  LD+  N
Sbjct: 315 LTNLNILELAHNSLNESSFPEGISTLTNISKLSISNNQIHSYPQCLCDLTSIVDLDVSNN 374

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
            +  LP     L  +Q L +  N+L  LP ++G L +++YL    N L+S+P  IG L  
Sbjct: 375 LMVELPETFSNLTNVQNLTVAGNRLNRLPESLGRLISVTYLDARNNQLKSLPASIGDLRQ 434

Query: 520 LHTLYLNDNTCLNNIPFELA-LCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
           L+ L L  N  +  +P E+  L   LQ + L N PL   P E+V+ G   I +YLK
Sbjct: 435 LNRLELTQNM-IPVLPVEMGQLDGILQTIELTNNPLVVPPKEVVIKGAHEICKYLK 489



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 207/408 (50%), Gaps = 39/408 (9%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           I  E   C   N+  LD+S + +  +PP +  L  L+ L +  N L SLP +IG +  L 
Sbjct: 101 ISSEIKMCS--NLQRLDISMNKLESIPPEIGSLLSLQYLNISENNLKSLPPEIGMLDKLQ 158

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L + +NS+  LP  + NL+ L  LDL +N+++ LP  +  + +LKIL + FN++     
Sbjct: 159 TLLVNKNSIRKLPTEIGNLRSLYELDLSNNQMDLLPEELSNMIALKILRIGFNKLSG--- 215

Query: 211 DIQYLSNLSMLSMRDNK----IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
           +I  L+N   L   D +    I ELPP L  L+NL  L + +  +  +P  + +  ML  
Sbjct: 216 NIDVLTNFKFLVELDCQNNQGILELPP-LDSLQNLTRLVVKNLPITNIPG-LSSLKMLCE 273

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           L+++ N                       +++ +PE +   V L   +  GC ++ LP  
Sbjct: 274 LNVRDNI----------------------KMKGMPEEIFNIVSLQRLDFVGCNITVLPPN 311

Query: 327 LLSSLTSINNITLSRNKF--TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
            ++SLT++N + L+ N    +++P G  T  T++  ++  +NQI   P        ++  
Sbjct: 312 -ITSLTNLNILELAHNSLNESSFPEGIST-LTNISKLSISNNQIHSYPQ-CLCDLTSIVD 368

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
           +++ +NL+  LP        +  L +  N++++L E +  L+++  L   NN LK LP+S
Sbjct: 369 LDVSNNLMVELPETFSNLTNVQNLTVAGNRLNRLPESLGRLISVTYLDARNNQLKSLPAS 428

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKE-LQRLILQSNQLVSLPRAI 491
           IG+LR+L  L+L +N +  LP E+G L   LQ + L +N LV  P+ +
Sbjct: 429 IGDLRQLNRLELTQNMIPVLPVEMGQLDGILQTIELTNNPLVVPPKEV 476


>gi|124002029|ref|ZP_01686883.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992495|gb|EAY31840.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 395

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 185/328 (56%), Gaps = 10/328 (3%)

Query: 206 KTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
           K +   +   +N  +LS+++  ++++P E+G+LK L  LDL  N ++ LP  IG+   L 
Sbjct: 40  KVIDDAVHDAANAYLLSLKNKGLKKVPKEIGKLKKLQMLDLGLNQIDTLPPCIGSLKFLQ 99

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
            LDL  +++  +PD +GNL++L  L + YN+L  +P+++ K   L   ++EG  L+ +P 
Sbjct: 100 ILDLWGDKIAYLPDTIGNLVHLKFLYMDYNKLVKLPKSIKKLTQLQVIDLEGNKLTRIPS 159

Query: 326 GLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
             + +L S+  + L +N  +  PS  G  +Q      ++ + NQI +IPY I    ++L 
Sbjct: 160 E-IGALKSLRVLDLEKNGISTIPSQLGNLSQLE---VLDLDSNQIKQIPYAI-GGLRSLK 214

Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS---KLSEDIQNLVNLEVLVLSNNLLKK 440
            + +++NL+ SLP +L   V L  L +  N++      S  +  L +L+ L LS N L +
Sbjct: 215 YLYLRNNLIDSLPDELKNMVKLEHLYVSNNRLDSSFAKSRFLGKLQSLKTLDLSKNKLVR 274

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           LP  I  L+ LK L L  N+L++LP+ +G ++ L+ L L++NQL  LP+++  L  L  L
Sbjct: 275 LPQDIVQLKNLKTLILHNNQLQALPDSLGEIENLEELDLRNNQLTVLPKSVLQLAKLKKL 334

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDN 528
            +  N L  +PEEI  ++NL  L L  N
Sbjct: 335 ILRNNQLTVLPEEIAQMKNLKELDLRGN 362



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 168/324 (51%), Gaps = 23/324 (7%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L  +P +IG +  L  L L  N + +LP  + +L+ L++LDL  +K+  LP  +  L  L
Sbjct: 62  LKKVPKEIGKLKKLQMLDLGLNQIDTLPPCIGSLKFLQILDLWGDKIAYLPDTIGNLVHL 121

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           K LY+ +N++  +   I+ L+ L ++ +  NK+  +P E+G LK+L  LDL  N +  +P
Sbjct: 122 KFLYMDYNKLVKLPKSIKKLTQLQVIDLEGNKLTRIPSEIGALKSLRVLDLEKNGISTIP 181

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
            ++GN + L  LDL  N++  IP  +G L +L  L L  N ++S+P+ L   V L    V
Sbjct: 182 SQLGNLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLRNNLIDSLPDELKNMVKLEHLYV 241

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
               L S               + ++++F         +  S+ +++   N++ ++P  I
Sbjct: 242 SNNRLDS---------------SFAKSRFLG-------KLQSLKTLDLSKNKLVRLPQDI 279

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             + KNL  + + +N L +LP  LG    L EL+L  NQ++ L + +  L  L+ L+L N
Sbjct: 280 V-QLKNLKTLILHNNQLQALPDSLGEIENLEELDLRNNQLTVLPKSVLQLAKLKKLILRN 338

Query: 436 NLLKKLPSSIGNLRKLKCLDLEEN 459
           N L  LP  I  ++ LK LDL  N
Sbjct: 339 NQLTVLPEEIAQMKNLKELDLRGN 362



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 169/345 (48%), Gaps = 29/345 (8%)

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           D++ +     +L L++  L ++P  + KL  L++L L  N+I T+ P I  L  L +L +
Sbjct: 44  DAVHDAANAYLLSLKNKGLKKVPKEIGKLKKLQMLDLGLNQIDTLPPCIGSLKFLQILDL 103

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
             +KI  LP  +G L +L  L + +N L +LPK I   T L  +DL+ N+L  IP  +G 
Sbjct: 104 WGDKIAYLPDTIGNLVHLKFLYMDYNKLVKLPKSIKKLTQLQVIDLEGNKLTRIPSEIGA 163

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L +L  L L  N + ++P  L     L   +++   +  +P                   
Sbjct: 164 LKSLRVLDLEKNGISTIPSQLGNLSQLEVLDLDSNQIKQIP------------------- 204

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD---LG 400
              Y  GG      +Y     +N ID +P  + +  K L  + + +N L S       LG
Sbjct: 205 ---YAIGGLRSLKYLY---LRNNLIDSLPDELKNMVK-LEHLYVSNNRLDSSFAKSRFLG 257

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ +L +DI  L NL+ L+L NN L+ LP S+G +  L+ LDL  N+
Sbjct: 258 KLQSLKTLDLSKNKLVRLPQDIVQLKNLKTLILHNNQLQALPDSLGEIENLEELDLRNNQ 317

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
           L  LP  +  L +L++LIL++NQL  LP  I  + NL  L +  N
Sbjct: 318 LTVLPKSVLQLAKLKKLILRNNQLTVLPEEIAQMKNLKELDLRGN 362



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 153/291 (52%), Gaps = 6/291 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL  + I  LPP +  L  L+ L L+G+K+A LP  IG + +L  L +  N L  LP S
Sbjct: 78  LDLGLNQIDTLPPCIGSLKFLQILDLWGDKIAYLPDTIGNLVHLKFLYMDYNKLVKLPKS 137

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L QL+V+DL  NKL  +P  +  L SL++L L  N I T+   +  LS L +L +  
Sbjct: 138 IKKLTQLQVIDLEGNKLTRIPSEIGALKSLRVLDLEKNGISTIPSQLGNLSQLEVLDLDS 197

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL---VNIPDMLG 282
           N+I+++P  +G L++L  L L +N ++ LP E+ N   L  L + +N L         LG
Sbjct: 198 NQIKQIPYAIGGLRSLKYLYLRNNLIDSLPDELKNMVKLEHLYVSNNRLDSSFAKSRFLG 257

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L +L  L LS N+L  +P+ + +  +L    +    L +LPD  L  + ++  + L  N
Sbjct: 258 KLQSLKTLDLSKNKLVRLPQDIVQLKNLKTLILHNNQLQALPDS-LGEIENLEELDLRNN 316

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + T  P     Q   +  +   +NQ+  +P  I ++ KNL +++++ N  T
Sbjct: 317 QLTVLPK-SVLQLAKLKKLILRNNQLTVLPEEI-AQMKNLKELDLRGNFTT 365



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 115/199 (57%), Gaps = 3/199 (1%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           NQID +P  I S  K L  +++  + +  LP  +G  V L  L +  N++ KL + I+ L
Sbjct: 83  NQIDTLPPCIGS-LKFLQILDLWGDKIAYLPDTIGNLVHLKFLYMDYNKLVKLPKSIKKL 141

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
             L+V+ L  N L ++PS IG L+ L+ LDLE+N + ++P+++G L +L+ L L SNQ+ 
Sbjct: 142 TQLQVIDLEGNKLTRIPSEIGALKSLRVLDLEKNGISTIPSQLGNLSQLEVLDLDSNQIK 201

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE--LALCSN 543
            +P AIG L +L YL +  N + S+P+E+  +  L  LY+++N   ++      L    +
Sbjct: 202 QIPYAIGGLRSLKYLYLRNNLIDSLPDELKNMVKLEHLYVSNNRLDSSFAKSRFLGKLQS 261

Query: 544 LQIMSLDNCPLSQIPSEIV 562
           L+ + L    L ++P +IV
Sbjct: 262 LKTLDLSKNKLVRLPQDIV 280



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 110/183 (60%), Gaps = 2/183 (1%)

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
            + Y ++ ++  + K+P  I  + K L  +++  N + +LP  +G+   L  L+L  ++I
Sbjct: 50  ANAYLLSLKNKGLKKVPKEI-GKLKKLQMLDLGLNQIDTLPPCIGSLKFLQILDLWGDKI 108

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           + L + I NLV+L+ L +  N L KLP SI  L +L+ +DLE NKL  +P+EIG LK L+
Sbjct: 109 AYLPDTIGNLVHLKFLYMDYNKLVKLPKSIKKLTQLQVIDLEGNKLTRIPSEIGALKSLR 168

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
            L L+ N + ++P  +G+L+ L  L +  N ++ IP  IG L +L  LYL +N  ++++P
Sbjct: 169 VLDLEKNGISTIPSQLGNLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLRNN-LIDSLP 227

Query: 536 FEL 538
            EL
Sbjct: 228 DEL 230



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 1/199 (0%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            E  ++ K+       A N   +++K+  L  +P ++G    L  L+LG NQI  L   I
Sbjct: 33  LEQKELYKVIDDAVHDAANAYLLSLKNKGLKKVPKEIGKLKKLQMLDLGLNQIDTLPPCI 92

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            +L  L++L L  + +  LP +IGNL  LK L ++ NKL  LP  I  L +LQ + L+ N
Sbjct: 93  GSLKFLQILDLWGDKIAYLPDTIGNLVHLKFLYMDYNKLVKLPKSIKKLTQLQVIDLEGN 152

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           +L  +P  IG L +L  L + +N + +IP ++G L  L  L L+ N  +  IP+ +    
Sbjct: 153 KLTRIPSEIGALKSLRVLDLEKNGISTIPSQLGNLSQLEVLDLDSNQ-IKQIPYAIGGLR 211

Query: 543 NLQIMSLDNCPLSQIPSEI 561
           +L+ + L N  +  +P E+
Sbjct: 212 SLKYLYLRNNLIDSLPDEL 230



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 68/116 (58%)

Query: 88  DLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVT 147
           D +  K     K +++  LDLSK+ +  LP  + +L +L+ L L+ N+L +LP  +G + 
Sbjct: 247 DSSFAKSRFLGKLQSLKTLDLSKNKLVRLPQDIVQLKNLKTLILHNNQLQALPDSLGEIE 306

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFN 203
           NL  L L  N LT LP S+  L +L+ L LR+N+L  LP  + ++ +LK L LR N
Sbjct: 307 NLEELDLRNNQLTVLPKSVLQLAKLKKLILRNNQLTVLPEEIAQMKNLKELDLRGN 362


>gi|281362655|ref|NP_001163746.1| scribbled, isoform L [Drosophila melanogaster]
 gi|272477196|gb|ACZ95040.1| scribbled, isoform L [Drosophila melanogaster]
          Length = 2585

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 207/424 (48%), Gaps = 51/424 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LGL++N +  LP 
Sbjct: 18  VDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPP 77

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            + N + L  LD+  N + ++P  +  L SL++     N I  +      L NL++L + 
Sbjct: 78  DIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLN 137

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE+ ++P  LG L
Sbjct: 138 DMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYL 197

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             L  L L +N+L+ +P  L                     GLL+ LT ++   +S N+ 
Sbjct: 198 PGLHELWLDHNQLQRLPPEL---------------------GLLTKLTYLD---VSENRL 233

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
              P                 N+I     G+ S    L+ +++  NLL +LP  +     
Sbjct: 234 EELP-----------------NEIS----GLVS----LTDLDLAQNLLEALPDGIAKLSR 268

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  L+++ N LE L
Sbjct: 269 LTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYL 328

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  +  L+ L  ++
Sbjct: 329 PLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQ-LKAVW 387

Query: 525 LNDN 528
           L++N
Sbjct: 388 LSEN 391



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|421118980|ref|ZP_15579307.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348320|gb|EKO99146.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 377

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 126/367 (34%), Positives = 187/367 (50%), Gaps = 49/367 (13%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N  ++RVLDL   +L  LP+ + KL +L+ LYL +N++                
Sbjct: 38  LTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTV-------------- 83

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
                    LP E+ +LKNL  L L  N L  LPKEI     L  LDL +N+L  +P  +
Sbjct: 84  ---------LPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLSNNQLTVLPQEI 134

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L L  NRL ++ + + +  +L   ++    L++LP+ +   L ++ ++ LS 
Sbjct: 135 EQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEI-EQLKNLKSLYLSE 193

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P                             + +NL  + + +N +T LP ++  
Sbjct: 194 NQFATFPKE-------------------------IGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L L  NQ+  L ++I+ L NL+ L LS N L  LP  +G L  L+ LDL  N+L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
           ++LP EI  LK LQ L L +NQL  LP+ IG L NL +LS+  N L ++P EI  L+NL 
Sbjct: 289 KTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQ 348

Query: 522 TLYLNDN 528
           TLYLN+N
Sbjct: 349 TLYLNNN 355



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/331 (34%), Positives = 182/331 (54%), Gaps = 26/331 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + KL +L+ LYL+ N+L  LP +I  + NL  L L  N LT+LP  
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VLDL +N+L  LP  + +L +L++LYL  NR+ T+  DI+ L NL  L + +
Sbjct: 111 IEQLKNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+ +LKNL +L L+ N     PKEIG    L  L L +N++  +P+ +  L 
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLK 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LS N+L ++P+ + +                        L ++ ++ LS N+ T
Sbjct: 231 KLQYLYLSDNQLITLPKEIEQ------------------------LKNLKSLDLSYNQLT 266

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++ +++  +NQ+  +P  I  + KNL  + + +N LT LP ++G    L
Sbjct: 267 ILPKEV-GQLENLQTLDLRNNQLKTLPKEI-EQLKNLQTLFLSNNQLTILPQEIGKLKNL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
             L+L  NQ++ L  +I+ L NL+ L L+NN
Sbjct: 325 LWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 111/313 (35%), Positives = 165/313 (52%), Gaps = 4/313 (1%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            LDL+   L+ LP EIG    L  L L +N+L  +P  +  L NL  L L  NRL ++P+
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 109

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + +  +L   ++    L+ LP   +  L ++  + L  N+ T   S    Q  ++ S++
Sbjct: 110 EIEQLKNLQVLDLSNNQLTVLPQE-IEQLKNLQLLYLHSNRLTTL-SKDIEQLQNLKSLD 167

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQ+  +P  I  + KNL  + + +N   + P ++G    L  L L  NQI+ L  +I
Sbjct: 168 LSNNQLTTLPNEI-EQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEI 226

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L  L+ L LS+N L  LP  I  L+ LK LDL  N+L  LP E+G L+ LQ L L++N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNN 286

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL +LP+ I  L NL  L +  N L  +P+EIG L+NL  L L  N  L  +P E+    
Sbjct: 287 QLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQ-LTTLPNEIEQLK 345

Query: 543 NLQIMSLDNCPLS 555
           NLQ + L+N   S
Sbjct: 346 NLQTLYLNNNQFS 358



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 107/309 (34%), Positives = 154/309 (49%), Gaps = 27/309 (8%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  LDL   EL  +P  +G L NL RL L YN+L  +P+ + +  +L  
Sbjct: 37  DLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQL 96

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
             +    L++LP  +   L ++  + LS N+ T  P                        
Sbjct: 97  LYLRSNRLTTLPKEI-EQLKNLQVLDLSNNQLTVLPQE---------------------- 133

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
                + KNL  + +  N LT+L  D+     L  L+L  NQ++ L  +I+ L NL+ L 
Sbjct: 134 ---IEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 190

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           LS N     P  IG L+ LK L L  N++  LPNEI  LK+LQ L L  NQL++LP+ I 
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIE 250

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L +  N L  +P+E+G LENL TL L +N  L  +P E+    NLQ + L N 
Sbjct: 251 QLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLSNN 309

Query: 553 PLSQIPSEI 561
            L+ +P EI
Sbjct: 310 QLTILPQEI 318



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 148/246 (60%), Gaps = 1/246 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDLS + +T LP  +E+L +L+ LYL+ N+L +L   I  + NL  L L+ N LT
Sbjct: 115 KNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  L+ L+ L L  N+    P  + +L +LK+L+L  N+I  +  +I  L  L  
Sbjct: 175 TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQY 234

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN++  LP E+ +LKNL +LDL++N L  LPKE+G    L TLDL++N+L  +P  
Sbjct: 235 LYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L LS N+L  +P+ + K  +L   ++    L++LP+  +  L ++  + L+
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNE-IEQLKNLQTLYLN 353

Query: 341 RNKFTA 346
            N+F++
Sbjct: 354 NNQFSS 359



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N  +++ LDL   +L++LP EIG LK LQRL L  NQL  LP+ I  L NL 
Sbjct: 36  RDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 95

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N L ++P+EI  L+NL  L L++N  L  +P E+    NLQ++ L +  L+ + 
Sbjct: 96  LLYLRSNRLTTLPKEIEQLKNLQVLDLSNNQ-LTVLPQEIEQLKNLQLLYLHSNRLTTLS 154

Query: 559 SEI 561
            +I
Sbjct: 155 KDI 157



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 8/137 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + +  LP  +E+L +L+ L L  N+L  LP ++G + NL  L L  N L +LP  
Sbjct: 235 LYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L +N+L  LP  + KL +L  L L +N++ T+  +I+ L NL  L + +
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 226 N--------KIRELPPE 234
           N        +IR+L P+
Sbjct: 355 NQFSSQEKKRIRKLLPK 371


>gi|363736689|ref|XP_003641743.1| PREDICTED: leucine-rich repeat-containing protein 7 [Gallus gallus]
          Length = 1455

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 193/386 (50%), Gaps = 28/386 (7%)

Query: 174 VLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
           VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  LP
Sbjct: 26  VLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLP 85

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             +  L NL  LD++ N +++ P+ I  C  L  ++   N +  +PD    L+NLT+L L
Sbjct: 86  TTIASLVNLRELDISKNGIQDFPENIKCCKCLTIIEASVNPVSKLPDGFTQLLNLTQLYL 145

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           +   LE +P    + V L    +    L +LP  +   LT +  + L  N+F+  P    
Sbjct: 146 NDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLTQLERLDLGNNEFSELPE--- 201

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                                 +  + +NL ++ M +N L  LP  +G    L  L++  
Sbjct: 202 ----------------------VLEQIQNLKELWMDNNSLQILPGSIGKLKQLVYLDMSK 239

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N+I  +  DI     LE L+LS+N+L++LP SIG L++L  L +++N+L  LPN IG L 
Sbjct: 240 NRIETVDLDISGCEGLEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTILPNAIGNLS 299

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            L+      N+L SLP  IG+L NL  L+V EN L  +P EIG+ +N+  + L  N  L 
Sbjct: 300 LLEEFDCSCNELESLPSTIGYLHNLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK-LE 358

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIP 558
            +P E+     L++++L +  L  +P
Sbjct: 359 FLPDEIGQMQKLRVLNLSDNRLKNLP 384



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 197/416 (47%), Gaps = 27/416 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE +  LD S   +  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 17  FRGEEEIVSVLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSI 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L+SLP ++A+L  LR LD+  N + + P  +     L I+    N +  +      
Sbjct: 77  PDNDLSSLPTTIASLVNLRELDISKNGIQDFPENIKCCKCLTIIEASVNPVSKLPDGFTQ 136

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +   T L  LDL +NE 
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEF 196

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+ +P ++ K   L   ++    + ++ D  +S    +
Sbjct: 197 SELPEVLEQIQNLKELWMDNNSLQILPGSIGKLKQLVYLDMSKNRIETV-DLDISGCEGL 255

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                    D I  G+  R   L+ + + DN LT 
Sbjct: 256 EDLLLSSNMLQQLP--------------------DSI--GLLKR---LTTLKVDDNQLTI 290

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    L E +   N++  L   I  L NL  L +  N L +LP  IG+ + +  +
Sbjct: 291 LPNAIGNLSLLEEFDCSCNELESLPSTIGYLHNLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
            L  NKLE LP+EIG +++L+ L L  N+L +LP     L  L+ L + +N  +++
Sbjct: 351 SLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPFTFTKLKELAALWLSDNQSKAL 406



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 178/368 (48%), Gaps = 51/368 (13%)

Query: 218 LSMLSMRDNKIRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           +S+L      ++++P E+    + L  L L  N +EELPK++ NC  L  L +  N+L +
Sbjct: 24  VSVLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSS 83

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  + +L+NL  L +S N ++  PE +  C  L         +S LPDG          
Sbjct: 84  LPTTIASLVNLRELDISKNGIQDFPENIKCCKCLTIIEASVNPVSKLPDGF--------- 134

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
                           TQ  ++  +      ++ +P   F R   L  + +++N L +LP
Sbjct: 135 ----------------TQLLNLTQLYLNDAFLEFLPAN-FGRLVKLRILELRENHLKTLP 177

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +     L  L+LG N+ S+L E ++ + NL+ L + NN L+ LP SIG L++L  LD+
Sbjct: 178 KSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNSLQILPGSIGKLKQLVYLDM 237

Query: 457 EENKLES-----------------------LPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
            +N++E+                       LP+ IG LK L  L +  NQL  LP AIG+
Sbjct: 238 SKNRIETVDLDISGCEGLEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTILPNAIGN 297

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L+ L       N L+S+P  IG L NL TL +++N  L  +P E+  C N+ +MSL +  
Sbjct: 298 LSLLEEFDCSCNELESLPSTIGYLHNLRTLAVDEN-FLPELPREIGSCKNVTVMSLRSNK 356

Query: 554 LSQIPSEI 561
           L  +P EI
Sbjct: 357 LEFLPDEI 364



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 139/292 (47%), Gaps = 34/292 (11%)

Query: 88  DLNIEKEFLRCKEENI------LNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L+I K  ++   ENI        ++ S + ++ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDISKNGIQDFPENIKCCKCLTIIEASVNPVSKLPDGFTQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL- 200
             G +  L  L L EN L +LP S+  L QL  LDL +N+ +ELP V+ ++ +LK L++ 
Sbjct: 156 NFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMD 215

Query: 201 ----------------------RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGEL 238
                                   NRI+TV  DI     L  L +  N +++LP  +G L
Sbjct: 216 NNSLQILPGSIGKLKQLVYLDMSKNRIETVDLDISGCEGLEDLLLSSNMLQQLPDSIGLL 275

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           K L TL +  N L  LP  IGN ++L   D   NEL ++P  +G L NL  L +  N L 
Sbjct: 276 KRLTTLKVDDNQLTILPNAIGNLSLLEEFDCSCNELESLPSTIGYLHNLRTLAVDENFLP 335

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTAYP 348
            +P  +  C ++   ++    L  LPD  G +  L  +N   LS N+    P
Sbjct: 336 ELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLN---LSDNRLKNLP 384


>gi|386766567|ref|NP_001247318.1| scribbled, isoform K [Drosophila melanogaster]
 gi|383292966|gb|AFH06635.1| scribbled, isoform K [Drosophila melanogaster]
          Length = 2331

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 207/424 (48%), Gaps = 51/424 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LGL++N +  LP 
Sbjct: 18  VDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPP 77

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            + N + L  LD+  N + ++P  +  L SL++     N I  +      L NL++L + 
Sbjct: 78  DIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLN 137

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE+ ++P  LG L
Sbjct: 138 DMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYL 197

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             L  L L +N+L+ +P  L                     GLL+ LT ++   +S N+ 
Sbjct: 198 PGLHELWLDHNQLQRLPPEL---------------------GLLTKLTYLD---VSENRL 233

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
              P                 N+I     G+ S    L+ +++  NLL +LP  +     
Sbjct: 234 EELP-----------------NEIS----GLVS----LTDLDLAQNLLEALPDGIAKLSR 268

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  L+++ N LE L
Sbjct: 269 LTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYL 328

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  +  L+ L  ++
Sbjct: 329 PLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQ-LKAVW 387

Query: 525 LNDN 528
           L++N
Sbjct: 388 LSEN 391



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|195061568|ref|XP_001996020.1| GH14049 [Drosophila grimshawi]
 gi|193891812|gb|EDV90678.1| GH14049 [Drosophila grimshawi]
          Length = 744

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 154/564 (27%), Positives = 265/564 (46%), Gaps = 63/564 (11%)

Query: 73  NKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLY 132
           N+    +K+ + ++  +N E  +    +  I NLDLS +++TH+ P +E L  L  L L+
Sbjct: 185 NEADADSKRADLVKLSINEEDAWW--NQVPINNLDLSSNALTHISPKIENLLTLTVLQLH 242

Query: 133 GNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKL 192
            N L SLP +IG +  L  L L+ N L+ LP    +L +LR L++ HN+  EL   +  L
Sbjct: 243 DNALVSLPPEIGKLEKLVRLNLSHNKLSELPAEFYSLPELRHLNISHNEFLELNPDISNL 302

Query: 193 TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLE 252
             L+ L    N I TV   I +L  L+ L + +N I+ELP ++  +++L  LDL  N L 
Sbjct: 303 HMLEFLDAGNNNINTVPGGIGFLVRLTALLLANNHIKELPTDIVNMRSLQKLDLMKNDLI 362

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETL-SKCVHLN 311
            LP+++G    L  L +QHN++  +P   GN + L+ L  S N +ESVP+ L +   HL 
Sbjct: 363 ALPEDMGLMRKLECLYVQHNDIKELPTFEGNEM-LSELHASNNFIESVPQDLCANLPHLK 421

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP--------------SGGPTQF-- 355
            F++    ++ LPD +   + ++N + L+ N  +  P               G P +   
Sbjct: 422 IFDLRDNKITQLPDEI-CLMRNLNRLDLTNNSISVLPVTLSSLAHLISLQVDGNPIKTIR 480

Query: 356 ----------------------------------TSVYSINFEHNQIDKIPYGIFSRAKN 381
                                              S  S       ++ +P  +  R K 
Sbjct: 481 RDILQCGTARILKTLHDRAQAKIREEGGADEEAPCSSRSSTGSQGAMNNLPNNMTDRYKL 540

Query: 382 LSKVNMKDNL--LTSLP---LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV-LVLSN 435
                +  NL  LT++P     L +   +  ++   NQ+  L + +Q + NL   LVL++
Sbjct: 541 RHTRTLAVNLENLTNVPEHVFQLASSENVHVVDFARNQLGSLPQGLQLMSNLVTELVLAH 600

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N++  +P+ I    ++  L+L  N++  LPNE G L  L+ L + +N+   LP+ +  L 
Sbjct: 601 NVIASVPTFITQFTRITFLNLSNNQIRDLPNEFGVLNTLRELNIANNRFEFLPKGLYELQ 660

Query: 496 NLSYLSVGENNLQSI-PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
            L  L   EN+++++  + +  +  L TL L +N  +  IP  L   +N+  + L   P 
Sbjct: 661 GLEILIASENHIKALNVDGLKGMPRLSTLDLRNND-IEFIPPILGNLTNITHLELVGNPF 719

Query: 555 SQIPSEIVVGGPSLIIRYLKMQGP 578
            Q   +I++ G   I+ YL+ + P
Sbjct: 720 RQPRHQILMKGTDAIMSYLRDRIP 743


>gi|421094569|ref|ZP_15555285.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362631|gb|EKP13668.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
          Length = 379

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 116/331 (35%), Positives = 185/331 (55%), Gaps = 6/331 (1%)

Query: 200 LRFNRIKTVHPDIQYLSN---LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPK 256
           L+   I T H   + L N   + +L + + ++  LP E+GEL+NL  L+L  N L  LP 
Sbjct: 23  LKAQEIGTYHNLTEALQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPN 82

Query: 257 EIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE 316
           EIG    L  L+L  N+   +P+ +G L NL  L LS+N+L + P  + +  +L E ++ 
Sbjct: 83  EIGKLQNLQLLNLDKNQFTALPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLS 142

Query: 317 GCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIF 376
              L++LP+ +   L  +  ++L  N+     S        +  ++   NQ+  +P  I 
Sbjct: 143 VNQLTTLPNDI-GKLQKLERLSLIENQLKTL-SKEIGYLKELQVLDLNGNQLTTLPKEI- 199

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
              KNL ++++  N L +LP D+G    L  L++G+NQ+  L ++I  L NL+ L L  N
Sbjct: 200 GELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYTN 259

Query: 437 LLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
            LK LP  IG L+ L  LDL  N+L++LP EIG L+ L  L L++N+L +LP+ IG L +
Sbjct: 260 QLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELKTLPKEIGELQS 319

Query: 497 LSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
           L+ L +  N L+++P EIG L+ L  L+L+D
Sbjct: 320 LTVLDLRNNELKTLPNEIGKLKELRKLHLDD 350



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/216 (39%), Positives = 130/216 (60%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L LS + +T LP  + KL  LE L L  N+L +L  +IGY+  L  L L  N LT
Sbjct: 134 QNLRELHLSVNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLT 193

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  L+ LR L L  N+L  LP  + +L +L++L++  N++KT+  +I  L NL  
Sbjct: 194 TLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQE 253

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LP E+GEL+NL  LDL  N L+ LPKEIG    L  LDL++NEL  +P  
Sbjct: 254 LYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELKTLPKE 313

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE 316
           +G L +LT L L  N L+++P  + K   L + +++
Sbjct: 314 IGELQSLTVLDLRNNELKTLPNEIGKLKELRKLHLD 349



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/227 (39%), Positives = 135/227 (59%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L LS + +T  P  + +L +L EL+L  N+L +LP+ IG +  L  L L EN 
Sbjct: 109 KLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGKLQKLERLSLIENQ 168

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L +L   +  L++L+VLDL  N+L  LP  + +L +L+ L+L  N++KT+  DI  L NL
Sbjct: 169 LKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNL 228

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            +L +  N+++ LP E+GEL+NL  L L  N L+ LPKEIG    L  LDL  NEL  +P
Sbjct: 229 QVLHIGSNQLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLP 288

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
             +G L NLT L L  N L+++P+ + +   L   ++    L +LP+
Sbjct: 289 KEIGELQNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPN 335



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 180/353 (50%), Gaps = 49/353 (13%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS   +T LP  + +L +L  L LY N+L +LP++IG + NL  L L +N  T+LP+ 
Sbjct: 47  LDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQFTALPND 106

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L  N+L   P  + +L +L+ L+L  N++ T+  DI  L  L  LS+ +
Sbjct: 107 IGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGKLQKLERLSLIE 166

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+++ L  E+G LK L  LDL  N L  LPKEIG    L  L L  N+L  +P+ +G L 
Sbjct: 167 NQLKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELK 226

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L +  N+L+++P+ + +  +L E  +    L +LP      +  + N+T+      
Sbjct: 227 NLQVLHIGSNQLKTLPKEIGELQNLQELYLYTNQLKTLP----KEIGELQNLTV------ 276

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                                                  +++  N L +LP ++G    L
Sbjct: 277 ---------------------------------------LDLHINELKTLPKEIGELQNL 297

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           T L+L  N++  L ++I  L +L VL L NN LK LP+ IG L++L+ L L++
Sbjct: 298 TVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKLKELRKLHLDD 350



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 105/286 (36%), Positives = 153/286 (53%), Gaps = 27/286 (9%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           N+ + L N  ++  L LS  RL ++P+ + +  +L   N+    L++LP+ +   L ++ 
Sbjct: 33  NLTEALQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEI-GKLQNLQ 91

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + L +N+FTA P                 N I K+        KNL ++++  N LT+ 
Sbjct: 92  LLNLDKNQFTALP-----------------NDIGKL--------KNLQELHLSFNQLTTF 126

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P D+G    L EL+L  NQ++ L  DI  L  LE L L  N LK L   IG L++L+ LD
Sbjct: 127 PNDIGQLQNLRELHLSVNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLD 186

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L  N+L +LP EIG LK L+ L L  NQL +LP  IG L NL  L +G N L+++P+EIG
Sbjct: 187 LNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIG 246

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L+NL  LYL  N  L  +P E+    NL ++ L    L  +P EI
Sbjct: 247 ELQNLQELYLYTNQ-LKTLPKEIGELQNLTVLDLHINELKTLPKEI 291


>gi|301775170|ref|XP_002923003.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1-like [Ailuropoda melanoleuca]
          Length = 521

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 197/390 (50%), Gaps = 28/390 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + L  +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I
Sbjct: 9   RXLETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 68

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LPPE+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT
Sbjct: 69  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLT 128

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L ++   L+S+PE +    +L    +    L+ LPD L                     
Sbjct: 129 CLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL--------------------- 167

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
               TQ   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L
Sbjct: 168 ----TQLRRLEELDLGNNEIYNLPESIGALL-HLKDLWLDGNQLSELPQEIGNLKNLLCL 222

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L +++N+L  LP  +
Sbjct: 223 DVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAV 282

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + L  L+L  N+L++LP++IG L  L+ L+   N L S+P+EIG   +L    + DN
Sbjct: 283 GDCESLTELVLTENRLLTLPKSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFCVRDN 342

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ IP E++  + L ++ +    L  +P
Sbjct: 343 R-LSRIPAEVSQATELHVLDVAGNRLLHLP 371



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/314 (35%), Positives = 165/314 (52%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 81  LVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 140

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 141 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 200

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 201 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIG 260

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE +  C  L E  +    L +LP   +  L  +NN+   RN
Sbjct: 261 KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKS-IGKLKKLNNLNADRN 319

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 320 KLVSLPKEIGGCCSLT-VFCV--RDNRLSRIPAEV-SQATELHVLDVAGNRLLHLPLSL- 374

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 375 TALKLKALWLSDNQ 388



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 167/349 (47%), Gaps = 56/349 (16%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L ELP++      L  L L  NE+  +P  + N + L  L +S N + 
Sbjct: 33  RSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIP 92

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQ 354
            +PE++S C  L   +  G  L+ LP+    L +LT  S+N+I+L            P  
Sbjct: 93  EIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQ---------SLPEN 143

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
             ++Y                     NL+ + +++NLLT LP  L     L EL+LG N+
Sbjct: 144 IGNLY---------------------NLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 182

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           I  L E I  L++L+ L L  N L +LP  IGNL+ L CLD+ EN+LE LP EI  L  L
Sbjct: 183 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 242

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN-- 532
             L++  N L  +P  IG L  LS L V +N L  +PE +G  E+L  L L +N  L   
Sbjct: 243 TDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLP 302

Query: 533 --------------------NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                               ++P E+  C +L +  + +  LS+IP+E+
Sbjct: 303 KSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLSRIPAEV 351



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 186/383 (48%), Gaps = 28/383 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LGL++N +  LP 
Sbjct: 14  IDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPP 73

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFN---RIKTVHPDIQYLS----- 216
            +AN  QL  LD+  N + E+P  +    +L+I     N   R+    P++Q L+     
Sbjct: 74  EIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVN 133

Query: 217 ---------------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
                          NL+ L +R+N +  LP  L +L+ L  LDL +N +  LP+ IG  
Sbjct: 134 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 193

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L  L L  N+L  +P  +GNL NL  L +S NRLE +PE +S    L +  +    L 
Sbjct: 194 LHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLE 253

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
            +PDG +  L  ++ + + +N+ T  P        S+  +    N++  +P  I  + K 
Sbjct: 254 MIPDG-IGKLKKLSILKVDQNRLTQLPEAV-GDCESLTELVLTENRLLTLPKSI-GKLKK 310

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           L+ +N   N L SLP ++G    LT   +  N++S++  ++     L VL ++ N L  L
Sbjct: 311 LNNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLSRIPAEVSQATELHVLDVAGNRLLHL 370

Query: 442 PSSIGNLRKLKCLDLEENKLESL 464
           P S+  L KLK L L +N+ + L
Sbjct: 371 PLSLTAL-KLKALWLSDNQSQPL 392



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 124/223 (55%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +L+L ++ +T+LP S+ +L  LEEL L  N++ +LP  IG + +L  L L  N L+ 
Sbjct: 149 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 208

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + NL+ L  LD+  N+L  LP  +  LTSL  L +  N ++ +   I  L  LS+L
Sbjct: 209 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSIL 268

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++ +LP  +G+ ++L  L L  N L  LPK IG    L  L+   N+LV++P  +
Sbjct: 269 KVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLNNLNADRNKLVSLPKEI 328

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
           G   +LT   +  NRL  +P  +S+   L+  +V G  L  LP
Sbjct: 329 GGCCSLTVFCVRDNRLSRIPAEVSQATELHVLDVAGNRLLHLP 371



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 1/104 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E++  L L+++ +  LP S+ KL  L  L    NKL SLP +IG   +LT   + +N L+
Sbjct: 286 ESLTELVLTENRLLTLPKSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLS 345

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR 204
            +P  ++   +L VLD+  N+L  LP+ +  L  LK L+L  N+
Sbjct: 346 RIPAEVSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDNQ 388


>gi|281362657|ref|NP_001163747.1| scribbled, isoform M [Drosophila melanogaster]
 gi|272477197|gb|ACZ95041.1| scribbled, isoform M [Drosophila melanogaster]
          Length = 2490

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 207/424 (48%), Gaps = 51/424 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LGL++N +  LP 
Sbjct: 18  VDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPP 77

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            + N + L  LD+  N + ++P  +  L SL++     N I  +      L NL++L + 
Sbjct: 78  DIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLN 137

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE+ ++P  LG L
Sbjct: 138 DMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYL 197

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             L  L L +N+L+ +P  L                     GLL+ LT ++   +S N+ 
Sbjct: 198 PGLHELWLDHNQLQRLPPEL---------------------GLLTKLTYLD---VSENRL 233

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
              P                 N+I     G+ S    L+ +++  NLL +LP  +     
Sbjct: 234 EELP-----------------NEIS----GLVS----LTDLDLAQNLLEALPDGIAKLSR 268

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  L+++ N LE L
Sbjct: 269 LTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYL 328

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  +  L+ L  ++
Sbjct: 329 PLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQ-LKAVW 387

Query: 525 LNDN 528
           L++N
Sbjct: 388 LSEN 391



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|386766577|ref|NP_001247321.1| scribbled, isoform Q [Drosophila melanogaster]
 gi|383292970|gb|AFH06638.1| scribbled, isoform Q [Drosophila melanogaster]
          Length = 2577

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RN------------------------------------------------ALEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 207/424 (48%), Gaps = 51/424 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LGL++N +  LP 
Sbjct: 18  VDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPP 77

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            + N + L  LD+  N + ++P  +  L SL++     N I  +      L NL++L + 
Sbjct: 78  DIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLN 137

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE+ ++P  LG L
Sbjct: 138 DMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYL 197

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             L  L L +N+L+ +P  L                     GLL+ LT ++   +S N+ 
Sbjct: 198 PGLHELWLDHNQLQRLPPEL---------------------GLLTKLTYLD---VSENRL 233

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
              P                 N+I     G+ S    L+ +++  NLL +LP  +     
Sbjct: 234 EELP-----------------NEIS----GLVS----LTDLDLAQNLLEALPDGIAKLSR 268

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  L+++ N LE L
Sbjct: 269 LTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYL 328

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  +  L+ L  ++
Sbjct: 329 PLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQ-LKAVW 387

Query: 525 LNDN 528
           L++N
Sbjct: 388 LSEN 391



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T L+ L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
            + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL
Sbjct: 27  QVPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENL 85

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
             L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+ 
Sbjct: 86  VELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLP 145

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
            D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L
Sbjct: 146 ADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWL 205

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
            HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG   
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG--- 262

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
            +  ++ +T+                     +  + N++ ++        +N+ ++ + +
Sbjct: 263 -IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTE 299

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
           N L+ LP  +G    L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN  
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
            L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 360 VLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|456985860|gb|EMG21570.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Copenhageni str. LT2050]
          Length = 368

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 126/367 (34%), Positives = 186/367 (50%), Gaps = 49/367 (13%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N  ++RVLDL   +L  LP+ + KL +L+ LYL +N++                
Sbjct: 38  LTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTV-------------- 83

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
                    LP E+ +LKNL  L L  N L  LPKEI     L  LDL  N+L  +P  +
Sbjct: 84  ---------LPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEI 134

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L L  NRL ++ + + +  +L   ++    L++LP+ +   L ++ ++ LS 
Sbjct: 135 EQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEI-EQLKNLKSLYLSE 193

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P                             + +NL  + + +N +T LP ++  
Sbjct: 194 NQFATFPKE-------------------------IGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L L  NQ+  L ++I+ L NL+ L LS N L  LP  +G L  L+ LDL  N+L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
           ++LP EI  LK LQ L L +NQL  LP+ IG L NL +LS+  N L ++P EI  L+NL 
Sbjct: 289 KTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQ 348

Query: 522 TLYLNDN 528
           TLYLN+N
Sbjct: 349 TLYLNNN 355



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 113/331 (34%), Positives = 180/331 (54%), Gaps = 26/331 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + KL +L+ LYL+ N+L  LP +I  + NL  L L  N LT+LP  
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VLDL  N+L  LP  + +L +L++LYL  NR+ T+  DI+ L NL  L + +
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+ +LKNL +L L+ N     PKEIG    L  L L +N++  +P+ +  L 
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLK 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LS N+L ++P+ + +                        L ++  + LS N+ T
Sbjct: 231 KLQYLYLSDNQLITLPKEIEQ------------------------LKNLQTLDLSYNQLT 266

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++ +++  +NQ+  +P  I  + KNL  + + +N LT LP ++G    L
Sbjct: 267 ILPKEV-GQLENLQTLDLRNNQLKTLPKEI-EQLKNLQTLFLSNNQLTILPQEIGKLKNL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
             L+L  NQ++ L  +I+ L NL+ L L+NN
Sbjct: 325 LWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 153/309 (49%), Gaps = 27/309 (8%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  LDL   EL  +P  +G L NL RL L YN+L  +P+ + +  +L  
Sbjct: 37  DLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQL 96

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
             +    L++LP  +   L ++  + L  N+ T  P                        
Sbjct: 97  LYLRSNRLTTLPKEI-EQLKNLQVLDLGSNQLTVLPQE---------------------- 133

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
                + KNL  + +  N LT+L  D+     L  L+L  NQ++ L  +I+ L NL+ L 
Sbjct: 134 ---IEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 190

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           LS N     P  IG L+ LK L L  N++  LPNEI  LK+LQ L L  NQL++LP+ I 
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIE 250

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L +  N L  +P+E+G LENL TL L +N  L  +P E+    NLQ + L N 
Sbjct: 251 QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLSNN 309

Query: 553 PLSQIPSEI 561
            L+ +P EI
Sbjct: 310 QLTILPQEI 318



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 147/246 (59%), Gaps = 1/246 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  +E+L +L+ LYL+ N+L +L   I  + NL  L L+ N LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  L+ L+ L L  N+    P  + +L +LK+L+L  N+I  +  +I  L  L  
Sbjct: 175 TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQY 234

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN++  LP E+ +LKNL TLDL++N L  LPKE+G    L TLDL++N+L  +P  
Sbjct: 235 LYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L LS N+L  +P+ + K  +L   ++    L++LP+  +  L ++  + L+
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNE-IEQLKNLQTLYLN 353

Query: 341 RNKFTA 346
            N+F++
Sbjct: 354 NNQFSS 359



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N  +++ LDL   +L++LP EIG LK LQRL L  NQL  LP+ I  L NL 
Sbjct: 36  RDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 95

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N L ++P+EI  L+NL  L L  N  L  +P E+    NLQ++ L +  L+ + 
Sbjct: 96  LLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQ-LTVLPQEIEQLKNLQLLYLHSNRLTTLS 154

Query: 559 SEI 561
            +I
Sbjct: 155 KDI 157


>gi|326921749|ref|XP_003207118.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387 homolog [Meleagris gallopavo]
          Length = 1287

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 247/489 (50%), Gaps = 24/489 (4%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           FL   EE    L LS   +  +P S  +  +++ L L  N++ +L      ++NL  L L
Sbjct: 146 FLLPAEERNFTLRLSDKGLQDVPQSASESQNVKTLLLQNNEIKTLRLNTVNLSNLEILIL 205

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF------------ 202
             N LT LP  ++ L +L+VL++ HN+L+ LP  + KL ++K L+L              
Sbjct: 206 ERNRLTLLPPEISLLHKLKVLNVSHNQLSCLPEELSKLVNIKELFLNHNSIDEFPFALKS 265

Query: 203 --------NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
                   N++KT+   +  + NL +L++  N+I   P  L  L NLV L L  N ++ L
Sbjct: 266 LETLELAGNKLKTLPDAMIDMKNLKVLNIDSNQISIFPRVLCYLPNLVNLSLCENFIQSL 325

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           PK+I     L    + HN+L+ +   L  L  L  LR   N+LE + + +     L   N
Sbjct: 326 PKDIKELKKLQEFSISHNKLIFLAVQLFQLTKLKGLRADDNKLEFLSDKVENLRELTFLN 385

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +      S+ D  L + T + ++ L  N+ T  P+    +   +  ++   NQ+  +   
Sbjct: 386 LSKNLFKSITDN-LCNCTMLKHLVLCDNQLTQLPA-NIHRLKHLKELSLNRNQLHSLVEQ 443

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           I S  K+LSK+ +  N+LT +P++L T + +T+ +L  N++S+    +  L +L+ L LS
Sbjct: 444 I-SHLKDLSKIELSGNVLTYIPVELKTCIRITKADLSNNKLSQFPNVVCALSDLKYLNLS 502

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
            N + +L   I +++ L+ L+L++NKL S    +  L +L  L +  N++ S+P  +  +
Sbjct: 503 GNSISELIPGISDIKDLEHLELKKNKLSSFSACLCSLTKLVYLDVSENEINSMPAVVSEM 562

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
             L  L +  N   S PEE+ +L+ L TL +++N  + +IP +++    ++ +++ N   
Sbjct: 563 KALQVLLLHHNKFDSFPEELCSLKGLKTLDISNNQ-IKDIPLKISNLEMIKDLNVSNNQF 621

Query: 555 SQIPSEIVV 563
           +  PSEI +
Sbjct: 622 ASFPSEICL 630



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 220/435 (50%), Gaps = 6/435 (1%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N++NL L ++ I  LP  +++L  L+E  +  NKL  L  Q+  +T L  L   +N
Sbjct: 307 CYLPNLVNLSLCENFIQSLPKDIKELKKLQEFSISHNKLIFLAVQLFQLTKLKGLRADDN 366

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L  L D + NL++L  L+L  N    +   +   T LK L L  N++  +  +I  L +
Sbjct: 367 KLEFLSDKVENLRELTFLNLSKNLFKSITDNLCNCTMLKHLVLCDNQLTQLPANIHRLKH 426

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  LS+  N++  L  ++  LK+L  ++L+ N L  +P E+  C  +   DL +N+L   
Sbjct: 427 LKELSLNRNQLHSLVEQISHLKDLSKIELSGNVLTYIPVELKTCIRITKADLSNNKLSQF 486

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P+++  L +L  L LS N +  +   +S    L    ++   LSS     L SLT +  +
Sbjct: 487 PNVVCALSDLKYLNLSGNSISELIPGISDIKDLEHLELKKNKLSSF-SACLCSLTKLVYL 545

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            +S N+  + P+   ++  ++  +   HN+ D  P  + S  K L  +++ +N +  +PL
Sbjct: 546 DVSENEINSMPA-VVSEMKALQVLLLHHNKFDSFPEELCS-LKGLKTLDISNNQIKDIPL 603

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS--NNL-LKKLPSSIGNLRKLKCL 454
            +     + +LN+  NQ +    +I  L +LE L +   N L L K+P  +  L  L+ L
Sbjct: 604 KISNLEMIKDLNVSNNQFASFPSEICLLSSLEKLTVCQVNGLKLTKIPEELSKLVSLREL 663

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           D+  N L+ +P+ IG LK L  LI  +N++  LP++I  L +L +L + EN L+ +P  +
Sbjct: 664 DISHNALKEMPDSIGELKFLVHLIANNNEISQLPKSITSLRSLQHLDLSENRLRYLPAGL 723

Query: 515 GTLENLHTLYLNDNT 529
             L  L  +  + N+
Sbjct: 724 RHLYLLKDINFDGNS 738



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 218/449 (48%), Gaps = 29/449 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+L+ + +  LP ++  + +L+ L +  N+++  P  + Y+ NL  L L EN + SLP  
Sbjct: 269 LELAGNKLKTLPDAMIDMKNLKVLNIDSNQISIFPRVLCYLPNLVNLSLCENFIQSLPKD 328

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR- 224
           +  L++L+   + HNKL  L + +++LT LK L    N+++ +   ++ L  L+ L++  
Sbjct: 329 IKELKKLQEFSISHNKLIFLAVQLFQLTKLKGLRADDNKLEFLSDKVENLRELTFLNLSK 388

Query: 225 ----------------------DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
                                 DN++ +LP  +  LK+L  L L  N L  L ++I +  
Sbjct: 389 NLFKSITDNLCNCTMLKHLVLCDNQLTQLPANIHRLKHLKELSLNRNQLHSLVEQISHLK 448

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  ++L  N L  IP  L   I +T+  LS N+L   P  +     L   N+ G ++S 
Sbjct: 449 DLSKIELSGNVLTYIPVELKTCIRITKADLSNNKLSQFPNVVCALSDLKYLNLSGNSISE 508

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           L  G +S +  + ++ L +NK +++ S      T +  ++   N+I+ +P  + S  K L
Sbjct: 509 LIPG-ISDIKDLEHLELKKNKLSSF-SACLCSLTKLVYLDVSENEINSMP-AVVSEMKAL 565

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + +  N   S P +L +  GL  L++  NQI  +   I NL  ++ L +SNN     P
Sbjct: 566 QVLLLHHNKFDSFPEELCSLKGLKTLDISNNQIKDIPLKISNLEMIKDLNVSNNQFASFP 625

Query: 443 SSI---GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
           S I    +L KL    +   KL  +P E+  L  L+ L +  N L  +P +IG L  L +
Sbjct: 626 SEICLLSSLEKLTVCQVNGLKLTKIPEELSKLVSLRELDISHNALKEMPDSIGELKFLVH 685

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L    N +  +P+ I +L +L  L L++N
Sbjct: 686 LIANNNEISQLPKSITSLRSLQHLDLSEN 714



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 236/483 (48%), Gaps = 16/483 (3%)

Query: 89  LNIEKEFLRCKEE------NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQ 142
           LN+    L C  E      NI  L L+ +SI   P +   L  LE L L GNKL +LP  
Sbjct: 226 LNVSHNQLSCLPEELSKLVNIKELFLNHNSIDEFPFA---LKSLETLELAGNKLKTLPDA 282

Query: 143 IGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           +  + NL  L +  N ++  P  L  L  L  L L  N +  LP  + +L  L+   +  
Sbjct: 283 MIDMKNLKVLNIDSNQISIFPRVLCYLPNLVNLSLCENFIQSLPKDIKELKKLQEFSISH 342

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N++  +   +  L+ L  L   DNK+  L  ++  L+ L  L+L+ N  + +   + NCT
Sbjct: 343 NKLIFLAVQLFQLTKLKGLRADDNKLEFLSDKVENLRELTFLNLSKNLFKSITDNLCNCT 402

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           ML  L L  N+L  +P  +  L +L  L L+ N+L S+ E +S    L++  + G  L+ 
Sbjct: 403 MLKHLVLCDNQLTQLPANIHRLKHLKELSLNRNQLHSLVEQISHLKDLSKIELSGNVLTY 462

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P  L + +  I    LS NK + +P+      + +  +N   N I ++  GI S  K+L
Sbjct: 463 IPVELKTCI-RITKADLSNNKLSQFPN-VVCALSDLKYLNLSGNSISELIPGI-SDIKDL 519

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + +K N L+S    L +   L  L++  N+I+ +   +  +  L+VL+L +N     P
Sbjct: 520 EHLELKKNKLSSFSACLCSLTKLVYLDVSENEINSMPAVVSEMKALQVLLLHHNKFDSFP 579

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
             + +L+ LK LD+  N+++ +P +I  L+ ++ L + +NQ  S P  I  L++L  L+V
Sbjct: 580 EELCSLKGLKTLDISNNQIKDIPLKISNLEMIKDLNVSNNQFASFPSEICLLSSLEKLTV 639

Query: 503 GENN---LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPS 559
            + N   L  IPEE+  L +L  L ++ N  L  +P  +     L  +  +N  +SQ+P 
Sbjct: 640 CQVNGLKLTKIPEELSKLVSLRELDISHNA-LKEMPDSIGELKFLVHLIANNNEISQLPK 698

Query: 560 EIV 562
            I 
Sbjct: 699 SIT 701



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 183/381 (48%), Gaps = 33/381 (8%)

Query: 89  LNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQ 142
           LN+ K   +   +N+ N      L L  + +T LP ++ +L HL+EL L  N+L SL  Q
Sbjct: 384 LNLSKNLFKSITDNLCNCTMLKHLVLCDNQLTQLPANIHRLKHLKELSLNRNQLHSLVEQ 443

Query: 143 IGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           I ++ +L+ + L+ N LT +P  L    ++   DL +NKL++ P VV  L+ LK L L  
Sbjct: 444 ISHLKDLSKIELSGNVLTYIPVELKTCIRITKADLSNNKLSQFPNVVCALSDLKYLNLSG 503

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N I  + P I  + +L  L ++ NK+      L  L  LV LD++ N +  +P  +    
Sbjct: 504 NSISELIPGISDIKDLEHLELKKNKLSSFSACLCSLTKLVYLDVSENEINSMPAVVSEMK 563

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  L L HN+  + P+ L +L  L  L +S N+++ +P  +S    + + NV     +S
Sbjct: 564 ALQVLLLHHNKFDSFPEELCSLKGLKTLDISNNQIKDIPLKISNLEMIKDLNVSNNQFAS 623

Query: 323 LPD--GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            P    LLSSL  +    ++  K T  P                            S+  
Sbjct: 624 FPSEICLLSSLEKLTVCQVNGLKLTKIPEE-------------------------LSKLV 658

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           +L ++++  N L  +P  +G    L  L    N+IS+L + I +L +L+ L LS N L+ 
Sbjct: 659 SLRELDISHNALKEMPDSIGELKFLVHLIANNNEISQLPKSITSLRSLQHLDLSENRLRY 718

Query: 441 LPSSIGNLRKLKCLDLEENKL 461
           LP+ + +L  LK ++ + N L
Sbjct: 719 LPAGLRHLYLLKDINFDGNSL 739


>gi|421132053|ref|ZP_15592227.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410356605|gb|EKP03922.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 403

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 198/365 (54%), Gaps = 49/365 (13%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L  N+L +LP +IG + NL  L L  N LT+LP+ +  L+ L+ LD+  N+++  P  
Sbjct: 51  LDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKTLDITRNRISTFPKE 110

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
            +KL +L++L+L  NR+  +  +I+ L+ L++L++ DN++  LP E+G+L+NL+TL L+ 
Sbjct: 111 FWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKEIGQLENLLTLYLSG 170

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N+L  LP E+G    L++L L  N+L+++P  +  L NL  L L  N   ++PE + K  
Sbjct: 171 NNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNLGILHLFDNEFNTLPEEIGKLE 230

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L   ++                        SRN+F+ +P                    
Sbjct: 231 NLKILDI------------------------SRNRFSTFPKE------------------ 248

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
                  F + K L+ +N+ +N LT+LP ++G    L  L+L  N+++ L  ++  L NL
Sbjct: 249 -------FWKLKKLNVLNLSNNQLTTLPKEIGQLENLFILHLSVNKLNSLPNEMGQLKNL 301

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           +VL L+ N L  LP  IG L+KL  L L+ N+L  LP EIG L+ L  L L +N+L+S+P
Sbjct: 302 DVLYLNGNNLSNLPEEIGELKKLSILKLDSNQLTILPKEIGQLENLVTLSLSNNKLISIP 361

Query: 489 RAIGH 493
             +G 
Sbjct: 362 NELGQ 366



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 127/355 (35%), Positives = 181/355 (50%), Gaps = 26/355 (7%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +L ++L    ++R+LDL  N+L  LP  + +L +L+ LYL  N + T+  +I  L NL  
Sbjct: 37  NLIEALKTPNEVRILDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKT 96

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+I   P E  +LKNL  L L  N L  LP+EI     L  L+L  N+L  +P  
Sbjct: 97  LDITRNRISTFPKEFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKE 156

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LS N L S+P  + +  +L    + G  L SLP  +   L ++  + L 
Sbjct: 157 IGQLENLLTLYLSGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEI-RQLGNLGILHLF 215

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+F   P                  +I K+        +NL  +++  N  ++ P +  
Sbjct: 216 DNEFNTLPE-----------------EIGKL--------ENLKILDISRNRFSTFPKEFW 250

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  LNL  NQ++ L ++I  L NL +L LS N L  LP+ +G L+ L  L L  N 
Sbjct: 251 KLKKLNVLNLSNNQLTTLPKEIGQLENLFILHLSVNKLNSLPNEMGQLKNLDVLYLNGNN 310

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L +LP EIG LK+L  L L SNQL  LP+ IG L NL  LS+  N L SIP E+G
Sbjct: 311 LSNLPEEIGELKKLSILKLDSNQLTILPKEIGQLENLVTLSLSNNKLISIPNELG 365



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 120/320 (37%), Positives = 170/320 (53%), Gaps = 4/320 (1%)

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
           +L +  N++  LP E+G+L NL  L L +N L  LP+EIG    L TLD+  N +   P 
Sbjct: 50  ILDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKTLDITRNRISTFPK 109

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
               L NL  L L+ NRL  +PE + +   LN  N+    L++LP  +   L ++  + L
Sbjct: 110 EFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKEI-GQLENLLTLYL 168

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           S N   + P+    Q  ++ S+    N++  +P  I  +  NL  +++ DN   +LP ++
Sbjct: 169 SGNNLNSLPNEM-GQLKNLISLYLSGNKLISLPKEI-RQLGNLGILHLFDNEFNTLPEEI 226

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G    L  L++  N+ S   ++   L  L VL LSNN L  LP  IG L  L  L L  N
Sbjct: 227 GKLENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLTTLPKEIGQLENLFILHLSVN 286

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           KL SLPNE+G LK L  L L  N L +LP  IG L  LS L +  N L  +P+EIG LEN
Sbjct: 287 KLNSLPNEMGQLKNLDVLYLNGNNLSNLPEEIGELKKLSILKLDSNQLTILPKEIGQLEN 346

Query: 520 LHTLYLNDNTCLNNIPFELA 539
           L TL L++N  + +IP EL 
Sbjct: 347 LVTLSLSNNKLI-SIPNELG 365



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 113/341 (33%), Positives = 179/341 (52%), Gaps = 26/341 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS + +T LP  + +L +LE LYL  N+L +LP +IG + NL  L +  N +++ P  
Sbjct: 51  LDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKTLDITRNRISTFPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
              L+ L VL L  N+L+ LP  + +L  L +L L  N++ T+  +I  L NL  L +  
Sbjct: 111 FWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKEIGQLENLLTLYLSG 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N +  LP E+G+LKNL++L L+ N L  LPKEI     L  L L  NE   +P+ +G L 
Sbjct: 171 NNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNLGILHLFDNEFNTLPEEIGKLE 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L +S NR  + P+   K   LN  N+    L++LP  +                  
Sbjct: 231 NLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLTTLPKEI------------------ 272

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                   Q  +++ ++   N+++ +P  +  + KNL  + +  N L++LP ++G    L
Sbjct: 273 -------GQLENLFILHLSVNKLNSLPNEM-GQLKNLDVLYLNGNNLSNLPEEIGELKKL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           + L L +NQ++ L ++I  L NL  L LSNN L  +P+ +G
Sbjct: 325 SILKLDSNQLTILPKEIGQLENLVTLSLSNNKLISIPNELG 365



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 110/318 (34%), Positives = 156/318 (49%), Gaps = 27/318 (8%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           LDL+ N L  LPKEIG    L  L L +NEL  +P+ +G L NL  L ++ NR+ + P+ 
Sbjct: 51  LDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKTLDITRNRISTFPKE 110

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
             K  +L    + G  LS LP+ +                 T                  
Sbjct: 111 FWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTT------------------ 152

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
                  +P  I  + +NL  + +  N L SLP ++G    L  L L  N++  L ++I+
Sbjct: 153 -------LPKEI-GQLENLLTLYLSGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIR 204

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
            L NL +L L +N    LP  IG L  LK LD+  N+  + P E   LK+L  L L +NQ
Sbjct: 205 QLGNLGILHLFDNEFNTLPEEIGKLENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQ 264

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
           L +LP+ IG L NL  L +  N L S+P E+G L+NL  LYLN N  L+N+P E+     
Sbjct: 265 LTTLPKEIGQLENLFILHLSVNKLNSLPNEMGQLKNLDVLYLNGNN-LSNLPEEIGELKK 323

Query: 544 LQIMSLDNCPLSQIPSEI 561
           L I+ LD+  L+ +P EI
Sbjct: 324 LSILKLDSNQLTILPKEI 341



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 154/274 (56%), Gaps = 2/274 (0%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  LD++++ I+  P    KL +LE L+L GN+L+ LP +I  +  L  L L +N 
Sbjct: 90  KLENLKTLDITRNRISTFPKEFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQ 149

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP  +  L+ L  L L  N LN LP  + +L +L  LYL  N++ ++  +I+ L NL
Sbjct: 150 LTTLPKEIGQLENLLTLYLSGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNL 209

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            +L + DN+   LP E+G+L+NL  LD++ N     PKE      L  L+L +N+L  +P
Sbjct: 210 GILHLFDNEFNTLPEEIGKLENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLTTLP 269

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L NL  L LS N+L S+P  + +  +L+   + G  LS+LP+  +  L  ++ + 
Sbjct: 270 KEIGQLENLFILHLSVNKLNSLPNEMGQLKNLDVLYLNGNNLSNLPEE-IGELKKLSILK 328

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
           L  N+ T  P     Q  ++ +++  +N++  IP
Sbjct: 329 LDSNQLTILPK-EIGQLENLVTLSLSNNKLISIP 361



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 77/157 (49%), Gaps = 24/157 (15%)

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           + +L LS+N L  LP  IG L  L+ L L  N+L +LP EIG L+ L+ L +  N++ + 
Sbjct: 48  VRILDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKTLDITRNRISTF 107

Query: 488 PRAIGHLTNLSYLSVGENNLQSIPE-----------------------EIGTLENLHTLY 524
           P+    L NL  L +  N L  +PE                       EIG LENL TLY
Sbjct: 108 PKEFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKEIGQLENLLTLY 167

Query: 525 LNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+ N  LN++P E+    NL  + L    L  +P EI
Sbjct: 168 LSGNN-LNSLPNEMGQLKNLISLYLSGNKLISLPKEI 203


>gi|255089435|ref|XP_002506639.1| predicted protein [Micromonas sp. RCC299]
 gi|226521912|gb|ACO67897.1| predicted protein [Micromonas sp. RCC299]
          Length = 392

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/307 (34%), Positives = 161/307 (52%), Gaps = 26/307 (8%)

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P ++G    L  L+L++NEL  +P+ +  L +LT L LS N+L SVP  + +   L +  
Sbjct: 61  PADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAEIGQLASLKDLR 120

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +    L  LP  ++  LTS+  + LS N+ T+ P+                         
Sbjct: 121 ITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVPA------------------------- 155

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
              R  +L+ + +  N LTS+P ++G    LT L L  N+++ +  +I  L +L  L LS
Sbjct: 156 EIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLS 215

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
            N L  +P+ IG L  L  L L+ NKL S+P EIG L  L  L L  N+L S+P  IG L
Sbjct: 216 GNKLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGQL 275

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
           T L  L +  N L S+P EIG L +LH L+L+DN  L ++P E+   ++L+  +L N  L
Sbjct: 276 TALEGLFLDGNKLTSVPAEIGRLTSLHALFLSDNK-LTSVPAEIGRLTSLREFTLHNNKL 334

Query: 555 SQIPSEI 561
           + +P+EI
Sbjct: 335 TSVPAEI 341



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 171/325 (52%), Gaps = 7/325 (2%)

Query: 216 SNLSMLSMRDNKIREL---PPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             +++L   + K+  L   P +LG L  L  L+L +N L ELP+ I   T L  L L  N
Sbjct: 42  GRVAVLEWNEKKLASLSPAPADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSDN 101

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVP-ETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           +L ++P  +G L +L  LR++ N LE +P + + +   L   N+    L+S+P   +  L
Sbjct: 102 KLTSVPAEIGQLASLKDLRITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVP-AEIGRL 160

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
           TS+  + L  NK T+ P+    + TS+  +  + N++  +P  I  R  +L+ + +  N 
Sbjct: 161 TSLTGLGLDGNKLTSVPAE-IGRLTSLTVLRLDGNRLTSVPAEI-GRLTSLTYLRLSGNK 218

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           LTS+P ++G    LT L L  N+++ +  +I  L +L VL L  N L  +P+ IG L  L
Sbjct: 219 LTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGQLTAL 278

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           + L L+ NKL S+P EIG L  L  L L  N+L S+P  IG LT+L   ++  N L S+P
Sbjct: 279 EGLFLDGNKLTSVPAEIGRLTSLHALFLSDNKLTSVPAEIGRLTSLREFTLHNNKLTSVP 338

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPF 536
            EI  L      YL++   +    F
Sbjct: 339 AEIWRLRERGYAYLDEGVTIEGENF 363



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/317 (34%), Positives = 169/317 (53%), Gaps = 27/317 (8%)

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           SL+  P  L  L  L  L+LR+N+L ELP  +  LTSL  L+L  N++ +V  +I  L++
Sbjct: 56  SLSPAPADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAEIGQLAS 115

Query: 218 LSMLSMRDNKIRELPPE-LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           L  L + +N++ +LP + +G L +L  L+L+ N L  +P EIG  T L  L L  N+L +
Sbjct: 116 LKDLRITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTS 175

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L +LT LRL  NRL SVP  + +                        LTS+  
Sbjct: 176 VPAEIGRLTSLTVLRLDGNRLTSVPAEIGR------------------------LTSLTY 211

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + LS NK T+ P+    + TS+  +  + N++  +P  I  R  +L+ + +  N LTS+P
Sbjct: 212 LRLSGNKLTSVPA-EIGRLTSLTGLGLDGNKLTSVPAEI-GRLTSLTVLRLDGNRLTSVP 269

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  L L  N+++ +  +I  L +L  L LS+N L  +P+ IG L  L+   L
Sbjct: 270 AEIGQLTALEGLFLDGNKLTSVPAEIGRLTSLHALFLSDNKLTSVPAEIGRLTSLREFTL 329

Query: 457 EENKLESLPNEIGFLKE 473
             NKL S+P EI  L+E
Sbjct: 330 HNNKLTSVPAEIWRLRE 346



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 177/337 (52%), Gaps = 15/337 (4%)

Query: 43  YGYFE--DMPEKDNKKCGVDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKE 100
           +G+F+     E+  ++ GV +     V   E N+ K  +    P  ADL         + 
Sbjct: 18  FGFFDVDSKTEEGRERLGVVLDDKGRVAVLEWNEKKLASLSPAP--ADLG--------RL 67

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
             +  L+L  + +T LP  +  LT L +L+L  NKL S+P++IG + +L  L +  N L 
Sbjct: 68  NALWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAEIGQLASLKDLRITNNELE 127

Query: 161 SLPDS-LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
            LP   +  L  L  L+L  N+L  +P  + +LTSL  L L  N++ +V  +I  L++L+
Sbjct: 128 DLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLT 187

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
           +L +  N++  +P E+G L +L  L L+ N L  +P EIG  T L  L L  N+L ++P 
Sbjct: 188 VLRLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLTSVPA 247

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +G L +LT LRL  NRL SVP  + +   L    ++G  L+S+P   +  LTS++ + L
Sbjct: 248 EIGRLTSLTVLRLDGNRLTSVPAEIGQLTALEGLFLDGNKLTSVP-AEIGRLTSLHALFL 306

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIF 376
           S NK T+ P+    + TS+      +N++  +P  I+
Sbjct: 307 SDNKLTSVPA-EIGRLTSLREFTLHNNKLTSVPAEIW 342



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/265 (36%), Positives = 148/265 (55%), Gaps = 3/265 (1%)

Query: 297 LESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFT 356
           L   P  L +   L   N+    L+ LP+G+ S LTS+ ++ LS NK T+ P+    Q  
Sbjct: 57  LSPAPADLGRLNALWGLNLRNNELTELPEGI-SGLTSLTDLFLSDNKLTSVPAE-IGQLA 114

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS 416
           S+  +   +N+++ +P  I  R  +L+ +N+ DN LTS+P ++G    LT L L  N+++
Sbjct: 115 SLKDLRITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLT 174

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
            +  +I  L +L VL L  N L  +P+ IG L  L  L L  NKL S+P EIG L  L  
Sbjct: 175 SVPAEIGRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTG 234

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
           L L  N+L S+P  IG LT+L+ L +  N L S+P EIG L  L  L+L+ N  L ++P 
Sbjct: 235 LGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGQLTALEGLFLDGNK-LTSVPA 293

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEI 561
           E+   ++L  + L +  L+ +P+EI
Sbjct: 294 EIGRLTSLHALFLSDNKLTSVPAEI 318



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 163/290 (56%), Gaps = 4/290 (1%)

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
           +S++  P  + +L  L  L L  N+L  LP  I  +T+LT L L++N LTS+P  +  L 
Sbjct: 55  ASLSPAPADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAEIGQLA 114

Query: 171 QLRVLDLRHNKLNELP-MVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR 229
            L+ L + +N+L +LP  ++ +LTSL  L L  NR+ +V  +I  L++L+ L +  NK+ 
Sbjct: 115 SLKDLRITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLT 174

Query: 230 ELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTR 289
            +P E+G L +L  L L  N L  +P EIG  T L  L L  N+L ++P  +G L +LT 
Sbjct: 175 SVPAEIGRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTG 234

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS 349
           L L  N+L SVP  + +   L    ++G  L+S+P   +  LT++  + L  NK T+ P+
Sbjct: 235 LGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVP-AEIGQLTALEGLFLDGNKLTSVPA 293

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
               + TS++++    N++  +P  I  R  +L +  + +N LTS+P ++
Sbjct: 294 -EIGRLTSLHALFLSDNKLTSVPAEI-GRLTSLREFTLHNNKLTSVPAEI 341



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 81/134 (60%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + +T +P  + +LT L  L L GNKL S+P++IG +T+LT L L  N LTS+P  
Sbjct: 212 LRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAE 271

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L  L L  NKL  +P  + +LTSL  L+L  N++ +V  +I  L++L   ++ +
Sbjct: 272 IGQLTALEGLFLDGNKLTSVPAEIGRLTSLHALFLSDNKLTSVPAEIGRLTSLREFTLHN 331

Query: 226 NKIRELPPELGELK 239
           NK+  +P E+  L+
Sbjct: 332 NKLTSVPAEIWRLR 345



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 65/111 (58%), Gaps = 2/111 (1%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           ++  E  R     +L LD ++  +T +P  + +LT LE L+L GNKL S+P++IG +T+L
Sbjct: 244 SVPAEIGRLTSLTVLRLDGNR--LTSVPAEIGQLTALEGLFLDGNKLTSVPAEIGRLTSL 301

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
             L L++N LTS+P  +  L  LR   L +NKL  +P  +++L      YL
Sbjct: 302 HALFLSDNKLTSVPAEIGRLTSLREFTLHNNKLTSVPAEIWRLRERGYAYL 352


>gi|359462332|ref|ZP_09250895.1| leucine-rich repeat-containing protein [Acaryochloris sp. CCMEE
           5410]
          Length = 407

 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 194/368 (52%), Gaps = 8/368 (2%)

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +A LQ+   LDL    L++LP  +  L+ LK LYL  N +  +   +  L+ L +L +  
Sbjct: 16  IARLQEAAELDLSDIGLSDLPDSIGSLSQLKSLYLSENELMRLPKALGQLTQLQVLDLAR 75

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  L   LG L  L +LDL  N L ELP+ IG  + L +L+L  N+LV++P  +G L 
Sbjct: 76  NRLPILTDVLGYLSQLQSLDLTGNALVELPEFIGAFSQLRSLNLASNQLVHLPSSIGKLK 135

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L+LSYN +   PE L     L    +    L+ +P     SL  + ++ LS N   
Sbjct: 136 NLQELQLSYNSMAQWPEELGLLTGLRSLEITSTGLNEIPPAW-RSLEGLESLNLSFNHLK 194

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P    T  T + S++   NQ+ ++P  + S    L+ ++++ N L SLP  +   V L
Sbjct: 195 TLPEWLGT-LTDLRSLDLSFNQLSELPAALGSLTP-LTSLDIQSNQLQSLPPQICNLVNL 252

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK--CLDLEENK--- 460
           T L    NQ++ L E    L  L  L ++ N +++LP SIG L+ LK    +L+ ++   
Sbjct: 253 TSLLAYNNQLTHLPEAWGRLAALTTLGIAGNRIRQLPESIGELQNLKQFIFNLDPDQPVP 312

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L+  P  +   + L++L   + +L SLP  IG LT L  L+V  NNL  +P  +GTL+NL
Sbjct: 313 LQVFPAALRGCRLLEQLTFVACELRSLPPWIGELTQLKSLNVSHNNLTDLPLSLGTLDNL 372

Query: 521 HTLYLNDN 528
            TL L++N
Sbjct: 373 KTLNLSNN 380



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 185/365 (50%), Gaps = 12/365 (3%)

Query: 152 LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD 211
           L L++  L+ LPDS+ +L QL+ L L  N+L  LP  + +LT L++L L  NR+  +   
Sbjct: 25  LDLSDIGLSDLPDSIGSLSQLKSLYLSENELMRLPKALGQLTQLQVLDLARNRLPILTDV 84

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
           + YLS L  L +  N + ELP  +G    L +L+LA N L  LP  IG    L  L L +
Sbjct: 85  LGYLSQLQSLDLTGNALVELPEFIGAFSQLRSLNLASNQLVHLPSSIGKLKNLQELQLSY 144

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           N +   P+ LG L  L  L ++   L  +P        L   N+    L +LP+  L +L
Sbjct: 145 NSMAQWPEELGLLTGLRSLEITSTGLNEIPPAWRSLEGLESLNLSFNHLKTLPE-WLGTL 203

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
           T + ++ LS N+ +  P+   +  T + S++ + NQ+  +P  I +   NL+ +   +N 
Sbjct: 204 TDLRSLDLSFNQLSELPAALGS-LTPLTSLDIQSNQLQSLPPQICNLV-NLTSLLAYNNQ 261

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL-------LKKLPSS 444
           LT LP   G    LT L +  N+I +L E I  L NL+  +   NL       L+  P++
Sbjct: 262 LTHLPEAWGRLAALTTLGIAGNRIRQLPESIGELQNLKQFIF--NLDPDQPVPLQVFPAA 319

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
           +   R L+ L     +L SLP  IG L +L+ L +  N L  LP ++G L NL  L++  
Sbjct: 320 LRGCRLLEQLTFVACELRSLPPWIGELTQLKSLNVSHNNLTDLPLSLGTLDNLKTLNLSN 379

Query: 505 NNLQS 509
           N L+S
Sbjct: 380 NPLRS 384



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 175/340 (51%), Gaps = 8/340 (2%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +L LS++ +  LP ++ +LT L+ L L  N+L  L   +GY++ L  L L  N+L  LP+
Sbjct: 47  SLYLSENELMRLPKALGQLTQLQVLDLARNRLPILTDVLGYLSQLQSLDLTGNALVELPE 106

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            +    QLR L+L  N+L  LP  + KL +L+ L L +N +     ++  L+ L  L + 
Sbjct: 107 FIGAFSQLRSLNLASNQLVHLPSSIGKLKNLQELQLSYNSMAQWPEELGLLTGLRSLEIT 166

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
              + E+PP    L+ L +L+L+ NHL+ LP+ +G  T L +LDL  N+L  +P  LG+L
Sbjct: 167 STGLNEIPPAWRSLEGLESLNLSFNHLKTLPEWLGTLTDLRSLDLSFNQLSELPAALGSL 226

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             LT L +  N+L+S+P  +   V+L         L+ LP+     L ++  + ++ N+ 
Sbjct: 227 TPLTSLDIQSNQLQSLPPQICNLVNLTSLLAYNNQLTHLPEA-WGRLAALTTLGIAGNRI 285

Query: 345 TAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRA----KNLSKVNMKDNLLTSLPLDL 399
              P S G  Q    +  N + +Q   +P  +F  A    + L ++      L SLP  +
Sbjct: 286 RQLPESIGELQNLKQFIFNLDPDQ--PVPLQVFPAALRGCRLLEQLTFVACELRSLPPWI 343

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           G    L  LN+  N ++ L   +  L NL+ L LSNN L+
Sbjct: 344 GELTQLKSLNVSHNNLTDLPLSLGTLDNLKTLNLSNNPLR 383



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 148/295 (50%), Gaps = 8/295 (2%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +LDL+ +++  LP  +   + L  L L  N+L  LPS IG + NL  L L+ NS+   P+
Sbjct: 93  SLDLTGNALVELPEFIGAFSQLRSLNLASNQLVHLPSSIGKLKNLQELQLSYNSMAQWPE 152

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            L  L  LR L++    LNE+P     L  L+ L L FN +KT+   +  L++L  L + 
Sbjct: 153 ELGLLTGLRSLEITSTGLNEIPPAWRSLEGLESLNLSFNHLKTLPEWLGTLTDLRSLDLS 212

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
            N++ ELP  LG L  L +LD+  N L+ LP +I N   L +L   +N+L ++P+  G L
Sbjct: 213 FNQLSELPAALGSLTPLTSLDIQSNQLQSLPPQICNLVNLTSLLAYNNQLTHLPEAWGRL 272

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNV-----EGCALSSLPDGLLSSLTSINNITL 339
             LT L ++ NR+  +PE++ +  +L +F       +   L   P   L     +  +T 
Sbjct: 273 AALTTLGIAGNRIRQLPESIGELQNLKQFIFNLDPDQPVPLQVFPAA-LRGCRLLEQLTF 331

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
              +  + P     + T + S+N  HN +  +P  +     NL  +N+ +N L S
Sbjct: 332 VACELRSLPP-WIGELTQLKSLNVSHNNLTDLPLSL-GTLDNLKTLNLSNNPLRS 384



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 157/332 (47%), Gaps = 32/332 (9%)

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
           +  L+    LDL+   L +LP  IG+ + L +L L  NEL+ +P  LG L  L  L L+ 
Sbjct: 16  IARLQEAAELDLSDIGLSDLPDSIGSLSQLKSLYLSENELMRLPKALGQLTQLQVLDLAR 75

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
           NRL  + + L     L   ++ G AL  LP+ +                           
Sbjct: 76  NRLPILTDVLGYLSQLQSLDLTGNALVELPEFI-------------------------GA 110

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
           F+ + S+N   NQ+  +P  I  + KNL ++ +  N +   P +LG   GL  L + +  
Sbjct: 111 FSQLRSLNLASNQLVHLPSSI-GKLKNLQELQLSYNSMAQWPEELGLLTGLRSLEITSTG 169

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           ++++    ++L  LE L LS N LK LP  +G L  L+ LDL  N+L  LP  +G L  L
Sbjct: 170 LNEIPPAWRSLEGLESLNLSFNHLKTLPEWLGTLTDLRSLDLSFNQLSELPAALGSLTPL 229

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
             L +QSNQL SLP  I +L NL+ L    N L  +PE  G L  L TL +  N  +  +
Sbjct: 230 TSLDIQSNQLQSLPPQICNLVNLTSLLAYNNQLTHLPEAWGRLAALTTLGIAGNR-IRQL 288

Query: 535 PFELALCSNLQ--IMSLD---NCPLSQIPSEI 561
           P  +    NL+  I +LD     PL   P+ +
Sbjct: 289 PESIGELQNLKQFIFNLDPDQPVPLQVFPAAL 320



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 101/209 (48%), Gaps = 5/209 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E + +L+LS + +  LP  +  LT L  L L  N+L+ LP+ +G +T LT L +  N L 
Sbjct: 181 EGLESLNLSFNHLKTLPEWLGTLTDLRSLDLSFNQLSELPAALGSLTPLTSLDIQSNQLQ 240

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP  + NL  L  L   +N+L  LP    +L +L  L +  NRI+ +   I  L NL  
Sbjct: 241 SLPPQICNLVNLTSLLAYNNQLTHLPEAWGRLAALTTLGIAGNRIRQLPESIGELQNLKQ 300

Query: 221 LSM-----RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
                   +   ++  P  L   + L  L      L  LP  IG  T L +L++ HN L 
Sbjct: 301 FIFNLDPDQPVPLQVFPAALRGCRLLEQLTFVACELRSLPPWIGELTQLKSLNVSHNNLT 360

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETL 304
           ++P  LG L NL  L LS N L S  E L
Sbjct: 361 DLPLSLGTLDNLKTLNLSNNPLRSELEVL 389



 Score = 46.2 bits (108), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 28/138 (20%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT------- 150
           C   N+ +L    + +THLP +  +L  L  L + GN++  LP  IG + NL        
Sbjct: 247 CNLVNLTSLLAYNNQLTHLPEAWGRLAALTTLGIAGNRIRQLPESIGELQNLKQFIFNLD 306

Query: 151 ----------------C-----LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVV 189
                           C     L      L SLP  +  L QL+ L++ HN L +LP+ +
Sbjct: 307 PDQPVPLQVFPAALRGCRLLEQLTFVACELRSLPPWIGELTQLKSLNVSHNNLTDLPLSL 366

Query: 190 YKLTSLKILYLRFNRIKT 207
             L +LK L L  N +++
Sbjct: 367 GTLDNLKTLNLSNNPLRS 384


>gi|418707313|ref|ZP_13268139.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772360|gb|EKR47548.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 378

 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 115/313 (36%), Positives = 178/313 (56%), Gaps = 5/313 (1%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L + + K++ LP ++G+LKNL  LDL+ N L  LPKEI     L  L L +N+L  
Sbjct: 48  DVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTT 107

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
            P  +  L +L +L LS N+L  +P  + +  +L E N+    L ++   +   L ++  
Sbjct: 108 FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLRELNLWNNQLKTISKEI-EQLKNLQK 166

Query: 337 ITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
           + L  N+ TA+P   G  Q  ++ S+   +NQ+   P  I  + +NL ++ + DN LT+ 
Sbjct: 167 LYLDNNQLTAFPKEIGKLQ--NLKSLFLSNNQLTTFPKEI-GKLQNLQELYLHDNQLTTF 223

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
             ++G    L  L L  NQ   L E+I +L NL+ L L +N  K LP  IG L+ L+ L 
Sbjct: 224 TKEIGQLKNLRILLLNNNQFKILPEEIGHLKNLQALYLHDNQFKILPKEIGQLQNLQVLF 283

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L  N+ +++P E G LK L+ L L +NQL +LP+ IG L NL  L++  N L +IP+EIG
Sbjct: 284 LSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIG 343

Query: 516 TLENLHTLYLNDN 528
            L+NL TLYL +N
Sbjct: 344 QLQNLQTLYLRNN 356



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 135/264 (51%), Gaps = 25/264 (9%)

Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           L +LP+ +   L ++  + LS N+    P     Q  ++  +   +NQ+   P  I  + 
Sbjct: 59  LKALPEKI-GQLKNLQMLDLSDNQLIILPKE-IRQLKNLQELFLNYNQLTTFPKEI-EQL 115

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           K+L K+ + +N LT LP+++G    L ELNL  NQ+  +S++I+ L NL+ L L NN L 
Sbjct: 116 KSLHKLYLSNNQLTILPVEIGQLQNLRELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLT 175

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
             P  IG L+ LK L L  N+L + P EIG L+ LQ L L  NQL +  + IG L NL  
Sbjct: 176 AFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLHDNQLTTFTKEIGQLKNLRI 235

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTC----------------------LNNIPFE 537
           L +  N  + +PEEIG L+NL  LYL+DN                           IP E
Sbjct: 236 LLLNNNQFKILPEEIGHLKNLQALYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTIPVE 295

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
                NL+++SLD   L+ +P EI
Sbjct: 296 FGQLKNLKMLSLDANQLTALPKEI 319



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 131/259 (50%), Gaps = 25/259 (9%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L+ + +T  P  +E+L  L +LYL  N+L  LP +IG + NL  L L  N L 
Sbjct: 93  KNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLRELNLWNNQLK 152

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++   +  L+ L+ L L +N+L   P  + KL +LK L+L  N++ T   +I  L NL  
Sbjct: 153 TISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQE 212

Query: 221 LSMRDNKI-----------------------RELPPELGELKNLVTLDLAHNHLEELPKE 257
           L + DN++                       + LP E+G LKNL  L L  N  + LPKE
Sbjct: 213 LYLHDNQLTTFTKEIGQLKNLRILLLNNNQFKILPEEIGHLKNLQALYLHDNQFKILPKE 272

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           IG    L  L L +N+   IP   G L NL  L L  N+L ++P+ + K  +L   N++ 
Sbjct: 273 IGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDA 332

Query: 318 CALSSLPD--GLLSSLTSI 334
             L+++P   G L +L ++
Sbjct: 333 NQLTTIPKEIGQLQNLQTL 351



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 83/144 (57%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L++  QN +++ VL+LS   LK LP  IG L+ L+ LDL +N+L  LP EI  LK LQ L
Sbjct: 39  LTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 98

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L  NQL + P+ I  L +L  L +  N L  +P EIG L+NL  L L +N  L  I  E
Sbjct: 99  FLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLRELNLWNNQ-LKTISKE 157

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    NLQ + LDN  L+  P EI
Sbjct: 158 IEQLKNLQKLYLDNNQLTAFPKEI 181



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 96/176 (54%), Gaps = 23/176 (13%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLAS-------------------- 138
           K +N+ +L LS + +T  P  + KL +L+ELYL+ N+L +                    
Sbjct: 183 KLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLHDNQLTTFTKEIGQLKNLRILLLNNNQ 242

Query: 139 ---LPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
              LP +IG++ NL  L L +N    LP  +  LQ L+VL L +N+   +P+   +L +L
Sbjct: 243 FKILPEEIGHLKNLQALYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNL 302

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHL 251
           K+L L  N++  +  +I  L NL ML++  N++  +P E+G+L+NL TL L +N L
Sbjct: 303 KMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQL 358



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 71/123 (57%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  +  N   ++ L L E KL++LP +IG LK LQ L L  NQL+ LP+ I  L NL 
Sbjct: 37  RDLTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQ 96

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N L + P+EI  L++LH LYL++N  L  +P E+    NL+ ++L N  L  I 
Sbjct: 97  ELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQ-LTILPVEIGQLQNLRELNLWNNQLKTIS 155

Query: 559 SEI 561
            EI
Sbjct: 156 KEI 158


>gi|223459922|gb|AAI38451.1| Lrrc7 protein [Mus musculus]
          Length = 1398

 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 193/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 29  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSS 88

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 89  LPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 148

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 149 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 206

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 207 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 242

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 243 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 302

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 303 LSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 361

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 362 LEFLPEEIGQMQRLRVLNLSDNRLKNLP 389



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 197/416 (47%), Gaps = 27/416 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 22  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSI 81

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L+SLP S+A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 82  PDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 141

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 142 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 201

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+ +P ++ K   L   ++    + ++ D  +S   ++
Sbjct: 202 SELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETV-DMDISGCEAL 260

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                    D I  G+    K L+ + + DN LT 
Sbjct: 261 EDLLLSSNMLQQLP--------------------DSI--GLL---KKLTTLKVDDNQLTM 295

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    L E +   N++  L   I  L +L  L +  N L +LP  IG+ + +  +
Sbjct: 296 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 355

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
            L  NKLE LP EIG ++ L+ L L  N+L +LP +   L  L+ L + +N  +++
Sbjct: 356 SLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 411



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 181/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 98  NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 157

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 158 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLREL 217

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 218 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 277

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 278 GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLP----------------- 320

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                     PT       I + H               +L  + + +N L  LP ++G+
Sbjct: 321 ----------PT-------IGYLH---------------SLRTLAVDENFLPELPREIGS 348

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 349 CKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 408

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 409 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 438



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 72/133 (54%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + +  L +  + +T LP ++  L+ LEE     N+L SLP  IGY+ +L  L + EN L 
Sbjct: 281 KKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLP 340

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  + + + + V+ LR NKL  LP  + ++  L++L L  NR+K +      L  L+ 
Sbjct: 341 ELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAA 400

Query: 221 LSMRDNKIRELPP 233
           L + DN+ + L P
Sbjct: 401 LWLSDNQSKALIP 413


>gi|28972728|dbj|BAC65780.1| mKIAA1365 protein [Mus musculus]
          Length = 1497

 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 193/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 31  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSS 90

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 91  LPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 150

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 151 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 208

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 209 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 244

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 245 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 304

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 305 LSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 363

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 364 LEFLPEEIGQMQRLRVLNLSDNRLKNLP 391



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 197/416 (47%), Gaps = 27/416 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 24  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSI 83

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L+SLP S+A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 84  PDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 143

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 144 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 203

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+ +P ++ K   L   ++    + ++ D  +S   ++
Sbjct: 204 SELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETV-DMDISGCEAL 262

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                    D I  G+    K L+ + + DN LT 
Sbjct: 263 EDLLLSSNMLQQLP--------------------DSI--GLL---KKLTTLKVDDNQLTM 297

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    L E +   N++  L   I  L +L  L +  N L +LP  IG+ + +  +
Sbjct: 298 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 357

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
            L  NKLE LP EIG ++ L+ L L  N+L +LP +   L  L+ L + +N  +++
Sbjct: 358 SLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 413



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 181/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 100 NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 159

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 160 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLREL 219

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 220 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 279

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 280 GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLP----------------- 322

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                     PT       I + H               +L  + + +N L  LP ++G+
Sbjct: 323 ----------PT-------IGYLH---------------SLRTLAVDENFLPELPREIGS 350

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 351 CKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 410

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 411 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 440



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 72/133 (54%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + +  L +  + +T LP ++  L+ LEE     N+L SLP  IGY+ +L  L + EN L 
Sbjct: 283 KKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLP 342

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  + + + + V+ LR NKL  LP  + ++  L++L L  NR+K +      L  L+ 
Sbjct: 343 ELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAA 402

Query: 221 LSMRDNKIRELPP 233
           L + DN+ + L P
Sbjct: 403 LWLSDNQSKALIP 415


>gi|241779562|ref|XP_002399930.1| leucine rich domain-containing protein, putative [Ixodes
           scapularis]
 gi|215510641|gb|EEC20094.1| leucine rich domain-containing protein, putative [Ixodes
           scapularis]
          Length = 429

 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 204/398 (51%), Gaps = 29/398 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +++RVLD  H  L E+P  V+    +L+ LYL  N+IK +   + +   L  L++ DN I
Sbjct: 21  EEVRVLDYAHCGLEEVPSEVFNYERTLEELYLNANQIKDLPRPLFHCHGLRKLNLSDNDI 80

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LPP L  L  L  LD++ N++ E+P  I  C  L  ++   N +  +P+    LIN+ 
Sbjct: 81  QTLPPALSSLVGLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEGFTQLINIE 140

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
           +L L+   LE +P    +   L    +    L  LP  + + LT +  + + +N F    
Sbjct: 141 QLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSM-ARLTELVRLDIGQNDFAELA 199

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
           +                         +     +L+++   +N LT+LP  LG  V LT L
Sbjct: 200 T-------------------------VLESLPSLTELWCDNNRLTALPSYLGNLVKLTYL 234

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           +   N+IS ++E+I++L  L  L L+ N L+K+P ++G L+ L  L L++N L +LP+ I
Sbjct: 235 DASRNRISYVAEEIEHLAVLSDLTLTANKLQKVPETLGCLQSLTTLRLDDNHLATLPDSI 294

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G L +L+ LI+  N++ SLP  +G L +LS L   +N L+ +P EIG+   L  L L DN
Sbjct: 295 GQLCKLEELIINGNEIDSLPSTVGLLRSLSILIADDNLLEDLPPEIGSCGKLRVLSLRDN 354

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV-VGG 565
             L N+P EL     L++++L    L  +P  +  +GG
Sbjct: 355 R-LCNVPDELGHLGALRVVNLSGNQLRHLPVSLAKLGG 391



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 194/411 (47%), Gaps = 27/411 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR   E +  LD +   +  +P  V      LEELYL  N++  LP  + +   L  L L
Sbjct: 16  LRPAREEVRVLDYAHCGLEEVPSEVFNYERTLEELYLNANQIKDLPRPLFHCHGLRKLNL 75

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           ++N + +LP +L++L  L  LD+  N + E+P  +     L I+    N +  +      
Sbjct: 76  SDNDIQTLPPALSSLVGLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEGFTQ 135

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L N+  L + D  +  LP   G L  L  L+L  NHL+ LPK +   T LV LD+  N+ 
Sbjct: 136 LINIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELVRLDIGQNDF 195

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +  +L +L +LT L    NRL ++P  L   V L   +                    
Sbjct: 196 AELATVLESLPSLTELWCDNNRLTALPSYLGNLVKLTYLDA------------------- 236

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                SRN+ + Y +        +  +    N++ K+P  +    ++L+ + + DN L +
Sbjct: 237 -----SRNRIS-YVAEEIEHLAVLSDLTLTANKLQKVPETLGC-LQSLTTLRLDDNHLAT 289

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    L EL +  N+I  L   +  L +L +L+  +NLL+ LP  IG+  KL+ L
Sbjct: 290 LPDSIGQLCKLEELIINGNEIDSLPSTVGLLRSLSILIADDNLLEDLPPEIGSCGKLRVL 349

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
            L +N+L ++P+E+G L  L+ + L  NQL  LP ++  L  L  L + +N
Sbjct: 350 SLRDNRLCNVPDELGHLGALRVVNLSGNQLRHLPVSLAKLGGLHALWLSQN 400



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 163/338 (48%), Gaps = 30/338 (8%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD+SK+++  +P +++    L  +    N +  LP     + N+  L L +  L  LP +
Sbjct: 96  LDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEGFTQLINIEQLYLNDTFLEYLPAN 155

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
              L +L++L+LR N L  LP  + +LT L  L +  N    +   ++ L +L+ L   +
Sbjct: 156 FGRLSKLKILELRENHLKVLPKSMARLTELVRLDIGQNDFAELATVLESLPSLTELWCDN 215

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP  LG L  L  LD + N +  + +EI +  +L  L L  N+L  +P+ LG L 
Sbjct: 216 NRLTALPSYLGNLVKLTYLDASRNRISYVAEEIEHLAVLSDLTLTANKLQKVPETLGCLQ 275

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNK 343
           +LT LRL  N L ++P+++ +   L E  + G  + SLP   GLL SL+    I ++   
Sbjct: 276 SLTTLRLDDNHLATLPDSIGQLCKLEELIINGNEIDSLPSTVGLLRSLS----ILIA--- 328

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
                               + N ++ +P  I S  K L  ++++DN L ++P +LG   
Sbjct: 329 --------------------DDNLLEDLPPEIGSCGK-LRVLSLRDNRLCNVPDELGHLG 367

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
            L  +NL  NQ+  L   +  L  L  L LS N  K L
Sbjct: 368 ALRVVNLSGNQLRHLPVSLAKLGGLHALWLSQNQTKPL 405


>gi|16924000|ref|NP_476483.1| leucine-rich repeat-containing protein 7 [Rattus norvegicus]
 gi|1657758|gb|AAC52881.1| densin-180 [Rattus norvegicus]
 gi|149026336|gb|EDL82579.1| rCG28757, isoform CRA_b [Rattus norvegicus]
          Length = 1495

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 193/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 29  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSS 88

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 89  LPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 148

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 149 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 206

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 207 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 242

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 243 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 302

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 303 LSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 361

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 362 LEFLPEEIGQMQRLRVLNLSDNRLKNLP 389



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 197/416 (47%), Gaps = 27/416 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 22  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSI 81

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L+SLP S+A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 82  PDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 141

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 142 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 201

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+ +P ++ K   L   ++    + ++ D  +S   ++
Sbjct: 202 SELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETV-DMDISGCEAL 260

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                    D I  G+    K L+ + + DN LT 
Sbjct: 261 EDLLLSSNMLQQLP--------------------DSI--GLL---KKLTTLKVDDNQLTM 295

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    L E +   N++  L   I  L +L  L +  N L +LP  IG+ + +  +
Sbjct: 296 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 355

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
            L  NKLE LP EIG ++ L+ L L  N+L +LP +   L  L+ L + +N  +++
Sbjct: 356 SLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 411



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 181/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 98  NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 157

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 158 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLREL 217

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 218 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 277

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 278 GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLP----------------- 320

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                     PT       I + H               +L  + + +N L  LP ++G+
Sbjct: 321 ----------PT-------IGYLH---------------SLRTLAVDENFLPELPREIGS 348

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 349 CKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 408

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 409 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 438



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 72/133 (54%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + +  L +  + +T LP ++  L+ LEE     N+L SLP  IGY+ +L  L + EN L 
Sbjct: 281 KKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLP 340

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  + + + + V+ LR NKL  LP  + ++  L++L L  NR+K +      L  L+ 
Sbjct: 341 ELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAA 400

Query: 221 LSMRDNKIRELPP 233
           L + DN+ + L P
Sbjct: 401 LWLSDNQSKALIP 413


>gi|410948707|ref|XP_003981072.1| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Felis catus]
          Length = 1421

 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 211/464 (45%), Gaps = 50/464 (10%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q            
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q L  L L  N L  LP  +  L +L+ L +  N I+    +I+ 
Sbjct: 65  -----------LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKN 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 114 CKVLTVVEASVNPISKLPDGFSQLLNLXQLYLNDAFLEFLPANFGRLTKLQILELRENQL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE L +   L EF ++G  L+ +P G + SL  +
Sbjct: 174 KMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQL 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                         I+ I  GI S  +NL  + +  N L  
Sbjct: 233 TYLDVSKNN------------------------IEMIEEGI-SACENLQDLLLSSNSLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   +T L +  NQ+  L + I  L ++E L  S N ++ LPSS+G L  ++  
Sbjct: 268 LPETIGSLKNVTTLKIDENQLMYLPDSIGGLASIEELDCSFNEVEALPSSVGQLTNIRTF 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L+ LP EIG  K +  L L SN+L +LP  +G +  L  +++ +N L+++P   
Sbjct: 328 AADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ L  ++L+DN     IP +    S  Q M L N    Q P
Sbjct: 388 TKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQP 431



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 159/310 (51%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLXQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP ++  L QL  LDL  N+  E+P V+ +L+ LK  ++ 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD 215

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            NR+  +   I  L  L+ L +  N I  +   +   +NL  L L+ N L++LP+ IG+ 
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSL 275

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             + TL +  N+L+ +PD +G L ++  L  S+N +E++P ++ +  ++  F  +   L 
Sbjct: 276 KNVTTLKIDENQLMYLPDSIGGLASIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQ 335

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + S  +I  + L  NK    P   G  Q   V  IN   N++  +P+  F++ +
Sbjct: 336 QLPPE-IGSWKNITVLFLHSNKLETLPEEMGDMQKLKV--INLSDNRLKNLPFS-FTKLQ 391

Query: 381 NLSKVNMKDN 390
            L+ + + DN
Sbjct: 392 QLTAMWLSDN 401



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 113/219 (51%), Gaps = 25/219 (11%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 426 VNLEVLVLSNNLLKKLP-----------------------SSIGNLRKLKCLDLEENKLE 462
             L V+  S N + KLP                       ++ G L KL+ L+L EN+L+
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLXQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP  +  L +L+RL L SN+   +P  +  L+ L    +  N L  IP  IG+L+ L  
Sbjct: 175 MLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTY 234

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L ++ N  +  I   ++ C NLQ + L +  L Q+P  I
Sbjct: 235 LDVSKNN-IEMIEEGISACENLQDLLLSSNSLQQLPETI 272


>gi|384872582|sp|P70587.2|LRRC7_RAT RecName: Full=Leucine-rich repeat-containing protein 7; AltName:
           Full=Densin-180; Short=Densin; AltName: Full=Protein
           LAP1
          Length = 1490

 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 193/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 24  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSS 83

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 84  LPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 144 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 201

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 202 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 238 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 297

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 298 LSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 356

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 357 LEFLPEEIGQMQRLRVLNLSDNRLKNLP 384



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 197/416 (47%), Gaps = 27/416 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 17  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSI 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L+SLP S+A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 77  PDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 136

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 196

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+ +P ++ K   L   ++    + ++ D  +S   ++
Sbjct: 197 SELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETV-DMDISGCEAL 255

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                    D I  G+    K L+ + + DN LT 
Sbjct: 256 EDLLLSSNMLQQLP--------------------DSI--GLL---KKLTTLKVDDNQLTM 290

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    L E +   N++  L   I  L +L  L +  N L +LP  IG+ + +  +
Sbjct: 291 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
            L  NKLE LP EIG ++ L+ L L  N+L +LP +   L  L+ L + +N  +++
Sbjct: 351 SLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 181/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 93  NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 152

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 153 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLREL 212

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 213 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 272

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 273 GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLP----------------- 315

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                     PT       I + H               +L  + + +N L  LP ++G+
Sbjct: 316 ----------PT-------IGYLH---------------SLRTLAVDENFLPELPREIGS 343

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 344 CKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 403

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 404 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 433



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 72/133 (54%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + +  L +  + +T LP ++  L+ LEE     N+L SLP  IGY+ +L  L + EN L 
Sbjct: 276 KKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLP 335

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  + + + + V+ LR NKL  LP  + ++  L++L L  NR+K +      L  L+ 
Sbjct: 336 ELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAA 395

Query: 221 LSMRDNKIRELPP 233
           L + DN+ + L P
Sbjct: 396 LWLSDNQSKALIP 408


>gi|50400980|sp|Q80TE7.2|LRRC7_MOUSE RecName: Full=Leucine-rich repeat-containing protein 7; AltName:
           Full=Densin-180; Short=Densin; AltName: Full=Protein
           LAP1
          Length = 1490

 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 193/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 24  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSS 83

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 84  LPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 144 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 201

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 202 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 238 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 297

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 298 LSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 356

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 357 LEFLPEEIGQMQRLRVLNLSDNRLKNLP 384



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 197/416 (47%), Gaps = 27/416 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 17  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSI 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L+SLP S+A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 77  PDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 136

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 196

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+ +P ++ K   L   ++    + ++ D  +S   ++
Sbjct: 197 SELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETV-DMDISGCEAL 255

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                    D I  G+    K L+ + + DN LT 
Sbjct: 256 EDLLLSSNMLQQLP--------------------DSI--GLL---KKLTTLKVDDNQLTM 290

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    L E +   N++  L   I  L +L  L +  N L +LP  IG+ + +  +
Sbjct: 291 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
            L  NKLE LP EIG ++ L+ L L  N+L +LP +   L  L+ L + +N  +++
Sbjct: 351 SLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 181/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 93  NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 152

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 153 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLREL 212

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 213 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 272

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 273 GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLP----------------- 315

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                     PT       I + H               +L  + + +N L  LP ++G+
Sbjct: 316 ----------PT-------IGYLH---------------SLRTLAVDENFLPELPREIGS 343

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 344 CKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 403

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 404 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 433



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 72/133 (54%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + +  L +  + +T LP ++  L+ LEE     N+L SLP  IGY+ +L  L + EN L 
Sbjct: 276 KKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLP 335

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  + + + + V+ LR NKL  LP  + ++  L++L L  NR+K +      L  L+ 
Sbjct: 336 ELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAA 395

Query: 221 LSMRDNKIRELPP 233
           L + DN+ + L P
Sbjct: 396 LWLSDNQSKALIP 408


>gi|12853204|dbj|BAB29680.1| unnamed protein product [Mus musculus]
 gi|148703017|gb|EDL34964.1| RIKEN cDNA 4930558O21, isoform CRA_a [Mus musculus]
          Length = 581

 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 233/507 (45%), Gaps = 72/507 (14%)

Query: 59  VDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPP 118
           +D  KT+T +           +KKEP Q     ++ F          +D S   +  +P 
Sbjct: 16  IDTFKTLTKELLRQEHLPKVLQKKEPHQL---TDRTFF---------IDGSNQGLKTIPS 63

Query: 119 SVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL------------------- 159
            +  L  LEE++L  N++A +P  I  + N   L L  NSL                   
Sbjct: 64  EILALKELEEVHLENNQIAEIPQGIQQLQNTKVLYLHNNSLQDLCPELGALSSLESLDLS 123

Query: 160 ----------------------------TSLPDSLA-NLQQLRVLDLRHNKLNELPMVVY 190
                                       T +P  +  +L  L +  L  N L  LP  + 
Sbjct: 124 GNPLVISSLHVVSRLRTLRELRLYRTGLTEIPTGICKSLHHLELFGLSENFLESLPEEIV 183

Query: 191 KLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
             T L+ +YL+ N  +    D+  L NL ++ + +NK++ +P ++G L  L    +A NH
Sbjct: 184 NQTKLREIYLKQNHFEVFPCDLCVLYNLEVIDLDENKLKSIPGDIGHLVRLQKFYVASNH 243

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           L  LP+ +  C+ L  LDL HN + ++P  L  L  LT + LS NRLE VP  L   V L
Sbjct: 244 LMSLPESLSQCSKLSVLDLTHNSIHSLPSSLELLTELTEVGLSGNRLEKVPRLLCSWVSL 303

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN---FEHNQ 367
           +   +   +L  L D     L ++  + LS+N    +    P Q  ++ ++     + N+
Sbjct: 304 HLLYLRNTSLHGLRDS-FKRLINLRFLDLSQNHIEHF----PVQICALKNLEILALDDNK 358

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS---EDIQN 424
           + ++P  I S   NL  + +  N L S P ++ + + L +L +G +Q SKLS   E+I+ 
Sbjct: 359 VRQLPPSI-SLLSNLKILGLTGNDLLSFPEEIFSLISLEKLYIGQDQGSKLSSLPENIKR 417

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           L+NL+ L + NN L++LP+S+G +  L+ LD   N L+ LP+ I   + L+ L+L+ N L
Sbjct: 418 LMNLKELYIENNRLEQLPASLGLMPNLEVLDCRHNLLKQLPDAICRTRNLRELLLEDNLL 477

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIP 511
             LP  + HL NL  L++  N +   P
Sbjct: 478 CCLPENLDHLVNLKVLTLMNNPMVDPP 504



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 200/432 (46%), Gaps = 55/432 (12%)

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ---- 213
            L ++P  +  L++L  + L +N++ E+P  + +L + K+LYL  N ++ + P++     
Sbjct: 57  GLKTIPSEILALKELEEVHLENNQIAEIPQGIQQLQNTKVLYLHNNSLQDLCPELGALSS 116

Query: 214 -----------YLSNLSMLSMRD---------NKIRELPPELGE-LKNLVTLDLAHNHLE 252
                       +S+L ++S              + E+P  + + L +L    L+ N LE
Sbjct: 117 LESLDLSGNPLVISSLHVVSRLRTLRELRLYRTGLTEIPTGICKSLHHLELFGLSENFLE 176

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
            LP+EI N T L  + L+ N     P  L  L NL  + L  N+L+S+P  +   V L +
Sbjct: 177 SLPEEIVNQTKLREIYLKQNHFEVFPCDLCVLYNLEVIDLDENKLKSIPGDIGHLVRLQK 236

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
           F V    L SLP+ L                         +Q + +  ++  HN I  +P
Sbjct: 237 FYVASNHLMSLPESL-------------------------SQCSKLSVLDLTHNSIHSLP 271

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             +      L++V +  N L  +P  L +WV L  L L    +  L +  + L+NL  L 
Sbjct: 272 SSL-ELLTELTEVGLSGNRLEKVPRLLCSWVSLHLLYLRNTSLHGLRDSFKRLINLRFLD 330

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           LS N ++  P  I  L+ L+ L L++NK+  LP  I  L  L+ L L  N L+S P  I 
Sbjct: 331 LSQNHIEHFPVQICALKNLEILALDDNKVRQLPPSISLLSNLKILGLTGNDLLSFPEEIF 390

Query: 493 HLTNLSYLSVGENN---LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
            L +L  L +G++    L S+PE I  L NL  LY+ +N  L  +P  L L  NL+++  
Sbjct: 391 SLISLEKLYIGQDQGSKLSSLPENIKRLMNLKELYIENNR-LEQLPASLGLMPNLEVLDC 449

Query: 550 DNCPLSQIPSEI 561
            +  L Q+P  I
Sbjct: 450 RHNLLKQLPDAI 461



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 168/353 (47%), Gaps = 52/353 (14%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+  +DL ++ +  +P  +  L  L++ Y+  N L SLP  +   + L+ L L  N
Sbjct: 206 CVLYNLEVIDLDENKLKSIPGDIGHLVRLQKFYVASNHLMSLPESLSQCSKLSVLDLTHN 265

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           S+ SLP SL  L +L  + L  N+L ++P ++    SL +LYLR   +  +    + L N
Sbjct: 266 SIHSLPSSLELLTELTEVGLSGNRLEKVPRLLCSWVSLHLLYLRNTSLHGLRDSFKRLIN 325

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N I   P ++  LKNL  L L  N + +LP  I   + L  L L  N+L++ 
Sbjct: 326 LRFLDLSQNHIEHFPVQICALKNLEILALDDNKVRQLPPSISLLSNLKILGLTGNDLLSF 385

Query: 278 PDMLGNLINLTRLRLSYN---RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           P+ + +LI+L +L +  +   +L S+PE + + ++L E  +E   L  LP    +SL  +
Sbjct: 386 PEEIFSLISLEKLYIGQDQGSKLSSLPENIKRLMNLKELYIENNRLEQLP----ASLGLM 441

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            N+ +                     ++  HN + ++P  I  R +NL ++ ++DNLL  
Sbjct: 442 PNLEV---------------------LDCRHNLLKQLPDAI-CRTRNLRELLLEDNLLCC 479

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
           LP                       E++ +LVNL+VL L NN +   P  + N
Sbjct: 480 LP-----------------------ENLDHLVNLKVLTLMNNPMVDPPIYVCN 509



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 104/241 (43%), Gaps = 47/241 (19%)

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
           + +IP GI     +L    + +N L SLP ++     L E+ L  N       D+  L N
Sbjct: 151 LTEIPTGICKSLHHLELFGLSENFLESLPEEIVNQTKLREIYLKQNHFEVFPCDLCVLYN 210

Query: 428 LEVLVLSNNLLKKLPSSIGNL-----------------------RKLKCLDLEENKLESL 464
           LEV+ L  N LK +P  IG+L                        KL  LDL  N + SL
Sbjct: 211 LEVIDLDENKLKSIPGDIGHLVRLQKFYVASNHLMSLPESLSQCSKLSVLDLTHNSIHSL 270

Query: 465 PNEIGFLKELQRLILQSNQLVSLPR-----------------------AIGHLTNLSYLS 501
           P+ +  L EL  + L  N+L  +PR                       +   L NL +L 
Sbjct: 271 PSSLELLTELTEVGLSGNRLEKVPRLLCSWVSLHLLYLRNTSLHGLRDSFKRLINLRFLD 330

Query: 502 VGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           + +N+++  P +I  L+NL  L L+DN  +  +P  ++L SNL+I+ L    L   P EI
Sbjct: 331 LSQNHIEHFPVQICALKNLEILALDDNK-VRQLPPSISLLSNLKILGLTGNDLLSFPEEI 389

Query: 562 V 562
            
Sbjct: 390 F 390


>gi|146328669|ref|YP_001208947.1| leucine rich repeat domain-containing protein [Dichelobacter
           nodosus VCS1703A]
 gi|146232139|gb|ABQ13117.1| Leucine Rich Repeat domain protein [Dichelobacter nodosus VCS1703A]
          Length = 460

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 208/422 (49%), Gaps = 61/422 (14%)

Query: 116 LPPSVEKLTHLEELYLYGN------------KLASLPSQIGYVTNLTCLGLAENSLTSLP 163
           LP   E+L  +EEL  Y N            K+  LP +IG++T L  L L+ +  + LP
Sbjct: 34  LPRDKERLLAMEELRFYRNEADESYQFSKYPKITLLPPEIGHLTQLKTLNLSHSECSYLP 93

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
             +  L+QL+                    SL + + RFN   T+ P+I  L +L  L++
Sbjct: 94  PEIGQLKQLQ--------------------SLNLCWCRFN---TLPPEIGQLESLQYLNL 130

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
               +  LP E+G+LK L  L +    L +LP EIG  + L  L L   +L+ +P+ LG 
Sbjct: 131 EWGSLATLPKEIGQLKQLRRLSIQSYALTDLPAEIGQLSALEDLSLSCIQLMTLPEELGQ 190

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L N   L L  N+L+ +PE+L     L      G     LP+       SI N+      
Sbjct: 191 LKNCRSLLLDCNQLQQLPESLGALEQLQFLTFRGGMFQKLPE-------SIGNL------ 237

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
                         +++++  H  I ++P  I  +   L ++++  N L  LP ++G   
Sbjct: 238 ------------VQLHTLSASHTLISRLPSTI-GQLIYLQELDLSSNQLEVLPPEIGKLK 284

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            L +L+L  N +  L  +I +L+NLE L + +N L  LP++IG L+KL  L L+ N+L S
Sbjct: 285 QLKKLHLNNNVLKVLPPEIGHLINLESLQIWSNHLIALPATIGQLKKLAELHLKNNELIS 344

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           LPNEIG L+ LQ L +++NQL  LP  IG L  L+ L + +N L  +P+E+  L +++ L
Sbjct: 345 LPNEIGRLQALQTLDIRNNQLAQLPVEIGLLMQLTKLEIRDNRLSDLPDELWALSDMNQL 404

Query: 524 YL 525
            L
Sbjct: 405 KL 406



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/335 (33%), Positives = 168/335 (50%), Gaps = 27/335 (8%)

Query: 227 KIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           KI  LPPE+G L  L TL+L+H+    LP EIG    L +L+L       +P  +G L +
Sbjct: 65  KITLLPPEIGHLTQLKTLNLSHSECSYLPPEIGQLKQLQSLNLCWCRFNTLPPEIGQLES 124

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L L +  L ++P+ + +   L   +++  AL+ LP   +  L+++ +++LS  +   
Sbjct: 125 LQYLNLEWGSLATLPKEIGQLKQLRRLSIQSYALTDLP-AEIGQLSALEDLSLSCIQLMT 183

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P                             + KN   + +  N L  LP  LG    L 
Sbjct: 184 LPEE-------------------------LGQLKNCRSLLLDCNQLQQLPESLGALEQLQ 218

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L        KL E I NLV L  L  S+ L+ +LPS+IG L  L+ LDL  N+LE LP 
Sbjct: 219 FLTFRGGMFQKLPESIGNLVQLHTLSASHTLISRLPSTIGQLIYLQELDLSSNQLEVLPP 278

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
           EIG LK+L++L L +N L  LP  IGHL NL  L +  N+L ++P  IG L+ L  L+L 
Sbjct: 279 EIGKLKQLKKLHLNNNVLKVLPPEIGHLINLESLQIWSNHLIALPATIGQLKKLAELHLK 338

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +N  + ++P E+     LQ + + N  L+Q+P EI
Sbjct: 339 NNELI-SLPNEIGRLQALQTLDIRNNQLAQLPVEI 372



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 175/368 (47%), Gaps = 26/368 (7%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           IT LPP +  LT L+ L L  ++ + LP +IG +  L  L L      +LP  +  L+ L
Sbjct: 66  ITLLPPEIGHLTQLKTLNLSHSECSYLPPEIGQLKQLQSLNLCWCRFNTLPPEIGQLESL 125

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
           + L+L    L  LP  + +L  L+ L ++   +  +  +I  LS L  LS+   ++  LP
Sbjct: 126 QYLNLEWGSLATLPKEIGQLKQLRRLSIQSYALTDLPAEIGQLSALEDLSLSCIQLMTLP 185

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            ELG+LKN  +L L  N L++LP+ +G    L  L  +      +P+ +GNL+ L  L  
Sbjct: 186 EELGQLKNCRSLLLDCNQLQQLPESLGALEQLQFLTFRGGMFQKLPESIGNLVQLHTLSA 245

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           S+  +  +P T+ + ++L E ++    L  LP                       P  G 
Sbjct: 246 SHTLISRLPSTIGQLIYLQELDLSSNQLEVLP-----------------------PEIGK 282

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
            +      +N   N + K+         NL  + +  N L +LP  +G    L EL+L  
Sbjct: 283 LKQLKKLHLN---NNVLKVLPPEIGHLINLESLQIWSNHLIALPATIGQLKKLAELHLKN 339

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N++  L  +I  L  L+ L + NN L +LP  IG L +L  L++ +N+L  LP+E+  L 
Sbjct: 340 NELISLPNEIGRLQALQTLDIRNNQLAQLPVEIGLLMQLTKLEIRDNRLSDLPDELWALS 399

Query: 473 ELQRLILQ 480
           ++ +L L+
Sbjct: 400 DMNQLKLE 407



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 175/328 (53%), Gaps = 3/328 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS S  ++LPP + +L  L+ L L   +  +LP +IG + +L  L L   SL +LP  
Sbjct: 82  LNLSHSECSYLPPEIGQLKQLQSLNLCWCRFNTLPPEIGQLESLQYLNLEWGSLATLPKE 141

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+QLR L ++   L +LP  + +L++L+ L L   ++ T+  ++  L N   L +  
Sbjct: 142 IGQLKQLRRLSIQSYALTDLPAEIGQLSALEDLSLSCIQLMTLPEELGQLKNCRSLLLDC 201

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++++LP  LG L+ L  L       ++LP+ IGN   L TL   H  +  +P  +G LI
Sbjct: 202 NQLQQLPESLGALEQLQFLTFRGGMFQKLPESIGNLVQLHTLSASHTLISRLPSTIGQLI 261

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LS N+LE +P  + K   L + ++    L  LP   +  L ++ ++ +  N   
Sbjct: 262 YLQELDLSSNQLEVLPPEIGKLKQLKKLHLNNNVLKVLPPE-IGHLINLESLQIWSNHLI 320

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           A P+    Q   +  ++ ++N++  +P  I  R + L  +++++N L  LP+++G  + L
Sbjct: 321 ALPA-TIGQLKKLAELHLKNNELISLPNEI-GRLQALQTLDIRNNQLAQLPVEIGLLMQL 378

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVL 433
           T+L +  N++S L +++  L ++  L L
Sbjct: 379 TKLEIRDNRLSDLPDELWALSDMNQLKL 406



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 139/283 (49%), Gaps = 11/283 (3%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +L LS   +  LP  + +L +   L L  N+L  LP  +G +  L  L         LP+
Sbjct: 173 DLSLSCIQLMTLPEELGQLKNCRSLLLDCNQLQQLPESLGALEQLQFLTFRGGMFQKLPE 232

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
           S+ NL QL  L   H  ++ LP  + +L  L+ L L  N+++ + P+I  L  L  L + 
Sbjct: 233 SIGNLVQLHTLSASHTLISRLPSTIGQLIYLQELDLSSNQLEVLPPEIGKLKQLKKLHLN 292

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           +N ++ LPPE+G L NL +L +  NHL  LP  IG    L  L L++NEL+++P+ +G L
Sbjct: 293 NNVLKVLPPEIGHLINLESLQIWSNHLIALPATIGQLKKLAELHLKNNELISLPNEIGRL 352

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR--- 341
             L  L +  N+L  +P  +   + L +  +    LS LPD L  +L+ +N + L R   
Sbjct: 353 QALQTLDIRNNQLAQLPVEIGLLMQLTKLEIRDNRLSDLPDELW-ALSDMNQLKLERFIK 411

Query: 342 -----NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY--GIFS 377
                N   A  +      + V  I  + NQ+D+  +  G FS
Sbjct: 412 RGQRINVQEALSAAAEENSSYVPPILLDRNQVDEEDFWDGEFS 454



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 115/216 (53%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N  +L L  + +  LP S+  L  L+ L   G     LP  IG +  L  L  +   ++
Sbjct: 192 KNCRSLLLDCNQLQQLPESLGALEQLQFLTFRGGMFQKLPESIGNLVQLHTLSASHTLIS 251

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP ++  L  L+ LDL  N+L  LP  + KL  LK L+L  N +K + P+I +L NL  
Sbjct: 252 RLPSTIGQLIYLQELDLSSNQLEVLPPEIGKLKQLKKLHLNNNVLKVLPPEIGHLINLES 311

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N +  LP  +G+LK L  L L +N L  LP EIG    L TLD+++N+L  +P  
Sbjct: 312 LQIWSNHLIALPATIGQLKKLAELHLKNNELISLPNEIGRLQALQTLDIRNNQLAQLPVE 371

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE 316
           +G L+ LT+L +  NRL  +P+ L     +N+  +E
Sbjct: 372 IGLLMQLTKLEIRDNRLSDLPDELWALSDMNQLKLE 407


>gi|149026335|gb|EDL82578.1| rCG28757, isoform CRA_a [Rattus norvegicus]
          Length = 1506

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 193/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 40  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSS 99

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 100 LPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 159

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 160 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 217

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 218 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 253

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 254 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 313

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 314 LSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 372

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 373 LEFLPEEIGQMQRLRVLNLSDNRLKNLP 400



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 197/416 (47%), Gaps = 27/416 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 33  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSI 92

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L+SLP S+A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 93  PDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 152

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 153 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 212

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+ +P ++ K   L   ++    + ++ D  +S   ++
Sbjct: 213 SELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETV-DMDISGCEAL 271

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                    D I  G+    K L+ + + DN LT 
Sbjct: 272 EDLLLSSNMLQQLP--------------------DSI--GLL---KKLTTLKVDDNQLTM 306

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    L E +   N++  L   I  L +L  L +  N L +LP  IG+ + +  +
Sbjct: 307 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 366

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
            L  NKLE LP EIG ++ L+ L L  N+L +LP +   L  L+ L + +N  +++
Sbjct: 367 SLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 422



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 181/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 109 NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 168

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 169 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLREL 228

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 229 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 288

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 289 GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLP----------------- 331

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                     PT       I + H               +L  + + +N L  LP ++G+
Sbjct: 332 ----------PT-------IGYLH---------------SLRTLAVDENFLPELPREIGS 359

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 360 CKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 419

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 420 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 449



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 72/133 (54%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + +  L +  + +T LP ++  L+ LEE     N+L SLP  IGY+ +L  L + EN L 
Sbjct: 292 KKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLP 351

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  + + + + V+ LR NKL  LP  + ++  L++L L  NR+K +      L  L+ 
Sbjct: 352 ELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAA 411

Query: 221 LSMRDNKIRELPP 233
           L + DN+ + L P
Sbjct: 412 LWLSDNQSKALIP 424


>gi|148679900|gb|EDL11847.1| mCG11661 [Mus musculus]
          Length = 1506

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 193/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 40  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSS 99

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 100 LPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 159

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 160 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 217

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 218 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 253

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 254 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 313

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 314 LSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 372

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 373 LEFLPEEIGQMQRLRVLNLSDNRLKNLP 400



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 197/416 (47%), Gaps = 27/416 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 33  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSI 92

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L+SLP S+A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 93  PDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 152

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 153 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 212

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+ +P ++ K   L   ++    + ++ D  +S   ++
Sbjct: 213 SELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETV-DMDISGCEAL 271

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                    D I  G+    K L+ + + DN LT 
Sbjct: 272 EDLLLSSNMLQQLP--------------------DSI--GLL---KKLTTLKVDDNQLTM 306

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    L E +   N++  L   I  L +L  L +  N L +LP  IG+ + +  +
Sbjct: 307 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 366

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
            L  NKLE LP EIG ++ L+ L L  N+L +LP +   L  L+ L + +N  +++
Sbjct: 367 SLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 422



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 181/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 109 NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 168

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 169 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLREL 228

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 229 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 288

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 289 GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLP----------------- 331

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                     PT       I + H               +L  + + +N L  LP ++G+
Sbjct: 332 ----------PT-------IGYLH---------------SLRTLAVDENFLPELPREIGS 359

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 360 CKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 419

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 420 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 449



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 72/133 (54%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + +  L +  + +T LP ++  L+ LEE     N+L SLP  IGY+ +L  L + EN L 
Sbjct: 292 KKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLP 351

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  + + + + V+ LR NKL  LP  + ++  L++L L  NR+K +      L  L+ 
Sbjct: 352 ELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAA 411

Query: 221 LSMRDNKIRELPP 233
           L + DN+ + L P
Sbjct: 412 LWLSDNQSKALIP 424


>gi|124286820|ref|NP_080944.2| leucine-rich repeat and IQ domain-containing protein 4 [Mus
           musculus]
 gi|187659940|sp|A6H6A4.1|LRIQ4_MOUSE RecName: Full=Leucine-rich repeat and IQ domain-containing protein
           4
 gi|148703018|gb|EDL34965.1| RIKEN cDNA 4930558O21, isoform CRA_b [Mus musculus]
 gi|148878288|gb|AAI45807.1| Leucine-rich repeats and IQ motif containing 4 [Mus musculus]
          Length = 596

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 233/507 (45%), Gaps = 72/507 (14%)

Query: 59  VDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPP 118
           +D  KT+T +           +KKEP Q     ++ F          +D S   +  +P 
Sbjct: 31  IDTFKTLTKELLRQEHLPKVLQKKEPHQL---TDRTFF---------IDGSNQGLKTIPS 78

Query: 119 SVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL------------------- 159
            +  L  LEE++L  N++A +P  I  + N   L L  NSL                   
Sbjct: 79  EILALKELEEVHLENNQIAEIPQGIQQLQNTKVLYLHNNSLQDLCPELGALSSLESLDLS 138

Query: 160 ----------------------------TSLPDSLA-NLQQLRVLDLRHNKLNELPMVVY 190
                                       T +P  +  +L  L +  L  N L  LP  + 
Sbjct: 139 GNPLVISSLHVVSRLRTLRELRLYRTGLTEIPTGICKSLHHLELFGLSENFLESLPEEIV 198

Query: 191 KLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
             T L+ +YL+ N  +    D+  L NL ++ + +NK++ +P ++G L  L    +A NH
Sbjct: 199 NQTKLREIYLKQNHFEVFPCDLCVLYNLEVIDLDENKLKSIPGDIGHLVRLQKFYVASNH 258

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           L  LP+ +  C+ L  LDL HN + ++P  L  L  LT + LS NRLE VP  L   V L
Sbjct: 259 LMSLPESLSQCSKLSVLDLTHNSIHSLPSSLELLTELTEVGLSGNRLEKVPRLLCSWVSL 318

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN---FEHNQ 367
           +   +   +L  L D     L ++  + LS+N    +    P Q  ++ ++     + N+
Sbjct: 319 HLLYLRNTSLHGLRDS-FKRLINLRFLDLSQNHIEHF----PVQICALKNLEILALDDNK 373

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS---EDIQN 424
           + ++P  I S   NL  + +  N L S P ++ + + L +L +G +Q SKLS   E+I+ 
Sbjct: 374 VRQLPPSI-SLLSNLKILGLTGNDLLSFPEEIFSLISLEKLYIGQDQGSKLSSLPENIKR 432

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           L+NL+ L + NN L++LP+S+G +  L+ LD   N L+ LP+ I   + L+ L+L+ N L
Sbjct: 433 LMNLKELYIENNRLEQLPASLGLMPNLEVLDCRHNLLKQLPDAICRTRNLRELLLEDNLL 492

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIP 511
             LP  + HL NL  L++  N +   P
Sbjct: 493 CCLPENLDHLVNLKVLTLMNNPMVDPP 519



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 201/435 (46%), Gaps = 55/435 (12%)

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ- 213
           +   L ++P  +  L++L  + L +N++ E+P  + +L + K+LYL  N ++ + P++  
Sbjct: 69  SNQGLKTIPSEILALKELEEVHLENNQIAEIPQGIQQLQNTKVLYLHNNSLQDLCPELGA 128

Query: 214 --------------YLSNLSMLSMRD---------NKIRELPPELGE-LKNLVTLDLAHN 249
                          +S+L ++S              + E+P  + + L +L    L+ N
Sbjct: 129 LSSLESLDLSGNPLVISSLHVVSRLRTLRELRLYRTGLTEIPTGICKSLHHLELFGLSEN 188

Query: 250 HLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVH 309
            LE LP+EI N T L  + L+ N     P  L  L NL  + L  N+L+S+P  +   V 
Sbjct: 189 FLESLPEEIVNQTKLREIYLKQNHFEVFPCDLCVLYNLEVIDLDENKLKSIPGDIGHLVR 248

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
           L +F V    L SLP+ L                         +Q + +  ++  HN I 
Sbjct: 249 LQKFYVASNHLMSLPESL-------------------------SQCSKLSVLDLTHNSIH 283

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
            +P  +      L++V +  N L  +P  L +WV L  L L    +  L +  + L+NL 
Sbjct: 284 SLPSSL-ELLTELTEVGLSGNRLEKVPRLLCSWVSLHLLYLRNTSLHGLRDSFKRLINLR 342

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR 489
            L LS N ++  P  I  L+ L+ L L++NK+  LP  I  L  L+ L L  N L+S P 
Sbjct: 343 FLDLSQNHIEHFPVQICALKNLEILALDDNKVRQLPPSISLLSNLKILGLTGNDLLSFPE 402

Query: 490 AIGHLTNLSYLSVGENN---LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQI 546
            I  L +L  L +G++    L S+PE I  L NL  LY+ +N  L  +P  L L  NL++
Sbjct: 403 EIFSLISLEKLYIGQDQGSKLSSLPENIKRLMNLKELYIENNR-LEQLPASLGLMPNLEV 461

Query: 547 MSLDNCPLSQIPSEI 561
           +   +  L Q+P  I
Sbjct: 462 LDCRHNLLKQLPDAI 476



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 168/353 (47%), Gaps = 52/353 (14%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+  +DL ++ +  +P  +  L  L++ Y+  N L SLP  +   + L+ L L  N
Sbjct: 221 CVLYNLEVIDLDENKLKSIPGDIGHLVRLQKFYVASNHLMSLPESLSQCSKLSVLDLTHN 280

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           S+ SLP SL  L +L  + L  N+L ++P ++    SL +LYLR   +  +    + L N
Sbjct: 281 SIHSLPSSLELLTELTEVGLSGNRLEKVPRLLCSWVSLHLLYLRNTSLHGLRDSFKRLIN 340

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N I   P ++  LKNL  L L  N + +LP  I   + L  L L  N+L++ 
Sbjct: 341 LRFLDLSQNHIEHFPVQICALKNLEILALDDNKVRQLPPSISLLSNLKILGLTGNDLLSF 400

Query: 278 PDMLGNLINLTRLRLSYN---RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           P+ + +LI+L +L +  +   +L S+PE + + ++L E  +E   L  LP    +SL  +
Sbjct: 401 PEEIFSLISLEKLYIGQDQGSKLSSLPENIKRLMNLKELYIENNRLEQLP----ASLGLM 456

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            N+ +                     ++  HN + ++P  I  R +NL ++ ++DNLL  
Sbjct: 457 PNLEV---------------------LDCRHNLLKQLPDAI-CRTRNLRELLLEDNLLCC 494

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
           LP                       E++ +LVNL+VL L NN +   P  + N
Sbjct: 495 LP-----------------------ENLDHLVNLKVLTLMNNPMVDPPIYVCN 524


>gi|357625551|gb|EHJ75953.1| putative Erbb2 interacting protein isoform 2 [Danaus plexippus]
          Length = 722

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/386 (32%), Positives = 205/386 (53%), Gaps = 8/386 (2%)

Query: 146 VTNLTCLGLAENSLTSLPDSLANLQQ-LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR 204
           V ++  L  + +SLT +P  +   ++ L  L  + N++ ELP  ++    LK L L  N 
Sbjct: 13  VEDIVELDYSHHSLTDVPTEVFVYERTLETLLCQSNRITELPRQLFMCHGLKYLDLSDNE 72

Query: 205 IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTML 264
           ++ +   I  L NL  L++  N +  +P  +  LKNL+ LDL+ N LE+LP+ I N   +
Sbjct: 73  LQAIPTAISSLVNLQHLNLSRNTLASIPDNMKSLKNLMFLDLSVNPLEKLPETITNLIAM 132

Query: 265 VTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
             L L    L  +P   G L NL  L L  N L  +P++LS+   L   ++        P
Sbjct: 133 QDLYLNDTYLEYLPGNFGRLANLRILELRDNYLMILPKSLSRSTDLLRLDIGQNEFQQFP 192

Query: 325 DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP--YGIFSRAKNL 382
           + ++   + +  + +  N FT  P+       ++  +   +N I+++    G  SR ++L
Sbjct: 193 E-VIGRFSKLKELWIDSNSFTIIPAVI-KPLDNLIHLEASNNMIEELAPEIGYCSRLEDL 250

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
           +   +  N LT LP  +G    LT L L  N++  + E I  L NLE L+L +N + KLP
Sbjct: 251 T---LSVNSLTQLPDTIGQLSNLTALKLDNNRLYSIPESIGQLKNLEELMLMSNYIDKLP 307

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
           SSIG LRKL+ L+++EN L  +P EIG   +L  L ++SN+L  +P  IGHLT+L  L++
Sbjct: 308 SSIGLLRKLQYLNVDENMLRVIPPEIGSCAKLSVLSVRSNKLTKIPPEIGHLTSLRVLNL 367

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDN 528
             N+L  +P+ +   +NL  L+L++N
Sbjct: 368 VRNSLSYLPQSLLNCDNLVALWLSEN 393



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 187/354 (52%), Gaps = 7/354 (1%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           IT LP  +     L+ L L  N+L ++P+ I  + NL  L L+ N+L S+PD++ +L+ L
Sbjct: 50  ITELPRQLFMCHGLKYLDLSDNELQAIPTAISSLVNLQHLNLSRNTLASIPDNMKSLKNL 109

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
             LDL  N L +LP  +  L +++ LYL    ++ +  +   L+NL +L +RDN +  LP
Sbjct: 110 MFLDLSVNPLEKLPETITNLIAMQDLYLNDTYLEYLPGNFGRLANLRILELRDNYLMILP 169

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             L    +L+ LD+  N  ++ P+ IG  + L  L +  N    IP ++  L NL  L  
Sbjct: 170 KSLSRSTDLLRLDIGQNEFQQFPEVIGRFSKLKELWIDSNSFTIIPAVIKPLDNLIHLEA 229

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTAYPSG 350
           S N +E +   +  C  L +  +   +L+ LPD  G LS+LT++    L  N+  + P  
Sbjct: 230 SNNMIEELAPEIGYCSRLEDLTLSVNSLTQLPDTIGQLSNLTALK---LDNNRLYSIPES 286

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              Q  ++  +    N IDK+P  I    + L  +N+ +N+L  +P ++G+   L+ L++
Sbjct: 287 I-GQLKNLEELMLMSNYIDKLPSSI-GLLRKLQYLNVDENMLRVIPPEIGSCAKLSVLSV 344

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
            +N+++K+  +I +L +L VL L  N L  LP S+ N   L  L L EN+ + L
Sbjct: 345 RSNKLTKIPPEIGHLTSLRVLNLVRNSLSYLPQSLLNCDNLVALWLSENQSKPL 398



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 161/343 (46%), Gaps = 53/343 (15%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N++ LDLS + +  LP ++  L  +++LYL    L  LP   G + NL  L L +N L 
Sbjct: 107 KNLMFLDLSVNPLEKLPETITNLIAMQDLYLNDTYLEYLPGNFGRLANLRILELRDNYLM 166

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP SL+    L  LD+  N+  + P V+ + + LK L++  N    +            
Sbjct: 167 ILPKSLSRSTDLLRLDIGQNEFQQFPEVIGRFSKLKELWIDSNSFTII------------ 214

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
                      P  +  L NL+ L+ ++N +EEL  EIG C+ L  L L  N L  +PD 
Sbjct: 215 -----------PAVIKPLDNLIHLEASNNMIEELAPEIGYCSRLEDLTLSVNSLTQLPDT 263

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNIT 338
           +G L NLT L+L  NRL S+PE++ +  +L E  +    +  LP   GLL  L       
Sbjct: 264 IGQLSNLTALKLDNNRLYSIPESIGQLKNLEELMLMSNYIDKLPSSIGLLRKL------- 316

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
                          Q+     +N + N +  IP  I S AK LS ++++ N LT +P +
Sbjct: 317 ---------------QY-----LNVDENMLRVIPPEIGSCAK-LSVLSVRSNKLTKIPPE 355

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           +G    L  LNL  N +S L + + N  NL  L LS N  K L
Sbjct: 356 IGHLTSLRVLNLVRNSLSYLPQSLLNCDNLVALWLSENQSKPL 398



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 110/212 (51%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           +  ++L LD+ ++     P  + + + L+EL++  N    +P+ I  + NL  L  + N 
Sbjct: 174 RSTDLLRLDIGQNEFQQFPEVIGRFSKLKELWIDSNSFTIIPAVIKPLDNLIHLEASNNM 233

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           +  L   +    +L  L L  N L +LP  + +L++L  L L  NR+ ++   I  L NL
Sbjct: 234 IEELAPEIGYCSRLEDLTLSVNSLTQLPDTIGQLSNLTALKLDNNRLYSIPESIGQLKNL 293

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L +  N I +LP  +G L+ L  L++  N L  +P EIG+C  L  L ++ N+L  IP
Sbjct: 294 EELMLMSNYIDKLPSSIGLLRKLQYLNVDENMLRVIPPEIGSCAKLSVLSVRSNKLTKIP 353

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
             +G+L +L  L L  N L  +P++L  C +L
Sbjct: 354 PEIGHLTSLRVLNLVRNSLSYLPQSLLNCDNL 385



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 131/299 (43%), Gaps = 28/299 (9%)

Query: 264 LVTLDLQHNELVNIP-DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
           +V LD  H+ L ++P ++      L  L    NR+  +P  L  C  L   ++    L +
Sbjct: 16  IVELDYSHHSLTDVPTEVFVYERTLETLLCQSNRITELPRQLFMCHGLKYLDLSDNELQA 75

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P  + SSL ++ ++ LSR                        N +  IP  + S  KNL
Sbjct: 76  IPTAI-SSLVNLQHLNLSR------------------------NTLASIPDNMKS-LKNL 109

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             +++  N L  LP  +   + + +L L    +  L  +   L NL +L L +N L  LP
Sbjct: 110 MFLDLSVNPLEKLPETITNLIAMQDLYLNDTYLEYLPGNFGRLANLRILELRDNYLMILP 169

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
            S+     L  LD+ +N+ +  P  IG   +L+ L + SN    +P  I  L NL +L  
Sbjct: 170 KSLSRSTDLLRLDIGQNEFQQFPEVIGRFSKLKELWIDSNSFTIIPAVIKPLDNLIHLEA 229

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             N ++ +  EIG    L  L L+ N+ L  +P  +   SNL  + LDN  L  IP  I
Sbjct: 230 SNNMIEELAPEIGYCSRLEDLTLSVNS-LTQLPDTIGQLSNLTALKLDNNRLYSIPESI 287


>gi|12860109|dbj|BAB31849.1| unnamed protein product [Mus musculus]
          Length = 590

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 233/507 (45%), Gaps = 72/507 (14%)

Query: 59  VDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPP 118
           +D  KT+T +           +KKEP Q     ++ F          +D S   +  +P 
Sbjct: 31  IDTFKTLTKELLRQEHLPKVLQKKEPHQL---TDRTFF---------IDGSNQGLKTIPS 78

Query: 119 SVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL------------------- 159
            +  L  LEE++L  N++A +P  I  + N   L L  NSL                   
Sbjct: 79  EILALKELEEVHLENNQIAEIPQGIQQLQNTKVLYLHNNSLQDLCPELGALSSLESLDLS 138

Query: 160 ----------------------------TSLPDSLA-NLQQLRVLDLRHNKLNELPMVVY 190
                                       T +P  +  +L  L +  L  N L  LP  + 
Sbjct: 139 GNPLVISSLHVVSRLRTLRELRLYRTGLTEIPTGICKSLHHLELFGLSENFLESLPEEIV 198

Query: 191 KLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
             T L+ +YL+ N  +    D+  L NL ++ + +NK++ +P ++G L  L    +A NH
Sbjct: 199 NQTKLREIYLKQNHFEVFPCDLCVLYNLEVIDLDENKLKSIPGDIGHLVRLQKFYVASNH 258

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           L  LP+ +  C+ L  LDL HN + ++P  L  L  LT + LS NRLE VP  L   V L
Sbjct: 259 LMSLPESLSQCSKLSVLDLTHNSIHSLPSSLELLTELTEVGLSGNRLEKVPRLLCSWVSL 318

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN---FEHNQ 367
           +   +   +L  L D     L ++  + LS+N    +    P Q  ++ ++     + N+
Sbjct: 319 HLLYLRNTSLHGLRDS-FKRLINLRFLDLSQNHIEHF----PVQICALKNLEILALDDNK 373

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS---EDIQN 424
           + ++P  I S   NL  + +  N L S P ++ + + L +L +G +Q SKLS   E+I+ 
Sbjct: 374 VRQLPPSI-SLLSNLKILGLTGNDLLSFPEEIFSLISLEKLYIGQDQGSKLSSLPENIKR 432

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           L+NL+ L + NN L++LP+S+G +  L+ LD   N L+ LP+ I   + L+ L+L+ N L
Sbjct: 433 LMNLKELYIENNRLEQLPASLGLMPNLEVLDCRHNLLKQLPDAICRTRNLRELLLEDNLL 492

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIP 511
             LP  + HL NL  L++  N +   P
Sbjct: 493 CCLPENLDHLVNLKVLTLMNNPMVDPP 519



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 201/435 (46%), Gaps = 55/435 (12%)

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ- 213
           +   L ++P  +  L++L  + L +N++ E+P  + +L + K+LYL  N ++ + P++  
Sbjct: 69  SNQGLKTIPSEILALKELEEVHLENNQIAEIPQGIQQLQNTKVLYLHNNSLQDLCPELGA 128

Query: 214 --------------YLSNLSMLSMRD---------NKIRELPPELGE-LKNLVTLDLAHN 249
                          +S+L ++S              + E+P  + + L +L    L+ N
Sbjct: 129 LSSLESLDLSGNPLVISSLHVVSRLRTLRELRLYRTGLTEIPTGICKSLHHLELFGLSEN 188

Query: 250 HLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVH 309
            LE LP+EI N T L  + L+ N     P  L  L NL  + L  N+L+S+P  +   V 
Sbjct: 189 FLESLPEEIVNQTKLREIYLKQNHFEVFPCDLCVLYNLEVIDLDENKLKSIPGDIGHLVR 248

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
           L +F V    L SLP+ L                         +Q + +  ++  HN I 
Sbjct: 249 LQKFYVASNHLMSLPESL-------------------------SQCSKLSVLDLTHNSIH 283

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
            +P  +      L++V +  N L  +P  L +WV L  L L    +  L +  + L+NL 
Sbjct: 284 SLPSSL-ELLTELTEVGLSGNRLEKVPRLLCSWVSLHLLYLRNTSLHGLRDSFKRLINLR 342

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR 489
            L LS N ++  P  I  L+ L+ L L++NK+  LP  I  L  L+ L L  N L+S P 
Sbjct: 343 FLDLSQNHIEHFPVQICALKNLEILALDDNKVRQLPPSISLLSNLKILGLTGNDLLSFPE 402

Query: 490 AIGHLTNLSYLSVGENN---LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQI 546
            I  L +L  L +G++    L S+PE I  L NL  LY+ +N  L  +P  L L  NL++
Sbjct: 403 EIFSLISLEKLYIGQDQGSKLSSLPENIKRLMNLKELYIENNR-LEQLPASLGLMPNLEV 461

Query: 547 MSLDNCPLSQIPSEI 561
           +   +  L Q+P  I
Sbjct: 462 LDCRHNLLKQLPDAI 476



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 168/353 (47%), Gaps = 52/353 (14%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+  +DL ++ +  +P  +  L  L++ Y+  N L SLP  +   + L+ L L  N
Sbjct: 221 CVLYNLEVIDLDENKLKSIPGDIGHLVRLQKFYVASNHLMSLPESLSQCSKLSVLDLTHN 280

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           S+ SLP SL  L +L  + L  N+L ++P ++    SL +LYLR   +  +    + L N
Sbjct: 281 SIHSLPSSLELLTELTEVGLSGNRLEKVPRLLCSWVSLHLLYLRNTSLHGLRDSFKRLIN 340

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N I   P ++  LKNL  L L  N + +LP  I   + L  L L  N+L++ 
Sbjct: 341 LRFLDLSQNHIEHFPVQICALKNLEILALDDNKVRQLPPSISLLSNLKILGLTGNDLLSF 400

Query: 278 PDMLGNLINLTRLRLSYN---RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           P+ + +LI+L +L +  +   +L S+PE + + ++L E  +E   L  LP    +SL  +
Sbjct: 401 PEEIFSLISLEKLYIGQDQGSKLSSLPENIKRLMNLKELYIENNRLEQLP----ASLGLM 456

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            N+ +                     ++  HN + ++P  I  R +NL ++ ++DNLL  
Sbjct: 457 PNLEV---------------------LDCRHNLLKQLPDAI-CRTRNLRELLLEDNLLCC 494

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
           LP                       E++ +LVNL+VL L NN +   P  + N
Sbjct: 495 LP-----------------------ENLDHLVNLKVLTLMNNPMVDPPIYVCN 524


>gi|124486885|ref|NP_001074827.1| leucine-rich repeat-containing protein 7 [Mus musculus]
          Length = 1542

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 193/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 29  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSS 88

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 89  LPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 148

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 149 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 206

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 207 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 242

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 243 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 302

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 303 LSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 361

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 362 LEFLPEEIGQMQRLRVLNLSDNRLKNLP 389



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 197/416 (47%), Gaps = 27/416 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 22  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSI 81

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L+SLP S+A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 82  PDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 141

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 142 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 201

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+ +P ++ K   L   ++    + ++ D  +S   ++
Sbjct: 202 SELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETV-DMDISGCEAL 260

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                    D I  G+    K L+ + + DN LT 
Sbjct: 261 EDLLLSSNMLQQLP--------------------DSI--GLL---KKLTTLKVDDNQLTM 295

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    L E +   N++  L   I  L +L  L +  N L +LP  IG+ + +  +
Sbjct: 296 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 355

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
            L  NKLE LP EIG ++ L+ L L  N+L +LP +   L  L+ L + +N  +++
Sbjct: 356 SLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 411



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 181/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 98  NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 157

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 158 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLREL 217

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 218 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 277

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 278 GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLP----------------- 320

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                     PT       I + H               +L  + + +N L  LP ++G+
Sbjct: 321 ----------PT-------IGYLH---------------SLRTLAVDENFLPELPREIGS 348

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 349 CKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 408

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 409 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 438



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 72/133 (54%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + +  L +  + +T LP ++  L+ LEE     N+L SLP  IGY+ +L  L + EN L 
Sbjct: 281 KKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLP 340

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  + + + + V+ LR NKL  LP  + ++  L++L L  NR+K +      L  L+ 
Sbjct: 341 ELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAA 400

Query: 221 LSMRDNKIRELPP 233
           L + DN+ + L P
Sbjct: 401 LWLSDNQSKALIP 413


>gi|301780908|ref|XP_002925871.1| PREDICTED: leucine-rich repeat-containing protein 7-like
           [Ailuropoda melanoleuca]
          Length = 1545

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 193/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 32  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSN 91

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 92  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 151

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 152 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 209

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 210 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 245

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 246 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 305

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 306 LSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 364

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 365 LEFLPEEIGQMQKLRVLNLSDNRLKNLP 392



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 202/443 (45%), Gaps = 50/443 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q            
Sbjct: 25  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQ------------ 72

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q LR L +  N L+ LP  +  L +LK L +  N ++    +I+ 
Sbjct: 73  -----------LFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKC 121

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G    L  L+L+ N L
Sbjct: 122 CKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHL 181

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    +PE L +  +L E  ++  AL  LP G +  L  +
Sbjct: 182 KTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLP-GSIGKLKML 240

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N+              + +++ +            S  + L  + +  N+L  
Sbjct: 241 VYLDMSKNR--------------IETVDMD-----------ISGCEALEDLLLSSNMLQQ 275

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    LT L +  NQ++ L   I NL  LE    S N L+ LPS+IG L  L+ L
Sbjct: 276 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 335

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            ++EN L  LP EIG  K +  + L+SN+L  LP  IG +  L  L++ +N L+++P   
Sbjct: 336 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 395

Query: 515 GTLENLHTLYLNDNTCLNNIPFE 537
             L+ L  L+L+DN     IP +
Sbjct: 396 TKLKELAALWLSDNQSKALIPLQ 418



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 180/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 101 NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 160

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 161 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLREL 220

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 221 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 280

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 281 GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS---------------- 324

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                             +I + H               +L  + + +N L  LP ++G+
Sbjct: 325 ------------------TIGYLH---------------SLRTLAVDENFLPELPREIGS 351

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 352 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 411

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 412 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 441



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 183/402 (45%), Gaps = 61/402 (15%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + K+   C+   +  L +  + +++LP ++  L +L+EL +  N +   P  I     LT
Sbjct: 69  LPKQLFNCQA--LRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 126

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            +  + N ++ LPD    L  L  L L    L  LP    +L  L+IL LR N +KT+  
Sbjct: 127 IIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPK 186

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
            +  L+ L  L + +N+  ELP  L +++NL  L + +N L+ LP  IG   MLV LD  
Sbjct: 187 SMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD-- 244

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLL 328
                                +S NR+E+V   +S C  L +  +    L  LPD  GLL
Sbjct: 245 ---------------------MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLL 283

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
             LT                           ++  + NQ+  +P  I     NLS +   
Sbjct: 284 KKLT---------------------------TLKVDDNQLTMLPNTI----GNLSLLEEF 312

Query: 389 D---NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           D   N L SLP  +G    L  L +  N + +L  +I +  N+ V+ L +N L+ LP  I
Sbjct: 313 DCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 372

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           G ++KL+ L+L +N+L++LP     LKEL  L L  NQ  +L
Sbjct: 373 GQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 414


>gi|194211222|ref|XP_001498354.2| PREDICTED: leucine-rich repeat-containing protein 7 [Equus
           caballus]
          Length = 1537

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 194/388 (50%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 24  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSN 83

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 144 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 201

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP ++G    L  L++
Sbjct: 202 ------------------------VLDQIQNLRELWMDNNALQVLPGNIGKLKMLIYLDM 237

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 238 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGN 297

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 298 LSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 356

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 357 LEFLPEEIGQMQKLRVLNLSDNRLKNLP 384



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 202/443 (45%), Gaps = 50/443 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q            
Sbjct: 17  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q LR L +  N L+ LP  +  L +LK L +  N ++    +I+ 
Sbjct: 65  -----------LFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKC 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G    L  L+L+ N L
Sbjct: 114 CKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    +PE L +  +L E  ++  AL  LP G +  L  +
Sbjct: 174 KTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLP-GNIGKLKML 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N+              + +++ +            S  + L  + +  N+L  
Sbjct: 233 IYLDMSKNR--------------IETVDMD-----------ISGCEALEDLLLSSNMLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    LT L +  NQ++ L   I NL  LE    S N L+ LPS+IG L  L+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            ++EN L  LP EIG  K +  + L+SN+L  LP  IG +  L  L++ +N L+++P   
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFE 537
             L+ L  L+L+DN     IP +
Sbjct: 388 TKLKELAALWLSDNQSKALIPLQ 410



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 180/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 93  NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 152

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 153 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLREL 212

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK L+ LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 213 WMDNNALQVLPGNIGKLKMLIYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 272

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 273 GLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPS---------------- 316

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                             +I + H               +L  + + +N L  LP ++G+
Sbjct: 317 ------------------TIGYLH---------------SLRTLAVDENFLPELPREIGS 343

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 344 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 403

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 404 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 433


>gi|345801801|ref|XP_547339.3| PREDICTED: leucine-rich repeat-containing protein 7 [Canis lupus
           familiaris]
          Length = 1537

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 205/443 (46%), Gaps = 50/443 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 17  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSI 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L++LP ++A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 77  PDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 136

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 196

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+ +P                        G +  L  +
Sbjct: 197 SELPEVLDQIQNLRELWMDNNALQVLP------------------------GSIGKLKML 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N+              + +++ E            S  + L  + +  N+L  
Sbjct: 233 VYLDMSKNR--------------IETVDME-----------ISGCEALEDLLLSSNMLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    LT L +  NQ++ L   I NL  LE    S N L+ LPS+IG L  L+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            ++EN L  LP EIG  K +  + L+SN+L  LP  IG +  L  L++ +N L+++P   
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFE 537
             L+ L  L+L+DN     IP +
Sbjct: 388 TKLKELAALWLSDNQSKALIPLQ 410



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 193/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 24  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSN 83

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 144 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 201

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 202 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  +I     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 238 SKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGN 297

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 298 LSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 356

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 357 LEFLPEEIGQMQKLRVLNLSDNRLKNLP 384



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 175/368 (47%), Gaps = 51/368 (13%)

Query: 218 LSMLSMRDNKIRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           +S+L      ++++P E+    + L  L L  N +EELPK++ NC  L  L +  N+L N
Sbjct: 24  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSN 83

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  + +L+NL  L +S N ++  PE +  C  L         +S LPDG          
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF--------- 134

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
                           TQ  ++  +      ++ +P   F R   L  + +++N L +LP
Sbjct: 135 ----------------TQLLNLTQLYLNDAFLEFLPAN-FGRLVKLRILELRENHLKTLP 177

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +     L  L+LG N+ S+L E +  + NL  L + NN L+ LP SIG L+ L  LD+
Sbjct: 178 KSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 457 EENKLES-----------------------LPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
            +N++E+                       LP+ IG LK+L  L +  NQL  LP  IG+
Sbjct: 238 SKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGN 297

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L+ L       N L+S+P  IG L +L TL +++N  L  +P E+  C N+ +MSL +  
Sbjct: 298 LSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDEN-FLPELPREIGSCKNVTVMSLRSNK 356

Query: 554 LSQIPSEI 561
           L  +P EI
Sbjct: 357 LEFLPEEI 364



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 180/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 93  NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 152

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 153 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLREL 212

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  EI  C  L  L L  N L  +PD +
Sbjct: 213 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSI 272

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 273 GLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPS---------------- 316

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                             +I + H               +L  + + +N L  LP ++G+
Sbjct: 317 ------------------TIGYLH---------------SLRTLAVDENFLPELPREIGS 343

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 344 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 403

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 404 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 433


>gi|418702924|ref|ZP_13263816.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410767468|gb|EKR38143.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 358

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/314 (35%), Positives = 174/314 (55%), Gaps = 7/314 (2%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L + + K++ LP ++G+LKNL  LDL+ N L  LPKEI     L  L L +N+   
Sbjct: 28  DVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKT 87

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
            P  +  L +L +L LS N+L  +P  + +  +L E N+    L ++   +   L ++  
Sbjct: 88  FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEI-EQLKNLQK 146

Query: 337 ITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
           + L  N+ TA+P   G       +Y     +NQ+   P  I  + +NL ++ + +N LT+
Sbjct: 147 LYLDNNQLTAFPKEIGKLQNLQELY---LSNNQLTTFPKEI-GKLQNLQELYLSNNQLTT 202

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
            P ++G    L  L LG NQ++ +  +I  L  L+ L L  N L  +P  IG L+ L+ L
Sbjct: 203 FPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVL 262

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            L  N+ +++P E G LK L+ L L +NQL +LP+ IG L NL  L++  N L +IP+EI
Sbjct: 263 FLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLITIPKEI 322

Query: 515 GTLENLHTLYLNDN 528
           G L+NL TLYL +N
Sbjct: 323 GQLQNLQTLYLRNN 336



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/319 (35%), Positives = 171/319 (53%), Gaps = 27/319 (8%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            L L+   L+ LP++IG    L  LDL  N+L+ +P  +  L NL  L L+YN+ ++ P+
Sbjct: 31  VLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPK 90

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + +                        L S++ + LS N+ T  P     Q  ++  +N
Sbjct: 91  EIEQ------------------------LKSLHKLYLSNNQLTILPVE-IGQLQNLQELN 125

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQ+  I   I  + KNL K+ + +N LT+ P ++G    L EL L  NQ++   ++I
Sbjct: 126 LWNNQLKTISKEI-EQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTTFPKEI 184

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NL+ L LSNN L   P  IG L+KL+ L L +N+L ++PNEIG L++LQ L L  N
Sbjct: 185 GKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVN 244

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL ++P+ IG L NL  L +  N  ++IP E G L+NL  L L+ N  L  +P E+    
Sbjct: 245 QLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQ-LTALPKEIGKLK 303

Query: 543 NLQIMSLDNCPLSQIPSEI 561
           NL++++LD   L  IP EI
Sbjct: 304 NLKMLNLDANQLITIPKEI 322



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 180/337 (53%), Gaps = 26/337 (7%)

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
           ++  L L+E  L +LP+ +  L+ L++LDL  N+L  LP  + +L +L+ L+L +N+ KT
Sbjct: 28  DVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKT 87

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
              +I+ L +L  L + +N++  LP E+G+L+NL  L+L +N L+ + KEI     L  L
Sbjct: 88  FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKL 147

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
            L +N+L   P  +G L NL  L LS N+L + P+ + K  +L E  +    L++ P  +
Sbjct: 148 YLDNNQLTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI 207

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
              L  +  + L  N+ T  P                 N+I K+        + L ++N+
Sbjct: 208 -GKLQKLQWLGLGDNQLTTIP-----------------NEIGKL--------QKLQELNL 241

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
             N LT++P ++G    L  L L  NQ   +  +   L NL++L L  N L  LP  IG 
Sbjct: 242 DVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGK 301

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           L+ LK L+L+ N+L ++P EIG L+ LQ L L++NQ 
Sbjct: 302 LKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQF 338



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 165/311 (53%), Gaps = 3/311 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS+  +  LP  + +L +L+ L L  N+L  LP +I  + NL  L L  N   + P  
Sbjct: 32  LILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKE 91

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L  L L +N+L  LP+ + +L +L+ L L  N++KT+  +I+ L NL  L + +
Sbjct: 92  IEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDN 151

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++   P E+G+L+NL  L L++N L   PKEIG    L  L L +N+L   P  +G L 
Sbjct: 152 NQLTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQ 211

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L  N+L ++P  + K   L E N++   L+++P  +   L ++  + LS N+F 
Sbjct: 212 KLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEI-GQLQNLQVLFLSYNQFK 270

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++  ++ + NQ+  +P  I  + KNL  +N+  N L ++P ++G    L
Sbjct: 271 TIPVEF-GQLKNLKMLSLDANQLTALPKEI-GKLKNLKMLNLDANQLITIPKEIGQLQNL 328

Query: 406 TELNLGTNQIS 416
             L L  NQ S
Sbjct: 329 QTLYLRNNQFS 339



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 85/222 (38%), Positives = 122/222 (54%), Gaps = 7/222 (3%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           I KE  + K  N+  L L  + +T  P  + KL +L+ELYL  N+L + P +IG + NL 
Sbjct: 134 ISKEIEQLK--NLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQNLQ 191

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L+ N LT+ P  +  LQ+L+ L L  N+L  +P  + KL  L+ L L  N++ T+  
Sbjct: 192 ELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPK 251

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           +I  L NL +L +  N+ + +P E G+LKNL  L L  N L  LPKEIG    L  L+L 
Sbjct: 252 EIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLD 311

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRL-----ESVPETLSKC 307
            N+L+ IP  +G L NL  L L  N+      E + + L KC
Sbjct: 312 ANQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRKLLPKC 353



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 131/249 (52%), Gaps = 1/249 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L+ +     P  +E+L  L +LYL  N+L  LP +IG + NL  L L  N L 
Sbjct: 73  KNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLK 132

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++   +  L+ L+ L L +N+L   P  + KL +L+ LYL  N++ T   +I  L NL  
Sbjct: 133 TISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQNLQE 192

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++   P E+G+L+ L  L L  N L  +P EIG    L  L+L  N+L  IP  
Sbjct: 193 LYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKE 252

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LSYN+ +++P    +  +L   +++   L++LP   +  L ++  + L 
Sbjct: 253 IGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE-IGKLKNLKMLNLD 311

Query: 341 RNKFTAYPS 349
            N+    P 
Sbjct: 312 ANQLITIPK 320



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 82/144 (56%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L++  QN +++ VL+LS   LK LP  IG L+ L+ LDL +N+L  LP EI  LK LQ L
Sbjct: 19  LTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 78

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L  NQ  + P+ I  L +L  L +  N L  +P EIG L+NL  L L +N  L  I  E
Sbjct: 79  FLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQ-LKTISKE 137

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    NLQ + LDN  L+  P EI
Sbjct: 138 IEQLKNLQKLYLDNNQLTAFPKEI 161



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 71/123 (57%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  +  N   ++ L L E KL++LP +IG LK LQ L L  NQL+ LP+ I  L NL 
Sbjct: 17  RDLTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQ 76

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N  ++ P+EI  L++LH LYL++N  L  +P E+    NLQ ++L N  L  I 
Sbjct: 77  ELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQ-LTILPVEIGQLQNLQELNLWNNQLKTIS 135

Query: 559 SEI 561
            EI
Sbjct: 136 KEI 138


>gi|124010197|ref|ZP_01694853.1| small GTP-binding protein domain [Microscilla marina ATCC 23134]
 gi|123983741|gb|EAY24168.1| small GTP-binding protein domain [Microscilla marina ATCC 23134]
          Length = 515

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 135/435 (31%), Positives = 215/435 (49%), Gaps = 26/435 (5%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           +T+L P + +L +L +L +    L +LP   G + NL+ L +  +SL +LP S++ ++ L
Sbjct: 67  VTNLSPRISELKYLRDLIIKCKNLKTLPENFGEL-NLSFLRIKSDSLIALPKSISKIKNL 125

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
             L L  N L  LP  + KL  L+ L +R N ++ +   I  L  L  L ++ + +R LP
Sbjct: 126 SYLVLNVNSLTRLPKGIGKLQKLQRLEIRSNNLRVLPKSIGKLQKLDTLRLQAHGLRALP 185

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             +G+L+NL  L L  + L++LPK IG    L  L LQ N L  +P  L  L  L ++ L
Sbjct: 186 KSIGKLQNLKKLILRADALKKLPKSIGRLPNLEQLVLQANRLTTLPKNLSQLPKLKKMTL 245

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--G 350
               L ++P+++     L    +E  +L +L  G+      +  + +   +F   P   G
Sbjct: 246 IVRSLHTLPKSIGNFPELEMLELEVNSLVALTPGI-GQFKRLKYLKIVNGRFATLPQSIG 304

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                  ++ +N     +  +P GI    K L ++ +  + LT+LP  +G    L EL  
Sbjct: 305 DLQNLEMLFLLNVP---LTTLPEGI-GNLKKLRRLQILKSKLTTLPEAIGNLKNLRELLF 360

Query: 411 ----------------GTN-QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
                           G N Q++ L E I  L NL +L LS+N L +LP SIGNL+ L+ 
Sbjct: 361 RYRYKPSGESLRYREGGRNGQLATLPESIGKLQNLVLLNLSHNQLTQLPKSIGNLQNLEY 420

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           +DL  N+L + P+    L  L  L    NQL SLP++IG L  L YL +  N L+++PE 
Sbjct: 421 MDLSYNRLITFPDSFSKLSRLGSLYSNHNQLTSLPKSIGALKGLMYLQLRYNQLKALPES 480

Query: 514 IGTLENLHTLYLNDN 528
              L+ L  L++  N
Sbjct: 481 FYKLD-LMNLFIAHN 494



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 133/412 (32%), Positives = 201/412 (48%), Gaps = 14/412 (3%)

Query: 88  DLNIEKEFLRCKEENILNLDLS-----KSSITHLPPSVEKLTHLEELYLYGNKLASLPSQ 142
           DL I+ + L+   EN   L+LS       S+  LP S+ K+ +L  L L  N L  LP  
Sbjct: 82  DLIIKCKNLKTLPENFGELNLSFLRIKSDSLIALPKSISKIKNLSYLVLNVNSLTRLPKG 141

Query: 143 IGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           IG +  L  L +  N+L  LP S+  LQ+L  L L+ + L  LP  + KL +LK L LR 
Sbjct: 142 IGKLQKLQRLEIRSNNLRVLPKSIGKLQKLDTLRLQAHGLRALPKSIGKLQNLKKLILRA 201

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           + +K +   I  L NL  L ++ N++  LP  L +L  L  + L    L  LPK IGN  
Sbjct: 202 DALKKLPKSIGRLPNLEQLVLQANRLTTLPKNLSQLPKLKKMTLIVRSLHTLPKSIGNFP 261

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  L+L+ N LV +   +G    L  L++   R  ++P+++    +L    +    L++
Sbjct: 262 ELEMLELEVNSLVALTPGIGQFKRLKYLKIVNGRFATLPQSIGDLQNLEMLFLLNVPLTT 321

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LP+G + +L  +  + + ++K T  P        ++  + F +      P G   R +  
Sbjct: 322 LPEG-IGNLKKLRRLQILKSKLTTLPE-AIGNLKNLRELLFRYRY---KPSGESLRYRE- 375

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
                ++  L +LP  +G    L  LNL  NQ+++L + I NL NLE + LS N L   P
Sbjct: 376 ---GGRNGQLATLPESIGKLQNLVLLNLSHNQLTQLPKSIGNLQNLEYMDLSYNRLITFP 432

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
            S   L +L  L    N+L SLP  IG LK L  L L+ NQL +LP +   L
Sbjct: 433 DSFSKLSRLGSLYSNHNQLTSLPKSIGALKGLMYLQLRYNQLKALPESFYKL 484



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 169/383 (44%), Gaps = 43/383 (11%)

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           +K + L  + +  + P I  L  L  L ++   ++ LP   GEL NL  L +  + L  L
Sbjct: 57  IKAMVLYGDNVTNLSPRISELKYLRDLIIKCKNLKTLPENFGEL-NLSFLRIKSDSLIAL 115

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           PK I     L  L L  N L  +P  +G L  L RL +  N L  +P+++ K   L+   
Sbjct: 116 PKSISKIKNLSYLVLNVNSLTRLPKGIGKLQKLQRLEIRSNNLRVLPKSIGKLQKLDTLR 175

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           ++   L +LP     S+  + N+                       +    + + K+P  
Sbjct: 176 LQAHGLRALPK----SIGKLQNLK---------------------KLILRADALKKLPKS 210

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           I  R  NL ++ ++ N LT+LP +L     L ++ L    +  L + I N   LE+L L 
Sbjct: 211 I-GRLPNLEQLVLQANRLTTLPKNLSQLPKLKKMTLIVRSLHTLPKSIGNFPELEMLELE 269

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
            N L  L   IG  ++LK L +   +  +LP  IG L+ L+ L L +  L +LP  IG+L
Sbjct: 270 VNSLVALTPGIGQFKRLKYLKIVNGRFATLPQSIGDLQNLEMLFLLNVPLTTLPEGIGNL 329

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYL----------------NDNTCLNNIPFEL 538
             L  L + ++ L ++PE IG L+NL  L                    N  L  +P  +
Sbjct: 330 KKLRRLQILKSKLTTLPEAIGNLKNLRELLFRYRYKPSGESLRYREGGRNGQLATLPESI 389

Query: 539 ALCSNLQIMSLDNCPLSQIPSEI 561
               NL +++L +  L+Q+P  I
Sbjct: 390 GKLQNLVLLNLSHNQLTQLPKSI 412


>gi|392338593|ref|XP_003753576.1| PREDICTED: protein LAP2-like [Rattus norvegicus]
 gi|392345308|ref|XP_003749226.1| PREDICTED: protein LAP2-like [Rattus norvegicus]
          Length = 1430

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 199/400 (49%), Gaps = 11/400 (2%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE +  LD S  S+  +P  +      LEELYL  N++  LP Q+    +L  L L
Sbjct: 17  LRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSL 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT+LP S+ANL  LR LD+  N + E P  +     L ++    N I  +      
Sbjct: 77  PDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ 136

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE--IGNCTMLVTLDLQHN 272
           L NL+ L + D  +  LP   G L  L  L+L  N L+ LPK   +   + L    +  N
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKPEVLEQLSGLREFWMDGN 196

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
            L  IP  +G+L  LT L +S N +E V E +S C +L +F +   +L  LP+  + SL 
Sbjct: 197 RLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPE-TIGSLK 255

Query: 333 SINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           ++  + +  N+    P   GG     S+  ++   N+I+ +P  I  +  N+       N
Sbjct: 256 NVTTLKIDENQLMYLPDSIGG---LRSIEELDCSFNEIEALPSSI-GQLTNIRTFAADHN 311

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L  LP ++G W  +T L L +N++  L E++ ++  L+V+ LS+N LK LP S   L++
Sbjct: 312 YLQQLPPEIGNWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQ 371

Query: 451 LKCLDLEENKLESL-PNEIGFLKELQRLILQSNQLVSLPR 489
           L  + L +N+ + L P +     E Q+++L +      PR
Sbjct: 372 LTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPR 411



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 190/389 (48%), Gaps = 8/389 (2%)

Query: 174 VLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            LD  H  L ++P  ++    +L+ LYL  N+I+ +   +    +L  LS+ DN +  LP
Sbjct: 26  TLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLP 85

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             +  L NL  LD++ N ++E P+ I NC +L  ++   N +  +PD    L+NLT+L L
Sbjct: 86  ASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYL 145

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG-LLSSLTSINNITLSRNKFTAYPS-- 349
           +   LE +P    +   L    +    L  LP   +L  L+ +    +  N+ T  P   
Sbjct: 146 NDAFLEFLPANFGRLTKLQILELRENQLKMLPKPEVLEQLSGLREFWMDGNRLTFIPGFI 205

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
           G   Q T    ++   N I+ +  GI S  +NL    +  N L  LP  +G+   +T L 
Sbjct: 206 GSLRQLTY---LDVSKNNIEMVEEGI-STCENLQDFLLSSNSLQQLPETIGSLKNVTTLK 261

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           +  NQ+  L + I  L ++E L  S N ++ LPSSIG L  ++    + N L+ LP EIG
Sbjct: 262 IDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIG 321

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
             K +  L L SN+L +LP  +G +  L  +++ +N L+++P     L+ L  ++L+DN 
Sbjct: 322 NWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQ 381

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIP 558
               IP +    S  Q M L N    Q P
Sbjct: 382 SKPLIPLQKETDSETQKMVLTNYMFPQQP 410



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 117/216 (54%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           F R  +  IL L  ++  +   P  +E+L+ L E ++ GN+L  +P  IG +  LT L +
Sbjct: 157 FGRLTKLQILELRENQLKMLPKPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDV 216

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           ++N++  + + ++  + L+   L  N L +LP  +  L ++  L +  N++  +   I  
Sbjct: 217 SKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGG 276

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L ++  L    N+I  LP  +G+L N+ T    HN+L++LP EIGN   +  L L  N+L
Sbjct: 277 LRSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKL 336

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
             +P+ +G++  L  + LS NRL+++P + +K   L
Sbjct: 337 ETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQL 372



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 121/268 (45%), Gaps = 31/268 (11%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L +L +LYL    L  LP+
Sbjct: 96  ELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPA 155

Query: 142 QIGYVTNLTCLGLAENSLTSLP--DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILY 199
             G +T L  L L EN L  LP  + L  L  LR   +  N+L  +P  +  L  L  L 
Sbjct: 156 NFGRLTKLQILELRENQLKMLPKPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLD 215

Query: 200 LRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTL--------------- 244
           +  N I+ V   I    NL    +  N +++LP  +G LKN+ TL               
Sbjct: 216 VSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIG 275

Query: 245 --------DLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNR 296
                   D + N +E LP  IG  T + T    HN L  +P  +GN  N+T L L  N+
Sbjct: 276 GLRSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNK 335

Query: 297 LESVPETLSKCVHLNEFNVEGCALSSLP 324
           LE++PE +     L   N+    L +LP
Sbjct: 336 LETLPEEMGDMQKLKVINLSDNRLKNLP 363



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 104/198 (52%), Gaps = 4/198 (2%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           NQI+++P  +F+  ++L K+++ DN LT+LP  +   + L EL++  N I +  E+I+N 
Sbjct: 56  NQIEELPKQLFN-CQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNC 114

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
             L V+  S N + KLP     L  L  L L +  LE LP   G L +LQ L L+ NQL 
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLK 174

Query: 486 SLPR--AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
            LP+   +  L+ L    +  N L  IP  IG+L  L  L ++ N  +  +   ++ C N
Sbjct: 175 MLPKPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNN-IEMVEEGISTCEN 233

Query: 544 LQIMSLDNCPLSQIPSEI 561
           LQ   L +  L Q+P  I
Sbjct: 234 LQDFLLSSNSLQQLPETI 251


>gi|410967519|ref|XP_003990266.1| PREDICTED: leucine-rich repeat-containing protein 7 [Felis catus]
          Length = 1537

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 205/443 (46%), Gaps = 50/443 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 17  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSI 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L++LP ++A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 77  PDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 136

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 196

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+ +P                        G +  L  +
Sbjct: 197 SELPEVLDQIQNLRELWMDNNALQVLP------------------------GSIGKLKML 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N+              + +++ E            S  + L  + +  N+L  
Sbjct: 233 VYLDMSKNR--------------IETVDME-----------ISGCEALEDLLLSSNMLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    LT L +  NQ++ L   I NL  LE    S N L+ LPS+IG L  L+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            ++EN L  LP EIG  K +  + L+SN+L  LP  IG +  L  L++ +N L+++P   
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFE 537
             L+ L  L+L+DN     IP +
Sbjct: 388 TKLKELAALWLSDNQSKALIPLQ 410



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 193/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 24  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSN 83

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 144 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 201

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 202 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  +I     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 238 SKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGN 297

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 298 LSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 356

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 357 LEFLPEEIGQMQKLRVLNLSDNRLKNLP 384



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 175/368 (47%), Gaps = 51/368 (13%)

Query: 218 LSMLSMRDNKIRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           +S+L      ++++P E+    + L  L L  N +EELPK++ NC  L  L +  N+L N
Sbjct: 24  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSN 83

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  + +L+NL  L +S N ++  PE +  C  L         +S LPDG          
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF--------- 134

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
                           TQ  ++  +      ++ +P   F R   L  + +++N L +LP
Sbjct: 135 ----------------TQLLNLTQLYLNDAFLEFLPAN-FGRLVKLRILELRENHLKTLP 177

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +     L  L+LG N+ S+L E +  + NL  L + NN L+ LP SIG L+ L  LD+
Sbjct: 178 KSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 457 EENKLES-----------------------LPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
            +N++E+                       LP+ IG LK+L  L +  NQL  LP  IG+
Sbjct: 238 SKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGN 297

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L+ L       N L+S+P  IG L +L TL +++N  L  +P E+  C N+ +MSL +  
Sbjct: 298 LSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDEN-FLPELPREIGSCKNVTVMSLRSNK 356

Query: 554 LSQIPSEI 561
           L  +P EI
Sbjct: 357 LEFLPEEI 364



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 180/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 93  NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 152

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 153 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLREL 212

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  EI  C  L  L L  N L  +PD +
Sbjct: 213 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSI 272

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 273 GLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPS---------------- 316

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                             +I + H               +L  + + +N L  LP ++G+
Sbjct: 317 ------------------TIGYLH---------------SLRTLAVDENFLPELPREIGS 343

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 344 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 403

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 404 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 433


>gi|424842302|ref|ZP_18266927.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395320500|gb|EJF53421.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 600

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 225/444 (50%), Gaps = 22/444 (4%)

Query: 89  LNIEKEFLRCKEENILNL------DLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQ 142
           LN+E  +L+   + + +L       LS + + +LP  ++ L +L  LY+ GN+L  LP+ 
Sbjct: 100 LNLENNYLKELPDGLFDLPYLEELRLSNNQLQYLPEKIKGLRNLRRLYIDGNELRMLPNN 159

Query: 143 IGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           +  +  L  +    N L S+P++L  L++LR L L  N+L  LP  +   ++L++L +  
Sbjct: 160 LAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLLLDKNQLQYLPETLSGASALEVLAVDD 219

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           NR+K +   + YL  L+ L    N+++ELPP++G  +NL+ L + HN L+ LP+ IG   
Sbjct: 220 NRLKKLPEALVYLKKLTFLFAAHNQLQELPPQIGSSRNLLKLCVEHNQLQRLPESIGQLQ 279

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  L L+HN+L  +P   G L  L +L L  N+L  +P    +   L    +    L+S
Sbjct: 280 KLELLRLEHNQLKQLPKNFGQLKALRKLYLDSNQLTVLPINFGELTALENLYLNDNQLTS 339

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
           LP G + +   +  + L+ N  T+ P   G   Q   +Y      NQI  +P   F   K
Sbjct: 340 LPSG-IGNCKELRELFLNNNAMTSLPDSMGSLYQLEELY---MNDNQIANLPSS-FGGLK 394

Query: 381 NLSKVNMKDNLLTSLP--LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
           NL  + + +N +  L   LD   W  L+ + L  N   KL + ++    L+ L L  NL+
Sbjct: 395 NLKLLYLTNNKINRLSKDLDCSGWKRLSAIYLENNAFQKLPKALETAPQLQTLYLDGNLI 454

Query: 439 KKL-PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
            ++  S+I  + K++ + L +N+L  LP+ +G    ++ L L+ N ++ LP +I +  NL
Sbjct: 455 SEVNDSTIIKMPKIEHISLNDNQLSELPDNMGSWP-IRHLALERNGIMDLPESIRYFKNL 513

Query: 498 SYLSVGEN-----NLQSIPEEIGT 516
             L +  N      L+ I E I +
Sbjct: 514 ELLDLAGNKITQKRLKKIQENIAS 537



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 230/471 (48%), Gaps = 40/471 (8%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+L  + +  LP  +  L +LEEL L  N+L  LP +I  + NL  L +  N L  LP++
Sbjct: 100 LNLENNYLKELPDGLFDLPYLEELRLSNNQLQYLPEKIKGLRNLRRLYIDGNELRMLPNN 159

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           LA +++L  +   +N+L  +P  + KL  L+ L L  N+++ +   +   S L +L++ D
Sbjct: 160 LAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLLLDKNQLQYLPETLSGASALEVLAVDD 219

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++++LP  L  LK L  L  AHN L+ELP +IG+   L+ L ++HN+L           
Sbjct: 220 NRLKKLPEALVYLKKLTFLFAAHNQLQELPPQIGSSRNLLKLCVEHNQL----------- 268

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
                       + +PE++ +   L    +E   L  LP      L ++  + L  N+ T
Sbjct: 269 ------------QRLPESIGQLQKLELLRLEHNQLKQLPKN-FGQLKALRKLYLDSNQLT 315

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     + T++ ++    NQ+  +P GI    K L ++ + +N +TSLP  +G+   L
Sbjct: 316 VLPINF-GELTALENLYLNDNQLTSLPSGI-GNCKELRELFLNNNAMTSLPDSMGSLYQL 373

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI--GNLRKLKCLDLEENKLES 463
            EL +  NQI+ L      L NL++L L+NN + +L   +     ++L  + LE N  + 
Sbjct: 374 EELYMNDNQIANLPSSFGGLKNLKLLYLTNNKINRLSKDLDCSGWKRLSAIYLENNAFQK 433

Query: 464 LPNEIGFLKELQRLILQSNQLVSL-PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
           LP  +    +LQ L L  N +  +    I  +  + ++S+ +N L  +P+ +G+    H 
Sbjct: 434 LPKALETAPQLQTLYLDGNLISEVNDSTIIKMPKIEHISLNDNQLSELPDNMGSWPIRH- 492

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ---------IPSEIVVG 564
           L L  N  + ++P  +    NL+++ L    ++Q         I SE V+ 
Sbjct: 493 LALERNGIM-DLPESIRYFKNLELLDLAGNKITQKRLKKIQENIASEFVMA 542



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 185/354 (52%), Gaps = 18/354 (5%)

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           LSN S++S+ D+        + E ++L  L+L +N+L+ELP  + +   L  L L +N+L
Sbjct: 79  LSNDSLVSLGDS--------IREFRHLFFLNLENNYLKELPDGLFDLPYLEELRLSNNQL 130

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+ +  L NL RL +  N L  +P  L++   L     E   L S+P+ L   L  +
Sbjct: 131 QYLPEKIKGLRNLRRLYIDGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETL-GKLKRL 189

Query: 335 NNITLSRNKFTAYP---SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
            ++ L +N+    P   SG     +++  +  + N++ K+P  +    K L+ +    N 
Sbjct: 190 RSLLLDKNQLQYLPETLSGA----SALEVLAVDDNRLKKLPEALVY-LKKLTFLFAAHNQ 244

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           L  LP  +G+   L +L +  NQ+ +L E I  L  LE+L L +N LK+LP + G L+ L
Sbjct: 245 LQELPPQIGSSRNLLKLCVEHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKNFGQLKAL 304

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           + L L+ N+L  LP   G L  L+ L L  NQL SLP  IG+   L  L +  N + S+P
Sbjct: 305 RKLYLDSNQLTVLPINFGELTALENLYLNDNQLTSLPSGIGNCKELRELFLNNNAMTSLP 364

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGG 565
           + +G+L  L  LY+NDN  + N+P       NL+++ L N  ++++  ++   G
Sbjct: 365 DSMGSLYQLEELYMNDNQ-IANLPSSFGGLKNLKLLYLTNNKINRLSKDLDCSG 417


>gi|119626868|gb|EAX06463.1| leucine rich repeat containing 7, isoform CRA_c [Homo sapiens]
          Length = 1574

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 192/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 61  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSN 120

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 121 LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 180

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F   P  
Sbjct: 181 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFGELPE- 238

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 239 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 274

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 275 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 334

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 335 LSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 393

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 394 LEFLPEEIGQMQKLRVLNLSDNRLKNLP 421



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 202/443 (45%), Gaps = 50/443 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q            
Sbjct: 54  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQ------------ 101

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q LR L +  N L+ LP  +  L +LK L +  N ++    +I+ 
Sbjct: 102 -----------LFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKC 150

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G    L  L+L+ N L
Sbjct: 151 CKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHL 210

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    +PE L +  +L E  ++  AL  LP G +  L  +
Sbjct: 211 KTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLP-GSIGKLKML 269

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N+              + +++ +            S  + L  + +  N+L  
Sbjct: 270 VYLDMSKNR--------------IETVDMD-----------ISGCEALEDLLLSSNMLQQ 304

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    LT L +  NQ++ L   I NL  LE    S N L+ LPS+IG L  L+ L
Sbjct: 305 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 364

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            ++EN L  LP EIG  K +  + L+SN+L  LP  IG +  L  L++ +N L+++P   
Sbjct: 365 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 424

Query: 515 GTLENLHTLYLNDNTCLNNIPFE 537
             L+ L  L+L+DN     IP +
Sbjct: 425 TKLKELAALWLSDNQSKALIPLQ 447



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 180/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 130 NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 189

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 190 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLREL 249

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 250 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 309

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 310 GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS---------------- 353

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                             +I + H               +L  + + +N L  LP ++G+
Sbjct: 354 ------------------TIGYLH---------------SLRTLAVDENFLPELPREIGS 380

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 381 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 440

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 441 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 470



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 183/402 (45%), Gaps = 61/402 (15%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + K+   C  + +  L +  + +++LP ++  L +L+EL +  N +   P  I     LT
Sbjct: 98  LPKQLFNC--QALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 155

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            +  + N ++ LPD    L  L  L L    L  LP    +L  L+IL LR N +KT+  
Sbjct: 156 IIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPK 215

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
            +  L+ L  L + +N+  ELP  L +++NL  L + +N L+ LP  IG   MLV LD  
Sbjct: 216 SMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD-- 273

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLL 328
                                +S NR+E+V   +S C  L +  +    L  LPD  GLL
Sbjct: 274 ---------------------MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLL 312

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
             LT                           ++  + NQ+  +P  I     NLS +   
Sbjct: 313 KKLT---------------------------TLKVDDNQLTMLPNTI----GNLSLLEEF 341

Query: 389 D---NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           D   N L SLP  +G    L  L +  N + +L  +I +  N+ V+ L +N L+ LP  I
Sbjct: 342 DCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 401

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           G ++KL+ L+L +N+L++LP     LKEL  L L  NQ  +L
Sbjct: 402 GQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 443


>gi|410959449|ref|XP_003986321.1| PREDICTED: leucine-rich repeat-containing protein 1 [Felis catus]
          Length = 544

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 192/382 (50%), Gaps = 28/382 (7%)

Query: 178 RHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELG 236
           RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I+ LPPE+ 
Sbjct: 40  RHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIA 99

Query: 237 ELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNR 296
               LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT L ++   
Sbjct: 100 NFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDIS 159

Query: 297 LESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFT 356
           L+S+PE +    +L    +    L+ LPD L                         TQ  
Sbjct: 160 LQSLPENIGNLYNLASLELRENLLTYLPDSL-------------------------TQLR 194

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS 416
            +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L++  N++ 
Sbjct: 195 RLEELDLGNNEIYNLPESIGALL-HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLE 253

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
           +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L +++N+L  LP  +G  + L  
Sbjct: 254 RLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTE 313

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
           L+L  N+L++LP++IG L  LS L+   N L S+P+EIG   +L    + DN  L  IP 
Sbjct: 314 LVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNR-LTRIPA 372

Query: 537 ELALCSNLQIMSLDNCPLSQIP 558
           E++  + L ++ +    L  +P
Sbjct: 373 EVSQATELHVLDVAGNRLLHLP 394



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 132/418 (31%), Positives = 198/418 (47%), Gaps = 51/418 (12%)

Query: 112 SITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
           S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LGL++N +  LP  +AN  
Sbjct: 43  SLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFM 102

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           QL  LD+  N + E+P  +    +L+I     N +  +      L NL+ LS+ D  ++ 
Sbjct: 103 QLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQS 162

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +G L NL +L+L  N L  LP  +     L  LDL +NE+ N+P+ +G L++L  L
Sbjct: 163 LPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDL 222

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L  N+L  +P+ +    +L   +V    L  LP+ + S LTS+ ++ +S          
Sbjct: 223 WLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI-SGLTSLTDLVIS---------- 271

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                          N ++ IP GI  + K LS + +  N LT LP  +G    LTEL  
Sbjct: 272 --------------QNLLEMIPDGI-GKLKKLSILKVDQNRLTQLPEAVGDCESLTEL-- 314

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
                                VL+ N L  LP SIG L+KL  L+ + NKL SLP EIG 
Sbjct: 315 ---------------------VLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGG 353

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
              L    ++ N+L  +P  +   T L  L V  N L  +P  +  L+ L  L+L+DN
Sbjct: 354 CCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTALK-LKALWLSDN 410



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 112/314 (35%), Positives = 165/314 (52%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 104 LVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 163

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 164 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 223

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 224 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIG 283

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE +  C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 284 KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKS-IGKLKKLSNLNADRN 342

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 343 KLVSLPKEIGGCCSLT-VFCV--RDNRLTRIPAEV-SQATELHVLDVAGNRLLHLPLSL- 397

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 398 TALKLKALWLSDNQ 411



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 167/349 (47%), Gaps = 56/349 (16%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L ELP++      L  L L  NE+  +P  + N + L  L +S N + 
Sbjct: 56  RSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIP 115

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQ 354
            +PE++S C  L   +  G  L+ LP+    L +LT  S+N+I+L            P  
Sbjct: 116 EIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQ---------SLPEN 166

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
             ++Y                     NL+ + +++NLLT LP  L     L EL+LG N+
Sbjct: 167 IGNLY---------------------NLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 205

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           I  L E I  L++L+ L L  N L +LP  IGNL+ L CLD+ EN+LE LP EI  L  L
Sbjct: 206 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 265

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN-- 532
             L++  N L  +P  IG L  LS L V +N L  +PE +G  E+L  L L +N  L   
Sbjct: 266 TDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLP 325

Query: 533 --------------------NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                               ++P E+  C +L +  + +  L++IP+E+
Sbjct: 326 KSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEV 374



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 165/359 (45%), Gaps = 27/359 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + I  LPP +     L EL +  N +  +P  I +   L     + N LT LP+S
Sbjct: 84  LGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPES 143

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
              LQ L  L +    L  LP  +  L +L  L LR N +  +   +  L  L  L + +
Sbjct: 144 FPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGN 203

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I  LP  +G L +L  L L  N L ELP+EIGN   L+ LD+  N L  +P+ +  L 
Sbjct: 204 NEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLT 263

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +LT L +S N LE +P+ + K   L+   V+   L+ LP+  +    S+  + L+ N+  
Sbjct: 264 SLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEA-VGDCESLTELVLTENRLL 322

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                             + K LS +N   N L SLP ++G    L
Sbjct: 323 TLPKS-------------------------IGKLKKLSNLNADRNKLVSLPKEIGGCCSL 357

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           T   +  N+++++  ++     L VL ++ N L  LP S+  L KLK L L +N+ + L
Sbjct: 358 TVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDNQSQPL 415



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 124/223 (55%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +L+L ++ +T+LP S+ +L  LEEL L  N++ +LP  IG + +L  L L  N L+ 
Sbjct: 172 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 231

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + NL+ L  LD+  N+L  LP  +  LTSL  L +  N ++ +   I  L  LS+L
Sbjct: 232 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSIL 291

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++ +LP  +G+ ++L  L L  N L  LPK IG    L  L+   N+LV++P  +
Sbjct: 292 KVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 351

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
           G   +LT   +  NRL  +P  +S+   L+  +V G  L  LP
Sbjct: 352 GGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLP 394



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +L +S++ +  +P  + KL  L  L +  N+L  LP  +G   +LT L L EN L +LP 
Sbjct: 267 DLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPK 326

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
           S+  L++L  L+   NKL  LP  +    SL +  +R NR+  +  ++   + L +L + 
Sbjct: 327 SIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVA 386

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEEL 254
            N++  LP  L  LK L  L L+ N  + L
Sbjct: 387 GNRLLHLPLSLTALK-LKALWLSDNQSQPL 415



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 1/104 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E++  L L+++ +  LP S+ KL  L  L    NKL SLP +IG   +LT   + +N LT
Sbjct: 309 ESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLT 368

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR 204
            +P  ++   +L VLD+  N+L  LP+ +  L  LK L+L  N+
Sbjct: 369 RIPAEVSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDNQ 411


>gi|395530455|ref|XP_003767310.1| PREDICTED: leucine-rich repeat-containing protein 7 [Sarcophilus
           harrisii]
          Length = 1442

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 193/386 (50%), Gaps = 28/386 (7%)

Query: 174 VLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
           VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  LP
Sbjct: 33  VLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLP 92

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    LINLT+L L
Sbjct: 93  TTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLINLTQLYL 152

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           +   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P    
Sbjct: 153 NDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE--- 208

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
                                 +  + +NL ++ M +N L +LP  +G    L  L++  
Sbjct: 209 ----------------------VLEQIQNLRELWMDNNALQTLPGSIGKLKMLVYLDMSK 246

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N+I  +  +I     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG L 
Sbjct: 247 NRIETVDLEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTVLPNAIGNLS 306

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  L 
Sbjct: 307 LLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK-LE 365

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIP 558
            +P E+     L++++L +  L  +P
Sbjct: 366 FLPEEIGQMQKLRVLNLSDNRLKNLP 391



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 202/443 (45%), Gaps = 50/443 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE +  LD S   +  +P  V      LEELYL  N++  LP Q            
Sbjct: 24  FRGEEEIVAVLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQ------------ 71

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q LR L +  N L+ LP  +  L +LK L +  N ++    +I+ 
Sbjct: 72  -----------LFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKC 120

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G    L  L+L+ N L
Sbjct: 121 CKCLTIIEASVNPISKLPDGFTQLINLTQLYLNDAFLEFLPANFGRLVKLRILELRENHL 180

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    +PE L +  +L E  ++  AL +LP G +  L  +
Sbjct: 181 KTLPKSMHKLAQLERLDLGNNEFSELPEVLEQIQNLRELWMDNNALQTLP-GSIGKLKML 239

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N+              + +++ E            S  + L  + +  N+L  
Sbjct: 240 VYLDMSKNR--------------IETVDLE-----------ISGCEALEDLLLSSNMLQQ 274

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    LT L +  NQ++ L   I NL  LE    S N L+ LPS+IG L  L+ L
Sbjct: 275 LPDSIGLLKKLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 334

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            ++EN L  LP EIG  K +  + L+SN+L  LP  IG +  L  L++ +N L+++P   
Sbjct: 335 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 394

Query: 515 GTLENLHTLYLNDNTCLNNIPFE 537
             L+ L  L+L+DN     IP +
Sbjct: 395 TKLKELAALWLSDNQSKALIPLQ 417



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 173/358 (48%), Gaps = 51/358 (14%)

Query: 228 IRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           ++++P E+    + L  L L  N +EELPK++ NC  L  L +  N+L N+P  + +L+N
Sbjct: 41  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVN 100

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N ++  PE +  C  L         +S LPDG                    
Sbjct: 101 LKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF------------------- 141

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
                 TQ  ++  +      ++ +P   F R   L  + +++N L +LP  +     L 
Sbjct: 142 ------TQLINLTQLYLNDAFLEFLPAN-FGRLVKLRILELRENHLKTLPKSMHKLAQLE 194

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES--- 463
            L+LG N+ S+L E ++ + NL  L + NN L+ LP SIG L+ L  LD+ +N++E+   
Sbjct: 195 RLDLGNNEFSELPEVLEQIQNLRELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVDL 254

Query: 464 --------------------LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
                               LP+ IG LK+L  L +  NQL  LP AIG+L+ L      
Sbjct: 255 EISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTVLPNAIGNLSLLEEFDCS 314

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N L+S+P  IG L +L TL +++N  L  +P E+  C N+ +MSL +  L  +P EI
Sbjct: 315 CNELESLPSTIGYLHSLRTLAVDEN-FLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 371



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 180/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 100 NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLINLTQLYLNDAFLEF 159

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   ++ + NL  L
Sbjct: 160 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLEQIQNLREL 219

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  EI  C  L  L L  N L  +PD +
Sbjct: 220 WMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVDLEISGCEALEDLLLSSNMLQQLPDSI 279

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P  +     L EF+     L SLP                 
Sbjct: 280 GLLKKLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPS---------------- 323

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                             +I + H               +L  + + +N L  LP ++G+
Sbjct: 324 ------------------TIGYLH---------------SLRTLAVDENFLPELPREIGS 350

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 351 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 410

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 411 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 440


>gi|296208239|ref|XP_002807054.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 7-like [Callithrix jacchus]
          Length = 1574

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 193/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 61  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSN 120

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 121 LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 180

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 181 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 238

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 239 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 274

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 275 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGN 334

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 335 LSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 393

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 394 LEFLPEEIGQMQKLRVLNLSDNRLKNLP 421



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 202/443 (45%), Gaps = 50/443 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q            
Sbjct: 54  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQ------------ 101

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q LR L +  N L+ LP  +  L +LK L +  N ++    +I+ 
Sbjct: 102 -----------LFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKC 150

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G    L  L+L+ N L
Sbjct: 151 CKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHL 210

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    +PE L +  +L E  ++  AL  LP G +  L  +
Sbjct: 211 KTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLP-GSIGKLKML 269

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N+              + +++ +            S  + L  + +  N+L  
Sbjct: 270 VYLDMSKNR--------------IETVDMD-----------ISGCEALEDLLLSSNMLQQ 304

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    LT L +  NQ++ L   I NL  LE    S N L+ LPS+IG L  L+ L
Sbjct: 305 LPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 364

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            ++EN L  LP EIG  K +  + L+SN+L  LP  IG +  L  L++ +N L+++P   
Sbjct: 365 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 424

Query: 515 GTLENLHTLYLNDNTCLNNIPFE 537
             L+ L  L+L+DN     IP +
Sbjct: 425 TKLKELAALWLSDNQSKALIPLQ 447



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 180/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 130 NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 189

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 190 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLREL 249

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 250 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 309

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 310 GLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPS---------------- 353

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                             +I + H               +L  + + +N L  LP ++G+
Sbjct: 354 ------------------TIGYLH---------------SLRTLAVDENFLPELPREIGS 380

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 381 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 440

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 441 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 470


>gi|45658593|ref|YP_002679.1| hypothetical protein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|418694153|ref|ZP_13255197.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|418713547|ref|ZP_13274273.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421085480|ref|ZP_15546333.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421103545|ref|ZP_15564142.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45601837|gb|AAS71316.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|409958164|gb|EKO17061.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|410366508|gb|EKP21899.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410432116|gb|EKP76474.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|410790022|gb|EKR83717.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|456986299|gb|EMG21899.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 423

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/358 (36%), Positives = 192/358 (53%), Gaps = 4/358 (1%)

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L L F  +KT+   I  L NL  L +  N+   L  E+ +LK+L  L+L +N L  LPKE
Sbjct: 46  LDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKE 105

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           IG    L  L L  NELVN+P  +G   NL +L L  N+L  +P+ + +  +L E ++  
Sbjct: 106 IGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLS 165

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             L SLP  +   L S+ N+ L+ N+FT   S       ++ +++   N++  IP  I  
Sbjct: 166 NKLISLPTEI-EQLKSLKNLDLNHNEFTTV-SKEVMLLETLENLDLRSNKLKTIPKEI-R 222

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           + K+L  + +  N LTSLP ++     L  LNLG N+      +I  L NL  L L  N 
Sbjct: 223 QLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQ 282

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L + P  +G L+ LK L L  N++ +LP E+  L +LQ L L  N++  LP+ I  L NL
Sbjct: 283 LVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNL 342

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            +LS+  N L ++P+EIG L+ L  L L +N  L  +P E+    NLQ + LD+ P+S
Sbjct: 343 EWLSLSNNKLNALPKEIGQLKKLQRLELGNNQ-LTTLPKEIEQLKNLQRLELDSNPIS 399



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 130/381 (34%), Positives = 199/381 (52%), Gaps = 26/381 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++ NLDLS   +  LP  + +L +L++L L GN+   L  +I  + +L  L L  N LT 
Sbjct: 42  DVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTV 101

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  LQ L+ L L  N+L  LP  + +  +L+ L L  N++  +  +I  L NL  L
Sbjct: 102 LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQEL 161

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           S+  NK+  LP E+ +LK+L  LDL HN    + KE+     L  LDL+ N+L  IP  +
Sbjct: 162 SLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEI 221

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L +L  L L+ N+L S+P+ + +  +L   N                        L  
Sbjct: 222 RQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLN------------------------LGE 257

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P         +    + +NQ+ + P  +  + K+L  +++  N +T+LP+++  
Sbjct: 258 NRFQIFPVEILELKNLLELNLY-YNQLVEFPKEV-GQLKSLKYLSLYHNQITTLPVEVTQ 315

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L EL+L  N+I+ L ++I  L NLE L LSNN L  LP  IG L+KL+ L+L  N+L
Sbjct: 316 LPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQL 375

Query: 462 ESLPNEIGFLKELQRLILQSN 482
            +LP EI  LK LQRL L SN
Sbjct: 376 TTLPKEIEQLKNLQRLELDSN 396



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 190/370 (51%), Gaps = 26/370 (7%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L +LP++IG + NL  L L  N  T L   +  L+ L+ L+L +NKL  LP  + +L +L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           + L L  N +  +  +I    NL  L++ +NK+  LP E+G+L+NL  L L  N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
            EI     L  LDL HNE   +   +  L  L  L L  N+L+++P+ + +   L    +
Sbjct: 173 TEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
            G  L+SLP  +   L ++  + L  N+F  +P         +    + +NQ+ + P  +
Sbjct: 233 TGNQLTSLPKEI-EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY-YNQLVEFPKEV 290

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             + K+L  +++  N +T+LP+++     L EL+L  N+I+ L ++I  L NLE L LSN
Sbjct: 291 -GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSN 349

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N                       KL +LP EIG LK+LQRL L +NQL +LP+ I  L 
Sbjct: 350 N-----------------------KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK 386

Query: 496 NLSYLSVGEN 505
           NL  L +  N
Sbjct: 387 NLQRLELDSN 396



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 160/290 (55%), Gaps = 3/290 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L  + + +LP  + +  +L++L L  NKL  LP +IG + NL  L L  N L 
Sbjct: 110 QNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLI 169

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP  +  L+ L+ LDL HN+   +   V  L +L+ L LR N++KT+  +I+ L +L +
Sbjct: 170 SLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKV 229

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+ +L+NL TL+L  N  +  P EI     L+ L+L +N+LV  P  
Sbjct: 230 LMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKE 289

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L +L  L L +N++ ++P  +++   L E ++ G  ++ LP  +L  L ++  ++LS
Sbjct: 290 VGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEIL-QLKNLEWLSLS 348

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
            NK  A P     Q   +  +   +NQ+  +P  I  + KNL ++ +  N
Sbjct: 349 NNKLNALPK-EIGQLKKLQRLELGNNQLTTLPKEI-EQLKNLQRLELDSN 396



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 184/356 (51%), Gaps = 27/356 (7%)

Query: 206 KTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
           K +   +Q  +++  L +    ++ LP ++G+LKNL  LDL  N    L KEI     L 
Sbjct: 31  KNLAKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
            L+L +N+L  +P  +G L NL  L L  N L ++P+ + +  +L + N++   L+ LP 
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPK 150

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
            +   L ++  ++L  NK  + P+    Q  S+ +++  HN+   +   +          
Sbjct: 151 EI-GQLQNLQELSLLSNKLISLPTE-IEQLKSLKNLDLNHNEFTTVSKEVM--------- 199

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
                LL +L            L+L +N++  + ++I+ L +L+VL+L+ N L  LP  I
Sbjct: 200 -----LLETL----------ENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
             L+ LK L+L EN+ +  P EI  LK L  L L  NQLV  P+ +G L +L YLS+  N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 506 NLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            + ++P E+  L +L  L+L+ N  +  +P E+    NL+ +SL N  L+ +P EI
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGNK-ITILPKEILQLKNLEWLSLSNNKLNALPKEI 359



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 186/360 (51%), Gaps = 8/360 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  +  T L   + +L  L++L L  NKL  LP +IG + NL  L L  N L 
Sbjct: 64  KNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELV 123

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +   + L+ L+L +NKL  LP  + +L +L+ L L  N++ ++  +I+ L +L  
Sbjct: 124 NLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKN 183

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+   +  E+  L+ L  LDL  N L+ +PKEI     L  L L  N+L ++P  
Sbjct: 184 LDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKE 243

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  NR +  P  + +  +L E N+    L   P   +  L S+  ++L 
Sbjct: 244 IEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKE-VGQLKSLKYLSLY 302

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P    TQ   +  ++   N+I  +P  I  + KNL  +++ +N L +LP ++G
Sbjct: 303 HNQITTLPV-EVTQLPDLQELHLSGNKITILPKEIL-QLKNLEWLSLSNNKLNALPKEIG 360

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL--KC-LDLE 457
               L  L LG NQ++ L ++I+ L NL+ L L +N +   P     +RKL  KC +D E
Sbjct: 361 QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKLLPKCEIDFE 418



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 120/243 (49%), Gaps = 32/243 (13%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           NLDL+ +  T +   V  L  LE L L  NKL ++P +I  + +L  L L  N LTSLP 
Sbjct: 183 NLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPK 242

Query: 165 SLANLQQLRVLDL-----------------------RHNKLNELPMVVYKLTSLKILYLR 201
            +  LQ L+ L+L                        +N+L E P  V +L SLK L L 
Sbjct: 243 EIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLY 302

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N+I T+  ++  L +L  L +  NKI  LP E+ +LKNL  L L++N L  LPKEIG  
Sbjct: 303 HNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL-----ESVPETLSKCVHLNEFNVE 316
             L  L+L +N+L  +P  +  L NL RL L  N +     E + + L KC    E + E
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISPKEKERIRKLLPKC----EIDFE 418

Query: 317 GCA 319
           G  
Sbjct: 419 GGG 421



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 156/310 (50%), Gaps = 27/310 (8%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           N+   L N  ++  L LS+  L+++P  + +  +L + ++ G   + L   +   L  + 
Sbjct: 32  NLAKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQ-LKDLQ 90

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + L+ NK T  P     Q  ++  ++   N++  +P  I  + KNL K+N+ +N LT L
Sbjct: 91  KLNLNNNKLTVLPKE-IGQLQNLQELSLHSNELVNLPKEI-GQFKNLQKLNLDNNKLTVL 148

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L EL+L +N++  L  +I+ L +L+ L L++N    +   +  L  L+ LD
Sbjct: 149 PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLD 208

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ------- 508
           L  NKL+++P EI  LK L+ L+L  NQL SLP+ I  L NL  L++GEN  Q       
Sbjct: 209 LRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEIL 268

Query: 509 ----------------SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                             P+E+G L++L  L L  N  +  +P E+    +LQ + L   
Sbjct: 269 ELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ-ITTLPVEVTQLPDLQELHLSGN 327

Query: 553 PLSQIPSEIV 562
            ++ +P EI+
Sbjct: 328 KITILPKEIL 337


>gi|195109404|ref|XP_001999277.1| GI24424 [Drosophila mojavensis]
 gi|193915871|gb|EDW14738.1| GI24424 [Drosophila mojavensis]
          Length = 694

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 168/588 (28%), Positives = 254/588 (43%), Gaps = 110/588 (18%)

Query: 73  NKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLY 132
           N+    TKK+   Q  +N E  +      N  NLDLS +++TH+ P +E L  L  L L+
Sbjct: 134 NEADADTKKRTLEQLSINEEDAWWNQVPLN--NLDLSSNALTHISPKIENLLTLTVLQLH 191

Query: 133 GNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK----------- 181
            N L  LP QIG +  L  L L+ N L  LP  L +L +LR L++ HN+           
Sbjct: 192 DNALVELPPQIGKLEKLVRLNLSHNKLKELPPDLYSLPELRHLNISHNEFEELNPDISNL 251

Query: 182 ------------LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR 229
                       +N LP  +  L  L  L L  N IK + PDI Y+ +L  L +  N + 
Sbjct: 252 HMLEFLDAGNNNINSLPGGIGFLVRLTALLLANNHIKELPPDIVYMRSLQKLDLMKNDLV 311

Query: 230 ELPPELGELKNLVTLDLAHNHLEELPKEIGNCTM-----------------------LVT 266
            LP ++G L+ L  L + HN ++ELP   GN  +                       L  
Sbjct: 312 ALPEDMGLLRKLQFLYVQHNDIKELPNFEGNEMLSELHASNNYIDHVPKELCENLPHLKI 371

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           LDL+ N++  +PD +  L NL RL ++ N +  +P TLS   HL    V+G  + ++   
Sbjct: 372 LDLRDNKITQLPDEVCLLRNLNRLDITNNSISVLPVTLSTLAHLISLQVDGNPIKTIRRD 431

Query: 327 LLSSLTSINNITL-SRNKFTAYPSGG-----------------------PTQFTSVY--- 359
           +L   T+    TL  R +      GG                       P   T  Y   
Sbjct: 432 ILQCGTARILKTLHDRAQAKERADGGAEDLPCSSSAAGSQLSMQQQQQLPANMTDKYKLR 491

Query: 360 -----SINFEHNQIDKIPYGIFSRA--KNLSKVNMKDNLLTSLPLDLGTWVGL-TELNLG 411
                ++N E   +  +P  +F  A  + +  V+   N L++LP  L     L TEL L 
Sbjct: 492 HTRTLAVNLE--GLTDVPTHVFELASEEKVHVVDFARNHLSTLPKGLQHMSDLVTELVLS 549

Query: 412 TNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
            N I+ +   I     +  L LSNNL+K LP   G L  L+ L++  N+ E+LPN +  L
Sbjct: 550 HNVINNVPPFISQFTRITFLNLSNNLIKDLPPEFGLLNTLRELNIANNRFEALPNALYEL 609

Query: 472 KELQRLILQSNQLVSLPRA-IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           + L+ LI   NQ+ ++  A + +L  LS L +  NN++ +P  +G L N+  L L  N  
Sbjct: 610 QGLEILIASDNQIKAINVAGLQNLPRLSTLDLRNNNIEYVPPTLGNLTNITHLELVGN-- 667

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGP 578
                                 P  Q   +I++ G   I+ YL+ + P
Sbjct: 668 ----------------------PFRQPRHQILMKGTDSIMSYLRDRIP 693


>gi|395730377|ref|XP_002810755.2| PREDICTED: leucine-rich repeat-containing protein 7 [Pongo abelii]
          Length = 1537

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 192/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 24  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSN 83

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F   P  
Sbjct: 144 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFGELPE- 201

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 202 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 238 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 297

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 298 LSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 356

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 357 LEFLPEEIGQMQKLRVLNLSDNRLKNLP 384



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 202/443 (45%), Gaps = 50/443 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q            
Sbjct: 17  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q LR L +  N L+ LP  +  L +LK L +  N ++    +I+ 
Sbjct: 65  -----------LFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKC 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G    L  L+L+ N L
Sbjct: 114 CKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    +PE L +  +L E  ++  AL  LP G +  L  +
Sbjct: 174 KTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLP-GSIGKLKML 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N+              + +++ +            S  + L  + +  N+L  
Sbjct: 233 VYLDMSKNR--------------IETVDMD-----------ISGCEALEDLLLSSNMLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    LT L +  NQ++ L   I NL  LE    S N L+ LPS+IG L  L+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            ++EN L  LP EIG  K +  + L+SN+L  LP  IG +  L  L++ +N L+++P   
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFE 537
             L+ L  L+L+DN     IP +
Sbjct: 388 TKLKELAALWLSDNQSKALIPLQ 410



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 180/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 93  NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 152

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 153 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLREL 212

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 213 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 272

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 273 GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS---------------- 316

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                             +I + H               +L  + + +N L  LP ++G+
Sbjct: 317 ------------------TIGYLH---------------SLRTLAVDENFLPELPREIGS 343

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 344 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 403

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 404 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 433



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 183/402 (45%), Gaps = 61/402 (15%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + K+   C+   +  L +  + +++LP ++  L +L+EL +  N +   P  I     LT
Sbjct: 61  LPKQLFNCQA--LRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 118

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            +  + N ++ LPD    L  L  L L    L  LP    +L  L+IL LR N +KT+  
Sbjct: 119 IIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPK 178

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
            +  L+ L  L + +N+  ELP  L +++NL  L + +N L+ LP  IG   MLV LD  
Sbjct: 179 SMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD-- 236

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLL 328
                                +S NR+E+V   +S C  L +  +    L  LPD  GLL
Sbjct: 237 ---------------------MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLL 275

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
             LT                           ++  + NQ+  +P  I     NLS +   
Sbjct: 276 KKLT---------------------------TLKVDDNQLTMLPNTI----GNLSLLEEF 304

Query: 389 D---NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           D   N L SLP  +G    L  L +  N + +L  +I +  N+ V+ L +N L+ LP  I
Sbjct: 305 DCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           G ++KL+ L+L +N+L++LP     LKEL  L L  NQ  +L
Sbjct: 365 GQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 406


>gi|291238114|ref|XP_002738976.1| PREDICTED: PDZ-domain protein scribble-like [Saccoglossus
           kowalevskii]
          Length = 1478

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 128/386 (33%), Positives = 200/386 (51%), Gaps = 16/386 (4%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+ +++ RH  L  +P  VY+   SL+ LYL  N+++ ++     L N+  L + DN+I
Sbjct: 13  RQVDIIERRHCNLTMIPDDVYRYARSLEELYLDANQLRELNRPFFRLLNIRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPPE+G   NL+ LD++ N + E+P+ I  C  L   D   N +  +PD    L +LT
Sbjct: 73  EALPPEVGNFMNLIELDISRNDIMEIPENIKFCKKLQVCDFSGNPISKLPDGFTQLRDLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L  +P  +    +L    +    L  LP  L S L  +  + L  N+    P
Sbjct: 133 HLCLNDVSLTRLPPDIGSLSNLITLELRENLLKFLPTSL-SFLVKLEQLDLGSNELEELP 191

Query: 349 S--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV---NMKDNLLTSLPLDLGTWV 403
              G       ++    + N++ ++P  I     NLSK+   ++ +N L SLP ++G   
Sbjct: 192 ETLGALPNLMELW---LDCNELTELPAEI----GNLSKLMCLDVSENRLESLPEEIGGLG 244

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            LT+L+L  N I +L E I NL  + +L +  N L  L ++IG+   L+ L L EN L+ 
Sbjct: 245 NLTDLHLSQNCIERLPEGIGNLKQMTILKIDQNRLVALTAAIGSCECLQELILTENLLQE 304

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           LP  IG LK+L  L +  N+L S+P  +G    L  LS+ EN L  IP EIG+L+ LH L
Sbjct: 305 LPATIGLLKKLNNLNVDRNRLKSVPIELGRCHKLGVLSLRENMLTEIPSEIGSLKELHVL 364

Query: 524 YLNDNTCLNNIPFELALCSNLQIMSL 549
            L+ N  +  +P  +A C NL+ + L
Sbjct: 365 DLSGNR-IEYLPLRIAQC-NLKALWL 388



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 184/397 (46%), Gaps = 28/397 (7%)

Query: 113 ITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQ 171
           +T +P  V +    LEELYL  N+L  L      + N+  LGL++N + +LP  + N   
Sbjct: 25  LTMIPDDVYRYARSLEELYLDANQLRELNRPFFRLLNIRKLGLSDNEIEALPPEVGNFMN 84

Query: 172 LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
           L  LD+  N + E+P  +     L++     N I  +      L +L+ L + D  +  L
Sbjct: 85  LIELDISRNDIMEIPENIKFCKKLQVCDFSGNPISKLPDGFTQLRDLTHLCLNDVSLTRL 144

Query: 232 PPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLR 291
           PP++G L NL+TL+L  N L+ LP  +     L  LDL  NEL  +P+ LG L NL  L 
Sbjct: 145 PPDIGSLSNLITLELRENLLKFLPTSLSFLVKLEQLDLGSNELEELPETLGALPNLMELW 204

Query: 292 LSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGG 351
           L  N L  +P  +     L   +V    L SLP+     +  + N+T             
Sbjct: 205 LDCNELTELPAEIGNLSKLMCLDVSENRLESLPE----EIGGLGNLT------------- 247

Query: 352 PTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLG 411
                    ++   N I+++P GI    K ++ + +  N L +L   +G+   L EL L 
Sbjct: 248 --------DLHLSQNCIERLPEGI-GNLKQMTILKIDQNRLVALTAAIGSCECLQELILT 298

Query: 412 TNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
            N + +L   I  L  L  L +  N LK +P  +G   KL  L L EN L  +P+EIG L
Sbjct: 299 ENLLQELPATIGLLKKLNNLNVDRNRLKSVPIELGRCHKLGVLSLRENMLTEIPSEIGSL 358

Query: 472 KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
           KEL  L L  N++  LP  I    NL  L + EN  Q
Sbjct: 359 KELHVLDLSGNRIEYLPLRIAQ-CNLKALWLSENQAQ 394



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 173/365 (47%), Gaps = 27/365 (7%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           NI  L LS + I  LPP V    +L EL +  N +  +P  I +   L     + N ++ 
Sbjct: 61  NIRKLGLSDNEIEALPPEVGNFMNLIELDISRNDIMEIPENIKFCKKLQVCDFSGNPISK 120

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LPD    L+ L  L L    L  LP  +  L++L  L LR N +K +   + +L  L  L
Sbjct: 121 LPDGFTQLRDLTHLCLNDVSLTRLPPDIGSLSNLITLELRENLLKFLPTSLSFLVKLEQL 180

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++ ELP  LG L NL+ L L  N L ELP EIGN + L+ LD+  N L ++P+ +
Sbjct: 181 DLGSNELEELPETLGALPNLMELWLDCNELTELPAEIGNLSKLMCLDVSENRLESLPEEI 240

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L NLT L LS N +E +PE +     +    ++   L +L    + S   +  + L+ 
Sbjct: 241 GGLGNLTDLHLSQNCIERLPEGIGNLKQMTILKIDQNRLVALT-AAIGSCECLQELILTE 299

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N     P+                        G+    K L+ +N+  N L S+P++LG 
Sbjct: 300 NLLQELPA----------------------TIGLL---KKLNNLNVDRNRLKSVPIELGR 334

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L+L  N ++++  +I +L  L VL LS N ++ LP  I     LK L L EN+ 
Sbjct: 335 CHKLGVLSLRENMLTEIPSEIGSLKELHVLDLSGNRIEYLPLRIAQC-NLKALWLSENQA 393

Query: 462 ESLPN 466
           + + N
Sbjct: 394 QPMLN 398


>gi|397521140|ref|XP_003830661.1| PREDICTED: leucine-rich repeat-containing protein 7 [Pan paniscus]
          Length = 1537

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 192/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 24  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSN 83

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F   P  
Sbjct: 144 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFGELPE- 201

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 202 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 238 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 297

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 298 LSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 356

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 357 LEFLPEEIGQMQKLRVLNLSDNRLKNLP 384



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 202/443 (45%), Gaps = 50/443 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q            
Sbjct: 17  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q LR L +  N L+ LP  +  L +LK L +  N ++    +I+ 
Sbjct: 65  -----------LFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKC 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G    L  L+L+ N L
Sbjct: 114 CKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    +PE L +  +L E  ++  AL  LP G +  L  +
Sbjct: 174 KTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLP-GSIGKLKML 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N+              + +++ +            S  + L  + +  N+L  
Sbjct: 233 VYLDMSKNR--------------IETVDMD-----------ISGCEALEDLLLSSNMLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    LT L +  NQ++ L   I NL  LE    S N L+ LPS+IG L  L+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            ++EN L  LP EIG  K +  + L+SN+L  LP  IG +  L  L++ +N L+++P   
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFE 537
             L+ L  L+L+DN     IP +
Sbjct: 388 TKLKELAALWLSDNQSKALIPLQ 410



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 180/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 93  NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 152

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 153 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLREL 212

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 213 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 272

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 273 GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS---------------- 316

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                             +I + H               +L  + + +N L  LP ++G+
Sbjct: 317 ------------------TIGYLH---------------SLRTLAVDENFLPELPREIGS 343

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 344 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 403

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 404 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 433



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 183/402 (45%), Gaps = 61/402 (15%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + K+   C+   +  L +  + +++LP ++  L +L+EL +  N +   P  I     LT
Sbjct: 61  LPKQLFNCQA--LRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 118

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            +  + N ++ LPD    L  L  L L    L  LP    +L  L+IL LR N +KT+  
Sbjct: 119 IIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPK 178

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
            +  L+ L  L + +N+  ELP  L +++NL  L + +N L+ LP  IG   MLV LD  
Sbjct: 179 SMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD-- 236

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLL 328
                                +S NR+E+V   +S C  L +  +    L  LPD  GLL
Sbjct: 237 ---------------------MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLL 275

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
             LT                           ++  + NQ+  +P  I     NLS +   
Sbjct: 276 KKLT---------------------------TLKVDDNQLTMLPNTI----GNLSLLEEF 304

Query: 389 D---NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           D   N L SLP  +G    L  L +  N + +L  +I +  N+ V+ L +N L+ LP  I
Sbjct: 305 DCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           G ++KL+ L+L +N+L++LP     LKEL  L L  NQ  +L
Sbjct: 365 GQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 406


>gi|418710297|ref|ZP_13271068.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410769233|gb|EKR44475.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 423

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 130/381 (34%), Positives = 199/381 (52%), Gaps = 26/381 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++ NLDLS   +  LP  + +L +L++L L GN+   L  +I  + +L  L L  N LT 
Sbjct: 42  DVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTV 101

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  LQ L+ L L  N+L  LP  + +  +L+ L L  N++  +  +I  L NL  L
Sbjct: 102 LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQEL 161

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           S+  NK+  LP E+ +LK+L  LDL HN    + KE+     L  LDL+ N+L  IP  +
Sbjct: 162 SLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEI 221

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L +L  L L+ N+L S+P+ + +  +L   N                        L  
Sbjct: 222 RQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLN------------------------LGE 257

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P         +    + +NQ+ + P  +  + K+L  +++  N +T+LP+++  
Sbjct: 258 NRFQIFPVEILELKNLLELNLY-YNQLVEFPKEV-GQLKSLKYLSLYHNQITTLPVEVTQ 315

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L EL+L  N+I+ L ++I  L NLE L LSNN L  LP  IG L+KL+ L+L  N+L
Sbjct: 316 LPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQL 375

Query: 462 ESLPNEIGFLKELQRLILQSN 482
            +LP EI  LK LQRL L SN
Sbjct: 376 TTLPKEIEQLKNLQRLELDSN 396



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/358 (36%), Positives = 192/358 (53%), Gaps = 4/358 (1%)

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L L F  +KT+   I  L NL  L +  N+   L  E+ +LK+L  L+L +N L  LPKE
Sbjct: 46  LDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKE 105

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           IG    L  L L  NELVN+P  +G   NL +L L  N+L  +P+ + +  +L E ++  
Sbjct: 106 IGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLS 165

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             L SLP  +   L S+ N+ L+ N+FT   S       ++ +++   N++  IP  I  
Sbjct: 166 NKLISLPTEI-EQLKSLKNLDLNHNEFTTV-SKEVMLLETLENLDLRSNKLKTIPKEI-R 222

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           + K+L  + +  N LTSLP ++     L  LNLG N+      +I  L NL  L L  N 
Sbjct: 223 QLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQ 282

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L + P  +G L+ LK L L  N++ +LP E+  L +LQ L L  N++  LP+ I  L NL
Sbjct: 283 LVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNL 342

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            +LS+  N L ++P+EIG L+ L  L L +N  L  +P E+    NLQ + LD+ P+S
Sbjct: 343 EWLSLSNNKLNALPKEIGQLKKLQRLELGNNQ-LTTLPKEIEQLKNLQRLELDSNPIS 399



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 190/370 (51%), Gaps = 26/370 (7%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L +LP++IG + NL  L L  N  T L   +  L+ L+ L+L +NKL  LP  + +L +L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           + L L  N +  +  +I    NL  L++ +NK+  LP E+G+L+NL  L L  N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
            EI     L  LDL HNE   +   +  L  L  L L  N+L+++P+ + +   L    +
Sbjct: 173 TEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
            G  L+SLP  +   L ++  + L  N+F  +P         +    + +NQ+ + P  +
Sbjct: 233 TGNQLTSLPKEI-EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY-YNQLVEFPKEV 290

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             + K+L  +++  N +T+LP+++     L EL+L  N+I+ L ++I  L NLE L LSN
Sbjct: 291 -GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSN 349

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N                       KL +LP EIG LK+LQRL L +NQL +LP+ I  L 
Sbjct: 350 N-----------------------KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK 386

Query: 496 NLSYLSVGEN 505
           NL  L +  N
Sbjct: 387 NLQRLELDSN 396



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 160/290 (55%), Gaps = 3/290 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L  + + +LP  + +  +L++L L  NKL  LP +IG + NL  L L  N L 
Sbjct: 110 QNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLI 169

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP  +  L+ L+ LDL HN+   +   V  L +L+ L LR N++KT+  +I+ L +L +
Sbjct: 170 SLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKV 229

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+ +L+NL TL+L  N  +  P EI     L+ L+L +N+LV  P  
Sbjct: 230 LMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKE 289

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L +L  L L +N++ ++P  +++   L E ++ G  ++ LP  +L  L ++  ++LS
Sbjct: 290 VGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEIL-QLKNLEWLSLS 348

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
            NK  A P     Q   +  +   +NQ+  +P  I  + KNL ++ +  N
Sbjct: 349 NNKLNALPK-EIGQLKKLQRLELGNNQLTTLPKEI-EQLKNLQRLELDSN 396



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 184/356 (51%), Gaps = 27/356 (7%)

Query: 206 KTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
           K +   +Q  +++  L +    ++ LP ++G+LKNL  LDL  N    L KEI     L 
Sbjct: 31  KNLEKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
            L+L +N+L  +P  +G L NL  L L  N L ++P+ + +  +L + N++   L+ LP 
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPK 150

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
            +   L ++  ++L  NK  + P+    Q  S+ +++  HN+   +   +          
Sbjct: 151 EI-GQLQNLQELSLLSNKLISLPTE-IEQLKSLKNLDLNHNEFTTVSKEVM--------- 199

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
                LL +L            L+L +N++  + ++I+ L +L+VL+L+ N L  LP  I
Sbjct: 200 -----LLETL----------ENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
             L+ LK L+L EN+ +  P EI  LK L  L L  NQLV  P+ +G L +L YLS+  N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 506 NLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            + ++P E+  L +L  L+L+ N  +  +P E+    NL+ +SL N  L+ +P EI
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGNK-ITILPKEILQLKNLEWLSLSNNKLNALPKEI 359



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 175/336 (52%), Gaps = 3/336 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  +  T L   + +L  L++L L  NKL  LP +IG + NL  L L  N L 
Sbjct: 64  KNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELV 123

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +   + L+ L+L +NKL  LP  + +L +L+ L L  N++ ++  +I+ L +L  
Sbjct: 124 NLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKN 183

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+   +  E+  L+ L  LDL  N L+ +PKEI     L  L L  N+L ++P  
Sbjct: 184 LDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKE 243

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  NR +  P  + +  +L E N+    L   P   +  L S+  ++L 
Sbjct: 244 IEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKE-VGQLKSLKYLSLY 302

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P    TQ   +  ++   N+I  +P  I  + KNL  +++ +N L +LP ++G
Sbjct: 303 HNQITTLPV-EVTQLPDLQELHLSGNKITILPKEIL-QLKNLEWLSLSNNKLNALPKEIG 360

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
               L  L LG NQ++ L ++I+ L NL+ L L +N
Sbjct: 361 QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 119/243 (48%), Gaps = 32/243 (13%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           NLDL+ +  T +   V  L  LE L L  NKL ++P +I  + +L  L L  N LTSLP 
Sbjct: 183 NLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPK 242

Query: 165 SLANLQQLRVLDL-----------------------RHNKLNELPMVVYKLTSLKILYLR 201
            +  LQ L+ L+L                        +N+L E P  V +L SLK L L 
Sbjct: 243 EIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLY 302

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N+I T+  ++  L +L  L +  NKI  LP E+ +LKNL  L L++N L  LPKEIG  
Sbjct: 303 HNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL-----ESVPETLSKCVHLNEFNVE 316
             L  L+L +N+L  +P  +  L NL RL L  N +     E +   L KC    E + E
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISPKEKERIRTLLPKC----EIDFE 418

Query: 317 GCA 319
           G  
Sbjct: 419 GGG 421



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 156/310 (50%), Gaps = 27/310 (8%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           N+   L N  ++  L LS+  L+++P  + +  +L + ++ G   + L   +   L  + 
Sbjct: 32  NLEKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQ-LKDLQ 90

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + L+ NK T  P     Q  ++  ++   N++  +P  I  + KNL K+N+ +N LT L
Sbjct: 91  KLNLNNNKLTVLPKE-IGQLQNLQELSLHSNELVNLPKEI-GQFKNLQKLNLDNNKLTVL 148

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L EL+L +N++  L  +I+ L +L+ L L++N    +   +  L  L+ LD
Sbjct: 149 PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLD 208

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ------- 508
           L  NKL+++P EI  LK L+ L+L  NQL SLP+ I  L NL  L++GEN  Q       
Sbjct: 209 LRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEIL 268

Query: 509 ----------------SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                             P+E+G L++L  L L  N  +  +P E+    +LQ + L   
Sbjct: 269 ELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ-ITTLPVEVTQLPDLQELHLSGN 327

Query: 553 PLSQIPSEIV 562
            ++ +P EI+
Sbjct: 328 KITILPKEIL 337


>gi|195451908|ref|XP_002073128.1| GK13318 [Drosophila willistoni]
 gi|194169213|gb|EDW84114.1| GK13318 [Drosophila willistoni]
          Length = 1874

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T ++N+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGSCENMQELILTENFLSELP-ASIGRMTKLSNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLQRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T LS L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GSCENMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 207/424 (48%), Gaps = 51/424 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LGL++N +  LP 
Sbjct: 18  VDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLQRLRKLGLSDNEIGRLPP 77

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            + N + L  LD+  N + ++P  +  L SL++     N I  +      L NL++L + 
Sbjct: 78  DIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLN 137

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE+ ++P  LG L
Sbjct: 138 DMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYL 197

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             L  L L +N+L+ +P  L                     GLL+ LT ++   +S N+ 
Sbjct: 198 PGLHELWLDHNQLQRLPPEL---------------------GLLTKLTYLD---VSENRL 233

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
              P                 N+I     G+ S    L+ +++  NLL +LP  +     
Sbjct: 234 EELP-----------------NEIS----GLVS----LTDLDLAQNLLETLPDGIAKLSR 268

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LT L L  N++ +L++ + +  N++ L+L+ N L +LP+SIG + KL  L+++ N LE L
Sbjct: 269 LTILKLDQNRLQRLNDTLGSCENMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYL 328

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  +  L+ L  ++
Sbjct: 329 PLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQ-LKAVW 387

Query: 525 LNDN 528
           L++N
Sbjct: 388 LSEN 391



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 189/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLQRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG ++ 
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDG-IAK 265

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           L+ +  + L +N+                                    +N+ ++ + +N
Sbjct: 266 LSRLTILKLDQNRLQRL-------------------------NDTLGSCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L+ LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGRMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|16904383|ref|NP_065845.1| leucine-rich repeat-containing protein 7 [Homo sapiens]
 gi|114557139|ref|XP_513481.2| PREDICTED: leucine-rich repeat-containing protein 7 isoform 3 [Pan
           troglodytes]
 gi|426329990|ref|XP_004026012.1| PREDICTED: leucine-rich repeat-containing protein 7 [Gorilla
           gorilla gorilla]
 gi|50401129|sp|Q96NW7.1|LRRC7_HUMAN RecName: Full=Leucine-rich repeat-containing protein 7; AltName:
           Full=Densin-180; Short=Densin; AltName: Full=Protein
           LAP1
 gi|16755893|gb|AAL28133.1|AF434715_1 densin-180 [Homo sapiens]
 gi|119626867|gb|EAX06462.1| leucine rich repeat containing 7, isoform CRA_b [Homo sapiens]
          Length = 1537

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 192/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 24  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSN 83

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F   P  
Sbjct: 144 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFGELPE- 201

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 202 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 238 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 297

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 298 LSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 356

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 357 LEFLPEEIGQMQKLRVLNLSDNRLKNLP 384



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 202/443 (45%), Gaps = 50/443 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q            
Sbjct: 17  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q LR L +  N L+ LP  +  L +LK L +  N ++    +I+ 
Sbjct: 65  -----------LFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKC 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G    L  L+L+ N L
Sbjct: 114 CKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    +PE L +  +L E  ++  AL  LP G +  L  +
Sbjct: 174 KTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLP-GSIGKLKML 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N+              + +++ +            S  + L  + +  N+L  
Sbjct: 233 VYLDMSKNR--------------IETVDMD-----------ISGCEALEDLLLSSNMLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    LT L +  NQ++ L   I NL  LE    S N L+ LPS+IG L  L+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            ++EN L  LP EIG  K +  + L+SN+L  LP  IG +  L  L++ +N L+++P   
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFE 537
             L+ L  L+L+DN     IP +
Sbjct: 388 TKLKELAALWLSDNQSKALIPLQ 410



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 180/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 93  NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 152

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 153 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLREL 212

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 213 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 272

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 273 GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS---------------- 316

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                             +I + H               +L  + + +N L  LP ++G+
Sbjct: 317 ------------------TIGYLH---------------SLRTLAVDENFLPELPREIGS 343

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 344 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 403

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 404 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 433



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 183/402 (45%), Gaps = 61/402 (15%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + K+   C+   +  L +  + +++LP ++  L +L+EL +  N +   P  I     LT
Sbjct: 61  LPKQLFNCQA--LRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 118

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            +  + N ++ LPD    L  L  L L    L  LP    +L  L+IL LR N +KT+  
Sbjct: 119 IIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPK 178

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
            +  L+ L  L + +N+  ELP  L +++NL  L + +N L+ LP  IG   MLV LD  
Sbjct: 179 SMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD-- 236

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLL 328
                                +S NR+E+V   +S C  L +  +    L  LPD  GLL
Sbjct: 237 ---------------------MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLL 275

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
             LT                           ++  + NQ+  +P  I     NLS +   
Sbjct: 276 KKLT---------------------------TLKVDDNQLTMLPNTI----GNLSLLEEF 304

Query: 389 D---NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           D   N L SLP  +G    L  L +  N + +L  +I +  N+ V+ L +N L+ LP  I
Sbjct: 305 DCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           G ++KL+ L+L +N+L++LP     LKEL  L L  NQ  +L
Sbjct: 365 GQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 406


>gi|195574155|ref|XP_002105055.1| GD21289 [Drosophila simulans]
 gi|194200982|gb|EDX14558.1| GD21289 [Drosophila simulans]
          Length = 2647

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T ++N+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLSNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RN------------------------------------------------ALEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T LS L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 211/435 (48%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F  C  + +  +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LG
Sbjct: 8   FKGCNRQ-VEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLG 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  + N + L  LD+  N + ++P  +  L SL++     N I  +     
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL++L + D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + ++P  LG L  L  L L +N+L+ +P  L                     GLL+ LT 
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPEL---------------------GLLTKLTY 225

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           ++   +S N+    P                 N+I     G+ S    L+ +++  NLL 
Sbjct: 226 LD---VSENRLEELP-----------------NEIS----GLVS----LTDLDLAQNLLE 257

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP  +     LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  
Sbjct: 258 ALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLSN 317

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+++ N LE LP EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  
Sbjct: 318 LNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYS 377

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  ++L++N
Sbjct: 378 LVNLQ-LKAVWLSEN 391



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 192/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L+ LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|119626869|gb|EAX06464.1| leucine rich repeat containing 7, isoform CRA_d [Homo sapiens]
          Length = 1573

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 200/389 (51%), Gaps = 7/389 (1%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 61  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSN 120

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 121 LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 180

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F   P  
Sbjct: 181 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFGELPEV 239

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              Q  ++  +  ++N +  +P G++ + K L  ++M  N + ++ +D+     L +L L
Sbjct: 240 L-DQIQNLRELWMDNNALQVLP-GVW-KLKMLVYLDMSKNRIETVDMDISGCEALEDLLL 296

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
            +N + +L + I  L  L  L + +N L  LP++IGNL  L+  D   N+LESLP+ IG+
Sbjct: 297 SSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY 356

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+ L +  N L  LPR IG   N++ +S+  N L+ +PEEIG ++ L  L L+DN  
Sbjct: 357 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNR- 415

Query: 531 LNNIPFELALCSNLQIMSL-DNCPLSQIP 558
           L N+PF       L  + L DN   + IP
Sbjct: 416 LKNLPFSFTKLKELAALWLSDNQSKALIP 444



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 197/427 (46%), Gaps = 50/427 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 54  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSI 113

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L++LP ++A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 114 PDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 173

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 174 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 233

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPET--LSKCVHLN---------EFNVEGCALSSL 323
             +P++L  + NL  L +  N L+ +P    L   V+L+         + ++ GC   +L
Sbjct: 234 GELPEVLDQIQNLRELWMDNNALQVLPGVWKLKMLVYLDMSKNRIETVDMDISGC--EAL 291

Query: 324 PDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
            D LLSS                                   N + ++P  I    K L+
Sbjct: 292 EDLLLSS-----------------------------------NMLQQLPDSI-GLLKKLT 315

Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
            + + DN LT LP  +G    L E +   N++  L   I  L +L  L +  N L +LP 
Sbjct: 316 TLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 375

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
            IG+ + +  + L  NKLE LP EIG +++L+ L L  N+L +LP +   L  L+ L + 
Sbjct: 376 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 435

Query: 504 ENNLQSI 510
           +N  +++
Sbjct: 436 DNQSKAL 442


>gi|313229869|emb|CBY07574.1| unnamed protein product [Oikopleura dioica]
          Length = 622

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 243/507 (47%), Gaps = 83/507 (16%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           NL+L  + I  +P SV KL +L +  +  NK+ S+P  I     L  + L  N L  LP 
Sbjct: 78  NLELQGNDIKKIPKSVGKLKNLSKFDMSKNKIKSVPRSISKANKLETVNLNNNDLRKLPP 137

Query: 165 SLANL-QQLRVLDLRHNKLNELPMVVY-----------KLTSL-------------KILY 199
            +  + +QL++L++  N L +LP  VY           K++SL             + L+
Sbjct: 138 KVGQIGRQLKILNVSGNSLKKLPKSVYVLRGAVNASDNKISSLPGVTSTKKTKPTIEALF 197

Query: 200 LRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIG 259
           L  N I+ +      L  L  L + +NK+  LP  +G +  L +LDL +N + ELP++ G
Sbjct: 198 LANNDIEEIPESFSKLMYLLQLDLANNKVASLPSTIGNINYLTSLDLRNNEVFELPEDFG 257

Query: 260 NCTM-LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE-- 316
                L  L+L  N+L ++P+ LG L ++  L LS N++ ++PET+  C  L +F++   
Sbjct: 258 RLKFSLQYLNLSGNKLESLPNSLGTLSHIEELNLSNNQIATIPETIFGCKRLIKFDISQN 317

Query: 317 ---GC----ALSSLPDGLLSS----------LTSINNITLSRNKFTAYP-------SG-- 350
               C     L+SL    LSS          L SI  I LS+N+ ++         SG  
Sbjct: 318 LLISCDNLSGLASLEIANLSSNRIAEIAELKLDSIAQIDLSKNELSSCENLEDLKLSGCG 377

Query: 351 --GPTQFTS----VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
                +F S    +  I+F  N I +I   + +R + L   N+  N L+SLP  +     
Sbjct: 378 LESLDEFISKLIFLQHIDFSENNISEISTTLINRWRYLRTANLSKNQLSSLPKGIRNMQH 437

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L +L+L  N+ ++  E+ + L  L  L L+NNL++  P + G L+ L+ +DL  N++E L
Sbjct: 438 LGKLDLSFNKFTEFDENFKILRALTELKLNNNLIQTCPKNFGELKSLRFVDLSHNEIEEL 497

Query: 465 PNE-------IGFLK----------------ELQRLILQSNQLVSLPRAIGHLTNLSYLS 501
           P+E       + FLK                 LQ + L  N++  LP AI ++  +  ++
Sbjct: 498 PSEQLDTISSLHFLKATNNKITVFPDNLQHLRLQEIDLSDNEIKELPTAIRNMKTVRKMN 557

Query: 502 VGENNLQSIPEEIGTLENLHTLYLNDN 528
           +  N+L+ IP++I  + +L  L +  N
Sbjct: 558 LQNNSLELIPDQIEKMASLRVLNIEGN 584



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 126/501 (25%), Positives = 219/501 (43%), Gaps = 108/501 (21%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYV-TNLTCLGLAEN 157
           K +N+   D+SK+ I  +P S+ K   LE + L  N L  LP ++G +   L  L ++ N
Sbjct: 95  KLKNLSKFDMSKNKIKSVPRSISKANKLETVNLNNNDLRKLPPKVGQIGRQLKILNVSGN 154

Query: 158 SLTSLPDSLANLQ------------------------QLRVLDLRHNKLNELPMVVYKLT 193
           SL  LP S+  L+                         +  L L +N + E+P    KL 
Sbjct: 155 SLKKLPKSVYVLRGAVNASDNKISSLPGVTSTKKTKPTIEALFLANNDIEEIPESFSKLM 214

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELK-NLVTLDLAHNHLE 252
            L  L L  N++ ++   I  ++ L+ L +R+N++ ELP + G LK +L  L+L+ N LE
Sbjct: 215 YLLQLDLANNKVASLPSTIGNINYLTSLDLRNNEVFELPEDFGRLKFSLQYLNLSGNKLE 274

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIP----------------------DMLGNLINLTRL 290
            LP  +G  + +  L+L +N++  IP                      D L  L +L   
Sbjct: 275 SLPNSLGTLSHIEELNLSNNQIATIPETIFGCKRLIKFDISQNLLISCDNLSGLASLEIA 334

Query: 291 RLSYNRLESVPE--------------TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
            LS NR+  + E               LS C +L +  + GC L SL D  +S L  + +
Sbjct: 335 NLSSNRIAEIAELKLDSIAQIDLSKNELSSCENLEDLKLSGCGLESL-DEFISKLIFLQH 393

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI--------------------- 375
           I  S N  +   +    ++  + + N   NQ+  +P GI                     
Sbjct: 394 IDFSENNISEISTTLINRWRYLRTANLSKNQLSSLPKGIRNMQHLGKLDLSFNKFTEFDE 453

Query: 376 -FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL-SEDIQNLVNLEVLV- 432
            F   + L+++ + +NL+ + P + G    L  ++L  N+I +L SE +  + +L  L  
Sbjct: 454 NFKILRALTELKLNNNLIQTCPKNFGELKSLRFVDLSHNEIEELPSEQLDTISSLHFLKA 513

Query: 433 ---------------------LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
                                LS+N +K+LP++I N++ ++ ++L+ N LE +P++I  +
Sbjct: 514 TNNKITVFPDNLQHLRLQEIDLSDNEIKELPTAIRNMKTVRKMNLQNNSLELIPDQIEKM 573

Query: 472 KELQRLILQSNQLVSLPRAIG 492
             L+ L ++ N L   P+   
Sbjct: 574 ASLRVLNIEGNFLRFYPKCFA 594



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 56/105 (53%)

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N ++ +PN IG +  L+ L LQ N +  +P+++G L NLS   + +N ++S+P  I    
Sbjct: 61  NVIKKVPNGIGKISRLRNLELQGNDIKKIPKSVGKLKNLSKFDMSKNKIKSVPRSISKAN 120

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVV 563
            L T+ LN+N      P    +   L+I+++    L ++P  + V
Sbjct: 121 KLETVNLNNNDLRKLPPKVGQIGRQLKILNVSGNSLKKLPKSVYV 165


>gi|119626866|gb|EAX06461.1| leucine rich repeat containing 7, isoform CRA_a [Homo sapiens]
          Length = 1527

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 192/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 61  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSN 120

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 121 LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 180

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F   P  
Sbjct: 181 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFGELPE- 238

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 239 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 274

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 275 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 334

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 335 LSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 393

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 394 LEFLPEEIGQMQKLRVLNLSDNRLKNLP 421



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 202/443 (45%), Gaps = 50/443 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q            
Sbjct: 54  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQ------------ 101

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q LR L +  N L+ LP  +  L +LK L +  N ++    +I+ 
Sbjct: 102 -----------LFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKC 150

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G    L  L+L+ N L
Sbjct: 151 CKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHL 210

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    +PE L +  +L E  ++  AL  LP G +  L  +
Sbjct: 211 KTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLP-GSIGKLKML 269

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N+              + +++ +            S  + L  + +  N+L  
Sbjct: 270 VYLDMSKNR--------------IETVDMD-----------ISGCEALEDLLLSSNMLQQ 304

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    LT L +  NQ++ L   I NL  LE    S N L+ LPS+IG L  L+ L
Sbjct: 305 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 364

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            ++EN L  LP EIG  K +  + L+SN+L  LP  IG +  L  L++ +N L+++P   
Sbjct: 365 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 424

Query: 515 GTLENLHTLYLNDNTCLNNIPFE 537
             L+ L  L+L+DN     IP +
Sbjct: 425 TKLKELAALWLSDNQSKALIPLQ 447



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 180/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 130 NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 189

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 190 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLREL 249

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 250 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 309

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 310 GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS---------------- 353

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                             +I + H               +L  + + +N L  LP ++G+
Sbjct: 354 ------------------TIGYLH---------------SLRTLAVDENFLPELPREIGS 380

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 381 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 440

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 441 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 470



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 183/402 (45%), Gaps = 61/402 (15%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + K+   C+   +  L +  + +++LP ++  L +L+EL +  N +   P  I     LT
Sbjct: 98  LPKQLFNCQA--LRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 155

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            +  + N ++ LPD    L  L  L L    L  LP    +L  L+IL LR N +KT+  
Sbjct: 156 IIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPK 215

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
            +  L+ L  L + +N+  ELP  L +++NL  L + +N L+ LP  IG   MLV LD  
Sbjct: 216 SMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD-- 273

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLL 328
                                +S NR+E+V   +S C  L +  +    L  LPD  GLL
Sbjct: 274 ---------------------MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLL 312

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
             LT                           ++  + NQ+  +P  I     NLS +   
Sbjct: 313 KKLT---------------------------TLKVDDNQLTMLPNTI----GNLSLLEEF 341

Query: 389 D---NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           D   N L SLP  +G    L  L +  N + +L  +I +  N+ V+ L +N L+ LP  I
Sbjct: 342 DCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 401

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           G ++KL+ L+L +N+L++LP     LKEL  L L  NQ  +L
Sbjct: 402 GQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 443


>gi|407044559|gb|EKE42674.1| leucine-rich repeat containing protein [Entamoeba nuttalli P19]
          Length = 508

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 234/484 (48%), Gaps = 37/484 (7%)

Query: 121 EKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHN 180
           +KL     + + G  L+  P QI      T    ++N  TS+P+ +  +  L VL L +N
Sbjct: 13  KKLLTQSSIEISGKNLSEFPKQISKCV-CTNFNASQNDFTSIPEDVCLMPNLEVLTLSNN 71

Query: 181 KLNELPMVVYKLTSLKILYL-------------------------RFNRIKTVHPDIQYL 215
           ++  +P  + K ++L+ LYL                           N+++++ P+I  L
Sbjct: 72  RITSIPDSIQKASNLRELYLGKNNLFYDGISSEIKMCSNLQRLDISMNKLESIPPEIGSL 131

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
            +L  L++ +N ++ LPPE+G L  L TL +  N + +LP EIGN   L  LDL +N++ 
Sbjct: 132 LSLQYLNISENNLKSLPPEIGMLDKLQTLLVNKNSIRKLPTEIGNLRSLYELDLSNNQMD 191

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE-GCALSSLPDGLLSSLTSI 334
            +P+ L N+I L  LR+ +N+L    + L+    L E + +    +  LP   L SL ++
Sbjct: 192 LLPEELSNMIALKILRIGFNKLSGNIDVLTNFKFLVELDCQNNQGILELPP--LDSLQNL 249

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHN-QIDKIPYGIFSRAKNLSKVNMKDNLLT 393
             + +     T  P  G +    +  +N   N ++  +P  IF+ A +L +++     +T
Sbjct: 250 TRLVVKNLPITNIP--GLSSLKMLCELNVRDNIKMKGMPEEIFNIA-SLQRLDFVGCNIT 306

Query: 394 SLPLDLGTWVGLTELNLGTNQI--SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
            LP ++ +   L  L L  N +  S   E I  L N+  L +SNN +   P  + +L  +
Sbjct: 307 VLPPNITSLTNLNILELAHNSLNESSFPEGISTLTNISKLSISNNQIHSYPQCLCDLTSI 366

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
             LD+  N +  LP     L  +Q L +  N+L  LP ++G L +++YL    N L+S+P
Sbjct: 367 VELDVSNNLMVELPETFSNLTNVQNLTVAGNRLNRLPESLGRLISVTYLDARNNQLKSLP 426

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELA-LCSNLQIMSLDNCPLSQIPSEIVVGGPSLII 570
             IG L  L+ L L  N  +  +P E+  L   LQ + L N PL   P E+V+ G   I 
Sbjct: 427 ASIGDLRQLNRLELTQNM-IPVLPVEMGQLDGILQTIELTNNPLVVPPKEVVIKGAHEIC 485

Query: 571 RYLK 574
           +YLK
Sbjct: 486 KYLK 489



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 138/455 (30%), Positives = 226/455 (49%), Gaps = 36/455 (7%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL--TSL 162
           N + S++  T +P  V  + +LE L L  N++ S+P  I   +NL  L L +N+L    +
Sbjct: 42  NFNASQNDFTSIPEDVCLMPNLEVLTLSNNRITSIPDSIQKASNLRELYLGKNNLFYDGI 101

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
              +     L+ LD+  NKL  +P  +  L SL+ L +  N +K++ P+I  L  L  L 
Sbjct: 102 SSEIKMCSNLQRLDISMNKLESIPPEIGSLLSLQYLNISENNLKSLPPEIGMLDKLQTLL 161

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N IR+LP E+G L++L  LDL++N ++ LP+E+ N   L  L +  N+L    D+L 
Sbjct: 162 VNKNSIRKLPTEIGNLRSLYELDLSNNQMDLLPEELSNMIALKILRIGFNKLSGNIDVLT 221

Query: 283 N-----------------------LINLTRLRLSYNRLESVPETLSKCVHLNEFNV-EGC 318
           N                       L NLTRL +    + ++P  LS    L E NV +  
Sbjct: 222 NFKFLVELDCQNNQGILELPPLDSLQNLTRLVVKNLPITNIP-GLSSLKMLCELNVRDNI 280

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK--IPYGIF 376
            +  +P+ + + + S+  +       T  P    T  T++  +   HN +++   P GI 
Sbjct: 281 KMKGMPEEIFN-IASLQRLDFVGCNITVLPPN-ITSLTNLNILELAHNSLNESSFPEGI- 337

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
           S   N+SK+++ +N + S P  L     + EL++  N + +L E   NL N++ L ++ N
Sbjct: 338 STLTNISKLSISNNQIHSYPQCLCDLTSIVELDVSNNLMVELPETFSNLTNVQNLTVAGN 397

Query: 437 LLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
            L +LP S+G L  +  LD   N+L+SLP  IG L++L RL L  N +  LP  +G L  
Sbjct: 398 RLNRLPESLGRLISVTYLDARNNQLKSLPASIGDLRQLNRLELTQNMIPVLPVEMGQLDG 457

Query: 497 -LSYLSVGENNLQSIPEEIGTLENLHTL--YLNDN 528
            L  + +  N L   P+E+  ++  H +  YL DN
Sbjct: 458 ILQTIELTNNPLVVPPKEV-VIKGAHEICKYLKDN 491



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 207/408 (50%), Gaps = 39/408 (9%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           I  E   C   N+  LD+S + +  +PP +  L  L+ L +  N L SLP +IG +  L 
Sbjct: 101 ISSEIKMCS--NLQRLDISMNKLESIPPEIGSLLSLQYLNISENNLKSLPPEIGMLDKLQ 158

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L + +NS+  LP  + NL+ L  LDL +N+++ LP  +  + +LKIL + FN++     
Sbjct: 159 TLLVNKNSIRKLPTEIGNLRSLYELDLSNNQMDLLPEELSNMIALKILRIGFNKLSG--- 215

Query: 211 DIQYLSNLSMLSMRDNK----IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
           +I  L+N   L   D +    I ELPP L  L+NL  L + +  +  +P  + +  ML  
Sbjct: 216 NIDVLTNFKFLVELDCQNNQGILELPP-LDSLQNLTRLVVKNLPITNIPG-LSSLKMLCE 273

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           L+++ N                       +++ +PE +     L   +  GC ++ LP  
Sbjct: 274 LNVRDNI----------------------KMKGMPEEIFNIASLQRLDFVGCNITVLPPN 311

Query: 327 LLSSLTSINNITLSRNKF--TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
            ++SLT++N + L+ N    +++P G  T  T++  ++  +NQI   P        ++ +
Sbjct: 312 -ITSLTNLNILELAHNSLNESSFPEGIST-LTNISKLSISNNQIHSYPQ-CLCDLTSIVE 368

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
           +++ +NL+  LP        +  L +  N++++L E +  L+++  L   NN LK LP+S
Sbjct: 369 LDVSNNLMVELPETFSNLTNVQNLTVAGNRLNRLPESLGRLISVTYLDARNNQLKSLPAS 428

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKE-LQRLILQSNQLVSLPRAI 491
           IG+LR+L  L+L +N +  LP E+G L   LQ + L +N LV  P+ +
Sbjct: 429 IGDLRQLNRLELTQNMIPVLPVEMGQLDGILQTIELTNNPLVVPPKEV 476


>gi|359321003|ref|XP_003639483.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1 [Canis lupus familiaris]
          Length = 524

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 193/386 (50%), Gaps = 28/386 (7%)

Query: 174 VLDLRHNKLNELPMVVYKLTS-LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
            +D RH  L  +P  +Y+    L+ L L  N+++ +      L  L  L + DN+I+ LP
Sbjct: 16  TIDKRHCSLVYVPEEIYRYXRFLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLP 75

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
           PE+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT L +
Sbjct: 76  PEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSV 135

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           +   L+S+PE +    +L    +    L+ LPD L                         
Sbjct: 136 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSL------------------------- 170

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
           TQ   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L++  
Sbjct: 171 TQLRRLEELDLGNNEIYNLPESIGALL-HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSE 229

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L +++N+L  LP  +G  +
Sbjct: 230 NRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCE 289

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            L  L+L  NQL++LP++IG L  LS L+   N L S+P+EIG   +L    + DN  L 
Sbjct: 290 SLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNR-LT 348

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIP 558
            +P E++  + L ++ +    L  +P
Sbjct: 349 RLPAEVSQATELHVLDVAGNRLLHLP 374



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 134/424 (31%), Positives = 201/424 (47%), Gaps = 51/424 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LGL++N +  LP 
Sbjct: 17  IDKRHCSLVYVPEEIYRYXRFLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPP 76

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            +AN  QL  LD+  N + E+P  +    +L+I     N +  +      L NL+ LS+ 
Sbjct: 77  EIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVN 136

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           D  ++ LP  +G L NL +L+L  N L  LP  +     L  LDL +NE+ N+P+ +G L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
           ++L  L L  N+L  +P+ +    +L   +V    L  LP+ + S LTS+ ++ +S+   
Sbjct: 197 LHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI-SGLTSLTDLVISQ--- 252

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
                                N ++ IP GI  + K LS + +  N LT LP  +G    
Sbjct: 253 ---------------------NLLEMIPDGI-GKLKKLSILKVDQNRLTQLPEAVGDCES 290

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LTEL                       VL+ N L  LP SIG L+KL  L+ + NKL SL
Sbjct: 291 LTEL-----------------------VLTENQLLTLPKSIGKLKKLSNLNADRNKLVSL 327

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P EIG    L    ++ N+L  LP  +   T L  L V  N L  +P  +  L+ L  L+
Sbjct: 328 PKEIGGCCSLTVFCVRDNRLTRLPAEVSQATELHVLDVAGNRLLHLPLSLTALK-LKALW 386

Query: 525 LNDN 528
           L+DN
Sbjct: 387 LSDN 390



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/314 (35%), Positives = 165/314 (52%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 84  LVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 204 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE +  C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 264 KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKS-IGKLKKLSNLNADRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ ++P  + S+A  L  +++  N L  LPL L 
Sbjct: 323 KLVSLPKEIGGCCSLT-VFCV--RDNRLTRLPAEV-SQATELHVLDVAGNRLLHLPLSL- 377

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 378 TALKLKALWLSDNQ 391



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 163/342 (47%), Gaps = 56/342 (16%)

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           L  N L ELP++      L  L L  NE+  +P  + N + L  L +S N +  +PE++S
Sbjct: 43  LDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIS 102

Query: 306 KCVHLNEFNVEGCALSSLPDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQFTSVYSI 361
            C  L   +  G  L+ LP+    L +LT  S+N+I+L            P    ++Y  
Sbjct: 103 FCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQ---------SLPENIGNLY-- 151

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
                              NL+ + +++NLLT LP  L     L EL+LG N+I  L E 
Sbjct: 152 -------------------NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES 192

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           I  L++L+ L L  N L +LP  IGNL+ L CLD+ EN+LE LP EI  L  L  L++  
Sbjct: 193 IGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQ 252

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN--------- 532
           N L  +P  IG L  LS L V +N L  +PE +G  E+L  L L +N  L          
Sbjct: 253 NLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLK 312

Query: 533 -------------NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                        ++P E+  C +L +  + +  L+++P+E+
Sbjct: 313 KLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRLPAEV 354



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 124/223 (55%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +L+L ++ +T+LP S+ +L  LEEL L  N++ +LP  IG + +L  L L  N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + NL+ L  LD+  N+L  LP  +  LTSL  L +  N ++ +   I  L  LS+L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSIL 271

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++ +LP  +G+ ++L  L L  N L  LPK IG    L  L+   N+LV++P  +
Sbjct: 272 KVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 331

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
           G   +LT   +  NRL  +P  +S+   L+  +V G  L  LP
Sbjct: 332 GGCCSLTVFCVRDNRLTRLPAEVSQATELHVLDVAGNRLLHLP 374



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 1/104 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E++  L L+++ +  LP S+ KL  L  L    NKL SLP +IG   +LT   + +N LT
Sbjct: 289 ESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLT 348

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR 204
            LP  ++   +L VLD+  N+L  LP+ +  L  LK L+L  N+
Sbjct: 349 RLPAEVSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDNQ 391


>gi|71991525|ref|NP_001023850.1| Protein LET-413, isoform a [Caenorhabditis elegans]
 gi|7899272|emb|CAB91651.1| LET-413 protein [Caenorhabditis elegans]
 gi|351062134|emb|CCD70053.1| Protein LET-413, isoform a [Caenorhabditis elegans]
          Length = 679

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/383 (32%), Positives = 189/383 (49%), Gaps = 26/383 (6%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +L+L+ ++I  L   +  L HL  L +  N+LA LP++IG +T L  L L  NS+  LPD
Sbjct: 40  DLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPAEIGNLTQLIELNLNRNSIAKLPD 99

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
           ++ N + L  L+L  N    LP  + + +S+ IL L    +  +  +I  L+NL +L  R
Sbjct: 100 TMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSLTLLPSNIGSLTNLRVLEAR 159

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           DN +R +P  + EL+ L  LDL  N LE LP EIG  T L    +  N L ++PD +   
Sbjct: 160 DNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGC 219

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             L +L +S N++  +PE L +  +L + N+    +  LP      L  +  +   RN  
Sbjct: 220 RMLDQLDVSENQIIRLPENLGRMPNLTDLNISINEIIELPSS-FGELKRLQMLKADRNSL 278

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
                               HN   +I      + ++L+++ +  N LT LP  +G    
Sbjct: 279 --------------------HNLTSEI-----GKCQSLTELYLGQNFLTDLPDTIGDLRQ 313

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LT LN+  N +S + + I N  +L VL L  N+L +LP +IG    L  LD+  NKL  L
Sbjct: 314 LTTLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVLDVASNKLPHL 373

Query: 465 PNEIGFLKELQRLILQSNQLVSL 487
           P  +  L +LQ L L  NQ  S+
Sbjct: 374 PFTVKVLYKLQALWLSENQTQSI 396



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 185/359 (51%), Gaps = 4/359 (1%)

Query: 205 IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTML 264
           ++ +  DI     L  L++  N I+EL   L  L++L  LD++ N L  LP EIGN T L
Sbjct: 25  LQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPAEIGNLTQL 84

Query: 265 VTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
           + L+L  N +  +PD + N   LT L LS N    +PET+ +C  +   ++   +L+ LP
Sbjct: 85  IELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSLTLLP 144

Query: 325 DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
             +  SLT++  +    N     P     +   +  ++   N+++ +P  I  +  +L +
Sbjct: 145 SNI-GSLTNLRVLEARDNLLRTIPLS-IVELRKLEELDLGQNELEALPAEI-GKLTSLRE 201

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
             +  N LTSLP  +     L +L++  NQI +L E++  + NL  L +S N + +LPSS
Sbjct: 202 FYVDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENLGRMPNLTDLNISINEIIELPSS 261

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
            G L++L+ L  + N L +L +EIG  + L  L L  N L  LP  IG L  L+ L+V  
Sbjct: 262 FGELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDC 321

Query: 505 NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVV 563
           NNL  IP+ IG  ++L  L L  N  L  +P  +  C NL ++ + +  L  +P  + V
Sbjct: 322 NNLSDIPDTIGNCKSLTVLSLRQNI-LTELPMTIGKCENLTVLDVASNKLPHLPFTVKV 379



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 183/393 (46%), Gaps = 26/393 (6%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L ++PS I     L  L L  N++  L   L +L+ LR+LD+  N+L  LP  +  LT L
Sbjct: 25  LQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPAEIGNLTQL 84

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
             L L  N I  +   +Q    L+ L++  N    LP  + E  ++  L L    L  LP
Sbjct: 85  IELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSLTLLP 144

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
             IG+ T L  L+ + N L  IP  +  L  L  L L  N LE++P  + K   L EF V
Sbjct: 145 SNIGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFYV 204

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
           +  +L+SLPD       SI+   +                  +  ++   NQI ++P  +
Sbjct: 205 DINSLTSLPD-------SISGCRM------------------LDQLDVSENQIIRLPENL 239

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             R  NL+ +N+  N +  LP   G    L  L    N +  L+ +I    +L  L L  
Sbjct: 240 -GRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQ 298

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N L  LP +IG+LR+L  L+++ N L  +P+ IG  K L  L L+ N L  LP  IG   
Sbjct: 299 NFLTDLPDTIGDLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTIGKCE 358

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           NL+ L V  N L  +P  +  L  L  L+L++N
Sbjct: 359 NLTVLDVASNKLPHLPFTVKVLYKLQALWLSEN 391



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 152/330 (46%), Gaps = 29/330 (8%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS +  T LP ++ + + +  L L    L  LPS IG +TNL  L   +N L ++P S
Sbjct: 110 LNLSSNPFTRLPETICECSSITILSLNETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLS 169

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L++L  LDL  N+L  LP  + KLTSL+  Y+  N + ++   I     L  L + +
Sbjct: 170 IVELRKLEELDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRMLDQLDVSE 229

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I  LP  LG + NL  L+++ N + ELP   G    L  L    N L N+   +G   
Sbjct: 230 NQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNSLHNLTSEIGKCQ 289

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +LT L L  N L  +P+T+     L   NV+   LS +PD  + +  S+  ++L +N  T
Sbjct: 290 SLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLSDIPD-TIGNCKSLTVLSLRQNILT 348

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                             + +NL+ +++  N L  LP  +     L
Sbjct: 349 ELPM-------------------------TIGKCENLTVLDVASNKLPHLPFTVKVLYKL 383

Query: 406 TELNLGTNQ---ISKLSEDIQNLVNLEVLV 432
             L L  NQ   I KLSE   +   ++V+ 
Sbjct: 384 QALWLSENQTQSILKLSETRDDRKGIKVVT 413



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 8/271 (2%)

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--G 350
           S + L+++P  + +   L + N+    +  L D  L SL  +  + +S N+    P+  G
Sbjct: 21  SQSNLQAIPSDIFRFRKLEDLNLTMNNIKEL-DHRLFSLRHLRILDVSDNELAVLPAEIG 79

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
             TQ   +  +N   N I K+P       K L+ +N+  N  T LP  +     +T L+L
Sbjct: 80  NLTQ---LIELNLNRNSIAKLP-DTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSL 135

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
               ++ L  +I +L NL VL   +NLL+ +P SI  LRKL+ LDL +N+LE+LP EIG 
Sbjct: 136 NETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGK 195

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+   +  N L SLP +I     L  L V EN +  +PE +G + NL  L ++ N  
Sbjct: 196 LTSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENLGRMPNLTDLNISINEI 255

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +  +P        LQ++  D   L  + SEI
Sbjct: 256 I-ELPSSFGELKRLQMLKADRNSLHNLTSEI 285



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 95/182 (52%), Gaps = 1/182 (0%)

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           + +  ++   + L ++P D+  +  L +LNL  N I +L   + +L +L +L +S+N L 
Sbjct: 13  RQVDSIDRSQSNLQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELA 72

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
            LP+ IGNL +L  L+L  N +  LP+ +   K L  L L SN    LP  I   ++++ 
Sbjct: 73  VLPAEIGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITI 132

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPS 559
           LS+ E +L  +P  IG+L NL  L   DN  L  IP  +     L+ + L    L  +P+
Sbjct: 133 LSLNETSLTLLPSNIGSLTNLRVLEARDN-LLRTIPLSIVELRKLEELDLGQNELEALPA 191

Query: 560 EI 561
           EI
Sbjct: 192 EI 193



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 121/278 (43%), Gaps = 50/278 (17%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +L++S + I  LP S  +L  L+ L    N L +L S+IG   +LT L L +N LT 
Sbjct: 244 NLTDLNISINEIIELPSSFGELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQNFLTD 303

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LPD++ +L+QL  L++  N L+++P  +    SL +                       L
Sbjct: 304 LPDTIGDLRQLTTLNVDCNNLSDIPDTIGNCKSLTV-----------------------L 340

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           S+R N + ELP  +G+ +NL  LD+A N L  LP  +     L  L L  N+  +I    
Sbjct: 341 SLRQNILTELPMTIGKCENLTVLDVASNKLPHLPFTVKVLYKLQALWLSENQTQSI---- 396

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
                   L+LS  R +     +  C  L + +          DG   S ++ +N    R
Sbjct: 397 --------LKLSETRDDRKGIKVVTCYLLPQVDA--------IDGEGRSGSAQHNT--DR 438

Query: 342 NKFTAYPSGGP-TQFTSVYSINFEHNQIDKIPYGIFSR 378
             F     GGP   F       FE N+  +I  G F R
Sbjct: 439 GAFL----GGPKVHFHDQADTTFEENKEAEIHLGNFER 472


>gi|372273437|ref|NP_001243220.1| scribbled homolog [Xenopus (Silurana) tropicalis]
 gi|355895400|gb|AET07148.1| scribbled short isoform [Xenopus (Silurana) tropicalis]
          Length = 976

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 206/417 (49%), Gaps = 29/417 (6%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++ ++D    S+  +P  + + +  LEEL L  N+L  LP     + NL  LG
Sbjct: 7   LWRCNR-HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N + E+P  +    SL+I     N +  +     
Sbjct: 66  LSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSRLPDGFT 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L +L+ L++ D  ++ LP ++G L NLVTL+L  N L+ +P  +     L  LDL  N+
Sbjct: 126 QLRSLAHLALNDVSLQSLPSDIGNLSNLVTLELRENVLKSVPMSLSFLVKLEQLDLGSND 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L  +PD LG L NL  L L  N+L S+P  L     L   +V    L  LP   +S L S
Sbjct: 186 LQVLPDTLGALPNLRELWLDRNQLSSLPSELGNLRRLVCLDVSENKLEQLP-AEISGLMS 244

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ LS+N+ ++ PS    Q   +  +  + N++ ++   I    +NLS++ + +NLLT
Sbjct: 245 LTDLLLSQNQLSSLPS-SLGQLKQLSILKVDQNRLTQLTESI-GDCENLSEIILTENLLT 302

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            LP  +G    LT LN+  N+                       L  LPS IG    L  
Sbjct: 303 VLPKSMGNLTKLTNLNVDRNR-----------------------LLSLPSEIGGCASLNV 339

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L L +N+L +LP E+    EL  L +  N+L++LP A+ +L NL  L + EN  Q +
Sbjct: 340 LSLRDNQLSALPPELAGATELHVLDVAGNRLLNLPFALTNL-NLKALWLAENQSQPM 395



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 185/415 (44%), Gaps = 93/415 (22%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR 229
           + +  +D RH  L  +P  +Y+                      Y  +L  L +  N++R
Sbjct: 12  RHVESVDKRHCSLQAVPEEIYR----------------------YSRSLEELLLDANQLR 49

Query: 230 ELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTR 289
           ELP     L NL  L L+ N ++ LP E+ N   LV LD+  N   +IP+          
Sbjct: 50  ELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDISRN---DIPE---------- 96

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS 349
                     +PE++  C  L   +  G  LS LPDG                       
Sbjct: 97  ----------IPESIKFCKSLEIADFSGNPLSRLPDGF---------------------- 124

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
              TQ  S+  +      +  +P  I     NL  + +++N+L S+P+ L   V L +L+
Sbjct: 125 ---TQLRSLAHLALNDVSLQSLPSDI-GNLSNLVTLELRENVLKSVPMSLSFLVKLEQLD 180

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           LG+N +  L + +  L NL  L L  N L  LPS +GNLR+L CLD+ ENKLE LP EI 
Sbjct: 181 LGSNDLQVLPDTLGALPNLRELWLDRNQLSSLPSELGNLRRLVCLDVSENKLEQLPAEIS 240

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN- 528
            L  L  L+L  NQL SLP ++G L  LS L V +N L  + E IG  ENL  + L +N 
Sbjct: 241 GLMSLTDLLLSQNQLSSLPSSLGQLKQLSILKVDQNRLTQLTESIGDCENLSEIILTENL 300

Query: 529 --------------TCLN-------NIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
                         T LN       ++P E+  C++L ++SL +  LS +P E+ 
Sbjct: 301 LTVLPKSMGNLTKLTNLNVDRNRLLSLPSEIGGCASLNVLSLRDNQLSALPPELA 355


>gi|403257784|ref|XP_003921474.1| PREDICTED: leucine-rich repeat-containing protein 7 [Saimiri
           boliviensis boliviensis]
          Length = 1537

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 193/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 24  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSN 83

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 144 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 201

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 202 ------------------------VLDQIQNLRELWMDNNALQILPGSIGKLKMLVYLDM 237

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 238 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGN 297

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 298 LSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 356

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 357 LEFLPEEIGQMQKLRVLNLSDNRLKNLP 384



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 202/443 (45%), Gaps = 50/443 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q            
Sbjct: 17  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQ------------ 64

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q LR L +  N L+ LP  +  L +LK L +  N ++    +I+ 
Sbjct: 65  -----------LFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKC 113

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G    L  L+L+ N L
Sbjct: 114 CKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHL 173

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    +PE L +  +L E  ++  AL  LP G +  L  +
Sbjct: 174 KTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQILP-GSIGKLKML 232

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N+              + +++ +            S  + L  + +  N+L  
Sbjct: 233 VYLDMSKNR--------------IETVDMD-----------ISGCEALEDLLLSSNMLQQ 267

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    LT L +  NQ++ L   I NL  LE    S N L+ LPS+IG L  L+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 327

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            ++EN L  LP EIG  K +  + L+SN+L  LP  IG +  L  L++ +N L+++P   
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 387

Query: 515 GTLENLHTLYLNDNTCLNNIPFE 537
             L+ L  L+L+DN     IP +
Sbjct: 388 TKLKELAALWLSDNQSKALIPLQ 410



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 180/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 93  NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 152

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 153 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLREL 212

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 213 WMDNNALQILPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 272

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 273 GLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPS---------------- 316

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                             +I + H               +L  + + +N L  LP ++G+
Sbjct: 317 ------------------TIGYLH---------------SLRTLAVDENFLPELPREIGS 343

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 344 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 403

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 404 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 433


>gi|418727702|ref|ZP_13286290.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959060|gb|EKO22837.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 378

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/335 (32%), Positives = 179/335 (53%), Gaps = 26/335 (7%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
            +++L L   ++K +   I  L NL ML++ DN++  LP E+ +LKNL  L L +N  + 
Sbjct: 48  DVRVLILSEQKLKALPEKIGQLKNLQMLNLSDNQLIILPKEIRQLKNLQELFLNYNQFKT 107

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
            PKEI     L  L L +N+L  +P  +G L NL  L L  N+L+++ + + +  +L + 
Sbjct: 108 FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKL 167

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
            ++   L++ P  +   L ++ ++ LS N+ T +P                         
Sbjct: 168 YLDNNQLTAFPKEI-GKLQNLKSLFLSNNQLTTFPKE----------------------- 203

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
               + +NL ++ + +N LT+ P ++G    L  L LG NQ++ +  +I  L  L+ L L
Sbjct: 204 --IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNL 261

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
             N L  +P  IG L+ L+ L L  N+ +++P E G LK L+ L L +NQL +LP+ IG 
Sbjct: 262 DVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGK 321

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L NL  L++  N L +IP+EIG L+NL TLYL +N
Sbjct: 322 LKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNN 356



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/319 (34%), Positives = 170/319 (53%), Gaps = 27/319 (8%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            L L+   L+ LP++IG    L  L+L  N+L+ +P  +  L NL  L L+YN+ ++ P+
Sbjct: 51  VLILSEQKLKALPEKIGQLKNLQMLNLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPK 110

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + +                        L S++ + LS N+ T  P     Q  ++  +N
Sbjct: 111 EIEQ------------------------LKSLHKLYLSNNQLTILPVE-IGQLQNLQELN 145

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQ+  I   I  + KNL K+ + +N LT+ P ++G    L  L L  NQ++   ++I
Sbjct: 146 LWNNQLKTISKEI-EQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEI 204

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NL+ L LSNN L   P  IG L+KL+ L L +N+L ++PNEIG L++LQ L L  N
Sbjct: 205 GKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVN 264

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL ++P+ IG L NL  L +  N  ++IP E G L+NL  L L+ N  L  +P E+    
Sbjct: 265 QLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQ-LTALPKEIGKLK 323

Query: 543 NLQIMSLDNCPLSQIPSEI 561
           NL++++LD   L  IP EI
Sbjct: 324 NLKMLNLDANQLITIPKEI 342



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 180/337 (53%), Gaps = 26/337 (7%)

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
           ++  L L+E  L +LP+ +  L+ L++L+L  N+L  LP  + +L +L+ L+L +N+ KT
Sbjct: 48  DVRVLILSEQKLKALPEKIGQLKNLQMLNLSDNQLIILPKEIRQLKNLQELFLNYNQFKT 107

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
              +I+ L +L  L + +N++  LP E+G+L+NL  L+L +N L+ + KEI     L  L
Sbjct: 108 FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKL 167

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
            L +N+L   P  +G L NL  L LS N+L + P+ + K  +L E  +    L++ P  +
Sbjct: 168 YLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI 227

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
              L  +  + L  N+ T  P                 N+I K+        + L ++N+
Sbjct: 228 -GKLQKLQWLGLGDNQLTTIP-----------------NEIGKL--------QKLQELNL 261

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
             N LT++P ++G    L  L L  NQ   +  +   L NL++L L  N L  LP  IG 
Sbjct: 262 DVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGK 321

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           L+ LK L+L+ N+L ++P EIG L+ LQ L L++NQ 
Sbjct: 322 LKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQF 358



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 166/311 (53%), Gaps = 3/311 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS+  +  LP  + +L +L+ L L  N+L  LP +I  + NL  L L  N   + P  
Sbjct: 52  LILSEQKLKALPEKIGQLKNLQMLNLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKE 111

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L  L L +N+L  LP+ + +L +L+ L L  N++KT+  +I+ L NL  L + +
Sbjct: 112 IEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDN 171

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++   P E+G+L+NL +L L++N L   PKEIG    L  L L +N+L   P  +G L 
Sbjct: 172 NQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQ 231

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L  N+L ++P  + K   L E N++   L+++P  +   L ++  + LS N+F 
Sbjct: 232 KLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEI-GQLQNLQVLFLSYNQFK 290

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++  ++ + NQ+  +P  I  + KNL  +N+  N L ++P ++G    L
Sbjct: 291 TIPVEF-GQLKNLKMLSLDANQLTALPKEI-GKLKNLKMLNLDANQLITIPKEIGQLQNL 348

Query: 406 TELNLGTNQIS 416
             L L  NQ S
Sbjct: 349 QTLYLRNNQFS 359



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 113/176 (64%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+ +L LS + +T  P  + KL +L+ELYL  N+L + P +IG +  L  LGL +N 
Sbjct: 183 KLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQ 242

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT++P+ +  LQ+L+ L+L  N+L  +P  + +L +L++L+L +N+ KT+  +   L NL
Sbjct: 243 LTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNL 302

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
            MLS+  N++  LP E+G+LKNL  L+L  N L  +PKEIG    L TL L++N+ 
Sbjct: 303 KMLSLDANQLTALPKEIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQF 358



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 131/249 (52%), Gaps = 1/249 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L+ +     P  +E+L  L +LYL  N+L  LP +IG + NL  L L  N L 
Sbjct: 93  KNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLK 152

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++   +  L+ L+ L L +N+L   P  + KL +LK L+L  N++ T   +I  L NL  
Sbjct: 153 TISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQE 212

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++   P E+G+L+ L  L L  N L  +P EIG    L  L+L  N+L  IP  
Sbjct: 213 LYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKE 272

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LSYN+ +++P    +  +L   +++   L++LP   +  L ++  + L 
Sbjct: 273 IGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE-IGKLKNLKMLNLD 331

Query: 341 RNKFTAYPS 349
            N+    P 
Sbjct: 332 ANQLITIPK 340



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 82/144 (56%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L++  QN +++ VL+LS   LK LP  IG L+ L+ L+L +N+L  LP EI  LK LQ L
Sbjct: 39  LTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLNLSDNQLIILPKEIRQLKNLQEL 98

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L  NQ  + P+ I  L +L  L +  N L  +P EIG L+NL  L L +N  L  I  E
Sbjct: 99  FLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQ-LKTISKE 157

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    NLQ + LDN  L+  P EI
Sbjct: 158 IEQLKNLQKLYLDNNQLTAFPKEI 181



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 71/123 (57%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  +  N   ++ L L E KL++LP +IG LK LQ L L  NQL+ LP+ I  L NL 
Sbjct: 37  RDLTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLNLSDNQLIILPKEIRQLKNLQ 96

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N  ++ P+EI  L++LH LYL++N  L  +P E+    NLQ ++L N  L  I 
Sbjct: 97  ELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQ-LTILPVEIGQLQNLQELNLWNNQLKTIS 155

Query: 559 SEI 561
            EI
Sbjct: 156 KEI 158


>gi|74200782|dbj|BAE24769.1| unnamed protein product [Mus musculus]
          Length = 469

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 193/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 29  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSS 88

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 89  LPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 148

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 149 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 206

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 207 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 242

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 243 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 302

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 303 LSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 361

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 362 LEFLPEEIGQMQRLRVLNLSDNRLKNLP 389



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 195/416 (46%), Gaps = 27/416 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 22  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSI 81

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L+SLP S+A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 82  PDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 141

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 142 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 201

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+ +P ++ K   L   ++    + ++ D  +S   ++
Sbjct: 202 SELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETV-DMDISGCEAL 260

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                         G+    K L+ + + DN LT 
Sbjct: 261 EDLLLSSNMLQQLPDS----------------------IGLL---KKLTTLKVDDNQLTM 295

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    L E +   N++  L   I  L +L  L +  N L +LP  IG+ + +  +
Sbjct: 296 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 355

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
            L  NKLE LP EIG ++ L+ L L  N+L +LP +   L  L+ L + +N  +++
Sbjct: 356 SLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 411



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 70/128 (54%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L +  + +T LP ++  L+ LEE     N+L SLP  IGY+ +L  L + EN L  LP  
Sbjct: 286 LKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPRE 345

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + + + + V+ LR NKL  LP  + ++  L++L L  NR+K +      L  L+ L + D
Sbjct: 346 IGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSD 405

Query: 226 NKIRELPP 233
           N+ + L P
Sbjct: 406 NQSKALIP 413


>gi|417760636|ref|ZP_12408653.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417773199|ref|ZP_12421083.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|417784393|ref|ZP_12432099.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|418673942|ref|ZP_13235253.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943556|gb|EKN89156.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409952210|gb|EKO06723.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|410577040|gb|EKQ40038.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579220|gb|EKQ47070.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 423

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/358 (36%), Positives = 192/358 (53%), Gaps = 4/358 (1%)

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L L F  +KT+   I  L NL  L +  N+   L  E+ +LK+L  L+L +N L  LPKE
Sbjct: 46  LDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKE 105

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           IG    L  L L  NELVN+P  +G   NL +L L  N+L  +P+ + +  +L E ++  
Sbjct: 106 IGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLS 165

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             L SLP  +   L S+ N+ L+ N+FT   S       ++ +++   N++  IP  I  
Sbjct: 166 NKLISLPTEI-EQLKSLKNLDLNNNEFTTV-SKEVMLLETLENLDLRSNKLKTIPKEI-R 222

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           + K+L  + +  N LTSLP ++     L  LNLG N+      +I  L NL  L L  N 
Sbjct: 223 QLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQ 282

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L + P  +G L+ LK L L  N++ +LP E+  L +LQ L L  N++  LP+ I  L NL
Sbjct: 283 LVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNL 342

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            +LS+  N L ++P+EIG L+ L  L L +N  L  +P E+    NLQ + LD+ P+S
Sbjct: 343 EWLSLSNNKLNALPKEIGQLKKLQRLELGNNQ-LTTLPKEIEQLKNLQRLELDSNPIS 399



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/381 (33%), Positives = 199/381 (52%), Gaps = 26/381 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++ NLDLS   +  LP  + +L +L++L L GN+   L  +I  + +L  L L  N LT 
Sbjct: 42  DVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTV 101

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  LQ L+ L L  N+L  LP  + +  +L+ L L  N++  +  +I  L NL  L
Sbjct: 102 LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQEL 161

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           S+  NK+  LP E+ +LK+L  LDL +N    + KE+     L  LDL+ N+L  IP  +
Sbjct: 162 SLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEI 221

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L +L  L L+ N+L S+P+ + +  +L   N                        L  
Sbjct: 222 RQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLN------------------------LGE 257

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P         +    + +NQ+ + P  +  + K+L  +++  N +T+LP+++  
Sbjct: 258 NRFQIFPVEILELKNLLELNLY-YNQLVEFPKEV-GQLKSLKYLSLYHNQITTLPVEVTQ 315

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L EL+L  N+I+ L ++I  L NLE L LSNN L  LP  IG L+KL+ L+L  N+L
Sbjct: 316 LPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQL 375

Query: 462 ESLPNEIGFLKELQRLILQSN 482
            +LP EI  LK LQRL L SN
Sbjct: 376 TTLPKEIEQLKNLQRLELDSN 396



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 190/370 (51%), Gaps = 26/370 (7%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L +LP++IG + NL  L L  N  T L   +  L+ L+ L+L +NKL  LP  + +L +L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           + L L  N +  +  +I    NL  L++ +NK+  LP E+G+L+NL  L L  N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
            EI     L  LDL +NE   +   +  L  L  L L  N+L+++P+ + +   L    +
Sbjct: 173 TEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
            G  L+SLP  +   L ++  + L  N+F  +P         +    + +NQ+ + P  +
Sbjct: 233 TGNQLTSLPKEI-EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY-YNQLVEFPKEV 290

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             + K+L  +++  N +T+LP+++     L EL+L  N+I+ L ++I  L NLE L LSN
Sbjct: 291 -GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSN 349

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N                       KL +LP EIG LK+LQRL L +NQL +LP+ I  L 
Sbjct: 350 N-----------------------KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK 386

Query: 496 NLSYLSVGEN 505
           NL  L +  N
Sbjct: 387 NLQRLELDSN 396



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 187/360 (51%), Gaps = 8/360 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  +  T L   + +L  L++L L  NKL  LP +IG + NL  L L  N L 
Sbjct: 64  KNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELV 123

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +   + L+ L+L +NKL  LP  + +L +L+ L L  N++ ++  +I+ L +L  
Sbjct: 124 NLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKN 183

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N+   +  E+  L+ L  LDL  N L+ +PKEI     L  L L  N+L ++P  
Sbjct: 184 LDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKE 243

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  NR +  P  + +  +L E N+    L   P   +  L S+  ++L 
Sbjct: 244 IEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKE-VGQLKSLKYLSLY 302

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P    TQ   +  ++   N+I  +P  I  + KNL  +++ +N L +LP ++G
Sbjct: 303 HNQITTLPV-EVTQLPDLQELHLSGNKITILPKEIL-QLKNLEWLSLSNNKLNALPKEIG 360

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL--KC-LDLE 457
               L  L LG NQ++ L ++I+ L NL+ L L +N +   P     +RKL  KC +D E
Sbjct: 361 QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKLLPKCEIDFE 418



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 184/356 (51%), Gaps = 27/356 (7%)

Query: 206 KTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
           K +   +Q  +++  L +    ++ LP ++G+LKNL  LDL  N    L KEI     L 
Sbjct: 31  KNLEKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
            L+L +N+L  +P  +G L NL  L L  N L ++P+ + +  +L + N++   L+ LP 
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPK 150

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
            +   L ++  ++L  NK  + P+                            + K+L  +
Sbjct: 151 EI-GQLQNLQELSLLSNKLISLPTE-------------------------IEQLKSLKNL 184

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           ++ +N  T++  ++     L  L+L +N++  + ++I+ L +L+VL+L+ N L  LP  I
Sbjct: 185 DLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
             L+ LK L+L EN+ +  P EI  LK L  L L  NQLV  P+ +G L +L YLS+  N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 506 NLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            + ++P E+  L +L  L+L+ N  +  +P E+    NL+ +SL N  L+ +P EI
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGNK-ITILPKEILQLKNLEWLSLSNNKLNALPKEI 359



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 147/261 (56%), Gaps = 3/261 (1%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           +N+ KE  + K  N+  L+L  + +T LP  + +L +L+EL L  NKL SLP++I  + +
Sbjct: 123 VNLPKEIGQFK--NLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKS 180

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L L  N  T++   +  L+ L  LDLR NKL  +P  + +L SLK+L L  N++ ++
Sbjct: 181 LKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSL 240

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
             +I+ L NL  L++ +N+ +  P E+ ELKNL+ L+L +N L E PKE+G    L  L 
Sbjct: 241 PKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLS 300

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
           L HN++  +P  +  L +L  L LS N++  +P+ + +  +L   ++    L++LP   +
Sbjct: 301 LYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKE-I 359

Query: 329 SSLTSINNITLSRNKFTAYPS 349
             L  +  + L  N+ T  P 
Sbjct: 360 GQLKKLQRLELGNNQLTTLPK 380



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 156/310 (50%), Gaps = 27/310 (8%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           N+   L N  ++  L LS+  L+++P  + +  +L + ++ G   + L   +   L  + 
Sbjct: 32  NLEKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQ-LKDLQ 90

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + L+ NK T  P     Q  ++  ++   N++  +P  I  + KNL K+N+ +N LT L
Sbjct: 91  KLNLNNNKLTVLPKE-IGQLQNLQELSLHSNELVNLPKEI-GQFKNLQKLNLDNNKLTVL 148

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L EL+L +N++  L  +I+ L +L+ L L+NN    +   +  L  L+ LD
Sbjct: 149 PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLD 208

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ------- 508
           L  NKL+++P EI  LK L+ L+L  NQL SLP+ I  L NL  L++GEN  Q       
Sbjct: 209 LRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEIL 268

Query: 509 ----------------SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                             P+E+G L++L  L L  N  +  +P E+    +LQ + L   
Sbjct: 269 ELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ-ITTLPVEVTQLPDLQELHLSGN 327

Query: 553 PLSQIPSEIV 562
            ++ +P EI+
Sbjct: 328 KITILPKEIL 337



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 120/243 (49%), Gaps = 32/243 (13%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           NLDL+ +  T +   V  L  LE L L  NKL ++P +I  + +L  L L  N LTSLP 
Sbjct: 183 NLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPK 242

Query: 165 SLANLQQLRVLDL-----------------------RHNKLNELPMVVYKLTSLKILYLR 201
            +  LQ L+ L+L                        +N+L E P  V +L SLK L L 
Sbjct: 243 EIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLY 302

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N+I T+  ++  L +L  L +  NKI  LP E+ +LKNL  L L++N L  LPKEIG  
Sbjct: 303 HNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL-----ESVPETLSKCVHLNEFNVE 316
             L  L+L +N+L  +P  +  L NL RL L  N +     E + + L KC    E + E
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISPKEKERIRKLLPKC----EIDFE 418

Query: 317 GCA 319
           G  
Sbjct: 419 GGG 421


>gi|426215730|ref|XP_004002122.1| PREDICTED: leucine-rich repeat-containing protein 7 [Ovis aries]
          Length = 1537

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 192/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 24  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALKKLSIPDNDLSN 83

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    +   L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 144 YLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 201

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 202 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 238 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 297

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 298 LSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 356

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 357 LEFLPEEIGQMQKLRVLNLSDNRLKNLP 384



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 198/416 (47%), Gaps = 27/416 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 17  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALKKLSI 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L++LP ++A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 77  PDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 136

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 196

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+ +P ++ K   L   ++    + ++ D  +S   ++
Sbjct: 197 SELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETV-DMDISGCEAL 255

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                    D I  G+    K L+ + + DN LT 
Sbjct: 256 EDLLLSSNMLQQLP--------------------DSI--GLL---KKLTTLKVDDNQLTM 290

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    L E +   N++  L   I  L +L  L +  N L +LP  IG+ + +  +
Sbjct: 291 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
            L  NKLE LP EIG +++L+ L L  N+L +LP +   L  L+ L + +N  +++
Sbjct: 351 SLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 180/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 93  NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 152

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 153 LPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLREL 212

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 213 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 272

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 273 GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS---------------- 316

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                             +I + H               +L  + + +N L  LP ++G+
Sbjct: 317 ------------------TIGYLH---------------SLRTLAVDENFLPELPREIGS 343

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 344 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 403

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 404 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 433



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 183/402 (45%), Gaps = 61/402 (15%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + K+   C+   +  L +  + +++LP ++  L +L+EL +  N +   P  I     LT
Sbjct: 61  LPKQLFNCQA--LKKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 118

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            +  + N ++ LPD    L  L  L L    L  LP    +L  L+IL LR N +KT+  
Sbjct: 119 IIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPK 178

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
            +  L+ L  L + +N+  ELP  L +++NL  L + +N L+ LP  IG   MLV LD  
Sbjct: 179 SMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD-- 236

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLL 328
                                +S NR+E+V   +S C  L +  +    L  LPD  GLL
Sbjct: 237 ---------------------MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLL 275

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
             LT                           ++  + NQ+  +P  I     NLS +   
Sbjct: 276 KKLT---------------------------TLKVDDNQLTMLPNTI----GNLSLLEEF 304

Query: 389 D---NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           D   N L SLP  +G    L  L +  N + +L  +I +  N+ V+ L +N L+ LP  I
Sbjct: 305 DCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           G ++KL+ L+L +N+L++LP     LKEL  L L  NQ  +L
Sbjct: 365 GQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 406


>gi|298250400|ref|ZP_06974204.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297548404|gb|EFH82271.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 384

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/367 (34%), Positives = 189/367 (51%), Gaps = 26/367 (7%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L GN+L +LP ++G +  L  L L +N +T+LP  L  L  LR L +  N+L+ LP  
Sbjct: 34  LDLTGNRLTALPEELGSLEQLQELYLDDNQITTLPHVLGKLVNLRALHVDMNRLSVLPSS 93

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           +Y L  L+ L L  NR+  +  DI  L  L   S+  N++  LP  L EL  L  L+LA 
Sbjct: 94  LYHLPRLETLRLYKNRLTNLPADIGRLQGLRDFSVGKNQLTSLPESLWELGRLQALNLAE 153

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTR-LRLSYNRLESVPETLSKC 307
           N L  L + IG  T L  LD  HN+L  +P+ LG L NLT  L LS NRL ++ E+    
Sbjct: 154 NQLSSLSERIGQLTQLQMLDAGHNQLTTLPESLGQLTNLTHYLYLSNNRLTTLSES---- 209

Query: 308 VHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQ 367
                              L + LT +  + ++ N+ T  P       T++  +   +NQ
Sbjct: 210 -------------------LFAHLTQLAYLNITDNQLTELPRSLGC-LTNLKELRIYNNQ 249

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
           +  +P  + + A  L +++  +N L +LP  LG    L EL L  N++++L   +  L N
Sbjct: 250 LATLPEELGNLAA-LRELHAMNNRLETLPDSLGKLKQLRELRLANNRLARLPTYLGELAN 308

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           L  L L NNLL  LP+S+ NL KL+ LDL  N+L +LP  +  L+ L++L L+  +L  L
Sbjct: 309 LTSLDLRNNLLASLPASLDNLAKLRALDLRANRLTTLPPGLQRLQHLEKLDLRWLKLSPL 368

Query: 488 PRAIGHL 494
           P  +  L
Sbjct: 369 PTWLDQL 375



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 182/368 (49%), Gaps = 24/368 (6%)

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L  N LT+LP+ L +L+QL+ L L  N++  LP V+ KL +L+ L++  NR+  +  
Sbjct: 33  VLDLTGNRLTALPEELGSLEQLQELYLDDNQITTLPHVLGKLVNLRALHVDMNRLSVLPS 92

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
            + +L  L  L +  N++  LP ++G L+ L    +  N L  LP+ +     L  L+L 
Sbjct: 93  SLYHLPRLETLRLYKNRLTNLPADIGRLQGLRDFSVGKNQLTSLPESLWELGRLQALNLA 152

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
            N+L ++ + +G L  L  L   +N+L ++PE+L +  +L  +                 
Sbjct: 153 ENQLSSLSERIGQLTQLQMLDAGHNQLTTLPESLGQLTNLTHY----------------- 195

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
                 + LS N+ T          T +  +N   NQ+ ++P  +     NL ++ + +N
Sbjct: 196 ------LYLSNNRLTTLSESLFAHLTQLAYLNITDNQLTELPRSLGC-LTNLKELRIYNN 248

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L +LP +LG    L EL+   N++  L + +  L  L  L L+NN L +LP+ +G L  
Sbjct: 249 QLATLPEELGNLAALRELHAMNNRLETLPDSLGKLKQLRELRLANNRLARLPTYLGELAN 308

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L  LDL  N L SLP  +  L +L+ L L++N+L +LP  +  L +L  L +    L  +
Sbjct: 309 LTSLDLRNNLLASLPASLDNLAKLRALDLRANRLTTLPPGLQRLQHLEKLDLRWLKLSPL 368

Query: 511 PEEIGTLE 518
           P  +  LE
Sbjct: 369 PTWLDQLE 376



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 120/355 (33%), Positives = 185/355 (52%), Gaps = 7/355 (1%)

Query: 175 LDLRHNKLNELP--MVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
           L LR+  L  LP  + +++L+SL++L L  NR+  +  ++  L  L  L + DN+I  LP
Sbjct: 9   LSLRYRGLTALPTSLSLHQLSSLRVLDLTGNRLTALPEELGSLEQLQELYLDDNQITTLP 68

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             LG+L NL  L +  N L  LP  + +   L TL L  N L N+P  +G L  L    +
Sbjct: 69  HVLGKLVNLRALHVDMNRLSVLPSSLYHLPRLETLRLYKNRLTNLPADIGRLQGLRDFSV 128

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--G 350
             N+L S+PE+L +   L   N+    LSSL + +   LT +  +    N+ T  P   G
Sbjct: 129 GKNQLTSLPESLWELGRLQALNLAENQLSSLSERI-GQLTQLQMLDAGHNQLTTLPESLG 187

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
             T  T  + +   +N++  +   +F+    L+ +N+ DN LT LP  LG    L EL +
Sbjct: 188 QLTNLT--HYLYLSNNRLTTLSESLFAHLTQLAYLNITDNQLTELPRSLGCLTNLKELRI 245

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             NQ++ L E++ NL  L  L   NN L+ LP S+G L++L+ L L  N+L  LP  +G 
Sbjct: 246 YNNQLATLPEELGNLAALRELHAMNNRLETLPDSLGKLKQLRELRLANNRLARLPTYLGE 305

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
           L  L  L L++N L SLP ++ +L  L  L +  N L ++P  +  L++L  L L
Sbjct: 306 LANLTSLDLRNNLLASLPASLDNLAKLRALDLRANRLTTLPPGLQRLQHLEKLDL 360



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 172/355 (48%), Gaps = 28/355 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E +  L L  + IT LP  + KL +L  L++  N+L+ LPS + ++  L  L L +N LT
Sbjct: 52  EQLQELYLDDNQITTLPHVLGKLVNLRALHVDMNRLSVLPSSLYHLPRLETLRLYKNRLT 111

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  LQ LR   +  N+L  LP  +++L  L+ L L  N++ ++   I  L+ L M
Sbjct: 112 NLPADIGRLQGLRDFSVGKNQLTSLPESLWELGRLQALNLAENQLSSLSERIGQLTQLQM 171

Query: 221 LSMRDNKIRELPPELGELKNLV-TLDLAHNHLEELPKEI-GNCTMLVTLDLQHNELVNIP 278
           L    N++  LP  LG+L NL   L L++N L  L + +  + T L  L++  N+L  +P
Sbjct: 172 LDAGHNQLTTLPESLGQLTNLTHYLYLSNNRLTTLSESLFAHLTQLAYLNITDNQLTELP 231

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             LG L NL  LR+  N+L ++PE L     L E +     L +LPD  L  L  +  + 
Sbjct: 232 RSLGCLTNLKELRIYNNQLATLPEELGNLAALRELHAMNNRLETLPDS-LGKLKQLRELR 290

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           L+ N+    P+                               NL+ +++++NLL SLP  
Sbjct: 291 LANNRLARLPT-------------------------YLGELANLTSLDLRNNLLASLPAS 325

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           L     L  L+L  N+++ L   +Q L +LE L L    L  LP+ +  L +  C
Sbjct: 326 LDNLAKLRALDLRANRLTTLPPGLQRLQHLEKLDLRWLKLSPLPTWLDQLEQRGC 380



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 121/253 (47%), Gaps = 26/253 (10%)

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSI-NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
           +  ++L     TA P+       S   + +   N++  +P  + S  + L ++ + DN +
Sbjct: 6   VTRLSLRYRGLTALPTSLSLHQLSSLRVLDLTGNRLTALPEELGS-LEQLQELYLDDNQI 64

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
           T+LP  LG  V L  L++  N++S L   + +L  LE L L  N L  LP+ IG L+ L+
Sbjct: 65  TTLPHVLGKLVNLRALHVDMNRLSVLPSSLYHLPRLETLRLYKNRLTNLPADIGRLQGLR 124

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
              + +N+L SLP  +  L  LQ L L  NQL SL   IG LT L  L  G N L ++PE
Sbjct: 125 DFSVGKNQLTSLPESLWELGRLQALNLAENQLSSLSERIGQLTQLQMLDAGHNQLTTLPE 184

Query: 513 EIGTLENL-HTLYLNDNTC-----------------------LNNIPFELALCSNLQIMS 548
            +G L NL H LYL++N                         L  +P  L   +NL+ + 
Sbjct: 185 SLGQLTNLTHYLYLSNNRLTTLSESLFAHLTQLAYLNITDNQLTELPRSLGCLTNLKELR 244

Query: 549 LDNCPLSQIPSEI 561
           + N  L+ +P E+
Sbjct: 245 IYNNQLATLPEEL 257



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 51/94 (54%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K + +  L L+ + +  LP  + +L +L  L L  N LASLP+ +  +  L  L L  N 
Sbjct: 282 KLKQLRELRLANNRLARLPTYLGELANLTSLDLRNNLLASLPASLDNLAKLRALDLRANR 341

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKL 192
           LT+LP  L  LQ L  LDLR  KL+ LP  + +L
Sbjct: 342 LTTLPPGLQRLQHLEKLDLRWLKLSPLPTWLDQL 375


>gi|417772084|ref|ZP_12419974.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680513|ref|ZP_13241762.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|418702821|ref|ZP_13263713.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|421115678|ref|ZP_15576078.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|400327871|gb|EJO80111.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409946041|gb|EKN96055.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|410012750|gb|EKO70841.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410767365|gb|EKR38040.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|455669508|gb|EMF34619.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 423

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/358 (36%), Positives = 192/358 (53%), Gaps = 4/358 (1%)

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L L F  +KT+   I  L NL  L +  N+   L  E+ +LK+L  L+L +N L  LPKE
Sbjct: 46  LDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKE 105

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           IG    L  L L  NELVN+P  +G   NL +L L  N+L  +P+ + +  +L E ++  
Sbjct: 106 IGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLS 165

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             L SLP  +   L S+ N+ L+ N+FT   S       ++ +++   N++  IP  I  
Sbjct: 166 NKLISLPTEI-EQLKSLKNLDLNNNEFTTV-SKEVMLLETLENLDLRSNKLKTIPKEI-R 222

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           + K+L  + +  N LTSLP ++     L  LNLG N+      +I  L NL  L L  N 
Sbjct: 223 QLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQ 282

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L + P  +G L+ LK L L  N++ +LP E+  L +LQ L L  N++  LP+ I  L NL
Sbjct: 283 LVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNL 342

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            +LS+  N L ++P+EIG L+ L  L L +N  L  +P E+    NLQ + LD+ P+S
Sbjct: 343 EWLSLSNNKLNALPKEIGQLKKLQRLELGNNQ-LTTLPKEIEQLKNLQRLELDSNPIS 399



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/381 (33%), Positives = 199/381 (52%), Gaps = 26/381 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++ NLDLS   +  LP  + +L +L++L L GN+   L  +I  + +L  L L  N LT 
Sbjct: 42  DVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTV 101

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  LQ L+ L L  N+L  LP  + +  +L+ L L  N++  +  +I  L NL  L
Sbjct: 102 LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQEL 161

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           S+  NK+  LP E+ +LK+L  LDL +N    + KE+     L  LDL+ N+L  IP  +
Sbjct: 162 SLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEI 221

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L +L  L L+ N+L S+P+ + +  +L   N                        L  
Sbjct: 222 RQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLN------------------------LGE 257

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P         +    + +NQ+ + P  +  + K+L  +++  N +T+LP+++  
Sbjct: 258 NRFQIFPVEILELKNLLELNLY-YNQLVEFPKEV-GQLKSLKYLSLYHNQITTLPVEVTQ 315

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L EL+L  N+I+ L ++I  L NLE L LSNN L  LP  IG L+KL+ L+L  N+L
Sbjct: 316 LPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQL 375

Query: 462 ESLPNEIGFLKELQRLILQSN 482
            +LP EI  LK LQRL L SN
Sbjct: 376 TTLPKEIEQLKNLQRLELDSN 396



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 190/370 (51%), Gaps = 26/370 (7%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L +LP++IG + NL  L L  N  T L   +  L+ L+ L+L +NKL  LP  + +L +L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           + L L  N +  +  +I    NL  L++ +NK+  LP E+G+L+NL  L L  N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
            EI     L  LDL +NE   +   +  L  L  L L  N+L+++P+ + +   L    +
Sbjct: 173 TEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
            G  L+SLP  +   L ++  + L  N+F  +P         +    + +NQ+ + P  +
Sbjct: 233 TGNQLTSLPKEI-EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY-YNQLVEFPKEV 290

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             + K+L  +++  N +T+LP+++     L EL+L  N+I+ L ++I  L NLE L LSN
Sbjct: 291 -GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSN 349

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N                       KL +LP EIG LK+LQRL L +NQL +LP+ I  L 
Sbjct: 350 N-----------------------KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK 386

Query: 496 NLSYLSVGEN 505
           NL  L +  N
Sbjct: 387 NLQRLELDSN 396



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 187/360 (51%), Gaps = 8/360 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  +  T L   + +L  L++L L  NKL  LP +IG + NL  L L  N L 
Sbjct: 64  KNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELV 123

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +   + L+ L+L +NKL  LP  + +L +L+ L L  N++ ++  +I+ L +L  
Sbjct: 124 NLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKN 183

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N+   +  E+  L+ L  LDL  N L+ +PKEI     L  L L  N+L ++P  
Sbjct: 184 LDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKE 243

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  NR +  P  + +  +L E N+    L   P   +  L S+  ++L 
Sbjct: 244 IEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKE-VGQLKSLKYLSLY 302

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P    TQ   +  ++   N+I  +P  I  + KNL  +++ +N L +LP ++G
Sbjct: 303 HNQITTLPV-EVTQLPDLQELHLSGNKITILPKEIL-QLKNLEWLSLSNNKLNALPKEIG 360

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL--KC-LDLE 457
               L  L LG NQ++ L ++I+ L NL+ L L +N +   P     +RKL  KC +D E
Sbjct: 361 QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKLLPKCEIDFE 418



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 184/356 (51%), Gaps = 27/356 (7%)

Query: 206 KTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
           K +   +Q  +++  L +    ++ LP ++G+LKNL  LDL  N    L KEI     L 
Sbjct: 31  KNLAKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
            L+L +N+L  +P  +G L NL  L L  N L ++P+ + +  +L + N++   L+ LP 
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPK 150

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
            +   L ++  ++L  NK  + P+                            + K+L  +
Sbjct: 151 EI-GQLQNLQELSLLSNKLISLPTE-------------------------IEQLKSLKNL 184

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           ++ +N  T++  ++     L  L+L +N++  + ++I+ L +L+VL+L+ N L  LP  I
Sbjct: 185 DLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
             L+ LK L+L EN+ +  P EI  LK L  L L  NQLV  P+ +G L +L YLS+  N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 506 NLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            + ++P E+  L +L  L+L+ N  +  +P E+    NL+ +SL N  L+ +P EI
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGNK-ITILPKEILQLKNLEWLSLSNNKLNALPKEI 359



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 147/261 (56%), Gaps = 3/261 (1%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           +N+ KE  + K  N+  L+L  + +T LP  + +L +L+EL L  NKL SLP++I  + +
Sbjct: 123 VNLPKEIGQFK--NLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKS 180

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L L  N  T++   +  L+ L  LDLR NKL  +P  + +L SLK+L L  N++ ++
Sbjct: 181 LKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSL 240

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
             +I+ L NL  L++ +N+ +  P E+ ELKNL+ L+L +N L E PKE+G    L  L 
Sbjct: 241 PKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLS 300

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
           L HN++  +P  +  L +L  L LS N++  +P+ + +  +L   ++    L++LP   +
Sbjct: 301 LYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKE-I 359

Query: 329 SSLTSINNITLSRNKFTAYPS 349
             L  +  + L  N+ T  P 
Sbjct: 360 GQLKKLQRLELGNNQLTTLPK 380



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 156/310 (50%), Gaps = 27/310 (8%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           N+   L N  ++  L LS+  L+++P  + +  +L + ++ G   + L   +   L  + 
Sbjct: 32  NLAKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQ-LKDLQ 90

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + L+ NK T  P     Q  ++  ++   N++  +P  I  + KNL K+N+ +N LT L
Sbjct: 91  KLNLNNNKLTVLPKE-IGQLQNLQELSLHSNELVNLPKEI-GQFKNLQKLNLDNNKLTVL 148

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L EL+L +N++  L  +I+ L +L+ L L+NN    +   +  L  L+ LD
Sbjct: 149 PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLD 208

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ------- 508
           L  NKL+++P EI  LK L+ L+L  NQL SLP+ I  L NL  L++GEN  Q       
Sbjct: 209 LRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEIL 268

Query: 509 ----------------SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                             P+E+G L++L  L L  N  +  +P E+    +LQ + L   
Sbjct: 269 ELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ-ITTLPVEVTQLPDLQELHLSGN 327

Query: 553 PLSQIPSEIV 562
            ++ +P EI+
Sbjct: 328 KITILPKEIL 337



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 120/243 (49%), Gaps = 32/243 (13%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           NLDL+ +  T +   V  L  LE L L  NKL ++P +I  + +L  L L  N LTSLP 
Sbjct: 183 NLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPK 242

Query: 165 SLANLQQLRVLDL-----------------------RHNKLNELPMVVYKLTSLKILYLR 201
            +  LQ L+ L+L                        +N+L E P  V +L SLK L L 
Sbjct: 243 EIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLY 302

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N+I T+  ++  L +L  L +  NKI  LP E+ +LKNL  L L++N L  LPKEIG  
Sbjct: 303 HNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL-----ESVPETLSKCVHLNEFNVE 316
             L  L+L +N+L  +P  +  L NL RL L  N +     E + + L KC    E + E
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISPKEKERIRKLLPKC----EIDFE 418

Query: 317 GCA 319
           G  
Sbjct: 419 GGG 421


>gi|418677552|ref|ZP_13238826.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418687293|ref|ZP_13248452.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|418742391|ref|ZP_13298764.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|400320742|gb|EJO68602.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410737617|gb|EKQ82356.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410750749|gb|EKR07729.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 403

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 198/365 (54%), Gaps = 49/365 (13%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L  N+L +LP +IG + NL  L L  N LT+LP+ +  L+ L+ LD+  N+++  P  
Sbjct: 51  LDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKTLDITRNRISTFPKE 110

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
            +KL +L++L+L  NR+  +  +I+ L+ L++L++ DN++  LP E+G+L+NL+TL L+ 
Sbjct: 111 FWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKEIGQLENLLTLYLSG 170

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N+L  LP E+G    L++L L  N+L+++P  +  L NL  L L  N   ++PE + +  
Sbjct: 171 NNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNLGILHLFDNEFNTLPEEIGELE 230

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L   ++                        SRN+F+ +P                    
Sbjct: 231 NLKILDI------------------------SRNRFSTFPKE------------------ 248

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
                  F + K L+ +N+ +N LT+LP ++G    L  L+L  N+++ L  ++  L NL
Sbjct: 249 -------FWKLKKLNVLNLSNNQLTTLPKEIGQLENLFILHLSVNKLNSLPNEMGQLKNL 301

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           +VL L+ N L  LP  IG L+KL  L L+ N+L  LP EIG L+ L  L L +N+L+S+P
Sbjct: 302 DVLYLNGNNLSNLPEEIGELKKLSILKLDSNQLTILPKEIGQLENLVTLSLSNNKLISIP 361

Query: 489 RAIGH 493
             +G 
Sbjct: 362 NELGQ 366



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 120/320 (37%), Positives = 170/320 (53%), Gaps = 4/320 (1%)

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
           +L +  N++  LP E+G+L NL  L L +N L  LP+EIG    L TLD+  N +   P 
Sbjct: 50  ILDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKTLDITRNRISTFPK 109

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
               L NL  L L+ NRL  +PE + +   LN  N+    L++LP  +   L ++  + L
Sbjct: 110 EFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKEI-GQLENLLTLYL 168

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           S N   + P+    Q  ++ S+    N++  +P  I  +  NL  +++ DN   +LP ++
Sbjct: 169 SGNNLNSLPNEM-GQLKNLISLYLSGNKLISLPKEI-RQLGNLGILHLFDNEFNTLPEEI 226

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G    L  L++  N+ S   ++   L  L VL LSNN L  LP  IG L  L  L L  N
Sbjct: 227 GELENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLTTLPKEIGQLENLFILHLSVN 286

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           KL SLPNE+G LK L  L L  N L +LP  IG L  LS L +  N L  +P+EIG LEN
Sbjct: 287 KLNSLPNEMGQLKNLDVLYLNGNNLSNLPEEIGELKKLSILKLDSNQLTILPKEIGQLEN 346

Query: 520 LHTLYLNDNTCLNNIPFELA 539
           L TL L++N  + +IP EL 
Sbjct: 347 LVTLSLSNNKLI-SIPNELG 365



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 125/355 (35%), Positives = 177/355 (49%), Gaps = 26/355 (7%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +L ++L    ++R+LDL  N+L  LP  + +L +L+ LYL  N + T+  +I  L NL  
Sbjct: 37  NLIEALKTPNEVRILDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKT 96

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+I   P E  +LKNL  L L  N L  LP+EI     L  L+L  N+L  +P  
Sbjct: 97  LDITRNRISTFPKEFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKE 156

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LS N L S+P  + +  +L    + G  L SLP  +   L ++  + L 
Sbjct: 157 IGQLENLLTLYLSGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEI-RQLGNLGILHLF 215

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+F   P                               +NL  +++  N  ++ P +  
Sbjct: 216 DNEFNTLPEE-------------------------IGELENLKILDISRNRFSTFPKEFW 250

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  LNL  NQ++ L ++I  L NL +L LS N L  LP+ +G L+ L  L L  N 
Sbjct: 251 KLKKLNVLNLSNNQLTTLPKEIGQLENLFILHLSVNKLNSLPNEMGQLKNLDVLYLNGNN 310

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L +LP EIG LK+L  L L SNQL  LP+ IG L NL  LS+  N L SIP E+G
Sbjct: 311 LSNLPEEIGELKKLSILKLDSNQLTILPKEIGQLENLVTLSLSNNKLISIPNELG 365



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 113/341 (33%), Positives = 179/341 (52%), Gaps = 26/341 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS + +T LP  + +L +LE LYL  N+L +LP +IG + NL  L +  N +++ P  
Sbjct: 51  LDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKTLDITRNRISTFPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
              L+ L VL L  N+L+ LP  + +L  L +L L  N++ T+  +I  L NL  L +  
Sbjct: 111 FWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKEIGQLENLLTLYLSG 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N +  LP E+G+LKNL++L L+ N L  LPKEI     L  L L  NE   +P+ +G L 
Sbjct: 171 NNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNLGILHLFDNEFNTLPEEIGELE 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L +S NR  + P+   K   LN  N+    L++LP  +                  
Sbjct: 231 NLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLTTLPKEI------------------ 272

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                   Q  +++ ++   N+++ +P  +  + KNL  + +  N L++LP ++G    L
Sbjct: 273 -------GQLENLFILHLSVNKLNSLPNEM-GQLKNLDVLYLNGNNLSNLPEEIGELKKL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           + L L +NQ++ L ++I  L NL  L LSNN L  +P+ +G
Sbjct: 325 SILKLDSNQLTILPKEIGQLENLVTLSLSNNKLISIPNELG 365



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 110/318 (34%), Positives = 156/318 (49%), Gaps = 27/318 (8%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           LDL+ N L  LPKEIG    L  L L +NEL  +P+ +G L NL  L ++ NR+ + P+ 
Sbjct: 51  LDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKTLDITRNRISTFPKE 110

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
             K  +L    + G  LS LP+ +                 T                  
Sbjct: 111 FWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTT------------------ 152

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
                  +P  I  + +NL  + +  N L SLP ++G    L  L L  N++  L ++I+
Sbjct: 153 -------LPKEI-GQLENLLTLYLSGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIR 204

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
            L NL +L L +N    LP  IG L  LK LD+  N+  + P E   LK+L  L L +NQ
Sbjct: 205 QLGNLGILHLFDNEFNTLPEEIGELENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQ 264

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
           L +LP+ IG L NL  L +  N L S+P E+G L+NL  LYLN N  L+N+P E+     
Sbjct: 265 LTTLPKEIGQLENLFILHLSVNKLNSLPNEMGQLKNLDVLYLNGNN-LSNLPEEIGELKK 323

Query: 544 LQIMSLDNCPLSQIPSEI 561
           L I+ LD+  L+ +P EI
Sbjct: 324 LSILKLDSNQLTILPKEI 341



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 154/274 (56%), Gaps = 2/274 (0%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  LD++++ I+  P    KL +LE L+L GN+L+ LP +I  +  L  L L +N 
Sbjct: 90  KLENLKTLDITRNRISTFPKEFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQ 149

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP  +  L+ L  L L  N LN LP  + +L +L  LYL  N++ ++  +I+ L NL
Sbjct: 150 LTTLPKEIGQLENLLTLYLSGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNL 209

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            +L + DN+   LP E+GEL+NL  LD++ N     PKE      L  L+L +N+L  +P
Sbjct: 210 GILHLFDNEFNTLPEEIGELENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLTTLP 269

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G L NL  L LS N+L S+P  + +  +L+   + G  LS+LP+  +  L  ++ + 
Sbjct: 270 KEIGQLENLFILHLSVNKLNSLPNEMGQLKNLDVLYLNGNNLSNLPEE-IGELKKLSILK 328

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
           L  N+ T  P     Q  ++ +++  +N++  IP
Sbjct: 329 LDSNQLTILPK-EIGQLENLVTLSLSNNKLISIP 361



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 77/157 (49%), Gaps = 24/157 (15%)

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           + +L LS+N L  LP  IG L  L+ L L  N+L +LP EIG L+ L+ L +  N++ + 
Sbjct: 48  VRILDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKTLDITRNRISTF 107

Query: 488 PRAIGHLTNLSYLSVGENNLQSIPE-----------------------EIGTLENLHTLY 524
           P+    L NL  L +  N L  +PE                       EIG LENL TLY
Sbjct: 108 PKEFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKEIGQLENLLTLY 167

Query: 525 LNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+ N  LN++P E+    NL  + L    L  +P EI
Sbjct: 168 LSGNN-LNSLPNEMGQLKNLISLYLSGNKLISLPKEI 203


>gi|195349707|ref|XP_002041384.1| GM10328 [Drosophila sechellia]
 gi|194123079|gb|EDW45122.1| GM10328 [Drosophila sechellia]
          Length = 1851

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T ++N+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLSNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T LS L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 198/403 (49%), Gaps = 50/403 (12%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           LEEL+L  N +  LP     +  L  LGL++N +  LP  + N + L  LD+  N + ++
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  +  L SL++     N I  +      L NL++L + D  +  LP + G L  L +L+
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           L  N L+ LP+ I   T L  LDL  NE+ ++P  LG L  L  L L +N+L+ +P  L 
Sbjct: 159 LRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPEL- 217

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
                               GLL+ LT ++   +S N+    P                 
Sbjct: 218 --------------------GLLTKLTYLD---VSENRLEELP----------------- 237

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           N+I     G+ S    L+ +++  NLL +LP  +     LT L L  N++ +L++ + N 
Sbjct: 238 NEIS----GLVS----LTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNC 289

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
            N++ L+L+ N L +LP+SIG + KL  L+++ N LE LP EIG    L  L L+ N+L 
Sbjct: 290 ENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLK 349

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            LP  +G+ T L  L V  N L  +P  +  L+ L  ++L++N
Sbjct: 350 KLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQ-LKAVWLSEN 391



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 192/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L+ LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|410939195|ref|ZP_11371030.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410785700|gb|EKR74656.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 410

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/346 (34%), Positives = 185/346 (53%), Gaps = 11/346 (3%)

Query: 186 PMVVYKLTSLKILYLRFNR--IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVT 243
           P  V++L+ L      FNR  + ++   I  L NL +L +  +++  LP E+G L+NL  
Sbjct: 46  PENVFELSFL------FNREQLTSIPNAIGRLQNLRILELTGSQLTSLPKEIGRLQNLQG 99

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L L  N L  LP+EIG    L  L L  N+L ++P  +G L NL  L LS NR  ++P+ 
Sbjct: 100 LFLNINRLSSLPQEIGQLQNLKRLFLSLNQLTSLPKEIGQLQNLQELDLSSNRFTTLPKE 159

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           + +  +L E ++ G   ++LP  +   L ++  + LS N+FT  P     Q  S+  ++ 
Sbjct: 160 IGQLQNLQELDLSGNQFTTLPKEI-GQLQNLQKLDLSNNRFTTLPKE-VGQLQSLEELDL 217

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
             NQ   +P  I  R +N+  +N+  N LTSL  ++G +  L  L+L  N+ + L ++I 
Sbjct: 218 SGNQFTTLPKEI-RRRQNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTTLPKEIG 276

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
            L NLE L LS N     P  +     +  L L++N+L++LP EIG  + L+ L L+ NQ
Sbjct: 277 QLQNLETLNLSGNRFTTFPKEVRRQENITWLYLDDNQLKALPKEIGQFQHLEGLFLKGNQ 336

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
           L SLP+ I  L NL  L + +N   + P+EI  L+NL  L L  N+
Sbjct: 337 LTSLPKEIEQLQNLQQLDLSKNRFTTFPKEIEQLQNLKLLRLYSNS 382



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 179/344 (52%), Gaps = 28/344 (8%)

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           LS L  R+ ++  +P  +G L+NL  L+L  + L  LPKEIG    L  L L  N L ++
Sbjct: 52  LSFLFNRE-QLTSIPNAIGRLQNLRILELTGSQLTSLPKEIGRLQNLQGLFLNINRLSSL 110

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  +G L NL RL LS N+L S+P+ + +  +L E ++     ++LP  +   L ++  +
Sbjct: 111 PQEIGQLQNLKRLFLSLNQLTSLPKEIGQLQNLQELDLSSNRFTTLPKEI-GQLQNLQEL 169

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            LS N+FT  P                             + +NL K+++ +N  T+LP 
Sbjct: 170 DLSGNQFTTLPKE-------------------------IGQLQNLQKLDLSNNRFTTLPK 204

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           ++G    L EL+L  NQ + L ++I+   N+  L L+ N L  L   IG  + L+ LDL 
Sbjct: 205 EVGQLQSLEELDLSGNQFTTLPKEIRRRQNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLS 264

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
           +N+  +LP EIG L+ L+ L L  N+  + P+ +    N+++L + +N L+++P+EIG  
Sbjct: 265 KNRFTTLPKEIGQLQNLETLNLSGNRFTTFPKEVRRQENITWLYLDDNQLKALPKEIGQF 324

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           ++L  L+L  N  L ++P E+    NLQ + L     +  P EI
Sbjct: 325 QHLEGLFLKGNQ-LTSLPKEIEQLQNLQQLDLSKNRFTTFPKEI 367



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 185/365 (50%), Gaps = 32/365 (8%)

Query: 101 ENILNLDL--SKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           EN+  L    ++  +T +P ++ +L +L  L L G++L SLP +IG + NL  L L  N 
Sbjct: 47  ENVFELSFLFNREQLTSIPNAIGRLQNLRILELTGSQLTSLPKEIGRLQNLQGLFLNINR 106

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L+SLP  +  LQ L+ L L  N+L  LP  + +L +L+ L L  NR  T+  +I  L NL
Sbjct: 107 LSSLPQEIGQLQNLKRLFLSLNQLTSLPKEIGQLQNLQELDLSSNRFTTLPKEIGQLQNL 166

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L +  N+   LP E+G+L+NL  LDL++N    LPKE+G    L  LDL  N+   +P
Sbjct: 167 QELDLSGNQFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQSLEELDLSGNQFTTLP 226

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINN 336
             +    N+  L L+ N+L S+ + + +  +L   ++     ++LP   G L +L ++N 
Sbjct: 227 KEIRRRQNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTTLPKEIGQLQNLETLN- 285

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
             LS N+FT +P                             R +N++ + + DN L +LP
Sbjct: 286 --LSGNRFTTFPKE-------------------------VRRQENITWLYLDDNQLKALP 318

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G +  L  L L  NQ++ L ++I+ L NL+ L LS N     P  I  L+ LK L L
Sbjct: 319 KEIGQFQHLEGLFLKGNQLTSLPKEIEQLQNLQQLDLSKNRFTTFPKEIEQLQNLKLLRL 378

Query: 457 EENKL 461
             N  
Sbjct: 379 YSNSF 383



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/288 (32%), Positives = 152/288 (52%), Gaps = 6/288 (2%)

Query: 276 NIPDMLGNLINLTRLRLSYNR--LESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           N+ D L N  N+  L   +NR  L S+P  + +  +L    + G  L+SLP  +   L +
Sbjct: 38  NLDDALDNPENVFELSFLFNREQLTSIPNAIGRLQNLRILELTGSQLTSLPKEI-GRLQN 96

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           +  + L+ N+ ++ P     Q  ++  +    NQ+  +P  I  + +NL ++++  N  T
Sbjct: 97  LQGLFLNINRLSSLPQE-IGQLQNLKRLFLSLNQLTSLPKEI-GQLQNLQELDLSSNRFT 154

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP ++G    L EL+L  NQ + L ++I  L NL+ L LSNN    LP  +G L+ L+ 
Sbjct: 155 TLPKEIGQLQNLQELDLSGNQFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQSLEE 214

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           LDL  N+  +LP EI   + ++ L L  NQL SL + IG   NL  L + +N   ++P+E
Sbjct: 215 LDLSGNQFTTLPKEIRRRQNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTTLPKE 274

Query: 514 IGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           IG L+NL TL L+ N      P E+    N+  + LD+  L  +P EI
Sbjct: 275 IGQLQNLETLNLSGNR-FTTFPKEVRRQENITWLYLDDNQLKALPKEI 321



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 89/170 (52%), Gaps = 5/170 (2%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           + +NI  L+L+ + +T L   + +  +L+ L L  N+  +LP +IG + NL  L L+ N 
Sbjct: 231 RRQNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTTLPKEIGQLQNLETLNLSGNR 290

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
            T+ P  +   + +  L L  N+L  LP  + +   L+ L+L+ N++ ++  +I+ L NL
Sbjct: 291 FTTFPKEVRRQENITWLYLDDNQLKALPKEIGQFQHLEGLFLKGNQLTSLPKEIEQLQNL 350

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHL-----EELPKEIGNCTM 263
             L +  N+    P E+ +L+NL  L L  N       +E+ K + NC +
Sbjct: 351 QQLDLSKNRFTTFPKEIEQLQNLKLLRLYSNSFSLEEKQEIQKLLPNCEI 400


>gi|24213573|ref|NP_711054.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386073187|ref|YP_005987504.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24194363|gb|AAN48072.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353456976|gb|AER01521.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 423

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 131/381 (34%), Positives = 199/381 (52%), Gaps = 26/381 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++ NLDLS   +  LP  + +L +L++L L GN+   L  +I  + +L  L L  N LT 
Sbjct: 42  DVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTV 101

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  LQ L+ L L  N+L  LP  + +  +L+ L L  N++  +  +I  L NL  L
Sbjct: 102 LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQEL 161

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           S+  NK+  LP E+ +LK+L  LDL HN L  + KE+     L  LDL+ N+L  IP  +
Sbjct: 162 SLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEI 221

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L +L  L L+ N+L S+P+ + +  +L   N                        L  
Sbjct: 222 RQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLN------------------------LGE 257

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F   P         +    + +NQ+ + P  +  + K+L  +++  N +T+LP+++  
Sbjct: 258 NRFQILPVEILELKNLLELNLY-YNQLVEFPKEV-GQLKSLKYLSLYHNQITTLPVEVTQ 315

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L EL+L  N+I+ L ++I  L NLE L LSNN L  LP  IG L+KL+ L+L  N+L
Sbjct: 316 LPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQL 375

Query: 462 ESLPNEIGFLKELQRLILQSN 482
            +LP EI  LK LQRL L SN
Sbjct: 376 TTLPKEIEQLKNLQRLELDSN 396



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 129/358 (36%), Positives = 192/358 (53%), Gaps = 4/358 (1%)

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L L F  +KT+   I  L NL  L +  N+   L  E+ +LK+L  L+L +N L  LPKE
Sbjct: 46  LDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKE 105

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           IG    L  L L  NELVN+P  +G   NL +L L  N+L  +P+ + +  +L E ++  
Sbjct: 106 IGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLS 165

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             L SLP  +   L S+ N+ L+ N+ T   S       ++ +++   N++  IP  I  
Sbjct: 166 NKLISLPTEI-EQLKSLKNLDLNHNELTTV-SKEVMLLETLENLDLRSNKLKTIPKEI-R 222

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           + K+L  + +  N LTSLP ++     L  LNLG N+   L  +I  L NL  L L  N 
Sbjct: 223 QLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQILPVEILELKNLLELNLYYNQ 282

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L + P  +G L+ LK L L  N++ +LP E+  L +LQ L L  N++  LP+ I  L NL
Sbjct: 283 LVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNL 342

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            +LS+  N L ++P+EIG L+ L  L L +N  L  +P E+    NLQ + LD+ P+S
Sbjct: 343 EWLSLSNNKLNALPKEIGQLKKLQRLELGNNQ-LTTLPKEIEQLKNLQRLELDSNPIS 399



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 124/370 (33%), Positives = 190/370 (51%), Gaps = 26/370 (7%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L +LP++IG + NL  L L  N  T L   +  L+ L+ L+L +NKL  LP  + +L +L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           + L L  N +  +  +I    NL  L++ +NK+  LP E+G+L+NL  L L  N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
            EI     L  LDL HNEL  +   +  L  L  L L  N+L+++P+ + +   L    +
Sbjct: 173 TEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
            G  L+SLP  +   L ++  + L  N+F   P         +    + +NQ+ + P  +
Sbjct: 233 TGNQLTSLPKEI-EQLQNLKTLNLGENRFQILPVEILELKNLLELNLY-YNQLVEFPKEV 290

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             + K+L  +++  N +T+LP+++     L EL+L  N+I+ L ++I  L NLE L LSN
Sbjct: 291 -GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSN 349

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N                       KL +LP EIG LK+LQRL L +NQL +LP+ I  L 
Sbjct: 350 N-----------------------KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK 386

Query: 496 NLSYLSVGEN 505
           NL  L +  N
Sbjct: 387 NLQRLELDSN 396



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/290 (33%), Positives = 162/290 (55%), Gaps = 3/290 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L  + + +LP  + +  +L++L L  NKL  LP +IG + NL  L L  N L 
Sbjct: 110 QNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLI 169

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP  +  L+ L+ LDL HN+L  +   V  L +L+ L LR N++KT+  +I+ L +L +
Sbjct: 170 SLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKV 229

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+ +L+NL TL+L  N  + LP EI     L+ L+L +N+LV  P  
Sbjct: 230 LMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQILPVEILELKNLLELNLYYNQLVEFPKE 289

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L +L  L L +N++ ++P  +++   L E ++ G  ++ LP  +L  L ++  ++LS
Sbjct: 290 VGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEIL-QLKNLEWLSLS 348

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
            NK  A P     Q   +  +   +NQ+  +P  I  + KNL ++ +  N
Sbjct: 349 NNKLNALPK-EIGQLKKLQRLELGNNQLTTLPKEI-EQLKNLQRLELDSN 396



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 186/356 (52%), Gaps = 27/356 (7%)

Query: 206 KTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
           K +   +Q  +++  L +    ++ LP ++G+LKNL  LDL  N    L KEI     L 
Sbjct: 31  KNLAKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
            L+L +N+L  +P  +G L NL  L L  N L ++P+ + +  +L + N++   L+ LP 
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPK 150

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
            +   L ++  ++L  NK  + P+    Q  S+ +++  HN+                  
Sbjct: 151 EI-GQLQNLQELSLLSNKLISLPTE-IEQLKSLKNLDLNHNE------------------ 190

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
                 LT++  ++     L  L+L +N++  + ++I+ L +L+VL+L+ N L  LP  I
Sbjct: 191 ------LTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
             L+ LK L+L EN+ + LP EI  LK L  L L  NQLV  P+ +G L +L YLS+  N
Sbjct: 245 EQLQNLKTLNLGENRFQILPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 506 NLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            + ++P E+  L +L  L+L+ N  +  +P E+    NL+ +SL N  L+ +P EI
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGNK-ITILPKEILQLKNLEWLSLSNNKLNALPKEI 359



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 188/360 (52%), Gaps = 8/360 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  +  T L   + +L  L++L L  NKL  LP +IG + NL  L L  N L 
Sbjct: 64  KNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELV 123

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +   + L+ L+L +NKL  LP  + +L +L+ L L  N++ ++  +I+ L +L  
Sbjct: 124 NLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKN 183

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  +  E+  L+ L  LDL  N L+ +PKEI     L  L L  N+L ++P  
Sbjct: 184 LDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKE 243

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  NR + +P  + +  +L E N+    L   P   +  L S+  ++L 
Sbjct: 244 IEQLQNLKTLNLGENRFQILPVEILELKNLLELNLYYNQLVEFPKE-VGQLKSLKYLSLY 302

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P    TQ   +  ++   N+I  +P  I  + KNL  +++ +N L +LP ++G
Sbjct: 303 HNQITTLPV-EVTQLPDLQELHLSGNKITILPKEIL-QLKNLEWLSLSNNKLNALPKEIG 360

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL--KC-LDLE 457
               L  L LG NQ++ L ++I+ L NL+ L L +N +   P     +RKL  KC +D E
Sbjct: 361 QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKLLPKCEIDFE 418



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 149/261 (57%), Gaps = 3/261 (1%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           +N+ KE  + K  N+  L+L  + +T LP  + +L +L+EL L  NKL SLP++I  + +
Sbjct: 123 VNLPKEIGQFK--NLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKS 180

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L L  N LT++   +  L+ L  LDLR NKL  +P  + +L SLK+L L  N++ ++
Sbjct: 181 LKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSL 240

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
             +I+ L NL  L++ +N+ + LP E+ ELKNL+ L+L +N L E PKE+G    L  L 
Sbjct: 241 PKEIEQLQNLKTLNLGENRFQILPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLS 300

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
           L HN++  +P  +  L +L  L LS N++  +P+ + +  +L   ++    L++LP   +
Sbjct: 301 LYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKE-I 359

Query: 329 SSLTSINNITLSRNKFTAYPS 349
             L  +  + L  N+ T  P 
Sbjct: 360 GQLKKLQRLELGNNQLTTLPK 380



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 157/310 (50%), Gaps = 27/310 (8%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           N+   L N  ++  L LS+  L+++P  + +  +L + ++ G   + L   +   L  + 
Sbjct: 32  NLAKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQ-LKDLQ 90

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + L+ NK T  P     Q  ++  ++   N++  +P  I  + KNL K+N+ +N LT L
Sbjct: 91  KLNLNNNKLTVLPKE-IGQLQNLQELSLHSNELVNLPKEI-GQFKNLQKLNLDNNKLTVL 148

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L EL+L +N++  L  +I+ L +L+ L L++N L  +   +  L  L+ LD
Sbjct: 149 PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLD 208

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ------- 508
           L  NKL+++P EI  LK L+ L+L  NQL SLP+ I  L NL  L++GEN  Q       
Sbjct: 209 LRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQILPVEIL 268

Query: 509 ----------------SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                             P+E+G L++L  L L  N  +  +P E+    +LQ + L   
Sbjct: 269 ELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ-ITTLPVEVTQLPDLQELHLSGN 327

Query: 553 PLSQIPSEIV 562
            ++ +P EI+
Sbjct: 328 KITILPKEIL 337



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 121/243 (49%), Gaps = 32/243 (13%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           NLDL+ + +T +   V  L  LE L L  NKL ++P +I  + +L  L L  N LTSLP 
Sbjct: 183 NLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPK 242

Query: 165 SLANLQQLRVLDL-----------------------RHNKLNELPMVVYKLTSLKILYLR 201
            +  LQ L+ L+L                        +N+L E P  V +L SLK L L 
Sbjct: 243 EIEQLQNLKTLNLGENRFQILPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLY 302

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N+I T+  ++  L +L  L +  NKI  LP E+ +LKNL  L L++N L  LPKEIG  
Sbjct: 303 HNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL-----ESVPETLSKCVHLNEFNVE 316
             L  L+L +N+L  +P  +  L NL RL L  N +     E + + L KC    E + E
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISPKEKERIRKLLPKC----EIDFE 418

Query: 317 GCA 319
           G  
Sbjct: 419 GGG 421


>gi|291400150|ref|XP_002716435.1| PREDICTED: leucine-rich repeats and IQ motif containing 4
           [Oryctolagus cuniculus]
          Length = 561

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 140/452 (30%), Positives = 217/452 (48%), Gaps = 33/452 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL------ 159
           +D +  ++T +P  +  L  LEE++L  N +  +P  I ++ N+  L L +N+L      
Sbjct: 31  IDAANRNLTAIPLEILALKELEEVHLENNLIEEIPKHIQHLKNIKILYLNKNNLRNLCPE 90

Query: 160 -------------------TSLPDSLANLQQLRVLDLRHNKLNELPMVVYK-LTSLKILY 199
                              +SLP  ++ L  LR L L H  L E+P+V+ K L  L++L 
Sbjct: 91  LGGLGSLEGLDLSYNPILASSLP-VISCLHTLRELRLYHINLGEIPIVICKNLHHLELLG 149

Query: 200 LRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIG 259
           L  N ++ +  +I   + L  + ++ N+    P EL  L NL  +DL  N L  +P+EIG
Sbjct: 150 LTGNHLECLPKEIVNQTKLREIYLKQNQFEVFPQELCVLYNLEIIDLDENKLSAIPEEIG 209

Query: 260 NCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA 319
           N T L    + +N L  +PD LG    ++ L +S+N L+S+P TLS+   + E  + G  
Sbjct: 210 NLTSLHKFFVAYNNLPFVPDSLGQCEKMSVLDVSHNLLQSLPHTLSQLTEMTEIGLSGNH 269

Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           L  +P  LL   TS++ + L              +  +++ ++   N +D  P  I    
Sbjct: 270 LEKVPR-LLCRWTSLHLLYLQDTGLRGLRRSF-KRLVNLHFLDLSQNHLDHCPLQI-CML 326

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           KNL  + + DN +  LP  L     L  L L  N+ S   E++  L +LE L +  +   
Sbjct: 327 KNLEVLALDDNKIGQLPSALSFLSKLKILGLTGNKFSVFPEEVFALASLEKLYIGQDRGS 386

Query: 440 KL---PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
           KL   P SIG L+ LK L +E N LE LP  +G +  L+ L  Q N L  LP AI     
Sbjct: 387 KLTHVPESIGKLQSLKELYIENNYLEYLPVSLGSMPNLEVLFCQHNLLRQLPDAICQAQA 446

Query: 497 LSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L  L + +N L  +PE + +L NL  L L DN
Sbjct: 447 LKQLWLDDNLLTRLPENLDSLVNLKILTLKDN 478



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 174/366 (47%), Gaps = 23/366 (6%)

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
           L HLE L L GN L  LP +I   T L  + L +N     P  L  L  L ++DL  NKL
Sbjct: 142 LHHLELLGLTGNHLECLPKEIVNQTKLREIYLKQNQFEVFPQELCVLYNLEIIDLDENKL 201

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
           + +P  +  LTSL   ++ +N +  V   +     +S+L +  N ++ LP  L +L  + 
Sbjct: 202 SAIPEEIGNLTSLHKFFVAYNNLPFVPDSLGQCEKMSVLDVSHNLLQSLPHTLSQLTEMT 261

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            + L+ NHLE++P+ +   T L  L LQ   L  +      L+NL  L LS N L+  P 
Sbjct: 262 EIGLSGNHLEKVPRLLCRWTSLHLLYLQDTGLRGLRRSFKRLVNLHFLDLSQNHLDHCPL 321

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            +    +L    ++   +  LP   LS L+ +  + L+ NKF+ +P         V+++ 
Sbjct: 322 QICMLKNLEVLALDDNKIGQLPSA-LSFLSKLKILGLTGNKFSVFPE-------EVFAL- 372

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
                ++K+  G    +K           LT +P  +G    L EL +  N +  L   +
Sbjct: 373 ---ASLEKLYIGQDRGSK-----------LTHVPESIGKLQSLKELYIENNYLEYLPVSL 418

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            ++ NLEVL   +NLL++LP +I   + LK L L++N L  LP  +  L  L+ L L+ N
Sbjct: 419 GSMPNLEVLFCQHNLLRQLPDAICQAQALKQLWLDDNLLTRLPENLDSLVNLKILTLKDN 478

Query: 483 QLVSLP 488
            +   P
Sbjct: 479 PMEEPP 484



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 199/427 (46%), Gaps = 32/427 (7%)

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           PD      +   +D  +  L  +P+ +  L  L+ ++L  N I+ +   IQ+L N+ +L 
Sbjct: 19  PDPQQVTDRTFFIDAANRNLTAIPLEILALKELEEVHLENNLIEEIPKHIQHLKNIKILY 78

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT-MLVTLDLQHNELVNIPDML 281
           +  N +R L PELG L +L  LDL++N +      + +C   L  L L H  L  IP ++
Sbjct: 79  LNKNNLRNLCPELGGLGSLEGLDLSYNPILASSLPVISCLHTLRELRLYHINLGEIPIVI 138

Query: 282 -GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
             NL +L  L L+ N LE +P+ +     L E  ++       P  L   L ++  I L 
Sbjct: 139 CKNLHHLELLGLTGNHLECLPKEIVNQTKLREIYLKQNQFEVFPQEL-CVLYNLEIIDLD 197

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            NK +A P       TS++     +N +  +P  +  + + +S +++  NLL SLP  L 
Sbjct: 198 ENKLSAIPEEI-GNLTSLHKFFVAYNNLPFVPDSL-GQCEKMSVLDVSHNLLQSLPHTLS 255

Query: 401 TWVGLTELNLGTNQISK-----------------------LSEDIQNLVNLEVLVLSNNL 437
               +TE+ L  N + K                       L    + LVNL  L LS N 
Sbjct: 256 QLTEMTEIGLSGNHLEKVPRLLCRWTSLHLLYLQDTGLRGLRRSFKRLVNLHFLDLSQNH 315

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L   P  I  L+ L+ L L++NK+  LP+ + FL +L+ L L  N+    P  +  L +L
Sbjct: 316 LDHCPLQICMLKNLEVLALDDNKIGQLPSALSFLSKLKILGLTGNKFSVFPEEVFALASL 375

Query: 498 SYLSVGEN---NLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
             L +G++    L  +PE IG L++L  LY+ +N  L  +P  L    NL+++   +  L
Sbjct: 376 EKLYIGQDRGSKLTHVPESIGKLQSLKELYIENNY-LEYLPVSLGSMPNLEVLFCQHNLL 434

Query: 555 SQIPSEI 561
            Q+P  I
Sbjct: 435 RQLPDAI 441



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 164/338 (48%), Gaps = 16/338 (4%)

Query: 96  LRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           L C  + I+N      + L ++     P  +  L +LE + L  NKL+++P +IG +T+L
Sbjct: 155 LECLPKEIVNQTKLREIYLKQNQFEVFPQELCVLYNLEIIDLDENKLSAIPEEIGNLTSL 214

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
               +A N+L  +PDSL   +++ VLD+ HN L  LP  + +LT +  + L  N ++ V 
Sbjct: 215 HKFFVAYNNLPFVPDSLGQCEKMSVLDVSHNLLQSLPHTLSQLTEMTEIGLSGNHLEKVP 274

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
             +   ++L +L ++D  +R L      L NL  LDL+ NHL+  P +I     L  L L
Sbjct: 275 RLLCRWTSLHLLYLQDTGLRGLRRSFKRLVNLHFLDLSQNHLDHCPLQICMLKNLEVLAL 334

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV---EGCALSSLPDG 326
             N++  +P  L  L  L  L L+ N+    PE +     L +  +    G  L+ +P+ 
Sbjct: 335 DDNKIGQLPSALSFLSKLKILGLTGNKFSVFPEEVFALASLEKLYIGQDRGSKLTHVPES 394

Query: 327 LLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
            +  L S+  + +  N     P   G       ++    +HN + ++P  I  +A+ L +
Sbjct: 395 -IGKLQSLKELYIENNYLEYLPVSLGSMPNLEVLFC---QHNLLRQLPDAI-CQAQALKQ 449

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
           + + DNLLT LP +L + V L  L L  N + +   D+
Sbjct: 450 LWLDDNLLTRLPENLDSLVNLKILTLKDNPMEEPPVDV 487


>gi|169260659|gb|ACA52056.1| densin 11-21 [Rattus norvegicus]
          Length = 495

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 193/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 29  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSS 88

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 89  LPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 148

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 149 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 206

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 207 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 242

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 243 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 302

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 303 LSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 361

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 362 LEFLPEEIGQMQRLRVLNLSDNRLKNLP 389



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 195/416 (46%), Gaps = 27/416 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 22  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSI 81

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L+SLP S+A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 82  PDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 141

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 142 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 201

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+ +P ++ K   L   ++    + ++ D  +S   ++
Sbjct: 202 SELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETV-DMDISGCEAL 260

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                         G+    K L+ + + DN LT 
Sbjct: 261 EDLLLSSNMLQQLPDS----------------------IGLL---KKLTTLKVDDNQLTM 295

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    L E +   N++  L   I  L +L  L +  N L +LP  IG+ + +  +
Sbjct: 296 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 355

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
            L  NKLE LP EIG ++ L+ L L  N+L +LP +   L  L+ L + +N  +++
Sbjct: 356 SLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 411



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 70/128 (54%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L +  + +T LP ++  L+ LEE     N+L SLP  IGY+ +L  L + EN L  LP  
Sbjct: 286 LKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPRE 345

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + + + + V+ LR NKL  LP  + ++  L++L L  NR+K +      L  L+ L + D
Sbjct: 346 IGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSD 405

Query: 226 NKIRELPP 233
           N+ + L P
Sbjct: 406 NQSKALIP 413


>gi|71991531|ref|NP_001023851.1| Protein LET-413, isoform b [Caenorhabditis elegans]
 gi|76803776|sp|O61967.3|LAP1_CAEEL RecName: Full=Protein lap1; AltName: Full=Lethal protein 413
 gi|351062135|emb|CCD70054.1| Protein LET-413, isoform b [Caenorhabditis elegans]
          Length = 699

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/383 (32%), Positives = 189/383 (49%), Gaps = 26/383 (6%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +L+L+ ++I  L   +  L HL  L +  N+LA LP++IG +T L  L L  NS+  LPD
Sbjct: 40  DLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPAEIGNLTQLIELNLNRNSIAKLPD 99

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
           ++ N + L  L+L  N    LP  + + +S+ IL L    +  +  +I  L+NL +L  R
Sbjct: 100 TMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSLTLLPSNIGSLTNLRVLEAR 159

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           DN +R +P  + EL+ L  LDL  N LE LP EIG  T L    +  N L ++PD +   
Sbjct: 160 DNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGC 219

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             L +L +S N++  +PE L +  +L + N+    +  LP      L  +  +   RN  
Sbjct: 220 RMLDQLDVSENQIIRLPENLGRMPNLTDLNISINEIIELPSS-FGELKRLQMLKADRNSL 278

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
                               HN   +I      + ++L+++ +  N LT LP  +G    
Sbjct: 279 --------------------HNLTSEI-----GKCQSLTELYLGQNFLTDLPDTIGDLRQ 313

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LT LN+  N +S + + I N  +L VL L  N+L +LP +IG    L  LD+  NKL  L
Sbjct: 314 LTTLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVLDVASNKLPHL 373

Query: 465 PNEIGFLKELQRLILQSNQLVSL 487
           P  +  L +LQ L L  NQ  S+
Sbjct: 374 PFTVKVLYKLQALWLSENQTQSI 396



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 185/359 (51%), Gaps = 4/359 (1%)

Query: 205 IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTML 264
           ++ +  DI     L  L++  N I+EL   L  L++L  LD++ N L  LP EIGN T L
Sbjct: 25  LQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPAEIGNLTQL 84

Query: 265 VTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
           + L+L  N +  +PD + N   LT L LS N    +PET+ +C  +   ++   +L+ LP
Sbjct: 85  IELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSLTLLP 144

Query: 325 DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
             +  SLT++  +    N     P     +   +  ++   N+++ +P  I  +  +L +
Sbjct: 145 SNI-GSLTNLRVLEARDNLLRTIPLS-IVELRKLEELDLGQNELEALPAEI-GKLTSLRE 201

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
             +  N LTSLP  +     L +L++  NQI +L E++  + NL  L +S N + +LPSS
Sbjct: 202 FYVDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENLGRMPNLTDLNISINEIIELPSS 261

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
            G L++L+ L  + N L +L +EIG  + L  L L  N L  LP  IG L  L+ L+V  
Sbjct: 262 FGELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDC 321

Query: 505 NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVV 563
           NNL  IP+ IG  ++L  L L  N  L  +P  +  C NL ++ + +  L  +P  + V
Sbjct: 322 NNLSDIPDTIGNCKSLTVLSLRQN-ILTELPMTIGKCENLTVLDVASNKLPHLPFTVKV 379



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 183/393 (46%), Gaps = 26/393 (6%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L ++PS I     L  L L  N++  L   L +L+ LR+LD+  N+L  LP  +  LT L
Sbjct: 25  LQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPAEIGNLTQL 84

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
             L L  N I  +   +Q    L+ L++  N    LP  + E  ++  L L    L  LP
Sbjct: 85  IELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSLTLLP 144

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
             IG+ T L  L+ + N L  IP  +  L  L  L L  N LE++P  + K   L EF V
Sbjct: 145 SNIGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFYV 204

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
           +  +L+SLPD       SI+   +                  +  ++   NQI ++P  +
Sbjct: 205 DINSLTSLPD-------SISGCRM------------------LDQLDVSENQIIRLPENL 239

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             R  NL+ +N+  N +  LP   G    L  L    N +  L+ +I    +L  L L  
Sbjct: 240 -GRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQ 298

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N L  LP +IG+LR+L  L+++ N L  +P+ IG  K L  L L+ N L  LP  IG   
Sbjct: 299 NFLTDLPDTIGDLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTIGKCE 358

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           NL+ L V  N L  +P  +  L  L  L+L++N
Sbjct: 359 NLTVLDVASNKLPHLPFTVKVLYKLQALWLSEN 391



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 152/330 (46%), Gaps = 29/330 (8%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS +  T LP ++ + + +  L L    L  LPS IG +TNL  L   +N L ++P S
Sbjct: 110 LNLSSNPFTRLPETICECSSITILSLNETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLS 169

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L++L  LDL  N+L  LP  + KLTSL+  Y+  N + ++   I     L  L + +
Sbjct: 170 IVELRKLEELDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRMLDQLDVSE 229

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I  LP  LG + NL  L+++ N + ELP   G    L  L    N L N+   +G   
Sbjct: 230 NQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNSLHNLTSEIGKCQ 289

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +LT L L  N L  +P+T+     L   NV+   LS +PD  + +  S+  ++L +N  T
Sbjct: 290 SLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLSDIPD-TIGNCKSLTVLSLRQNILT 348

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                             + +NL+ +++  N L  LP  +     L
Sbjct: 349 ELPM-------------------------TIGKCENLTVLDVASNKLPHLPFTVKVLYKL 383

Query: 406 TELNLGTNQ---ISKLSEDIQNLVNLEVLV 432
             L L  NQ   I KLSE   +   ++V+ 
Sbjct: 384 QALWLSENQTQSILKLSETRDDRKGIKVVT 413



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 8/271 (2%)

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--G 350
           S + L+++P  + +   L + N+    +  L D  L SL  +  + +S N+    P+  G
Sbjct: 21  SQSNLQAIPSDIFRFRKLEDLNLTMNNIKEL-DHRLFSLRHLRILDVSDNELAVLPAEIG 79

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
             TQ   +  +N   N I K+P       K L+ +N+  N  T LP  +     +T L+L
Sbjct: 80  NLTQ---LIELNLNRNSIAKLP-DTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSL 135

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
               ++ L  +I +L NL VL   +NLL+ +P SI  LRKL+ LDL +N+LE+LP EIG 
Sbjct: 136 NETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGK 195

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+   +  N L SLP +I     L  L V EN +  +PE +G + NL  L ++ N  
Sbjct: 196 LTSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENLGRMPNLTDLNISINEI 255

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +  +P        LQ++  D   L  + SEI
Sbjct: 256 I-ELPSSFGELKRLQMLKADRNSLHNLTSEI 285



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 95/182 (52%), Gaps = 1/182 (0%)

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           + +  ++   + L ++P D+  +  L +LNL  N I +L   + +L +L +L +S+N L 
Sbjct: 13  RQVDSIDRSQSNLQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELA 72

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
            LP+ IGNL +L  L+L  N +  LP+ +   K L  L L SN    LP  I   ++++ 
Sbjct: 73  VLPAEIGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITI 132

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPS 559
           LS+ E +L  +P  IG+L NL  L   DN  L  IP  +     L+ + L    L  +P+
Sbjct: 133 LSLNETSLTLLPSNIGSLTNLRVLEARDN-LLRTIPLSIVELRKLEELDLGQNELEALPA 191

Query: 560 EI 561
           EI
Sbjct: 192 EI 193



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 121/278 (43%), Gaps = 50/278 (17%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +L++S + I  LP S  +L  L+ L    N L +L S+IG   +LT L L +N LT 
Sbjct: 244 NLTDLNISINEIIELPSSFGELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQNFLTD 303

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LPD++ +L+QL  L++  N L+++P  +    SL +                       L
Sbjct: 304 LPDTIGDLRQLTTLNVDCNNLSDIPDTIGNCKSLTV-----------------------L 340

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           S+R N + ELP  +G+ +NL  LD+A N L  LP  +     L  L L  N+  +I    
Sbjct: 341 SLRQNILTELPMTIGKCENLTVLDVASNKLPHLPFTVKVLYKLQALWLSENQTQSI---- 396

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
                   L+LS  R +     +  C  L + +          DG   S ++ +N    R
Sbjct: 397 --------LKLSETRDDRKGIKVVTCYLLPQVDA--------IDGEGRSGSAQHNT--DR 438

Query: 342 NKFTAYPSGGP-TQFTSVYSINFEHNQIDKIPYGIFSR 378
             F     GGP   F       FE N+  +I  G F R
Sbjct: 439 GAFL----GGPKVHFHDQADTTFEENKEAEIHLGNFER 472


>gi|47228901|emb|CAG09416.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 452

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 184/367 (50%), Gaps = 4/367 (1%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + + V+D RH  L  +P  +Y+   SL+ L L  N+++ +     +L  L  L + DN+I
Sbjct: 12  RHVEVIDKRHCSLLFVPDEIYRYERSLEELLLDANQLRDLPKQFFHLVKLRKLGLSDNEI 71

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + +PPE+     LV LD++ N + E+P+ I  C+ L   D   N L  +P+    L NLT
Sbjct: 72  QRIPPEIANFMELVELDVSRNDIMEIPESISFCSALQVADFSGNPLTRLPESFPKLRNLT 131

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L ++   L+ +PE +    +L    +    L+ LP+ L S L  +  + L  N+  + P
Sbjct: 132 CLSINDISLQVLPENIGNLANLVSLELRENLLTFLPESL-SMLHRLEELDLGNNELYSLP 190

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                    +  +  + NQ+ +IP  + S  KNL  +++ +N +  LP +LG  + L +L
Sbjct: 191 ES-IGHLVGLKDLWLDGNQLTEIPAEMGS-MKNLLCLDVSENKIERLPEELGGLLSLADL 248

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
            +  N I  L E I  L  L +L    N L  LP SIGN   L  L L ENK++SLP  I
Sbjct: 249 LVSQNLIDALPESIGKLRKLSILKADQNRLTYLPESIGNCESLTELVLTENKIQSLPRSI 308

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G LK+L       NQL SLP+ IG   +L+   V EN L  IP E+     LH L ++ N
Sbjct: 309 GKLKQLFNFNCDRNQLTSLPKEIGGCQSLNVFCVRENRLTRIPSELSQATELHVLDVSGN 368

Query: 529 TCLNNIP 535
             ++  P
Sbjct: 369 RKVHCCP 375



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 171/349 (48%), Gaps = 56/349 (16%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L +LPK+  +   L  L L  NE+  IP  + N + L  L +S N + 
Sbjct: 36  RSLEELLLDANQLRDLPKQFFHLVKLRKLGLSDNEIQRIPPEIANFMELVELDVSRNDIM 95

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQ 354
            +PE++S C  L   +  G  L+ LP+    L +LT  SIN+I+L               
Sbjct: 96  EIPESISFCSALQVADFSGNPLTRLPESFPKLRNLTCLSINDISLQ-------------- 141

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
                           +P  I + A NL  + +++NLLT LP  L     L EL+LG N+
Sbjct: 142 ---------------VLPENIGNLA-NLVSLELRENLLTFLPESLSMLHRLEELDLGNNE 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +  L E I +LV L+ L L  N L ++P+ +G+++ L CLD+ ENK+E LP E+G L  L
Sbjct: 186 LYSLPESIGHLVGLKDLWLDGNQLTEIPAEMGSMKNLLCLDVSENKIERLPEELGGLLSL 245

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN------ 528
             L++  N + +LP +IG L  LS L   +N L  +PE IG  E+L  L L +N      
Sbjct: 246 ADLLVSQNLIDALPESIGKLRKLSILKADQNRLTYLPESIGNCESLTELVLTENKIQSLP 305

Query: 529 ------------TC----LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                        C    L ++P E+  C +L +  +    L++IPSE+
Sbjct: 306 RSIGKLKQLFNFNCDRNQLTSLPKEIGGCQSLNVFCVRENRLTRIPSEL 354



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 184/403 (45%), Gaps = 54/403 (13%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +D    S+  +P  + +    LEEL L  N+L  LP Q  ++  L  LGL++N +  +P 
Sbjct: 17  IDKRHCSLLFVPDEIYRYERSLEELLLDANQLRDLPKQFFHLVKLRKLGLSDNEIQRIPP 76

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            +AN  +L  LD+  N + E+P  +   ++L++     N +  +      L NL+ LS+ 
Sbjct: 77  EIANFMELVELDVSRNDIMEIPESISFCSALQVADFSGNPLTRLPESFPKLRNLTCLSIN 136

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           D  ++ LP  +G L NLV+L+L  N L  LP+ +     L  LDL +NEL ++P+ +G+L
Sbjct: 137 DISLQVLPENIGNLANLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPESIGHL 196

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
           + L  L L  N+L  +P                          + S+ ++  + +S NK 
Sbjct: 197 VGLKDLWLDGNQLTEIPAE------------------------MGSMKNLLCLDVSENKI 232

Query: 345 TAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
              P   GG     S+  +    N ID +P  I  + + LS +    N LT LP  +G  
Sbjct: 233 ERLPEELGG---LLSLADLLVSQNLIDALPESI-GKLRKLSILKADQNRLTYLPESIGNC 288

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
             LTEL L  N+I                       + LP SIG L++L   + + N+L 
Sbjct: 289 ESLTELVLTENKI-----------------------QSLPRSIGKLKQLFNFNCDRNQLT 325

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
           SLP EIG  + L    ++ N+L  +P  +   T L  L V  N
Sbjct: 326 SLPKEIGGCQSLNVFCVRENRLTRIPSELSQATELHVLDVSGN 368



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/261 (35%), Positives = 141/261 (54%), Gaps = 2/261 (0%)

Query: 107 DLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSL 166
           D S + +T LP S  KL +L  L +    L  LP  IG + NL  L L EN LT LP+SL
Sbjct: 111 DFSGNPLTRLPESFPKLRNLTCLSINDISLQVLPENIGNLANLVSLELRENLLTFLPESL 170

Query: 167 ANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDN 226
           + L +L  LDL +N+L  LP  +  L  LK L+L  N++  +  ++  + NL  L + +N
Sbjct: 171 SMLHRLEELDLGNNELYSLPESIGHLVGLKDLWLDGNQLTEIPAEMGSMKNLLCLDVSEN 230

Query: 227 KIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           KI  LP ELG L +L  L ++ N ++ LP+ IG    L  L    N L  +P+ +GN  +
Sbjct: 231 KIERLPEELGGLLSLADLLVSQNLIDALPESIGKLRKLSILKADQNRLTYLPESIGNCES 290

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           LT L L+ N+++S+P ++ K   L  FN +   L+SLP   +    S+N   +  N+ T 
Sbjct: 291 LTELVLTENKIQSLPRSIGKLKQLFNFNCDRNQLTSLPKE-IGGCQSLNVFCVRENRLTR 349

Query: 347 YPSGGPTQFTSVYSINFEHNQ 367
            PS   +Q T ++ ++   N+
Sbjct: 350 IPSEL-SQATELHVLDVSGNR 369



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 152/289 (52%), Gaps = 5/289 (1%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+   + L+     GN L  LP     + NLTCL + + SL  L
Sbjct: 84  LVELDVSRNDIMEIPESISFCSALQVADFSGNPLTRLPESFPKLRNLTCLSINDISLQVL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  +  L  L+ L L  N + ++   I +L  L  L 
Sbjct: 144 PENIGNLANLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPESIGHLVGLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ E+P E+G +KNL+ LD++ N +E LP+E+G    L  L +  N +  +P+ +G
Sbjct: 204 LDGNQLTEIPAEMGSMKNLLCLDVSENKIERLPEELGGLLSLADLLVSQNLIDALPESIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L+   NRL  +PE++  C  L E  +    + SLP   +  L  + N    RN
Sbjct: 264 KLRKLSILKADQNRLTYLPESIGNCESLTELVLTENKIQSLPRS-IGKLKQLFNFNCDRN 322

Query: 343 KFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           + T+ P   G  Q  +V+ +    N++ +IP  + S+A  L  +++  N
Sbjct: 323 QLTSLPKEIGGCQSLNVFCV--RENRLTRIPSEL-SQATELHVLDVSGN 368



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 154/309 (49%), Gaps = 3/309 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + I  +PP +     L EL +  N +  +P  I + + L     + N LT LP+S
Sbjct: 64  LGLSDNEIQRIPPEIANFMELVELDVSRNDIMEIPESISFCSALQVADFSGNPLTRLPES 123

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
              L+ L  L +    L  LP  +  L +L  L LR N +  +   +  L  L  L + +
Sbjct: 124 FPKLRNLTCLSINDISLQVLPENIGNLANLVSLELRENLLTFLPESLSMLHRLEELDLGN 183

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP  +G L  L  L L  N L E+P E+G+   L+ LD+  N++  +P+ LG L+
Sbjct: 184 NELYSLPESIGHLVGLKDLWLDGNQLTEIPAEMGSMKNLLCLDVSENKIERLPEELGGLL 243

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L  L +S N ++++PE++ K   L+    +   L+ LP+  + +  S+  + L+ NK  
Sbjct: 244 SLADLLVSQNLIDALPESIGKLRKLSILKADQNRLTYLPES-IGNCESLTELVLTENKIQ 302

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P     +   +++ N + NQ+  +P  I    ++L+   +++N LT +P +L     L
Sbjct: 303 SLPR-SIGKLKQLFNFNCDRNQLTSLPKEI-GGCQSLNVFCVRENRLTRIPSELSQATEL 360

Query: 406 TELNLGTNQ 414
             L++  N+
Sbjct: 361 HVLDVSGNR 369



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 113/216 (52%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+++L+L ++ +T LP S+  L  LEEL L  N+L SLP  IG++  L  L L  N LT 
Sbjct: 152 NLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPESIGHLVGLKDLWLDGNQLTE 211

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  + +++ L  LD+  NK+  LP  +  L SL  L +  N I  +   I  L  LS+L
Sbjct: 212 IPAEMGSMKNLLCLDVSENKIERLPEELGGLLSLADLLVSQNLIDALPESIGKLRKLSIL 271

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
               N++  LP  +G  ++L  L L  N ++ LP+ IG    L   +   N+L ++P  +
Sbjct: 272 KADQNRLTYLPESIGNCESLTELVLTENKIQSLPRSIGKLKQLFNFNCDRNQLTSLPKEI 331

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           G   +L    +  NRL  +P  LS+   L+  +V G
Sbjct: 332 GGCQSLNVFCVRENRLTRIPSELSQATELHVLDVSG 367



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 81/149 (54%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+L LD+S++ I  LP  +  L  L +L +  N + +LP  IG +  L+ L   +N LT
Sbjct: 220 KNLLCLDVSENKIERLPEELGGLLSLADLLVSQNLIDALPESIGKLRKLSILKADQNRLT 279

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP+S+ N + L  L L  NK+  LP  + KL  L       N++ ++  +I    +L++
Sbjct: 280 YLPESIGNCESLTELVLTENKIQSLPRSIGKLKQLFNFNCDRNQLTSLPKEIGGCQSLNV 339

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHN 249
             +R+N++  +P EL +   L  LD++ N
Sbjct: 340 FCVRENRLTRIPSELSQATELHVLDVSGN 368



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 66/126 (52%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++ +L +S++ I  LP S+ KL  L  L    N+L  LP  IG   +LT L L EN + S
Sbjct: 244 SLADLLVSQNLIDALPESIGKLRKLSILKADQNRLTYLPESIGNCESLTELVLTENKIQS 303

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP S+  L+QL   +   N+L  LP  +    SL +  +R NR+  +  ++   + L +L
Sbjct: 304 LPRSIGKLKQLFNFNCDRNQLTSLPKEIGGCQSLNVFCVRENRLTRIPSELSQATELHVL 363

Query: 222 SMRDNK 227
            +  N+
Sbjct: 364 DVSGNR 369



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 44/81 (54%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E++  L L+++ I  LP S+ KL  L       N+L SLP +IG   +L    + EN LT
Sbjct: 289 ESLTELVLTENKIQSLPRSIGKLKQLFNFNCDRNQLTSLPKEIGGCQSLNVFCVRENRLT 348

Query: 161 SLPDSLANLQQLRVLDLRHNK 181
            +P  L+   +L VLD+  N+
Sbjct: 349 RIPSELSQATELHVLDVSGNR 369


>gi|330864711|ref|NP_001179037.2| leucine-rich repeat-containing protein 7 [Bos taurus]
 gi|296489182|tpg|DAA31295.1| TPA: leucine rich repeat containing 7 [Bos taurus]
          Length = 1537

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 192/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 24  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALKKLSIPDNDLSN 83

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    +   L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 144 YLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 201

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 202 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 238 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGN 297

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 298 LSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 356

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 357 LEFLPEEIGQMQKLRVLNLSDNRLKNLP 384



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 198/416 (47%), Gaps = 27/416 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 17  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALKKLSI 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L++LP ++A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 77  PDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 136

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 196

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+ +P ++ K   L   ++    + ++ D  +S   ++
Sbjct: 197 SELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETV-DMDISGCEAL 255

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                    D I  G+    K L+ + + DN LT 
Sbjct: 256 EDLLLSSNMLQQLP--------------------DSI--GLL---KKLTTLKVDDNQLTI 290

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    L E +   N++  L   I  L +L  L +  N L +LP  IG+ + +  +
Sbjct: 291 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
            L  NKLE LP EIG +++L+ L L  N+L +LP +   L  L+ L + +N  +++
Sbjct: 351 SLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 180/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 93  NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 152

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 153 LPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLREL 212

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 213 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 272

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 273 GLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPS---------------- 316

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                             +I + H               +L  + + +N L  LP ++G+
Sbjct: 317 ------------------TIGYLH---------------SLRTLAVDENFLPELPREIGS 343

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 344 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 403

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 404 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 433


>gi|196010173|ref|XP_002114951.1| hypothetical protein TRIADDRAFT_28844 [Trichoplax adhaerens]
 gi|190582334|gb|EDV22407.1| hypothetical protein TRIADDRAFT_28844 [Trichoplax adhaerens]
          Length = 426

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/372 (33%), Positives = 205/372 (55%), Gaps = 5/372 (1%)

Query: 158 SLTSLPDSLANLQQ-LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           SL+++PD +  L + L  L+L  N++ ELP   ++L  L+ L L  N IK +  +I  L+
Sbjct: 21  SLSAVPDQIYRLHRCLEELNLDANQIQELPPQFFRLLKLRNLSLEDNEIKRLPMEISSLT 80

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
            L  L++R N+I ++P  +   ++L TL+L+ N +E LP  I     L  L L    +V 
Sbjct: 81  KLVELNLRQNEIYDIPEAIRFCRSLNTLNLSSNPVERLPDSITQLRNLTYLMLNDISIVE 140

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +PD +G+L+NLT L    N ++ +P+++ +   L   ++    +  LPD L  SL  +  
Sbjct: 141 LPDDIGSLVNLTVLEARENYIKVLPKSICELTVLERLDLGANEIQELPDSL-GSLLHLKE 199

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L  N+    P+    + +++ SI+   N ++ +P  I    +NL+ + +  NLL  LP
Sbjct: 200 LLLDTNQIKKLPTS-IGRLSNLESIDLSENCVESLPDEI-GNVRNLTDLLLSSNLLQFLP 257

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +G    L+ L L  N+I ++S  I  L++L  LVL+ N LK+LP +IG L K+  L+ 
Sbjct: 258 SSIGKLRNLSMLKLDINRIEEISATIGGLMSLTELVLTENCLKQLPGTIGKLGKMNNLNA 317

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
           ++N L S+P+EIG    L  L L+ N L  LP  IG L  L+ L V  N L+S+P  +  
Sbjct: 318 DKNFLTSIPSEIGNCTNLTVLSLRDNHLDHLPSQIGKLKKLTVLDVCGNRLESLPITVAQ 377

Query: 517 LENLHTLYLNDN 528
           L N+  ++L++N
Sbjct: 378 L-NVKAIWLSEN 388



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/382 (31%), Positives = 207/382 (54%), Gaps = 5/382 (1%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           I ++D S  S++ +P  + +L   LEEL L  N++  LP Q   +  L  L L +N +  
Sbjct: 12  IESVDKSHCSLSAVPDQIYRLHRCLEELNLDANQIQELPPQFFRLLKLRNLSLEDNEIKR 71

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +++L +L  L+LR N++ ++P  +    SL  L L  N ++ +   I  L NL+ L
Sbjct: 72  LPMEISSLTKLVELNLRQNEIYDIPEAIRFCRSLNTLNLSSNPVERLPDSITQLRNLTYL 131

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + D  I ELP ++G L NL  L+   N+++ LPK I   T+L  LDL  NE+  +PD L
Sbjct: 132 MLNDISIVELPDDIGSLVNLTVLEARENYIKVLPKSICELTVLERLDLGANEIQELPDSL 191

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G+L++L  L L  N+++ +P ++ +  +L   ++    + SLPD  + ++ ++ ++ LS 
Sbjct: 192 GSLLHLKELLLDTNQIKKLPTSIGRLSNLESIDLSENCVESLPDE-IGNVRNLTDLLLSS 250

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N     PS    +  ++  +  + N+I++I   I     +L+++ + +N L  LP  +G 
Sbjct: 251 NLLQFLPS-SIGKLRNLSMLKLDINRIEEISATI-GGLMSLTELVLTENCLKQLPGTIGK 308

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +  LN   N ++ +  +I N  NL VL L +N L  LPS IG L+KL  LD+  N+L
Sbjct: 309 LGKMNNLNADKNFLTSIPSEIGNCTNLTVLSLRDNHLDHLPSQIGKLKKLTVLDVCGNRL 368

Query: 462 ESLPNEIGFLKELQRLILQSNQ 483
           ESLP  +  L  ++ + L  NQ
Sbjct: 369 ESLPITVAQLN-VKAIWLSENQ 389



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 124/390 (31%), Positives = 191/390 (48%), Gaps = 28/390 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D  H  L+ +P  +Y+L   L+ L L  N+I+ + P    L  L  LS+ DN+I
Sbjct: 10  RQIESVDKSHCSLSAVPDQIYRLHRCLEELNLDANQIQELPPQFFRLLKLRNLSLEDNEI 69

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LP E+  L  LV L+L  N + ++P+ I  C  L TL+L  N +  +PD +  L NLT
Sbjct: 70  KRLPMEISSLTKLVELNLRQNEIYDIPEAIRFCRSLNTLNLSSNPVERLPDSITQLRNLT 129

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   +  +P+ +   V+L         +  LP  +   LT +  + L  N+    P
Sbjct: 130 YLMLNDISIVELPDDIGSLVNLTVLEARENYIKVLPKSI-CELTVLERLDLGANEIQELP 188

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
               +          + NQI K+P  I  R  NL  +++ +N + SLP            
Sbjct: 189 DSLGSLLHLKEL-LLDTNQIKKLPTSI-GRLSNLESIDLSENCVESLP------------ 234

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
                      ++I N+ NL  L+LS+NLL+ LPSSIG LR L  L L+ N++E +   I
Sbjct: 235 -----------DEIGNVRNLTDLLLSSNLLQFLPSSIGKLRNLSMLKLDINRIEEISATI 283

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G L  L  L+L  N L  LP  IG L  ++ L+  +N L SIP EIG   NL  L L DN
Sbjct: 284 GGLMSLTELVLTENCLKQLPGTIGKLGKMNNLNADKNFLTSIPSEIGNCTNLTVLSLRDN 343

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+++P ++     L ++ +    L  +P
Sbjct: 344 H-LDHLPSQIGKLKKLTVLDVCGNRLESLP 372



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 169/344 (49%), Gaps = 50/344 (14%)

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L++  N+I+ELPP+   L  L  L L  N ++ LP EI + T LV L+L+ NE+ + 
Sbjct: 36  LEELNLDANQIQELPPQFFRLLKLRNLSLEDNEIKRLPMEISSLTKLVELNLRQNEIYD- 94

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
                                 +PE +  C  LN  N+    +  LPD +          
Sbjct: 95  ----------------------IPEAIRFCRSLNTLNLSSNPVERLPDSI---------- 122

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
                          TQ  ++  +      I ++P  I S   NL+ +  ++N +  LP 
Sbjct: 123 ---------------TQLRNLTYLMLNDISIVELPDDIGSLV-NLTVLEARENYIKVLPK 166

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
            +     L  L+LG N+I +L + + +L++L+ L+L  N +KKLP+SIG L  L+ +DL 
Sbjct: 167 SICELTVLERLDLGANEIQELPDSLGSLLHLKELLLDTNQIKKLPTSIGRLSNLESIDLS 226

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
           EN +ESLP+EIG ++ L  L+L SN L  LP +IG L NLS L +  N ++ I   IG L
Sbjct: 227 ENCVESLPDEIGNVRNLTDLLLSSNLLQFLPSSIGKLRNLSMLKLDINRIEEISATIGGL 286

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            +L  L L +N CL  +P  +     +  ++ D   L+ IPSEI
Sbjct: 287 MSLTELVLTEN-CLKQLPGTIGKLGKMNNLNADKNFLTSIPSEI 329


>gi|456864237|gb|EMF82646.1| leucine rich repeat protein [Leptospira weilii serovar Topaz str.
           LT2116]
          Length = 348

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/320 (36%), Positives = 169/320 (52%), Gaps = 3/320 (0%)

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
           +   +Q  S + +L +   ++  LP E+G  +NL  L L  N L  +PKEIG    L TL
Sbjct: 9   LEKSLQNPSEVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETL 68

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
            L  N L  IP+ +  L NL  L L  N L+++P  + K  +L E N+ G  L+ LP  +
Sbjct: 69  ILAENILKTIPNEIEQLQNLGTLDLYENELKALPNEIGKLENLKELNLSGNQLTVLPPSI 128

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
              L ++  + L RN+    P        S+  +N   N+I  +P  I S+  NL  +++
Sbjct: 129 -GQLQNLEILELLRNQLATLPEE-IVGLKSLQILNLFENEIKSLPKEI-SQLSNLIWLDL 185

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
             N +  L LD      L  LNL  N++     DI  L +LE L L+ N  K LP  I  
Sbjct: 186 GKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQ 245

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           L  L+ L+L  N+L SLP  IG L++L+ L L+ N+L +LP+ IGHL  L  L + +N L
Sbjct: 246 LENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIGHLRGLKILRLEQNRL 305

Query: 508 QSIPEEIGTLENLHTLYLND 527
            +IPEEIG+L+NL  LYL D
Sbjct: 306 TAIPEEIGSLQNLKELYLQD 325



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/354 (33%), Positives = 182/354 (51%), Gaps = 26/354 (7%)

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           ++L  SL N  ++R+LD+   +L  LP  +    +L+ L L  NR+  +  +I  L NL 
Sbjct: 7   SNLEKSLQNPSEVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLE 66

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L + +N ++ +P E+ +L+NL TLDL  N L+ LP EIG    L  L+L  N+L  +P 
Sbjct: 67  TLILAENILKTIPNEIEQLQNLGTLDLYENELKALPNEIGKLENLKELNLSGNQLTVLPP 126

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +G L NL  L L  N+L ++PE +     L   N+    + SLP  +            
Sbjct: 127 SIGQLQNLEILELLRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEI------------ 174

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
                        +Q +++  ++   N+I ++    F R +NL  +N+ DN L + P D+
Sbjct: 175 -------------SQLSNLIWLDLGKNKIKRLSLD-FKRLQNLKSLNLLDNKLENFPADI 220

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
                L  LNL  N+   L E+I  L NL+VL L+ N L  LP  IG L KL+ L LE N
Sbjct: 221 VQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGN 280

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           +L +LP  IG L+ L+ L L+ N+L ++P  IG L NL  L + + N  S  EE
Sbjct: 281 RLTTLPKGIGHLRGLKILRLEQNRLTAIPEEIGSLQNLKELYLQDFNSFSEKEE 334



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 166/305 (54%), Gaps = 3/305 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD+S   +  LP  +    +LE+L L+GN+L ++P +IG + NL  L LAEN L ++P+ 
Sbjct: 22  LDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETLILAENILKTIPNE 81

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L  LDL  N+L  LP  + KL +LK L L  N++  + P I  L NL +L +  
Sbjct: 82  IEQLQNLGTLDLYENELKALPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELLR 141

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+  LK+L  L+L  N ++ LPKEI   + L+ LDL  N++  +      L 
Sbjct: 142 NQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQ 201

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+LE+ P  + +   L   N+       LP+ +L  L ++  + L+ N+ T
Sbjct: 202 NLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEIL-QLENLQVLELTGNQLT 260

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P  G  +   + S+  E N++  +P GI    + L  + ++ N LT++P ++G+   L
Sbjct: 261 SLPE-GIGRLEKLESLFLEGNRLTTLPKGI-GHLRGLKILRLEQNRLTAIPEEIGSLQNL 318

Query: 406 TELNL 410
            EL L
Sbjct: 319 KELYL 323



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/264 (35%), Positives = 146/264 (55%), Gaps = 3/264 (1%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L L+++ +  +P  +E+L +L  L LY N+L +LP++IG + NL  L L+ N LT 
Sbjct: 64  NLETLILAENILKTIPNEIEQLQNLGTLDLYENELKALPNEIGKLENLKELNLSGNQLTV 123

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP S+  LQ L +L+L  N+L  LP  +  L SL+IL L  N IK++  +I  LSNL  L
Sbjct: 124 LPPSIGQLQNLEILELLRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWL 183

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  NKI+ L  +   L+NL +L+L  N LE  P +I     L  L+L +N    +P+ +
Sbjct: 184 DLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEI 243

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L L+ N+L S+PE + +   L    +EG  L++LP G +  L  +  + L +
Sbjct: 244 LQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKG-IGHLRGLKILRLEQ 302

Query: 342 NKFTAYPS--GGPTQFTSVYSINF 363
           N+ TA P   G       +Y  +F
Sbjct: 303 NRLTAIPEEIGSLQNLKELYLQDF 326



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 128/221 (57%), Gaps = 5/221 (2%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  L+LS + +T LPPS+ +L +LE L L  N+LA+LP +I  + +L  L L EN 
Sbjct: 107 KLENLKELNLSGNQLTVLPPSIGQLQNLEILELLRNQLATLPEEIVGLKSLQILNLFENE 166

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           + SLP  ++ L  L  LDL  NK+  L +   +L +LK L L  N+++    DI  L +L
Sbjct: 167 IKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSL 226

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++  N+ + LP E+ +L+NL  L+L  N L  LP+ IG    L +L L+ N L  +P
Sbjct: 227 EFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLP 286

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLS-----KCVHLNEFN 314
             +G+L  L  LRL  NRL ++PE +      K ++L +FN
Sbjct: 287 KGIGHLRGLKILRLEQNRLTAIPEEIGSLQNLKELYLQDFN 327



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 131/225 (58%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL ++ +  LP  + KL +L+EL L GN+L  LP  IG + NL  L L  N L 
Sbjct: 86  QNLGTLDLYENELKALPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELLRNQLA 145

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  L+ L++L+L  N++  LP  + +L++L  L L  N+IK +  D + L NL  
Sbjct: 146 TLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKS 205

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++ DNK+   P ++ +LK+L  L+L +N  + LP+EI     L  L+L  N+L ++P+ 
Sbjct: 206 LNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEG 265

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
           +G L  L  L L  NRL ++P+ +     L    +E   L+++P+
Sbjct: 266 IGRLEKLESLFLEGNRLTTLPKGIGHLRGLKILRLEQNRLTAIPE 310



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 102/158 (64%), Gaps = 1/158 (0%)

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           L +LP ++GT+  L +L L  N+++ + ++I  L NLE L+L+ N+LK +P+ I  L+ L
Sbjct: 29  LETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETLILAENILKTIPNEIEQLQNL 88

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
             LDL EN+L++LPNEIG L+ L+ L L  NQL  LP +IG L NL  L +  N L ++P
Sbjct: 89  GTLDLYENELKALPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELLRNQLATLP 148

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
           EEI  L++L  L L +N  + ++P E++  SNL  + L
Sbjct: 149 EEIVGLKSLQILNLFENE-IKSLPKEISQLSNLIWLDL 185



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 155/314 (49%), Gaps = 30/314 (9%)

Query: 248 HNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKC 307
           H++LE   K + N + +  LD+   EL  +P+ +G   NL +L L  NRL ++P+ + K 
Sbjct: 6   HSNLE---KSLQNPSEVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKL 62

Query: 308 VHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQ 367
            +L    +    L ++P+ +   L ++  + L  N+  A P                 N+
Sbjct: 63  RNLETLILAENILKTIPNEI-EQLQNLGTLDLYENELKALP-----------------NE 104

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
           I K+        +NL ++N+  N LT LP  +G    L  L L  NQ++ L E+I  L +
Sbjct: 105 IGKL--------ENLKELNLSGNQLTVLPPSIGQLQNLEILELLRNQLATLPEEIVGLKS 156

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           L++L L  N +K LP  I  L  L  LDL +NK++ L  +   L+ L+ L L  N+L + 
Sbjct: 157 LQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENF 216

Query: 488 PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIM 547
           P  I  L +L +L++  N  + +PEEI  LENL  L L  N  L ++P  +     L+ +
Sbjct: 217 PADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQ-LTSLPEGIGRLEKLESL 275

Query: 548 SLDNCPLSQIPSEI 561
            L+   L+ +P  I
Sbjct: 276 FLEGNRLTTLPKGI 289



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 2/208 (0%)

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
           F ++  +    N++  IP  I  + +NL  + + +N+L ++P ++     L  L+L  N+
Sbjct: 39  FQNLEKLILFGNRLTAIPKEI-GKLRNLETLILAENILKTIPNEIEQLQNLGTLDLYENE 97

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +  L  +I  L NL+ L LS N L  LP SIG L+ L+ L+L  N+L +LP EI  LK L
Sbjct: 98  LKALPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELLRNQLATLPEEIVGLKSL 157

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           Q L L  N++ SLP+ I  L+NL +L +G+N ++ +  +   L+NL +L L DN  L N 
Sbjct: 158 QILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNK-LENF 216

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEIV 562
           P ++    +L+ ++L+      +P EI+
Sbjct: 217 PADIVQLKSLEFLNLNYNRFKILPEEIL 244


>gi|169260661|gb|ACA52057.1| densin 11-N6 [Rattus norvegicus]
          Length = 533

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 192/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 29  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSS 88

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 89  LPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 148

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 149 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 206

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 207 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 242

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 243 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 302

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+    L  N  
Sbjct: 303 LSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVTSLRSNK- 361

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 362 LEFLPEEIGQMQRLRVLNLSDNRLKNLP 389



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 194/416 (46%), Gaps = 27/416 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 22  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSI 81

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L+SLP S+A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 82  PDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 141

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 142 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 201

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+ +P ++ K   L   ++    + ++ D  +S   ++
Sbjct: 202 SELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETV-DMDISGCEAL 260

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                         G+    K L+ + + DN LT 
Sbjct: 261 EDLLLSSNMLQQLPDS----------------------IGLL---KKLTTLKVDDNQLTM 295

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    L E +   N++  L   I  L +L  L +  N L +LP  IG+ + +   
Sbjct: 296 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVT 355

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
            L  NKLE LP EIG ++ L+ L L  N+L +LP +   L  L+ L + +N  +++
Sbjct: 356 SLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 411



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 174/368 (47%), Gaps = 51/368 (13%)

Query: 218 LSMLSMRDNKIRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           +S+L      ++++P E+    + L  L L  N +EELPK++ NC  L  L +  N+L +
Sbjct: 29  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSS 88

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  + +L+NL  L +S N ++  PE +  C  L         +S LPDG          
Sbjct: 89  LPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF--------- 139

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
                           TQ  ++  +      ++ +P   F R   L  + +++N L +LP
Sbjct: 140 ----------------TQLLNLTQLYLNDAFLEFLPAN-FGRLVKLRILELRENHLKTLP 182

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +     L  L+LG N+ S+L E +  + NL  L + NN L+ LP SIG L+ L  LD+
Sbjct: 183 KSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 242

Query: 457 EENKLES-----------------------LPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
            +N++E+                       LP+ IG LK+L  L +  NQL  LP  IG+
Sbjct: 243 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 302

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L+ L       N L+S+P  IG L +L TL +++N  L  +P E+  C N+ + SL +  
Sbjct: 303 LSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENF-LPELPREIGSCKNVTVTSLRSNK 361

Query: 554 LSQIPSEI 561
           L  +P EI
Sbjct: 362 LEFLPEEI 369



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 69/128 (53%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L +  + +T LP ++  L+ LEE     N+L SLP  IGY+ +L  L + EN L  LP  
Sbjct: 286 LKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPRE 345

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + + + + V  LR NKL  LP  + ++  L++L L  NR+K +      L  L+ L + D
Sbjct: 346 IGSCKNVTVTSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSD 405

Query: 226 NKIRELPP 233
           N+ + L P
Sbjct: 406 NQSKALIP 413


>gi|195504035|ref|XP_002098907.1| GE23676 [Drosophila yakuba]
 gi|194185008|gb|EDW98619.1| GE23676 [Drosophila yakuba]
          Length = 1857

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T ++N+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLSNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T LS L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 211/435 (48%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F  C  + +  +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LG
Sbjct: 8   FKGCNRQ-VEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLG 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  + N + L  LD+  N + ++P  +  L SL++     N I  +     
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL++L + D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + ++P  LG L  L  L L +N+L+ +P  L                     GLL+ LT 
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPEL---------------------GLLTKLTY 225

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           ++   +S N+    P                 N+I     G+ S    L+ +++  NLL 
Sbjct: 226 LD---VSENRLEELP-----------------NEIS----GLVS----LTDLDLAQNLLE 257

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP  +     LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  
Sbjct: 258 ALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLSN 317

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+++ N LE LP EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  
Sbjct: 318 LNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYS 377

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  ++L++N
Sbjct: 378 LVNLQ-LKAVWLSEN 391



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 192/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L+ LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|194907948|ref|XP_001981667.1| GG11485 [Drosophila erecta]
 gi|190656305|gb|EDV53537.1| GG11485 [Drosophila erecta]
          Length = 1855

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/364 (33%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T ++N+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMTKLSNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ +L  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + +Q LIL  N L  LP +IG +T LS L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKRLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 211/435 (48%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F  C  + +  +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LG
Sbjct: 8   FKGCNRQ-VEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLG 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  + N + L  LD+  N + ++P  +  L SL++     N I  +     
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL++L + D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           + ++P  LG L  L  L L +N+L+ +P  L                     GLL+ LT 
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPEL---------------------GLLTKLTY 225

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           ++   +S N+    P                 N+I     G+ S    L+ +++  NLL 
Sbjct: 226 LD---VSENRLEELP-----------------NEIS----GLVS----LTDLDLAQNLLE 257

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP  +     LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  
Sbjct: 258 ALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLSN 317

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+++ N LE LP EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  
Sbjct: 318 LNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYS 377

Query: 514 IGTLENLHTLYLNDN 528
           +  L+ L  ++L++N
Sbjct: 378 LVNLQ-LKAVWLSEN 391



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 192/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L+ LN+  N +  L  +I    NL VL L +N LK+LP  +GN   
Sbjct: 301 FLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|169260657|gb|ACA52055.1| densin 11-17 [Rattus norvegicus]
          Length = 447

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 193/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 29  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSS 88

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 89  LPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 148

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 149 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPE- 206

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 207 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 242

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 243 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 302

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 303 LSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSRKNVTVMSLRSNK- 361

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 362 LEFLPEEIGQMQRLRVLNLSDNRLKNLP 389



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 195/416 (46%), Gaps = 27/416 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 22  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSI 81

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L+SLP S+A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 82  PDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 141

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 142 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 201

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P++L  + NL  L +  N L+ +P ++ K   L   ++    + ++ D  +S   ++
Sbjct: 202 SELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETV-DMDISGCEAL 260

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                         G+    K L+ + + DN LT 
Sbjct: 261 EDLLLSSNMLQQLPDS----------------------IGLL---KKLTTLKVDDNQLTM 295

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    L E +   N++  L   I  L +L  L +  N L +LP  IG+ + +  +
Sbjct: 296 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSRKNVTVM 355

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
            L  NKLE LP EIG ++ L+ L L  N+L +LP +   L  L+ L + +N  +++
Sbjct: 356 SLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 411



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 70/128 (54%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L +  + +T LP ++  L+ LEE     N+L SLP  IGY+ +L  L + EN L  LP  
Sbjct: 286 LKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPRE 345

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + + + + V+ LR NKL  LP  + ++  L++L L  NR+K +      L  L+ L + D
Sbjct: 346 IGSRKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSD 405

Query: 226 NKIRELPP 233
           N+ + L P
Sbjct: 406 NQSKALIP 413


>gi|348555513|ref|XP_003463568.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like [Cavia porcellus]
          Length = 559

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 218/446 (48%), Gaps = 39/446 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E++  + L  + +  +   ++ L H+  LYL  N L  L  ++G ++NL  L L+ N L 
Sbjct: 48  EDLEEVHLENNRLEEISQDIQHLRHIRILYLDRNNLRELCPELGALSNLEGLDLSCNPLN 107

Query: 161 SLPDSL---ANLQQLRVLDLRHNKLNELPMVVYKLT------------------------ 193
             P SL   + L+ LR L L H  L ELP+VV K                          
Sbjct: 108 --PSSLQVLSGLRALRELRLYHLDLRELPVVVCKHLHHLELLGLSRNCLEALPKEIVNQL 165

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
            L+ +YL+ N+ K    ++  L NL ++ + +NK+R LP E+G+L  L  L +AHN L  
Sbjct: 166 KLREIYLQQNQFKVFPQELCVLPNLEIIDLDENKLRALPEEIGDLTRLQKLYVAHNQLPS 225

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LP+ +  C  +  L++ HN L ++P   G L  +T L LS N L  VP  + +   L+  
Sbjct: 226 LPRSLCRCRKMTVLEVSHNLLDSLPCAPGELPRMTELGLSGNCLGKVPRLVCRWPALHLL 285

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP- 372
            +    L  L       L  +  + L +N+   +P         + ++  + N I ++P 
Sbjct: 286 YLRDAGLRGLRRS-FGRLLQLRFLDLGQNQLDRFPP-QICALKDLEALALDDNNIGQLPS 343

Query: 373 -YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS---EDIQNLVNL 428
             G+ S+ K L    +  N   S P ++ +   L +L +G +Q SKLS   E I  L NL
Sbjct: 344 ELGLLSKLKILG---LTGNQFLSFPEEVFSLASLEKLYIGQDQGSKLSRLPEQIGKLQNL 400

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           + L + NN L+ LP S+G++ KL+ LD   N L+ LP+EI   + L+ L+L+ N L  LP
Sbjct: 401 KELYIENNSLEYLPVSLGSMPKLEVLDCRHNLLKQLPDEICQAQGLRELLLEDNLLTCLP 460

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEI 514
             +  L NL  L++  N +++ P E+
Sbjct: 461 ENLDSLENLKVLTLMNNPMKAPPIEV 486



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 136/477 (28%), Positives = 204/477 (42%), Gaps = 82/477 (17%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
            +D  +  L  +P  +  L  L+ ++L  NR++ +  DIQ+L ++ +L +  N +REL P
Sbjct: 29  FIDTSNRNLTAIPPEILALEDLEEVHLENNRLEEISQDIQHLRHIRILYLDRNNLRELCP 88

Query: 234 ELGELKNLVTLDLA---------------------------------------------- 247
           ELG L NL  LDL+                                              
Sbjct: 89  ELGALSNLEGLDLSCNPLNPSSLQVLSGLRALRELRLYHLDLRELPVVVCKHLHHLELLG 148

Query: 248 --HNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
              N LE LPKEI N   L  + LQ N+    P  L  L NL  + L  N+L ++PE + 
Sbjct: 149 LSRNCLEALPKEIVNQLKLREIYLQQNQFKVFPQELCVLPNLEIIDLDENKLRALPEEIG 208

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
               L +  V    L SLP  L      +  + +S N   + P   P +   +  +    
Sbjct: 209 DLTRLQKLYVAHNQLPSLPRSLCRC-RKMTVLEVSHNLLDSLPCA-PGELPRMTELGLSG 266

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           N + K+P  +  R   L  + ++D  L  L    G  + L  L+LG NQ+ +    I  L
Sbjct: 267 NCLGKVPR-LVCRWPALHLLYLRDAGLRGLRRSFGRLLQLRFLDLGQNQLDRFPPQICAL 325

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN-------------------------- 459
            +LE L L +N + +LPS +G L KLK L L  N                          
Sbjct: 326 KDLEALALDDNNIGQLPSELGLLSKLKILGLTGNQFLSFPEEVFSLASLEKLYIGQDQGS 385

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           KL  LP +IG L+ L+ L +++N L  LP ++G +  L  L    N L+ +P+EI   + 
Sbjct: 386 KLSRLPEQIGKLQNLKELYIENNSLEYLPVSLGSMPKLEVLDCRHNLLKQLPDEICQAQG 445

Query: 520 LHTLYLNDN--TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
           L  L L DN  TCL   P  L    NL++++L N P+   P E+   G   + RYL+
Sbjct: 446 LRELLLEDNLLTCL---PENLDSLENLKVLTLMNNPMKAPPIEVCAQGNEAMWRYLR 499



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 169/351 (48%), Gaps = 52/351 (14%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+  +DL ++ +  LP  +  LT L++LY+  N+L SLP  +     +T L ++ N
Sbjct: 185 CVLPNLEIIDLDENKLRALPEEIGDLTRLQKLYVAHNQLPSLPRSLCRCRKMTVLEVSHN 244

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L SLP +   L ++  L L  N L ++P +V +  +L +LYLR   ++ +      L  
Sbjct: 245 LLDSLPCAPGELPRMTELGLSGNCLGKVPRLVCRWPALHLLYLRDAGLRGLRRSFGRLLQ 304

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N++   PP++  LK+L  L L  N++ +LP E+G  + L  L L  N+ ++ 
Sbjct: 305 LRFLDLGQNQLDRFPPQICALKDLEALALDDNNIGQLPSELGLLSKLKILGLTGNQFLSF 364

Query: 278 PDMLGNLINLTRLRLSYN---RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           P+ + +L +L +L +  +   +L  +PE + K  +L E  +E  +L  LP     SL S+
Sbjct: 365 PEEVFSLASLEKLYIGQDQGSKLSRLPEQIGKLQNLKELYIENNSLEYLP----VSLGSM 420

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +                     ++  HN + ++P  I  +A+ L ++ ++DNLLT 
Sbjct: 421 PKLEV---------------------LDCRHNLLKQLPDEI-CQAQGLRELLLEDNLLTC 458

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           LP                       E++ +L NL+VL L NN +K  P  +
Sbjct: 459 LP-----------------------ENLDSLENLKVLTLMNNPMKAPPIEV 486


>gi|298241193|ref|ZP_06965000.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297554247|gb|EFH88111.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 349

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 163/294 (55%), Gaps = 5/294 (1%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N++ LD+S   +T +P  + +L  L+ELYL+GN+L  +P+++G + +L  L LA N L  
Sbjct: 32  NLITLDISDKGLTQVPAELGQLRSLQELYLFGNQLREVPAELGQLRSLQELYLAGNQLRE 91

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  L  L+ L+ L L  N+L  +P  + +L  L+ LYL  N+++ V  ++  L +L ML
Sbjct: 92  VPAELGQLRSLQELYLSGNQLTGIPTELGQLRGLQELYLSGNQLREVPTELGQLRDLHML 151

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++RE+P ELG+L++L  LDL+ N L E+P E+G  + L  L L  N+L  +P  L
Sbjct: 152 DLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLEKLYLAGNQLREVPAEL 211

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  L  L LS N+L  VP  L +   L E ++ G  L+ +P   L  L  + ++ L+ 
Sbjct: 212 GQLRGLQELYLSGNQLREVPTELGQLRDLQELDLSGNQLTGIPTE-LGQLCGLQDLYLAG 270

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIP--YGIFSRAKNLSKVNMKDNLLT 393
           N+    P+    Q   ++ ++   NQ+ ++P   G  SR      +   D LLT
Sbjct: 271 NQLREVPA-ELGQLRDLHMLDLSGNQLREVPAELGQLSRLHAFC-IEDNDQLLT 322



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 174/355 (49%), Gaps = 28/355 (7%)

Query: 197 ILYLRFNRIKTVHPDIQY--LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           I+ L  +  K +  D++Y  L NL  L + D  + ++P ELG+L++L  L L  N L E+
Sbjct: 10  IVELLISIYKVIPNDVKYDDLGNLITLDISDKGLTQVPAELGQLRSLQELYLFGNQLREV 69

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P E+G    L  L L  N+L  +P  LG L +L  L LS N+L  +P  L +   L E  
Sbjct: 70  PAELGQLRSLQELYLAGNQLREVPAELGQLRSLQELYLSGNQLTGIPTELGQLRGLQELY 129

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           + G  L  +P  L                          Q   ++ ++   NQ+ ++P  
Sbjct: 130 LSGNQLREVPTEL-------------------------GQLRDLHMLDLSGNQLREVP-A 163

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
              + ++L  +++  N L  +P +LG    L +L L  NQ+ ++  ++  L  L+ L LS
Sbjct: 164 ELGQLRDLHMLDLSGNQLREVPAELGQLSRLEKLYLAGNQLREVPAELGQLRGLQELYLS 223

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
            N L+++P+ +G LR L+ LDL  N+L  +P E+G L  LQ L L  NQL  +P  +G L
Sbjct: 224 GNQLREVPTELGQLRDLQELDLSGNQLTGIPTELGQLCGLQDLYLAGNQLREVPAELGQL 283

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
            +L  L +  N L+ +P E+G L  LH   + DN  L   P E+     + I++ 
Sbjct: 284 RDLHMLDLSGNQLREVPAELGQLSRLHAFCIEDNDQLLTPPSEIVSQGTIAILTF 338



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 137/283 (48%), Gaps = 30/283 (10%)

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           D LGNLI L    +S   L  VP  L +   L E  + G  L  +P  L           
Sbjct: 28  DDLGNLITLD---ISDKGLTQVPAELGQLRSLQELYLFGNQLREVPAEL----------- 73

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
                          Q  S+  +    NQ+ ++P     + ++L ++ +  N LT +P +
Sbjct: 74  --------------GQLRSLQELYLAGNQLREVP-AELGQLRSLQELYLSGNQLTGIPTE 118

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           LG   GL EL L  NQ+ ++  ++  L +L +L LS N L+++P+ +G LR L  LDL  
Sbjct: 119 LGQLRGLQELYLSGNQLREVPTELGQLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSG 178

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           N+L  +P E+G L  L++L L  NQL  +P  +G L  L  L +  N L+ +P E+G L 
Sbjct: 179 NQLREVPAELGQLSRLEKLYLAGNQLREVPAELGQLRGLQELYLSGNQLREVPTELGQLR 238

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +L  L L+ N  L  IP EL     LQ + L    L ++P+E+
Sbjct: 239 DLQELDLSGNQ-LTGIPTELGQLCGLQDLYLAGNQLREVPAEL 280



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 99/173 (57%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS + +  +P  + +L  L  L L GN+L  +P+++G ++ L  L LA N L  +P  
Sbjct: 151 LDLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLEKLYLAGNQLREVPAE 210

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L  L+ L+ L L  N+L E+P  + +L  L+ L L  N++  +  ++  L  L  L +  
Sbjct: 211 LGQLRGLQELYLSGNQLREVPTELGQLRDLQELDLSGNQLTGIPTELGQLCGLQDLYLAG 270

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
           N++RE+P ELG+L++L  LDL+ N L E+P E+G  + L    ++ N+ +  P
Sbjct: 271 NQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLHAFCIEDNDQLLTP 323



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 70/126 (55%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L+ + +  +P  + +L  L+ELYL GN+L  +P+++G + +L  L L+ N LT +P  L 
Sbjct: 199 LAGNQLREVPAELGQLRGLQELYLSGNQLREVPTELGQLRDLQELDLSGNQLTGIPTELG 258

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
            L  L+ L L  N+L E+P  + +L  L +L L  N+++ V  ++  LS L    + DN 
Sbjct: 259 QLCGLQDLYLAGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLHAFCIEDND 318

Query: 228 IRELPP 233
               PP
Sbjct: 319 QLLTPP 324


>gi|51092111|gb|AAT94469.1| RE02389p [Drosophila melanogaster]
          Length = 1756

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 176/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDD 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +  +NN+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELP-ASIGQMIKLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ KL  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 195/385 (50%), Gaps = 16/385 (4%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGP--TQFTSVYSINFEHNQIDKIP--YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
              P       ++ +  +HNQ+ ++P   G+ ++   L+ +++ +N L  LP ++   V 
Sbjct: 192 ---PYLGYLPGLHELWLDHNQLQRLPPELGLLTK---LTYLDVSENRLEELPNEISGLVS 245

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LT+L+L  N +  L +DI  L  L +L L  N L++L  ++GN   ++ L L EN L  L
Sbjct: 246 LTDLDLAQNLLEALPDDIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSEL 305

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P  IG + +L  L +  N L  LP  IG   NL  LS+ +N L+ +P E+G    LH L 
Sbjct: 306 PASIGQMIKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLD 365

Query: 525 LNDNTCLNNIPFELALCSNLQIMSL 549
           ++ N  L  +P+ L    NLQ+ ++
Sbjct: 366 VSGNQLL-YLPYSLV---NLQLKAV 386



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 191/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L +L L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPD     
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPD----D 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++        +N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCENMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G  + L  LN+  N +  L  +I    NL VL L +N LKKLP  +GN   
Sbjct: 301 FLSELPASIGQMIKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 156/361 (43%), Gaps = 51/361 (14%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           + L  L L  NH+ +LPK       L  L L  NE+  +P  + N  NL  L +S N + 
Sbjct: 37  RTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIP 96

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
            +P+ +     L   +     +  LP G  S L ++  + L+    T  P+         
Sbjct: 97  DIPDDIKHLQSLQVADFSSNPIPKLPSGF-SQLKNLTVLGLNDMSLTTLPAD-------- 147

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
                            F     L  + +++NLL  LP  +     L  L+LG N+I  L
Sbjct: 148 -----------------FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDL 190

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
              +  L  L  L L +N L++LP  +G L KL  LD+ EN+LE LPNEI  L  L  L 
Sbjct: 191 PPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLD 250

Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN---------- 528
           L  N L +LP  I  L+ L+ L + +N LQ + + +G  EN+  L L +N          
Sbjct: 251 LAQNLLEALPDDIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIG 310

Query: 529 ------------TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
                         L  +P E+  C+NL ++SL +  L ++P E+   G   ++  L + 
Sbjct: 311 QMIKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPEL---GNCTVLHVLDVS 367

Query: 577 G 577
           G
Sbjct: 368 G 368


>gi|340713138|ref|XP_003395105.1| PREDICTED: protein lap4-like isoform 1 [Bombus terrestris]
 gi|340713140|ref|XP_003395106.1| PREDICTED: protein lap4-like isoform 2 [Bombus terrestris]
 gi|340713144|ref|XP_003395108.1| PREDICTED: protein lap4-like isoform 4 [Bombus terrestris]
          Length = 1599

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 195/394 (49%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L  +P  + + + SL+ L L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEYIDKRHCSLPCVPDDILRYSRSLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P+ I N   L   D   N +  +P     L NLT
Sbjct: 73  HRLPPDIQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L SLP+ L S L  +  + L  N     P
Sbjct: 133 VLGLNDMSLTNLPPDFGSLEALQSLELRENLLKSLPESL-SQLYKLERLDLGDNDIEVLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
           +                  I K+P         L ++ +  N L  LP ++G    L  L
Sbjct: 192 A-----------------HIGKLPA--------LQELWLDHNQLQHLPPEIGELKTLACL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++  L E+I  L +L  L LS N+++KLP  +G L+KL  L +++N+L +L + I
Sbjct: 227 DVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKLTILKVDQNRLSTLNSNI 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + LQ LIL  N L+ LP  IG L NL+ L+V  N+LQS+P EIG L+ L  L L DN
Sbjct: 287 GRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P E+  C+ L ++ +    L  +P  ++
Sbjct: 347 K-LQYLPIEVGQCTALHVLDVSGNRLQYLPYSLI 379



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 172/336 (51%), Gaps = 27/336 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P +++ L  L+      N +  LP+    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L+ L+ L+LR N L  LP  + +L  L+ L L  N I+ +   I  L  L  
Sbjct: 143 NLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPE+GELK L  LD++ N LE+LP+EIG    L  L L  N +  +PD 
Sbjct: 203 LWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           LG L  LT L++  NRL ++   + +C +L E  +    L  LP   +  L ++NN+ + 
Sbjct: 263 LGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELP-VTIGKLHNLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN   + P+                              K L  ++++DN L  LP+++G
Sbjct: 322 RNSLQSLPTE-------------------------IGNLKQLGVLSLRDNKLQYLPIEVG 356

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
               L  L++  N++  L   + NL NL+ + LS N
Sbjct: 357 QCTALHVLDVSGNRLQYLPYSLINL-NLKAVWLSKN 391



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 169/358 (47%), Gaps = 26/358 (7%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  + I  LP +  +L  L +L L  N++  LP  I    NL  L ++ N +  +P+++ 
Sbjct: 44  LDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDIPENIK 103

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
           NL+ L+V D   N +  LP    +L +L +L L    +  + PD   L  L  L +R+N 
Sbjct: 104 NLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENL 163

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           ++ LP  L +L  L  LDL  N +E LP  IG    L  L L HN+L ++P  +G L  L
Sbjct: 164 LKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGELKTL 223

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L +S NRLE +PE +     L + ++    +  LPDG L  L  +  + + +N+ +  
Sbjct: 224 ACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDG-LGELQKLTILKVDQNRLSTL 282

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
            S                            R +NL ++ + +N L  LP+ +G    L  
Sbjct: 283 NSN-------------------------IGRCENLQELILTENFLLELPVTIGKLHNLNN 317

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
           LN+  N +  L  +I NL  L VL L +N L+ LP  +G    L  LD+  N+L+ LP
Sbjct: 318 LNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLP 375


>gi|455789506|gb|EMF41432.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 358

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/312 (35%), Positives = 176/312 (56%), Gaps = 3/312 (0%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L + + K++ LP ++G+LKNL  LDL+ N L  LPKEI     L  L L +N+L  
Sbjct: 28  DVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTT 87

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
            P  +  L +L +L LS N+L  +P  + +  +L E N+    L ++   +   L ++  
Sbjct: 88  FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEI-EQLKNLQK 146

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L  N+ TA  S    +  ++ S+   +NQ+   P  I  + +NL ++ + +N LT+ P
Sbjct: 147 LYLDNNQLTAL-SKEIGKLQNLKSLFLSNNQLTTFPKEI-GKLQNLQELYLSNNQLTTFP 204

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  L LG NQ++ +  +I  L  L+ L L  N L  +P  IG L+ L+ L L
Sbjct: 205 KEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFL 264

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+ +++P E G LK L+ L L +NQL +LP+ IG L NL  L++  N L +IP+EIG 
Sbjct: 265 SYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQ 324

Query: 517 LENLHTLYLNDN 528
           L+NL TLYL +N
Sbjct: 325 LQNLQTLYLRNN 336



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/322 (35%), Positives = 178/322 (55%), Gaps = 8/322 (2%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
            +++L L   ++K +   I  L NL ML + DN++  LP E+ +LKNL  L L +N L  
Sbjct: 28  DVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTT 87

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
            PKEI     L  L L +N+L  +P  +G L NL  L L  N+L+++ + + +  +L + 
Sbjct: 88  FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKL 147

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKI 371
            ++   L++L   +   L ++ ++ LS N+ T +P   G       +Y     +NQ+   
Sbjct: 148 YLDNNQLTALSKEI-GKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELY---LSNNQLTTF 203

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  + + L  + + DN LT++P ++G    L ELNL  NQ++ + ++I  L NL+VL
Sbjct: 204 PKEI-GKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVL 262

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            LS N  K +P   G L+ LK L L+ N+L +LP EIG LK L+ L L +NQL ++P+ I
Sbjct: 263 FLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEI 322

Query: 492 GHLTNLSYLSVGENNLQSIPEE 513
           G L NL  L +  N L SI E+
Sbjct: 323 GQLQNLQTLYLRNNQL-SIEEK 343



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/319 (35%), Positives = 171/319 (53%), Gaps = 27/319 (8%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            L L+   L+ LP++IG    L  LDL  N+L+ +P  +  L NL  L L+YN+L + P+
Sbjct: 31  VLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPK 90

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + +                        L S++ + LS N+ T  P     Q  ++  +N
Sbjct: 91  EIEQ------------------------LKSLHKLYLSNNQLTILPVE-IGQLQNLQELN 125

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQ+  I   I  + KNL K+ + +N LT+L  ++G    L  L L  NQ++   ++I
Sbjct: 126 LWNNQLKTISKEI-EQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEI 184

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NL+ L LSNN L   P  IG L+KL+ L L +N+L ++PNEIG L++LQ L L  N
Sbjct: 185 GKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVN 244

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL ++P+ IG L NL  L +  N  ++IP E G L+NL  L L+ N  L  +P E+    
Sbjct: 245 QLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQ-LTALPKEIGKLK 303

Query: 543 NLQIMSLDNCPLSQIPSEI 561
           NL++++LD   L+ IP EI
Sbjct: 304 NLKMLNLDANQLTTIPKEI 322



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 114/176 (64%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+ +L LS + +T  P  + KL +L+ELYL  N+L + P +IG +  L  LGL +N 
Sbjct: 163 KLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQ 222

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT++P+ +  LQ+L+ L+L  N+L  +P  + +L +L++L+L +N+ KT+  +   L NL
Sbjct: 223 LTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNL 282

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
            MLS+  N++  LP E+G+LKNL  L+L  N L  +PKEIG    L TL L++N+L
Sbjct: 283 KMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQL 338



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 143/268 (53%), Gaps = 2/268 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L+ + +T  P  +E+L  L +LYL  N+L  LP +IG + NL  L L  N L 
Sbjct: 73  KNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLK 132

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++   +  L+ L+ L L +N+L  L   + KL +LK L+L  N++ T   +I  L NL  
Sbjct: 133 TISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQE 192

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++   P E+G+L+ L  L L  N L  +P EIG    L  L+L  N+L  IP  
Sbjct: 193 LYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKE 252

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LSYN+ +++P    +  +L   +++   L++LP   +  L ++  + L 
Sbjct: 253 IGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE-IGKLKNLKMLNLD 311

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQI 368
            N+ T  P     Q  ++ ++   +NQ+
Sbjct: 312 ANQLTTIPK-EIGQLQNLQTLYLRNNQL 338



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 122/221 (55%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + +  +   +E+L +L++LYL  N+L +L  +IG + NL  L L+ N LT
Sbjct: 119 QNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLT 178

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           + P  +  LQ L+ L L +N+L   P  + KL  L+ L L  N++ T+  +I  L  L  
Sbjct: 179 TFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQE 238

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  N++  +P E+G+L+NL  L L++N  + +P E G    L  L L  N+L  +P  
Sbjct: 239 LNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE 298

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
           +G L NL  L L  N+L ++P+ + +  +L    +    LS
Sbjct: 299 IGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQLS 339



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 83/144 (57%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L++  QN +++ VL+LS   LK LP  IG L+ L+ LDL +N+L  LP EI  LK LQ L
Sbjct: 19  LTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 78

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L  NQL + P+ I  L +L  L +  N L  +P EIG L+NL  L L +N  L  I  E
Sbjct: 79  FLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQ-LKTISKE 137

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    NLQ + LDN  L+ +  EI
Sbjct: 138 IEQLKNLQKLYLDNNQLTALSKEI 161



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 70/123 (56%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  +  N   ++ L L E KL+ LP +IG LK LQ L L  NQL+ LP+ I  L NL 
Sbjct: 17  RDLTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQ 76

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N L + P+EI  L++LH LYL++N  L  +P E+    NLQ ++L N  L  I 
Sbjct: 77  ELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQ-LTILPVEIGQLQNLQELNLWNNQLKTIS 135

Query: 559 SEI 561
            EI
Sbjct: 136 KEI 138


>gi|24216019|ref|NP_713500.1| hypothetical protein LA_3320 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075100|ref|YP_005989419.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24197247|gb|AAN50518.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458891|gb|AER03436.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 377

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 125/367 (34%), Positives = 185/367 (50%), Gaps = 49/367 (13%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N  ++RVLDL   +L  LP+ + KL +L+ LYL +N++                
Sbjct: 38  LTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTV-------------- 83

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
                    LP E+ +LKNL  L L  N L  LP EI     L  LDL  N+L  +P  +
Sbjct: 84  ---------LPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTILPQEI 134

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L L  NRL ++ + + +  +L   ++    L++LP+ +   L ++ ++ LS 
Sbjct: 135 EQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEI-EQLKNLKSLYLSE 193

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P                             + +NL  + + +N +T LP ++  
Sbjct: 194 NQFATFPKE-------------------------IGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L L  NQ+  L ++I+ L NL+ L LS N L  LP  +G L  L+ LDL  N+L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
           ++LP EI  LK LQ L L +NQL  LP+ IG L NL +LS+  N L ++P EI  L+NL 
Sbjct: 289 KTLPKEIEQLKNLQTLFLNNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQ 348

Query: 522 TLYLNDN 528
           TLYLN+N
Sbjct: 349 TLYLNNN 355



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/331 (34%), Positives = 181/331 (54%), Gaps = 26/331 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + KL +L+ LYL+ N+L  LP +I  + NL  L L  N LT+LP+ 
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VLDL  N+L  LP  + +L +L++LYL  NR+ T+  DI+ L NL  L + +
Sbjct: 111 IEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+ +LKNL +L L+ N     PKEIG    L  L L +N++  +P+ +  L 
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLK 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LS N+L ++P+ + +                        L ++  + LS N+ T
Sbjct: 231 KLQYLYLSDNQLITLPKEIEQ------------------------LKNLQTLDLSYNQLT 266

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++ +++  +NQ+  +P  I  + KNL  + + +N LT LP ++G    L
Sbjct: 267 ILPKEV-GQLENLQTLDLRNNQLKTLPKEI-EQLKNLQTLFLNNNQLTILPQEIGKLKNL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
             L+L  NQ++ L  +I+ L NL+ L L+NN
Sbjct: 325 LWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 155/309 (50%), Gaps = 27/309 (8%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  LDL   EL  +P  +G L NL RL L YN+L  +P+ + +  +L  
Sbjct: 37  DLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQL 96

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
             +    L++LP+ +   L ++  + L  N+ T  P                        
Sbjct: 97  LYLRSNRLTTLPNEI-EQLKNLQVLDLGSNQLTILPQE---------------------- 133

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
                + KNL  + +  N LT+L  D+     L  L+L  NQ++ L  +I+ L NL+ L 
Sbjct: 134 ---IEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 190

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           LS N     P  IG L+ LK L L  N++  LPNEI  LK+LQ L L  NQL++LP+ I 
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIE 250

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L +  N L  +P+E+G LENL TL L +N  L  +P E+    NLQ + L+N 
Sbjct: 251 QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLNNN 309

Query: 553 PLSQIPSEI 561
            L+ +P EI
Sbjct: 310 QLTILPQEI 318



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/264 (34%), Positives = 152/264 (57%), Gaps = 1/264 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  +E+L +L+ LYL+ N+L +L   I  + NL  L L+ N LT
Sbjct: 115 KNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  L+ L+ L L  N+    P  + +L +LK+L+L  N+I  +  +I  L  L  
Sbjct: 175 TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQY 234

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN++  LP E+ +LKNL TLDL++N L  LPKE+G    L TLDL++N+L  +P  
Sbjct: 235 LYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L+ N+L  +P+ + K  +L   ++    L++LP+  +  L ++  + L+
Sbjct: 295 IEQLKNLQTLFLNNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNE-IEQLKNLQTLYLN 353

Query: 341 RNKFTAYPSGGPTQFTSVYSINFE 364
            N+F++       +      I+FE
Sbjct: 354 NNQFSSQEKKRIRKLLPKCQISFE 377



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N  +++ LDL   +L++LP EIG LK LQRL L  NQL  LP+ I  L NL 
Sbjct: 36  RDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 95

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N L ++P EI  L+NL  L L  N  L  +P E+    NLQ++ L +  L+ + 
Sbjct: 96  LLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQ-LTILPQEIEQLKNLQLLYLHSNRLTTLS 154

Query: 559 SEI 561
            +I
Sbjct: 155 KDI 157


>gi|418741977|ref|ZP_13298350.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410750335|gb|EKR07315.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 379

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/333 (35%), Positives = 174/333 (52%), Gaps = 26/333 (7%)

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           +IL L  +++ T+  +I  L NL  L +  N++  LP E+G+L+NL  LDL  N L  LP
Sbjct: 51  RILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILP 110

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
           KEIG    L  L+L  N L  +PD +G L NL  L L  N+L  +PE + +  +L   N 
Sbjct: 111 KEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNS 170

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
           +G  L++ P  +   L  +  + L  N+ T                              
Sbjct: 171 QGNQLTTFPKEI-GQLQKLQELNLGFNRLTTLREE------------------------- 204

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             + +NL  +++  N LT+LP ++G    L +L L  NQ++ L E+I  L  L+ L L N
Sbjct: 205 VVQLQNLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGN 264

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N L+ LP  I  L+KL+ L LE N++ + P EIG L+ LQ L L  NQL +LP+ IG L 
Sbjct: 265 NPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQ 324

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           NL  L++  N L ++P+E+G L+ L  L L +N
Sbjct: 325 NLQELNLEFNQLATLPKEVGQLQKLRKLNLYNN 357



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/323 (33%), Positives = 175/323 (54%), Gaps = 5/323 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS S +  L   + KL +L++LYL  N+L +LP++IG + NL  L L  N LT LP  
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+VL+L  N+L  LP  V +L +L++L L  N++  +   I  L NL +L+ + 
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQG 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++   P E+G+L+ L  L+L  N L  L +E+     L  LDL  N L  +P  +G L 
Sbjct: 173 NQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLS 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L +L L  N+L ++PE + +   L E  +    L +LP   +  L  +  + L  N+ T
Sbjct: 233 KLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKE-IEQLQKLQTLYLEGNQIT 291

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P     Q  ++  +N   NQ+  +P  I  + +NL ++N++ N L +LP ++G    L
Sbjct: 292 TFPK-EIGQLQNLQELNLGFNQLTTLPQEI-GQLQNLQELNLEFNQLATLPKEVGQLQKL 349

Query: 406 TELNLGTNQISKLSEDIQNLVNL 428
            +LNL  N I+  SE I+ +  L
Sbjct: 350 RKLNLYNNPIA--SEKIERIRKL 370



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 120/335 (35%), Positives = 173/335 (51%), Gaps = 31/335 (9%)

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           R L   L   K+   L+L+ + L  L KEIG    L  L L +N+L  +P+ +G L NL 
Sbjct: 38  RNLTEALQNPKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQ 97

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTA 346
            L L  N L  +P+ + K  +L   N+    L+ LPD  G L +L  +N   L  NK T 
Sbjct: 98  VLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLN---LDLNKLTI 154

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P                    +KI      + +NL  +N + N LT+ P ++G    L 
Sbjct: 155 LP--------------------EKI-----GQLQNLQILNSQGNQLTTFPKEIGQLQKLQ 189

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
           ELNLG N+++ L E++  L NL++L L +N L  LP  IG L KL+ L L  N+L +LP 
Sbjct: 190 ELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPE 249

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
           EIG LK+LQ L L +N L +LP+ I  L  L  L +  N + + P+EIG L+NL  L L 
Sbjct: 250 EIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLG 309

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  L  +P E+    NLQ ++L+   L+ +P E+
Sbjct: 310 FNQ-LTTLPQEIGQLQNLQELNLEFNQLATLPKEV 343



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/296 (33%), Positives = 161/296 (54%), Gaps = 3/296 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L L+ + +T LP  + +L +L+ L LY N+L  LP +IG + NL  L L  N 
Sbjct: 69  KLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNR 128

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT LPD +  LQ L+VL+L  NKL  LP  + +L +L+IL  + N++ T   +I  L  L
Sbjct: 129 LTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKL 188

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++  N++  L  E+ +L+NL  LDL  N L  LPKEIG  + L  L L  N+L  +P
Sbjct: 189 QELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLP 248

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           + +G L  L  L L  N L ++P+ + +   L    +EG  +++ P   +  L ++  + 
Sbjct: 249 EEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKE-IGQLQNLQELN 307

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
           L  N+ T  P     Q  ++  +N E NQ+  +P  +  + + L K+N+ +N + S
Sbjct: 308 LGFNQLTTLPQ-EIGQLQNLQELNLEFNQLATLPKEV-GQLQKLRKLNLYNNPIAS 361


>gi|258545585|ref|ZP_05705819.1| small GTP-binding protein [Cardiobacterium hominis ATCC 15826]
 gi|258519285|gb|EEV88144.1| small GTP-binding protein [Cardiobacterium hominis ATCC 15826]
          Length = 430

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 123/374 (32%), Positives = 197/374 (52%), Gaps = 29/374 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS   +  LP ++ +L  L EL L GN+L SLP+ IG ++ L  L L  N L +LPDS
Sbjct: 57  LDLSFRRLQSLPETLGELALLTELDLRGNELKSLPASIGDLSLLRRLDLKWNQLETLPDS 116

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
            A L  L  L+L +NK+  LP V+            FN I             + L + D
Sbjct: 117 FAKLTGLTKLELGYNKMTSLPEVLTA----------FNHI-------------TELDLSD 153

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  +P  LG    L  L+LA N LE LP    N T L  L+L  NEL  +PD + N  
Sbjct: 154 NRLLRVPLFLGNFTRLTKLNLARNKLENLPPVCANLTQLTRLNLSGNELKQLPDFIANFS 213

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L+ L +S N+L S+PE + +   L+  ++ G  L++LP+  L  L +++ + +  N+ T
Sbjct: 214 QLSELEISGNQLGSLPEYIGRLKELHHLDISGNMLTTLPET-LGDLQNLSILDIHNNRLT 272

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P+        ++ ++  HNQ+  +P    ++ + L+ +++  N L  LP  +  +  L
Sbjct: 273 SLPANF-GNLGQLHRLSLAHNQLSLLPPPA-AQMQRLAVLDLSHNRLMQLPNFICQFSHL 330

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            +L+LG N++++L +DI  L  LEVL +++N +  LP S+ NL K+  LDL   ++  LP
Sbjct: 331 NDLHLGYNELTELPDDIGLLTELEVLNIAHNNIGALPPSVANLTKMTRLDLSSTQIPYLP 390

Query: 466 NEIGFLKELQRLIL 479
               F+  L RL +
Sbjct: 391 K---FISNLNRLCI 401



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 200/401 (49%), Gaps = 28/401 (6%)

Query: 139 LPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL 198
           +P +   +  L  L L+   L SLP++L  L  L  LDLR N+L  LP  +  L+ L+ L
Sbjct: 44  IPREPSELIGLNRLDLSFRRLQSLPETLGELALLTELDLRGNELKSLPASIGDLSLLRRL 103

Query: 199 YLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
            L++N+++T+      L+ L+ L +  NK+  LP  L    ++  LDL+ N L  +P  +
Sbjct: 104 DLKWNQLETLPDSFAKLTGLTKLELGYNKMTSLPEVLTAFNHITELDLSDNRLLRVPLFL 163

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
           GN T L  L+L  N+L N+P +  NL  LTRL LS N L+ +P+ ++    L+E  + G 
Sbjct: 164 GNFTRLTKLNLARNKLENLPPVCANLTQLTRLNLSGNELKQLPDFIANFSQLSELEISGN 223

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
            L SLP+  +  L  ++++ +S N  T  P                              
Sbjct: 224 QLGSLPE-YIGRLKELHHLDISGNMLTTLPE-------------------------TLGD 257

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
            +NLS +++ +N LTSLP + G    L  L+L  NQ+S L      +  L VL LS+N L
Sbjct: 258 LQNLSILDIHNNRLTSLPANFGNLGQLHRLSLAHNQLSLLPPPAAQMQRLAVLDLSHNRL 317

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
            +LP+ I     L  L L  N+L  LP++IG L EL+ L +  N + +LP ++ +LT ++
Sbjct: 318 MQLPNFICQFSHLNDLHLGYNELTELPDDIGLLTELEVLNIAHNNIGALPPSVANLTKMT 377

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
            L +    +  +P+ I  L  L  L + +      IP  LA
Sbjct: 378 RLDLSSTQIPYLPKFISNLNRLCILDVRNTRM--KIPLALA 416



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 182/340 (53%), Gaps = 6/340 (1%)

Query: 225 DNKIRE--LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           DN I E  +P E  EL  L  LDL+   L+ LP+ +G   +L  LDL+ NEL ++P  +G
Sbjct: 36  DNNIGEDRIPREPSELIGLNRLDLSFRRLQSLPETLGELALLTELDLRGNELKSLPASIG 95

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
           +L  L RL L +N+LE++P++ +K   L +  +    ++SLP+ +L++   I  + LS N
Sbjct: 96  DLSLLRRLDLKWNQLETLPDSFAKLTGLTKLELGYNKMTSLPE-VLTAFNHITELDLSDN 154

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
           +    P      FT +  +N   N+++ +P  + +    L+++N+  N L  LP  +  +
Sbjct: 155 RLLRVPLF-LGNFTRLTKLNLARNKLENLP-PVCANLTQLTRLNLSGNELKQLPDFIANF 212

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
             L+EL +  NQ+  L E I  L  L  L +S N+L  LP ++G+L+ L  LD+  N+L 
Sbjct: 213 SQLSELEISGNQLGSLPEYIGRLKELHHLDISGNMLTTLPETLGDLQNLSILDIHNNRLT 272

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
           SLP   G L +L RL L  NQL  LP     +  L+ L +  N L  +P  I    +L+ 
Sbjct: 273 SLPANFGNLGQLHRLSLAHNQLSLLPPPAAQMQRLAVLDLSHNRLMQLPNFICQFSHLND 332

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           L+L  N  L  +P ++ L + L+++++ +  +  +P  + 
Sbjct: 333 LHLGYNE-LTELPDDIGLLTELEVLNIAHNNIGALPPSVA 371



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 180/383 (46%), Gaps = 30/383 (7%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P   + L  L  LDL   +L  LP  + +L  L  L LR N +K++   I  LS L  L
Sbjct: 44  IPREPSELIGLNRLDLSFRRLQSLPETLGELALLTELDLRGNELKSLPASIGDLSLLRRL 103

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            ++ N++  LP    +L  L  L+L +N +  LP+ +     +  LDL  N L+ +P  L
Sbjct: 104 DLKWNQLETLPDSFAKLTGLTKLELGYNKMTSLPEVLTAFNHITELDLSDNRLLRVPLFL 163

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           GN   LT+L L+ N+LE++P   +    L   N+ G  L  LPD                
Sbjct: 164 GNFTRLTKLNLARNKLENLPPVCANLTQLTRLNLSGNELKQLPD---------------- 207

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
             F A        F+ +  +    NQ+  +P  I  R K L  +++  N+LT+LP  LG 
Sbjct: 208 --FIA-------NFSQLSELEISGNQLGSLPEYI-GRLKELHHLDISGNMLTTLPETLGD 257

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L+ L++  N+++ L  +  NL  L  L L++N L  LP     +++L  LDL  N+L
Sbjct: 258 LQNLSILDIHNNRLTSLPANFGNLGQLHRLSLAHNQLSLLPPPAAQMQRLAVLDLSHNRL 317

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
             LPN I     L  L L  N+L  LP  IG LT L  L++  NN+ ++P  +  L  + 
Sbjct: 318 MQLPNFICQFSHLNDLHLGYNELTELPDDIGLLTELEVLNIAHNNIGALPPSVANLTKMT 377

Query: 522 TLYLNDNTCLNNIPFELALCSNL 544
            L L+       IP+     SNL
Sbjct: 378 RLDLSS----TQIPYLPKFISNL 396



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 123/247 (49%), Gaps = 1/247 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           +I  LDLS + +  +P  +   T L +L L  NKL +LP     +T LT L L+ N L  
Sbjct: 145 HITELDLSDNRLLRVPLFLGNFTRLTKLNLARNKLENLPPVCANLTQLTRLNLSGNELKQ 204

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LPD +AN  QL  L++  N+L  LP  + +L  L  L +  N + T+   +  L NLS+L
Sbjct: 205 LPDFIANFSQLSELEISGNQLGSLPEYIGRLKELHHLDISGNMLTTLPETLGDLQNLSIL 264

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + +N++  LP   G L  L  L LAHN L  LP        L  LDL HN L+ +P+ +
Sbjct: 265 DIHNNRLTSLPANFGNLGQLHRLSLAHNQLSLLPPPAAQMQRLAVLDLSHNRLMQLPNFI 324

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
               +L  L L YN L  +P+ +     L   N+    + +LP   +++LT +  + LS 
Sbjct: 325 CQFSHLNDLHLGYNELTELPDDIGLLTELEVLNIAHNNIGALPPS-VANLTKMTRLDLSS 383

Query: 342 NKFTAYP 348
            +    P
Sbjct: 384 TQIPYLP 390


>gi|418670524|ref|ZP_13231895.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|418725048|ref|ZP_13283724.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|418729740|ref|ZP_13288287.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|421121420|ref|ZP_15581717.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|409961430|gb|EKO25175.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|410345854|gb|EKO96924.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410753906|gb|EKR15564.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410775918|gb|EKR55909.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 423

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 129/358 (36%), Positives = 192/358 (53%), Gaps = 4/358 (1%)

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L L F  +KT+   I  L NL  L +  N+   L  E+ +LK+L  L+L +N L  LPKE
Sbjct: 46  LDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKE 105

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           IG    L  L L  NELVN+P  +G   NL +L L  N+L  +P+ + +  +L E ++  
Sbjct: 106 IGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLS 165

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             L SLP  +   L S+ N+ L+ N+FT   S       ++ +++   N++  IP  I  
Sbjct: 166 NKLISLPTEI-EQLKSLKNLDLNHNEFTTV-SKEVMLLETLENLDLRSNKLKTIPKEI-R 222

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           + K+L  + +  N LTSLP ++     L  LNLG N+      +I  L NL  L L  N 
Sbjct: 223 QLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQ 282

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L + P  +G L+ LK L L  N++ +LP E+  L +LQ L L  N++  LP+ I  L NL
Sbjct: 283 LVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNL 342

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            +LS+  N L ++P+EIG L+ L  L L +N  L  +P E+    NLQ + LD+ P+S
Sbjct: 343 EWLSLSNNKLNALPKEIGQLKKLQRLELGNNQ-LTTLPKEIEQLKNLQRLELDSNPIS 399



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 129/381 (33%), Positives = 198/381 (51%), Gaps = 26/381 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++ NLDLS   +  L   + +L +L++L L GN+   L  +I  + +L  L L  N LT 
Sbjct: 42  DVRNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTV 101

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  LQ L+ L L  N+L  LP  + +  +L+ L L  N++  +  +I  L NL  L
Sbjct: 102 LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQEL 161

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           S+  NK+  LP E+ +LK+L  LDL HN    + KE+     L  LDL+ N+L  IP  +
Sbjct: 162 SLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEI 221

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L +L  L L+ N+L S+P+ + +  +L   N                        L  
Sbjct: 222 RQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLN------------------------LGE 257

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P         +    + +NQ+ + P  +  + K+L  +++  N +T+LP+++  
Sbjct: 258 NRFQIFPVEILELKNLLELNLY-YNQLVEFPKEV-GQLKSLKYLSLYHNQITTLPVEVTQ 315

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L EL+L  N+I+ L ++I  L NLE L LSNN L  LP  IG L+KL+ L+L  N+L
Sbjct: 316 LPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQL 375

Query: 462 ESLPNEIGFLKELQRLILQSN 482
            +LP EI  LK LQRL L SN
Sbjct: 376 TTLPKEIEQLKNLQRLELDSN 396



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 189/370 (51%), Gaps = 26/370 (7%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L +L ++IG + NL  L L  N  T L   +  L+ L+ L+L +NKL  LP  + +L +L
Sbjct: 53  LKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           + L L  N +  +  +I    NL  L++ +NK+  LP E+G+L+NL  L L  N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
            EI     L  LDL HNE   +   +  L  L  L L  N+L+++P+ + +   L    +
Sbjct: 173 TEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
            G  L+SLP  +   L ++  + L  N+F  +P         +    + +NQ+ + P  +
Sbjct: 233 TGNQLTSLPKEI-EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY-YNQLVEFPKEV 290

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             + K+L  +++  N +T+LP+++     L EL+L  N+I+ L ++I  L NLE L LSN
Sbjct: 291 -GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSN 349

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N                       KL +LP EIG LK+LQRL L +NQL +LP+ I  L 
Sbjct: 350 N-----------------------KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK 386

Query: 496 NLSYLSVGEN 505
           NL  L +  N
Sbjct: 387 NLQRLELDSN 396



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 160/290 (55%), Gaps = 3/290 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L  + + +LP  + +  +L++L L  NKL  LP +IG + NL  L L  N L 
Sbjct: 110 QNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLI 169

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP  +  L+ L+ LDL HN+   +   V  L +L+ L LR N++KT+  +I+ L +L +
Sbjct: 170 SLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKV 229

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+ +L+NL TL+L  N  +  P EI     L+ L+L +N+LV  P  
Sbjct: 230 LMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKE 289

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L +L  L L +N++ ++P  +++   L E ++ G  ++ LP  +L  L ++  ++LS
Sbjct: 290 VGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEIL-QLKNLEWLSLS 348

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
            NK  A P     Q   +  +   +NQ+  +P  I  + KNL ++ +  N
Sbjct: 349 NNKLNALPK-EIGQLKKLQRLELGNNQLTTLPKEI-EQLKNLQRLELDSN 396



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 186/360 (51%), Gaps = 8/360 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  +  T L   + +L  L++L L  NKL  LP +IG + NL  L L  N L 
Sbjct: 64  KNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELV 123

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +   + L+ L+L +NKL  LP  + +L +L+ L L  N++ ++  +I+ L +L  
Sbjct: 124 NLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKN 183

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+   +  E+  L+ L  LDL  N L+ +PKEI     L  L L  N+L ++P  
Sbjct: 184 LDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKE 243

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  NR +  P  + +  +L E N+    L   P   +  L S+  ++L 
Sbjct: 244 IEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKE-VGQLKSLKYLSLY 302

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P    TQ   +  ++   N+I  +P  I  + KNL  +++ +N L +LP ++G
Sbjct: 303 HNQITTLPV-EVTQLPDLQELHLSGNKITILPKEIL-QLKNLEWLSLSNNKLNALPKEIG 360

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL--KC-LDLE 457
               L  L LG NQ++ L ++I+ L NL+ L L +N +   P     +RKL  KC +D E
Sbjct: 361 QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKLLPKCEIDFE 418



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 174/334 (52%), Gaps = 27/334 (8%)

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           ++ L  ++G+LKNL  LDL  N    L KEI     L  L+L +N+L  +P  +G L NL
Sbjct: 53  LKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L L  N L ++P+ + +  +L + N++   L+ LP  +   L ++  ++L  NK  + 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEI-GQLQNLQELSLLSNKLISL 171

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
           P+    Q  S+ +++  HN+   +   +               LL +L            
Sbjct: 172 PTE-IEQLKSLKNLDLNHNEFTTVSKEVM--------------LLETL----------EN 206

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           L+L +N++  + ++I+ L +L+VL+L+ N L  LP  I  L+ LK L+L EN+ +  P E
Sbjct: 207 LDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVE 266

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
           I  LK L  L L  NQLV  P+ +G L +L YLS+  N + ++P E+  L +L  L+L+ 
Sbjct: 267 ILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSG 326

Query: 528 NTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N  +  +P E+    NL+ +SL N  L+ +P EI
Sbjct: 327 NK-ITILPKEILQLKNLEWLSLSNNKLNALPKEI 359



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 120/243 (49%), Gaps = 32/243 (13%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           NLDL+ +  T +   V  L  LE L L  NKL ++P +I  + +L  L L  N LTSLP 
Sbjct: 183 NLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPK 242

Query: 165 SLANLQQLRVLDL-----------------------RHNKLNELPMVVYKLTSLKILYLR 201
            +  LQ L+ L+L                        +N+L E P  V +L SLK L L 
Sbjct: 243 EIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLY 302

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N+I T+  ++  L +L  L +  NKI  LP E+ +LKNL  L L++N L  LPKEIG  
Sbjct: 303 HNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL-----ESVPETLSKCVHLNEFNVE 316
             L  L+L +N+L  +P  +  L NL RL L  N +     E + + L KC    E + E
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISPKEKERIRKLLPKC----EIDFE 418

Query: 317 GCA 319
           G  
Sbjct: 419 GGG 421



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 155/310 (50%), Gaps = 27/310 (8%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           N+   L N  ++  L LS+  L+++   + +  +L + ++ G   + L   +   L  + 
Sbjct: 32  NLEKALQNPADVRNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQ-LKDLQ 90

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + L+ NK T  P     Q  ++  ++   N++  +P  I  + KNL K+N+ +N LT L
Sbjct: 91  KLNLNNNKLTVLPKE-IGQLQNLQELSLHSNELVNLPKEI-GQFKNLQKLNLDNNKLTVL 148

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L EL+L +N++  L  +I+ L +L+ L L++N    +   +  L  L+ LD
Sbjct: 149 PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLD 208

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ------- 508
           L  NKL+++P EI  LK L+ L+L  NQL SLP+ I  L NL  L++GEN  Q       
Sbjct: 209 LRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEIL 268

Query: 509 ----------------SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                             P+E+G L++L  L L  N  +  +P E+    +LQ + L   
Sbjct: 269 ELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ-ITTLPVEVTQLPDLQELHLSGN 327

Query: 553 PLSQIPSEIV 562
            ++ +P EI+
Sbjct: 328 KITILPKEIL 337



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           K L  ++ N   ++ LDL    L++L N+IG LK LQ+L L  N+   L + I  L +L 
Sbjct: 31  KNLEKALQNPADVRNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L++  N L  +P+EIG L+NL  L L+ N  + N+P E+    NLQ ++LDN  L+ +P
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELV-NLPKEIGQFKNLQKLNLDNNKLTVLP 149

Query: 559 SEI 561
            EI
Sbjct: 150 KEI 152


>gi|45656719|ref|YP_000805.1| hypothetical protein LIC10828 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084288|ref|ZP_15545151.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102963|ref|ZP_15563565.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599955|gb|AAS69442.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367278|gb|EKP22664.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433188|gb|EKP77536.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 378

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/312 (35%), Positives = 176/312 (56%), Gaps = 3/312 (0%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L + + K++ LP ++G+LKNL  LDL+ N L  LPKEI     L  L L +N+L  
Sbjct: 48  DVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTT 107

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
            P  +  L +L +L LS N+L  +P  + +  +L E N+    L ++   +   L ++  
Sbjct: 108 FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEI-EQLKNLQK 166

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L  N+ TA  S    +  ++ S+   +NQ+   P  I  + +NL ++ + +N LT+ P
Sbjct: 167 LYLDNNQLTAL-SKEIGKLQNLKSLFLSNNQLTTFPKEI-GKLQNLQELYLSNNQLTTFP 224

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  L LG NQ++ +  +I  L  L+ L L  N L  +P  IG L+ L+ L L
Sbjct: 225 KEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFL 284

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+ +++P E G LK L+ L L +NQL +LP+ IG L NL  L++  N L +IP+EIG 
Sbjct: 285 SYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQ 344

Query: 517 LENLHTLYLNDN 528
           L+NL TLYL +N
Sbjct: 345 LQNLQTLYLRNN 356



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 113/319 (35%), Positives = 171/319 (53%), Gaps = 27/319 (8%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            L L+   L+ LP++IG    L  LDL  N+L+ +P  +  L NL  L L+YN+L + P+
Sbjct: 51  VLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPK 110

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + +                        L S++ + LS N+ T  P     Q  ++  +N
Sbjct: 111 EIEQ------------------------LKSLHKLYLSNNQLTILPVE-IGQLQNLQELN 145

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQ+  I   I  + KNL K+ + +N LT+L  ++G    L  L L  NQ++   ++I
Sbjct: 146 LWNNQLKTISKEI-EQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEI 204

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NL+ L LSNN L   P  IG L+KL+ L L +N+L ++PNEIG L++LQ L L  N
Sbjct: 205 GKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVN 264

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           QL ++P+ IG L NL  L +  N  ++IP E G L+NL  L L+ N  L  +P E+    
Sbjct: 265 QLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQ-LTALPKEIGKLK 323

Query: 543 NLQIMSLDNCPLSQIPSEI 561
           NL++++LD   L+ IP EI
Sbjct: 324 NLKMLNLDANQLTTIPKEI 342



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 179/337 (53%), Gaps = 26/337 (7%)

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
           ++  L L+E  L  LP+ +  L+ L++LDL  N+L  LP  + +L +L+ L+L +N++ T
Sbjct: 48  DVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTT 107

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
              +I+ L +L  L + +N++  LP E+G+L+NL  L+L +N L+ + KEI     L  L
Sbjct: 108 FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKL 167

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
            L +N+L  +   +G L NL  L LS N+L + P+ + K  +L E  +    L++ P  +
Sbjct: 168 YLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI 227

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
              L  +  + L  N+ T  P                 N+I K+        + L ++N+
Sbjct: 228 -GKLQKLQWLGLGDNQLTTIP-----------------NEIGKL--------QKLQELNL 261

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
             N LT++P ++G    L  L L  NQ   +  +   L NL++L L  N L  LP  IG 
Sbjct: 262 DVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGK 321

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           L+ LK L+L+ N+L ++P EIG L+ LQ L L++NQ 
Sbjct: 322 LKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQF 358



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 169/311 (54%), Gaps = 3/311 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS+  +  LP  + +L +L+ L L  N+L  LP +I  + NL  L L  N LT+ P  
Sbjct: 52  LILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKE 111

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L  L L +N+L  LP+ + +L +L+ L L  N++KT+  +I+ L NL  L + +
Sbjct: 112 IEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDN 171

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  L  E+G+L+NL +L L++N L   PKEIG    L  L L +N+L   P  +G L 
Sbjct: 172 NQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQ 231

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L  N+L ++P  + K   L E N++   L+++P  +   L ++  + LS N+F 
Sbjct: 232 KLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEI-GQLQNLQVLFLSYNQFK 290

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++  ++ + NQ+  +P  I  + KNL  +N+  N LT++P ++G    L
Sbjct: 291 TIPVEF-GQLKNLKMLSLDANQLTALPKEI-GKLKNLKMLNLDANQLTTIPKEIGQLQNL 348

Query: 406 TELNLGTNQIS 416
             L L  NQ S
Sbjct: 349 QTLYLRNNQFS 359



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 113/176 (64%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+ +L LS + +T  P  + KL +L+ELYL  N+L + P +IG +  L  LGL +N 
Sbjct: 183 KLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQ 242

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT++P+ +  LQ+L+ L+L  N+L  +P  + +L +L++L+L +N+ KT+  +   L NL
Sbjct: 243 LTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNL 302

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
            MLS+  N++  LP E+G+LKNL  L+L  N L  +PKEIG    L TL L++N+ 
Sbjct: 303 KMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQF 358



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 134/249 (53%), Gaps = 1/249 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L+ + +T  P  +E+L  L +LYL  N+L  LP +IG + NL  L L  N L 
Sbjct: 93  KNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLK 152

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++   +  L+ L+ L L +N+L  L   + KL +LK L+L  N++ T   +I  L NL  
Sbjct: 153 TISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQE 212

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++   P E+G+L+ L  L L  N L  +P EIG    L  L+L  N+L  IP  
Sbjct: 213 LYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKE 272

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LSYN+ +++P    +  +L   +++   L++LP   +  L ++  + L 
Sbjct: 273 IGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE-IGKLKNLKMLNLD 331

Query: 341 RNKFTAYPS 349
            N+ T  P 
Sbjct: 332 ANQLTTIPK 340



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 120/222 (54%), Gaps = 7/222 (3%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           I KE  + K  N+  L L  + +T L   + KL +L+ L+L  N+L + P +IG + NL 
Sbjct: 154 ISKEIEQLK--NLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQ 211

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L+ N LT+ P  +  LQ+L+ L L  N+L  +P  + KL  L+ L L  N++ T+  
Sbjct: 212 ELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPK 271

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           +I  L NL +L +  N+ + +P E G+LKNL  L L  N L  LPKEIG    L  L+L 
Sbjct: 272 EIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLD 331

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRL-----ESVPETLSKC 307
            N+L  IP  +G L NL  L L  N+      E + + L KC
Sbjct: 332 ANQLTTIPKEIGQLQNLQTLYLRNNQFSIEEKERIRKLLPKC 373



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 125/223 (56%), Gaps = 7/223 (3%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + +  +   +E+L +L++LYL  N+L +L  +IG + NL  L L+ N LT
Sbjct: 139 QNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLT 198

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           + P  +  LQ L+ L L +N+L   P  + KL  L+ L L  N++ T+  +I  L  L  
Sbjct: 199 TFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQE 258

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  N++  +P E+G+L+NL  L L++N  + +P E G    L  L L  N+L  +P  
Sbjct: 259 LNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE 318

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHL-------NEFNVE 316
           +G L NL  L L  N+L ++P+ + +  +L       N+F++E
Sbjct: 319 IGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQFSIE 361



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 83/144 (57%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L++  QN +++ VL+LS   LK LP  IG L+ L+ LDL +N+L  LP EI  LK LQ L
Sbjct: 39  LTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 98

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L  NQL + P+ I  L +L  L +  N L  +P EIG L+NL  L L +N  L  I  E
Sbjct: 99  FLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQ-LKTISKE 157

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    NLQ + LDN  L+ +  EI
Sbjct: 158 IEQLKNLQKLYLDNNQLTALSKEI 181



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 70/123 (56%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  +  N   ++ L L E KL+ LP +IG LK LQ L L  NQL+ LP+ I  L NL 
Sbjct: 37  RDLTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQ 96

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N L + P+EI  L++LH LYL++N  L  +P E+    NLQ ++L N  L  I 
Sbjct: 97  ELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQ-LTILPVEIGQLQNLQELNLWNNQLKTIS 155

Query: 559 SEI 561
            EI
Sbjct: 156 KEI 158


>gi|421100175|ref|ZP_15560811.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796765|gb|EKR98888.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 406

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 124/363 (34%), Positives = 187/363 (51%), Gaps = 31/363 (8%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +L ++L N   + VLDL    L   P  + K  +LK L L  N++K +  +I  L NL  
Sbjct: 39  NLTEALKNPMDVGVLDLSSKLLTTFPKGIEKFQNLKHLDLSNNQLKALPKEIGQLQNLQK 98

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  N + ELP E+G+L+NL  L+L+ N L  LP+EIG    L TL + +N L  +P  
Sbjct: 99  LNVSVNNLIELPQEIGQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRLTILPKE 158

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N L S+PE + +     +  +    L++LP G L  L ++  I L 
Sbjct: 159 IGQLQNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTLPQG-LCKLQNLEQIYLH 217

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           +N+ T+ P                             + + L  + +  N LT+LP ++G
Sbjct: 218 QNRLTSLPKE-------------------------IGQLRKLWTLYLYSNELTTLPEEIG 252

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L +L+L  N ++ L ++I  L NL+ L LS+N L  +P  IG L+ LK LDL  N 
Sbjct: 253 QLQNLRQLSLKLNNLTTLPKEIGQLQNLDNLDLSDNQLTLIPKEIGQLQNLKLLDLSGNS 312

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L +LP EIG L+ L+ L L  N L +LP+ IG L NL +L+     ++ IP+ I   EN+
Sbjct: 313 LTTLPKEIGQLQNLKLLDLSGNSLTTLPKEIGQLKNLYFLA-----MKGIPDLILQKENI 367

Query: 521 HTL 523
             L
Sbjct: 368 RKL 370



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 112/335 (33%), Positives = 174/335 (51%), Gaps = 30/335 (8%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            LDL+   L   PK I     L  LDL +N+L  +P  +G L NL +L +S N L  +P+
Sbjct: 52  VLDLSSKLLTTFPKGIEKFQNLKHLDLSNNQLKALPKEIGQLQNLQKLNVSVNNLIELPQ 111

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + +  +L + N+ G  L++LP  +                          Q   + +++
Sbjct: 112 EIGQLQNLEQLNLSGNRLTTLPQEI-------------------------GQLKKLETLH 146

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +N++  +P  I  + +NL ++ +  N LTSLP ++G      +L L  NQ++ L + +
Sbjct: 147 VYYNRLTILPKEI-GQLQNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTLPQGL 205

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NLE + L  N L  LP  IG LRKL  L L  N+L +LP EIG L+ L++L L+ N
Sbjct: 206 CKLQNLEQIYLHQNRLTSLPKEIGQLRKLWTLYLYSNELTTLPEEIGQLQNLRQLSLKLN 265

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
            L +LP+ IG L NL  L + +N L  IP+EIG L+NL  L L+ N+ L  +P E+    
Sbjct: 266 NLTTLPKEIGQLQNLDNLDLSDNQLTLIPKEIGQLQNLKLLDLSGNS-LTTLPKEIGQLQ 324

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQG 577
           NL+++ L    L+ +P EI   G    + +L M+G
Sbjct: 325 NLKLLDLSGNSLTTLPKEI---GQLKNLYFLAMKG 356



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 89/224 (39%), Positives = 133/224 (59%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS + +T LP  + +L  LE L++Y N+L  LP +IG + NL  L L  NSLT
Sbjct: 117 QNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRLTILPKEIGQLQNLEELILYGNSLT 176

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP+ +  LQ+   L L  N+L  LP  + KL +L+ +YL  NR+ ++  +I  L  L  
Sbjct: 177 SLPEEIGQLQKFEKLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLTSLPKEIGQLRKLWT 236

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+L+NL  L L  N+L  LPKEIG    L  LDL  N+L  IP  
Sbjct: 237 LYLYSNELTTLPEEIGQLQNLRQLSLKLNNLTTLPKEIGQLQNLDNLDLSDNQLTLIPKE 296

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
           +G L NL  L LS N L ++P+ + +  +L   ++ G +L++LP
Sbjct: 297 IGQLQNLKLLDLSGNSLTTLPKEIGQLQNLKLLDLSGNSLTTLP 340



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/218 (39%), Positives = 121/218 (55%), Gaps = 5/218 (2%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           +T LP  + +L +LEEL LYGN L SLP +IG +     L L +N LT+LP  L  LQ L
Sbjct: 152 LTILPKEIGQLQNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTLPQGLCKLQNL 211

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
             + L  N+L  LP  + +L  L  LYL  N + T+  +I  L NL  LS++ N +  LP
Sbjct: 212 EQIYLHQNRLTSLPKEIGQLRKLWTLYLYSNELTTLPEEIGQLQNLRQLSLKLNNLTTLP 271

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            E+G+L+NL  LDL+ N L  +PKEIG    L  LDL  N L  +P  +G L NL  L L
Sbjct: 272 KEIGQLQNLDNLDLSDNQLTLIPKEIGQLQNLKLLDLSGNSLTTLPKEIGQLQNLKLLDL 331

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           S N L ++P+ + +       N+   A+  +PD +L  
Sbjct: 332 SGNSLTTLPKEIGQLK-----NLYFLAMKGIPDLILQK 364



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 173/349 (49%), Gaps = 34/349 (9%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS   +T  P  +EK  +L+ L L  N+L +LP +IG + NL  L ++ N+L  LP  
Sbjct: 53  LDLSSKLLTTFPKGIEKFQNLKHLDLSNNQLKALPKEIGQLQNLQKLNVSVNNLIELPQE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L  L+L  N+L  LP  + +L  L+ L++ +NR+                    
Sbjct: 113 IGQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRLTI------------------ 154

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
                LP E+G+L+NL  L L  N L  LP+EIG       L L  N+L  +P  L  L 
Sbjct: 155 -----LPKEIGQLQNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTLPQGLCKLQ 209

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL ++ L  NRL S+P+ + +   L    +    L++LP+  +  L ++  ++L  N  T
Sbjct: 210 NLEQIYLHQNRLTSLPKEIGQLRKLWTLYLYSNELTTLPEE-IGQLQNLRQLSLKLNNLT 268

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++ +++   NQ+  IP  I  + +NL  +++  N LT+LP ++G    L
Sbjct: 269 TLPK-EIGQLQNLDNLDLSDNQLTLIPKEI-GQLQNLKLLDLSGNSLTTLPKEIGQLQNL 326

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI---GNLRKL 451
             L+L  N ++ L ++I  L NL  L      +K +P  I    N+RKL
Sbjct: 327 KLLDLSGNSLTTLPKEIGQLKNLYFLA-----MKGIPDLILQKENIRKL 370



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 136/249 (54%), Gaps = 1/249 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L++S +++  LP  + +L +LE+L L GN+L +LP +IG +  L  L +  N LT
Sbjct: 94  QNLQKLNVSVNNLIELPQEIGQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRLT 153

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L  L L  N L  LP  + +L   + LYL  N++ T+   +  L NL  
Sbjct: 154 ILPKEIGQLQNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTLPQGLCKLQNLEQ 213

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           + +  N++  LP E+G+L+ L TL L  N L  LP+EIG    L  L L+ N L  +P  
Sbjct: 214 IYLHQNRLTSLPKEIGQLRKLWTLYLYSNELTTLPEEIGQLQNLRQLSLKLNNLTTLPKE 273

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LS N+L  +P+ + +  +L   ++ G +L++LP   +  L ++  + LS
Sbjct: 274 IGQLQNLDNLDLSDNQLTLIPKEIGQLQNLKLLDLSGNSLTTLPKE-IGQLQNLKLLDLS 332

Query: 341 RNKFTAYPS 349
            N  T  P 
Sbjct: 333 GNSLTTLPK 341



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 89/149 (59%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           CK +N+  + L ++ +T LP  + +L  L  LYLY N+L +LP +IG + NL  L L  N
Sbjct: 206 CKLQNLEQIYLHQNRLTSLPKEIGQLRKLWTLYLYSNELTTLPEEIGQLQNLRQLSLKLN 265

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           +LT+LP  +  LQ L  LDL  N+L  +P  + +L +LK+L L  N + T+  +I  L N
Sbjct: 266 NLTTLPKEIGQLQNLDNLDLSDNQLTLIPKEIGQLQNLKLLDLSGNSLTTLPKEIGQLQN 325

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDL 246
           L +L +  N +  LP E+G+LKNL  L +
Sbjct: 326 LKLLDLSGNSLTTLPKEIGQLKNLYFLAM 354



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 88/144 (61%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L+E ++N +++ VL LS+ LL   P  I   + LK LDL  N+L++LP EIG L+ LQ+L
Sbjct: 40  LTEALKNPMDVGVLDLSSKLLTTFPKGIEKFQNLKHLDLSNNQLKALPKEIGQLQNLQKL 99

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            +  N L+ LP+ IG L NL  L++  N L ++P+EIG L+ L TL++  N  L  +P E
Sbjct: 100 NVSVNNLIELPQEIGQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNR-LTILPKE 158

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    NL+ + L    L+ +P EI
Sbjct: 159 IGQLQNLEELILYGNSLTSLPEEI 182


>gi|384956088|sp|F1MCA7.3|LRRC7_BOVIN RecName: Full=Leucine-rich repeat-containing protein 7; AltName:
           Full=Densin-180; Short=Densin
          Length = 1536

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 200/389 (51%), Gaps = 7/389 (1%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 24  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALKKLSIPDNDLSN 83

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    +   L    +    L +LP  +   L  +  + L  N+F+  P  
Sbjct: 144 YLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFSELPEV 202

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              Q  ++  +  ++N +  +P G++ + K L  ++M  N + ++ +D+     L +L L
Sbjct: 203 L-DQIQNLRELWMDNNALQVLP-GVW-KLKMLVYLDMSKNRIETVDMDISGCEALEDLLL 259

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
            +N + +L + I  L  L  L + +N L  LP++IGNL  L+  D   N+LESLP+ IG+
Sbjct: 260 SSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGY 319

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+ L +  N L  LPR IG   N++ +S+  N L+ +PEEIG ++ L  L L+DN  
Sbjct: 320 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNR- 378

Query: 531 LNNIPFELALCSNLQIMSL-DNCPLSQIP 558
           L N+PF       L  + L DN   + IP
Sbjct: 379 LKNLPFSFTKLKELAALWLSDNQSKALIP 407



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 197/427 (46%), Gaps = 50/427 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q+     L  L +
Sbjct: 17  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALKKLSI 76

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L++LP ++A+L  L+ LD+  N + E P  +     L I+    N I  +      
Sbjct: 77  PDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 136

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ LPK +     L  LDL +NE 
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 196

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPET--LSKCVHLN---------EFNVEGCALSSL 323
             +P++L  + NL  L +  N L+ +P    L   V+L+         + ++ GC   +L
Sbjct: 197 SELPEVLDQIQNLRELWMDNNALQVLPGVWKLKMLVYLDMSKNRIETVDMDISGC--EAL 254

Query: 324 PDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
            D LLSS                                   N + ++P  I    K L+
Sbjct: 255 EDLLLSS-----------------------------------NMLQQLPDSI-GLLKKLT 278

Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
            + + DN LT LP  +G    L E +   N++  L   I  L +L  L +  N L +LP 
Sbjct: 279 TLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 338

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
            IG+ + +  + L  NKLE LP EIG +++L+ L L  N+L +LP +   L  L+ L + 
Sbjct: 339 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 398

Query: 504 ENNLQSI 510
           +N  +++
Sbjct: 399 DNQSKAL 405


>gi|341886752|gb|EGT42687.1| CBN-LET-413 protein [Caenorhabditis brenneri]
          Length = 711

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 206/415 (49%), Gaps = 50/415 (12%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLY----------------------- 132
           + C+ + + ++D S S++  +P  + +   LE+L L                        
Sbjct: 9   MGCQRQ-VDSVDRSSSNLQAIPTDIFRFRKLEDLNLTMNNIKELDRRLFTLRRLRVLDVS 67

Query: 133 GNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKL 192
            N+L+ LP  IG++T L  L L  N++T +P++L N + L  L L  N    LP  + + 
Sbjct: 68  DNELSVLPPDIGHLTQLIELNLNRNTITDIPETLKNCKLLTNLHLNGNPFTRLPESICEC 127

Query: 193 TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLE 252
           TS+ IL L    +  +  +I  L NL +L  R+N +R +P  + ELKNL  LDL  N +E
Sbjct: 128 TSITILSLNDTTLTILPANIGLLVNLRVLDARENHLRTIPNSIAELKNLEELDLGQNEIE 187

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           ELP++I                       G L +L    +  N L+S+P+++S C +L++
Sbjct: 188 ELPQKI-----------------------GKLTSLREFYVDTNFLQSLPDSISDCRNLDQ 224

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            +V    LS LPD  L ++TS+ ++ +S N+    PS        +  +  E N + ++ 
Sbjct: 225 LDVSDNRLSRLPDN-LGNMTSLTDLNISSNEIIELPS-SIGNLKRLQMLKAERNSLTQLA 282

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + ++L+++ +  N L+ LP  +G    LT LN+  N +S++ E I N  +L VL 
Sbjct: 283 PEI-GQCQSLTEMYLGQNYLSDLPDTIGDLRQLTTLNVDCNNLSEIPETIGNCKSLTVLS 341

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           L  N+L +LP +IG    +  LD+  NKL +LP  +  L +LQ L L  NQ  S+
Sbjct: 342 LRQNILTELPMTIGRCENMTVLDVASNKLPNLPFTVKVLYKLQALWLSENQSQSI 396



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 197/380 (51%), Gaps = 4/380 (1%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR 229
           +Q+  +D   + L  +P  +++   L+ L L  N IK +   +  L  L +L + DN++ 
Sbjct: 13  RQVDSVDRSSSNLQAIPTDIFRFRKLEDLNLTMNNIKELDRRLFTLRRLRVLDVSDNELS 72

Query: 230 ELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTR 289
            LPP++G L  L+ L+L  N + ++P+ + NC +L  L L  N    +P+ +    ++T 
Sbjct: 73  VLPPDIGHLTQLIELNLNRNTITDIPETLKNCKLLTNLHLNGNPFTRLPESICECTSITI 132

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS 349
           L L+   L  +P  +   V+L   +     L ++P+ + + L ++  + L +N+    P 
Sbjct: 133 LSLNDTTLTILPANIGLLVNLRVLDARENHLRTIPNSI-AELKNLEELDLGQNEIEELPQ 191

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
               + TS+     + N +  +P  I S  +NL ++++ DN L+ LP +LG    LT+LN
Sbjct: 192 K-IGKLTSLREFYVDTNFLQSLPDSI-SDCRNLDQLDVSDNRLSRLPDNLGNMTSLTDLN 249

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           + +N+I +L   I NL  L++L    N L +L   IG  + L  + L +N L  LP+ IG
Sbjct: 250 ISSNEIIELPSSIGNLKRLQMLKAERNSLTQLAPEIGQCQSLTEMYLGQNYLSDLPDTIG 309

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            L++L  L +  N L  +P  IG+  +L+ LS+ +N L  +P  IG  EN+  L +  N 
Sbjct: 310 DLRQLTTLNVDCNNLSEIPETIGNCKSLTVLSLRQNILTELPMTIGRCENMTVLDVASNK 369

Query: 530 CLNNIPFELALCSNLQIMSL 549
            L N+PF + +   LQ + L
Sbjct: 370 -LPNLPFTVKVLYKLQALWL 388



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 175/334 (52%), Gaps = 4/334 (1%)

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           ++ +P ++   + L  L+L  N+++EL + +     L  LD+  NEL  +P  +G+L  L
Sbjct: 25  LQAIPTDIFRFRKLEDLNLTMNNIKELDRRLFTLRRLRVLDVSDNELSVLPPDIGHLTQL 84

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L L+ N +  +PETL  C  L   ++ G   + LP+ +    TSI  ++L+    T  
Sbjct: 85  IELNLNRNTITDIPETLKNCKLLTNLHLNGNPFTRLPESICE-CTSITILSLNDTTLTIL 143

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
           P+       ++  ++   N +  IP  I +  KNL ++++  N +  LP  +G    L E
Sbjct: 144 PAN-IGLLVNLRVLDARENHLRTIPNSI-AELKNLEELDLGQNEIEELPQKIGKLTSLRE 201

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
             + TN +  L + I +  NL+ L +S+N L +LP ++GN+  L  L++  N++  LP+ 
Sbjct: 202 FYVDTNFLQSLPDSISDCRNLDQLDVSDNRLSRLPDNLGNMTSLTDLNISSNEIIELPSS 261

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
           IG LK LQ L  + N L  L   IG   +L+ + +G+N L  +P+ IG L  L TL ++ 
Sbjct: 262 IGNLKRLQMLKAERNSLTQLAPEIGQCQSLTEMYLGQNYLSDLPDTIGDLRQLTTLNVDC 321

Query: 528 NTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N  L+ IP  +  C +L ++SL    L+++P  I
Sbjct: 322 NN-LSEIPETIGNCKSLTVLSLRQNILTELPMTI 354



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 36/218 (16%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           + +L++S + I  LP S+  L  L+ L    N L  L  +IG   +LT + L +N L+ L
Sbjct: 245 LTDLNISSNEIIELPSSIGNLKRLQMLKAERNSLTQLAPEIGQCQSLTEMYLGQNYLSDL 304

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           PD++ +L+QL  L++  N L+E+P  +    SL +                       LS
Sbjct: 305 PDTIGDLRQLTTLNVDCNNLSEIPETIGNCKSLTV-----------------------LS 341

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +R N + ELP  +G  +N+  LD+A N L  LP  +     L  L L  N+  +I     
Sbjct: 342 LRQNILTELPMTIGRCENMTVLDVASNKLPNLPFTVKVLYKLQALWLSENQSQSI----- 396

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFN-VEGCA 319
                  L+L+  R E     +  C  L +F+ +EG A
Sbjct: 397 -------LKLTEARDERTGIKVVTCYLLPQFDAIEGEA 427



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 1/166 (0%)

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
           L +G    +  ++  ++ +  +  DI     LE L L+ N +K+L   +  LR+L+ LD+
Sbjct: 7   LPMGCQRQVDSVDRSSSNLQAIPTDIFRFRKLEDLNLTMNNIKELDRRLFTLRRLRVLDV 66

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
            +N+L  LP +IG L +L  L L  N +  +P  + +   L+ L +  N    +PE I  
Sbjct: 67  SDNELSVLPPDIGHLTQLIELNLNRNTITDIPETLKNCKLLTNLHLNGNPFTRLPESICE 126

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             ++  L LND T L  +P  + L  NL+++      L  IP+ I 
Sbjct: 127 CTSITILSLND-TTLTILPANIGLLVNLRVLDARENHLRTIPNSIA 171


>gi|379729933|ref|YP_005322129.1| hypothetical protein SGRA_1810 [Saprospira grandis str. Lewin]
 gi|378575544|gb|AFC24545.1| leucine-rich repeat-containing protein [Saprospira grandis str.
           Lewin]
          Length = 606

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 224/444 (50%), Gaps = 22/444 (4%)

Query: 89  LNIEKEFLRCKEENILNL------DLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQ 142
           LN+E  +L+   + + +L       LS + + +LP  ++ L +L  LY+ GN+L  LP+ 
Sbjct: 106 LNLENNYLKELPDGLFDLPYLEELRLSNNQLQYLPEKIKGLRNLRRLYIDGNELRMLPNN 165

Query: 143 IGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           +  +  L  +    N L S+P++L  L++LR L L  N+L  LP  +   ++L++L +  
Sbjct: 166 LAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLLLDKNQLQYLPETLSGASALEVLAIDD 225

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           NR+K +   + YL  L+ L    N+++ELPP++G  +NLV L + HN L+ LP+ IG   
Sbjct: 226 NRLKKLPEALIYLKKLTFLFAAHNELQELPPQIGSSRNLVKLCVEHNQLQRLPESIGQLQ 285

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  L L+HN+L  +P   G L  L +L L  N+L  +P    +   L    +    L+S
Sbjct: 286 KLELLRLEHNQLKQLPKNFGQLKALRKLYLDSNQLTVLPINFGELRALENLYLSDNQLTS 345

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
           LP G + +   +  + L+ N  T+ P   G   Q   +Y      NQI  +P   F   K
Sbjct: 346 LPSG-IGNCKELRELFLNNNAMTSLPDSMGTLYQLEELY---MNDNQIANLPSS-FGGLK 400

Query: 381 NLSKVNMKDNLLTSLP--LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
           NL  + + +N +  L   LD   W  L+ + L  N   KL + ++    L+ L L  NL+
Sbjct: 401 NLKLLFLTNNKINRLSEDLDCSGWKRLSAIYLENNAFQKLPKALETAPQLQTLYLDGNLI 460

Query: 439 KKLPSS-IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
            ++  S I  + K++ + L +N+L  LP+ +G    ++ L L+ N ++ LP +I +  NL
Sbjct: 461 SEVNDSIIIKMPKIEHISLNDNQLSELPDNMGSWP-IRHLALERNGIMDLPESIRYFKNL 519

Query: 498 SYLSVGEN-----NLQSIPEEIGT 516
             L +  N      L+ I E I +
Sbjct: 520 ELLDLAGNKITQKRLKKIQENIAS 543



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 229/477 (48%), Gaps = 17/477 (3%)

Query: 100 EENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL 159
           ++ +  LDLS  S+  L  S+ +  HL  L L  N L  LP  +  +  L  L L+ N L
Sbjct: 77  KDRVHRLDLSNDSLVSLGDSIREFRHLFFLNLENNYLKELPDGLFDLPYLEELRLSNNQL 136

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
             LP+ +  L+ LR L +  N+L  LP  + ++  L  +    N+++++   +  L  L 
Sbjct: 137 QYLPEKIKGLRNLRRLYIDGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRLR 196

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L +  N+++ LP  L     L  L +  N L++LP+ +     L  L   HNEL  +P 
Sbjct: 197 SLLLDKNQLQYLPETLSGASALEVLAIDDNRLKKLPEALIYLKKLTFLFAAHNELQELPP 256

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +G+  NL +L + +N+L+ +PE++ +   L    +E   L  LP      L ++  + L
Sbjct: 257 QIGSSRNLVKLCVEHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKN-FGQLKALRKLYL 315

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
             N+ T  P     +  ++ ++    NQ+  +P GI    K L ++ + +N +TSLP  +
Sbjct: 316 DSNQLTVLPINF-GELRALENLYLSDNQLTSLPSGI-GNCKELRELFLNNNAMTSLPDSM 373

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI--GNLRKLKCLDLE 457
           GT   L EL +  NQI+ L      L NL++L L+NN + +L   +     ++L  + LE
Sbjct: 374 GTLYQLEELYMNDNQIANLPSSFGGLKNLKLLFLTNNKINRLSEDLDCSGWKRLSAIYLE 433

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRA-IGHLTNLSYLSVGENNLQSIPEEIGT 516
            N  + LP  +    +LQ L L  N +  +  + I  +  + ++S+ +N L  +P+ +G+
Sbjct: 434 NNAFQKLPKALETAPQLQTLYLDGNLISEVNDSIIIKMPKIEHISLNDNQLSELPDNMGS 493

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ---------IPSEIVVG 564
               H L L  N  + ++P  +    NL+++ L    ++Q         I SE V+ 
Sbjct: 494 WPIRH-LALERNGIM-DLPESIRYFKNLELLDLAGNKITQKRLKKIQENIASEFVMA 548



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 186/354 (52%), Gaps = 18/354 (5%)

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           LSN S++S+ D+        + E ++L  L+L +N+L+ELP  + +   L  L L +N+L
Sbjct: 85  LSNDSLVSLGDS--------IREFRHLFFLNLENNYLKELPDGLFDLPYLEELRLSNNQL 136

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+ +  L NL RL +  N L  +P  L++   L     E   L S+P+ L   L  +
Sbjct: 137 QYLPEKIKGLRNLRRLYIDGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETL-GKLKRL 195

Query: 335 NNITLSRNKFTAYP---SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
            ++ L +N+    P   SG     +++  +  + N++ K+P  +    K L+ +    N 
Sbjct: 196 RSLLLDKNQLQYLPETLSGA----SALEVLAIDDNRLKKLPEALIY-LKKLTFLFAAHNE 250

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           L  LP  +G+   L +L +  NQ+ +L E I  L  LE+L L +N LK+LP + G L+ L
Sbjct: 251 LQELPPQIGSSRNLVKLCVEHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKNFGQLKAL 310

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           + L L+ N+L  LP   G L+ L+ L L  NQL SLP  IG+   L  L +  N + S+P
Sbjct: 311 RKLYLDSNQLTVLPINFGELRALENLYLSDNQLTSLPSGIGNCKELRELFLNNNAMTSLP 370

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGG 565
           + +GTL  L  LY+NDN  + N+P       NL+++ L N  ++++  ++   G
Sbjct: 371 DSMGTLYQLEELYMNDNQ-IANLPSSFGGLKNLKLLFLTNNKINRLSEDLDCSG 423


>gi|51476914|emb|CAH18423.1| hypothetical protein [Homo sapiens]
          Length = 1530

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 191/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 17  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSN 76

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 77  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 136

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    + V L    +    L +LP  +   L  +  + L  N+F   P  
Sbjct: 137 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFGELPE- 194

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 195 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 230

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 231 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 290

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 291 LSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 349

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++ +L +  L  +P
Sbjct: 350 LEFLPEEIGQMQKLRVPNLSDNRLKNLP 377



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 201/443 (45%), Gaps = 50/443 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q            
Sbjct: 10  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQ------------ 57

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q LR L +  N L+ LP  +  L +LK L +  N ++    +I+ 
Sbjct: 58  -----------LFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKC 106

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G    L  L+L+ N L
Sbjct: 107 CKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHL 166

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    +PE L +  +L E  ++  AL  LP G +  L  +
Sbjct: 167 KTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLP-GSIGKLKML 225

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N+              + +++ +            S  + L  + +  N+L  
Sbjct: 226 VYLDMSKNR--------------IETVDMD-----------ISGCEALEDLLLSSNMLQQ 260

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    LT L +  NQ++ L   I NL  LE    S N L+ LPS+IG L  L+ L
Sbjct: 261 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 320

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            ++EN L  LP EIG  K +  + L+SN+L  LP  IG +  L   ++ +N L+++P   
Sbjct: 321 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVPNLSDNRLKNLPFSF 380

Query: 515 GTLENLHTLYLNDNTCLNNIPFE 537
             L+ L  L+L+DN     IP +
Sbjct: 381 TKLKELAALWLSDNQSKALIPLQ 403



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 179/390 (45%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 86  NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 145

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 146 LPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLREL 205

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 206 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 265

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 266 GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS---------------- 309

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                             +I + H               +L  + + +N L  LP ++G+
Sbjct: 310 ------------------TIGYLH---------------SLRTLAVDENFLPELPREIGS 336

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L V  LS+N LK LP S   L++L  L L +N+ 
Sbjct: 337 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVPNLSDNRLKNLPFSFTKLKELAALWLSDNQS 396

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 397 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 426



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 182/402 (45%), Gaps = 61/402 (15%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + K+   C+   +  L +  + +++LP ++  L +L+EL +  N +   P  I     LT
Sbjct: 54  LPKQLFNCQA--LRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 111

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            +  + N ++ LPD    L  L  L L    L  LP    +L  L+IL LR N +KT+  
Sbjct: 112 IIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPK 171

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
            +  L+ L  L + +N+  ELP  L +++NL  L + +N L+ LP  IG   MLV LD  
Sbjct: 172 SMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD-- 229

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLL 328
                                +S NR+E+V   +S C  L +  +    L  LPD  GLL
Sbjct: 230 ---------------------MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLL 268

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
             LT                           ++  + NQ+  +P  I     NLS +   
Sbjct: 269 KKLT---------------------------TLKVDDNQLTMLPNTI----GNLSLLEEF 297

Query: 389 D---NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           D   N L SLP  +G    L  L +  N + +L  +I +  N+ V+ L +N L+ LP  I
Sbjct: 298 DCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 357

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           G ++KL+  +L +N+L++LP     LKEL  L L  NQ  +L
Sbjct: 358 GQMQKLRVPNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 399


>gi|428306331|ref|YP_007143156.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
 gi|428247866|gb|AFZ13646.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
          Length = 1011

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 190/342 (55%), Gaps = 8/342 (2%)

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
           R LDL   +L ELP  + KL  L+ L L   +I+      +++ +  +  +  N ++ LP
Sbjct: 19  RELDLSGQELTELPGEIGKLQQLESLILG-KKIEAY----EFVGDRYLEKVSGNNLKTLP 73

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            EL  L NL  LD++ N LE +P  +     L  L L   +L  IPD +  L NLT+L L
Sbjct: 74  LELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVKLTEIPDAIAKLTNLTQLDL 133

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
           S N++  +PE ++K  +L +  +    ++ +P+  ++ LT++    LS N+ T  P    
Sbjct: 134 SNNQITQIPEAIAKLTNLTQLVLFNNQITQIPEA-IAKLTNLTQFILSNNQITQIPE-AI 191

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
              T++  +   +NQI +IP  I +   NL+++++ +N +T +P  +   + LT+L+L  
Sbjct: 192 ANLTNLTQLILSNNQITQIPEAI-ANLTNLTQLDLLNNKITQIPEAIANLINLTQLDLLN 250

Query: 413 NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           N+I+++ E I  L NL  L+LS+N + ++P +I  L  L  LDL  NK+  +P  I  L 
Sbjct: 251 NKITQIPEAIAKLTNLTQLILSDNKITQIPEAIAKLTNLTQLDLHSNKITQIPEAIAKLT 310

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            L +L L+SN++  +P AI  LTNL+ L + +N++ +IP E+
Sbjct: 311 NLTQLDLRSNKITQIPEAIAKLTNLTQLDLSDNSITNIPLEM 352



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 164/298 (55%), Gaps = 26/298 (8%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+S + +  +P  V ++ HLEEL L   KL  +P  I  +TNLT L L+ N +T 
Sbjct: 81  NLRKLDISGNPLESIPDVVTQILHLEELILIRVKLTEIPDAIAKLTNLTQLDLSNNQITQ 140

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P+++A L  L  L L +N++ ++P  + KLT+L    L  N+I  +   I  L+NL+ L
Sbjct: 141 IPEAIAKLTNLTQLVLFNNQITQIPEAIAKLTNLTQFILSNNQITQIPEAIANLTNLTQL 200

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + +N+I ++P  +  L NL  LDL +N + ++P+ I N   L  LDL +N++  IP+ +
Sbjct: 201 ILSNNQITQIPEAIANLTNLTQLDLLNNKITQIPEAIANLINLTQLDLLNNKITQIPEAI 260

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NLT+L LS N++  +PE ++K  +L + ++    ++ +P+  ++ LT++  + L  
Sbjct: 261 AKLTNLTQLILSDNKITQIPEAIAKLTNLTQLDLHSNKITQIPEA-IAKLTNLTQLDLRS 319

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           NK T  P                            ++  NL+++++ DN +T++PL++
Sbjct: 320 NKITQIPEA-------------------------IAKLTNLTQLDLSDNSITNIPLEM 352



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 181/340 (53%), Gaps = 21/340 (6%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYL------------------YGNKLAS 138
           R   E    LDLS   +T LP  + KL  LE L L                   GN L +
Sbjct: 12  RAVAEGWRELDLSGQELTELPGEIGKLQQLESLILGKKIEAYEFVGDRYLEKVSGNNLKT 71

Query: 139 LPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL 198
           LP ++  + NL  L ++ N L S+PD +  +  L  L L   KL E+P  + KLT+L  L
Sbjct: 72  LPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVKLTEIPDAIAKLTNLTQL 131

Query: 199 YLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
            L  N+I  +   I  L+NL+ L + +N+I ++P  + +L NL    L++N + ++P+ I
Sbjct: 132 DLSNNQITQIPEAIAKLTNLTQLVLFNNQITQIPEAIAKLTNLTQFILSNNQITQIPEAI 191

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
            N T L  L L +N++  IP+ + NL NLT+L L  N++  +PE ++  ++L + ++   
Sbjct: 192 ANLTNLTQLILSNNQITQIPEAIANLTNLTQLDLLNNKITQIPEAIANLINLTQLDLLNN 251

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
            ++ +P+  ++ LT++  + LS NK T  P     + T++  ++   N+I +IP  I ++
Sbjct: 252 KITQIPEA-IAKLTNLTQLILSDNKITQIPE-AIAKLTNLTQLDLHSNKITQIPEAI-AK 308

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
             NL++++++ N +T +P  +     LT+L+L  N I+ +
Sbjct: 309 LTNLTQLDLRSNKITQIPEAIAKLTNLTQLDLSDNSITNI 348



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 80/233 (34%), Positives = 140/233 (60%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            K  N+  LDLS + IT +P ++ KLT+L +L L+ N++  +P  I  +TNLT   L+ N
Sbjct: 123 AKLTNLTQLDLSNNQITQIPEAIAKLTNLTQLVLFNNQITQIPEAIAKLTNLTQFILSNN 182

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            +T +P+++ANL  L  L L +N++ ++P  +  LT+L  L L  N+I  +   I  L N
Sbjct: 183 QITQIPEAIANLTNLTQLILSNNQITQIPEAIANLTNLTQLDLLNNKITQIPEAIANLIN 242

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L+ L + +NKI ++P  + +L NL  L L+ N + ++P+ I   T L  LDL  N++  I
Sbjct: 243 LTQLDLLNNKITQIPEAIAKLTNLTQLILSDNKITQIPEAIAKLTNLTQLDLHSNKITQI 302

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           P+ +  L NLT+L L  N++  +PE ++K  +L + ++   +++++P  +L+S
Sbjct: 303 PEAIAKLTNLTQLDLRSNKITQIPEAIAKLTNLTQLDLSDNSITNIPLEMLNS 355



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 168/337 (49%), Gaps = 45/337 (13%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDL------------------QHNELVNIPDMLGNLI 285
           LDL+   L ELP EIG    L +L L                    N L  +P  L  L 
Sbjct: 21  LDLSGQELTELPGEIGKLQQLESLILGKKIEAYEFVGDRYLEKVSGNNLKTLPLELLGLP 80

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL +L +S N LES+P+ +++ +HL E  +    L+ +PD +                  
Sbjct: 81  NLRKLDISGNPLESIPDVVTQILHLEELILIRVKLTEIPDAI------------------ 122

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                   + T++  ++  +NQI +IP  I ++  NL+++ + +N +T +P  +     L
Sbjct: 123 -------AKLTNLTQLDLSNNQITQIPEAI-AKLTNLTQLVLFNNQITQIPEAIAKLTNL 174

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
           T+  L  NQI+++ E I NL NL  L+LSNN + ++P +I NL  L  LDL  NK+  +P
Sbjct: 175 TQFILSNNQITQIPEAIANLTNLTQLILSNNQITQIPEAIANLTNLTQLDLLNNKITQIP 234

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
             I  L  L +L L +N++  +P AI  LTNL+ L + +N +  IPE I  L NL  L L
Sbjct: 235 EAIANLINLTQLDLLNNKITQIPEAIAKLTNLTQLILSDNKITQIPEAIAKLTNLTQLDL 294

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           + N  +  IP  +A  +NL  + L +  ++QIP  I 
Sbjct: 295 HSNK-ITQIPEAIAKLTNLTQLDLRSNKITQIPEAIA 330


>gi|449678883|ref|XP_002165472.2| PREDICTED: protein scribble homolog, partial [Hydra magnipapillata]
          Length = 432

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 123/378 (32%), Positives = 181/378 (47%), Gaps = 27/378 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L  + +T LP  + ++T L  L L  N++  L + I  +  L  L  ++N +  +PDS
Sbjct: 47  LSLEGNQLTDLPKGIFRMTKLRRLILADNEIQDLTNDISSLIALEELDFSKNDVRVVPDS 106

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + N ++L  LD+  N L ELP  + KL  LK        +  + P+I  LSNL +L +R+
Sbjct: 107 IQNCKKLTFLDISSNTLGELPDSLTKLNQLKTWIANDIALTEIPPEIGSLSNLVVLELRE 166

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N I+ LP     L  L  LDL  N LEELP  IG  T L+ L L +N L  +P  +G L 
Sbjct: 167 NCIKFLPLSFSFLSKLERLDLGGNELEELPDTIGQLTCLIELWLDNNFLTTLPSEIGELK 226

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L +S NR+E +PE +S    L + +    AL  LP G+                  
Sbjct: 227 ALQCLDVSENRIEELPEEISTLTSLTDLHCTSNALHELPQGI------------------ 268

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                       +  +  + N+ID+I   I     NL +V + +N++  LP  +G    L
Sbjct: 269 -------GCLIKLQILKVDQNEIDEITDCI-GGCTNLLEVVLSENVIEFLPAAIGKLSNL 320

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
           T LN+  N++     +I N   L VL   +N + K+P  IG+ + L  L L  NKLESLP
Sbjct: 321 TLLNIDRNRLFTFPPEIGNCTKLSVLSARDNQIVKIPKEIGSCKSLTVLSLSGNKLESLP 380

Query: 466 NEIGFLKELQRLILQSNQ 483
             +  L  L+ L L  NQ
Sbjct: 381 FAVSTLP-LKALWLSQNQ 397



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 121/382 (31%), Positives = 196/382 (51%), Gaps = 5/382 (1%)

Query: 148 NLTCLGLAENSLTSLP-DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK 206
           NL  L  +  SLT++  D L +   L  L L  N+L +LP  ++++T L+ L L  N I+
Sbjct: 19  NLDYLDKSHCSLTTVTEDILRHAGTLEELSLEGNQLTDLPKGIFRMTKLRRLILADNEIQ 78

Query: 207 TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
            +  DI  L  L  L    N +R +P  +   K L  LD++ N L ELP  +     L T
Sbjct: 79  DLTNDISSLIALEELDFSKNDVRVVPDSIQNCKKLTFLDISSNTLGELPDSLTKLNQLKT 138

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
                  L  IP  +G+L NL  L L  N ++ +P + S    L   ++ G  L  LPD 
Sbjct: 139 WIANDIALTEIPPEIGSLSNLVVLELRENCIKFLPLSFSFLSKLERLDLGGNELEELPDT 198

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
           +   LT +  + L  N  T  PS    +  ++  ++   N+I+++P  I S   +L+ ++
Sbjct: 199 I-GQLTCLIELWLDNNFLTTLPSE-IGELKALQCLDVSENRIEELPEEI-STLTSLTDLH 255

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
              N L  LP  +G  + L  L +  N+I ++++ I    NL  +VLS N+++ LP++IG
Sbjct: 256 CTSNALHELPQGIGCLIKLQILKVDQNEIDEITDCIGGCTNLLEVVLSENVIEFLPAAIG 315

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            L  L  L+++ N+L + P EIG   +L  L  + NQ+V +P+ IG   +L+ LS+  N 
Sbjct: 316 KLSNLTLLNIDRNRLFTFPPEIGNCTKLSVLSARDNQIVKIPKEIGSCKSLTVLSLSGNK 375

Query: 507 LQSIPEEIGTLENLHTLYLNDN 528
           L+S+P  + TL  L  L+L+ N
Sbjct: 376 LESLPFAVSTLP-LKALWLSQN 396



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 188/358 (52%), Gaps = 5/358 (1%)

Query: 205 IKTVHPDI-QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTM 263
           + TV  DI ++   L  LS+  N++ +LP  +  +  L  L LA N +++L  +I +   
Sbjct: 30  LTTVTEDILRHAGTLEELSLEGNQLTDLPKGIFRMTKLRRLILADNEIQDLTNDISSLIA 89

Query: 264 LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSL 323
           L  LD   N++  +PD + N   LT L +S N L  +P++L+K   L  +     AL+ +
Sbjct: 90  LEELDFSKNDVRVVPDSIQNCKKLTFLDISSNTLGELPDSLTKLNQLKTWIANDIALTEI 149

Query: 324 PDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
           P  +  SL+++  + L  N     P    +  + +  ++   N+++++P  I  +   L 
Sbjct: 150 PPEI-GSLSNLVVLELRENCIKFLPLSF-SFLSKLERLDLGGNELEELPDTI-GQLTCLI 206

Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
           ++ + +N LT+LP ++G    L  L++  N+I +L E+I  L +L  L  ++N L +LP 
Sbjct: 207 ELWLDNNFLTTLPSEIGELKALQCLDVSENRIEELPEEISTLTSLTDLHCTSNALHELPQ 266

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
            IG L KL+ L +++N+++ + + IG    L  ++L  N +  LP AIG L+NL+ L++ 
Sbjct: 267 GIGCLIKLQILKVDQNEIDEITDCIGGCTNLLEVVLSENVIEFLPAAIGKLSNLTLLNID 326

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N L + P EIG    L  L   DN  +  IP E+  C +L ++SL    L  +P  +
Sbjct: 327 RNRLFTFPPEIGNCTKLSVLSARDNQIV-KIPKEIGSCKSLTVLSLSGNKLESLPFAV 383



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 174/364 (47%), Gaps = 39/364 (10%)

Query: 202 FNRIKTVHP-DIQYL--SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
           F   K  HP ++ YL  S+ S+ ++ ++ +R      G L+ L    L  N L +LPK I
Sbjct: 9   FAFRKRWHPRNLDYLDKSHCSLTTVTEDILRHA----GTLEEL---SLEGNQLTDLPKGI 61

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
              T L  L L  NE+ ++ + + +LI L  L  S N +  VP+++  C  L   ++   
Sbjct: 62  FRMTKLRRLILADNEIQDLTNDISSLIALEELDFSKNDVRVVPDSIQNCKKLTFLDISSN 121

Query: 319 ALSSLPDGLLSSLTSINNI-TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
            L  LPD    SLT +N + T   N                         + +IP  I S
Sbjct: 122 TLGELPD----SLTKLNQLKTWIANDIA----------------------LTEIPPEIGS 155

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
            + NL  + +++N +  LPL       L  L+LG N++ +L + I  L  L  L L NN 
Sbjct: 156 LS-NLVVLELRENCIKFLPLSFSFLSKLERLDLGGNELEELPDTIGQLTCLIELWLDNNF 214

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L  LPS IG L+ L+CLD+ EN++E LP EI  L  L  L   SN L  LP+ IG L  L
Sbjct: 215 LTTLPSEIGELKALQCLDVSENRIEELPEEISTLTSLTDLHCTSNALHELPQGIGCLIKL 274

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
             L V +N +  I + IG   NL  + L++N  +  +P  +   SNL ++++D   L   
Sbjct: 275 QILKVDQNEIDEITDCIGGCTNLLEVVLSENV-IEFLPAAIGKLSNLTLLNIDRNRLFTF 333

Query: 558 PSEI 561
           P EI
Sbjct: 334 PPEI 337


>gi|301104447|ref|XP_002901308.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262100783|gb|EEY58835.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 458

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 132/411 (32%), Positives = 205/411 (49%), Gaps = 13/411 (3%)

Query: 116 LPPSV-EKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRV 174
           LPP V E+ THL EL L   KL  LP+  G +  L  L LA N L +LP S   LQ+L  
Sbjct: 36  LPPEVLERATHLTELRLEHAKLKHLPASFGSLILLERLSLAGNKLETLPLSFHELQRLEE 95

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           LDL  N L+ L      L SL+ L +  N +K +  +   L +L +L M +N ++ LP  
Sbjct: 96  LDLSCNALSSLLGNFCNLGSLRRLCMYENALKKLPREFGALKSLEVLDMHNNALKRLPKS 155

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
              L +L  L+L+ N L +LP+  GN + L+  +L  N L  +PD  G L  L  L LSY
Sbjct: 156 FPCLTSLTRLELSRNKLRKLPQAFGNLSALLICNLGRNMLRELPDYFGMLGALEVLSLSY 215

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
           N L  +P + ++   L   ++ G  +   P   +SSLT++  +T + N+   +  G  + 
Sbjct: 216 NALYKLPASFAELTGLKNLSLTGNRIECFP-AQISSLTALVTLTYAENRLRLWRPGEKSI 274

Query: 355 FT-----SVYSINF----EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP-LDLGTWVG 404
                  SVY +      + N++   P         +  +++ DN L  LP    G    
Sbjct: 275 LDEEAPESVYKLGTSDEEDTNEVGITPSNPLVTLAAIQYLDLSDNALEYLPSRGWGRLET 334

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L  L L  N++  +  ++ +L  L+ L ++ N LK LPSS+ + + L  LD ++N L+ L
Sbjct: 335 LLHLKLSRNRLHLIPPEVGSLPRLQRLDIAANKLKTLPSSLFSNKSLAYLDAQQNTLQEL 394

Query: 465 PNEIGFLKELQRLILQSNQ-LVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           P+  G  + L RL+L  N+ L  LPR+I  L  L  L V ++   ++ EE+
Sbjct: 395 PDNAGECEALVRLVLTKNRDLRGLPRSICRLALLEELRVDKSCFLALGEEL 445



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 172/371 (46%), Gaps = 16/371 (4%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS ++++ L  +   L  L  L +Y N L  LP + G + +L  L +  N+L  LP S
Sbjct: 96  LDLSCNALSSLLGNFCNLGSLRRLCMYENALKKLPREFGALKSLEVLDMHNNALKRLPKS 155

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
              L  L  L+L  NKL +LP     L++L I  L  N ++ +      L  L +LS+  
Sbjct: 156 FPCLTSLTRLELSRNKLRKLPQAFGNLSALLICNLGRNMLRELPDYFGMLGALEVLSLSY 215

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N + +LP    EL  L  L L  N +E  P +I + T LVTL    N L        +++
Sbjct: 216 NALYKLPASFAELTGLKNLSLTGNRIECFPAQISSLTALVTLTYAENRLRLWRPGEKSIL 275

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +           E  PE++ K    +E +     ++  P   L +L +I  + LS N   
Sbjct: 276 D-----------EEAPESVYKLGTSDEEDTNEVGIT--PSNPLVTLAAIQYLDLSDNALE 322

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             PS G  +  ++  +    N++  IP  + S  + L ++++  N L +LP  L +   L
Sbjct: 323 YLPSRGWGRLETLLHLKLSRNRLHLIPPEVGSLPR-LQRLDIAANKLKTLPSSLFSNKSL 381

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNL-LKKLPSSIGNLRKLKCLDLEENKLESL 464
             L+   N + +L ++      L  LVL+ N  L+ LP SI  L  L+ L ++++   +L
Sbjct: 382 AYLDAQQNTLQELPDNAGECEALVRLVLTKNRDLRGLPRSICRLALLEELRVDKSCFLAL 441

Query: 465 PNEI-GFLKEL 474
             E+  F +EL
Sbjct: 442 GEELTAFCREL 452



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 106/228 (46%), Gaps = 3/228 (1%)

Query: 301 PETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYS 360
           PE L +  HL E  +E   L  LP     SL  +  ++L+ NK    P     +   +  
Sbjct: 38  PEVLERATHLTELRLEHAKLKHLPASF-GSLILLERLSLAGNKLETLPLSF-HELQRLEE 95

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
           ++   N +  +  G F    +L ++ M +N L  LP + G    L  L++  N + +L +
Sbjct: 96  LDLSCNALSSL-LGNFCNLGSLRRLCMYENALKKLPREFGALKSLEVLDMHNNALKRLPK 154

Query: 421 DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQ 480
               L +L  L LS N L+KLP + GNL  L   +L  N L  LP+  G L  L+ L L 
Sbjct: 155 SFPCLTSLTRLELSRNKLRKLPQAFGNLSALLICNLGRNMLRELPDYFGMLGALEVLSLS 214

Query: 481 SNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            N L  LP +   LT L  LS+  N ++  P +I +L  L TL   +N
Sbjct: 215 YNALYKLPASFAELTGLKNLSLTGNRIECFPAQISSLTALVTLTYAEN 262



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 104/206 (50%), Gaps = 2/206 (0%)

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
           T +  +  EH ++  +P   F     L ++++  N L +LPL       L EL+L  N +
Sbjct: 45  THLTELRLEHAKLKHLPAS-FGSLILLERLSLAGNKLETLPLSFHELQRLEELDLSCNAL 103

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           S L  +  NL +L  L +  N LKKLP   G L+ L+ LD+  N L+ LP     L  L 
Sbjct: 104 SSLLGNFCNLGSLRRLCMYENALKKLPREFGALKSLEVLDMHNNALKRLPKSFPCLTSLT 163

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
           RL L  N+L  LP+A G+L+ L   ++G N L+ +P+  G L  L  L L+ N  L  +P
Sbjct: 164 RLELSRNKLRKLPQAFGNLSALLICNLGRNMLRELPDYFGMLGALEVLSLSYNA-LYKLP 222

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEI 561
              A  + L+ +SL    +   P++I
Sbjct: 223 ASFAELTGLKNLSLTGNRIECFPAQI 248



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 96/192 (50%), Gaps = 1/192 (0%)

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           +P  +  RA +L+++ ++   L  LP   G+ + L  L+L  N++  L      L  LE 
Sbjct: 36  LPPEVLERATHLTELRLEHAKLKHLPASFGSLILLERLSLAGNKLETLPLSFHELQRLEE 95

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA 490
           L LS N L  L  +  NL  L+ L + EN L+ LP E G LK L+ L + +N L  LP++
Sbjct: 96  LDLSCNALSSLLGNFCNLGSLRRLCMYENALKKLPREFGALKSLEVLDMHNNALKRLPKS 155

Query: 491 IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLD 550
              LT+L+ L +  N L+ +P+  G L  L    L  N  L  +P    +   L+++SL 
Sbjct: 156 FPCLTSLTRLELSRNKLRKLPQAFGNLSALLICNLGRNM-LRELPDYFGMLGALEVLSLS 214

Query: 551 NCPLSQIPSEIV 562
              L ++P+   
Sbjct: 215 YNALYKLPASFA 226



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 113/267 (42%), Gaps = 35/267 (13%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   ++  L + ++++  LP     L  LE L ++ N L  LP     +T+LT L L+ N
Sbjct: 111 CNLGSLRRLCMYENALKKLPREFGALKSLEVLDMHNNALKRLPKSFPCLTSLTRLELSRN 170

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L  LP +  NL  L + +L  N L ELP     L +L++L L +N +  +      L+ 
Sbjct: 171 KLRKLPQAFGNLSALLICNLGRNMLRELPDYFGMLGALEVLSLSYNALYKLPASFAELTG 230

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHL------------EELPK--------- 256
           L  LS+  N+I   P ++  L  LVTL  A N L            EE P+         
Sbjct: 231 LKNLSLTGNRIECFPAQISSLTALVTLTYAENRLRLWRPGEKSILDEEAPESVYKLGTSD 290

Query: 257 -----EIG--------NCTMLVTLDLQHNELVNIPDM-LGNLINLTRLRLSYNRLESVPE 302
                E+G            +  LDL  N L  +P    G L  L  L+LS NRL  +P 
Sbjct: 291 EEDTNEVGITPSNPLVTLAAIQYLDLSDNALEYLPSRGWGRLETLLHLKLSRNRLHLIPP 350

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLS 329
            +     L   ++    L +LP  L S
Sbjct: 351 EVGSLPRLQRLDIAANKLKTLPSSLFS 377


>gi|350417073|ref|XP_003491243.1| PREDICTED: protein lap4-like isoform 1 [Bombus impatiens]
          Length = 2050

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 195/394 (49%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L  +P  + + + SL+ L L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEYIDKRHCSLPCVPDDILRYSRSLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P+ I N   L   D   N +  +P     L NLT
Sbjct: 73  HRLPPDIQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L SLP+ L S L  +  + L  N     P
Sbjct: 133 VLGLNDMSLTNLPPDFGSLEALQSLELRENLLKSLPESL-SQLYKLERLDLGDNDIEVLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
           +                  I K+P         L ++ +  N L  LP ++G    L  L
Sbjct: 192 A-----------------HIGKLPA--------LQELWLDHNQLQHLPPEIGELKTLACL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++  L E+I  L +L  L LS N+++KLP  +G L+KL  L +++N+L +L + I
Sbjct: 227 DVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKLTILKVDQNRLSTLNSNI 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + LQ LIL  N L+ LP  IG L NL+ L+V  N+LQS+P EIG L+ L  L L DN
Sbjct: 287 GRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P E+  C+ L ++ +    L  +P  ++
Sbjct: 347 K-LQYLPIEVGQCTALHVLDVSGNRLQYLPYSLI 379



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 172/336 (51%), Gaps = 27/336 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P +++ L  L+      N +  LP+    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L+ L+ L+LR N L  LP  + +L  L+ L L  N I+ +   I  L  L  
Sbjct: 143 NLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPE+GELK L  LD++ N LE+LP+EIG    L  L L  N +  +PD 
Sbjct: 203 LWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           LG L  LT L++  NRL ++   + +C +L E  +    L  LP   +  L ++NN+ + 
Sbjct: 263 LGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELP-VTIGKLHNLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN   + P+                              K L  ++++DN L  LP+++G
Sbjct: 322 RNSLQSLPTE-------------------------IGNLKQLGVLSLRDNKLQYLPIEVG 356

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
               L  L++  N++  L   + NL NL+ + LS N
Sbjct: 357 QCTALHVLDVSGNRLQYLPYSLINL-NLKAVWLSKN 391



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 169/358 (47%), Gaps = 26/358 (7%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  + I  LP +  +L  L +L L  N++  LP  I    NL  L ++ N +  +P+++ 
Sbjct: 44  LDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDIPENIK 103

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
           NL+ L+V D   N +  LP    +L +L +L L    +  + PD   L  L  L +R+N 
Sbjct: 104 NLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENL 163

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           ++ LP  L +L  L  LDL  N +E LP  IG    L  L L HN+L ++P  +G L  L
Sbjct: 164 LKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGELKTL 223

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L +S NRLE +PE +     L + ++    +  LPDG L  L  +  + + +N+ +  
Sbjct: 224 ACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDG-LGELQKLTILKVDQNRLSTL 282

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
            S                            R +NL ++ + +N L  LP+ +G    L  
Sbjct: 283 NSN-------------------------IGRCENLQELILTENFLLELPVTIGKLHNLNN 317

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
           LN+  N +  L  +I NL  L VL L +N L+ LP  +G    L  LD+  N+L+ LP
Sbjct: 318 LNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLP 375


>gi|455790935|gb|EMF42777.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 423

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 130/381 (34%), Positives = 199/381 (52%), Gaps = 26/381 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++ NLDLS   +  LP  + +L +L++L L GN+   L  +I  + +L  L L  N LT 
Sbjct: 42  DVRNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTV 101

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  LQ L+ L L  N+L  LP  + +  +L+ L L  N++  +  +I  L NL  L
Sbjct: 102 LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQEL 161

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           S+  NK+  LP E+ +LK+L  LDL HN    + KE+     L  LDL+ N+L  IP  +
Sbjct: 162 SLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEI 221

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L +L  L L+ N+L S+P+ + +  +L   N                        L  
Sbjct: 222 RQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLN------------------------LGE 257

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P         +    + +NQ+ + P  +  + K+L  +++  N +T+LP+++  
Sbjct: 258 NRFQIFPVEILELKNLLELNLY-YNQLVEFPKEV-GQLKSLKYLSLYHNQITTLPVEVTQ 315

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L EL+L  N+I+ L ++I  L NLE L LSNN L  LP  IG L+KL+ L+L  N+L
Sbjct: 316 LPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQL 375

Query: 462 ESLPNEIGFLKELQRLILQSN 482
            +LP EI  LK LQRL L SN
Sbjct: 376 TTLPKEIEQLKNLQRLELDSN 396



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 129/358 (36%), Positives = 192/358 (53%), Gaps = 4/358 (1%)

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L L F  +KT+   I  L NL  L +  N+   L  E+ +LK+L  L+L +N L  LPKE
Sbjct: 46  LDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKE 105

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           IG    L  L L  NELVN+P  +G   NL +L L  N+L  +P+ + +  +L E ++  
Sbjct: 106 IGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLS 165

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             L SLP  +   L S+ N+ L+ N+FT   S       ++ +++   N++  IP  I  
Sbjct: 166 NKLISLPTEI-EQLKSLKNLDLNHNEFTTV-SKEVMLLETLENLDLRSNKLKTIPKEI-R 222

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           + K+L  + +  N LTSLP ++     L  LNLG N+      +I  L NL  L L  N 
Sbjct: 223 QLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQ 282

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L + P  +G L+ LK L L  N++ +LP E+  L +LQ L L  N++  LP+ I  L NL
Sbjct: 283 LVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNL 342

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            +LS+  N L ++P+EIG L+ L  L L +N  L  +P E+    NLQ + LD+ P+S
Sbjct: 343 EWLSLSNNKLNALPKEIGQLKKLQRLELGNNQ-LTTLPKEIEQLKNLQRLELDSNPIS 399



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 190/370 (51%), Gaps = 26/370 (7%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L +LP++IG + NL  L L  N  T L   +  L+ L+ L+L +NKL  LP  + +L +L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           + L L  N +  +  +I    NL  L++ +NK+  LP E+G+L+NL  L L  N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
            EI     L  LDL HNE   +   +  L  L  L L  N+L+++P+ + +   L    +
Sbjct: 173 TEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
            G  L+SLP  +   L ++  + L  N+F  +P         +    + +NQ+ + P  +
Sbjct: 233 TGNQLTSLPKEI-EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY-YNQLVEFPKEV 290

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             + K+L  +++  N +T+LP+++     L EL+L  N+I+ L ++I  L NLE L LSN
Sbjct: 291 -GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSN 349

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N                       KL +LP EIG LK+LQRL L +NQL +LP+ I  L 
Sbjct: 350 N-----------------------KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK 386

Query: 496 NLSYLSVGEN 505
           NL  L +  N
Sbjct: 387 NLQRLELDSN 396



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 160/290 (55%), Gaps = 3/290 (1%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L  + + +LP  + +  +L++L L  NKL  LP +IG + NL  L L  N L 
Sbjct: 110 QNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLI 169

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP  +  L+ L+ LDL HN+   +   V  L +L+ L LR N++KT+  +I+ L +L +
Sbjct: 170 SLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKV 229

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+ +L+NL TL+L  N  +  P EI     L+ L+L +N+LV  P  
Sbjct: 230 LMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKE 289

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L +L  L L +N++ ++P  +++   L E ++ G  ++ LP  +L  L ++  ++LS
Sbjct: 290 VGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEIL-QLKNLEWLSLS 348

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
            NK  A P     Q   +  +   +NQ+  +P  I  + KNL ++ +  N
Sbjct: 349 NNKLNALPK-EIGQLKKLQRLELGNNQLTTLPKEI-EQLKNLQRLELDSN 396



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 186/360 (51%), Gaps = 8/360 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  +  T L   + +L  L++L L  NKL  LP +IG + NL  L L  N L 
Sbjct: 64  KNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELV 123

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +   + L+ L+L +NKL  LP  + +L +L+ L L  N++ ++  +I+ L +L  
Sbjct: 124 NLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKN 183

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+   +  E+  L+ L  LDL  N L+ +PKEI     L  L L  N+L ++P  
Sbjct: 184 LDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKE 243

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  NR +  P  + +  +L E N+    L   P   +  L S+  ++L 
Sbjct: 244 IEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKE-VGQLKSLKYLSLY 302

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P    TQ   +  ++   N+I  +P  I  + KNL  +++ +N L +LP ++G
Sbjct: 303 HNQITTLPV-EVTQLPDLQELHLSGNKITILPKEIL-QLKNLEWLSLSNNKLNALPKEIG 360

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL--KC-LDLE 457
               L  L LG NQ++ L ++I+ L NL+ L L +N +   P     +RKL  KC +D E
Sbjct: 361 QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKLLPKCEIDFE 418



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 175/334 (52%), Gaps = 27/334 (8%)

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           ++ LP ++G+LKNL  LDL  N    L KEI     L  L+L +N+L  +P  +G L NL
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L L  N L ++P+ + +  +L + N++   L+ LP  +   L ++  ++L  NK  + 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEI-GQLQNLQELSLLSNKLISL 171

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
           P+    Q  S+ +++  HN+                         T++  ++     L  
Sbjct: 172 PTE-IEQLKSLKNLDLNHNEF------------------------TTVSKEVMLLETLEN 206

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           L+L +N++  + ++I+ L +L+VL+L+ N L  LP  I  L+ LK L+L EN+ +  P E
Sbjct: 207 LDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVE 266

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
           I  LK L  L L  NQLV  P+ +G L +L YLS+  N + ++P E+  L +L  L+L+ 
Sbjct: 267 ILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSG 326

Query: 528 NTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N  +  +P E+    NL+ +SL N  L+ +P EI
Sbjct: 327 NK-ITILPKEILQLKNLEWLSLSNNKLNALPKEI 359



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 120/243 (49%), Gaps = 32/243 (13%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           NLDL+ +  T +   V  L  LE L L  NKL ++P +I  + +L  L L  N LTSLP 
Sbjct: 183 NLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPK 242

Query: 165 SLANLQQLRVLDL-----------------------RHNKLNELPMVVYKLTSLKILYLR 201
            +  LQ L+ L+L                        +N+L E P  V +L SLK L L 
Sbjct: 243 EIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLY 302

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N+I T+  ++  L +L  L +  NKI  LP E+ +LKNL  L L++N L  LPKEIG  
Sbjct: 303 HNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL-----ESVPETLSKCVHLNEFNVE 316
             L  L+L +N+L  +P  +  L NL RL L  N +     E + + L KC    E + E
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISPKEKERIRKLLPKC----EIDFE 418

Query: 317 GCA 319
           G  
Sbjct: 419 GGG 421



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 156/310 (50%), Gaps = 27/310 (8%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           N+   L N  ++  L LS+  L+++P  + +  +L + ++ G   + L   +   L  + 
Sbjct: 32  NLEKALQNPADVRNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQ-LKDLQ 90

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + L+ NK T  P     Q  ++  ++   N++  +P  I  + KNL K+N+ +N LT L
Sbjct: 91  KLNLNNNKLTVLPKE-IGQLQNLQELSLHSNELVNLPKEI-GQFKNLQKLNLDNNKLTVL 148

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L EL+L +N++  L  +I+ L +L+ L L++N    +   +  L  L+ LD
Sbjct: 149 PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLD 208

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ------- 508
           L  NKL+++P EI  LK L+ L+L  NQL SLP+ I  L NL  L++GEN  Q       
Sbjct: 209 LRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEIL 268

Query: 509 ----------------SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                             P+E+G L++L  L L  N  +  +P E+    +LQ + L   
Sbjct: 269 ELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ-ITTLPVEVTQLPDLQELHLSGN 327

Query: 553 PLSQIPSEIV 562
            ++ +P EI+
Sbjct: 328 KITILPKEIL 337



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           K L  ++ N   ++ LDL    L++LPN+IG LK LQ+L L  N+   L + I  L +L 
Sbjct: 31  KNLEKALQNPADVRNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L++  N L  +P+EIG L+NL  L L+ N  + N+P E+    NLQ ++LDN  L+ +P
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELV-NLPKEIGQFKNLQKLNLDNNKLTVLP 149

Query: 559 SEI 561
            EI
Sbjct: 150 KEI 152


>gi|395740179|ref|XP_003777373.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Pongo
           abelii]
          Length = 1780

 Score =  159 bits (401), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 127/394 (32%), Positives = 197/394 (50%), Gaps = 6/394 (1%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLA 155
           RC   ++ ++D    S+  +P  + + +  LEEL L  N+L  LP     + NL  LGL+
Sbjct: 9   RCNR-HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLS 67

Query: 156 ENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYL 215
           +N +  LP  +AN  QL  LD+  N + E+P  +    +L+I     N +  +      L
Sbjct: 68  DNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQL 127

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
            +L+ L++ D  ++ LP ++G L NLVTL+L  N L+ LP  +     L  LDL  N+L 
Sbjct: 128 RSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLE 187

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            +PD LG L NL  L L  N+L ++P  L     L   +V    L  LP   L  L  + 
Sbjct: 188 VLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELP-AELGGLVLLT 246

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
           ++ LS+N     P  G  Q   +  +  + N++ ++   I    +NLS++ + +NLL +L
Sbjct: 247 DLLLSQNLLRRLPD-GIGQLKQLSILKVDQNRLCEVTEAI-GDCENLSELILTENLLMAL 304

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P  LG    LT LN+  N +  L  +I   V L VL L +N L  LP  + +  +L  LD
Sbjct: 305 PRSLGKLTKLTNLNVDRNHLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLD 364

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPR 489
           +  N+L+SLP  +  L  L+ L L  NQ   + R
Sbjct: 365 VAGNRLQSLPFALTHLN-LKALWLAENQAQPMLR 397



 Score =  148 bits (373), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 118/349 (33%), Positives = 163/349 (46%), Gaps = 50/349 (14%)

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
           +Y  +L  L +  N++RELP     L NL  L L+ N ++ LP E+ N   LV LD+  N
Sbjct: 33  RYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRN 92

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
           +   IP+                    +PE++  C  L   +  G  LS LPDG  + L 
Sbjct: 93  D---IPE--------------------IPESIKFCKALEIADFSGNPLSRLPDGF-TQLR 128

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
           S+ ++ L+     A P                         G      NL  + +++NLL
Sbjct: 129 SLAHLALNDVSLQALP-------------------------GDVGNLANLVTLELRENLL 163

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
            SLP  L   V L +L+LG N +  L + +  L NL  L L  N L  LP  +GNLR+L 
Sbjct: 164 KSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLV 223

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
           CLD+ EN+LE LP E+G L  L  L+L  N L  LP  IG L  LS L V +N L  + E
Sbjct: 224 CLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTE 283

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            IG  ENL  L L +N  L  +P  L   + L  +++D   L  +P EI
Sbjct: 284 AIGDCENLSELILTENL-LMALPRSLGKLTKLTNLNVDRNHLEALPPEI 331



 Score =  147 bits (371), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 123/408 (30%), Positives = 193/408 (47%), Gaps = 56/408 (13%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + +  +D RH  L  +P  +Y+ + SL+ L L  N+++ +      L NL  L + DN+I
Sbjct: 12  RHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEI 71

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM-------- 280
           + LPPE+     LV LD++ N + E+P+ I  C  L   D   N L  +PD         
Sbjct: 72  QRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLA 131

Query: 281 ---------------LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
                          +GNL NL  L L  N L+S+P +LS  V L + ++ G  L  LPD
Sbjct: 132 HLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPD 191

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
             L +L ++  + L RN+ +A P         +  ++   N+++++P         L+ +
Sbjct: 192 -TLGALPNLRELWLDRNQLSALPPE-LGNLRRLVCLDVSENRLEELP-AELGGLVLLTDL 248

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
            +  NLL  LP  +G    L+ L +  N++ +++E I +  NL  L+L+ NLL  LP S+
Sbjct: 249 LLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSL 308

Query: 446 GNLRKLKCLDLEENKLESLPNEIG-----------------------FLKELQRLILQSN 482
           G L KL  L+++ N LE+LP EIG                          EL  L +  N
Sbjct: 309 GKLTKLTNLNVDRNHLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGN 368

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSI-----PEEIGTLENLHTLYL 525
           +L SLP A+ HL NL  L + EN  Q +      ++  T E + T YL
Sbjct: 369 RLQSLPFALTHL-NLKALWLAENQAQPMLRFQTEDDARTGEKVLTCYL 415


>gi|418690500|ref|ZP_13251616.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|421128085|ref|ZP_15588303.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421133358|ref|ZP_15593506.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|400360685|gb|EJP16657.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|410022366|gb|EKO89143.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410434552|gb|EKP83690.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 423

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/358 (36%), Positives = 192/358 (53%), Gaps = 4/358 (1%)

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L L F  +KT+   I  L NL  L +  N+   L  E+ +LK+L  L+L +N L  LPKE
Sbjct: 46  LDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKE 105

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           IG    L  L L  NELVN+P  +G   NL +L L  N+L  +P+ + +  +L E ++  
Sbjct: 106 IGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLS 165

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             L SLP  +   L S+ N+ L+ N+FT   S       ++ +++   N++  IP  I  
Sbjct: 166 NKLISLPTEI-EQLKSLKNLDLNNNEFTTV-SKEVMLLETLENLDLRSNKLKTIPKEI-R 222

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           + K+L  + +  N LTSLP ++     L  LNLG N+      +I  L NL  L L  N 
Sbjct: 223 QLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQ 282

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L + P  +G L+ LK L L  N++ +LP E+  L +LQ L L  N++  LP+ I  L NL
Sbjct: 283 LVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNL 342

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            +LS+  N L ++P+EIG L+ L  L L +N  L  +P E+    NLQ + LD+ P+S
Sbjct: 343 EWLSLSNNKLNALPKEIGQLKKLQRLELGNNQ-LTTLPKEIEQLKNLQRLELDSNPIS 399



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 129/381 (33%), Positives = 199/381 (52%), Gaps = 26/381 (6%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++ NLDLS   +  LP  + +L +L++L L GN+   L  +I  + +L  L L  N LT 
Sbjct: 42  DVRNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTV 101

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  LQ L+ L L  N+L  LP  + +  +L+ L L  N++  +  +I  L NL  L
Sbjct: 102 LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQEL 161

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           S+  NK+  LP E+ +LK+L  LDL +N    + KE+     L  LDL+ N+L  IP  +
Sbjct: 162 SLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEI 221

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L +L  L L+ N+L S+P+ + +  +L   N                        L  
Sbjct: 222 RQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLN------------------------LGE 257

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P         +    + +NQ+ + P  +  + K+L  +++  N +T+LP+++  
Sbjct: 258 NRFQIFPVEILELKNLLELNLY-YNQLVEFPKEV-GQLKSLKYLSLYHNQITTLPVEVTQ 315

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L EL+L  N+I+ L ++I  L NLE L LSNN L  LP  IG L+KL+ L+L  N+L
Sbjct: 316 LPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQL 375

Query: 462 ESLPNEIGFLKELQRLILQSN 482
            +LP EI  LK LQRL L SN
Sbjct: 376 TTLPKEIEQLKNLQRLELDSN 396



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 190/370 (51%), Gaps = 26/370 (7%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L +LP++IG + NL  L L  N  T L   +  L+ L+ L+L +NKL  LP  + +L +L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           + L L  N +  +  +I    NL  L++ +NK+  LP E+G+L+NL  L L  N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
            EI     L  LDL +NE   +   +  L  L  L L  N+L+++P+ + +   L    +
Sbjct: 173 TEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
            G  L+SLP  +   L ++  + L  N+F  +P         +    + +NQ+ + P  +
Sbjct: 233 TGNQLTSLPKEI-EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY-YNQLVEFPKEV 290

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             + K+L  +++  N +T+LP+++     L EL+L  N+I+ L ++I  L NLE L LSN
Sbjct: 291 -GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSN 349

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N                       KL +LP EIG LK+LQRL L +NQL +LP+ I  L 
Sbjct: 350 N-----------------------KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK 386

Query: 496 NLSYLSVGEN 505
           NL  L +  N
Sbjct: 387 NLQRLELDSN 396



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 187/360 (51%), Gaps = 8/360 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  +  T L   + +L  L++L L  NKL  LP +IG + NL  L L  N L 
Sbjct: 64  KNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELV 123

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +   + L+ L+L +NKL  LP  + +L +L+ L L  N++ ++  +I+ L +L  
Sbjct: 124 NLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKN 183

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N+   +  E+  L+ L  LDL  N L+ +PKEI     L  L L  N+L ++P  
Sbjct: 184 LDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKE 243

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  NR +  P  + +  +L E N+    L   P   +  L S+  ++L 
Sbjct: 244 IEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKE-VGQLKSLKYLSLY 302

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P    TQ   +  ++   N+I  +P  I  + KNL  +++ +N L +LP ++G
Sbjct: 303 HNQITTLPV-EVTQLPDLQELHLSGNKITILPKEIL-QLKNLEWLSLSNNKLNALPKEIG 360

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL--KC-LDLE 457
               L  L LG NQ++ L ++I+ L NL+ L L +N +   P     +RKL  KC +D E
Sbjct: 361 QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKLLPKCEIDFE 418



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 175/334 (52%), Gaps = 27/334 (8%)

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           ++ LP ++G+LKNL  LDL  N    L KEI     L  L+L +N+L  +P  +G L NL
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L L  N L ++P+ + +  +L + N++   L+ LP  +   L ++  ++L  NK  + 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEI-GQLQNLQELSLLSNKLISL 171

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
           P+                            + K+L  +++ +N  T++  ++     L  
Sbjct: 172 PTE-------------------------IEQLKSLKNLDLNNNEFTTVSKEVMLLETLEN 206

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           L+L +N++  + ++I+ L +L+VL+L+ N L  LP  I  L+ LK L+L EN+ +  P E
Sbjct: 207 LDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVE 266

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
           I  LK L  L L  NQLV  P+ +G L +L YLS+  N + ++P E+  L +L  L+L+ 
Sbjct: 267 ILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSG 326

Query: 528 NTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N  +  +P E+    NL+ +SL N  L+ +P EI
Sbjct: 327 NK-ITILPKEILQLKNLEWLSLSNNKLNALPKEI 359



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 147/261 (56%), Gaps = 3/261 (1%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           +N+ KE  + K  N+  L+L  + +T LP  + +L +L+EL L  NKL SLP++I  + +
Sbjct: 123 VNLPKEIGQFK--NLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKS 180

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L L  N  T++   +  L+ L  LDLR NKL  +P  + +L SLK+L L  N++ ++
Sbjct: 181 LKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSL 240

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
             +I+ L NL  L++ +N+ +  P E+ ELKNL+ L+L +N L E PKE+G    L  L 
Sbjct: 241 PKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLS 300

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
           L HN++  +P  +  L +L  L LS N++  +P+ + +  +L   ++    L++LP   +
Sbjct: 301 LYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKE-I 359

Query: 329 SSLTSINNITLSRNKFTAYPS 349
             L  +  + L  N+ T  P 
Sbjct: 360 GQLKKLQRLELGNNQLTTLPK 380



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 120/243 (49%), Gaps = 32/243 (13%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           NLDL+ +  T +   V  L  LE L L  NKL ++P +I  + +L  L L  N LTSLP 
Sbjct: 183 NLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPK 242

Query: 165 SLANLQQLRVLDL-----------------------RHNKLNELPMVVYKLTSLKILYLR 201
            +  LQ L+ L+L                        +N+L E P  V +L SLK L L 
Sbjct: 243 EIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLY 302

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N+I T+  ++  L +L  L +  NKI  LP E+ +LKNL  L L++N L  LPKEIG  
Sbjct: 303 HNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL-----ESVPETLSKCVHLNEFNVE 316
             L  L+L +N+L  +P  +  L NL RL L  N +     E + + L KC    E + E
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISPKEKERIRKLLPKC----EIDFE 418

Query: 317 GCA 319
           G  
Sbjct: 419 GGG 421



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 156/310 (50%), Gaps = 27/310 (8%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           N+   L N  ++  L LS+  L+++P  + +  +L + ++ G   + L   +   L  + 
Sbjct: 32  NLEKALQNPADVRNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQ-LKDLQ 90

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + L+ NK T  P     Q  ++  ++   N++  +P  I  + KNL K+N+ +N LT L
Sbjct: 91  KLNLNNNKLTVLPKE-IGQLQNLQELSLHSNELVNLPKEI-GQFKNLQKLNLDNNKLTVL 148

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L EL+L +N++  L  +I+ L +L+ L L+NN    +   +  L  L+ LD
Sbjct: 149 PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLD 208

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ------- 508
           L  NKL+++P EI  LK L+ L+L  NQL SLP+ I  L NL  L++GEN  Q       
Sbjct: 209 LRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEIL 268

Query: 509 ----------------SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                             P+E+G L++L  L L  N  +  +P E+    +LQ + L   
Sbjct: 269 ELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ-ITTLPVEVTQLPDLQELHLSGN 327

Query: 553 PLSQIPSEIV 562
            ++ +P EI+
Sbjct: 328 KITILPKEIL 337



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           K L  ++ N   ++ LDL    L++LPN+IG LK LQ+L L  N+   L + I  L +L 
Sbjct: 31  KNLEKALQNPADVRNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L++  N L  +P+EIG L+NL  L L+ N  + N+P E+    NLQ ++LDN  L+ +P
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELV-NLPKEIGQFKNLQKLNLDNNKLTVLP 149

Query: 559 SEI 561
            EI
Sbjct: 150 KEI 152


>gi|340713142|ref|XP_003395107.1| PREDICTED: protein lap4-like isoform 3 [Bombus terrestris]
          Length = 2051

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 195/394 (49%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L  +P  + + + SL+ L L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEYIDKRHCSLPCVPDDILRYSRSLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P+ I N   L   D   N +  +P     L NLT
Sbjct: 73  HRLPPDIQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L SLP+ L S L  +  + L  N     P
Sbjct: 133 VLGLNDMSLTNLPPDFGSLEALQSLELRENLLKSLPESL-SQLYKLERLDLGDNDIEVLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
           +                  I K+P         L ++ +  N L  LP ++G    L  L
Sbjct: 192 A-----------------HIGKLPA--------LQELWLDHNQLQHLPPEIGELKTLACL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++  L E+I  L +L  L LS N+++KLP  +G L+KL  L +++N+L +L + I
Sbjct: 227 DVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKLTILKVDQNRLSTLNSNI 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + LQ LIL  N L+ LP  IG L NL+ L+V  N+LQS+P EIG L+ L  L L DN
Sbjct: 287 GRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P E+  C+ L ++ +    L  +P  ++
Sbjct: 347 K-LQYLPIEVGQCTALHVLDVSGNRLQYLPYSLI 379



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 172/336 (51%), Gaps = 27/336 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P +++ L  L+      N +  LP+    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L+ L+ L+LR N L  LP  + +L  L+ L L  N I+ +   I  L  L  
Sbjct: 143 NLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPE+GELK L  LD++ N LE+LP+EIG    L  L L  N +  +PD 
Sbjct: 203 LWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           LG L  LT L++  NRL ++   + +C +L E  +    L  LP   +  L ++NN+ + 
Sbjct: 263 LGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELP-VTIGKLHNLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN   + P+                              K L  ++++DN L  LP+++G
Sbjct: 322 RNSLQSLPTE-------------------------IGNLKQLGVLSLRDNKLQYLPIEVG 356

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
               L  L++  N++  L   + NL NL+ + LS N
Sbjct: 357 QCTALHVLDVSGNRLQYLPYSLINL-NLKAVWLSKN 391



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 169/358 (47%), Gaps = 26/358 (7%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  + I  LP +  +L  L +L L  N++  LP  I    NL  L ++ N +  +P+++ 
Sbjct: 44  LDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDIPENIK 103

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
           NL+ L+V D   N +  LP    +L +L +L L    +  + PD   L  L  L +R+N 
Sbjct: 104 NLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENL 163

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           ++ LP  L +L  L  LDL  N +E LP  IG    L  L L HN+L ++P  +G L  L
Sbjct: 164 LKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGELKTL 223

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L +S NRLE +PE +     L + ++    +  LPDG L  L  +  + + +N+ +  
Sbjct: 224 ACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDG-LGELQKLTILKVDQNRLSTL 282

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
            S                            R +NL ++ + +N L  LP+ +G    L  
Sbjct: 283 NSN-------------------------IGRCENLQELILTENFLLELPVTIGKLHNLNN 317

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
           LN+  N +  L  +I NL  L VL L +N L+ LP  +G    L  LD+  N+L+ LP
Sbjct: 318 LNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLP 375


>gi|350417077|ref|XP_003491245.1| PREDICTED: protein lap4-like isoform 3 [Bombus impatiens]
          Length = 1835

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 195/394 (49%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L  +P  + + + SL+ L L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEYIDKRHCSLPCVPDDILRYSRSLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P+ I N   L   D   N +  +P     L NLT
Sbjct: 73  HRLPPDIQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L SLP+ L S L  +  + L  N     P
Sbjct: 133 VLGLNDMSLTNLPPDFGSLEALQSLELRENLLKSLPESL-SQLYKLERLDLGDNDIEVLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
           +                  I K+P         L ++ +  N L  LP ++G    L  L
Sbjct: 192 A-----------------HIGKLPA--------LQELWLDHNQLQHLPPEIGELKTLACL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++  L E+I  L +L  L LS N+++KLP  +G L+KL  L +++N+L +L + I
Sbjct: 227 DVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKLTILKVDQNRLSTLNSNI 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + LQ LIL  N L+ LP  IG L NL+ L+V  N+LQS+P EIG L+ L  L L DN
Sbjct: 287 GRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P E+  C+ L ++ +    L  +P  ++
Sbjct: 347 K-LQYLPIEVGQCTALHVLDVSGNRLQYLPYSLI 379



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 172/336 (51%), Gaps = 27/336 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P +++ L  L+      N +  LP+    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L+ L+ L+LR N L  LP  + +L  L+ L L  N I+ +   I  L  L  
Sbjct: 143 NLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPE+GELK L  LD++ N LE+LP+EIG    L  L L  N +  +PD 
Sbjct: 203 LWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           LG L  LT L++  NRL ++   + +C +L E  +    L  LP   +  L ++NN+ + 
Sbjct: 263 LGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELP-VTIGKLHNLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN   + P+                              K L  ++++DN L  LP+++G
Sbjct: 322 RNSLQSLPTE-------------------------IGNLKQLGVLSLRDNKLQYLPIEVG 356

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
               L  L++  N++  L   + NL NL+ + LS N
Sbjct: 357 QCTALHVLDVSGNRLQYLPYSLINL-NLKAVWLSKN 391



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 169/358 (47%), Gaps = 26/358 (7%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  + I  LP +  +L  L +L L  N++  LP  I    NL  L ++ N +  +P+++ 
Sbjct: 44  LDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDIPENIK 103

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
           NL+ L+V D   N +  LP    +L +L +L L    +  + PD   L  L  L +R+N 
Sbjct: 104 NLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENL 163

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           ++ LP  L +L  L  LDL  N +E LP  IG    L  L L HN+L ++P  +G L  L
Sbjct: 164 LKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGELKTL 223

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L +S NRLE +PE +     L + ++    +  LPDG L  L  +  + + +N+ +  
Sbjct: 224 ACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDG-LGELQKLTILKVDQNRLSTL 282

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
            S                            R +NL ++ + +N L  LP+ +G    L  
Sbjct: 283 NSN-------------------------IGRCENLQELILTENFLLELPVTIGKLHNLNN 317

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
           LN+  N +  L  +I NL  L VL L +N L+ LP  +G    L  LD+  N+L+ LP
Sbjct: 318 LNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLP 375


>gi|441637621|ref|XP_003260231.2| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 7 [Nomascus leucogenys]
          Length = 1578

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 191/388 (49%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+    +L+ LYL  N+I+ +   +     L  LS+ DN +  
Sbjct: 62  ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSN 121

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 122 LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 181

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    +   L    +    L +LP  +   L  +  + L  N+F   P  
Sbjct: 182 YLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSM-HKLAQLERLDLGNNEFGELPE- 239

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  + +NL ++ M +N L  LP  +G    L  L++
Sbjct: 240 ------------------------VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDM 275

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI     LE L+LS+N+L++LP SIG L+KL  L +++N+L  LPN IG 
Sbjct: 276 SKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGN 335

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG+ +N+  + L  N  
Sbjct: 336 LSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNK- 394

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 395 LEFLPEEIGQMQKLRVLNLSDNRLKNLP 422



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 202/443 (45%), Gaps = 50/443 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V      LEELYL  N++  LP Q            
Sbjct: 55  FRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQ------------ 102

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                      L N Q LR L +  N L+ LP  +  L +LK L +  N ++    +I+ 
Sbjct: 103 -----------LFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKC 151

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L NL  L L    LE LP   G    L  L+L+ N L
Sbjct: 152 CKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHL 211

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    +PE L +  +L E  ++  AL  LP G +  L  +
Sbjct: 212 KTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLP-GSIGKLKML 270

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N+              + +++ +            S  + L  + +  N+L  
Sbjct: 271 VYLDMSKNR--------------IETVDMD-----------ISGCEALEDLLLSSNMLQQ 305

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    LT L +  NQ++ L   I NL  LE    S N L+ LPS+IG L  L+ L
Sbjct: 306 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 365

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            ++EN L  LP EIG  K +  + L+SN+L  LP  IG +  L  L++ +N L+++P   
Sbjct: 366 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 425

Query: 515 GTLENLHTLYLNDNTCLNNIPFE 537
             L+ L  L+L+DN     IP +
Sbjct: 426 TKLKELAALWLSDNQSKALIPLQ 448



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 180/390 (46%), Gaps = 50/390 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD+SK+ +   P +++    L  +    N ++ LP     + NLT L L +  L  
Sbjct: 131 NLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEF 190

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP +   L +LR+L+LR N L  LP  ++KL  L+ L L  N    +   +  + NL  L
Sbjct: 191 LPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLREL 250

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            M +N ++ LP  +G+LK LV LD++ N +E +  +I  C  L  L L  N L  +PD +
Sbjct: 251 WMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSI 310

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  LT L++  N+L  +P T+     L EF+     L SLP                 
Sbjct: 311 GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPS---------------- 354

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                             +I + H               +L  + + +N L  LP ++G+
Sbjct: 355 ------------------TIGYLH---------------SLRTLAVDENFLPELPREIGS 381

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              +T ++L +N++  L E+I  +  L VL LS+N LK LP S   L++L  L L +N+ 
Sbjct: 382 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQS 441

Query: 462 ESL-PNEIGFLKELQRLILQSNQLVSLPRA 490
           ++L P +     E ++ +L +      PR 
Sbjct: 442 KALIPLQTEAHPETKQRVLTNYMFPQQPRG 471



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 183/402 (45%), Gaps = 61/402 (15%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + K+   C+   +  L +  + +++LP ++  L +L+EL +  N +   P  I     LT
Sbjct: 99  LPKQLFNCQA--LRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLT 156

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            +  + N ++ LPD    L  L  L L    L  LP    +L  L+IL LR N +KT+  
Sbjct: 157 IIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPK 216

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
            +  L+ L  L + +N+  ELP  L +++NL  L + +N L+ LP  IG   MLV LD  
Sbjct: 217 SMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLD-- 274

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLL 328
                                +S NR+E+V   +S C  L +  +    L  LPD  GLL
Sbjct: 275 ---------------------MSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLL 313

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
             LT                           ++  + NQ+  +P  I     NLS +   
Sbjct: 314 KKLT---------------------------TLKVDDNQLTMLPNTI----GNLSLLEEF 342

Query: 389 D---NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           D   N L SLP  +G    L  L +  N + +L  +I +  N+ V+ L +N L+ LP  I
Sbjct: 343 DCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 402

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           G ++KL+ L+L +N+L++LP     LKEL  L L  NQ  +L
Sbjct: 403 GQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 444


>gi|350417075|ref|XP_003491244.1| PREDICTED: protein lap4-like isoform 2 [Bombus impatiens]
          Length = 1759

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 195/394 (49%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L  +P  + + + SL+ L L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEYIDKRHCSLPCVPDDILRYSRSLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P+ I N   L   D   N +  +P     L NLT
Sbjct: 73  HRLPPDIQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L SLP+ L S L  +  + L  N     P
Sbjct: 133 VLGLNDMSLTNLPPDFGSLEALQSLELRENLLKSLPESL-SQLYKLERLDLGDNDIEVLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
           +                  I K+P         L ++ +  N L  LP ++G    L  L
Sbjct: 192 A-----------------HIGKLPA--------LQELWLDHNQLQHLPPEIGELKTLACL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++  L E+I  L +L  L LS N+++KLP  +G L+KL  L +++N+L +L + I
Sbjct: 227 DVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKLTILKVDQNRLSTLNSNI 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + LQ LIL  N L+ LP  IG L NL+ L+V  N+LQS+P EIG L+ L  L L DN
Sbjct: 287 GRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P E+  C+ L ++ +    L  +P  ++
Sbjct: 347 K-LQYLPIEVGQCTALHVLDVSGNRLQYLPYSLI 379



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 172/336 (51%), Gaps = 27/336 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P +++ L  L+      N +  LP+    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L+ L+ L+LR N L  LP  + +L  L+ L L  N I+ +   I  L  L  
Sbjct: 143 NLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPE+GELK L  LD++ N LE+LP+EIG    L  L L  N +  +PD 
Sbjct: 203 LWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           LG L  LT L++  NRL ++   + +C +L E  +    L  LP   +  L ++NN+ + 
Sbjct: 263 LGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELP-VTIGKLHNLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN   + P+                              K L  ++++DN L  LP+++G
Sbjct: 322 RNSLQSLPTE-------------------------IGNLKQLGVLSLRDNKLQYLPIEVG 356

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
               L  L++  N++  L   + NL NL+ + LS N
Sbjct: 357 QCTALHVLDVSGNRLQYLPYSLINL-NLKAVWLSKN 391



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 169/358 (47%), Gaps = 26/358 (7%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  + I  LP +  +L  L +L L  N++  LP  I    NL  L ++ N +  +P+++ 
Sbjct: 44  LDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDIPENIK 103

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
           NL+ L+V D   N +  LP    +L +L +L L    +  + PD   L  L  L +R+N 
Sbjct: 104 NLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENL 163

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           ++ LP  L +L  L  LDL  N +E LP  IG    L  L L HN+L ++P  +G L  L
Sbjct: 164 LKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGELKTL 223

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L +S NRLE +PE +     L + ++    +  LPDG L  L  +  + + +N+ +  
Sbjct: 224 ACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDG-LGELQKLTILKVDQNRLSTL 282

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
            S                            R +NL ++ + +N L  LP+ +G    L  
Sbjct: 283 NSN-------------------------IGRCENLQELILTENFLLELPVTIGKLHNLNN 317

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
           LN+  N +  L  +I NL  L VL L +N L+ LP  +G    L  LD+  N+L+ LP
Sbjct: 318 LNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLP 375


>gi|434388110|ref|YP_007098721.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
 gi|428019100|gb|AFY95194.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
          Length = 563

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 146/441 (33%), Positives = 230/441 (52%), Gaps = 42/441 (9%)

Query: 121 EKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHN 180
           +++THL+   LY  +L  LP++I  + +L  L +++N L +LP+++ N            
Sbjct: 16  DRITHLD---LYQQRLTQLPARIVDIHSLVSLRVSDNELITLPENIGN------------ 60

Query: 181 KLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKN 240
                      L+SL+ L L  N++  +   I +L+NL  LS+  NK +  P  +  L N
Sbjct: 61  -----------LSSLRELRLYKNQLSALPGSISHLTNLVSLSLSFNKFKIFPDIIASLIN 109

Query: 241 LVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLR-LSYNRLES 299
           L  L L  N ++ LP+ +     LV++DL  N + ++  +L +L NL  ++ L  N    
Sbjct: 110 LKELKLNGNQIDILPESLLQLKKLVSIDLSSNPIFDL-SILQSLPNLNHVKFLGVNLPCE 168

Query: 300 VPETLSKCVHLNEFNVEGCALS-SLPDG--LLSSLTSINNITLSRNKFTAYPSGGPTQFT 356
               LSK   +   N +G      LP+   L  +L   N I LS N+   Y         
Sbjct: 169 YWVDLSKSTFIIRSNNDGSTSEIELPNANKLSLNLRKQNLIILS-NEIGVY--------K 219

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS 416
               +   HN ++ +P  I     NLS + + +N LTSLP  +G    L  L+L  N+++
Sbjct: 220 WCQHLKLSHNYLNSLPDNI-DELSNLSHLKLLNNQLTSLPESVGDLEKLISLDLRRNKLT 278

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
           +L + I NL NL+ L L +NLL+KLP++IGNL++L+ L L  NKL SLP E+G  K+L  
Sbjct: 279 ELPDSIGNLKNLKYLYLDDNLLEKLPATIGNLKQLEYLHLSANKLTSLPEELGECKKLSY 338

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
           L ++ NQ+V L  +IG L+NL  L    N + S+P+EIG L NL  L L++N  +  +P 
Sbjct: 339 LDVRFNQIVKLESSIGKLSNLIELDAFRNKIASLPDEIGGLCNLQHLQLDENH-IKKLPE 397

Query: 537 ELALCSNLQIMSLDNCPLSQI 557
            L + S L  +SL + P+S I
Sbjct: 398 TLKMLSKLTSISLIDNPVSDI 418



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 206/444 (46%), Gaps = 49/444 (11%)

Query: 88  DLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVT 147
           D  +E    R  ++ I +LDL +  +T LP  +  +  L  L +  N+L +LP  IG ++
Sbjct: 3   DFALEALIDRAIQDRITHLDLYQQRLTQLPARIVDIHSLVSLRVSDNELITLPENIGNLS 62

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
           +L  L L +N L++LP S+++L  L  L L  NK    P ++  L +LK L L  N+I  
Sbjct: 63  SLRELRLYKNQLSALPGSISHLTNLVSLSLSFNKFKIFPDIIASLINLKELKLNGNQIDI 122

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELP-----PELGELKNLVTLDLAHNHLEELPK------ 256
           +   +  L  L  + +  N I +L      P L  +K  + ++L   +  +L K      
Sbjct: 123 LPESLLQLKKLVSIDLSSNPIFDLSILQSLPNLNHVK-FLGVNLPCEYWVDLSKSTFIIR 181

Query: 257 ----------EIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK 306
                     E+ N   L +L+L+   L+ + + +G       L+LS+N L S+P+ + +
Sbjct: 182 SNNDGSTSEIELPNANKL-SLNLRKQNLIILSNEIGVYKWCQHLKLSHNYLNSLPDNIDE 240

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
             +L+   +    L+SLP+  +  L  + ++ L RNK T  P                  
Sbjct: 241 LSNLSHLKLLNNQLTSLPES-VGDLEKLISLDLRRNKLTELPDS---------------- 283

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
                        KNL  + + DNLL  LP  +G    L  L+L  N+++ L E++    
Sbjct: 284 ---------IGNLKNLKYLYLDDNLLEKLPATIGNLKQLEYLHLSANKLTSLPEELGECK 334

Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
            L  L +  N + KL SSIG L  L  LD   NK+ SLP+EIG L  LQ L L  N +  
Sbjct: 335 KLSYLDVRFNQIVKLESSIGKLSNLIELDAFRNKIASLPDEIGGLCNLQHLQLDENHIKK 394

Query: 487 LPRAIGHLTNLSYLSVGENNLQSI 510
           LP  +  L+ L+ +S+ +N +  I
Sbjct: 395 LPETLKMLSKLTSISLIDNPVSDI 418



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 107/246 (43%), Gaps = 44/246 (17%)

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +  ++    ++ ++P  I     +L  + + DN L +LP ++G    L EL L  NQ+S 
Sbjct: 18  ITHLDLYQQRLTQLPARIVD-IHSLVSLRVSDNELITLPENIGNLSSLRELRLYKNQLSA 76

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L   I +L NL  L LS N  K  P  I +L  LK L L  N+++ LP  +  LK+L  +
Sbjct: 77  LPGSISHLTNLVSLSLSFNKFKIFPDIIASLINLKELKLNGNQIDILPESLLQLKKLVSI 136

Query: 478 ILQSNQL--VSLPRAIGHLTNLSYLSVG-------------------------------- 503
            L SN +  +S+ +++ +L ++ +L V                                 
Sbjct: 137 DLSSNPIFDLSILQSLPNLNHVKFLGVNLPCEYWVDLSKSTFIIRSNNDGSTSEIELPNA 196

Query: 504 --------ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
                   + NL  +  EIG  +    L L+ N  LN++P  +   SNL  + L N  L+
Sbjct: 197 NKLSLNLRKQNLIILSNEIGVYKWCQHLKLSHNY-LNSLPDNIDELSNLSHLKLLNNQLT 255

Query: 556 QIPSEI 561
            +P  +
Sbjct: 256 SLPESV 261


>gi|198451591|ref|XP_001358430.2| GA18897 [Drosophila pseudoobscura pseudoobscura]
 gi|198131558|gb|EAL27569.2| GA18897 [Drosophila pseudoobscura pseudoobscura]
          Length = 1889

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 122/364 (33%), Positives = 177/364 (48%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P  ++ L  L+      N +  LPS    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFTQLKNLTILGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L QL  L+LR N L  LP  + +LT LK L L  N I+ + P + YL  L  
Sbjct: 143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG L  L  LD++ N LEELP EI     L  LDL  N L  +PD 
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  LT L+L  NRL+ + +TL  C ++ E  +    LS LP   +  +T ++N+ + 
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLGNCDNMQELILTENFLSELP-ASIGRMTKLSNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN                                                 L  LPL++G
Sbjct: 322 RNA------------------------------------------------LEYLPLEIG 333

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N++ +L  ++ N   L VL +S N L  LP S+ NL +LK + L EN+
Sbjct: 334 QCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 SQPL 396



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 207/424 (48%), Gaps = 51/424 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +D    S+  +P  + + +  LEEL+L  N +  LP     +  L  LGL++N +  LP 
Sbjct: 18  VDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPP 77

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            + N + L  LD+  N + ++P  +  L SL++     N I  +      L NL++L + 
Sbjct: 78  DIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFTQLKNLTILGLN 137

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           D  +  LP + G L  L +L+L  N L+ LP+ I   T L  LDL  NE+ ++P  LG L
Sbjct: 138 DMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYL 197

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             L  L L +N+L+ +P  L                     GLL+ LT ++   +S N+ 
Sbjct: 198 PGLHELWLDHNQLQRLPPEL---------------------GLLTKLTYLD---VSENRL 233

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
              P                 N+I     G+ S    L+ +++  NLL +LP  +     
Sbjct: 234 EELP-----------------NEIS----GLVS----LTDLDLAQNLLETLPDGIAKLSR 268

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LT L L  N++ +L++ + N  N++ L+L+ N L +LP+SIG + KL  L+++ N LE L
Sbjct: 269 LTILKLDQNRLQRLNDTLGNCDNMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYL 328

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P EIG    L  L L+ N+L  LP  +G+ T L  L V  N L  +P  +  L+ L  ++
Sbjct: 329 PLEIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQ-LKAVW 387

Query: 525 LNDN 528
           L++N
Sbjct: 388 LSEN 391



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  + + + +L+ L+L  N I+ +  +   L+ L  L + DN+I
Sbjct: 13  RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P +I +   L   D   N +  +P     L NLT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFTQLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L  LP+  +S LT +  + L  N+    P
Sbjct: 133 ILGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                                  PY        L ++ +  N L  LP +LG    LT L
Sbjct: 192 -----------------------PY--LGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L  +I  LV+L  L L+ NLL+ LP  I  L +L  L L++N+L+ L + +
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQRLNDTL 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G    +Q LIL  N L  LP +IG +T LS L+V  N L+ +P EIG   NL  L L DN
Sbjct: 287 GNCDNMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL  C+ L ++ +    L  +P  +V
Sbjct: 347 K-LKRLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 28/393 (7%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           + +E LR     +  L L  + I  LP +  +L  L +L L  N++  LP  I    NL 
Sbjct: 28  VPEEILRYSR-TLEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLV 86

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L ++ N +  +PD + +LQ L+V D   N + +LP    +L +L IL L    + T+  
Sbjct: 87  ELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFTQLKNLTILGLNDMSLTTLPA 146

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           D   L+ L  L +R+N ++ LP  + +L  L  LDL  N +E+LP  +G    L  L L 
Sbjct: 147 DFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           HN+L  +P  LG L  LT L +S NRLE +P  +S  V L + ++    L +LPDG    
Sbjct: 207 HNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDG---- 262

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           +  ++ +T+                     +  + N++ ++         N+ ++ + +N
Sbjct: 263 IAKLSRLTI---------------------LKLDQNRLQRL-NDTLGNCDNMQELILTEN 300

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L+ LP  +G    L+ LN+  N +  L  +I    NL VL L +N LK+LP  +GN   
Sbjct: 301 FLSELPASIGRMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTV 360

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  LD+  N+L  LP  +  L +L+ + L  NQ
Sbjct: 361 LHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQ 392


>gi|410920716|ref|XP_003973829.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Takifugu
           rubripes]
          Length = 597

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 158/515 (30%), Positives = 259/515 (50%), Gaps = 68/515 (13%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL  + ++ LP ++++L  L++L L  N+L SLP+ +  + NL  L L  N L SLP+ 
Sbjct: 108 LDLDDNQLSCLPEALQELQELQQLRLSHNQLTSLPAWVANLKNLASLALQFNLLVSLPEE 167

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L +L+ L  LDL +N+L +LP  V  LT L+ L L  N++  +   I  L+ + ML   +
Sbjct: 168 LGHLKSLIELDLSNNQLKDLPANVGCLTCLQKLNLSHNKLSWLPDSIGQLTKVKMLDCSN 227

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEEL----------------------PKEIGNCTM 263
           N++ E+P  L ++  L  L L HN L+ L                      P+++ + T 
Sbjct: 228 NQLTEVPASLSQMSALEQLYLRHNKLDLLPNLKSPVLKDLYFGNNQIEQLEPEQLSSLTA 287

Query: 264 LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSL 323
           +  L+L+ N++ ++P+ +  L +LTRL L+ N + S+P +L    HL    +EG  L  L
Sbjct: 288 ISVLELRDNKIRSLPEEITLLSSLTRLDLTNNDISSLPASLGLLSHLKVVLLEGNPLRGL 347

Query: 324 PDGLLSSLTSINNITLSRNKFT---AYPSGGPTQFT--SVYSINFEHN------------ 366
              LL+  T+   +   R + T   A  +  PT  T  S   +NF HN            
Sbjct: 348 RRDLLTKGTT-ELLKYLRGRITESSASAAEEPTAMTLPSQAKVNF-HNIQTLKMLQYSEK 405

Query: 367 QIDKIPYGIFSRAKN--LSKVNMKDNLLTSLPLDLGTW-VGLTELNLGTNQISKLSEDIQ 423
           Q   IP  +F  A N  ++ VN   NLLTS+P  L  +   L+++NLG N+++   + I 
Sbjct: 406 QTAAIPDEVFDAAVNQGVTAVNFSKNLLTSIPPRLLEFQSSLSDINLGFNRLAG-CDPIC 464

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           +L+ L  + L NN + +LP+ + NL KL+ + L  N  +S P  +  +  L+ ++L +NQ
Sbjct: 465 SLLQLTHIDLRNNQMAELPAEMKNLTKLRSIILNYNGFKSFPGVLYQIVSLETILLGNNQ 524

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
           +  +  +  HL  LS+LS                    TL L++N  L  IP EL LC++
Sbjct: 525 VDGVDPS--HLMKLSHLS--------------------TLDLSNNDLL-KIPPELGLCTS 561

Query: 544 LQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGP 578
           L+ +SL+  P     + IV  G   ++ YL+ + P
Sbjct: 562 LRCLSLEGNPFRAPRAAIVAKGTDAVMEYLRSRIP 596



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 213/461 (46%), Gaps = 77/461 (16%)

Query: 124 THLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLN 183
           T L +L L  N+L  L   I  +  LT L L +N L+ LP++L  LQ+L+ L L HN+L 
Sbjct: 80  TDLTKLLLASNQLTQLSDDIRLLPALTVLDLDDNQLSCLPEALQELQELQQLRLSHNQLT 139

Query: 184 ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVT 243
            LP  V  L +L  L L+FN + +                       LP ELG LK+L+ 
Sbjct: 140 SLPAWVANLKNLASLALQFNLLVS-----------------------LPEELGHLKSLIE 176

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           LDL++N L++LP  +G  T L  L+L HN+L  +PD +G L  +  L  S N+L  VP +
Sbjct: 177 LDLSNNQLKDLPANVGCLTCLQKLNLSHNKLSWLPDSIGQLTKVKMLDCSNNQLTEVPAS 236

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           LS+                        ++++  + L  NK    P+        +Y   F
Sbjct: 237 LSQ------------------------MSALEQLYLRHNKLDLLPNLKSPVLKDLY---F 269

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
            +NQI+++     S    +S + ++DN + SLP ++     LT L+L  N IS L   + 
Sbjct: 270 GNNQIEQLEPEQLSSLTAISVLELRDNKIRSLPEEITLLSSLTRLDLTNNDISSLPASLG 329

Query: 424 NLVNLEVLVLSNNLLKKLPSSI-------------GNLRKLKCLDLEENKLESLPNE--I 468
            L +L+V++L  N L+ L   +             G + +      EE    +LP++  +
Sbjct: 330 LLSHLKVVLLEGNPLRGLRRDLLTKGTTELLKYLRGRITESSASAAEEPTAMTLPSQAKV 389

Query: 469 GF--LKELQRLILQSNQLVSLPRAIGHLT---NLSYLSVGENNLQSIPEEIGTLENLHTL 523
            F  ++ L+ L     Q  ++P  +        ++ ++  +N L SIP  +   ++    
Sbjct: 390 NFHNIQTLKMLQYSEKQTAAIPDEVFDAAVNQGVTAVNFSKNLLTSIPPRLLEFQS---- 445

Query: 524 YLND-NTCLNNIPFELALCSNLQIMSLD--NCPLSQIPSEI 561
            L+D N   N +     +CS LQ+  +D  N  ++++P+E+
Sbjct: 446 SLSDINLGFNRLAGCDPICSLLQLTHIDLRNNQMAELPAEM 486



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 151/301 (50%), Gaps = 29/301 (9%)

Query: 190 YKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHN 249
           ++ T L  L L  N++  +  DI+ L  L++L + DN++  LP  L EL+ L  L L+HN
Sbjct: 77  WEQTDLTKLLLASNQLTQLSDDIRLLPALTVLDLDDNQLSCLPEALQELQELQQLRLSHN 136

Query: 250 HLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVH 309
            L  LP  + N   L +L LQ N LV++P+ LG+L +L  L LS N+L+ +P  +     
Sbjct: 137 QLTSLPAWVANLKNLASLALQFNLLVSLPEELGHLKSLIELDLSNNQLKDLPANVGCLTC 196

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
           L + N+    LS LPD  +  LT +  +  S N+ T  P+   +Q +++  +   HN++D
Sbjct: 197 LQKLNLSHNKLSWLPDS-IGQLTKVKMLDCSNNQLTEVPA-SLSQMSALEQLYLRHNKLD 254

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS-EDIQNLVNL 428
            +P        NL    +KD                  L  G NQI +L  E + +L  +
Sbjct: 255 LLP--------NLKSPVLKD------------------LYFGNNQIEQLEPEQLSSLTAI 288

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
            VL L +N ++ LP  I  L  L  LDL  N + SLP  +G L  L+ ++L+ N L  L 
Sbjct: 289 SVLELRDNKIRSLPEEITLLSSLTRLDLTNNDISSLPASLGLLSHLKVVLLEGNPLRGLR 348

Query: 489 R 489
           R
Sbjct: 349 R 349



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 1/116 (0%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C    + ++DL  + +  LP  ++ LT L  + L  N   S P  +  + +L  + L  N
Sbjct: 464 CSLLQLTHIDLRNNQMAELPAEMKNLTKLRSIILNYNGFKSFPGVLYQIVSLETILLGNN 523

Query: 158 SLTSL-PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
            +  + P  L  L  L  LDL +N L ++P  +   TSL+ L L  N  +     I
Sbjct: 524 QVDGVDPSHLMKLSHLSTLDLSNNDLLKIPPELGLCTSLRCLSLEGNPFRAPRAAI 579


>gi|356577797|ref|XP_003557009.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g08850-like [Glycine max]
          Length = 1204

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 156/482 (32%), Positives = 250/482 (51%), Gaps = 44/482 (9%)

Query: 102 NILNLDLSKSSITH-LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSL 159
           NIL L++S +S+   +PP +  L+ L  L L  N L+  +PS IG ++NL  L   +NSL
Sbjct: 101 NILTLNMSHNSLNGTIPPQIGSLSKLARLDLSDNFLSGEIPSTIGNLSNLYYLSFYDNSL 160

Query: 160 T-SLPDSLANLQQLRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           + ++P S+ NL  L  + L  NKL+  +P +                       I  LS 
Sbjct: 161 SGAIPSSIGNLVNLDSMILHKNKLSGSIPFI-----------------------IGNLSK 197

Query: 218 LSMLSMRDNKIRE-LPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELV 275
           LS+LS+  N++   +P  +G L N+ +L L  N L   +P  IGN + L  L +  NEL 
Sbjct: 198 LSVLSIYSNELTGPIPTSIGNLVNMDSLLLYENKLSGSIPFTIGNLSKLSGLYISLNELT 257

Query: 276 N-IPDMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
             IP  +GNL+NL  +RL  N+L  S+P  +     L++ ++    L+      + +L +
Sbjct: 258 GPIPASIGNLVNLEAMRLFKNKLSGSIPFNIGNLSKLSKLSIHSNELTGPIPASIGNLVN 317

Query: 334 INNITLSRNKFTA---YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           ++++ L +NK +    +  G  ++F SV SI+F       IP  I     +L  + +++N
Sbjct: 318 LDSMILHKNKLSGSIPFIIGNLSKF-SVLSISFNE-LTGPIPASI-GNLVHLDSLLLEEN 374

Query: 391 LLT-SLPLDLGTWVGLTELNLGTNQISK-LSEDIQNLVNLEVL-VLSNNLLKKLPSSIGN 447
            L+ S+P  +G    L+ L +  N+++  +   I NLVNLE + +  N L   +P +IGN
Sbjct: 375 KLSGSIPFTIGNLSKLSGLYISLNELTGPIPASIGNLVNLEAMRLFKNKLSGSIPFTIGN 434

Query: 448 LRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGEN 505
           L KL  L +  N+L   +P  IG L  L  L+L+ N+L  S+P  IG+L+ LS LS+  N
Sbjct: 435 LSKLSKLSIHSNELTGPIPASIGNLVHLDSLLLEENKLSGSIPFTIGNLSKLSVLSISLN 494

Query: 506 NLQ-SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL-DNCPLSQIPSEIVV 563
            L  SIP  IG L N+  L+   N     IP E+++ + L+ + L DN  +  +P  I +
Sbjct: 495 ELTGSIPSTIGNLSNVRELFFIGNELGGKIPIEMSMLTALESLQLADNNFIGHLPQNICI 554

Query: 564 GG 565
           GG
Sbjct: 555 GG 556



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 239/503 (47%), Gaps = 41/503 (8%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
           +P S+  L +L+ + L+ NKL  S+P  IG ++  + L ++ N LT  +P S+ NL  L 
Sbjct: 308 IPASIGNLVNLDSMILHKNKLSGSIPFIIGNLSKFSVLSISFNELTGPIPASIGNLVHLD 367

Query: 174 VLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSMLSMRDNKIR-E 230
            L L  NKL+  +P  +  L+ L  LY+  N +    P  I  L NL  + +  NK+   
Sbjct: 368 SLLLEENKLSGSIPFTIGNLSKLSGLYISLNELTGPIPASIGNLVNLEAMRLFKNKLSGS 427

Query: 231 LPPELGELKNLVTLDLAHNHLEE-LPKEIGNCTMLVTLDLQHNELV-NIPDMLGNLINLT 288
           +P  +G L  L  L +  N L   +P  IGN   L +L L+ N+L  +IP  +GNL  L+
Sbjct: 428 IPFTIGNLSKLSKLSIHSNELTGPIPASIGNLVHLDSLLLEENKLSGSIPFTIGNLSKLS 487

Query: 289 RLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            L +S N L  S+P T+    ++ E    G  L       +S LT++ ++ L+ N F  +
Sbjct: 488 VLSISLNELTGSIPSTIGNLSNVRELFFIGNELGGKIPIEMSMLTALESLQLADNNFIGH 547

Query: 348 -------------PSGGPTQF-----------TSVYSINFEHNQIDKIPYGIFSRAKNLS 383
                         + G   F           +S+  +  + NQ+       F    NL 
Sbjct: 548 LPQNICIGGTLKNFTAGDNNFIGPIPVSLKNCSSLIRVRLQRNQLTGDITDAFGVLPNLD 607

Query: 384 KVNMKDN-LLTSLPLDLGTWVGLTELNLGTNQISK-LSEDIQNLVNLEVLVLS-NNLLKK 440
            + + DN     L  + G +  LT L +  N +S  +  ++     L+ L LS N+L   
Sbjct: 608 YIELSDNNFYGQLSPNWGKFRSLTSLRISNNNLSGVIPPELAGATKLQRLQLSSNHLTGN 667

Query: 441 LPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQLVSL-PRAIGHLTNLS 498
           +P  + NL  L  L L+ N L   +P EI  +++LQ L L SN+L  L P+ +G+L NL 
Sbjct: 668 IPHDLCNL-PLFDLSLDNNNLTGNVPKEIASMQKLQILKLGSNKLSGLIPKQLGNLLNLW 726

Query: 499 YLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
            +S+ +NN Q  IP E+G L++L +L L  N+    IP       +L+ ++L +  LS  
Sbjct: 727 NMSLSQNNFQGNIPSELGKLKSLTSLDLGGNSLRGTIPSMFGELKSLETLNLSHNNLSGN 786

Query: 558 PSEI--VVGGPSLIIRYLKMQGP 578
            S    +    S+ I Y + +GP
Sbjct: 787 LSSFDDMTSLTSIDISYNQFEGP 809



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 229/506 (45%), Gaps = 62/506 (12%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
           +P S+  L +LE + L+ NKL  S+P  IG ++ L+ L +  N LT  +P S+ NL  L 
Sbjct: 260 IPASIGNLVNLEAMRLFKNKLSGSIPFNIGNLSKLSKLSIHSNELTGPIPASIGNLVNLD 319

Query: 174 VLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSMLSMRDNKIR-E 230
            + L  NKL+  +P ++  L+   +L + FN +    P  I  L +L  L + +NK+   
Sbjct: 320 SMILHKNKLSGSIPFIIGNLSKFSVLSISFNELTGPIPASIGNLVHLDSLLLEENKLSGS 379

Query: 231 LPPELGELKNLVTLDLAHNHLEE-LPKEIGNCTMLVTLDLQHNELV-NIPDMLGNLINLT 288
           +P  +G L  L  L ++ N L   +P  IGN   L  + L  N+L  +IP  +GNL  L+
Sbjct: 380 IPFTIGNLSKLSGLYISLNELTGPIPASIGNLVNLEAMRLFKNKLSGSIPFTIGNLSKLS 439

Query: 289 RLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA- 346
           +L +  N L   +P ++   VHL+   +E   LS      + +L+ ++ +++S N+ T  
Sbjct: 440 KLSIHSNELTGPIPASIGNLVHLDSLLLEENKLSGSIPFTIGNLSKLSVLSISLNELTGS 499

Query: 347 YPS------------------GGP-----TQFTSVYSINF-EHNQIDKIPYGIFSRAKNL 382
            PS                  GG      +  T++ S+   ++N I  +P  I       
Sbjct: 500 IPSTIGNLSNVRELFFIGNELGGKIPIEMSMLTALESLQLADNNFIGHLPQNICIGGTLK 559

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK-LSEDIQNLVNLEVLVLS-NNLLKK 440
           +     +N +  +P+ L     L  + L  NQ++  +++    L NL+ + LS NN   +
Sbjct: 560 NFTAGDNNFIGPIPVSLKNCSSLIRVRLQRNQLTGDITDAFGVLPNLDYIELSDNNFYGQ 619

Query: 441 LPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQLVS------------- 486
           L  + G  R L  L +  N L   +P E+    +LQRL L SN L               
Sbjct: 620 LSPNWGKFRSLTSLRISNNNLSGVIPPELAGATKLQRLQLSSNHLTGNIPHDLCNLPLFD 679

Query: 487 -----------LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNI 534
                      +P+ I  +  L  L +G N L   IP+++G L NL  + L+ N    NI
Sbjct: 680 LSLDNNNLTGNVPKEIASMQKLQILKLGSNKLSGLIPKQLGNLLNLWNMSLSQNNFQGNI 739

Query: 535 PFELALCSNLQIMSLDNCPL-SQIPS 559
           P EL    +L  + L    L   IPS
Sbjct: 740 PSELGKLKSLTSLDLGGNSLRGTIPS 765



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 186/366 (50%), Gaps = 19/366 (5%)

Query: 211 DIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLD 268
           +   L N+  L+M  N +   +PP++G L  L  LDL+ N L  E+P  IGN + L  L 
Sbjct: 95  NFSLLPNILTLNMSHNSLNGTIPPQIGSLSKLARLDLSDNFLSGEIPSTIGNLSNLYYLS 154

Query: 269 LQHNELVN-IPDMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDG 326
              N L   IP  +GNL+NL  + L  N+L  S+P  +     L+  ++    L+     
Sbjct: 155 FYDNSLSGAIPSSIGNLVNLDSMILHKNKLSGSIPFIIGNLSKLSVLSIYSNELTGPIPT 214

Query: 327 LLSSLTSINNITLSRNKFTA---YPSGGPTQFTSVY-SINFEHNQIDKIPYGIFSRAKNL 382
            + +L +++++ L  NK +    +  G  ++ + +Y S+N        IP  I     NL
Sbjct: 215 SIGNLVNMDSLLLYENKLSGSIPFTIGNLSKLSGLYISLN---ELTGPIPASI-GNLVNL 270

Query: 383 SKVNM-KDNLLTSLPLDLGTWVGLTELNLGTNQISK-LSEDIQNLVNLEVLVL-SNNLLK 439
             + + K+ L  S+P ++G    L++L++ +N+++  +   I NLVNL+ ++L  N L  
Sbjct: 271 EAMRLFKNKLSGSIPFNIGNLSKLSKLSIHSNELTGPIPASIGNLVNLDSMILHKNKLSG 330

Query: 440 KLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQLV-SLPRAIGHLTNL 497
            +P  IGNL K   L +  N+L   +P  IG L  L  L+L+ N+L  S+P  IG+L+ L
Sbjct: 331 SIPFIIGNLSKFSVLSISFNELTGPIPASIGNLVHLDSLLLEENKLSGSIPFTIGNLSKL 390

Query: 498 SYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ 556
           S L +  N L   IP  IG L NL  + L  N    +IPF +   S L  +S+ +  L+ 
Sbjct: 391 SGLYISLNELTGPIPASIGNLVNLEAMRLFKNKLSGSIPFTIGNLSKLSKLSIHSNELTG 450

Query: 557 -IPSEI 561
            IP+ I
Sbjct: 451 PIPASI 456



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 111/216 (51%), Gaps = 8/216 (3%)

Query: 354 QFTSVYSINFEHNQIDKIPYGI-FSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLG 411
           +F SV +IN  +  +      + FS   N+  +NM  N L  ++P  +G+   L  L+L 
Sbjct: 73  EFNSVSNINLTNVGLRGTLQNLNFSLLPNILTLNMSHNSLNGTIPPQIGSLSKLARLDLS 132

Query: 412 TNQIS-KLSEDIQNLVNLEVLVL-SNNLLKKLPSSIGNLRKLKCLDLEENKLE-SLPNEI 468
            N +S ++   I NL NL  L    N+L   +PSSIGNL  L  + L +NKL  S+P  I
Sbjct: 133 DNFLSGEIPSTIGNLSNLYYLSFYDNSLSGAIPSSIGNLVNLDSMILHKNKLSGSIPFII 192

Query: 469 GFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTLENLHTLYLN 526
           G L +L  L + SN+L   +P +IG+L N+  L + EN L  SIP  IG L  L  LY++
Sbjct: 193 GNLSKLSVLSIYSNELTGPIPTSIGNLVNMDSLLLYENKLSGSIPFTIGNLSKLSGLYIS 252

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLS-QIPSEI 561
            N     IP  +    NL+ M L    LS  IP  I
Sbjct: 253 LNELTGPIPASIGNLVNLEAMRLFKNKLSGSIPFNI 288



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 153/331 (46%), Gaps = 13/331 (3%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTS-LPDSL---ANLQ 170
           +P ++  L+++ EL+  GN+L   +P ++  +T L  L LA+N+    LP ++     L+
Sbjct: 500 IPSTIGNLSNVRELFFIGNELGGKIPIEMSMLTALESLQLADNNFIGHLPQNICIGGTLK 559

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKI- 228
                D  +N +  +P+ +   +SL  + L+ N++     D    L NL  + + DN   
Sbjct: 560 NFTAGD--NNFIGPIPVSLKNCSSLIRVRLQRNQLTGDITDAFGVLPNLDYIELSDNNFY 617

Query: 229 RELPPELGELKNLVTLDLAHNHLEE-LPKEIGNCTMLVTLDLQHNELV-NIPDMLGNLIN 286
            +L P  G+ ++L +L +++N+L   +P E+   T L  L L  N L  NIP  L NL  
Sbjct: 618 GQLSPNWGKFRSLTSLRISNNNLSGVIPPELAGATKLQRLQLSSNHLTGNIPHDLCNL-P 676

Query: 287 LTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           L  L L  N L   VP+ ++    L    +    LS L    L +L ++ N++LS+N F 
Sbjct: 677 LFDLSLDNNNLTGNVPKEIASMQKLQILKLGSNKLSGLIPKQLGNLLNLWNMSLSQNNFQ 736

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                   +  S+ S++   N +      +F   K+L  +N+  N L+           L
Sbjct: 737 GNIPSELGKLKSLTSLDLGGNSLRGTIPSMFGELKSLETLNLSHNNLSGNLSSFDDMTSL 796

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
           T +++  NQ      +I    N ++  L NN
Sbjct: 797 TSIDISYNQFEGPLPNILAFHNAKIEALRNN 827



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 75/130 (57%), Gaps = 6/130 (4%)

Query: 454 LDLEENKLE-SLPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQ-SI 510
           L++  N L  ++P +IG L +L RL L  N L   +P  IG+L+NL YLS  +N+L  +I
Sbjct: 105 LNMSHNSLNGTIPPQIGSLSKLARLDLSDNFLSGEIPSTIGNLSNLYYLSFYDNSLSGAI 164

Query: 511 PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ-IPSEI--VVGGPS 567
           P  IG L NL ++ L+ N    +IPF +   S L ++S+ +  L+  IP+ I  +V   S
Sbjct: 165 PSSIGNLVNLDSMILHKNKLSGSIPFIIGNLSKLSVLSIYSNELTGPIPTSIGNLVNMDS 224

Query: 568 LIIRYLKMQG 577
           L++   K+ G
Sbjct: 225 LLLYENKLSG 234



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 3/140 (2%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTN 148
           N+ KE    ++  IL L  +K S   +P  +  L +L  + L  N    ++PS++G + +
Sbjct: 690 NVPKEIASMQKLQILKLGSNKLS-GLIPKQLGNLLNLWNMSLSQNNFQGNIPSELGKLKS 748

Query: 149 LTCLGLAENSL-TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
           LT L L  NSL  ++P     L+ L  L+L HN L+        +TSL  + + +N+ + 
Sbjct: 749 LTSLDLGGNSLRGTIPSMFGELKSLETLNLSHNNLSGNLSSFDDMTSLTSIDISYNQFEG 808

Query: 208 VHPDIQYLSNLSMLSMRDNK 227
             P+I    N  + ++R+NK
Sbjct: 809 PLPNILAFHNAKIEALRNNK 828


>gi|418701530|ref|ZP_13262455.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759612|gb|EKR25824.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 423

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 129/358 (36%), Positives = 192/358 (53%), Gaps = 4/358 (1%)

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L L F  +KT+   I  L NL  L +  N+   L  E+ +LK+L  L+L +N L  LPKE
Sbjct: 46  LDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKE 105

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           IG    L  L L  NELVN+P  +G   NL +L L  N+L  +P+ + +  +L E ++  
Sbjct: 106 IGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLS 165

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             L SLP  +   L S+ N+ L+ N+FT   S       ++ +++   N++  IP  I  
Sbjct: 166 NKLISLPTEI-EQLKSLKNLDLNNNEFTTV-SKEVMLLETLENLDLRSNKLKTIPKEI-R 222

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           + K+L  + +  N LTSLP ++     L  LNLG N+      +I  L NL  L L  N 
Sbjct: 223 QLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQ 282

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L + P  +G L+ LK L L  N++ +LP E+  L +LQ L L  N++  LP+ I  L NL
Sbjct: 283 LVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNL 342

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            +LS+  N L ++P+EIG L+ L  L L +N  L  +P E+    NLQ + LD+ P+S
Sbjct: 343 EWLSLSNNKLNALPKEIGQLKKLQRLELGNNQ-LTTLPKEIEQLKNLQRLELDSNPIS 399



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 189/370 (51%), Gaps = 26/370 (7%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L +L ++IG + NL  L L  N  T L   +  L+ L+ L+L +NKL  LP  + +L +L
Sbjct: 53  LKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           + L L  N +  +  +I    NL  L++ +NK+  LP E+G+L+NL  L L  N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
            EI     L  LDL +NE   +   +  L  L  L L  N+L+++P+ + +   L    +
Sbjct: 173 TEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
            G  L+SLP  +   L ++  + L  N+F  +P         +    + +NQ+ + P  +
Sbjct: 233 TGNQLTSLPKEI-EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY-YNQLVEFPKEV 290

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             + K+L  +++  N +T+LP+++     L EL+L  N+I+ L ++I  L NLE L LSN
Sbjct: 291 -GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSN 349

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N                       KL +LP EIG LK+LQRL L +NQL +LP+ I  L 
Sbjct: 350 N-----------------------KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK 386

Query: 496 NLSYLSVGEN 505
           NL  L +  N
Sbjct: 387 NLQRLELDSN 396



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 187/360 (51%), Gaps = 8/360 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  +  T L   + +L  L++L L  NKL  LP +IG + NL  L L  N L 
Sbjct: 64  KNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELV 123

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +   + L+ L+L +NKL  LP  + +L +L+ L L  N++ ++  +I+ L +L  
Sbjct: 124 NLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKN 183

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N+   +  E+  L+ L  LDL  N L+ +PKEI     L  L L  N+L ++P  
Sbjct: 184 LDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKE 243

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L L  NR +  P  + +  +L E N+    L   P   +  L S+  ++L 
Sbjct: 244 IEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKE-VGQLKSLKYLSLY 302

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+ T  P    TQ   +  ++   N+I  +P  I  + KNL  +++ +N L +LP ++G
Sbjct: 303 HNQITTLPV-EVTQLPDLQELHLSGNKITILPKEIL-QLKNLEWLSLSNNKLNALPKEIG 360

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL--KC-LDLE 457
               L  L LG NQ++ L ++I+ L NL+ L L +N +   P     +RKL  KC +D E
Sbjct: 361 QLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKLLPKCEIDFE 418



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 174/334 (52%), Gaps = 27/334 (8%)

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           ++ L  ++G+LKNL  LDL  N    L KEI     L  L+L +N+L  +P  +G L NL
Sbjct: 53  LKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L L  N L ++P+ + +  +L + N++   L+ LP  +   L ++  ++L  NK  + 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEI-GQLQNLQELSLLSNKLISL 171

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
           P+                            + K+L  +++ +N  T++  ++     L  
Sbjct: 172 PTE-------------------------IEQLKSLKNLDLNNNEFTTVSKEVMLLETLEN 206

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           L+L +N++  + ++I+ L +L+VL+L+ N L  LP  I  L+ LK L+L EN+ +  P E
Sbjct: 207 LDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVE 266

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
           I  LK L  L L  NQLV  P+ +G L +L YLS+  N + ++P E+  L +L  L+L+ 
Sbjct: 267 ILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSG 326

Query: 528 NTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N  +  +P E+    NL+ +SL N  L+ +P EI
Sbjct: 327 NK-ITILPKEILQLKNLEWLSLSNNKLNALPKEI 359



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 147/261 (56%), Gaps = 3/261 (1%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           +N+ KE  + K  N+  L+L  + +T LP  + +L +L+EL L  NKL SLP++I  + +
Sbjct: 123 VNLPKEIGQFK--NLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKS 180

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L L  N  T++   +  L+ L  LDLR NKL  +P  + +L SLK+L L  N++ ++
Sbjct: 181 LKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSL 240

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
             +I+ L NL  L++ +N+ +  P E+ ELKNL+ L+L +N L E PKE+G    L  L 
Sbjct: 241 PKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLS 300

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
           L HN++  +P  +  L +L  L LS N++  +P+ + +  +L   ++    L++LP   +
Sbjct: 301 LYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKE-I 359

Query: 329 SSLTSINNITLSRNKFTAYPS 349
             L  +  + L  N+ T  P 
Sbjct: 360 GQLKKLQRLELGNNQLTTLPK 380



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 120/243 (49%), Gaps = 32/243 (13%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           NLDL+ +  T +   V  L  LE L L  NKL ++P +I  + +L  L L  N LTSLP 
Sbjct: 183 NLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPK 242

Query: 165 SLANLQQLRVLDL-----------------------RHNKLNELPMVVYKLTSLKILYLR 201
            +  LQ L+ L+L                        +N+L E P  V +L SLK L L 
Sbjct: 243 EIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLY 302

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N+I T+  ++  L +L  L +  NKI  LP E+ +LKNL  L L++N L  LPKEIG  
Sbjct: 303 HNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL-----ESVPETLSKCVHLNEFNVE 316
             L  L+L +N+L  +P  +  L NL RL L  N +     E + + L KC    E + E
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISPKEKERIRKLLPKC----EIDFE 418

Query: 317 GCA 319
           G  
Sbjct: 419 GGG 421



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 155/310 (50%), Gaps = 27/310 (8%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           N+   L N  ++  L LS+  L+++   + +  +L + ++ G   + L   +   L  + 
Sbjct: 32  NLEKALLNPADVRNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQ-LKDLQ 90

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + L+ NK T  P     Q  ++  ++   N++  +P  I  + KNL K+N+ +N LT L
Sbjct: 91  KLNLNNNKLTVLPKE-IGQLQNLQELSLHSNELVNLPKEI-GQFKNLQKLNLDNNKLTVL 148

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++G    L EL+L +N++  L  +I+ L +L+ L L+NN    +   +  L  L+ LD
Sbjct: 149 PKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLD 208

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ------- 508
           L  NKL+++P EI  LK L+ L+L  NQL SLP+ I  L NL  L++GEN  Q       
Sbjct: 209 LRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEIL 268

Query: 509 ----------------SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
                             P+E+G L++L  L L  N  +  +P E+    +LQ + L   
Sbjct: 269 ELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ-ITTLPVEVTQLPDLQELHLSGN 327

Query: 553 PLSQIPSEIV 562
            ++ +P EI+
Sbjct: 328 KITILPKEIL 337



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           K L  ++ N   ++ LDL    L++L N+IG LK LQ+L L  N+   L + I  L +L 
Sbjct: 31  KNLEKALLNPADVRNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L++  N L  +P+EIG L+NL  L L+ N  + N+P E+    NLQ ++LDN  L+ +P
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELV-NLPKEIGQFKNLQKLNLDNNKLTVLP 149

Query: 559 SEI 561
            EI
Sbjct: 150 KEI 152


>gi|444724187|gb|ELW64799.1| Leucine-rich repeat and IQ domain-containing protein 4 [Tupaia
           chinensis]
          Length = 561

 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 211/422 (50%), Gaps = 14/422 (3%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYL-YGNKLASLPSQIGYVTNLTCLGLAENSL 159
           +N+  L L+K+++T L P +  L+ LE L L Y   L S P  I  +  L  L L +  L
Sbjct: 72  KNLQVLYLNKNNLTGLCPELGALSSLEGLDLSYNPFLPSFPHVISSLRALRELRLYQTDL 131

Query: 160 TSLPDSLA-NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
             LP  +  NL  L +L L  N L  LP  V   T L+ +YL+ N ++    ++  L NL
Sbjct: 132 RELPVGICKNLHHLELLGLARNHLKSLPKEVVNQTKLREIYLKQNELEVFPQELCVLCNL 191

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            ++ + +N+I  +P E+G L  L  L  AHN L  LP+ +  C+ +  LD+ HN L  IP
Sbjct: 192 EVIDVDENRIHAIPEEIGHLTELQKLYAAHNRLPSLPESLCKCSKMAVLDVSHNLLHCIP 251

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             L  L  +T + LS NRLE VP  + +   L+   +    L +L       L S+  + 
Sbjct: 252 HSLAGLTQMTEIGLSGNRLEKVPRLVCRWA-LHLLYLRDTGLWALRRS-FKRLGSLRFLD 309

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINF---EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
           LS+N         P Q  ++ ++ F   + N+I ++    F     L  + +  N  +  
Sbjct: 310 LSQNHL----DHCPVQICALKNLEFLALDDNKIGQVLPSEFGSLSKLKILGLTGNEFSYF 365

Query: 396 PLDLGTWVGLTELNLGTNQISKLS---EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
           P ++ +   L +L +G +Q SKL+   E I  L +L  L + NN L+ LP ++G++  L+
Sbjct: 366 PEEIFSLESLEKLYIGQDQGSKLTCVPEHIVKLQSLRELYIENNHLEYLPDALGSMPNLE 425

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
            LD   N L+ LP+ I   + L+ L+L+ N L  LP  + HL +L  L++  N ++  P 
Sbjct: 426 VLDCRHNLLKQLPDAIIQAQALKELLLEDNLLTHLPEDLDHLVSLRVLTLRNNPMEEPPI 485

Query: 513 EI 514
           E+
Sbjct: 486 EV 487



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 190/449 (42%), Gaps = 84/449 (18%)

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD----------------- 245
           N+I+ +  DIQ L NL +L +  N +  L PELG L +L  LD                 
Sbjct: 59  NQIEEIPQDIQRLKNLQVLYLNKNNLTGLCPELGALSSLEGLDLSYNPFLPSFPHVISSL 118

Query: 246 -------------------------------LAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
                                          LA NHL+ LPKE+ N T L  + L+ NEL
Sbjct: 119 RALRELRLYQTDLRELPVGICKNLHHLELLGLARNHLKSLPKEVVNQTKLREIYLKQNEL 178

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
              P  L  L NL  + +  NR+ ++PE +     L +       L SLP+  L   + +
Sbjct: 179 EVFPQELCVLCNLEVIDVDENRIHAIPEEIGHLTELQKLYAAHNRLPSLPES-LCKCSKM 237

Query: 335 NNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
             + +S N     P    G TQ T    I    N+++K+P  +   A +L  + ++D  L
Sbjct: 238 AVLDVSHNLLHCIPHSLAGLTQMT---EIGLSGNRLEKVPRLVCRWALHL--LYLRDTGL 292

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK-LPSSIGNLRKL 451
            +L         L  L+L  N +      I  L NLE L L +N + + LPS  G+L KL
Sbjct: 293 WALRRSFKRLGSLRFLDLSQNHLDHCPVQICALKNLEFLALDDNKIGQVLPSEFGSLSKL 352

Query: 452 KCLDLEENKLESLPNEIGFLKELQR--------------------------LILQSNQLV 485
           K L L  N+    P EI  L+ L++                          L +++N L 
Sbjct: 353 KILGLTGNEFSYFPEEIFSLESLEKLYIGQDQGSKLTCVPEHIVKLQSLRELYIENNHLE 412

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
            LP A+G + NL  L    N L+ +P+ I   + L  L L DN  L ++P +L    +L+
Sbjct: 413 YLPDALGSMPNLEVLDCRHNLLKQLPDAIIQAQALKELLLEDNL-LTHLPEDLDHLVSLR 471

Query: 546 IMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
           +++L N P+ + P E+   G   I  YLK
Sbjct: 472 VLTLRNNPMEEPPIEVCAEGNEAIWNYLK 500



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 125/255 (49%), Gaps = 6/255 (2%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           CK   +  LD+S + +  +P S+  LT + E+ L GN+L  +P  +     L  L L + 
Sbjct: 232 CKCSKMAVLDVSHNLLHCIPHSLAGLTQMTEIGLSGNRLEKVPRLVCRWA-LHLLYLRDT 290

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLS 216
            L +L  S   L  LR LDL  N L+  P+ +  L +L+ L L  N+I  V P +   LS
Sbjct: 291 GLWALRRSFKRLGSLRFLDLSQNHLDHCPVQICALKNLEFLALDDNKIGQVLPSEFGSLS 350

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL---PKEIGNCTMLVTLDLQHNE 273
            L +L +  N+    P E+  L++L  L +  +   +L   P+ I     L  L +++N 
Sbjct: 351 KLKILGLTGNEFSYFPEEIFSLESLEKLYIGQDQGSKLTCVPEHIVKLQSLRELYIENNH 410

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L  +PD LG++ NL  L   +N L+ +P+ + +   L E  +E   L+ LP+  L  L S
Sbjct: 411 LEYLPDALGSMPNLEVLDCRHNLLKQLPDAIIQAQALKELLLEDNLLTHLPED-LDHLVS 469

Query: 334 INNITLSRNKFTAYP 348
           +  +TL  N     P
Sbjct: 470 LRVLTLRNNPMEEPP 484



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 56/122 (45%), Gaps = 24/122 (19%)

Query: 111 SSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLG----------------- 153
           S +T +P  + KL  L ELY+  N L  LP  +G + NL  L                  
Sbjct: 386 SKLTCVPEHIVKLQSLRELYIENNHLEYLPDALGSMPNLEVLDCRHNLLKQLPDAIIQAQ 445

Query: 154 ------LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL-YLRFNRIK 206
                 L +N LT LP+ L +L  LRVL LR+N + E P+ V    +  I  YL+ NR K
Sbjct: 446 ALKELLLEDNLLTHLPEDLDHLVSLRVLTLRNNPMEEPPIEVCAEGNEAIWNYLKENRNK 505

Query: 207 TV 208
            +
Sbjct: 506 KI 507


>gi|417761946|ref|ZP_12409943.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409942208|gb|EKN87828.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
          Length = 305

 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 115/303 (37%), Positives = 164/303 (54%), Gaps = 26/303 (8%)

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           M  N++  LP E+G+L+NL  LDL  N L  LP EIG    L TL L  N+L  +P   G
Sbjct: 1   MSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESG 60

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L NL  L LS N+L ++P+ + +  +L   N++   L++L   +               
Sbjct: 61  KLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI--------------- 105

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
                      Q  ++ ++N   NQ+  +P  I  + +NL  +N+ DN LT+LP+++G  
Sbjct: 106 ----------EQLKNLQTLNLSDNQLTTLPIEI-GKLQNLHTLNLSDNQLTTLPIEIGKL 154

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
             L  LNL  NQ++ LS +I  L NL+ L L +N L  L   I  L+ L+ L L  N+L 
Sbjct: 155 QNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLV 214

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
            LP EIG L+ LQ L L +NQL +LP  IG L NL  LS+ +N L + P+EIG L+NL T
Sbjct: 215 ILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQT 274

Query: 523 LYL 525
           LYL
Sbjct: 275 LYL 277



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 111/304 (36%), Positives = 156/304 (51%), Gaps = 27/304 (8%)

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           ++ N L  LPKEIG    L  LDL  N L  +P  +G L NL  L LS N+L ++P    
Sbjct: 1   MSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESG 60

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
           K  +L E N+    L++LP  +                          Q  ++ ++N + 
Sbjct: 61  KLENLQELNLSDNQLTTLPQEI-------------------------GQLQNLQTLNLKS 95

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           NQ+  + +    + KNL  +N+ DN LT+LP+++G    L  LNL  NQ++ L  +I  L
Sbjct: 96  NQLTTL-FKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKL 154

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
            NL  L LS N L  L   IG L+ L+ L+L  N+L +L  EI  LK LQ L L  N+LV
Sbjct: 155 QNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLV 214

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
            LP+ IG L NL  L++  N L ++P EIG L+NL TL L  N  +   P E+    NLQ
Sbjct: 215 ILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLM-TFPKEIGQLKNLQ 273

Query: 546 IMSL 549
            + L
Sbjct: 274 TLYL 277



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/272 (35%), Positives = 153/272 (56%), Gaps = 14/272 (5%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  LDL  + +T LP  + KL +L+ LYL  N+L +LP + G + NL  L L++N 
Sbjct: 15  KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQ 74

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP  +  LQ L+ L+L+ N+L  L   + +L +L+ L L  N++ T+  +I  L NL
Sbjct: 75  LTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNL 134

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++ DN++  LP E+G+L+NL TL+L+ N L  L  EIG    L  L+L  N+L  + 
Sbjct: 135 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLS 194

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +  L NL  L LSYNRL  +P+ + +  +L E N+    L++LP   +  L ++  ++
Sbjct: 195 KEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE-IGQLQNLQTLS 253

Query: 339 LSRNKFTAYPS-------------GGPTQFTS 357
           L +N+   +P              GG  QF+S
Sbjct: 254 LYKNRLMTFPKEIGQLKNLQTLYLGGHNQFSS 285



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/196 (40%), Positives = 118/196 (60%), Gaps = 2/196 (1%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           NQ+  +P  I  + +NL ++++ DN LT LP+++G    L  L L +NQ++ L  +   L
Sbjct: 4   NQLTILPKEI-GKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKL 62

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
            NL+ L LS+N L  LP  IG L+ L+ L+L+ N+L +L  EI  LK LQ L L  NQL 
Sbjct: 63  ENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLT 122

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
           +LP  IG L NL  L++ +N L ++P EIG L+NLHTL L+ N  L  +  E+    NLQ
Sbjct: 123 TLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQ-LTTLSIEIGKLQNLQ 181

Query: 546 IMSLDNCPLSQIPSEI 561
            ++L +  L+ +  EI
Sbjct: 182 DLNLHSNQLTTLSKEI 197


>gi|410901320|ref|XP_003964144.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Takifugu
           rubripes]
          Length = 524

 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 197/394 (50%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + + V+D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I
Sbjct: 12  RHVEVVDKRHCSLLYVPDEIYRYERSLEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEI 71

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LPPE+     LV LD++ N + E+P+ I  CT L   D   N L  +P+    L NLT
Sbjct: 72  QRLPPEIANFVQLVELDVSRNDIMEIPESISYCTALQVADFSGNPLTRLPETFPELRNLT 131

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L ++   L+ +PE +    +L    +    L+ LP+ L S L  +  + L  N+  + P
Sbjct: 132 CLSINDISLQVLPENIGNLTNLVSLELRENLLTFLPESL-SMLHRLEELDLGNNELYSLP 190

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                               D I + +      L  + +  N L  +P ++G+   L  +
Sbjct: 191 --------------------DSIGHLV-----GLKDLWLDGNQLNEIPAEMGSMKSLLCV 225

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N+I +L E++  L++L  L++S NL+  LP SIG L+KL  L  ++N+L  LP  I
Sbjct: 226 DVSENKIQRLPEELGGLLSLADLLVSQNLIDALPESIGKLKKLSILKADQNRLTYLPESI 285

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + L  L+L  N++ SLPR+IG L  LS  +   N L S+P+EIG  + L+   + +N
Sbjct: 286 GNCESLTELVLTENRIQSLPRSIGKLKRLSNFNCDRNQLTSLPKEIGGCQALNVFCVREN 345

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  IP EL+  + L ++ +    L  +P  ++
Sbjct: 346 R-LMRIPSELSQATELHVLDVSGNRLPNLPISLI 378



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 130/426 (30%), Positives = 199/426 (46%), Gaps = 55/426 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LGL++N +  LP 
Sbjct: 17  VDKRHCSLLYVPDEIYRYERSLEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQRLPP 76

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            +AN  QL  LD+  N + E+P  +   T+L++     N +  +      L NL+ LS+ 
Sbjct: 77  EIANFVQLVELDVSRNDIMEIPESISYCTALQVADFSGNPLTRLPETFPELRNLTCLSIN 136

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           D  ++ LP  +G L NLV+L+L  N L  LP+ +     L  LDL +NEL ++PD +G+L
Sbjct: 137 DISLQVLPENIGNLTNLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPDSIGHL 196

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
           + L  L L  N+L  +P                          + S+ S+  + +S NK 
Sbjct: 197 VGLKDLWLDGNQLNEIPAE------------------------MGSMKSLLCVDVSENKI 232

Query: 345 TAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
              P   GG     S+  +    N ID +P  I  + K LS +    N LT LP  +G  
Sbjct: 233 QRLPEELGG---LLSLADLLVSQNLIDALPESI-GKLKKLSILKADQNRLTYLPESIGNC 288

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
             LTE                       LVL+ N ++ LP SIG L++L   + + N+L 
Sbjct: 289 ESLTE-----------------------LVLTENRIQSLPRSIGKLKRLSNFNCDRNQLT 325

Query: 463 SLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
           SLP EIG  + L    ++ N+L+ +P  +   T L  L V  N L ++P  + TL  L  
Sbjct: 326 SLPKEIGGCQALNVFCVRENRLMRIPSELSQATELHVLDVSGNRLPNLPISLITLR-LKA 384

Query: 523 LYLNDN 528
           L+L+ N
Sbjct: 385 LWLSVN 390



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 166/313 (53%), Gaps = 6/313 (1%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+   T L+     GN L  LP     + NLTCL + + SL  L
Sbjct: 84  LVELDVSRNDIMEIPESISYCTALQVADFSGNPLTRLPETFPELRNLTCLSINDISLQVL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  +  L  L+ L L  N + ++   I +L  L  L 
Sbjct: 144 PENIGNLTNLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPDSIGHLVGLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ E+P E+G +K+L+ +D++ N ++ LP+E+G    L  L +  N +  +P+ +G
Sbjct: 204 LDGNQLNEIPAEMGSMKSLLCVDVSENKIQRLPEELGGLLSLADLLVSQNLIDALPESIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L+   NRL  +PE++  C  L E  +    + SLP   +  L  ++N    RN
Sbjct: 264 KLKKLSILKADQNRLTYLPESIGNCESLTELVLTENRIQSLPRS-IGKLKRLSNFNCDRN 322

Query: 343 KFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           + T+ P   G  Q  +V+ +    N++ +IP  + S+A  L  +++  N L +LP+ L T
Sbjct: 323 QLTSLPKEIGGCQALNVFCV--RENRLMRIPSEL-SQATELHVLDVSGNRLPNLPISLIT 379

Query: 402 WVGLTELNLGTNQ 414
            + L  L L  NQ
Sbjct: 380 -LRLKALWLSVNQ 391



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 156/289 (53%), Gaps = 4/289 (1%)

Query: 107 DLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSL 166
           D S + +T LP +  +L +L  L +    L  LP  IG +TNL  L L EN LT LP+SL
Sbjct: 111 DFSGNPLTRLPETFPELRNLTCLSINDISLQVLPENIGNLTNLVSLELRENLLTFLPESL 170

Query: 167 ANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDN 226
           + L +L  LDL +N+L  LP  +  L  LK L+L  N++  +  ++  + +L  + + +N
Sbjct: 171 SMLHRLEELDLGNNELYSLPDSIGHLVGLKDLWLDGNQLNEIPAEMGSMKSLLCVDVSEN 230

Query: 227 KIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           KI+ LP ELG L +L  L ++ N ++ LP+ IG    L  L    N L  +P+ +GN  +
Sbjct: 231 KIQRLPEELGGLLSLADLLVSQNLIDALPESIGKLKKLSILKADQNRLTYLPESIGNCES 290

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           LT L L+ NR++S+P ++ K   L+ FN +   L+SLP   +    ++N   +  N+   
Sbjct: 291 LTELVLTENRIQSLPRSIGKLKRLSNFNCDRNQLTSLPKE-IGGCQALNVFCVRENRLMR 349

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFS-RAKNLS-KVNMKDNLLT 393
            PS   +Q T ++ ++   N++  +P  + + R K L   VN    LLT
Sbjct: 350 IPS-ELSQATELHVLDVSGNRLPNLPISLITLRLKALWLSVNQSQPLLT 397



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 167/359 (46%), Gaps = 27/359 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + I  LPP +     L EL +  N +  +P  I Y T L     + N LT LP++
Sbjct: 64  LGLSDNEIQRLPPEIANFVQLVELDVSRNDIMEIPESISYCTALQVADFSGNPLTRLPET 123

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
              L+ L  L +    L  LP  +  LT+L  L LR N +  +   +  L  L  L + +
Sbjct: 124 FPELRNLTCLSINDISLQVLPENIGNLTNLVSLELRENLLTFLPESLSMLHRLEELDLGN 183

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP  +G L  L  L L  N L E+P E+G+   L+ +D+  N++  +P+ LG L+
Sbjct: 184 NELYSLPDSIGHLVGLKDLWLDGNQLNEIPAEMGSMKSLLCVDVSENKIQRLPEELGGLL 243

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L  L +S N ++++PE++ K   L+    +   L+ LP+  + +  S+  + L+ N+  
Sbjct: 244 SLADLLVSQNLIDALPESIGKLKKLSILKADQNRLTYLPES-IGNCESLTELVLTENRIQ 302

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P                             + K LS  N   N LTSLP ++G    L
Sbjct: 303 SLPRS-------------------------IGKLKRLSNFNCDRNQLTSLPKEIGGCQAL 337

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
               +  N++ ++  ++     L VL +S N L  LP S+  LR LK L L  N+ + L
Sbjct: 338 NVFCVRENRLMRIPSELSQATELHVLDVSGNRLPNLPISLITLR-LKALWLSVNQSQPL 395



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 118/228 (51%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+++L+L ++ +T LP S+  L  LEEL L  N+L SLP  IG++  L  L L  N L  
Sbjct: 152 NLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPDSIGHLVGLKDLWLDGNQLNE 211

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  + +++ L  +D+  NK+  LP  +  L SL  L +  N I  +   I  L  LS+L
Sbjct: 212 IPAEMGSMKSLLCVDVSENKIQRLPEELGGLLSLADLLVSQNLIDALPESIGKLKKLSIL 271

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
               N++  LP  +G  ++L  L L  N ++ LP+ IG    L   +   N+L ++P  +
Sbjct: 272 KADQNRLTYLPESIGNCESLTELVLTENRIQSLPRSIGKLKRLSNFNCDRNQLTSLPKEI 331

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
           G    L    +  NRL  +P  LS+   L+  +V G  L +LP  L++
Sbjct: 332 GGCQALNVFCVRENRLMRIPSELSQATELHVLDVSGNRLPNLPISLIT 379


>gi|428166598|gb|EKX35571.1| hypothetical protein GUITHDRAFT_79708, partial [Guillardia theta
           CCMP2712]
          Length = 442

 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 206/397 (51%), Gaps = 3/397 (0%)

Query: 132 YGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYK 191
           +  +L+  P +I    NL  + L  N + +LP  + N   L +L L+ NKL+++P  + K
Sbjct: 36  HACRLSKFPEEILNFKNLKKIFLQNNYIETLPSEIGNFPNLAILYLQENKLHDVPPDLGK 95

Query: 192 LTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHL 251
           L+ L IL L  N+I+ +  D+ +  +L +LS+ +N++ ++P E+G    L +LDL  N  
Sbjct: 96  LSCLSILALHGNQIRYIPRDLGHCQSLQVLSLSNNRLTQIPLEIGRCNKLKSLDLKDNPD 155

Query: 252 EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN 311
             +P  +   T L +L + +NE+ ++P   G L++L  L  + NRL  +P++ +    L 
Sbjct: 156 IAIPPRLCKWTTLKSLSMNNNEVKSLPSKFGQLVHLVSLSFASNRLVVLPKSFAFLSRLK 215

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
             N++   L+ LP   ++ LT+I +I L+ N+    P         V S++  +N I  I
Sbjct: 216 SLNLDSNLLTFLPLE-IARLTAITSIRLTDNQVAVLPPQIRAH-KYVESLDLSYNLISSI 273

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
              + S  +NL  + +  N LT LP +LG    LT L++  N+IS        L +L VL
Sbjct: 274 APQV-SALRNLLSLRLSYNTLTLLPPELGKLRSLTNLDIVGNRISYFPNHFSALTSLRVL 332

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            +S N  K +P  + N   L+ L    NKL +L + +     L++L LQ N L SL   I
Sbjct: 333 KISRNEFKLIPDCVRNFTSLRVLSASRNKLVTLSSVLEGCILLEQLWLQENLLTSLHPMI 392

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G+L  L+ L+ G N + SIP ++G+   L  L +  N
Sbjct: 393 GNLERLNSLNFGRNAITSIPPQLGSCVALTALGIYGN 429



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 197/394 (50%), Gaps = 3/394 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  + L  + I  LP  +    +L  LYL  NKL  +P  +G ++ L+ L L  N + 
Sbjct: 51  KNLKKIFLQNNYIETLPSEIGNFPNLAILYLQENKLHDVPPDLGKLSCLSILALHGNQIR 110

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            +P  L + Q L+VL L +N+L ++P+ + +   LK L L+ N    + P +   + L  
Sbjct: 111 YIPRDLGHCQSLQVLSLSNNRLTQIPLEIGRCNKLKSLDLKDNPDIAIPPRLCKWTTLKS 170

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LSM +N+++ LP + G+L +LV+L  A N L  LPK     + L +L+L  N L  +P  
Sbjct: 171 LSMNNNEVKSLPSKFGQLVHLVSLSFASNRLVVLPKSFAFLSRLKSLNLDSNLLTFLPLE 230

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L  +T +RL+ N++  +P  +    ++   ++    +SS+    +S+L ++ ++ LS
Sbjct: 231 IARLTAITSIRLTDNQVAVLPPQIRAHKYVESLDLSYNLISSIAPQ-VSALRNLLSLRLS 289

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N  T  P     +  S+ +++   N+I   P   FS   +L  + +  N    +P  + 
Sbjct: 290 YNTLTLLPPEL-GKLRSLTNLDIVGNRISYFP-NHFSALTSLRVLKISRNEFKLIPDCVR 347

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
            +  L  L+   N++  LS  ++  + LE L L  NLL  L   IGNL +L  L+   N 
Sbjct: 348 NFTSLRVLSASRNKLVTLSSVLEGCILLEQLWLQENLLTSLHPMIGNLERLNSLNFGRNA 407

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
           + S+P ++G    L  L +  N L  LP ++  L
Sbjct: 408 ITSIPPQLGSCVALTALGIYGNGLSRLPPSLKKL 441



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 134/281 (47%), Gaps = 26/281 (9%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           I  E  RC +  + +LDL  +    +PP + K T L+ L +  N++ SLPS+ G + +L 
Sbjct: 135 IPLEIGRCNK--LKSLDLKDNPDIAIPPRLCKWTTLKSLSMNNNEVKSLPSKFGQLVHLV 192

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L  A N L  LP S A L +L+ L+L  N L  LP+ + +LT++  + L  N++  + P
Sbjct: 193 SLSFASNRLVVLPKSFAFLSRLKSLNLDSNLLTFLPLEIARLTAITSIRLTDNQVAVLPP 252

Query: 211 DIQYLSNLSMLSMRDNKIRE-----------------------LPPELGELKNLVTLDLA 247
            I+    +  L +  N I                         LPPELG+L++L  LD+ 
Sbjct: 253 QIRAHKYVESLDLSYNLISSIAPQVSALRNLLSLRLSYNTLTLLPPELGKLRSLTNLDIV 312

Query: 248 HNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKC 307
            N +   P      T L  L +  NE   IPD + N  +L  L  S N+L ++   L  C
Sbjct: 313 GNRISYFPNHFSALTSLRVLKISRNEFKLIPDCVRNFTSLRVLSASRNKLVTLSSVLEGC 372

Query: 308 VHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
           + L +  ++   L+SL   ++ +L  +N++   RN  T+ P
Sbjct: 373 ILLEQLWLQENLLTSL-HPMIGNLERLNSLNFGRNAITSIP 412



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 1/108 (0%)

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
            D    +L   P EI   K L+++ LQ+N + +LP  IG+  NL+ L + EN L  +P +
Sbjct: 33  FDAHACRLSKFPEEILNFKNLKKIFLQNNYIETLPSEIGNFPNLAILYLQENKLHDVPPD 92

Query: 514 IGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +G L  L  L L+ N  +  IP +L  C +LQ++SL N  L+QIP EI
Sbjct: 93  LGKLSCLSILALHGNQ-IRYIPRDLGHCQSLQVLSLSNNRLTQIPLEI 139



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 23/151 (15%)

Query: 112 SITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQ 171
           ++T LPP + KL  L  L + GN+++  P+    +T+L  L ++ N    +PD + N   
Sbjct: 292 TLTLLPPELGKLRSLTNLDIVGNRISYFPNHFSALTSLRVLKISRNEFKLIPDCVRNFTS 351

Query: 172 LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL------------- 218
           LRVL    NKL  L  V+     L+ L+L+ N + ++HP I  L  L             
Sbjct: 352 LRVLSASRNKLVTLSSVLEGCILLEQLWLQENLLTSLHPMIGNLERLNSLNFGRNAITSI 411

Query: 219 ----------SMLSMRDNKIRELPPELGELK 239
                     + L +  N +  LPP L +L+
Sbjct: 412 PPQLGSCVALTALGIYGNGLSRLPPSLKKLR 442


>gi|418668203|ref|ZP_13229606.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756060|gb|EKR17687.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 378

 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 185/367 (50%), Gaps = 49/367 (13%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N  ++RVLDL   +L  LP+ + +L +L+ LYL +N++                
Sbjct: 39  LTKALQNPLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTV-------------- 84

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
                    LP E+ +LKNL  L L  N L  LP EI     L  LDL  N+L  +P  +
Sbjct: 85  ---------LPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTILPQEI 135

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L L  NRL ++ + + +  +L   ++    L++LP+ +   L ++ ++ LS 
Sbjct: 136 EQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEI-EQLKNLKSLYLSE 194

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P                             + +NL  + + +N +T LP ++  
Sbjct: 195 NQFATFPKE-------------------------IGQLQNLKVLFLNNNQITILPNEIAK 229

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L L  NQ+  L ++I+ L NL+ L LS N L  LP  +G L  L+ LDL  N+L
Sbjct: 230 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 289

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
           ++LP EI  LK LQ L L +NQL  LP+ IG L NL +LS+  N L ++P EI  L+NL 
Sbjct: 290 KTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQ 349

Query: 522 TLYLNDN 528
           TLYLN+N
Sbjct: 350 TLYLNNN 356



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/331 (33%), Positives = 181/331 (54%), Gaps = 26/331 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS+  +  LP  + +L +L+ LYL+ N+L  LP +I  + NL  L L  N LT+LP+ 
Sbjct: 52  LDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE 111

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VLDL  N+L  LP  + +L +L++LYL  NR+ T+  DI+ L NL  L + +
Sbjct: 112 IEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 171

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+ +LKNL +L L+ N     PKEIG    L  L L +N++  +P+ +  L 
Sbjct: 172 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLK 231

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LS N+L ++P+ + +                        L ++  + LS N+ T
Sbjct: 232 KLQYLYLSDNQLITLPKEIEQ------------------------LKNLQTLDLSYNQLT 267

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++ +++  +NQ+  +P  I  + KNL  + + +N LT LP ++G    L
Sbjct: 268 ILPKEV-GQLENLQTLDLRNNQLKTLPKEI-EQLKNLQTLFLSNNQLTILPQEIGKLKNL 325

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
             L+L  NQ++ L  +I+ L NL+ L L+NN
Sbjct: 326 LWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 356



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 154/309 (49%), Gaps = 27/309 (8%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  LDL   EL  +P  +G L NL RL L YN+L  +P+ + +  +L  
Sbjct: 38  DLTKALQNPLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQL 97

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
             +    L++LP+ +   L ++  + L  N+ T  P                        
Sbjct: 98  LYLRSNRLTTLPNEI-EQLKNLQVLDLGSNQLTILPQE---------------------- 134

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
                + KNL  + +  N LT+L  D+     L  L+L  NQ++ L  +I+ L NL+ L 
Sbjct: 135 ---IEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 191

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           LS N     P  IG L+ LK L L  N++  LPNEI  LK+LQ L L  NQL++LP+ I 
Sbjct: 192 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIE 251

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L +  N L  +P+E+G LENL TL L +N  L  +P E+    NLQ + L N 
Sbjct: 252 QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLSNN 310

Query: 553 PLSQIPSEI 561
            L+ +P EI
Sbjct: 311 QLTILPQEI 319



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 147/246 (59%), Gaps = 1/246 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  +E+L +L+ LYL+ N+L +L   I  + NL  L L+ N LT
Sbjct: 116 KNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 175

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  L+ L+ L L  N+    P  + +L +LK+L+L  N+I  +  +I  L  L  
Sbjct: 176 TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQY 235

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN++  LP E+ +LKNL TLDL++N L  LPKE+G    L TLDL++N+L  +P  
Sbjct: 236 LYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 295

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L LS N+L  +P+ + K  +L   ++    L++LP+  +  L ++  + L+
Sbjct: 296 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNE-IEQLKNLQTLYLN 354

Query: 341 RNKFTA 346
            N+F++
Sbjct: 355 NNQFSS 360



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N  +++ LDL   +L++LP EIG LK LQRL L  NQL  LP+ I  L NL 
Sbjct: 37  RDLTKALQNPLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 96

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L +  N L ++P EI  L+NL  L L  N  L  +P E+    NLQ++ L +  L+ + 
Sbjct: 97  LLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQ-LTILPQEIEQLKNLQLLYLHSNRLTTLS 155

Query: 559 SEI 561
            +I
Sbjct: 156 KDI 158



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 8/137 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + +  LP  +E+L +L+ L L  N+L  LP ++G + NL  L L  N L +LP  
Sbjct: 236 LYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 295

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L +N+L  LP  + KL +L  L L +N++ T+  +I+ L NL  L + +
Sbjct: 296 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 355

Query: 226 N--------KIRELPPE 234
           N        +IR+L P+
Sbjct: 356 NQFSSQEKKRIRKLLPK 372


>gi|41282208|ref|NP_956156.2| leucine-rich repeat-containing protein 40 [Danio rerio]
 gi|37595350|gb|AAQ94561.1| hypothetical protein FLJ20331 [Danio rerio]
          Length = 601

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 146/502 (29%), Positives = 245/502 (48%), Gaps = 51/502 (10%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E +  L LS + +T LP  V +LT+L  L+L  N +  +P  +G + NL  L L+ N L 
Sbjct: 126 EQLQKLILSHNKLTELPSGVWRLTNLRCLHLQQNLIEQIPRDLGQLVNLDDLDLSNNHLI 185

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            +P+SLANLQ L  LDL  NKL  LP  + ++ +L++L    N+++++ P +  + +L  
Sbjct: 186 DIPESLANLQNLVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQ 245

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE-IGNCTMLVTLDLQHNELVNIPD 279
           L +R NK+R L PEL   K L  L   +N +E L  E + +   L  L+L+ N++ ++P+
Sbjct: 246 LYLRHNKLRYL-PELPCCKTLKELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPE 304

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +  L  L RL L+ N + S+P  L     L   ++EG  L ++   LL+  T    +  
Sbjct: 305 EITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTG-ELLKY 363

Query: 340 SRNKFTAYPSGG-------PTQFTSVYSIN-----------FEHNQIDKIPYGIFSRAKN 381
            R++    P+GG          F S   IN           +   Q   IP  +      
Sbjct: 364 LRSRVQEPPNGGLKEEPKTAMTFQSQAKINIHAIKTLKTLDYSEKQDASIPDDVLDAVDG 423

Query: 382 --LSKVNMKDNLLTSLP---LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
             ++ VN   N LT++P   +DL     L ++NLG N+++ +  D  +L  L  + L NN
Sbjct: 424 NPVANVNFSKNQLTAVPHRIVDLKD--TLADINLGFNKLTTIPADFCHLKQLMHIDLRNN 481

Query: 437 LLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
           LL  LP  +  L KL+ + L  N+ +S P  +  +  L+ +++ SNQ       +G +  
Sbjct: 482 LLISLPMELEGLIKLRSVILSFNRFKSFPEVLYRIPSLETILISSNQ-------VGGIDA 534

Query: 497 LSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ 556
           +               ++ TL  L TL L++N  +  +P EL  C++L+ + LD  P   
Sbjct: 535 V---------------QMKTLSRLSTLDLSNNDIM-QVPPELGNCTSLRALMLDGNPFRN 578

Query: 557 IPSEIVVGGPSLIIRYLKMQGP 578
             + I++ G   ++ YL+ + P
Sbjct: 579 PRAAILIKGTDAVLEYLRSRIP 600



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 167/354 (47%), Gaps = 50/354 (14%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L+L+   L E+P  +    +    + + N      D      +LT+L LS N+L+S+P+ 
Sbjct: 39  LNLSGRGLTEVPASVWRLNLDTPQEAKQNVSFGAEDRWWEQTDLTKLLLSSNKLQSIPDD 98

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           +     L   ++    LSSLPD  +  L  +  + LS NK T  PSG             
Sbjct: 99  VKLLPALVVLDIHDNQLSSLPDS-IGDLEQLQKLILSHNKLTELPSG------------- 144

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
                         R  NL  ++++ NL+  +P DLG  V L +L+L  N +  + E + 
Sbjct: 145 ------------VWRLTNLRCLHLQQNLIEQIPRDLGQLVNLDDLDLSNNHLIDIPESLA 192

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           NL NL  L LS N LK LP +I  ++ L+ LD   N++ES+P  +  ++ L++L L+ N+
Sbjct: 193 NLQNLVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNK 252

Query: 484 LVSLP-----------------------RAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L  LP                         + HL  LS L + +N ++S+PEEI  L+ L
Sbjct: 253 LRYLPELPCCKTLKELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGL 312

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
             L L +N  ++++P  L     L+ +SL+  PL  I  +++  G   +++YL+
Sbjct: 313 ERLDLTNND-ISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLR 365



 Score = 45.8 bits (107), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 24/151 (15%)

Query: 100 EENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL 159
           ++ + +++L  + +T +P     L  L  + L  N L SLP +                 
Sbjct: 447 KDTLADINLGFNKLTTIPADFCHLKQLMHIDLRNNLLISLPME----------------- 489

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNL 218
                 L  L +LR + L  N+    P V+Y++ SL+ + +  N++  +    ++ LS L
Sbjct: 490 ------LEGLIKLRSVILSFNRFKSFPEVLYRIPSLETILISSNQVGGIDAVQMKTLSRL 543

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHN 249
           S L + +N I ++PPELG   +L  L L  N
Sbjct: 544 STLDLSNNDIMQVPPELGNCTSLRALMLDGN 574


>gi|428164826|gb|EKX33838.1| hypothetical protein GUITHDRAFT_81033, partial [Guillardia theta
           CCMP2712]
          Length = 417

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 128/412 (31%), Positives = 217/412 (52%), Gaps = 14/412 (3%)

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
           +  L  L L GN+L    S    +TNL  L L  N +  +P S+ ++  L++L+  +NK+
Sbjct: 1   MVSLRTLNLAGNRLKEFASSFLQLTNLVNLFLNMNMIDCVPASVQHMTWLKLLNFSNNKI 60

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
             LP+ + KL SLK   + +N + T+ P I  ++ L+ LS+ +N+I  LPP LG + +L 
Sbjct: 61  GSLPLEIGKLNSLKTFIMSYNLLTTLPPTIGGMTALTELSVSNNQITRLPPILGVMTSLT 120

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            +++  N L++ P E+    +L+ L L+ N L NIP  +  L  LT L  S+N+L ++P 
Sbjct: 121 EVNIQDNFLDQHPVEVVEHALLLQLKLELNRLSNIPPEISRLSTLTFLNFSHNQLRTLPP 180

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR---NKFTAYP--SGGPTQFTS 357
           ++    +L    +    L+ LP      L  ++   LSR   N  T  P   G  T  T 
Sbjct: 181 SIGTLSNLTVLYLNDNKLTRLP----IELGHLSPTMLSRLDNNDITIIPVQVGNLTSLTE 236

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           ++    E N I  +   I  + ++L  ++M +N L  LP ++G    L EL +  N+I  
Sbjct: 237 LW---LEGNNIMFLSSSI-GKMQDLKVLHMHNNGLLYLPAEIGNLQTLIELRIPFNEIKV 292

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSI-GNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
           L  DI++  NL  L L +NLL  + + +  +L  L+ L++  N++  +P  +G L  LQ+
Sbjct: 293 LPADIKHCFNLRKLSLQHNLLSTVSADVLQSLTNLESLNISRNQIVYVPGTVGCLHALQK 352

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L +  NQ+ SLP  IG  ++L+ LS+  N   S+P+E+ +   L  L+++ N
Sbjct: 353 LRMDQNQVRSLPSEIGGCSSLTLLSITCNQFSSLPDELSSCSLLTALHISGN 404



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 211/394 (53%), Gaps = 11/394 (2%)

Query: 172 LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
           LR L+L  N+L E      +LT+L  L+L  N I  V   +Q+++ L +L+  +NKI  L
Sbjct: 4   LRTLNLAGNRLKEFASSFLQLTNLVNLFLNMNMIDCVPASVQHMTWLKLLNFSNNKIGSL 63

Query: 232 PPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLR 291
           P E+G+L +L T  +++N L  LP  IG  T L  L + +N++  +P +LG + +LT + 
Sbjct: 64  PLEIGKLNSLKTFIMSYNLLTTLPPTIGGMTALTELSVSNNQITRLPPILGVMTSLTEVN 123

Query: 292 LSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS-- 349
           +  N L+  P  + +   L +  +E   LS++P  + S L+++  +  S N+    P   
Sbjct: 124 IQDNFLDQHPVEVVEHALLLQLKLELNRLSNIPPEI-SRLSTLTFLNFSHNQLRTLPPSI 182

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKN-LSKVNMKDNLLTSLPLDLGTWVGLTEL 408
           G  +  T +Y      N++ ++P  +   +   LS+++  D  +T +P+ +G    LTEL
Sbjct: 183 GTLSNLTVLY---LNDNKLTRLPIELGHLSPTMLSRLDNND--ITIIPVQVGNLTSLTEL 237

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
            L  N I  LS  I  + +L+VL + NN L  LP+ IGNL+ L  L +  N+++ LP +I
Sbjct: 238 WLEGNNIMFLSSSIGKMQDLKVLHMHNNGLLYLPAEIGNLQTLIELRIPFNEIKVLPADI 297

Query: 469 GFLKELQRLILQSNQLVSLPR-AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
                L++L LQ N L ++    +  LTNL  L++  N +  +P  +G L  L  L ++ 
Sbjct: 298 KHCFNLRKLSLQHNLLSTVSADVLQSLTNLESLNISRNQIVYVPGTVGCLHALQKLRMDQ 357

Query: 528 NTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           N  + ++P E+  CS+L ++S+     S +P E+
Sbjct: 358 NQ-VRSLPSEIGGCSSLTLLSITCNQFSSLPDEL 390



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 197/416 (47%), Gaps = 54/416 (12%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N++NL L+ + I  +P SV+ +T L+ L    NK+ SLP +IG + +L    ++ N LT+
Sbjct: 26  NLVNLFLNMNMIDCVPASVQHMTWLKLLNFSNNKIGSLPLEIGKLNSLKTFIMSYNLLTT 85

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR-------------------- 201
           LP ++  +  L  L + +N++  LP ++  +TSL  + ++                    
Sbjct: 86  LPPTIGGMTALTELSVSNNQITRLPPILGVMTSLTEVNIQDNFLDQHPVEVVEHALLLQL 145

Query: 202 ---FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
               NR+  + P+I  LS L+ L+   N++R LPP +G L NL  L L  N L  LP E+
Sbjct: 146 KLELNRLSNIPPEISRLSTLTFLNFSHNQLRTLPPSIGTLSNLTVLYLNDNKLTRLPIEL 205

Query: 259 GNC--TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE 316
           G+   TML  LD  +N++  IP  +GNL +LT L L  N +  +  ++ K   L   ++ 
Sbjct: 206 GHLSPTMLSRLD--NNDITIIPVQVGNLTSLTELWLEGNNIMFLSSSIGKMQDLKVLHMH 263

Query: 317 GCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIF 376
              L  LP         I N+                   ++  +    N+I  +P  I 
Sbjct: 264 NNGLLYLP-------AEIGNL------------------QTLIELRIPFNEIKVLPADI- 297

Query: 377 SRAKNLSKVNMKDNLLTSLPLD-LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
               NL K++++ NLL+++  D L +   L  LN+  NQI  +   +  L  L+ L +  
Sbjct: 298 KHCFNLRKLSLQHNLLSTVSADVLQSLTNLESLNISRNQIVYVPGTVGCLHALQKLRMDQ 357

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
           N ++ LPS IG    L  L +  N+  SLP+E+     L  L +  N+   LPR I
Sbjct: 358 NQVRSLPSEIGGCSSLTLLSITCNQFSSLPDELSSCSLLTALHISGNRFFQLPRCI 413



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 169/344 (49%), Gaps = 25/344 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L +S + IT LPP +  +T L E+ +  N L   P ++     L  L L  N L+++P  
Sbjct: 99  LSVSNNQITRLPPILGVMTSLTEVNIQDNFLDQHPVEVVEHALLLQLKLELNRLSNIPPE 158

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           ++ L  L  L+  HN+L  LP  +  L++L +LYL  N++  +  ++ +LS   +  + +
Sbjct: 159 ISRLSTLTFLNFSHNQLRTLPPSIGTLSNLTVLYLNDNKLTRLPIELGHLSPTMLSRLDN 218

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N I  +P ++G L +L  L L  N++  L   IG    L  L + +N L+ +P  +GNL 
Sbjct: 219 NDITIIPVQVGNLTSLTELWLEGNNIMFLSSSIGKMQDLKVLHMHNNGLLYLPAEIGNLQ 278

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  LR+ +N ++ +P  +  C +L + +++   LS++   +L SLT++ ++ +SRN+  
Sbjct: 279 TLIELRIPFNEIKVLPADIKHCFNLRKLSLQHNLLSTVSADVLQSLTNLESLNISRNQIV 338

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                         G       L K+ M  N + SLP ++G    L
Sbjct: 339 YVP-------------------------GTVGCLHALQKLRMDQNQVRSLPSEIGGCSSL 373

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
           T L++  NQ S L +++ +   L  L +S N   +LP  I +L+
Sbjct: 374 TLLSITCNQFSSLPDELSSCSLLTALHISGNRFFQLPRCIESLK 417



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 24/181 (13%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +++  L +  + + +LP  +  L  L EL +  N++  LP+ I +  N          
Sbjct: 253 KMQDLKVLHMHNNGLLYLPAEIGNLQTLIELRIPFNEIKVLPADIKHCFN---------- 302

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPM-VVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
                        LR L L+HN L+ +   V+  LT+L+ L +  N+I  V   +  L  
Sbjct: 303 -------------LRKLSLQHNLLSTVSADVLQSLTNLESLNISRNQIVYVPGTVGCLHA 349

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L M  N++R LP E+G   +L  L +  N    LP E+ +C++L  L +  N    +
Sbjct: 350 LQKLRMDQNQVRSLPSEIGGCSSLTLLSITCNQFSSLPDELSSCSLLTALHISGNRFFQL 409

Query: 278 P 278
           P
Sbjct: 410 P 410


>gi|260832209|ref|XP_002611050.1| hypothetical protein BRAFLDRAFT_206003 [Branchiostoma floridae]
 gi|229296420|gb|EEN67060.1| hypothetical protein BRAFLDRAFT_206003 [Branchiostoma floridae]
          Length = 454

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 189/379 (49%), Gaps = 5/379 (1%)

Query: 172 LRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           ++VL+ +H  L   P  +++ T SL+ LYL  N+I+ +   +     L  L + DN++  
Sbjct: 15  IKVLEFQHANLEHAPPEIFEYTKSLEELYLDSNQIRDLPRPLFMCHGLQKLGLSDNELLM 74

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LPP +  L +L  LD++ N + +LP+ I  C  L  ++   N L  +PD    L+NLT L
Sbjct: 75  LPPAVASLVSLTELDISKNGIRDLPESIKACKNLTYVEASVNPLGKLPDGFTQLLNLTEL 134

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   ++ +P    +   L    V    + +LP  + S L  +  + +  N F+  P  
Sbjct: 135 YLNDTFMDYLPGNFGRLTRLKVLEVRENHMKTLPKSI-SRLILLERLDMGNNDFSELPEV 193

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                +S+  +  + N I   P  I    + LS ++   N L  LP ++     +T+L+L
Sbjct: 194 V-CHMSSLQELWVDSNAIHTFPQAI-RYLQRLSFLDASKNQLEDLPEEVEHLTKMTDLHL 251

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
            TN +  L   I  L  L VL + +N L  LP SIG L  L+ LD+  N LE LP  IG 
Sbjct: 252 STNLLQDLPAGIGALTQLVVLKVDDNQLLSLPHSIGGLASLQELDVSYNDLEHLPPTIGL 311

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L+ L+ LI   N L+ LP  +G  ++++ LSV  N L+ +P+EIG + NL  + ++DN  
Sbjct: 312 LRRLRTLIADENCLMELPAELGSCSSMTVLSVRSNQLERLPDEIGRIPNLKVINVSDNR- 370

Query: 531 LNNIPFELALCSNLQIMSL 549
           L  +PF       L  + L
Sbjct: 371 LEFLPFNFTKLKKLWALWL 389



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 179/345 (51%), Gaps = 5/345 (1%)

Query: 218 LSMLSMRDNKIRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           + +L  +   +   PPE+ E  K+L  L L  N + +LP+ +  C  L  L L  NEL+ 
Sbjct: 15  IKVLEFQHANLEHAPPEIFEYTKSLEELYLDSNQIRDLPRPLFMCHGLQKLGLSDNELLM 74

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  + +L++LT L +S N +  +PE++  C +L         L  LPDG  + L ++  
Sbjct: 75  LPPAVASLVSLTELDISKNGIRDLPESIKACKNLTYVEASVNPLGKLPDGF-TQLLNLTE 133

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L+ + F  Y  G   + T +  +    N +  +P  I SR   L +++M +N  + LP
Sbjct: 134 LYLN-DTFMDYLPGNFGRLTRLKVLEVRENHMKTLPKSI-SRLILLERLDMGNNDFSELP 191

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +     L EL + +N I    + I+ L  L  L  S N L+ LP  + +L K+  L L
Sbjct: 192 EVVCHMSSLQELWVDSNAIHTFPQAIRYLQRLSFLDASKNQLEDLPEEVEHLTKMTDLHL 251

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N L+ LP  IG L +L  L +  NQL+SLP +IG L +L  L V  N+L+ +P  IG 
Sbjct: 252 STNLLQDLPAGIGALTQLVVLKVDDNQLLSLPHSIGGLASLQELDVSYNDLEHLPPTIGL 311

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L TL  ++N CL  +P EL  CS++ ++S+ +  L ++P EI
Sbjct: 312 LRRLRTLIADEN-CLMELPAELGSCSSMTVLSVRSNQLERLPDEI 355



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 187/407 (45%), Gaps = 29/407 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           L+   +++ H PP + + T  LEELYL  N++  LP  +     L  LGL++N L  LP 
Sbjct: 18  LEFQHANLEHAPPEIFEYTKSLEELYLDSNQIRDLPRPLFMCHGLQKLGLSDNELLMLPP 77

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
           ++A+L  L  LD+  N + +LP  +    +L  +    N +  +      L NL+ L + 
Sbjct: 78  AVASLVSLTELDISKNGIRDLPESIKACKNLTYVEASVNPLGKLPDGFTQLLNLTELYLN 137

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           D  +  LP   G L  L  L++  NH++ LPK I    +L  LD+ +N+   +P+++ ++
Sbjct: 138 DTFMDYLPGNFGRLTRLKVLEVRENHMKTLPKSISRLILLERLDMGNNDFSELPEVVCHM 197

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
            +L  L +  N + + P+ +     L+  +     L  LP+  +  LT + ++ LS N  
Sbjct: 198 SSLQELWVDSNAIHTFPQAIRYLQRLSFLDASKNQLEDLPEE-VEHLTKMTDLHLSTNLL 256

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
              P+G                               L  + + DN L SLP  +G    
Sbjct: 257 QDLPAG-------------------------IGALTQLVVLKVDDNQLLSLPHSIGGLAS 291

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L EL++  N +  L   I  L  L  L+   N L +LP+ +G+   +  L +  N+LE L
Sbjct: 292 LQELDVSYNDLEHLPPTIGLLRRLRTLIADENCLMELPAELGSCSSMTVLSVRSNQLERL 351

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           P+EIG +  L+ + +  N+L  LP     L  L  L + EN  QS P
Sbjct: 352 PDEIGRIPNLKVINVSDNRLEFLPFNFTKLKKLWALWLAEN--QSKP 396



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 157/317 (49%), Gaps = 28/317 (8%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           CK  N+  ++ S + +  LP    +L +L ELYL    +  LP   G +T L  L + EN
Sbjct: 105 CK--NLTYVEASVNPLGKLPDGFTQLLNLTELYLNDTFMDYLPGNFGRLTRLKVLEVREN 162

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            + +LP S++ L  L  LD+ +N  +ELP VV  ++SL+ L++  N I T    I+YL  
Sbjct: 163 HMKTLPKSISRLILLERLDMGNNDFSELPEVVCHMSSLQELWVDSNAIHTFPQAIRYLQR 222

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           LS L    N++ +LP E+  L  +  L L+ N L++LP  IG  T LV L +  N+L+++
Sbjct: 223 LSFLDASKNQLEDLPEEVEHLTKMTDLHLSTNLLQDLPAGIGALTQLVVLKVDDNQLLSL 282

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  +G L +L  L +SYN LE +P T+     L     +   L  LP    + L S +++
Sbjct: 283 PHSIGGLASLQELDVSYNDLEHLPPTIGLLRRLRTLIADENCLMELP----AELGSCSSM 338

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
           T+                     ++   NQ++++P  I  R  NL  +N+ DN L  LP 
Sbjct: 339 TV---------------------LSVRSNQLERLPDEI-GRIPNLKVINVSDNRLEFLPF 376

Query: 398 DLGTWVGLTELNLGTNQ 414
           +      L  L L  NQ
Sbjct: 377 NFTKLKKLWALWLAENQ 393



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 1/211 (0%)

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
            P +   +  + F+H  ++  P  IF   K+L ++ +  N +  LP  L    GL +L L
Sbjct: 8   APREKVVIKVLEFQHANLEHAPPEIFEYTKSLEELYLDSNQIRDLPRPLFMCHGLQKLGL 67

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N++  L   + +LV+L  L +S N ++ LP SI   + L  ++   N L  LP+    
Sbjct: 68  SDNELLMLPPAVASLVSLTELDISKNGIRDLPESIKACKNLTYVEASVNPLGKLPDGFTQ 127

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L  L L    +  LP   G LT L  L V EN+++++P+ I  L  L  L + +N  
Sbjct: 128 LLNLTELYLNDTFMDYLPGNFGRLTRLKVLEVRENHMKTLPKSISRLILLERLDMGNND- 186

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            + +P  +   S+LQ + +D+  +   P  I
Sbjct: 187 FSELPEVVCHMSSLQELWVDSNAIHTFPQAI 217



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 58/105 (55%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD+S + + HLPP++  L  L  L    N L  LP+++G  +++T L +  N L  LPD 
Sbjct: 295 LDVSYNDLEHLPPTIGLLRRLRTLIADENCLMELPAELGSCSSMTVLSVRSNQLERLPDE 354

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
           +  +  L+V+++  N+L  LP    KL  L  L+L  N+ K + P
Sbjct: 355 IGRIPNLKVINVSDNRLEFLPFNFTKLKKLWALWLAENQSKPLIP 399



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 65/128 (50%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L +  + +  LP S+  L  L+EL +  N L  LP  IG +  L  L   EN L  LP  
Sbjct: 272 LKVDDNQLLSLPHSIGGLASLQELDVSYNDLEHLPPTIGLLRRLRTLIADENCLMELPAE 331

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L +   + VL +R N+L  LP  + ++ +LK++ +  NR++ +  +   L  L  L + +
Sbjct: 332 LGSCSSMTVLSVRSNQLERLPDEIGRIPNLKVINVSDNRLEFLPFNFTKLKKLWALWLAE 391

Query: 226 NKIRELPP 233
           N+ + L P
Sbjct: 392 NQSKPLIP 399


>gi|348506994|ref|XP_003441042.1| PREDICTED: leucine-rich repeat-containing protein 1 [Oreochromis
           niloticus]
          Length = 524

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 191/351 (54%), Gaps = 6/351 (1%)

Query: 210 PD--IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
           PD   +Y  +L  L +  N++R+LP +  +L  L  L L+ N ++ +P EI N   LV L
Sbjct: 28  PDEIFRYGRSLEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQIIPAEIANFMQLVEL 87

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
           D+  N+++ IPD + +   L     S N L  +PE+ ++  +L   ++   +L  LP G 
Sbjct: 88  DVSRNDILGIPDSISHCKALQVADFSGNPLTKLPESFTELRNLTCLSINDISLQLLP-GN 146

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
           + +L+++ ++ L  N  T  P    +Q   +  ++  +N++  +P  I     +L  + +
Sbjct: 147 IGNLSNLVSLELRENVLTFLPES-LSQLHKLEELDLGNNELYSLPQSI-GHLVSLKDLWL 204

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
             N LT +P +LG    L  L++  N++ KL E++  LV+L  L++S N +  LP SIG 
Sbjct: 205 DGNHLTEIPAELGNIKSLLCLDVSENKLEKLPEEMGGLVSLTDLLVSQNNIDSLPESIGK 264

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           LRKL  L +++N+L  LP  IG  + L  L+L  NQL SLPR+IG L  L +L+   N L
Sbjct: 265 LRKLSILKVDQNQLAYLPESIGNCESLSELVLTENQLQSLPRSIGKLKRLFHLNCDRNQL 324

Query: 508 QSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            S+P+EIG   +L+   + +N  L  IP EL+  + L ++ +    L+ +P
Sbjct: 325 LSLPKEIGGCSSLNVFCVRENR-LTRIPSELSQATELHVLDVSGNRLTHLP 374



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/345 (33%), Positives = 170/345 (49%), Gaps = 48/345 (13%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L +LPK+      L  L L  NE+  IP  + N + L  L +S N + 
Sbjct: 36  RSLEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQIIPAEIANFMQLVELDVSRNDIL 95

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
            +P+++S C  L   +  G  L+ LP+    S T + N+T                    
Sbjct: 96  GIPDSISHCKALQVADFSGNPLTKLPE----SFTELRNLT-------------------C 132

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
            SIN    Q+  +P G      NL  + +++N+LT LP  L     L EL+LG N++  L
Sbjct: 133 LSINDISLQL--LP-GNIGNLSNLVSLELRENVLTFLPESLSQLHKLEELDLGNNELYSL 189

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
            + I +LV+L+ L L  N L ++P+ +GN++ L CLD+ ENKLE LP E+G L  L  L+
Sbjct: 190 PQSIGHLVSLKDLWLDGNHLTEIPAELGNIKSLLCLDVSENKLEKLPEEMGGLVSLTDLL 249

Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN---------- 528
           +  N + SLP +IG L  LS L V +N L  +PE IG  E+L  L L +N          
Sbjct: 250 VSQNNIDSLPESIGKLRKLSILKVDQNQLAYLPESIGNCESLSELVLTENQLQSLPRSIG 309

Query: 529 --------TCLNN----IPFELALCSNLQIMSLDNCPLSQIPSEI 561
                    C  N    +P E+  CS+L +  +    L++IPSE+
Sbjct: 310 KLKRLFHLNCDRNQLLSLPKEIGGCSSLNVFCVRENRLTRIPSEL 354



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 195/391 (49%), Gaps = 8/391 (2%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++  +D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 7   LWRCNR-HVETIDKRHCSLLYVPDEIFRYGRSLEELLLDANQLRDLPKQFFQLVKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  +P  +AN  QL  LD+  N +  +P  +    +L++     N +  +     
Sbjct: 66  LSDNEIQIIPAEIANFMQLVELDVSRNDILGIPDSISHCKALQVADFSGNPLTKLPESFT 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL+ LS+ D  ++ LP  +G L NLV+L+L  N L  LP+ +     L  LDL +NE
Sbjct: 126 ELRNLTCLSINDISLQLLPGNIGNLSNLVSLELRENVLTFLPESLSQLHKLEELDLGNNE 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L ++P  +G+L++L  L L  N L  +P  L     L   +V    L  LP+  +  L S
Sbjct: 186 LYSLPQSIGHLVSLKDLWLDGNHLTEIPAELGNIKSLLCLDVSENKLEKLPEE-MGGLVS 244

Query: 334 INNITLSRNKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
           + ++ +S+N   + P S G  +  S+  +  + NQ+  +P  I    ++LS++ + +N L
Sbjct: 245 LTDLLVSQNNIDSLPESIGKLRKLSILKV--DQNQLAYLPESI-GNCESLSELVLTENQL 301

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
            SLP  +G    L  LN   NQ+  L ++I    +L V  +  N L ++PS +    +L 
Sbjct: 302 QSLPRSIGKLKRLFHLNCDRNQLLSLPKEIGGCSSLNVFCVRENRLTRIPSELSQATELH 361

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
            LD+  N+L  LP  +  L +L+ L L  NQ
Sbjct: 362 VLDVSGNRLTHLPLSLTTL-QLKALWLSENQ 391



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 188/407 (46%), Gaps = 32/407 (7%)

Query: 125 HLEELYLYGNKLASLPSQI-GYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLN 183
           H+E +      L  +P +I  Y  +L  L L  N L  LP     L +LR L L  N++ 
Sbjct: 13  HVETIDKRHCSLLYVPDEIFRYGRSLEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQ 72

Query: 184 ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVT 243
            +P  +     L  L +  N I  +   I +   L +     N + +LP    EL+NL  
Sbjct: 73  IIPAEIANFMQLVELDVSRNDILGIPDSISHCKALQVADFSGNPLTKLPESFTELRNLTC 132

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L +    L+ LP  IGN + LV+L+L+ N L  +P+ L  L  L  L L  N L S+P++
Sbjct: 133 LSINDISLQLLPGNIGNLSNLVSLELRENVLTFLPESLSQLHKLEELDLGNNELYSLPQS 192

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSI 361
           +   V L +  ++G  L+ +P   L ++ S+  + +S NK    P   GG    T +   
Sbjct: 193 IGHLVSLKDLWLDGNHLTEIP-AELGNIKSLLCLDVSENKLEKLPEEMGGLVSLTDLL-- 249

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
               N ID                        SLP  +G    L+ L +  NQ++ L E 
Sbjct: 250 -VSQNNID------------------------SLPESIGKLRKLSILKVDQNQLAYLPES 284

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           I N  +L  LVL+ N L+ LP SIG L++L  L+ + N+L SLP EIG    L    ++ 
Sbjct: 285 IGNCESLSELVLTENQLQSLPRSIGKLKRLFHLNCDRNQLLSLPKEIGGCSSLNVFCVRE 344

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           N+L  +P  +   T L  L V  N L  +P  + TL+ L  L+L++N
Sbjct: 345 NRLTRIPSELSQATELHVLDVSGNRLTHLPLSLTTLQ-LKALWLSEN 390



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 154/287 (53%), Gaps = 4/287 (1%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           L I      CK   +   D S + +T LP S  +L +L  L +    L  LP  IG ++N
Sbjct: 95  LGIPDSISHCKALQVA--DFSGNPLTKLPESFTELRNLTCLSINDISLQLLPGNIGNLSN 152

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L L EN LT LP+SL+ L +L  LDL +N+L  LP  +  L SLK L+L  N +  +
Sbjct: 153 LVSLELRENVLTFLPESLSQLHKLEELDLGNNELYSLPQSIGHLVSLKDLWLDGNHLTEI 212

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
             ++  + +L  L + +NK+ +LP E+G L +L  L ++ N+++ LP+ IG    L  L 
Sbjct: 213 PAELGNIKSLLCLDVSENKLEKLPEEMGGLVSLTDLLVSQNNIDSLPESIGKLRKLSILK 272

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
           +  N+L  +P+ +GN  +L+ L L+ N+L+S+P ++ K   L   N +   L SLP   +
Sbjct: 273 VDQNQLAYLPESIGNCESLSELVLTENQLQSLPRSIGKLKRLFHLNCDRNQLLSLPKE-I 331

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
              +S+N   +  N+ T  PS   +Q T ++ ++   N++  +P  +
Sbjct: 332 GGCSSLNVFCVRENRLTRIPS-ELSQATELHVLDVSGNRLTHLPLSL 377



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 171/359 (47%), Gaps = 27/359 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + I  +P  +     L EL +  N +  +P  I +   L     + N LT LP+S
Sbjct: 64  LGLSDNEIQIIPAEIANFMQLVELDVSRNDILGIPDSISHCKALQVADFSGNPLTKLPES 123

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
              L+ L  L +    L  LP  +  L++L  L LR N +  +   +  L  L  L + +
Sbjct: 124 FTELRNLTCLSINDISLQLLPGNIGNLSNLVSLELRENVLTFLPESLSQLHKLEELDLGN 183

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP  +G L +L  L L  NHL E+P E+GN   L+ LD+  N+L  +P+ +G L+
Sbjct: 184 NELYSLPQSIGHLVSLKDLWLDGNHLTEIPAELGNIKSLLCLDVSENKLEKLPEEMGGLV 243

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +LT L +S N ++S+PE++ K   L+   V+   L+ LP+       SI N         
Sbjct: 244 SLTDLLVSQNNIDSLPESIGKLRKLSILKVDQNQLAYLPE-------SIGNC-------- 288

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                      S+  +    NQ+  +P  I  + K L  +N   N L SLP ++G    L
Sbjct: 289 ----------ESLSELVLTENQLQSLPRSI-GKLKRLFHLNCDRNQLLSLPKEIGGCSSL 337

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
               +  N+++++  ++     L VL +S N L  LP S+  L +LK L L EN+ + L
Sbjct: 338 NVFCVRENRLTRIPSELSQATELHVLDVSGNRLTHLPLSLTTL-QLKALWLSENQSQPL 395


>gi|158536478|gb|ABW72733.1| flagellin-sensing 2-like protein [Chorispora tenella]
          Length = 679

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 169/488 (34%), Positives = 245/488 (50%), Gaps = 50/488 (10%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-L 162
           LDL+ ++ T  +P  + +LT L +L LY N    S+PS+I  + NL  L L  N LT  +
Sbjct: 11  LDLTSNNFTGKIPAEIGELTMLNQLSLYLNYFSGSIPSEIWELKNLASLDLRNNLLTGDV 70

Query: 163 PDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSM 220
           P+++   + L ++ + +N L   +P  +  L +L++     NRI    P  I  L NL+ 
Sbjct: 71  PEAICQTRSLVLVGIGNNNLTGRIPDCLGDLVNLQMFVADINRISGPIPVSIGSLVNLTG 130

Query: 221 LSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-I 277
           L +  N++  ++P E+G L NL  L L  N LE E+P EIGNCT LV L+L  N+L   I
Sbjct: 131 LDLSGNQLTGKIPREIGNLSNLQVLGLGSNLLEGEIPAEIGNCTNLVELELYGNQLTGRI 190

Query: 278 PDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCAL-SSLPD--GLLSSLTS 333
           P  LGNL  L  LRL  N L S +P +LS+   L    + G  L   +P   GLL SL  
Sbjct: 191 PAELGNLFQLELLRLFKNNLNSTIPSSLSRLTRLTNLGLSGNQLVGPIPKEIGLLQSLEV 250

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI-DKIP--YGIFSRAKNLSKVNMKDN 390
              +TL  N  T       T   ++ +I    N I  ++P   GI +  +NLS  N   N
Sbjct: 251 ---LTLQSNNLTGEFPQSITNMRNLTAITMGFNYISGELPADLGILTNLRNLSAHN---N 304

Query: 391 LLTS-LPLDLGTWVGLTELNLGTNQIS------------------------KLSEDIQNL 425
           LLT  +P  +    GL  L+L  NQ++                        ++  DI N 
Sbjct: 305 LLTGPIPSSISNCTGLKVLDLSHNQMTGKIPRGLGRMNLTAISLGPNRFTGEIPYDIFNC 364

Query: 426 VNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQ 483
            NLE L L+ NNL   L   IG L+KL+ L +  N L   +P EIG L+EL  L LQ+N 
Sbjct: 365 SNLETLNLAENNLTGTLNPLIGKLQKLRILQVSFNSLTGNIPGEIGNLRELNLLYLQANH 424

Query: 484 LVS-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
               +PR + +LT L  +++  N+L+S IPEEI  ++ L  L L++N     IP   +  
Sbjct: 425 FTGKIPREMSNLTLLQGIALHMNDLESPIPEEIFDMKQLSLLELSNNKFSGPIPVLFSKL 484

Query: 542 SNLQIMSL 549
            +L  +SL
Sbjct: 485 ESLSYLSL 492



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 151/506 (29%), Positives = 235/506 (46%), Gaps = 76/506 (15%)

Query: 115 HLPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQL 172
            +P  +   T+L EL LYGN+L   +P+++G +  L  L L +N+L S +P SL+ L +L
Sbjct: 165 EIPAEIGNCTNLVELELYGNQLTGRIPAELGNLFQLELLRLFKNNLNSTIPSSLSRLTRL 224

Query: 173 RVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIR- 229
             L L  N+L   +P  +  L SL++L L+ N +    P  I  + NL+ ++M  N I  
Sbjct: 225 TNLGLSGNQLVGPIPKEIGLLQSLEVLTLQSNNLTGEFPQSITNMRNLTAITMGFNYISG 284

Query: 230 ELPPELGELKNLVTLDLAHNHL--EELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLIN 286
           ELP +LG L NL  L  AHN+L    +P  I NCT L  LDL HN++   IP  LG + N
Sbjct: 285 ELPADLGILTNLRNLS-AHNNLLTGPIPSSISNCTGLKVLDLSHNQMTGKIPRGLGRM-N 342

Query: 287 LTRLRLSYNRLES-VPETLSKC-----VHLNEFNVEG----------------CALSSLP 324
           LT + L  NR    +P  +  C     ++L E N+ G                 + +SL 
Sbjct: 343 LTAISLGPNRFTGEIPYDIFNCSNLETLNLAENNLTGTLNPLIGKLQKLRILQVSFNSLT 402

Query: 325 D---GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK-IPYGIFSRAK 380
               G + +L  +N + L  N FT       +  T +  I    N ++  IP  IF   K
Sbjct: 403 GNIPGEIGNLRELNLLYLQANHFTGKIPREMSNLTLLQGIALHMNDLESPIPEEIFD-MK 461

Query: 381 NLSKVNMKDNLLTS-LPLDLGTWVGLTELNLGTNQI-SKLSEDIQNLVNLEVLVLSNNLL 438
            LS + + +N  +  +P+       L+ L+L  N+    +   +++L NL    +S+NLL
Sbjct: 462 QLSLLELSNNKFSGPIPVLFSKLESLSYLSLQGNKFNGSIPASLKSLSNLNTFDISDNLL 521

Query: 439 -----KKLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQLV-SLPRAI 491
                 KL SS+ N++    L+   N L  ++PNE+G L+ +Q +   +N    S+PR++
Sbjct: 522 TGTIPDKLLSSMRNMQL--YLNFSNNFLTGTIPNELGKLEMVQEIDFSNNLFSGSVPRSL 579

Query: 492 GHLTNLSYLSVGENNLQS----------------------------IPEEIGTLENLHTL 523
               N+  L    NNL                              IP+  G L++L +L
Sbjct: 580 QACKNVFSLDFSRNNLSGQIPDEVFQPGGSDMIKSMNLSRNSLSGGIPKSFGNLKHLVSL 639

Query: 524 YLNDNTCLNNIPFELALCSNLQIMSL 549
            L+ N     IP  LA  S L+ + L
Sbjct: 640 DLSSNHLTGEIPENLANLSTLKHLKL 665



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 186/411 (45%), Gaps = 42/411 (10%)

Query: 115 HLPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQL 172
             P S+  + +L  + +  N ++  LP+ +G +TNL  L    N LT  +P S++N   L
Sbjct: 261 EFPQSITNMRNLTAITMGFNYISGELPADLGILTNLRNLSAHNNLLTGPIPSSISNCTGL 320

Query: 173 RVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSMLSMRDNKIR- 229
           +VLDL HN++  ++P  + ++ +L  + L  NR     P DI   SNL  L++ +N +  
Sbjct: 321 KVLDLSHNQMTGKIPRGLGRM-NLTAISLGPNRFTGEIPYDIFNCSNLETLNLAENNLTG 379

Query: 230 ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINL 287
            L P +G+L+ L  L ++ N L   +P EIGN   L  L LQ N     IP  + NL  L
Sbjct: 380 TLNPLIGKLQKLRILQVSFNSLTGNIPGEIGNLRELNLLYLQANHFTGKIPREMSNLTLL 439

Query: 288 TRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
             + L  N LES +PE +     L+   +     S     L S L S++ ++L  NKF  
Sbjct: 440 QGIALHMNDLESPIPEEIFDMKQLSLLELSNNKFSGPIPVLFSKLESLSYLSLQGNKFNG 499

Query: 347 YPSGGPTQFTSVYSINFEHNQI-DKIPYGIFSRAKNLS-KVNMKDNLLT-SLPLDLGTWV 403
                    +++ + +   N +   IP  + S  +N+   +N  +N LT ++P +LG   
Sbjct: 500 SIPASLKSLSNLNTFDISDNLLTGTIPDKLLSSMRNMQLYLNFSNNFLTGTIPNELGKLE 559

Query: 404 GLTELNLGTNQIS-KLSEDIQNLVNLEVLVLS---------------------------- 434
            + E++   N  S  +   +Q   N+  L  S                            
Sbjct: 560 MVQEIDFSNNLFSGSVPRSLQACKNVFSLDFSRNNLSGQIPDEVFQPGGSDMIKSMNLSR 619

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQL 484
           N+L   +P S GNL+ L  LDL  N L   +P  +  L  L+ L L SN L
Sbjct: 620 NSLSGGIPKSFGNLKHLVSLDLSSNHLTGEIPENLANLSTLKHLKLASNHL 670



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 89/179 (49%), Gaps = 6/179 (3%)

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVLSNNLL-KKLPSSIG 446
           +N    +P ++G    L +L+L  N  S  +  +I  L NL  L L NNLL   +P +I 
Sbjct: 16  NNFTGKIPAEIGELTMLNQLSLYLNYFSGSIPSEIWELKNLASLDLRNNLLTGDVPEAIC 75

Query: 447 NLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGE 504
             R L  + +  N L   +P+ +G L  LQ  +   N++   +P +IG L NL+ L +  
Sbjct: 76  QTRSLVLVGIGNNNLTGRIPDCLGDLVNLQMFVADINRISGPIPVSIGSLVNLTGLDLSG 135

Query: 505 NNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL-DNCPLSQIPSEI 561
           N L   IP EIG L NL  L L  N     IP E+  C+NL  + L  N    +IP+E+
Sbjct: 136 NQLTGKIPREIGNLSNLQVLGLGSNLLEGEIPAEIGNCTNLVELELYGNQLTGRIPAEL 194



 Score = 45.4 bits (106), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 36/219 (16%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNL 149
           I +E    K+ ++L L  +K S   +P    KL  L  L L GNK   S+P+ +  ++NL
Sbjct: 453 IPEEIFDMKQLSLLELSNNKFS-GPIPVLFSKLESLSYLSLQGNKFNGSIPASLKSLSNL 511

Query: 150 TCLGLAENSLT---------------------------SLPDSLANLQQLRVLDLRHNKL 182
               +++N LT                           ++P+ L  L+ ++ +D  +N  
Sbjct: 512 NTFDISDNLLTGTIPDKLLSSMRNMQLYLNFSNNFLTGTIPNELGKLEMVQEIDFSNNLF 571

Query: 183 -NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML--SM---RDNKIRELPPELG 236
              +P  +    ++  L    N +    PD  +    S +  SM   R++    +P   G
Sbjct: 572 SGSVPRSLQACKNVFSLDFSRNNLSGQIPDEVFQPGGSDMIKSMNLSRNSLSGGIPKSFG 631

Query: 237 ELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNEL 274
            LK+LV+LDL+ NHL  E+P+ + N + L  L L  N L
Sbjct: 632 NLKHLVSLDLSSNHLTGEIPENLANLSTLKHLKLASNHL 670


>gi|195430322|ref|XP_002063205.1| GK21518 [Drosophila willistoni]
 gi|194159290|gb|EDW74191.1| GK21518 [Drosophila willistoni]
          Length = 831

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 198/389 (50%), Gaps = 26/389 (6%)

Query: 172 LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
           +++LD  +  L + P V     +L+ LYL   R++T+ P + Y   L +L +  N +  +
Sbjct: 19  IQILDYSNTPLTDFPEVWQHERTLEELYLSTTRLQTLPPQLFYCQGLRVLHVNSNNLESI 78

Query: 232 PPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLR 291
           P  +G LK L  LDL  N +  +P EI +C  L  LDL  N L  +PD + +LI+L  L 
Sbjct: 79  PQAIGSLKQLQHLDLNRNLIVNVPDEIKSCKHLTHLDLSCNSLQRLPDAVTSLISLQELL 138

Query: 292 LSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGG 351
           L+   LE +P    + V+L    +    L +LP  ++  L ++  + +  N+FT  P   
Sbjct: 139 LNETYLEFLPANFGRLVNLRILELRLNNLITLPKSMVR-LVNLQRLDIGGNEFTELPEVV 197

Query: 352 PTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW--------- 402
             +  S+  +  + NQI ++   I  + + L       NLL SLP +L  W         
Sbjct: 198 -GELKSLKELWIDFNQIRRVSANI-GKLRELQHFEANGNLLDSLPNELSQWRNVEVLSIC 255

Query: 403 ----------VG----LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
                     VG    L      +N +S+L + I  L  LE LVLS+N L +LPS+IG L
Sbjct: 256 SNNLEAFPFSVGMLKSLVTFKCESNGLSELPDSISYLEQLEELVLSHNKLMRLPSTIGML 315

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
           ++L+ L  ++N+L  LP+E+   ++L  L + +NQL +LP+ IG+L  L  L+V  N + 
Sbjct: 316 KRLRFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLGKLRVLNVVNNYIN 375

Query: 509 SIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           ++P  + +L  L +L+L+DN     +P +
Sbjct: 376 ALPVSMLSLVQLTSLWLSDNQSQPLVPLQ 404



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 194/386 (50%), Gaps = 5/386 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           ++E I  LD S + +T  P   +    LEELYL   +L +LP Q+ Y   L  L +  N+
Sbjct: 15  RQEVIQILDYSNTPLTDFPEVWQHERTLEELYLSTTRLQTLPPQLFYCQGLRVLHVNSNN 74

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L S+P ++ +L+QL+ LDL  N +  +P  +     L  L L  N ++ +   +  L +L
Sbjct: 75  LESIPQAIGSLKQLQHLDLNRNLIVNVPDEIKSCKHLTHLDLSCNSLQRLPDAVTSLISL 134

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L + +  +  LP   G L NL  L+L  N+L  LPK +     L  LD+  NE   +P
Sbjct: 135 QELLLNETYLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTELP 194

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           +++G L +L  L + +N++  V   + K   L  F   G  L SLP+  LS   ++  ++
Sbjct: 195 EVVGELKSLKELWIDFNQIRRVSANIGKLRELQHFEANGNLLDSLPNE-LSQWRNVEVLS 253

Query: 339 LSRNKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
           +  N   A+P S G     S+ +   E N + ++P  I S  + L ++ +  N L  LP 
Sbjct: 254 ICSNNLEAFPFSVG--MLKSLVTFKCESNGLSELPDSI-SYLEQLEELVLSHNKLMRLPS 310

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
            +G    L  L    NQ+ +L +++ +   L VL ++NN L  LP +IGNL KL+ L++ 
Sbjct: 311 TIGMLKRLRFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLGKLRVLNVV 370

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQ 483
            N + +LP  +  L +L  L L  NQ
Sbjct: 371 NNYINALPVSMLSLVQLTSLWLSDNQ 396



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 159/326 (48%), Gaps = 28/326 (8%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           +N+  E   CK  ++ +LDLS +S+  LP +V  L  L+EL L    L  LP+  G + N
Sbjct: 99  VNVPDEIKSCK--HLTHLDLSCNSLQRLPDAVTSLISLQELLLNETYLEFLPANFGRLVN 156

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L L  N+L +LP S+  L  L+ LD+  N+  ELP VV +L SLK L++ FN+I+ V
Sbjct: 157 LRILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVGELKSLKELWIDFNQIRRV 216

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
             +I  L  L       N +  LP EL + +N+  L +  N+LE  P  +G    LVT  
Sbjct: 217 SANIGKLRELQHFEANGNLLDSLPNELSQWRNVEVLSICSNNLEAFPFSVGMLKSLVTFK 276

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
            + N L  +PD +  L  L  L LS+N+L  +P T+     L     +   L  LPD L 
Sbjct: 277 CESNGLSELPDSISYLEQLEELVLSHNKLMRLPSTIGMLKRLRFLFADDNQLRQLPDELC 336

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           S                        Q  SV S+   +NQ+  +P  I +  K L  +N+ 
Sbjct: 337 S-----------------------CQQLSVLSV--ANNQLSALPQNIGNLGK-LRVLNVV 370

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQ 414
           +N + +LP+ + + V LT L L  NQ
Sbjct: 371 NNYINALPVSMLSLVQLTSLWLSDNQ 396



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 71/133 (53%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           ++++      + ++ LP S+  L  LEEL L  NKL  LPS IG +  L  L   +N L 
Sbjct: 270 KSLVTFKCESNGLSELPDSISYLEQLEELVLSHNKLMRLPSTIGMLKRLRFLFADDNQLR 329

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LPD L + QQL VL + +N+L+ LP  +  L  L++L +  N I  +   +  L  L+ 
Sbjct: 330 QLPDELCSCQQLSVLSVANNQLSALPQNIGNLGKLRVLNVVNNYINALPVSMLSLVQLTS 389

Query: 221 LSMRDNKIRELPP 233
           L + DN+ + L P
Sbjct: 390 LWLSDNQSQPLVP 402


>gi|440791139|gb|ELR12393.1| leucine rich repeat domain containing protein, partial
           [Acanthamoeba castellanii str. Neff]
          Length = 738

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 131/395 (33%), Positives = 197/395 (49%), Gaps = 28/395 (7%)

Query: 194 SLKILYLRFNR--IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHL 251
           S K+L L  N+  I ++ P I  L  L  +++R N ++ELP E GEL++L  L L+ N L
Sbjct: 294 SFKVLRLNLNKQYIPSLPPMIGRLRFLQTINLRRNHLQELPAEFGELRDLQYLTLSFNRL 353

Query: 252 EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN 311
           + LP   GN T L  LDL  N+L  +PD    L  L  L +SYN+L S+P       H  
Sbjct: 354 QRLPDTFGNLTNLRMLDLHSNKLTRLPDSFVKLGRLEYLTVSYNQLNSLPRGFGDHFHRL 413

Query: 312 EF-NVEGCALSSLP--DGLL--------------------SSLTSINNITLSRNKFTAYP 348
           EF N+E   LSS P  +GLL                    S+ +S+  + +  N+ T +P
Sbjct: 414 EFLNLENNQLSSPPSSEGLLMPMANEDDDGNTHSLVITPQSNFSSLITLRVGCNQLTTFP 473

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
            G     T+++ +N   NQI  IP  I +   NL  + +  N +  +P  +G    L  L
Sbjct: 474 PGLCDYVTTLHELNLSRNQISYIPPAI-TNLTNLRLLYLGVNPIEVIPRSIGVLENLYVL 532

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
            +    I+ L E++  L NLE L L  N  + LP  I  +  L+ LDL   ++ +LP EI
Sbjct: 533 GIHQTFIADLPEELTLLHNLETLYLRKNAFRVLPDVIFQMTMLRKLDLNFIRMTNLPGEI 592

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G L  L+ L L+   +  LPR I +L  L+ L +  NN+ ++PEE+  L NL TL +  N
Sbjct: 593 GQLTNLEILQLRETMIKVLPREITNLRKLTDLDLSLNNMTTVPEEVLELANLRTLEIMYN 652

Query: 529 TCLNNIPFELA-LCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P EL      L+ + + +  L+++P  I 
Sbjct: 653 -HLQTLPPELGNKLGRLKNLDVSHNKLTKLPPSIA 686



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 211/431 (48%), Gaps = 29/431 (6%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           +L L+L+K  I  LPP + +L  L+ + L  N L  LP++ G + +L  L L+ N L  L
Sbjct: 297 VLRLNLNKQYIPSLPPMIGRLRFLQTINLRRNHLQELPAEFGELRDLQYLTLSFNRLQRL 356

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI-QYLSNLSML 221
           PD+  NL  LR+LDL  NKL  LP    KL  L+ L + +N++ ++      +   L  L
Sbjct: 357 PDTFGNLTNLRMLDLHSNKLTRLPDSFVKLGRLEYLTVSYNQLNSLPRGFGDHFHRLEFL 416

Query: 222 SMRDNKIRELPPELG-----------------------ELKNLVTLDLAHNHLEELPKEI 258
           ++ +N++   P   G                          +L+TL +  N L   P  +
Sbjct: 417 NLENNQLSSPPSSEGLLMPMANEDDDGNTHSLVITPQSNFSSLITLRVGCNQLTTFPPGL 476

Query: 259 GN-CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
            +  T L  L+L  N++  IP  + NL NL  L L  N +E +P ++    +L    +  
Sbjct: 477 CDYVTTLHELNLSRNQISYIPPAITNLTNLRLLYLGVNPIEVIPRSIGVLENLYVLGIHQ 536

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
             ++ LP+  L+ L ++  + L +N F   P     Q T +  ++    ++  +P G   
Sbjct: 537 TFIADLPEE-LTLLHNLETLYLRKNAFRVLPD-VIFQMTMLRKLDLNFIRMTNLP-GEIG 593

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
           +  NL  + +++ ++  LP ++     LT+L+L  N ++ + E++  L NL  L +  N 
Sbjct: 594 QLTNLEILQLRETMIKVLPREITNLRKLTDLDLSLNNMTTVPEEVLELANLRTLEIMYNH 653

Query: 438 LKKLPSSIGN-LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
           L+ LP  +GN L +LK LD+  NKL  LP  I  L EL++L L  N+L  +P  +  L +
Sbjct: 654 LQTLPPELGNKLGRLKNLDVSHNKLTKLPPSIAKLVELRQLDLSCNKLPHIPEEVLRLPH 713

Query: 497 LSYLSVGENNL 507
           L +LS G N L
Sbjct: 714 LKFLSFGYNKL 724



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 139/241 (57%), Gaps = 2/241 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS++ I+++PP++  LT+L  LYL  N +  +P  IG + NL  LG+ +  +  LP+ 
Sbjct: 486 LNLSRNQISYIPPAITNLTNLRLLYLGVNPIEVIPRSIGVLENLYVLGIHQTFIADLPEE 545

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L  L  L  L LR N    LP V++++T L+ L L F R+  +  +I  L+NL +L +R+
Sbjct: 546 LTLLHNLETLYLRKNAFRVLPDVIFQMTMLRKLDLNFIRMTNLPGEIGQLTNLEILQLRE 605

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN-L 284
             I+ LP E+  L+ L  LDL+ N++  +P+E+     L TL++ +N L  +P  LGN L
Sbjct: 606 TMIKVLPREITNLRKLTDLDLSLNNMTTVPEEVLELANLRTLEIMYNHLQTLPPELGNKL 665

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             L  L +S+N+L  +P +++K V L + ++    L  +P+ +L  L  +  ++   NK 
Sbjct: 666 GRLKNLDVSHNKLTKLPPSIAKLVELRQLDLSCNKLPHIPEEVL-RLPHLKFLSFGYNKL 724

Query: 345 T 345
           T
Sbjct: 725 T 725



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 171/368 (46%), Gaps = 25/368 (6%)

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L+  S  D+ + E   E  +   ++ L+L   ++  LP  IG    L T++L+ N L  +
Sbjct: 274 LASASPSDHGVLERTAEATDSFKVLRLNLNKQYIPSLPPMIGRLRFLQTINLRRNHLQEL 333

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P   G L +L  L LS+NRL+ +P+T     +L   ++    L+ LPD  +  L  +  +
Sbjct: 334 PAEFGELRDLQYLTLSFNRLQRLPDTFGNLTNLRMLDLHSNKLTRLPDSFV-KLGRLEYL 392

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG-------------------IFSR 378
           T+S N+  + P G    F  +  +N E+NQ+   P                     + + 
Sbjct: 393 TVSYNQLNSLPRGFGDHFHRLEFLNLENNQLSSPPSSEGLLMPMANEDDDGNTHSLVITP 452

Query: 379 AKNLSK---VNMKDNLLTSLPLDLGTWV-GLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
             N S    + +  N LT+ P  L  +V  L ELNL  NQIS +   I NL NL +L L 
Sbjct: 453 QSNFSSLITLRVGCNQLTTFPPGLCDYVTTLHELNLSRNQISYIPPAITNLTNLRLLYLG 512

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
            N ++ +P SIG L  L  L + +  +  LP E+  L  L+ L L+ N    LP  I  +
Sbjct: 513 VNPIEVIPRSIGVLENLYVLGIHQTFIADLPEELTLLHNLETLYLRKNAFRVLPDVIFQM 572

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
           T L  L +    + ++P EIG L NL  L L + T +  +P E+     L  + L    +
Sbjct: 573 TMLRKLDLNFIRMTNLPGEIGQLTNLEILQLRE-TMIKVLPREITNLRKLTDLDLSLNNM 631

Query: 555 SQIPSEIV 562
           + +P E++
Sbjct: 632 TTVPEEVL 639



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 169/363 (46%), Gaps = 6/363 (1%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIG-YVTNLTCLGLAENSLT 160
           N+  LDL  + +T LP S  KL  LE L +  N+L SLP   G +   L  L L  N L+
Sbjct: 365 NLRMLDLHSNKLTRLPDSFVKLGRLEYLTVSYNQLNSLPRGFGDHFHRLEFLNLENNQLS 424

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI-QYLSNLS 219
           S P S   L  +   D   N  + +       +SL  L +  N++ T  P +  Y++ L 
Sbjct: 425 SPPSSEGLLMPMANEDDDGNTHSLVITPQSNFSSLITLRVGCNQLTTFPPGLCDYVTTLH 484

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L++  N+I  +PP +  L NL  L L  N +E +P+ IG    L  L +    + ++P+
Sbjct: 485 ELNLSRNQISYIPPAITNLTNLRLLYLGVNPIEVIPRSIGVLENLYVLGIHQTFIADLPE 544

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            L  L NL  L L  N    +P+ + +   L + ++    +++LP G +  LT++  + L
Sbjct: 545 ELTLLHNLETLYLRKNAFRVLPDVIFQMTMLRKLDLNFIRMTNLP-GEIGQLTNLEILQL 603

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
                   P    T    +  ++   N +  +P  +   A NL  + +  N L +LP +L
Sbjct: 604 RETMIKVLPR-EITNLRKLTDLDLSLNNMTTVPEEVLELA-NLRTLEIMYNHLQTLPPEL 661

Query: 400 GTWVG-LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           G  +G L  L++  N+++KL   I  LV L  L LS N L  +P  +  L  LK L    
Sbjct: 662 GNKLGRLKNLDVSHNKLTKLPPSIAKLVELRQLDLSCNKLPHIPEEVLRLPHLKFLSFGY 721

Query: 459 NKL 461
           NKL
Sbjct: 722 NKL 724



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 98/177 (55%), Gaps = 1/177 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
            N+  L L K++   LP  + ++T L +L L   ++ +LP +IG +TNL  L L E  + 
Sbjct: 550 HNLETLYLRKNAFRVLPDVIFQMTMLRKLDLNFIRMTNLPGEIGQLTNLEILQLRETMIK 609

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI-QYLSNLS 219
            LP  + NL++L  LDL  N +  +P  V +L +L+ L + +N ++T+ P++   L  L 
Sbjct: 610 VLPREITNLRKLTDLDLSLNNMTTVPEEVLELANLRTLEIMYNHLQTLPPELGNKLGRLK 669

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
            L +  NK+ +LPP + +L  L  LDL+ N L  +P+E+     L  L   +N+L N
Sbjct: 670 NLDVSHNKLTKLPPSIAKLVELRQLDLSCNKLPHIPEEVLRLPHLKFLSFGYNKLTN 726


>gi|327282758|ref|XP_003226109.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Anolis
           carolinensis]
          Length = 524

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 198/390 (50%), Gaps = 28/390 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + + ++D RH  L  +P  +Y+ + SL+ L L  N+++ +      L  L  L + DN+I
Sbjct: 12  RHVELIDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPFFQLVKLRKLGLSDNEI 71

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LPPE+     LV LDL+ N + E+P+ I  C  L   D   N L  +P+    L NLT
Sbjct: 72  QRLPPEIANFMQLVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPESFPELQNLT 131

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L ++   L+++PE +    +L    +    L+ LP+ +                     
Sbjct: 132 CLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESV--------------------- 170

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                Q   +  ++  +N +  +P  I +   NL  + +  N L  LP ++G+   L  L
Sbjct: 171 ----AQLQRLEELDLGNNDLYNLPETIGA-LYNLKDLWLDGNQLAELPQEIGSLKNLLCL 225

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L E+I  L +L  L++S NLL+ LP  IG L+KL  L +++N+L  L   +
Sbjct: 226 DISENKLERLPEEISGLTSLTDLLISQNLLEVLPDGIGKLKKLSILKVDQNRLVQLTEAV 285

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + L  L+L  NQL++LP++IG L  L+ L+V  N L S+P+EIG   +L+   + DN
Sbjct: 286 GDCESLTELVLTENQLLTLPKSIGRLKKLNVLNVDRNKLVSLPKEIGGCCSLNVFSVRDN 345

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L+ IP E++  + L ++ +    L  +P
Sbjct: 346 R-LSRIPPEISQATELHVLDVAGNRLLHLP 374



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 189/406 (46%), Gaps = 28/406 (6%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +D    S+  +P  + + +  LEEL L  N+L  LP     +  L  LGL++N +  LP 
Sbjct: 17  IDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPFFQLVKLRKLGLSDNEIQRLPP 76

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            +AN  QL  LDL  N + E+P  +    SL++     N +  +      L NL+ LS+ 
Sbjct: 77  EIANFMQLVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPESFPELQNLTCLSVN 136

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           D  ++ LP  +G L NL +L+L  N L  LP+ +     L  LDL +N+L N+P+ +G L
Sbjct: 137 DISLQALPENIGNLYNLASLELRENLLTYLPESVAQLQRLEELDLGNNDLYNLPETIGAL 196

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
            NL  L L  N+L  +P+ +    +L   ++    L  LP+  +S LTS+ ++ +S+N  
Sbjct: 197 YNLKDLWLDGNQLAELPQEIGSLKNLLCLDISENKLERLPEE-ISGLTSLTDLLISQNLL 255

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
              P G                           + K LS + +  N L  L   +G    
Sbjct: 256 EVLPDG-------------------------IGKLKKLSILKVDQNRLVQLTEAVGDCES 290

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           LTEL L  NQ+  L + I  L  L VL +  N L  LP  IG    L    + +N+L  +
Sbjct: 291 LTELVLTENQLLTLPKSIGRLKKLNVLNVDRNKLVSLPKEIGGCCSLNVFSVRDNRLSRI 350

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           P EI    EL  L +  N+L+ LP ++  L  L  L + +N  Q +
Sbjct: 351 PPEISQATELHVLDVAGNRLLHLPMSLTSL-KLKALWLSDNQSQPL 395



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 128/372 (34%), Positives = 190/372 (51%), Gaps = 17/372 (4%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LDLS++ I  +P S+     L+     GN L  LP     + NLTCL + + SL +L
Sbjct: 84  LVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQAL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  V +L  L+ L L  N +  +   I  L NL  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPESVAQLQRLEELDLGNNDLYNLPETIGALYNLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  +PD +G
Sbjct: 204 LDGNQLAELPQEIGSLKNLLCLDISENKLERLPEEISGLTSLTDLLISQNLLEVLPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  + E +  C  L E  +    L +LP   +  L  +N + + RN
Sbjct: 264 KLKKLSILKVDQNRLVQLTEAVGDCESLTELVLTENQLLTLPKS-IGRLKKLNVLNVDRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG     +V+S+    N++ +IP  I S+A  L  +++  N L  LP+ L 
Sbjct: 323 KLVSLPKEIGGCCSL-NVFSV--RDNRLSRIPPEI-SQATELHVLDVAGNRLLHLPMSL- 377

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEV--LVLSNNLLKKLPSSIGNLRKL-KCLDLE 457
           T + L  L L  NQ   L    Q   + E+   +L+  LL ++PS  G    L +C    
Sbjct: 378 TSLKLKALWLSDNQSQPLL-TFQTDTDPEIGEKILTCVLLPQMPSEPGCQDNLPRC---- 432

Query: 458 ENKLESLPNEIG 469
              LESL NE+ 
Sbjct: 433 -GALESLVNEMS 443



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/331 (34%), Positives = 160/331 (48%), Gaps = 37/331 (11%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L ELPK       L  L L  NE+  +P  + N + L  L LS N + 
Sbjct: 36  RSLEELLLDANQLRELPKPFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIP 95

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQ 354
            +PE++S C  L   +  G  L+ LP+    L +LT  S+N+I+L            P  
Sbjct: 96  EIPESISFCKSLQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQ---------ALPEN 146

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
             ++Y                     NL+ + +++NLLT LP  +     L EL+LG N 
Sbjct: 147 IGNLY---------------------NLASLELRENLLTYLPESVAQLQRLEELDLGNND 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +  L E I  L NL+ L L  N L +LP  IG+L+ L CLD+ ENKLE LP EI  L  L
Sbjct: 186 LYNLPETIGALYNLKDLWLDGNQLAELPQEIGSLKNLLCLDISENKLERLPEEISGLTSL 245

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
             L++  N L  LP  IG L  LS L V +N L  + E +G  E+L  L L +N  L  +
Sbjct: 246 TDLLISQNLLEVLPDGIGKLKKLSILKVDQNRLVQLTEAVGDCESLTELVLTENQLL-TL 304

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEIVVGG 565
           P  +     L ++++D   L  +P EI  GG
Sbjct: 305 PKSIGRLKKLNVLNVDRNKLVSLPKEI--GG 333



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 123/228 (53%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +L+L ++ +T+LP SV +L  LEEL L  N L +LP  IG + NL  L L  N L  
Sbjct: 152 NLASLELRENLLTYLPESVAQLQRLEELDLGNNDLYNLPETIGALYNLKDLWLDGNQLAE 211

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + +L+ L  LD+  NKL  LP  +  LTSL  L +  N ++ +   I  L  LS+L
Sbjct: 212 LPQEIGSLKNLLCLDISENKLERLPEEISGLTSLTDLLISQNLLEVLPDGIGKLKKLSIL 271

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++ +L   +G+ ++L  L L  N L  LPK IG    L  L++  N+LV++P  +
Sbjct: 272 KVDQNRLVQLTEAVGDCESLTELVLTENQLLTLPKSIGRLKKLNVLNVDRNKLVSLPKEI 331

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
           G   +L    +  NRL  +P  +S+   L+  +V G  L  LP  L S
Sbjct: 332 GGCCSLNVFSVRDNRLSRIPPEISQATELHVLDVAGNRLLHLPMSLTS 379



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 26/116 (22%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           L + K   R K+ N+LN+D                          NKL SLP +IG   +
Sbjct: 302 LTLPKSIGRLKKLNVLNVD-------------------------RNKLVSLPKEIGGCCS 336

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR 204
           L    + +N L+ +P  ++   +L VLD+  N+L  LPM +  L  LK L+L  N+
Sbjct: 337 LNVFSVRDNRLSRIPPEISQATELHVLDVAGNRLLHLPMSLTSL-KLKALWLSDNQ 391


>gi|324509731|gb|ADY44080.1| Protein lap1, partial [Ascaris suum]
          Length = 634

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 129/382 (33%), Positives = 195/382 (51%), Gaps = 9/382 (2%)

Query: 171 QLRVLDLRHNKLNELPMVVYKLTS-LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR 229
           ++ V++ R   L+ELP  V +  S L+ LYL  N+I  +   +     L  LS+  NKI 
Sbjct: 14  RVDVIEKRQCNLHELPAEVERSASCLEELYLDCNQICEIPEGLCRCKKLRSLSLGQNKIL 73

Query: 230 ELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTR 289
            +PP +G L  L  L L  N L +LP+E+  C+ L  LDL+ N L  +PD++  L +LT 
Sbjct: 74  RVPPAIGSLIALEELHLEDNELSDLPEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTH 133

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP- 348
           L L    L  +P  + +  +L   +V    L  LP  +   L  +  + L RN+ +  P 
Sbjct: 134 LYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAI-CQLKHLRELDLGRNELSHLPL 192

Query: 349 -SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
             G       +Y    +HN +  +P  + S   +L  +++  N LT+LP ++G    L E
Sbjct: 193 NMGSLEVLEDLY---VDHNVLSAVPDSLTS-CGHLRTLDVSQNDLTALPKEIGDLEQLCE 248

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           L++  N+I+ L   I  L NL  L   +N L +L  +IG    L  L L  N+L +LP  
Sbjct: 249 LSIAENRIAALPNSIGRLKNLVTLKADSNALTELVPTIGECSSLLELYLFNNQLTTLPAT 308

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
           IG LKEL  L +  NQL  +P AIG  + LS L++  N L+ +P E+G L NL  L L D
Sbjct: 309 IGGLKELSVLSIDENQLEEIPSAIGGCSKLSILTLRGNRLRELPLEVGRLANLRVLDLCD 368

Query: 528 NTCLNNIPFELALCSNLQIMSL 549
           N  L  +PF + +  NL+ + L
Sbjct: 369 NI-LAFLPFTINVLFNLRALWL 389



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 123/386 (31%), Positives = 190/386 (49%), Gaps = 30/386 (7%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C EE  L LD ++  I  +P  + +   L  L L  NK+  +P  IG +  L  L L +N
Sbjct: 38  CLEE--LYLDCNQ--ICEIPEGLCRCKKLRSLSLGQNKILRVPPAIGSLIALEELHLEDN 93

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L+ LP+ L     L++LDLR N L  LP VV +L+SL  LYL    +  + PDI  L N
Sbjct: 94  ELSDLPEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQN 153

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +R+N++R LPP + +LK+L  LDL  N L  LP  +G+  +L  L + HN L  +
Sbjct: 154 LRSLDVRENQLRILPPAICQLKHLRELDLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAV 213

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           PD L +  +L  L +S N L ++P+ +     L E ++    +++LP+    S+  + N+
Sbjct: 214 PDSLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALPN----SIGRLKNL 269

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
              +    A     PT                           +L ++ + +N LT+LP 
Sbjct: 270 VTLKADSNALTELVPT----------------------IGECSSLLELYLFNNQLTTLPA 307

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
            +G    L+ L++  NQ+ ++   I     L +L L  N L++LP  +G L  L+ LDL 
Sbjct: 308 TIGGLKELSVLSIDENQLEEIPSAIGGCSKLSILTLRGNRLRELPLEVGRLANLRVLDLC 367

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQ 483
           +N L  LP  I  L  L+ L L  +Q
Sbjct: 368 DNILAFLPFTINVLFNLRALWLSVDQ 393



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 184/345 (53%), Gaps = 5/345 (1%)

Query: 218 LSMLSMRDNKIRELPPELGELKN-LVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           + ++  R   + ELP E+    + L  L L  N + E+P+ +  C  L +L L  N+++ 
Sbjct: 15  VDVIEKRQCNLHELPAEVERSASCLEELYLDCNQICEIPEGLCRCKKLRSLSLGQNKILR 74

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G+LI L  L L  N L  +PE L KC +L   ++    L+ LPD +++ L+S+ +
Sbjct: 75  VPPAIGSLIALEELHLEDNELSDLPEELVKCSNLKILDLRLNLLTRLPD-VVTRLSSLTH 133

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L     T  P     Q  ++ S++   NQ+  +P  I  + K+L ++++  N L+ LP
Sbjct: 134 LYLFETSLTQLPPD-IDQLQNLRSLDVRENQLRILPPAI-CQLKHLRELDLGRNELSHLP 191

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
           L++G+   L +L +  N +S + + + +  +L  L +S N L  LP  IG+L +L  L +
Sbjct: 192 LNMGSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSI 251

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
            EN++ +LPN IG LK L  L   SN L  L   IG  ++L  L +  N L ++P  IG 
Sbjct: 252 AENRIAALPNSIGRLKNLVTLKADSNALTELVPTIGECSSLLELYLFNNQLTTLPATIGG 311

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+ L  L +++N  L  IP  +  CS L I++L    L ++P E+
Sbjct: 312 LKELSVLSIDENQ-LEEIPSAIGGCSKLSILTLRGNRLRELPLEV 355



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 77/133 (57%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N++ L    +++T L P++ + + L ELYL+ N+L +LP+ IG +  L+ L + EN L 
Sbjct: 267 KNLVTLKADSNALTELVPTIGECSSLLELYLFNNQLTTLPATIGGLKELSVLSIDENQLE 326

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            +P ++    +L +L LR N+L ELP+ V +L +L++L L  N +  +   I  L NL  
Sbjct: 327 EIPSAIGGCSKLSILTLRGNRLRELPLEVGRLANLRVLDLCDNILAFLPFTINVLFNLRA 386

Query: 221 LSMRDNKIRELPP 233
           L +  ++   L P
Sbjct: 387 LWLSVDQTSPLVP 399


>gi|418701730|ref|ZP_13262652.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759294|gb|EKR25509.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 377

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/367 (33%), Positives = 188/367 (51%), Gaps = 49/367 (13%)

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L  +L N  ++RVL L   +L  LP+ + +L +L+ LYL +N++  +  +I+ L NL +L
Sbjct: 38  LTKALQNPLEVRVLILSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 97

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +R N++  LP E+ +LKNL  LDL  N L  LP+EI                       
Sbjct: 98  YLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQ--------------------- 136

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L L  NRL ++ + + +  +L   N+    L++LP+ +   L ++ ++ LS 
Sbjct: 137 --LKNLQLLYLHSNRLTTLSKDIEQLQNLKSLNLSNNQLTTLPNEI-EQLKNLKSLYLSE 193

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P                             + +NL  + + +N +T LP ++  
Sbjct: 194 NQFATFPKE-------------------------IGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L L  NQ+  L ++I+ L NL+ L LS N L  LP  +G L  L+ LDL  N+L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
           ++LP EI  LK LQ L L +NQL  LP+ IG L NL +LS+  N L ++P EI  L+NL 
Sbjct: 289 KTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQ 348

Query: 522 TLYLNDN 528
           TL L +N
Sbjct: 349 TLNLWNN 355



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/331 (33%), Positives = 181/331 (54%), Gaps = 26/331 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS+  +  LP  + +L +L+ LYL+ N+L  LP +I  + NL  L L  N LT+LP+ 
Sbjct: 51  LILSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+VLDL  N+L  LP  + +L +L++LYL  NR+ T+  DI+ L NL  L++ +
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLNLSN 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+ +LKNL +L L+ N     PKEIG    L  L L +N++  +P+ +  L 
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLK 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L LS N+L ++P+ + +                        L ++ ++ LS N+ T
Sbjct: 231 KLQYLYLSDNQLITLPKEIEQ------------------------LKNLKSLDLSYNQLT 266

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++ +++  +NQ+  +P  I  + KNL  + + +N LT LP ++G    L
Sbjct: 267 ILPKEV-GQLENLQTLDLRNNQLKTLPKEI-EQLKNLQTLFLSNNQLTILPQEIGKLKNL 324

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
             L+L  NQ++ L  +I+ L NL+ L L NN
Sbjct: 325 LWLSLVYNQLTTLPNEIEQLKNLQTLNLWNN 355



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 154/310 (49%), Gaps = 27/310 (8%)

Query: 252 EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN 311
           ++L K + N   +  L L   EL  +P  +G L NL RL L YN+L  +P+ + +  +L 
Sbjct: 36  QDLTKALQNPLEVRVLILSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQ 95

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
              +    L++LP+ +   L ++  + L  N+ T  P                       
Sbjct: 96  LLYLRSNRLTTLPNEI-EQLKNLQVLDLGSNQLTVLPQE--------------------- 133

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
                 + KNL  + +  N LT+L  D+     L  LNL  NQ++ L  +I+ L NL+ L
Sbjct: 134 ----IEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLNLSNNQLTTLPNEIEQLKNLKSL 189

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            LS N     P  IG L+ LK L L  N++  LPNEI  LK+LQ L L  NQL++LP+ I
Sbjct: 190 YLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEI 249

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
             L NL  L +  N L  +P+E+G LENL TL L +N  L  +P E+    NLQ + L N
Sbjct: 250 EQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLSN 308

Query: 552 CPLSQIPSEI 561
             L+ +P EI
Sbjct: 309 NQLTILPQEI 318



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/246 (35%), Positives = 146/246 (59%), Gaps = 1/246 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  +E+L +L+ LYL+ N+L +L   I  + NL  L L+ N LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLNLSNNQLT 174

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  L+ L+ L L  N+    P  + +L +LK+L+L  N+I  +  +I  L  L  
Sbjct: 175 TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQY 234

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + DN++  LP E+ +LKNL +LDL++N L  LPKE+G    L TLDL++N+L  +P  
Sbjct: 235 LYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +  L NL  L LS N+L  +P+ + K  +L   ++    L++LP+  +  L ++  + L 
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNE-IEQLKNLQTLNLW 353

Query: 341 RNKFTA 346
            N+F++
Sbjct: 354 NNQFSS 359



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 94/157 (59%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L+ + IT LP  + KL  L+ LYL  N+L +LP +I  + NL  L L+ N LT
Sbjct: 207 QNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLT 266

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  L+ L+ LDLR+N+L  LP  + +L +L+ L+L  N++  +  +I  L NL  
Sbjct: 267 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLW 326

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           LS+  N++  LP E+ +LKNL TL+L +N      KE
Sbjct: 327 LSLVYNQLTTLPNEIEQLKNLQTLNLWNNQFSSQEKE 363



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 8/137 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + +  LP  +E+L +L+ L L  N+L  LP ++G + NL  L L  N L +LP  
Sbjct: 235 LYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L +N+L  LP  + KL +L  L L +N++ T+  +I+ L NL  L++ +
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLNLWN 354

Query: 226 N--------KIRELPPE 234
           N        KIR+L P+
Sbjct: 355 NQFSSQEKEKIRKLLPK 371


>gi|418686455|ref|ZP_13247621.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410738888|gb|EKQ83620.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 380

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/334 (36%), Positives = 185/334 (55%), Gaps = 26/334 (7%)

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           +++L L  NR KT+  +I  L NL  L++  N++  LP E+G+LKNL  L+L  N    L
Sbjct: 48  VRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTIL 107

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           PKE+     L  L L  N+L  +P+ +G L NL  L L++N+ +++P+ + +  +L   N
Sbjct: 108 PKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLN 167

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +    L++LP+ +   L ++ ++ L  N+ TA P                 N+I ++   
Sbjct: 168 LGYNQLTALPNEI-GQLKNLQSLYLGSNQLTALP-----------------NEIGQL--- 206

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
                +NL  + +  N LT+LP ++G    L  L LG+N ++ L ++I  L NL+ L L 
Sbjct: 207 -----QNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNLLTTLPKEIGQLQNLQQLELD 261

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
            N L  LP  IG L+KL+ L L  N+L++LPNEIG LK LQRL L  NQL +LP  I  L
Sbjct: 262 YNRLYTLPKEIGRLKKLRTLSLWGNRLKTLPNEIGQLKNLQRLHLSYNQLKTLPNEIEQL 321

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            NL  L +  N L ++P+ IG L+NL  L L +N
Sbjct: 322 QNLQELDLRNNLLTTLPKGIGQLKNLQKLDLRNN 355



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/335 (35%), Positives = 177/335 (52%), Gaps = 26/335 (7%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           L L  N+  +LP +IG + NL  L L +N LT LP  +  L+ LR L+L  N+   LP  
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKE 110

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           V KL +LK LYL  N++ T+  +I  L NL +L +  N+ + +P E+G+LKNL TL+L +
Sbjct: 111 VEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGY 170

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L  LP EIG    L +L L  N+L  +P+ +G L NL  L LS NRL ++P  + +  
Sbjct: 171 NQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQ 230

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L    +    L++LP  +                          Q  ++  +  ++N++
Sbjct: 231 NLQSLYLGSNLLTTLPKEI-------------------------GQLQNLQQLELDYNRL 265

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
             +P  I  R K L  +++  N L +LP ++G    L  L+L  NQ+  L  +I+ L NL
Sbjct: 266 YTLPKEI-GRLKKLRTLSLWGNRLKTLPNEIGQLKNLQRLHLSYNQLKTLPNEIEQLQNL 324

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           + L L NNLL  LP  IG L+ L+ LDL  N+L S
Sbjct: 325 QELDLRNNLLTTLPKGIGQLKNLQKLDLRNNELFS 359



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/312 (36%), Positives = 174/312 (55%), Gaps = 4/312 (1%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            L+L+ N  + LPKEIG    L  L+L  N+L  +P  +G L NL +L L  N+   +P+
Sbjct: 50  VLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPK 109

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + K  +L E  +    L++LP+  +  L ++  + L+ N+F   P     Q  ++ ++N
Sbjct: 110 EVEKLENLKELYLGSNQLTTLPNE-IGQLKNLRVLELTHNQFKTIPK-EIGQLKNLQTLN 167

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             +NQ+  +P  I  + KNL  + +  N LT+LP ++G    L  L L TN+++ L  +I
Sbjct: 168 LGYNQLTALPNEI-GQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEI 226

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NL+ L L +NLL  LP  IG L+ L+ L+L+ N+L +LP EIG LK+L+ L L  N
Sbjct: 227 GQLQNLQSLYLGSNLLTTLPKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGN 286

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           +L +LP  IG L NL  L +  N L+++P EI  L+NL  L L +N  L  +P  +    
Sbjct: 287 RLKTLPNEIGQLKNLQRLHLSYNQLKTLPNEIEQLQNLQELDLRNN-LLTTLPKGIGQLK 345

Query: 543 NLQIMSLDNCPL 554
           NLQ + L N  L
Sbjct: 346 NLQKLDLRNNEL 357



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 173/310 (55%), Gaps = 3/310 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS +    LP  + KL +L+EL L  N+L  LP +IG + NL  L L +N  T LP  
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKE 110

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L+ L+ L L  N+L  LP  + +L +L++L L  N+ KT+  +I  L NL  L++  
Sbjct: 111 VEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGY 170

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+G+LKNL +L L  N L  LP EIG    L +L L  N L  +P+ +G L 
Sbjct: 171 NQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQ 230

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N L ++P+ + +  +L +  ++   L +LP   +  L  +  ++L  N+  
Sbjct: 231 NLQSLYLGSNLLTTLPKEIGQLQNLQQLELDYNRLYTLPKE-IGRLKKLRTLSLWGNRLK 289

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P+    Q  ++  ++  +NQ+  +P  I  + +NL ++++++NLLT+LP  +G    L
Sbjct: 290 TLPN-EIGQLKNLQRLHLSYNQLKTLPNEI-EQLQNLQELDLRNNLLTTLPKGIGQLKNL 347

Query: 406 TELNLGTNQI 415
            +L+L  N++
Sbjct: 348 QKLDLRNNEL 357



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/225 (42%), Positives = 130/225 (57%), Gaps = 3/225 (1%)

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + LS N+F   P     +  ++  +N   NQ+  +P  I  + KNL K+N+ DN  T LP
Sbjct: 51  LNLSANRFKTLPKE-IGKLKNLQELNLNKNQLTILPKEI-GQLKNLRKLNLYDNQFTILP 108

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++     L EL LG+NQ++ L  +I  L NL VL L++N  K +P  IG L+ L+ L+L
Sbjct: 109 KEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNL 168

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+L +LPNEIG LK LQ L L SNQL +LP  IG L NL  L +  N L ++P EIG 
Sbjct: 169 GYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQ 228

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+NL +LYL  N  L  +P E+    NLQ + LD   L  +P EI
Sbjct: 229 LQNLQSLYLGSN-LLTTLPKEIGQLQNLQQLELDYNRLYTLPKEI 272



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 148/267 (55%), Gaps = 1/267 (0%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  L L  + +T LP  + +L +L  L L  N+  ++P +IG + NL  L L  N 
Sbjct: 113 KLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQ 172

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP+ +  L+ L+ L L  N+L  LP  + +L +L+ LYL  NR+ T+  +I  L NL
Sbjct: 173 LTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNL 232

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L +  N +  LP E+G+L+NL  L+L +N L  LPKEIG    L TL L  N L  +P
Sbjct: 233 QSLYLGSNLLTTLPKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNRLKTLP 292

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           + +G L NL RL LSYN+L+++P  + +  +L E ++    L++LP G +  L ++  + 
Sbjct: 293 NEIGQLKNLQRLHLSYNQLKTLPNEIEQLQNLQELDLRNNLLTTLPKG-IGQLKNLQKLD 351

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEH 365
           L  N+  +   G   +      I F H
Sbjct: 352 LRNNELFSEEKGRIRKLLPKCQIYFHH 378



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 70/123 (56%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  +I N   ++ L+L  N+ ++LP EIG LK LQ L L  NQL  LP+ IG L NL 
Sbjct: 36  RDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 95

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L++ +N    +P+E+  LENL  LYL  N  L  +P E+    NL+++ L +     IP
Sbjct: 96  KLNLYDNQFTILPKEVEKLENLKELYLGSNQ-LTTLPNEIGQLKNLRVLELTHNQFKTIP 154

Query: 559 SEI 561
            EI
Sbjct: 155 KEI 157


>gi|347963067|ref|XP_311104.5| AGAP000054-PA [Anopheles gambiae str. PEST]
 gi|333467375|gb|EAA06225.6| AGAP000054-PA [Anopheles gambiae str. PEST]
          Length = 1593

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 181/364 (49%), Gaps = 50/364 (13%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N++ LD+S++ I  +P  ++ L  L+      N ++ LP+    + NLT LGL + SL S
Sbjct: 84  NLVELDVSRNEIGDIPEDIKHLRSLQIADFSSNPISRLPAGFTQLRNLTVLGLNDMSLIS 143

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP     L +L  L+LR N L  LP  + +LT L+ L L  N I  +   + YL +L  L
Sbjct: 144 LPQDFGCLSKLVSLELRENLLKNLPESISQLTKLERLDLGDNEIDELPSHVGYLPSLQEL 203

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  LPPE+G LK LV LD++ N LEELP+EIG    L  L L  N L  +P+ +
Sbjct: 204 WLDHNQLLRLPPEIGLLKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPNGI 263

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL+ L+L  NRL ++ +++  CVH+ E  +    LS LP   + ++  +NN+ + R
Sbjct: 264 SKLTNLSILKLDQNRLHTLNDSIGCCVHMQELILTENFLSELP-ATVGNMLVLNNLNVDR 322

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N   A PS                              + L  +++++N LT LP +LG 
Sbjct: 323 NSLVAVPSE-------------------------LGNCRQLGVLSLRENKLTRLPAELG- 356

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
                                 N   L VL +S NLL+ LP S+ NL +LK + L EN+ 
Sbjct: 357 ----------------------NCGELHVLDVSGNLLQHLPYSLVNL-QLKAVWLSENQS 393

Query: 462 ESLP 465
           + +P
Sbjct: 394 QPVP 397



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 197/422 (46%), Gaps = 51/422 (12%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           N+ +E  R    ++  L L  + I  LP    +L  L +L L  N +  +PS I    NL
Sbjct: 27  NVPEEIFRYSN-SLEELLLDANHIRDLPKGFFRLYRLRKLGLSDNDIIKIPSDIQNFVNL 85

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
             L ++ N +  +P+ + +L+ L++ D   N ++ LP    +L +L +L L    + ++ 
Sbjct: 86  VELDVSRNEIGDIPEDIKHLRSLQIADFSSNPISRLPAGFTQLRNLTVLGLNDMSLISLP 145

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
            D   LS L  L +R+N ++ LP  + +L  L  LDL  N ++ELP  +G    L  L L
Sbjct: 146 QDFGCLSKLVSLELRENLLKNLPESISQLTKLERLDLGDNEIDELPSHVGYLPSLQELWL 205

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
            HN+L+ +P  +G L  L  L +S NRLE +PE +     L + ++    L +LP+G +S
Sbjct: 206 DHNQLLRLPPEIGLLKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPNG-IS 264

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
            LT+++ + L +N+                                              
Sbjct: 265 KLTNLSILKLDQNR---------------------------------------------- 278

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
             L +L   +G  V + EL L  N +S+L   + N++ L  L +  N L  +PS +GN R
Sbjct: 279 --LHTLNDSIGCCVHMQELILTENFLSELPATVGNMLVLNNLNVDRNSLVAVPSELGNCR 336

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
           +L  L L ENKL  LP E+G   EL  L +  N L  LP ++ +L  L  + + EN  Q 
Sbjct: 337 QLGVLSLRENKLTRLPAELGNCGELHVLDVSGNLLQHLPYSLVNL-QLKAVWLSENQSQP 395

Query: 510 IP 511
           +P
Sbjct: 396 VP 397



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 189/381 (49%), Gaps = 8/381 (2%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH+ L  +P  +++ + SL+ L L  N I+ +      L  L  L + DN I
Sbjct: 13  RQIEYVDNRHSSLPNVPEEIFRYSNSLEELLLDANHIRDLPKGFFRLYRLRKLGLSDNDI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
            ++P ++    NLV LD++ N + ++P++I +   L   D   N +  +P     L NLT
Sbjct: 73  IKIPSDIQNFVNLVELDVSRNEIGDIPEDIKHLRSLQIADFSSNPISRLPAGFTQLRNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L S+P+       L    +    L +LP+ + S LT +  + L  N+    P
Sbjct: 133 VLGLNDMSLISLPQDFGCLSKLVSLELRENLLKNLPESI-SQLTKLERLDLGDNEIDELP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
           S       S+  +  +HNQ+ ++P  I    K L  +++ +N L  LP ++G    LT+L
Sbjct: 192 SH-VGYLPSLQELWLDHNQLLRLPPEI-GLLKKLVCLDVSENRLEELPEEIGGLECLTDL 249

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           +L  N +  L   I  L NL +L L  N L  L  SIG    ++ L L EN L  LP  +
Sbjct: 250 HLSQNLLETLPNGISKLTNLSILKLDQNRLHTLNDSIGCCVHMQELILTENFLSELPATV 309

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G +  L  L +  N LV++P  +G+   L  LS+ EN L  +P E+G    LH L ++ N
Sbjct: 310 GNMLVLNNLNVDRNSLVAVPSELGNCRQLGVLSLRENKLTRLPAELGNCGELHVLDVSGN 369

Query: 529 TCLNNIPFELALCSNLQIMSL 549
             L ++P+ L    NLQ+ ++
Sbjct: 370 -LLQHLPYSLV---NLQLKAV 386



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 175/373 (46%), Gaps = 55/373 (14%)

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGELKN-LVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           I+Y+ N      R + +  +P E+    N L  L L  NH+ +LPK       L  L L 
Sbjct: 15  IEYVDN------RHSSLPNVPEEIFRYSNSLEELLLDANHIRDLPKGFFRLYRLRKLGLS 68

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
            N+++ IP  + N +NL  L +S N +  +PE +     L   +     +S LP G    
Sbjct: 69  DNDIIKIPSDIQNFVNLVELDVSRNEIGDIPEDIKHLRSLQIADFSSNPISRLPAGF--- 125

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
            T + N+T+                  +  I+   +      +G  S+   L  + +++N
Sbjct: 126 -TQLRNLTV-------------LGLNDMSLISLPQD------FGCLSK---LVSLELREN 162

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
           LL +LP  +     L  L+LG N+I +L   +  L +L+ L L +N L +LP  IG L+K
Sbjct: 163 LLKNLPESISQLTKLERLDLGDNEIDELPSHVGYLPSLQELWLDHNQLLRLPPEIGLLKK 222

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L CLD+ EN+LE LP EIG L+ L  L L  N L +LP  I  LTNLS L + +N L ++
Sbjct: 223 LVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPNGISKLTNLSILKLDQNRLHTL 282

Query: 511 PEEIGTLENLHTLYLNDNT------------CLNN----------IPFELALCSNLQIMS 548
            + IG   ++  L L +N              LNN          +P EL  C  L ++S
Sbjct: 283 NDSIGCCVHMQELILTENFLSELPATVGNMLVLNNLNVDRNSLVAVPSELGNCRQLGVLS 342

Query: 549 LDNCPLSQIPSEI 561
           L    L+++P+E+
Sbjct: 343 LRENKLTRLPAEL 355


>gi|158286480|ref|XP_308777.4| AGAP006993-PA [Anopheles gambiae str. PEST]
 gi|157020488|gb|EAA04662.4| AGAP006993-PA [Anopheles gambiae str. PEST]
          Length = 626

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 229/510 (44%), Gaps = 80/510 (15%)

Query: 100 EENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL 159
           + ++ +LDLS +++T +  +++ L  L  L L  N L SLP+ IG +T LT   +A N L
Sbjct: 91  QRSLTSLDLSSNTLTTISENIQNLVDLTVLNLQDNALTSLPAGIGALTKLTKFSVARNKL 150

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           T LP+S   L++L+ L+L HN+  E+   +  L  L+ L + FN I  +   + +L  L 
Sbjct: 151 TELPESFFQLKELKHLNLSHNEFAEMNPNISDLIMLETLDVSFNSINALPGGVGFLVRLQ 210

Query: 220 MLSMRDNKIRELP-----------------------PELGELKNLVTLDLAHNHLEELPK 256
            L++ +N + ELP                       P +GEL+ L    + HN ++ELP 
Sbjct: 211 QLTLSNNHLTELPNDIVNLRKLQKLDLAKNDLKKLPPVMGELRRLECFYVQHNDIDELPD 270

Query: 257 EIG-----------------------NCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
             G                       N   L  LDL+ N++  +PD +  L +LTRL LS
Sbjct: 271 FTGCEALKELHISNNYIKTLPGDFCENLPQLKVLDLRDNKIEKLPDEIALLASLTRLDLS 330

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP- 352
            N + S+P  LS   HL    VEG  + S+   ++   T     TL     T  P GG  
Sbjct: 331 NNTISSLPSCLSTLAHLVSLQVEGNPIRSIRRDIIQCGTQRILKTLRERDGTGKPDGGQK 390

Query: 353 ---------------------TQFTSVYSINFEH------NQIDKIPYGIFSRA--KNLS 383
                                + F  VY +            +  IP  +F  A    + 
Sbjct: 391 GVARAAASASTAVVKNSLFTESTFPDVYQMRKGRALIVCSKALVDIPEAVFLDALEACVY 450

Query: 384 KVNMKDNLLTSLPLDLGTWVGL-TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
            V++  N LT++P  +     L TELN+  N +  +         +  L LSNN +  LP
Sbjct: 451 NVDISKNKLTAVPSGITHLSSLLTELNVSFNLLQTVPAFFSQFDKISYLNLSNNQMTDLP 510

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP---RAIGHLTNLSY 499
             +G L  L+ L++  N+L+ +P+ +  L+ L+ L+   NQ+  +      +G L  L+ 
Sbjct: 511 EVVGLLVTLRELNVISNQLKRIPDCVYELRGLEILLASGNQIEEIDATESGLGALKRLAT 570

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
           L +  NN++ +P  +GTL+N+ TL L  N+
Sbjct: 571 LDLANNNIKHVPPVLGTLKNITTLELIGNS 600



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 154/324 (47%), Gaps = 38/324 (11%)

Query: 243 TLDLAHNHLEELPKEIGNCT------MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNR 296
            L+L+   L  +P+++ N +        V  DL   E  N  +   N  +LT L LS N 
Sbjct: 47  VLNLSGKGLATVPEKVWNLSDSDENEKEVRYDL---ERTNDEESWWNQRSLTSLDLSSNT 103

Query: 297 LESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFT 356
           L ++ E +   V L   N++  AL+SLP G+  +LT +   +++RNK T  P        
Sbjct: 104 LTTISENIQNLVDLTVLNLQDNALTSLPAGI-GALTKLTKFSVARNKLTELPES------ 156

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS 416
                              F + K L  +N+  N    +  ++   + L  L++  N I+
Sbjct: 157 -------------------FFQLKELKHLNLSHNEFAEMNPNISDLIMLETLDVSFNSIN 197

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
            L   +  LV L+ L LSNN L +LP+ I NLRKL+ LDL +N L+ LP  +G L+ L+ 
Sbjct: 198 ALPGGVGFLVRLQQLTLSNNHLTELPNDIVNLRKLQKLDLAKNDLKKLPPVMGELRRLEC 257

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG-TLENLHTLYLNDNTCLNNIP 535
             +Q N +  LP   G    L  L +  N ++++P +    L  L  L L DN  +  +P
Sbjct: 258 FYVQHNDIDELPDFTG-CEALKELHISNNYIKTLPGDFCENLPQLKVLDLRDNK-IEKLP 315

Query: 536 FELALCSNLQIMSLDNCPLSQIPS 559
            E+AL ++L  + L N  +S +PS
Sbjct: 316 DEIALLASLTRLDLSNNTISSLPS 339



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 4/166 (2%)

Query: 92  EKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHL-EELYLYGNKLASLPSQIGYVTNLT 150
           E  FL   E  + N+D+SK+ +T +P  +  L+ L  EL +  N L ++P+       ++
Sbjct: 438 EAVFLDALEACVYNVDISKNKLTAVPSGITHLSSLLTELNVSFNLLQTVPAFFSQFDKIS 497

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV-- 208
            L L+ N +T LP+ +  L  LR L++  N+L  +P  VY+L  L+IL    N+I+ +  
Sbjct: 498 YLNLSNNQMTDLPEVVGLLVTLRELNVISNQLKRIPDCVYELRGLEILLASGNQIEEIDA 557

Query: 209 -HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
               +  L  L+ L + +N I+ +PP LG LKN+ TL+L  N   +
Sbjct: 558 TESGLGALKRLATLDLANNNIKHVPPVLGTLKNITTLELIGNSFRQ 603



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 27/168 (16%)

Query: 398 DLGTWV---GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           D  +W     LT L+L +N ++ +SE+IQNLV+L VL                       
Sbjct: 84  DEESWWNQRSLTSLDLSSNTLTTISENIQNLVDLTVL----------------------- 120

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           +L++N L SLP  IG L +L +  +  N+L  LP +   L  L +L++  N    +   I
Sbjct: 121 NLQDNALTSLPAGIGALTKLTKFSVARNKLTELPESFFQLKELKHLNLSHNEFAEMNPNI 180

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  L TL ++ N+ +N +P  +     LQ ++L N  L+++P++IV
Sbjct: 181 SDLIMLETLDVSFNS-INALPGGVGFLVRLQQLTLSNNHLTELPNDIV 227


>gi|260809195|ref|XP_002599392.1| hypothetical protein BRAFLDRAFT_64248 [Branchiostoma floridae]
 gi|229284669|gb|EEN55404.1| hypothetical protein BRAFLDRAFT_64248 [Branchiostoma floridae]
          Length = 642

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 149/500 (29%), Positives = 227/500 (45%), Gaps = 54/500 (10%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGY-VTNLTCLGLAEN 157
           KEEN   L L    +   P SV  LTH+++L L  N L SLP ++ + +T+L  L +  N
Sbjct: 39  KEENHF-LCLKSLDLCSFPESVLNLTHVQKLVLDHNSLTSLPGELCHTLTHLRVLSVMGN 97

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L +LP    NL  LR L    N L ELP     L  L++LYL  N ++T+  D   L +
Sbjct: 98  DLETLPTLFGNLTLLRELHAGENCLQELPDSFSDLKELRLLYLTGNELRTLPSDFGRLEH 157

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L + +N ++ LP   G L+ L   D ++N LE LP+  G  + L  L+L  N+L  +
Sbjct: 158 LETLMVDENHLKTLPKTFGSLRRLERFDASNNKLETLPESFGGLSRLKILNLSTNKLSCL 217

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P+  G+L  L  + LS N L  + + L     L +  V+   L  LP   +  L+ I  +
Sbjct: 218 PESFGDLPQLQEVELSGNSLSFLTKDLKSSHCLRKLYVDNNVLKELPP-WVGHLSLIQEL 276

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR-AKNLSKVNMKDNLLTSLP 396
           +L  NK    P                      +P    +R  + L  +++  N +T+LP
Sbjct: 277 SLRDNKLMNQP----------------------LPESFPARSGQTLRLLDLSGNFITALP 314

Query: 397 LDLGTWVGLTELNLGT-------------NQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
             LG    L  L+LG+             N +  L E+   L +L++L L  N L  LP 
Sbjct: 315 ASLGQLGSLESLHLGSAIGELERRHFQNGNWLCALPENFGRLRHLKMLHLDENQLTHLPD 374

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
           S G+L  L+ LD+ +N L+ LP+    L  LQ           LP   G L++L  L + 
Sbjct: 375 SFGSLGSLEFLDVGQNWLKELPDSFCELSNLQL----------LPSNFGRLSSLVDLRLD 424

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV- 562
            N L  +PE    L  L TL L  N  L  +P  L   + +  + +D    S +P E+V 
Sbjct: 425 NNMLGELPESFAELRQLRTLDLFCNE-LREVPGALKHLTGITRLDMDKNKFS-LPPELVP 482

Query: 563 --VGGPSLIIRYLKMQGPYR 580
             +  P+   R  +++  +R
Sbjct: 483 NIIFKPTYAARDPRLKDTWR 502



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 121/246 (49%), Gaps = 10/246 (4%)

Query: 331 LTSINNITLSRNKFTAYPSGGPTQF-------TSVYSINFEHNQIDKIPYGIFSRAKNLS 383
           L+  NN+    N F    S     F       T V  +  +HN +  +P  +     +L 
Sbjct: 31  LSPSNNVEKEENHFLCLKSLDLCSFPESVLNLTHVQKLVLDHNSLTSLPGELCHTLTHLR 90

Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
            +++  N L +LP   G    L EL+ G N + +L +   +L  L +L L+ N L+ LPS
Sbjct: 91  VLSVMGNDLETLPTLFGNLTLLRELHAGENCLQELPDSFSDLKELRLLYLTGNELRTLPS 150

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
             G L  L+ L ++EN L++LP   G L+ L+R    +N+L +LP + G L+ L  L++ 
Sbjct: 151 DFGRLEHLETLMVDENHLKTLPKTFGSLRRLERFDASNNKLETLPESFGGLSRLKILNLS 210

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVV 563
            N L  +PE  G L  L  + L+ N+ L+ +  +L     L+ + +DN  L ++P    V
Sbjct: 211 TNKLSCLPESFGDLPQLQEVELSGNS-LSFLTKDLKSSHCLRKLYVDNNVLKELPP--WV 267

Query: 564 GGPSLI 569
           G  SLI
Sbjct: 268 GHLSLI 273



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 127/263 (48%), Gaps = 4/263 (1%)

Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           L S P+ +L+ LT +  + L  N  T+ P       T +  ++   N ++ +P  +F   
Sbjct: 52  LCSFPESVLN-LTHVQKLVLDHNSLTSLPGELCHTLTHLRVLSVMGNDLETLPT-LFGNL 109

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
             L +++  +N L  LP        L  L L  N++  L  D   L +LE L++  N LK
Sbjct: 110 TLLRELHAGENCLQELPDSFSDLKELRLLYLTGNELRTLPSDFGRLEHLETLMVDENHLK 169

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
            LP + G+LR+L+  D   NKLE+LP   G L  L+ L L +N+L  LP + G L  L  
Sbjct: 170 TLPKTFGSLRRLERFDASNNKLETLPESFGGLSRLKILNLSTNKLSCLPESFGDLPQLQE 229

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL-DNCPLSQIP 558
           + +  N+L  + +++ +   L  LY+ DN  L  +P  +   S +Q +SL DN  ++Q  
Sbjct: 230 VELSGNSLSFLTKDLKSSHCLRKLYV-DNNVLKELPPWVGHLSLIQELSLRDNKLMNQPL 288

Query: 559 SEIVVGGPSLIIRYLKMQGPYRT 581
            E         +R L + G + T
Sbjct: 289 PESFPARSGQTLRLLDLSGNFIT 311


>gi|359726824|ref|ZP_09265520.1| leucine-rich repeat-containing protein [Leptospira weilii str.
           2006001855]
          Length = 348

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/320 (35%), Positives = 169/320 (52%), Gaps = 3/320 (0%)

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
           +   +Q  S + +L +   ++  LP E+G  +NL  L L  N L  +PKEIG    L TL
Sbjct: 9   LEKSLQNPSEVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETL 68

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
            L  N L  IP+ +  L NL  L L  N+L+ +P  + K  +L E N+ G  L+ LP  +
Sbjct: 69  ILAENRLKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQLTVLPPSI 128

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
              L ++  + L RN+    P        S+  +N   N+I  +P  I S+  NL  +++
Sbjct: 129 -GQLQNLEILELFRNQLATLPEE-IVGLKSLQILNLFENEIKSLPKEI-SQLSNLIWLDL 185

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
             N +  L LD      L  LNL  N++     DI  L +LE L L+ N  K LP  I  
Sbjct: 186 GKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQ 245

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           L  L+ L+L  N+L SLP  IG L++L+ L L+ N+L +LP+ I HL +L  + + +N L
Sbjct: 246 LENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIEHLRSLKIVHLEQNRL 305

Query: 508 QSIPEEIGTLENLHTLYLND 527
            +IPEEIG+L+NL  LYL D
Sbjct: 306 TAIPEEIGSLQNLKELYLQD 325



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 168/305 (55%), Gaps = 3/305 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD+S   +  LP  +    +LE+L L+GN+L ++P +IG + NL  L LAEN L ++P+ 
Sbjct: 22  LDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETLILAENRLKTIPNE 81

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L  LDL  NKL  LP  + KL +LK L L  N++  + P I  L NL +L +  
Sbjct: 82  IEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELFR 141

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+  LK+L  L+L  N ++ LPKEI   + L+ LDL  N++  +      L 
Sbjct: 142 NQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQ 201

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+LE+ P  + +   L   N+       LP+ +L  L ++  + L+ N+ T
Sbjct: 202 NLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEIL-QLENLQVLELTGNQLT 260

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P  G  +   + S+  E N++  +P GI    ++L  V+++ N LT++P ++G+   L
Sbjct: 261 SLPE-GIGRLEKLESLFLEGNRLTTLPKGI-EHLRSLKIVHLEQNRLTAIPEEIGSLQNL 318

Query: 406 TELNL 410
            EL L
Sbjct: 319 KELYL 323



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 97/264 (36%), Positives = 146/264 (55%), Gaps = 3/264 (1%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L L+++ +  +P  +E+L +L  L LY NKL  LP++IG + NL  L L+ N LT 
Sbjct: 64  NLETLILAENRLKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQLTV 123

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP S+  LQ L +L+L  N+L  LP  +  L SL+IL L  N IK++  +I  LSNL  L
Sbjct: 124 LPPSIGQLQNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWL 183

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  NKI+ L  +   L+NL +L+L  N LE  P +I     L  L+L +N    +P+ +
Sbjct: 184 DLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEI 243

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L L+ N+L S+PE + +   L    +EG  L++LP G +  L S+  + L +
Sbjct: 244 LQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKG-IEHLRSLKIVHLEQ 302

Query: 342 NKFTAYPS--GGPTQFTSVYSINF 363
           N+ TA P   G       +Y  +F
Sbjct: 303 NRLTAIPEEIGSLQNLKELYLQDF 326



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 132/225 (58%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL ++ +  LP  + KL +L+EL L GN+L  LP  IG + NL  L L  N L 
Sbjct: 86  QNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQLA 145

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  L+ L++L+L  N++  LP  + +L++L  L L  N+IK +  D + L NL  
Sbjct: 146 TLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKS 205

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++ DNK+   P ++ +LK+L  L+L +N  + LP+EI     L  L+L  N+L ++P+ 
Sbjct: 206 LNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEG 265

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
           +G L  L  L L  NRL ++P+ +     L   ++E   L+++P+
Sbjct: 266 IGRLEKLESLFLEGNRLTTLPKGIEHLRSLKIVHLEQNRLTAIPE 310



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 128/221 (57%), Gaps = 5/221 (2%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  L+LS + +T LPPS+ +L +LE L L+ N+LA+LP +I  + +L  L L EN 
Sbjct: 107 KLENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQLATLPEEIVGLKSLQILNLFENE 166

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           + SLP  ++ L  L  LDL  NK+  L +   +L +LK L L  N+++    DI  L +L
Sbjct: 167 IKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSL 226

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++  N+ + LP E+ +L+NL  L+L  N L  LP+ IG    L +L L+ N L  +P
Sbjct: 227 EFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLP 286

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLS-----KCVHLNEFN 314
             + +L +L  + L  NRL ++PE +      K ++L +FN
Sbjct: 287 KGIEHLRSLKIVHLEQNRLTAIPEEIGSLQNLKELYLQDFN 327



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 154/314 (49%), Gaps = 30/314 (9%)

Query: 248 HNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKC 307
           HN+LE   K + N + +  LD+   EL  +P+ +G   NL +L L  NRL ++P+ + K 
Sbjct: 6   HNNLE---KSLQNPSEVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKL 62

Query: 308 VHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQ 367
            +L    +    L ++P+ +   L ++  + L  NK    P                 N+
Sbjct: 63  RNLETLILAENRLKTIPNEI-EQLQNLATLDLYENKLKVLP-----------------NE 104

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
           I K+        +NL ++N+  N LT LP  +G    L  L L  NQ++ L E+I  L +
Sbjct: 105 IGKL--------ENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQLATLPEEIVGLKS 156

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           L++L L  N +K LP  I  L  L  LDL +NK++ L  +   L+ L+ L L  N+L + 
Sbjct: 157 LQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENF 216

Query: 488 PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIM 547
           P  I  L +L +L++  N  + +PEEI  LENL  L L  N  L ++P  +     L+ +
Sbjct: 217 PADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQ-LTSLPEGIGRLEKLESL 275

Query: 548 SLDNCPLSQIPSEI 561
            L+   L+ +P  I
Sbjct: 276 FLEGNRLTTLPKGI 289



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 9/143 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L+L  + + + P  + +L  LE L L  N+   LP +I  + NL  L L  N LT
Sbjct: 201 QNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLT 260

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP+ +  L++L  L L  N+L  LP  +  L SLKI++L  NR+  +  +I  L NL  
Sbjct: 261 SLPEGIGRLEKLESLFLEGNRLTTLPKGIEHLRSLKIVHLEQNRLTAIPEEIGSLQNLKE 320

Query: 221 LSMRD---------NKIRELPPE 234
           L ++D          KIR+L P+
Sbjct: 321 LYLQDFNSFSEKEKEKIRKLLPK 343


>gi|170029739|ref|XP_001842749.1| leucine-rich repeat-containing protein 40 [Culex quinquefasciatus]
 gi|167864068|gb|EDS27451.1| leucine-rich repeat-containing protein 40 [Culex quinquefasciatus]
          Length = 612

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 232/514 (45%), Gaps = 104/514 (20%)

Query: 100 EENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL 159
           ++++  LDLS +++T +  +V+ L  L  L L  N L +LP  IG +T LT L L  N L
Sbjct: 93  QKSLTTLDLSSNTLTSISENVKNLGDLTVLNLQDNALTALPEGIGCLTKLTKLSLGRNKL 152

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           + LP+S  NL++L+ L+L HN   E+   V  L  L++L + FN + ++   I +L  L 
Sbjct: 153 SELPESFFNLRELKSLNLSHNDFAEIHANVSDLIMLEVLDISFNSLNSLPGGIGFLVRLQ 212

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L++ +N++ ELP ++  L+NL  LDLA N L+ LP  +G    L  L +QHN++  +PD
Sbjct: 213 QLTLNNNRLTELPNDIVNLRNLHKLDLAKNDLKLLPPVMGELRKLECLYVQHNDVGELPD 272

Query: 280 MLG----------------------------------------------NLINLTRLRLS 293
             G                                               L +LTRL LS
Sbjct: 273 FTGCDALKELHISNNFIKSIPADFCENLPQLKILDLRDNKIEKLPDEISMLASLTRLDLS 332

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSL--------PDGLLSSLTSINNITLSRNKF- 344
            N + S+P  LS   HL    V+G  + S+           +L +L   +    S  K  
Sbjct: 333 NNSISSLPSCLSTLAHLVSLQVDGNPIRSIRRDIIQCGTQRILKTLKDRDGPGKSSEKVR 392

Query: 345 -----TAYPS------------------GGPTQF------TSVYSINFEHNQIDKIPYGI 375
                + +P                     P Q        SVY+I+   N++ +IP G+
Sbjct: 393 VPFEESTFPDVYQMKKGRSMIVSNKNLIDIPEQVFLDAMEASVYNIDISKNKLMEIPAGL 452

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
              A  ++++N+  N L ++P+    +  ++ LN+  NQ++ L E +  LV L  L ++N
Sbjct: 453 THLASIMTELNVSFNALKTIPMFFSQFERISYLNVSNNQLTDLPEVVGLLVTLRELNVAN 512

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N LK++P  +  L+ L+ L    NK+E                    +L +    +G L 
Sbjct: 513 NQLKQIPPCVYELKGLEILLARGNKIE--------------------ELDASEHGLGALP 552

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            L+ L V  NN++ +P  +G L+N+ TL +  N 
Sbjct: 553 RLATLDVANNNIKQVPPILGMLKNITTLEIIGNA 586



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 196/437 (44%), Gaps = 47/437 (10%)

Query: 164 DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           DS  N + L  LDL  N L  +   V  L  L +L L+ N +  +   I  L+ L+ LS+
Sbjct: 88  DSWWNQKSLTTLDLSSNTLTSISENVKNLGDLTVLNLQDNALTALPEGIGCLTKLTKLSL 147

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
             NK+ ELP     L+ L +L+L+HN   E+   + +  ML  LD+  N L ++P  +G 
Sbjct: 148 GRNKLSELPESFFNLRELKSLNLSHNDFAEIHANVSDLIMLEVLDISFNSLNSLPGGIGF 207

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L+ L +L L+ NRL  +P  +    +L++ ++    L  LP  ++  L  +  + +  N 
Sbjct: 208 LVRLQQLTLNNNRLTELPNDIVNLRNLHKLDLAKNDLKLLP-PVMGELRKLECLYVQHND 266

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
               P    T   ++  ++  +N I  IP         L  ++++DN +  LP ++    
Sbjct: 267 VGELPDF--TGCDALKELHISNNFIKSIPADFCENLPQLKILDLRDNKIEKLPDEISMLA 324

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI---GNLRKLKCLD----- 455
            LT L+L  N IS L   +  L +L  L +  N ++ +   I   G  R LK L      
Sbjct: 325 SLTRLDLSNNSISSLPSCLSTLAHLVSLQVDGNPIRSIRRDIIQCGTQRILKTLKDRDGP 384

Query: 456 ----------LEEN-------------------KLESLPNEIGFLKELQRLI----LQSN 482
                      EE+                    L  +P ++ FL  ++  +    +  N
Sbjct: 385 GKSSEKVRVPFEESTFPDVYQMKKGRSMIVSNKNLIDIPEQV-FLDAMEASVYNIDISKN 443

Query: 483 QLVSLPRAIGHLTN-LSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           +L+ +P  + HL + ++ L+V  N L++IP      E +  L +++N  L ++P  + L 
Sbjct: 444 KLMEIPAGLTHLASIMTELNVSFNALKTIPMFFSQFERISYLNVSNNQ-LTDLPEVVGLL 502

Query: 542 SNLQIMSLDNCPLSQIP 558
             L+ +++ N  L QIP
Sbjct: 503 VTLRELNVANNQLKQIP 519



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 94/169 (55%), Gaps = 10/169 (5%)

Query: 92  EKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLE----ELYLYGNKLASLPSQIGYVT 147
           E+ FL   E ++ N+D+SK+ +  +P     LTHL     EL +  N L ++P       
Sbjct: 424 EQVFLDAMEASVYNIDISKNKLMEIPAG---LTHLASIMTELNVSFNALKTIPMFFSQFE 480

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
            ++ L ++ N LT LP+ +  L  LR L++ +N+L ++P  VY+L  L+IL  R N+I+ 
Sbjct: 481 RISYLNVSNNQLTDLPEVVGLLVTLRELNVANNQLKQIPPCVYELKGLEILLARGNKIEE 540

Query: 208 VHPD---IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           +      +  L  L+ L + +N I+++PP LG LKN+ TL++  N   +
Sbjct: 541 LDASEHGLGALPRLATLDVANNNIKQVPPILGMLKNITTLEIIGNAFRQ 589



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 78/139 (56%), Gaps = 1/139 (0%)

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           N  +L  L LS+N L  +  ++ NL  L  L+L++N L +LP  IG L +L +L L  N+
Sbjct: 92  NQKSLTTLDLSSNTLTSISENVKNLGDLTVLNLQDNALTALPEGIGCLTKLTKLSLGRNK 151

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
           L  LP +  +L  L  L++  N+   I   +  L  L  L ++ N+ LN++P  +     
Sbjct: 152 LSELPESFFNLRELKSLNLSHNDFAEIHANVSDLIMLEVLDISFNS-LNSLPGGIGFLVR 210

Query: 544 LQIMSLDNCPLSQIPSEIV 562
           LQ ++L+N  L+++P++IV
Sbjct: 211 LQQLTLNNNRLTELPNDIV 229


>gi|418753822|ref|ZP_13310061.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
 gi|409965822|gb|EKO33680.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
          Length = 326

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/311 (37%), Positives = 182/311 (58%), Gaps = 3/311 (0%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G L+ L TLDLA N L+ LPKEI     L  L L +NEL  +P  
Sbjct: 1   LDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKE 60

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +GNL NL  L L+ N+  ++PE +     L + ++    L++LP  +  +L ++  + L+
Sbjct: 61  IGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEI-GNLQNLQELNLN 119

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+FT  P         + +++  ++++  +P  I  + + L K+N+  N L +LP ++G
Sbjct: 120 SNQFTTLPEE-IGNLQKLQTLDLNYSRLTTLPKEI-GKLQKLQKLNLYKNQLKTLPKEIG 177

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L  L+L  N+++ L ++I NL NL+ L L +N L  LP  IGNL+KL+ L L  N+
Sbjct: 178 KLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEKIGNLQKLQELSLAGNR 237

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L++LP EIG L+ LQ L L +NQL +LP+ I +L +L  L++  N+L S PEEIG L+ L
Sbjct: 238 LKTLPKEIGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSLISFPEEIGKLQKL 297

Query: 521 HTLYLNDNTCL 531
             LYL  N  L
Sbjct: 298 KWLYLGGNPFL 308



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 127/219 (57%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL+++ +  LP  +EKL  LE L+L  N+L +LP +IG + NL  L L  N  T+LP+ 
Sbjct: 24  LDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEE 83

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + NLQ+L+ L L H++L  LP  +  L +L+ L L  N+  T+  +I  L  L  L +  
Sbjct: 84  IGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNY 143

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           +++  LP E+G+L+ L  L+L  N L+ LPKEIG    L  L L  NEL  +P  +GNL 
Sbjct: 144 SRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQ 203

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
           NL  L L  N+L ++PE +     L E ++ G  L +LP
Sbjct: 204 NLQELSLGSNQLTTLPEKIGNLQKLQELSLAGNRLKTLP 242



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 150/273 (54%), Gaps = 27/273 (9%)

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           LDL HN L  +P  +GNL  L  L L+ N+L+++P+ + K   L   ++    L++LP  
Sbjct: 1   LDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKE 60

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
            + +L ++  + L+ N+FT  P                               + L K++
Sbjct: 61  -IGNLQNLQELNLNSNQFTTLPEE-------------------------IGNLQKLQKLS 94

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           +  + LT+LP ++G    L ELNL +NQ + L E+I NL  L+ L L+ + L  LP  IG
Sbjct: 95  LAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIG 154

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            L+KL+ L+L +N+L++LP EIG L+ L+ L L  N+L +LP+ IG+L NL  LS+G N 
Sbjct: 155 KLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQ 214

Query: 507 LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
           L ++PE+IG L+ L  L L  N  L  +P E+ 
Sbjct: 215 LTTLPEKIGNLQKLQELSLAGNR-LKTLPKEIG 246



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/243 (35%), Positives = 134/243 (55%), Gaps = 1/243 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS + +T LP  +  L  L+ L L  N+L +LP +I  +  L  L L  N LT+LP  
Sbjct: 1   LDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKE 60

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + NLQ L+ L+L  N+   LP  +  L  L+ L L  +R+ T+  +I  L NL  L++  
Sbjct: 61  IGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNS 120

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+   LP E+G L+ L TLDL ++ L  LPKEIG    L  L+L  N+L  +P  +G L 
Sbjct: 121 NQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQ 180

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L+ N L ++P+ +    +L E ++    L++LP+  + +L  +  ++L+ N+  
Sbjct: 181 NLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEK-IGNLQKLQELSLAGNRLK 239

Query: 346 AYP 348
             P
Sbjct: 240 TLP 242



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 142/272 (52%), Gaps = 27/272 (9%)

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS 349
           L LS+NRL ++P+ +     L   ++    L +LP  +   L  +  + L  N+ T  P 
Sbjct: 1   LDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEI-EKLQKLEALHLGNNELTTLPK 59

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
                                         +NL ++N+  N  T+LP ++G    L +L+
Sbjct: 60  E-------------------------IGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLS 94

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           L  ++++ L ++I NL NL+ L L++N    LP  IGNL+KL+ LDL  ++L +LP EIG
Sbjct: 95  LAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIG 154

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            L++LQ+L L  NQL +LP+ IG L NL  LS+  N L ++P+EIG L+NL  L L  N 
Sbjct: 155 KLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQ 214

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L  +P ++     LQ +SL    L  +P EI
Sbjct: 215 -LTTLPEKIGNLQKLQELSLAGNRLKTLPKEI 245



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/225 (38%), Positives = 131/225 (58%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L+ +  T LP  +  L  L++L L  ++L +LP +IG + NL  L L  N  T
Sbjct: 65  QNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFT 124

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ + NLQ+L+ LDL +++L  LP  + KL  L+ L L  N++KT+  +I  L NL  
Sbjct: 125 TLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKN 184

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+  N++  LP E+G L+NL  L L  N L  LP++IGN   L  L L  N L  +P  
Sbjct: 185 LSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEKIGNLQKLQELSLAGNRLKTLPKE 244

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
           +GNL NL  L L+ N+L ++P+ +     L   N+ G +L S P+
Sbjct: 245 IGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSLISFPE 289



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 86/144 (59%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+L K+ +  LP  + KL +L+ L L GN+L +LP +IG + NL  L L  N LT+LP+ 
Sbjct: 162 LNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEK 221

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + NLQ+L+ L L  N+L  LP  +  L +L+ L L  N++ T+  +I+ L +L  L++  
Sbjct: 222 IGNLQKLQELSLAGNRLKTLPKEIGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSG 281

Query: 226 NKIRELPPELGELKNLVTLDLAHN 249
           N +   P E+G+L+ L  L L  N
Sbjct: 282 NSLISFPEEIGKLQKLKWLYLGGN 305


>gi|344289124|ref|XP_003416295.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Loxodonta africana]
          Length = 560

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 142/468 (30%), Positives = 225/468 (48%), Gaps = 34/468 (7%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL--TSLPDSLANLQ 170
           I  +P  ++ L ++  LYL  NKL +L  ++G +  L  L L+ N L  +S+P  +++++
Sbjct: 60  IAVIPQDIQHLKNIRILYLNKNKLRNLCPELGKLARLKGLDLSNNPLLFSSIP-VISHIR 118

Query: 171 QLRVLDLRHNKLNELPMVVYK-LTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR 229
            LR L L    L E P+V+ K L  L++L L  N +K++  +I   + L  + ++ NK  
Sbjct: 119 TLRELRLYKIYLREFPIVICKSLHHLELLGLSGNLLKSLPQEIVNQTKLREIYLKQNKFE 178

Query: 230 ELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTR 289
             P EL  L NL  +DL  N L  +P+EIGN TML    + +N++  IPD L +   L+ 
Sbjct: 179 VFPQELCVLYNLEIIDLDENKLNSIPEEIGNLTMLQKFYVAYNKVPFIPDSLYHCSKLSV 238

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS 349
           L  S+N L  +P TL++   + E  + G  L  +P  L+   TS+  + L RN       
Sbjct: 239 LDFSHNLLYCIPHTLTELTEMTEIGLSGNQLEKVPR-LICKWTSLQLLYL-RNTGLRSLR 296

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
               +  ++  ++   N ++  P  + +  KNL  + + DN +  LP ++G+   L  L 
Sbjct: 297 RSFRRLVNLRFLDLSQNHLEHCPLQVCA-LKNLEILALDDNKIRQLPPEIGSLSKLKILG 355

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNL---LKKLPSSIGNLRKLKCLDLEENKLESLPN 466
           L  NQ     E+I +L +LE L L  +       +P  I  L++LK L +E N LE LP 
Sbjct: 356 LTGNQFFSFPEEIFSLASLERLYLGQDQGVKFTTVPECISKLQRLKELHIENNHLEYLPE 415

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            +G L  L+ L    N L  LP AI     L  L + +N L  +PE + +L N+  L L 
Sbjct: 416 SLGLLPNLEILDCCHNLLRQLPDAICKAQALKELLLEDNLLTHLPENLDSLVNISALTLM 475

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
           +N                        P+ + P E+   G   I RYLK
Sbjct: 476 EN------------------------PMVEPPVEVCTEGIEAIWRYLK 499



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 163/321 (50%), Gaps = 33/321 (10%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+  +DL ++ +  +P  +  LT L++ Y+  NK+  +P  + + + L+ L  + N
Sbjct: 185 CVLYNLEIIDLDENKLNSIPEEIGNLTMLQKFYVAYNKVPFIPDSLYHCSKLSVLDFSHN 244

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L  +P +L  L ++  + L  N+L ++P ++ K TSL++LYLR   ++++    + L N
Sbjct: 245 LLYCIPHTLTELTEMTEIGLSGNQLEKVPRLICKWTSLQLLYLRNTGLRSLRRSFRRLVN 304

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N +   P ++  LKNL  L L  N + +LP EIG+ + L  L L  N+  + 
Sbjct: 305 LRFLDLSQNHLEHCPLQVCALKNLEILALDDNKIRQLPPEIGSLSKLKILGLTGNQFFSF 364

Query: 278 PDMLGNLINLTRLRLSYN---RLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLT 332
           P+ + +L +L RL L  +   +  +VPE +SK   L E ++E   L  LP+  GLL +L 
Sbjct: 365 PEEIFSLASLERLYLGQDQGVKFTTVPECISKLQRLKELHIENNHLEYLPESLGLLPNLE 424

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            ++                             HN + ++P  I  +A+ L ++ ++DNLL
Sbjct: 425 ILDCC---------------------------HNLLRQLPDAI-CKAQALKELLLEDNLL 456

Query: 393 TSLPLDLGTWVGLTELNLGTN 413
           T LP +L + V ++ L L  N
Sbjct: 457 THLPENLDSLVNISALTLMEN 477



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 180/389 (46%), Gaps = 36/389 (9%)

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHL--EELPKEIGN 260
           N I  +  DIQ+L N+ +L +  NK+R L PELG+L  L  LDL++N L    +P  I +
Sbjct: 58  NDIAVIPQDIQHLKNIRILYLNKNKLRNLCPELGKLARLKGLDLSNNPLLFSSIPV-ISH 116

Query: 261 CTMLVTLDLQHNELVNIPDML-GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA 319
              L  L L    L   P ++  +L +L  L LS N L+S+P+ +     L E  ++   
Sbjct: 117 IRTLRELRLYKIYLREFPIVICKSLHHLELLGLSGNLLKSLPQEIVNQTKLREIYLKQNK 176

Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFS 377
               P  L   L ++  I L  NK  + P   G  T     Y     +N++  IP  ++ 
Sbjct: 177 FEVFPQEL-CVLYNLEIIDLDENKLNSIPEEIGNLTMLQKFY---VAYNKVPFIPDSLYH 232

Query: 378 RAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL 437
            +K LS ++   NLL  +P  L     +TE+ L  NQ+ K+   I    +L++L L N  
Sbjct: 233 CSK-LSVLDFSHNLLYCIPHTLTELTEMTEIGLSGNQLEKVPRLICKWTSLQLLYLRNTG 291

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L+ L  S   L  L+ LDL +N LE  P ++  LK L+ L L  N++  LP  IG L+ L
Sbjct: 292 LRSLRRSFRRLVNLRFLDLSQNHLEHCPLQVCALKNLEILALDDNKIRQLPPEIGSLSKL 351

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLN-------------------------DNTCLN 532
             L +  N   S PEEI +L +L  LYL                          +N  L 
Sbjct: 352 KILGLTGNQFFSFPEEIFSLASLERLYLGQDQGVKFTTVPECISKLQRLKELHIENNHLE 411

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            +P  L L  NL+I+   +  L Q+P  I
Sbjct: 412 YLPESLGLLPNLEILDCCHNLLRQLPDAI 440


>gi|405958685|gb|EKC24790.1| Protein LAP2 [Crassostrea gigas]
          Length = 702

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 143/444 (32%), Positives = 214/444 (48%), Gaps = 29/444 (6%)

Query: 102 NILNLDLSKSSITHLPPSV-EKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +I  L L  + I  LP S  E   +L+ L L GN LA LP  IG ++ L  L + EN+L 
Sbjct: 40  DITKLVLDFNDIKELPASFGEVCINLQVLSLVGNILAELPPSIGNLSQLKELHVNENNLK 99

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LPDSL +L  L VL L  N+L  LP    ++  LKI Y   NR+  +   +  LS L +
Sbjct: 100 ILPDSLCHLYDLEVLKLTGNQLQVLPDDFGEIRCLKIFYCDENRLVKLPLTLGLLSKLQV 159

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           + + DN +  +   +G+L++L   ++++N LE++    G+   L  +DL  N + N+PD 
Sbjct: 160 MELEDNSLVVIQEGIGQLRSLKIFNVSNNKLEKIHDSFGDLENLEVVDLSGNHMENLPDH 219

Query: 281 LGNLINLTRLRLSYNRLESVP-------ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
             +   + +     N+L  VP       E L   +  N+F+   CALS       S LT 
Sbjct: 220 FNSAHCVLKFYADRNKLTDVPLWLADMREALEISMSDNQFS--KCALSEKMGSTCSKLTL 277

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD-NLL 392
           ++      ++        P  F S+       N I  +  G  S    L +   ++ N L
Sbjct: 278 LDMGGNFMDRL-------PDSFGSM-------NNIRTLKLG--SCIGELERRAFQNGNWL 321

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
           T LP        L+ L L  N + +L E+  NLVNLE L L  N L +LP S   L+ LK
Sbjct: 322 TYLPESFCDLTKLSALYLDENLLQELPENFGNLVNLEFLDLGQNALHELPDSFCKLKSLK 381

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
              L +NK++ LP+E G L  L+ L L +N L  LP++   LT L  L +  N L  IP+
Sbjct: 382 VCQLSKNKIQILPSEFGDLSALEDLRLDNNLLEELPQSFNKLTGLKSLDLFNNKLTEIPD 441

Query: 513 EIGTLENLHTLYLNDNTCLNNIPF 536
            +   + L  L L++N    NIP+
Sbjct: 442 ALNNFKQLVRLDLSENRF--NIPW 463



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 200/462 (43%), Gaps = 43/462 (9%)

Query: 106 LDLSKSSITHLPPSVEKLT--HLEELYLYGNKLASLPSQIGYVT-NLTCLGLAENSLTSL 162
           LDLS   +  +PP +       + +L L  N +  LP+  G V  NL  L L  N L  L
Sbjct: 19  LDLSSKDLYRVPPQIVNGIGPDITKLVLDFNDIKELPASFGEVCINLQVLSLVGNILAEL 78

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P S+ NL QL+ L +  N L  LP  +  L  L++L L  N+++ +  D   +  L +  
Sbjct: 79  PPSIGNLSQLKELHVNENNLKILPDSLCHLYDLEVLKLTGNQLQVLPDDFGEIRCLKIFY 138

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
             +N++ +LP  LG L  L  ++L  N L  + + IG    L   ++ +N+L  I D  G
Sbjct: 139 CDENRLVKLPLTLGLLSKLQVMELEDNSLVVIQEGIGQLRSLKIFNVSNNKLEKIHDSFG 198

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
           +L NL  + LS N +E++P+          FN   C L    D               RN
Sbjct: 199 DLENLEVVDLSGNHMENLPD---------HFNSAHCVLKFYAD---------------RN 234

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG--IFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K T  P            I+   NQ  K      + S    L+ ++M  N +  LP   G
Sbjct: 235 KLTDVPLW-LADMREALEISMSDNQFSKCALSEKMGSTCSKLTLLDMGGNFMDRLPDSFG 293

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN-NLLKKLPSSIGNLRKLKCLDLEEN 459
           +   +  L LG+            +  LE     N N L  LP S  +L KL  L L+EN
Sbjct: 294 SMNNIRTLKLGSC-----------IGELERRAFQNGNWLTYLPESFCDLTKLSALYLDEN 342

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
            L+ LP   G L  L+ L L  N L  LP +   L +L    + +N +Q +P E G L  
Sbjct: 343 LLQELPENFGNLVNLEFLDLGQNALHELPDSFCKLKSLKVCQLSKNKIQILPSEFGDLSA 402

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L L DN  L  +P      + L+ + L N  L++IP  +
Sbjct: 403 LEDLRL-DNNLLEELPQSFNKLTGLKSLDLFNNKLTEIPDAL 443



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 114/272 (41%), Gaps = 66/272 (24%)

Query: 101 ENILNLDLSKSSITHLPPSV---------------------------------------- 120
           EN+  +DLS + + +LP                                           
Sbjct: 201 ENLEVVDLSGNHMENLPDHFNSAHCVLKFYADRNKLTDVPLWLADMREALEISMSDNQFS 260

Query: 121 -----EKL----THLEELYLYGNKLASLPSQIGYVTNL------TCLGLAE-------NS 158
                EK+    + L  L + GN +  LP   G + N+      +C+G  E       N 
Sbjct: 261 KCALSEKMGSTCSKLTLLDMGGNFMDRLPDSFGSMNNIRTLKLGSCIGELERRAFQNGNW 320

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT LP+S  +L +L  L L  N L ELP     L +L+ L L  N +  +      L +L
Sbjct: 321 LTYLPESFCDLTKLSALYLDENLLQELPENFGNLVNLEFLDLGQNALHELPDSFCKLKSL 380

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            +  +  NKI+ LP E G+L  L  L L +N LEELP+     T L +LDL +N+L  IP
Sbjct: 381 KVCQLSKNKIQILPSEFGDLSALEDLRLDNNLLEELPQSFNKLTGLKSLDLFNNKLTEIP 440

Query: 279 DMLGNLINLTRLRLSYNRLE----SVPETLSK 306
           D L N   L RL LS NR       VP+ +++
Sbjct: 441 DALNNFKQLVRLDLSENRFNIPWYDVPQIVTQ 472



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 64/129 (49%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LDL ++++  LP S  KL  L+   L  NK+  LPS+ G ++ L  L L  N L  
Sbjct: 356 NLEFLDLGQNALHELPDSFCKLKSLKVCQLSKNKIQILPSEFGDLSALEDLRLDNNLLEE 415

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP S   L  L+ LDL +NKL E+P  +     L  L L  NR      D+  +   S  
Sbjct: 416 LPQSFNKLTGLKSLDLFNNKLTEIPDALNNFKQLVRLDLSENRFNIPWYDVPQIVTQSKY 475

Query: 222 SMRDNKIRE 230
             RD ++++
Sbjct: 476 PQRDPELKD 484



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 4/96 (4%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           CK +++    LSK+ I  LP     L+ LE+L L  N L  LP     +T L  L L  N
Sbjct: 375 CKLKSLKVCQLSKNKIQILPSEFGDLSALEDLRLDNNLLEELPQSFNKLTGLKSLDLFNN 434

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLN----ELPMVV 189
            LT +PD+L N +QL  LDL  N+ N    ++P +V
Sbjct: 435 KLTEIPDALNNFKQLVRLDLSENRFNIPWYDVPQIV 470


>gi|334348870|ref|XP_001378202.2| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387-like [Monodelphis domestica]
          Length = 1009

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 157/525 (29%), Positives = 235/525 (44%), Gaps = 44/525 (8%)

Query: 63  KTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEK 122
           KT  VK+   +K K  T + EP    L I              L + ++ +  LPP +  
Sbjct: 209 KTQEVKYLYLDKNKIKTFEVEPDMVGLEI--------------LSMKENELIALPPEINM 254

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
           L +L  L +  N+LASLP+Q+  +  L  L L  N+    P  L  L  L +L L  N L
Sbjct: 255 LCNLSVLSVSHNQLASLPAQLSQLVKLRQLFLDYNNFWEFPAILERLTMLELLSLSGNYL 314

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQ-YLSNLSMLSMRDNKIRELPPELGELKNL 241
             LP     + +LKIL L  N+  ++ P+I  YLS L  L +  N I  LP E+ +LKNL
Sbjct: 315 QVLPQTTANMKNLKILNLSSNQF-SIFPNILCYLSKLVKLRISKNFISSLPKEIKQLKNL 373

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL----------------- 284
             L L HN L  LP +I     L  LDL HN+L  +   + N                  
Sbjct: 374 EELFLDHNQLTFLPVQIFRLIKLRKLDLVHNKLDILSHNIENFKDLKALLLDNNLLKNLG 433

Query: 285 ------INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
                   L  L L+ N LE +P  + +  +L E ++    ++ L +  +S L  I  + 
Sbjct: 434 KEIYSCAQLEYLSLNDNFLEKIPNNIYRLKNLRELHINRNKMTVLSED-ISHLKYIRVLN 492

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
            S N     P       + +  ++   N+I   P G+ + +  L  +N+  N L+ +P+D
Sbjct: 493 FSGNIIKEVPV-ELKNCSQMRKVDLSFNKIYSFPVGLCALSF-LEYLNLNGNELSEIPVD 550

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           L     L  L L  N  +  S  I  L NL  L LS N +  +PSSI N+  L+ L L +
Sbjct: 551 LSYSKQLIHLELNQNDFAYFSHHICKLKNLNFLNLSKNKIHHIPSSISNMTSLQVLLLSD 610

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           NK E  P E+  L  LQ L +  NQ+  +P  I +L  +  L +  N  +S P E+  L 
Sbjct: 611 NKFEIFPQELCTLGNLQILDISENQVQFIPSEISNLQVIQKLDISSNRFESFPNELCQLS 670

Query: 519 NLHTLYL--NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L  L L   +   LN +  EL    +L+I+ + +  + +IP  I
Sbjct: 671 TLTELKLCQKNGWKLNQVSEELTNLIHLKILDISHNNIKEIPKNI 715



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 226/452 (50%), Gaps = 29/452 (6%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C    ++ L +SK+ I+ LP  +++L +LEEL+L  N+L  LP QI  +  L  L L  N
Sbjct: 345 CYLSKLVKLRISKNFISSLPKEIKQLKNLEELFLDHNQLTFLPVQIFRLIKLRKLDLVHN 404

Query: 158 SLTSLPDSLANLQ-----------------------QLRVLDLRHNKLNELPMVVYKLTS 194
            L  L  ++ N +                       QL  L L  N L ++P  +Y+L +
Sbjct: 405 KLDILSHNIENFKDLKALLLDNNLLKNLGKEIYSCAQLEYLSLNDNFLEKIPNNIYRLKN 464

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L+ L++  N++  +  DI +L  + +L+   N I+E+P EL     +  +DL+ N +   
Sbjct: 465 LRELHINRNKMTVLSEDISHLKYIRVLNFSGNIIKEVPVELKNCSQMRKVDLSFNKIYSF 524

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P  +   + L  L+L  NEL  IP  L     L  L L+ N        + K  +LN  N
Sbjct: 525 PVGLCALSFLEYLNLNGNELSEIPVDLSYSKQLIHLELNQNDFAYFSHHICKLKNLNFLN 584

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +    +  +P  + S++TS+  + LS NKF  +P    T   ++  ++   NQ+  IP  
Sbjct: 585 LSKNKIHHIPSSI-SNMTSLQVLLLSDNKFEIFPQELCT-LGNLQILDISENQVQFIPSE 642

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN---QISKLSEDIQNLVNLEVL 431
           I S  + + K+++  N   S P +L     LTEL L      +++++SE++ NL++L++L
Sbjct: 643 I-SNLQVIQKLDISSNRFESFPNELCQLSTLTELKLCQKNGWKLNQVSEELTNLIHLKIL 701

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            +S+N +K++P +IG L++L   +   N +  LP   G L +LQ+L +  N+L +LP  +
Sbjct: 702 DISHNNIKEIPKNIGELKRLATFNASNNLIHILPPSFGSLNKLQQLDMSENRLTTLPTNL 761

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
             L +L  ++   N L   P E+   ++L+ +
Sbjct: 762 SSLPSLKEINFDGNPLIRPPPEVCRGKDLNVI 793


>gi|403265578|ref|XP_003925006.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Saimiri boliviensis boliviensis]
          Length = 560

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 224/463 (48%), Gaps = 60/463 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           ++ S  S+T +P  +   T LEE++L  N++  +P +I  + N+  L L +N+L SL  +
Sbjct: 30  INASNQSLTAIPLEIFAFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPA 89

Query: 166 LAN------------------------LQQLRVLDLRHNKLNELPMVVYK---------- 191
           L                          L+ LR L L    L E+P+++ K          
Sbjct: 90  LGQLSSLESLDLSYNPIFSSSLLVVSFLRALRELRLYQTDLKEIPIIICKNLHHLELLGL 149

Query: 192 --------------LTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
                          T L+ +YL+ N+ +    ++  L NL ++ + +NKI  +P E+G 
Sbjct: 150 TGNHLKCLPKEIVNQTKLREIYLKQNQFEVFPQELCVLYNLEIIDLDENKIGAIPEEIGH 209

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L  L    +A N+L  LP  +  C+ L  LDL HN L +IP+ L  L  +T + LS NRL
Sbjct: 210 LMRLQKFFVASNNLPVLPASLCQCSQLSVLDLSHNLLHSIPNSLAELGEMTEIGLSGNRL 269

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
           E VP  + +   L+   +    L  L  G    L ++  + LS+N    Y    P Q  +
Sbjct: 270 EKVPRLICRWTSLHLLYLRNTGLHRL-RGSFRRLVNLRCLDLSQN----YLDHCPPQICA 324

Query: 358 VYSIN---FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
           + ++     + N+I ++P  + S +K L  + +  N   S P ++ +   L +L +G +Q
Sbjct: 325 LENLEVLALDDNKIWQLPSELGSLSK-LKILGLTGNEFLSFPEEVLSLESLEKLYIGQDQ 383

Query: 415 ISKLS---EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
            SKL+   EDI  L +L+ L + NN L+ LP S+G++  L+ LD   N L+ LP+ I   
Sbjct: 384 GSKLTYVPEDIGKLQSLKELYIENNHLEYLPMSLGSMPNLEVLDCRHNLLKQLPDAICQA 443

Query: 472 KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           + LQ L+L+ N L  LP  +  L N+  L++ +N ++  P+E+
Sbjct: 444 QALQELLLEDNLLTHLPENLDSLVNIKVLTLMDNPMEEPPKEV 486



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 162/319 (50%), Gaps = 29/319 (9%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+  +DL ++ I  +P  +  L  L++ ++  N L  LP+ +   + L+ L L+ N
Sbjct: 185 CVLYNLEIIDLDENKIGAIPEEIGHLMRLQKFFVASNNLPVLPASLCQCSQLSVLDLSHN 244

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L S+P+SLA L ++  + L  N+L ++P ++ + TSL +LYLR   +  +    + L N
Sbjct: 245 LLHSIPNSLAELGEMTEIGLSGNRLEKVPRLICRWTSLHLLYLRNTGLHRLRGSFRRLVN 304

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N +   PP++  L+NL  L L  N + +LP E+G+ + L  L L  NE ++ 
Sbjct: 305 LRCLDLSQNYLDHCPPQICALENLEVLALDDNKIWQLPSELGSLSKLKILGLTGNEFLSF 364

Query: 278 PDMLGNLINLTRLRLSYN---RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           P+ + +L +L +L +  +   +L  VPE + K   L E  +E   L  LP     SL S+
Sbjct: 365 PEEVLSLESLEKLYIGQDQGSKLTYVPEDIGKLQSLKELYIENNHLEYLP----MSLGSM 420

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            N+ +                     ++  HN + ++P  I  +A+ L ++ ++DNLLT 
Sbjct: 421 PNLEV---------------------LDCRHNLLKQLPDAI-CQAQALQELLLEDNLLTH 458

Query: 395 LPLDLGTWVGLTELNLGTN 413
           LP +L + V +  L L  N
Sbjct: 459 LPENLDSLVNIKVLTLMDN 477



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 195/405 (48%), Gaps = 55/405 (13%)

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L  +P+ ++  T L+ ++L  N+I+ +  +IQ L N+ +L +  N +R L P LG+L +L
Sbjct: 37  LTAIPLEIFAFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPALGQLSSL 96

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
            +LDL++N        I + ++LV   L+                L  LRL    L+ +P
Sbjct: 97  ESLDLSYN-------PIFSSSLLVVSFLR---------------ALRELRLYQTDLKEIP 134

Query: 302 ETLSKCVH-LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYS 360
             + K +H L    + G  L  LP  +++  T +  I L +N+F  +P     +   +Y+
Sbjct: 135 IIICKNLHHLELLGLTGNHLKCLPKEIVNQ-TKLREIYLKQNQFEVFPQ----ELCVLYN 189

Query: 361 ---INFEHNQIDKIPYGI--------FSRAKN--------------LSKVNMKDNLLTSL 395
              I+ + N+I  IP  I        F  A N              LS +++  NLL S+
Sbjct: 190 LEIIDLDENKIGAIPEEIGHLMRLQKFFVASNNLPVLPASLCQCSQLSVLDLSHNLLHSI 249

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P  L     +TE+ L  N++ K+   I    +L +L L N  L +L  S   L  L+CLD
Sbjct: 250 PNSLAELGEMTEIGLSGNRLEKVPRLICRWTSLHLLYLRNTGLHRLRGSFRRLVNLRCLD 309

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L +N L+  P +I  L+ L+ L L  N++  LP  +G L+ L  L +  N   S PEE+ 
Sbjct: 310 LSQNYLDHCPPQICALENLEVLALDDNKIWQLPSELGSLSKLKILGLTGNEFLSFPEEVL 369

Query: 516 TLENLHTLYL--NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           +LE+L  LY+  +  + L  +P ++    +L+ + ++N  L  +P
Sbjct: 370 SLESLEKLYIGQDQGSKLTYVPEDIGKLQSLKELYIENNHLEYLP 414



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 107/251 (42%), Gaps = 64/251 (25%)

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
           +N  +  LT++PL++  +  L E++L  NQI ++ ++IQ L N+ VL L  N L+ L  +
Sbjct: 30  INASNQSLTAIPLEIFAFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPA 89

Query: 445 IG------------------------------------------------NLRKLKCLDL 456
           +G                                                NL  L+ L L
Sbjct: 90  LGQLSSLESLDLSYNPIFSSSLLVVSFLRALRELRLYQTDLKEIPIIICKNLHHLELLGL 149

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N L+ LP EI    +L+ + L+ NQ    P+ +  L NL  + + EN + +IPEEIG 
Sbjct: 150 TGNHLKCLPKEIVNQTKLREIYLKQNQFEVFPQELCVLYNLEIIDLDENKIGAIPEEIGH 209

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP---------SEIVVGG-- 565
           L  L   ++  N  L  +P  L  CS L ++ L +  L  IP         +EI + G  
Sbjct: 210 LMRLQKFFVASNN-LPVLPASLCQCSQLSVLDLSHNLLHSIPNSLAELGEMTEIGLSGNR 268

Query: 566 ----PSLIIRY 572
               P LI R+
Sbjct: 269 LEKVPRLICRW 279


>gi|324500914|gb|ADY40414.1| Protein lap1 [Ascaris suum]
          Length = 1136

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/382 (33%), Positives = 195/382 (51%), Gaps = 9/382 (2%)

Query: 171 QLRVLDLRHNKLNELPMVVYKLTS-LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR 229
           ++ V++ R   L+ELP  V +  S L+ LYL  N+I  +   +     L  LS+  NKI 
Sbjct: 14  RVDVIEKRQCNLHELPAEVERSASCLEELYLDCNQICEIPEGLCRCKKLRSLSLGQNKIL 73

Query: 230 ELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTR 289
            +PP +G L  L  L L  N L +LP+E+  C+ L  LDL+ N L  +PD++  L +LT 
Sbjct: 74  RVPPAIGSLIALEELHLEDNELSDLPEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTH 133

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP- 348
           L L    L  +P  + +  +L   +V    L  LP  +   L  +  + L RN+ +  P 
Sbjct: 134 LYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQ-LKHLRELDLGRNELSHLPL 192

Query: 349 -SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
             G       +Y    +HN +  +P  + S   +L  +++  N LT+LP ++G    L E
Sbjct: 193 NMGSLEVLEDLY---VDHNVLSAVPDSLTS-CGHLRTLDVSQNDLTALPKEIGDLEQLCE 248

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           L++  N+I+ L   I  L NL  L   +N L +L  +IG    L  L L  N+L +LP  
Sbjct: 249 LSIAENRIAALPNSIGRLKNLVTLKADSNALTELVPTIGECSSLLELYLFNNQLTTLPAT 308

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
           IG LKEL  L +  NQL  +P AIG  + LS L++  N L+ +P E+G L NL  L L D
Sbjct: 309 IGGLKELSVLSIDENQLEEIPSAIGGCSKLSILTLRGNRLRELPLEVGRLANLRVLDLCD 368

Query: 528 NTCLNNIPFELALCSNLQIMSL 549
           N  L  +PF + +  NL+ + L
Sbjct: 369 NI-LAFLPFTINVLFNLRALWL 389



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 199/408 (48%), Gaps = 33/408 (8%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C EE  L LD ++  I  +P  + +   L  L L  NK+  +P  IG +  L  L L +N
Sbjct: 38  CLEE--LYLDCNQ--ICEIPEGLCRCKKLRSLSLGQNKILRVPPAIGSLIALEELHLEDN 93

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L+ LP+ L     L++LDLR N L  LP VV +L+SL  LYL    +  + PDI  L N
Sbjct: 94  ELSDLPEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQN 153

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +R+N++R LPP + +LK+L  LDL  N L  LP  +G+  +L  L + HN L  +
Sbjct: 154 LRSLDVRENQLRILPPAICQLKHLRELDLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAV 213

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           PD L +  +L  L +S N L ++P+ +     L E ++    +++LP+    S+  + N+
Sbjct: 214 PDSLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALPN----SIGRLKNL 269

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
              +    A     PT                           +L ++ + +N LT+LP 
Sbjct: 270 VTLKADSNALTELVPT----------------------IGECSSLLELYLFNNQLTTLPA 307

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
            +G    L+ L++  NQ+ ++   I     L +L L  N L++LP  +G L  L+ LDL 
Sbjct: 308 TIGGLKELSVLSIDENQLEEIPSAIGGCSKLSILTLRGNRLRELPLEVGRLANLRVLDLC 367

Query: 458 ENKLESLPNEIGFLKELQRLIL---QSNQLVSLPRAIGHLTNLSYLSV 502
           +N L  LP  I  L  L+ L L   Q++ LV    A   +T +  L+ 
Sbjct: 368 DNILAFLPFTINVLFNLRALWLSVDQTSPLVPFESAQDPVTRVKVLTT 415



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 184/345 (53%), Gaps = 5/345 (1%)

Query: 218 LSMLSMRDNKIRELPPELGELKN-LVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           + ++  R   + ELP E+    + L  L L  N + E+P+ +  C  L +L L  N+++ 
Sbjct: 15  VDVIEKRQCNLHELPAEVERSASCLEELYLDCNQICEIPEGLCRCKKLRSLSLGQNKILR 74

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G+LI L  L L  N L  +PE L KC +L   ++    L+ LPD +++ L+S+ +
Sbjct: 75  VPPAIGSLIALEELHLEDNELSDLPEELVKCSNLKILDLRLNLLTRLPD-VVTRLSSLTH 133

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L     T  P     Q  ++ S++   NQ+  +P  I  + K+L ++++  N L+ LP
Sbjct: 134 LYLFETSLTQLPPD-IDQLQNLRSLDVRENQLRILPPAI-CQLKHLRELDLGRNELSHLP 191

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
           L++G+   L +L +  N +S + + + +  +L  L +S N L  LP  IG+L +L  L +
Sbjct: 192 LNMGSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSI 251

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
            EN++ +LPN IG LK L  L   SN L  L   IG  ++L  L +  N L ++P  IG 
Sbjct: 252 AENRIAALPNSIGRLKNLVTLKADSNALTELVPTIGECSSLLELYLFNNQLTTLPATIGG 311

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L+ L  L +++N  L  IP  +  CS L I++L    L ++P E+
Sbjct: 312 LKELSVLSIDENQ-LEEIPSAIGGCSKLSILTLRGNRLRELPLEV 355


>gi|332023058|gb|EGI63323.1| Protein lap4 [Acromyrmex echinatior]
          Length = 2051

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 197/394 (50%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L  +P  + + + SL+ L L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEYVDKRHCSLPCVPDDILRYSRSLEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P+ I N   L   D   N +  +P     L NLT
Sbjct: 73  HRLPPDIQNFENLVELDVSRNDIPDIPENIKNLQALQVADFSSNPIPRLPAGFVQLRNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L SLP+ L S L  +  + L  N+    P
Sbjct: 133 VLGLNDMSLTNLPSDFGSLEALQSLELRENLLKSLPESL-SQLLKLERLDLGDNEIEELP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
           +    Q  ++  +  +HNQ+  +P  I    K L+ +++ +N L  LP ++G    LT+L
Sbjct: 192 AH-IGQLPALQELWLDHNQLQHLPPEI-GELKTLACLDVSENRLEDLPDEIGGLESLTDL 249

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           +L                       S N+++KLP  +G L+KL  L +++N+L +L   I
Sbjct: 250 HL-----------------------SQNVIEKLPDGLGELKKLTILKIDQNRLSTLNPNI 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + LQ LIL  N L+ LP +IG L NL+ L+V  N+LQS+P EIG L+ L  L L DN
Sbjct: 287 GRCENLQELILTENFLLELPLSIGKLYNLNNLNVDRNSLQSLPIEIGNLKKLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P E+  CS L ++ +    L  +P  ++
Sbjct: 347 K-LQYLPIEVGQCSALHVLDVSGNRLHYLPYSLI 379



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 187/404 (46%), Gaps = 52/404 (12%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  + I  LP +  +L  L +L L  N++  LP  I    NL  L ++ N +  +P+++ 
Sbjct: 44  LDANHIRDLPKNFFRLQRLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDIPENIK 103

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
           NLQ L+V D   N +  LP    +L +L +L L    +  +  D   L  L  L +R+N 
Sbjct: 104 NLQALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPSDFGSLEALQSLELRENL 163

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           ++ LP  L +L  L  LDL  N +EELP  IG    L  L L HN+L ++P  +G L  L
Sbjct: 164 LKSLPESLSQLLKLERLDLGDNEIEELPAHIGQLPALQELWLDHNQLQHLPPEIGELKTL 223

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF-TA 346
             L +S NRLE +P+ +     L + ++    +  LPDG L  L  +  + + +N+  T 
Sbjct: 224 ACLDVSENRLEDLPDEIGGLESLTDLHLSQNVIEKLPDG-LGELKKLTILKIDQNRLSTL 282

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+ G                          R +NL ++ + +N L  LPL +G      
Sbjct: 283 NPNIG--------------------------RCENLQELILTENFLLELPLSIG------ 310

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
                             L NL  L +  N L+ LP  IGNL+KL  L L +NKL+ LP 
Sbjct: 311 -----------------KLYNLNNLNVDRNSLQSLPIEIGNLKKLGVLSLRDNKLQYLPI 353

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           E+G    L  L +  N+L  LP ++ +L NL  + + EN  Q +
Sbjct: 354 EVGQCSALHVLDVSGNRLHYLPYSLINL-NLKAVWLSENQAQPM 396



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 172/336 (51%), Gaps = 27/336 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P +++ L  L+      N +  LP+    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPENIKNLQALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L+ L+ L+LR N L  LP  + +L  L+ L L  N I+ +   I  L  L  
Sbjct: 143 NLPSDFGSLEALQSLELRENLLKSLPESLSQLLKLERLDLGDNEIEELPAHIGQLPALQE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPE+GELK L  LD++ N LE+LP EIG    L  L L  N +  +PD 
Sbjct: 203 LWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPDEIGGLESLTDLHLSQNVIEKLPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           LG L  LT L++  NRL ++   + +C +L E  +    L  LP   +  L ++NN+ + 
Sbjct: 263 LGELKKLTILKIDQNRLSTLNPNIGRCENLQELILTENFLLELPLS-IGKLYNLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN   + P                      I  G     K L  ++++DN L  LP+++G
Sbjct: 322 RNSLQSLP----------------------IEIGNL---KKLGVLSLRDNKLQYLPIEVG 356

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
               L  L++  N++  L   + NL NL+ + LS N
Sbjct: 357 QCSALHVLDVSGNRLHYLPYSLINL-NLKAVWLSEN 391


>gi|254390720|ref|ZP_05005933.1| leucine-rich repeat-containing protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294812695|ref|ZP_06771338.1| Small GTP-binding protein [Streptomyces clavuligerus ATCC 27064]
 gi|197704420|gb|EDY50232.1| leucine-rich repeat-containing protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294325294|gb|EFG06937.1| Small GTP-binding protein [Streptomyces clavuligerus ATCC 27064]
          Length = 395

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/334 (33%), Positives = 172/334 (51%), Gaps = 30/334 (8%)

Query: 156 ENSLTSLPDSL---ANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
           E  + SLP++L   A L+ L  LDL  N L++LP  + +L  L  L L  N+       +
Sbjct: 68  EQGMRSLPEALPEIARLEDLAALDLSFNLLDDLPADLGRLHRLTELRLDSNQFSRFPDAV 127

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L+ L +LS+  N +  +P  LG L+ +  L+LA N L  +P EIG  + L TLDL HN
Sbjct: 128 LGLTGLQVLSLYRNGLSNVPSGLGGLREIRVLNLAGNRLSSVPAEIGALSRLHTLDLGHN 187

Query: 273 ELVNIPDMLGNLINLTR-LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           EL +IP  LG++  L+R L LS N++ SVP++L +  HL   N+    L++LP+      
Sbjct: 188 ELTDIPPSLGDVTGLSRYLYLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPE------ 241

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
                      +F            S+  +   HN++  +P  I +  + L + ++  N 
Sbjct: 242 -----------RF--------GDLASLRELRLYHNRLTGLPRSIGA-LRELREAHLMGNR 281

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           LT LP ++G    L EL L  N+++ L + I  LV L  L L NN L+ +P +IG L +L
Sbjct: 282 LTGLPEEIGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDLRNNELRAVPDAIGRLDRL 341

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
             LDL  N+L  LP  +  L  L++L L+ N L 
Sbjct: 342 THLDLRNNRLHELPPTLAALPRLEKLDLRWNPLA 375



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/342 (33%), Positives = 169/342 (49%), Gaps = 31/342 (9%)

Query: 221 LSMRDNKIRELP---PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           LS R+  +R LP   PE+  L++L  LDL+ N L++LP ++G    L  L L  N+    
Sbjct: 64  LSAREQGMRSLPEALPEIARLEDLAALDLSFNLLDDLPADLGRLHRLTELRLDSNQFSRF 123

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           PD +  L  L  L L  N L +VP  L     +   N+ G  LSS+P   + +L+ ++ +
Sbjct: 124 PDAVLGLTGLQVLSLYRNGLSNVPSGLGGLREIRVLNLAGNRLSSVP-AEIGALSRLHTL 182

Query: 338 TLSRNKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
            L  N+ T  P S G     S Y +    N+I  +P  +  R  +L  +N+ DN LT+LP
Sbjct: 183 DLGHNELTDIPPSLGDVTGLSRY-LYLSDNKITSVPDSL-CRLGHLRYLNITDNRLTALP 240

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
                                  E   +L +L  L L +N L  LP SIG LR+L+   L
Sbjct: 241 -----------------------ERFGDLASLRELRLYHNRLTGLPRSIGALRELREAHL 277

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+L  LP EIG L +L+ L L  N++ +LP  IG L  L+ L +  N L+++P+ IG 
Sbjct: 278 MGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDLRNNELRAVPDAIGR 337

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L+ L  L L +N  L+ +P  LA    L+ + L   PL+  P
Sbjct: 338 LDRLTHLDLRNNR-LHELPPTLAALPRLEKLDLRWNPLALDP 378



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 147/319 (46%), Gaps = 25/319 (7%)

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
           P+I  L +L+ L +  N + +LP +LG L  L  L L  N     P  +   T L  L L
Sbjct: 79  PEIARLEDLAALDLSFNLLDDLPADLGRLHRLTELRLDSNQFSRFPDAVLGLTGLQVLSL 138

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
             N L N+P  LG L  +  L L+ NRL SVP  +     L+  ++    L+ +P     
Sbjct: 139 YRNGLSNVPSGLGGLREIRVLNLAGNRLSSVPAEIGALSRLHTLDLGHNELTDIP----- 193

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
                             PS G     S Y +    N+I  +P  +  R  +L  +N+ D
Sbjct: 194 ------------------PSLGDVTGLSRY-LYLSDNKITSVPDSL-CRLGHLRYLNITD 233

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
           N LT+LP   G    L EL L  N+++ L   I  L  L    L  N L  LP  IG L 
Sbjct: 234 NRLTALPERFGDLASLRELRLYHNRLTGLPRSIGALRELREAHLMGNRLTGLPEEIGGLA 293

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            L+ L L +N++ +LP+ IG L  L RL L++N+L ++P AIG L  L++L +  N L  
Sbjct: 294 DLRELRLMDNRVTALPDTIGGLVRLTRLDLRNNELRAVPDAIGRLDRLTHLDLRNNRLHE 353

Query: 510 IPEEIGTLENLHTLYLNDN 528
           +P  +  L  L  L L  N
Sbjct: 354 LPPTLAALPRLEKLDLRWN 372



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 169/342 (49%), Gaps = 36/342 (10%)

Query: 138 SLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
           +LP +I  + +L  L L+ N L  LP  L  L +L  L L  N+ +  P  V  LT L++
Sbjct: 77  ALP-EIARLEDLAALDLSFNLLDDLPADLGRLHRLTELRLDSNQFSRFPDAVLGLTGLQV 135

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L L  N +  V   +  L  + +L++  N++  +P E+G L  L TLDL HN        
Sbjct: 136 LSLYRNGLSNVPSGLGGLREIRVLNLAGNRLSSVPAEIGALSRLHTLDLGHN-------- 187

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTR-LRLSYNRLESVPETLSKCVHLNEFNVE 316
                          EL +IP  LG++  L+R L LS N++ SVP++L +  HL   N+ 
Sbjct: 188 ---------------ELTDIPPSLGDVTGLSRYLYLSDNKITSVPDSLCRLGHLRYLNIT 232

Query: 317 GCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH---NQIDKIPY 373
              L++LP+     L S+  + L  N+ T    G P    ++  +   H   N++  +P 
Sbjct: 233 DNRLTALPE-RFGDLASLRELRLYHNRLT----GLPRSIGALRELREAHLMGNRLTGLPE 287

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
            I   A +L ++ + DN +T+LP  +G  V LT L+L  N++  + + I  L  L  L L
Sbjct: 288 EIGGLA-DLRELRLMDNRVTALPDTIGGLVRLTRLDLRNNELRAVPDAIGRLDRLTHLDL 346

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEEN--KLESLPNEIGFLKE 473
            NN L +LP ++  L +L+ LDL  N   L+ LP  +  L++
Sbjct: 347 RNNRLHELPPTLAALPRLEKLDLRWNPLALDPLPAWVSSLEQ 388



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 162/320 (50%), Gaps = 11/320 (3%)

Query: 103 ILNLDLSKSSITHLP---PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL 159
           +++L   +  +  LP   P + +L  L  L L  N L  LP+ +G +  LT L L  N  
Sbjct: 61  VVSLSAREQGMRSLPEALPEIARLEDLAALDLSFNLLDDLPADLGRLHRLTELRLDSNQF 120

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           +  PD++  L  L+VL L  N L+ +P  +  L  +++L L  NR+ +V  +I  LS L 
Sbjct: 121 SRFPDAVLGLTGLQVLSLYRNGLSNVPSGLGGLREIRVLNLAGNRLSSVPAEIGALSRLH 180

Query: 220 MLSMRDNKIRELPPELGELKNLVT-LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            L +  N++ ++PP LG++  L   L L+ N +  +P  +     L  L++  N L  +P
Sbjct: 181 TLDLGHNELTDIPPSLGDVTGLSRYLYLSDNKITSVPDSLCRLGHLRYLNITDNRLTALP 240

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           +  G+L +L  LRL +NRL  +P ++     L E ++ G  L+ LP+  +  L  +  + 
Sbjct: 241 ERFGDLASLRELRLYHNRLTGLPRSIGALRELREAHLMGNRLTGLPEE-IGGLADLRELR 299

Query: 339 LSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           L  N+ TA P   GG  + T    ++  +N++  +P  I  R   L+ +++++N L  LP
Sbjct: 300 LMDNRVTALPDTIGGLVRLT---RLDLRNNELRAVPDAI-GRLDRLTHLDLRNNRLHELP 355

Query: 397 LDLGTWVGLTELNLGTNQIS 416
             L     L +L+L  N ++
Sbjct: 356 PTLAALPRLEKLDLRWNPLA 375



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 152/307 (49%), Gaps = 6/307 (1%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            + E++  LDLS + +  LP  + +L  L EL L  N+ +  P  +  +T L  L L  N
Sbjct: 82  ARLEDLAALDLSFNLLDDLPADLGRLHRLTELRLDSNQFSRFPDAVLGLTGLQVLSLYRN 141

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L+++P  L  L+++RVL+L  N+L+ +P  +  L+ L  L L  N +  + P +  ++ 
Sbjct: 142 GLSNVPSGLGGLREIRVLNLAGNRLSSVPAEIGALSRLHTLDLGHNELTDIPPSLGDVTG 201

Query: 218 LS-MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           LS  L + DNKI  +P  L  L +L  L++  N L  LP+  G+   L  L L HN L  
Sbjct: 202 LSRYLYLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTG 261

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L  L    L  NRL  +PE +     L E  +    +++LPD  +  L  +  
Sbjct: 262 LPRSIGALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPD-TIGGLVRLTR 320

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L  N+  A P     +   +  ++  +N++ ++P  + +  + L K++++ N L   P
Sbjct: 321 LDLRNNELRAVPD-AIGRLDRLTHLDLRNNRLHELPPTLAALPR-LEKLDLRWNPLALDP 378

Query: 397 LDLGTWV 403
           L    WV
Sbjct: 379 LP--AWV 383



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 130/254 (51%), Gaps = 6/254 (2%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           N+       +E  +LNL  + + ++ +P  +  L+ L  L L  N+L  +P  +G VT L
Sbjct: 145 NVPSGLGGLREIRVLNL--AGNRLSSVPAEIGALSRLHTLDLGHNELTDIPPSLGDVTGL 202

Query: 150 T-CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           +  L L++N +TS+PDSL  L  LR L++  N+L  LP     L SL+ L L  NR+  +
Sbjct: 203 SRYLYLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGL 262

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
              I  L  L    +  N++  LP E+G L +L  L L  N +  LP  IG    L  LD
Sbjct: 263 PRSIGALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIGGLVRLTRLD 322

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG--CALSSLPDG 326
           L++NEL  +PD +G L  LT L L  NRL  +P TL+    L + ++     AL  LP  
Sbjct: 323 LRNNELRAVPDAIGRLDRLTHLDLRNNRLHELPPTLAALPRLEKLDLRWNPLALDPLP-A 381

Query: 327 LLSSLTSINNITLS 340
            +SSL     + L+
Sbjct: 382 WVSSLEQRGCVVLT 395



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 116/207 (56%), Gaps = 4/207 (1%)

Query: 358 VYSINFEHNQIDKIPYGI--FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
           V S++     +  +P  +   +R ++L+ +++  NLL  LP DLG    LTEL L +NQ 
Sbjct: 61  VVSLSAREQGMRSLPEALPEIARLEDLAALDLSFNLLDDLPADLGRLHRLTELRLDSNQF 120

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           S+  + +  L  L+VL L  N L  +PS +G LR+++ L+L  N+L S+P EIG L  L 
Sbjct: 121 SRFPDAVLGLTGLQVLSLYRNGLSNVPSGLGGLREIRVLNLAGNRLSSVPAEIGALSRLH 180

Query: 476 RLILQSNQLVSLPRAIGHLTNLS-YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
            L L  N+L  +P ++G +T LS YL + +N + S+P+ +  L +L  L + DN  L  +
Sbjct: 181 TLDLGHNELTDIPPSLGDVTGLSRYLYLSDNKITSVPDSLCRLGHLRYLNITDNR-LTAL 239

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEI 561
           P      ++L+ + L +  L+ +P  I
Sbjct: 240 PERFGDLASLRELRLYHNRLTGLPRSI 266


>gi|301112348|ref|XP_002905253.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262095583|gb|EEY53635.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 702

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 154/510 (30%), Positives = 241/510 (47%), Gaps = 43/510 (8%)

Query: 106 LDLSKSSITH-LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           LDLS + +   L  S   L  L+EL L GNKL+ LP+ I  + NL  L + EN LT+LP+
Sbjct: 119 LDLSHNELEQNLSESFGALIGLKELGLSGNKLSHLPNSITLLENLEALHVDENKLTALPE 178

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
            + NL +L VL+   N L  LP     L +++ L L+ NR+++    +  L+ L  L +R
Sbjct: 179 RIGNLHKLHVLNAHSNHLTALPSSFGALRNMQNLDLKKNRLESTGDALATLTKLKFLDLR 238

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTML------VTLDLQHNELVNIP 278
            NK+    P L E  +L  + L +N L      I   ++L        LD++ N+L N+P
Sbjct: 239 QNKLAVF-PALPEGADLDQVFLGYNTL----STINETSILRVKDSVTVLDMRDNKLANLP 293

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS-LTSINNI 337
             +  L  L  L ++ N L  +P  L    HLN F V+G  L ++   ++S+   S+   
Sbjct: 294 ANIACLYRLKTLDVANNDLSDLPPGLGYLKHLNHFIVDGNPLRAIRRAVISAGCESLKKY 353

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQI------------------DKIPYGIFSRA 379
             +R    A P+G          +  E  Q                   D +  G F   
Sbjct: 354 LRTRG---APPAGVDVLEEERDELQIEREQAAASGTMILMNNSLNVLPPDLVGQGQFDFG 410

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL- 438
             L  +N+  N L SLP  +G  V L  L +  N++  L   I  L +LE+L L  N L 
Sbjct: 411 STLFHLNLSSNQLRSLPAAIGELVSLKTLTVEDNELQALDPSIAALPHLELLRLRKNSLS 470

Query: 439 -KKLPSSIGNL----RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR-AIG 492
            + +   +GN       LK LD+  N L +LP EI  L+ L+ L+L  N+L +L R    
Sbjct: 471 AESISEFLGNSPALGDSLKELDVRNNSLATLPVEISQLRSLETLLLGFNRLETLDRFPWS 530

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            LT +S +SV +N L+++   I     L +L   +N+ L  +P EL LC +L+ + ++  
Sbjct: 531 QLTKVSVVSVSDNKLRAL-GRIYDAPLLASLSFENNS-LTKVPCELGLCPHLRAIYMNGN 588

Query: 553 PLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           P   +   ++  G + I+ YLK + P  T+
Sbjct: 589 PQRTVRGGVIAKGSAEILAYLKNKLPPDTV 618



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 132/280 (47%), Gaps = 28/280 (10%)

Query: 237 ELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNR 296
           E  +LV +DL+HN +  +  EIG  T + ++ L  N L  +P+    L  LT L LS+N 
Sbjct: 66  ECIDLVKMDLSHNAIPSISDEIGGLTSVTSIKLTKNALQVLPEGFFELHALTYLDLSHNE 125

Query: 297 LE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
           LE ++ E+    + L E  + G  LS LP+  ++ L ++  + +  NK TA P       
Sbjct: 126 LEQNLSESFGALIGLKELGLSGNKLSHLPNS-ITLLENLEALHVDENKLTALPE-RIGNL 183

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
             ++ +N   N +  +P   F   +N+  +++K N L S    L T   L  L+L  N++
Sbjct: 184 HKLHVLNAHSNHLTALPSS-FGALRNMQNLDLKKNRLESTGDALATLTKLKFLDLRQNKL 242

Query: 416 SKL-----SEDIQNLV-------------------NLEVLVLSNNLLKKLPSSIGNLRKL 451
           +         D+  +                    ++ VL + +N L  LP++I  L +L
Sbjct: 243 AVFPALPEGADLDQVFLGYNTLSTINETSILRVKDSVTVLDMRDNKLANLPANIACLYRL 302

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
           K LD+  N L  LP  +G+LK L   I+  N L ++ RA+
Sbjct: 303 KTLDVANNDLSDLPPGLGYLKHLNHFIVDGNPLRAIRRAV 342



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 48/276 (17%)

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
           +C+ L + ++   A+ S+ D +   LTS+ +I L++N     P G   +  ++  ++  H
Sbjct: 66  ECIDLVKMDLSHNAIPSISDEI-GGLTSVTSIKLTKNALQVLPEGF-FELHALTYLDLSH 123

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           N++++          NLS+               G  +GL EL L  N++S L   I  L
Sbjct: 124 NELEQ----------NLSE-------------SFGALIGLKELGLSGNKLSHLPNSITLL 160

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
            NLE L +  N L  LP  IGNL KL  L+   N L +LP+  G L+ +Q L L+ N+L 
Sbjct: 161 ENLEALHVDENKLTALPERIGNLHKLHVLNAHSNHLTALPSSFGALRNMQNLDLKKNRLE 220

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPE---------------EIGTLENLHTLYLNDNTC 530
           S   A+  LT L +L + +N L   P                 + T+     L + D+  
Sbjct: 221 STGDALATLTKLKFLDLRQNKLAVFPALPEGADLDQVFLGYNTLSTINETSILRVKDSVT 280

Query: 531 --------LNNIPFELALCSNLQIMSLDNCPLSQIP 558
                   L N+P  +A    L+ + + N  LS +P
Sbjct: 281 VLDMRDNKLANLPANIACLYRLKTLDVANNDLSDLP 316



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 102/181 (56%), Gaps = 16/181 (8%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS- 161
           + +L+LS + +  LP ++ +L  L+ L +  N+L +L   I  + +L  L L +NSL++ 
Sbjct: 413 LFHLNLSSNQLRSLPAAIGELVSLKTLTVEDNELQALDPSIAALPHLELLRLRKNSLSAE 472

Query: 162 -----LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV--HPDIQY 214
                L +S A    L+ LD+R+N L  LP+ + +L SL+ L L FNR++T+   P  Q 
Sbjct: 473 SISEFLGNSPALGDSLKELDVRNNSLATLPVEISQLRSLETLLLGFNRLETLDRFPWSQ- 531

Query: 215 LSNLSMLSMRDNKIRELPPELGELKN---LVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
           L+ +S++S+ DNK+R     LG + +   L +L   +N L ++P E+G C  L  + +  
Sbjct: 532 LTKVSVVSVSDNKLR----ALGRIYDAPLLASLSFENNSLTKVPCELGLCPHLRAIYMNG 587

Query: 272 N 272
           N
Sbjct: 588 N 588



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 142/306 (46%), Gaps = 28/306 (9%)

Query: 92  EKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTC 151
           E   LR K+ ++  LD+  + + +LP ++  L  L+ L +  N L+ LP  +GY+ +L  
Sbjct: 269 ETSILRVKD-SVTVLDMRDNKLANLPANIACLYRLKTLDVANNDLSDLPPGLGYLKHLNH 327

Query: 152 LGLAENSLTSLPDSL--ANLQQLRV-----------LDLRHNKLNELPMVVYKLTSLKIL 198
             +  N L ++  ++  A  + L+            +D+   + +EL +   +  +   +
Sbjct: 328 FIVDGNPLRAIRRAVISAGCESLKKYLRTRGAPPAGVDVLEEERDELQIEREQAAASGTM 387

Query: 199 YLRFNRIKTVHPDI------QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLE 252
            L  N +  + PD+       + S L  L++  N++R LP  +GEL +L TL +  N L+
Sbjct: 388 ILMNNSLNVLPPDLVGQGQFDFGSTLFHLNLSSNQLRSLPAAIGELVSLKTLTVEDNELQ 447

Query: 253 ELPKEIGNCTMLVTLDLQHNELV--NIPDMLGNL----INLTRLRLSYNRLESVPETLSK 306
            L   I     L  L L+ N L   +I + LGN      +L  L +  N L ++P  +S+
Sbjct: 448 ALDPSIAALPHLELLRLRKNSLSAESISEFLGNSPALGDSLKELDVRNNSLATLPVEISQ 507

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
              L    +    L +L     S LT ++ +++S NK  A   G       + S++FE+N
Sbjct: 508 LRSLETLLLGFNRLETLDRFPWSQLTKVSVVSVSDNKLRAL--GRIYDAPLLASLSFENN 565

Query: 367 QIDKIP 372
            + K+P
Sbjct: 566 SLTKVP 571


>gi|149029064|gb|EDL84358.1| rCG63088 [Rattus norvegicus]
          Length = 635

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 215/418 (51%), Gaps = 3/418 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+ S + I+H+P  + +L ++ +L+L  N + SLPS +  +  L  L L +N LT +PDS
Sbjct: 212 LNASYNEISHIPKELLQLGNMRQLFLNSNHIESLPSGLENLRYLETLSLGKNRLTHIPDS 271

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L  L+ L+ L+L +N+L      +  L  L  L L  N I ++  +++ L NL  L M  
Sbjct: 272 LCGLKNLKTLNLEYNQLTIFSKSLCFLPKLVSLNLTGNMIGSLPKEVRELKNLENLLMNH 331

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+  L  E+ +L  +  L LA N LE +  +I N   L  L+L +N L ++P  + + +
Sbjct: 332 NKLTFLAVEIFQLLKIKELHLADNKLEAISPKIENFKELRLLNLDNNLLQSLPKKISHCV 391

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L LS N LE +P+ + K  +L + +     +  + +  +S L+ I+++  S N+ T
Sbjct: 392 NLESLTLSDNNLEELPKKIRKLKNLRQLHANRNKMIKMAEE-ISHLSKIHSLEFSGNQIT 450

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P         +  +   +N I   P G+ +  ++L  ++   N ++ +P+DL     L
Sbjct: 451 HVPI-EIKNCKEITRVELNYNNIMYFPVGLCA-LQSLDYLSFNGNYISEIPVDLSFSKQL 508

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L L  N+I+  SE + +L NLE L L+ N ++K+P  I  +  L  L L +NK E  P
Sbjct: 509 LHLELNKNKITIFSEHLCSLTNLEYLDLAKNQIRKIPHCISAMLSLHVLILSDNKFEIFP 568

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
            E+  LK LQ L +  NQL  +P  I  L  +  L++  NN    P E+  L+ L  L
Sbjct: 569 KELCSLKNLQLLDISENQLHKIPSEISKLKKIQKLNLSNNNFTHFPAELCQLQTLEDL 626



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 194/449 (43%), Gaps = 72/449 (16%)

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVH------------------------PDIQYLSN 217
           L E P+ + K+  +K LYL  N+IKT                           +IQ   N
Sbjct: 149 LQEFPVDIVKVKYVKYLYLDKNQIKTFQGADPGDLLGLETLSLQENGLSSIPQEIQLFHN 208

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L +L+   N+I  +P EL +L N+  L L  NH+E LP  + N   L TL L  N L +I
Sbjct: 209 LKVLNASYNEISHIPKELLQLGNMRQLFLNSNHIESLPSGLENLRYLETLSLGKNRLTHI 268

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           PD L  L NL  L L YN+L    ++L     L   N+ G  + SLP  +   L ++ N+
Sbjct: 269 PDSLCGLKNLKTLNLEYNQLTIFSKSLCFLPKLVSLNLTGNMIGSLPKEV-RELKNLENL 327

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI---------------------- 375
            ++ NK T + +    Q   +  ++   N+++ I   I                      
Sbjct: 328 LMNHNKLT-FLAVEIFQLLKIKELHLADNKLEAISPKIENFKELRLLNLDNNLLQSLPKK 386

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
            S   NL  + + DN L  LP  +     L +L+   N++ K++E+I +L  +  L  S 
Sbjct: 387 ISHCVNLESLTLSDNNLEELPKKIRKLKNLRQLHANRNKMIKMAEEISHLSKIHSLEFSG 446

Query: 436 NLLKKLPSSIGN-----------------------LRKLKCLDLEENKLESLPNEIGFLK 472
           N +  +P  I N                       L+ L  L    N +  +P ++ F K
Sbjct: 447 NQITHVPIEIKNCKEITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDLSFSK 506

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
           +L  L L  N++      +  LTNL YL + +N ++ IP  I  + +LH L L+DN    
Sbjct: 507 QLLHLELNKNKITIFSEHLCSLTNLEYLDLAKNQIRKIPHCISAMLSLHVLILSDNK-FE 565

Query: 533 NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             P EL    NLQ++ +    L +IPSEI
Sbjct: 566 IFPKELCSLKNLQLLDISENQLHKIPSEI 594



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 176/374 (47%), Gaps = 47/374 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L K+ +TH+P S+  L +L+ L L  N+L      + ++  L  L L  N + SLP  
Sbjct: 258 LSLGKNRLTHIPDSLCGLKNLKTLNLEYNQLTIFSKSLCFLPKLVSLNLTGNMIGSLPKE 317

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ------------ 213
           +  L+ L  L + HNKL  L + +++L  +K L+L  N+++ + P I+            
Sbjct: 318 VRELKNLENLLMNHNKLTFLAVEIFQLLKIKELHLADNKLEAISPKIENFKELRLLNLDN 377

Query: 214 -----------YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
                      +  NL  L++ DN + ELP ++ +LKNL  L    N + ++ +EI + +
Sbjct: 378 NLLQSLPKKISHCVNLESLTLSDNNLEELPKKIRKLKNLRQLHANRNKMIKMAEEISHLS 437

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            + +L+   N++ ++P  + N   +TR+ L+YN +   P  L     L+  +  G  +S 
Sbjct: 438 KIHSLEFSGNQITHVPIEIKNCKEITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISE 497

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP---------- 372
           +P  L  S   + ++ L++NK T + S      T++  ++   NQI KIP          
Sbjct: 498 IPVDLSFS-KQLLHLELNKNKITIF-SEHLCSLTNLEYLDLAKNQIRKIPHCISAMLSLH 555

Query: 373 --------YGIFSRA----KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
                   + IF +     KNL  +++ +N L  +P ++     + +LNL  N  +    
Sbjct: 556 VLILSDNKFEIFPKELCSLKNLQLLDISENQLHKIPSEISKLKKIQKLNLSNNNFTHFPA 615

Query: 421 DIQNLVNLEVLVLS 434
           ++  L  LE L +S
Sbjct: 616 ELCQLQTLEDLNIS 629


>gi|405965662|gb|EKC31024.1| Protein lap4 [Crassostrea gigas]
          Length = 1780

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 222/444 (50%), Gaps = 52/444 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F  C  + +  +D    S+T +P  V + T  LEEL L  N+L  LP     +  L  L 
Sbjct: 8   FKACNRQ-VDYIDRRHCSLTDVPDDVLRYTRSLEELLLDANQLKDLPKGFFRLVQLRKLS 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +ANL  L  +D+  N + ++P  +  L +L++L +  N +  +     
Sbjct: 67  LSDNEIARLPPEVANLVNLMEMDISRNDIGDIPENIKFLKNLQVLDISSNPLTKLPEGFT 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL+ L + D  +  LPP++G L NLV+L+L  N ++ LP+ +     L  LDL  N 
Sbjct: 127 QLRNLTHLGLNDISLMRLPPDIGSLTNLVSLELRENMIQFLPQSMSLLVKLEILDLGSNN 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           +  +P+++G+L +L  L L  N L+ +P  +                     G L  LT 
Sbjct: 187 IKELPEIIGSLPSLQELWLDCNELQDLPPEI---------------------GNLRKLTQ 225

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           I+   +S N+ T  P                    D+I  G+    +NL+ + +  N L 
Sbjct: 226 ID---VSENQLTYIP--------------------DEI-CGL----QNLTDLCLSQNDLE 257

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            +P  +G+   L+ L L  N++  L ++I N  +L  L+L+ N L++LPS+IG LR L  
Sbjct: 258 DIPEGIGSLKKLSILKLDQNKLGFLPQEIGNCESLTELILTENYLEELPSTIGRLRLLSN 317

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L+++ N+L+ +P EIG    L  + L+ N+L+ LP+ +G+L  L  L V  N L+ +P  
Sbjct: 318 LNVDRNQLKEIPVEIGQCVRLNVVSLRDNRLLRLPQELGNLKELHVLDVSGNKLEYLPIT 377

Query: 514 IGTLENLHTLYLNDNTCLNNIPFE 537
           I  L +L+ L+L++N     + F+
Sbjct: 378 ITNL-HLNALWLSENQAKPMLKFQ 400



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 126/390 (32%), Positives = 194/390 (49%), Gaps = 28/390 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L ++P  V + T SL+ L L  N++K +      L  L  LS+ DN+I
Sbjct: 13  RQVDYIDRRHCSLTDVPDDVLRYTRSLEELLLDANQLKDLPKGFFRLVQLRKLSLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPPE+  L NL+ +D++ N + ++P+ I     L  LD+  N L  +P+    L NLT
Sbjct: 73  ARLPPEVANLVNLMEMDISRNDIGDIPENIKFLKNLQVLDISSNPLTKLPEGFTQLRNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L  +P                      PD  + SLT++ ++ L  N     P
Sbjct: 133 HLGLNDISLMRLP----------------------PD--IGSLTNLVSLELRENMIQFLP 168

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
               +    +  ++   N I ++P  I     +L ++ +  N L  LP ++G    LT++
Sbjct: 169 QSM-SLLVKLEILDLGSNNIKELPE-IIGSLPSLQELWLDCNELQDLPPEIGNLRKLTQI 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  NQ++ + ++I  L NL  L LS N L+ +P  IG+L+KL  L L++NKL  LP EI
Sbjct: 227 DVSENQLTYIPDEICGLQNLTDLCLSQNDLEDIPEGIGSLKKLSILKLDQNKLGFLPQEI 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + L  LIL  N L  LP  IG L  LS L+V  N L+ IP EIG    L+ + L DN
Sbjct: 287 GNCESLTELILTENYLEELPSTIGRLRLLSNLNVDRNQLKEIPVEIGQCVRLNVVSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L  +P EL     L ++ +    L  +P
Sbjct: 347 RLL-RLPQELGNLKELHVLDVSGNKLEYLP 375



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 183/375 (48%), Gaps = 29/375 (7%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           ++ K F R  +  +  L LS + I  LPP V  L +L E+ +  N +  +P  I ++ NL
Sbjct: 51  DLPKGFFRLVQ--LRKLSLSDNEIARLPPEVANLVNLMEMDISRNDIGDIPENIKFLKNL 108

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
             L ++ N LT LP+    L+ L  L L    L  LP  +  LT+L  L LR N I+ + 
Sbjct: 109 QVLDISSNPLTKLPEGFTQLRNLTHLGLNDISLMRLPPDIGSLTNLVSLELRENMIQFLP 168

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
             +  L  L +L +  N I+ELP  +G L +L  L L  N L++LP EIGN   L  +D+
Sbjct: 169 QSMSLLVKLEILDLGSNNIKELPEIIGSLPSLQELWLDCNELQDLPPEIGNLRKLTQIDV 228

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
             N+L  IPD +  L NLT L LS N LE +PE +     L+   ++   L  LP   + 
Sbjct: 229 SENQLTYIPDEICGLQNLTDLCLSQNDLEDIPEGIGSLKKLSILKLDQNKLGFLPQE-IG 287

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
           +  S+  + L+ N     PS                            R + LS +N+  
Sbjct: 288 NCESLTELILTENYLEELPS-------------------------TIGRLRLLSNLNVDR 322

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
           N L  +P+++G  V L  ++L  N++ +L +++ NL  L VL +S N L+ LP +I NL 
Sbjct: 323 NQLKEIPVEIGQCVRLNVVSLRDNRLLRLPQELGNLKELHVLDVSGNKLEYLPITITNLH 382

Query: 450 KLKCLDLEENKLESL 464
            L  L L EN+ + +
Sbjct: 383 -LNALWLSENQAKPM 396



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 166/349 (47%), Gaps = 56/349 (16%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L++LPK       L  L L  NE+  +P  + NL+NL  + +S N + 
Sbjct: 37  RSLEELLLDANQLKDLPKGFFRLVQLRKLSLSDNEIARLPPEVANLVNLMEMDISRNDIG 96

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQ 354
            +PE +    +L   ++    L+ LP+G   L +LT   +N+I+L R             
Sbjct: 97  DIPENIKFLKNLQVLDISSNPLTKLPEGFTQLRNLTHLGLNDISLMR------------- 143

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
                           +P  I S   NL  + +++N++  LP  +   V L  L+LG+N 
Sbjct: 144 ----------------LPPDIGS-LTNLVSLELRENMIQFLPQSMSLLVKLEILDLGSNN 186

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           I +L E I +L +L+ L L  N L+ LP  IGNLRKL  +D+ EN+L  +P+EI  L+ L
Sbjct: 187 IKELPEIIGSLPSLQELWLDCNELQDLPPEIGNLRKLTQIDVSENQLTYIPDEICGLQNL 246

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN------ 528
             L L  N L  +P  IG L  LS L + +N L  +P+EIG  E+L  L L +N      
Sbjct: 247 TDLCLSQNDLEDIPEGIGSLKKLSILKLDQNKLGFLPQEIGNCESLTELILTENYLEELP 306

Query: 529 ----------------TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                             L  IP E+  C  L ++SL +  L ++P E+
Sbjct: 307 STIGRLRLLSNLNVDRNQLKEIPVEIGQCVRLNVVSLRDNRLLRLPQEL 355


>gi|359484867|ref|XP_002273645.2| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase At1g35710-like [Vitis vinifera]
          Length = 1217

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 168/479 (35%), Positives = 252/479 (52%), Gaps = 26/479 (5%)

Query: 105 NLDLSKSSITH-LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS- 161
           +L+LS ++++  +PPS+  L +L  LYLY NKL  S+P +IG + +L  L L+ N+L+  
Sbjct: 319 DLELSTNNLSGPIPPSIGNLRNLTTLYLYENKLSGSIPHEIGLLRSLNDLELSTNNLSGP 378

Query: 162 LPDSLANLQQLRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKT-VHPDIQYLSNLS 219
           +P S+ NL+ L  L L  NKL+  +P  +  L SL  L L  N +   + P I  L NL+
Sbjct: 379 IPPSIGNLRNLTTLYLYENKLSGSIPHEIGSLRSLNDLVLSTNNLSGPIPPSIGNLRNLT 438

Query: 220 MLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN- 276
            L + +NK+   +P E+G L++L  L L+ N+L   +P  IGN   L TL L  N+L   
Sbjct: 439 TLYLYENKLSGSIPHEIGSLRSLNDLVLSTNNLSGPIPPSIGNLRNLTTLYLYENKLSGF 498

Query: 277 IPDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNV-EGCALSSLPDGLLSSLTSI 334
           IP  +G L NLT L L YN+L   +P+ +   +HL   ++ E      LP  +     ++
Sbjct: 499 IPQEIGLLSNLTHLLLHYNQLNGPIPQEIDNLIHLKSLHLDENNFTGHLPQQMCLG-GAL 557

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK-DNLLT 393
            N T   N FT          TS++ +    NQ+       F    NL+ +++  +NL  
Sbjct: 558 ENFTAMGNNFTGPIPMSLRNCTSLFRVRLNRNQLKGNITEGFGVYPNLNFMDLSSNNLYG 617

Query: 394 SLPLDLGTWVGLTELNLGTNQIS-----KLSEDIQNLVNLEVLVLS-NNLLKKLPSSIGN 447
            L    G    LT LN+  N +S     +L E IQ    L  L LS N+LL K+P  +G 
Sbjct: 618 ELSQKWGQCRSLTSLNISHNNLSGIIPPQLGEAIQ----LHQLDLSSNHLLGKIPRELGR 673

Query: 448 LRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGEN 505
           L  +  L L  N+L   +P E+G L  L+ LIL SN L  S+P+ +G L+ LS+L++ +N
Sbjct: 674 LTSMFNLLLSNNQLSGNIPWEVGNLFNLEHLILASNNLSGSIPKQLGMLSKLSFLNLSKN 733

Query: 506 NL-QSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS-QIPSEIV 562
              +SIP+EIG L +L +L L+ N     IP EL     L+ ++L +  LS  IPS   
Sbjct: 734 EFVESIPDEIGNLHSLQSLDLSQNMLNGKIPQELGELQRLEALNLSHNELSGSIPSTFA 792



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 123/348 (35%), Positives = 172/348 (49%), Gaps = 44/348 (12%)

Query: 212 IQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLVTLDL 269
           +  L++L+ L++  N +R  +PP +G L+NL TL L  N L   +P EIG+   L  L+L
Sbjct: 263 VGLLTSLTFLALTSNHLRGPIPPTIGNLRNLTTLYLDENKLFGSIPHEIGSLRSLNDLEL 322

Query: 270 QHNELVN-IPDMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGL 327
             N L   IP  +GNL NLT L L  N+L  S+P  +                     GL
Sbjct: 323 STNNLSGPIPPSIGNLRNLTTLYLYENKLSGSIPHEI---------------------GL 361

Query: 328 LSSLTSINNITLSRNKFTA--YPS-GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
           L SL   N++ LS N  +    PS G     T++Y   +E+     IP+ I S       
Sbjct: 362 LRSL---NDLELSTNNLSGPIPPSIGNLRNLTTLYL--YENKLSGSIPHEIGSLRSLNDL 416

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVLS-NNLLKKLP 442
           V   +NL   +P  +G    LT L L  N++S  +  +I +L +L  LVLS NNL   +P
Sbjct: 417 VLSTNNLSGPIPPSIGNLRNLTTLYLYENKLSGSIPHEIGSLRSLNDLVLSTNNLSGPIP 476

Query: 443 SSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYL 500
            SIGNLR L  L L ENKL   +P EIG L  L  L+L  NQL   +P+ I +L +L  L
Sbjct: 477 PSIGNLRNLTTLYLYENKLSGFIPQEIGLLSNLTHLLLHYNQLNGPIPQEIDNLIHLKSL 536

Query: 501 SVGENNLQS-IPEEI---GTLENLHTLYLNDNTCLNNIPFELALCSNL 544
            + ENN    +P+++   G LEN   +    N     IP  L  C++L
Sbjct: 537 HLDENNFTGHLPQQMCLGGALENFTAM---GNNFTGPIPMSLRNCTSL 581



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 134/293 (45%), Gaps = 54/293 (18%)

Query: 254 LPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +P ++G  T L  L L  N L   IP  +GNL NLT L L  N+L               
Sbjct: 259 IPYQVGLLTSLTFLALTSNHLRGPIPPTIGNLRNLTTLYLDENKL--------------- 303

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
                    S+P  +  SL S+N++ LS N  +     GP                  IP
Sbjct: 304 -------FGSIPHEI-GSLRSLNDLELSTNNLS-----GP------------------IP 332

Query: 373 YGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQISK-LSEDIQNLVNLEV 430
             I    +NL+ + + +N L+ S+P ++G    L +L L TN +S  +   I NL NL  
Sbjct: 333 PSI-GNLRNLTTLYLYENKLSGSIPHEIGLLRSLNDLELSTNNLSGPIPPSIGNLRNLTT 391

Query: 431 LVL-SNNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQLV-SL 487
           L L  N L   +P  IG+LR L  L L  N L   +P  IG L+ L  L L  N+L  S+
Sbjct: 392 LYLYENKLSGSIPHEIGSLRSLNDLVLSTNNLSGPIPPSIGNLRNLTTLYLYENKLSGSI 451

Query: 488 PRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
           P  IG L +L+ L +  NNL   IP  IG L NL TLYL +N     IP E+ 
Sbjct: 452 PHEIGSLRSLNDLVLSTNNLSGPIPPSIGNLRNLTTLYLYENKLSGFIPQEIG 504



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 68/134 (50%), Gaps = 4/134 (2%)

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQLV-SLPR 489
           V SN+    +P  +G L  L  L L  N L   +P  IG L+ L  L L  N+L  S+P 
Sbjct: 250 VHSNSFSGLIPYQVGLLTSLTFLALTSNHLRGPIPPTIGNLRNLTTLYLDENKLFGSIPH 309

Query: 490 AIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMS 548
            IG L +L+ L +  NNL   IP  IG L NL TLYL +N    +IP E+ L  +L  + 
Sbjct: 310 EIGSLRSLNDLELSTNNLSGPIPPSIGNLRNLTTLYLYENKLSGSIPHEIGLLRSLNDLE 369

Query: 549 LDNCPLSQ-IPSEI 561
           L    LS  IP  I
Sbjct: 370 LSTNNLSGPIPPSI 383


>gi|167379285|ref|XP_001735078.1| oligodendrocyte-myelin glycoprotein precursor [Entamoeba dispar
           SAW760]
 gi|165903118|gb|EDR28771.1| oligodendrocyte-myelin glycoprotein precursor, putative [Entamoeba
           dispar SAW760]
          Length = 508

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 238/476 (50%), Gaps = 14/476 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +++S  +++  P  + K           N   S+P  +  + NL  L L+ N +TS+PDS
Sbjct: 21  IEISGKNLSEFPKQISKCV-CTNFNASQNDFTSIPEDVCIMPNLEVLTLSNNRITSIPDS 79

Query: 166 LANLQQLRVLDLRHNKL--NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           +     LR L L  N L  + +   +   ++L+ L +  N+++++ P+I  L +L  L++
Sbjct: 80  IQKASNLRELYLGQNNLFYDGISSEIKMCSNLQRLDISMNKLESIPPEIGSLLSLQYLNI 139

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
            +N ++ LPPE+G L  L TL +  N + +LP EIGN   L  LDL +N++  +P+ L N
Sbjct: 140 SENNLKSLPPEIGMLDKLQTLLVNKNSIRKLPTEIGNLRSLYELDLSNNQMDLLPEELSN 199

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVE-GCALSSLPDGLLSSLTSINNITLSRN 342
           +I L  LR+ +N+L    + L+    L E + +    +  LP   L SL ++  + +   
Sbjct: 200 MIALKILRIGFNKLSGNIDVLTNFKFLVELDCQNNQGILELPP--LDSLQNLTRLVVKNL 257

Query: 343 KFTAYPSGGPTQFTSVYSINFEHN-QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
             T+ P  G +    +  +N   N ++  +P  IF+ A  L +++     +T LP ++ +
Sbjct: 258 PITSIP--GLSSLKMLCELNVRDNIKMKGMPEEIFNIAS-LQRLDFVGCNITVLPPNITS 314

Query: 402 WVGLTELNLGTNQI--SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
              L  L L  N +  S   E I  L N+  L +SNN +   P  + +L  +  LD+  N
Sbjct: 315 LTNLNILELAHNSLNESSFPEGISTLTNITKLSISNNQIHSYPQCLCDLTSIVDLDVSNN 374

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
            +  LP     L  +Q L +  N+L  LP ++G L +++YL    N L+S+P  IG L  
Sbjct: 375 LMVELPETFSNLTNVQNLTIAGNRLNRLPESLGRLISVTYLDARNNQLKSLPPSIGDLRQ 434

Query: 520 LHTLYLNDNTCLNNIPFELA-LCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
           L+ L L  N  +  +P E+  L   LQ + L N PL   P E+VV G   I +YLK
Sbjct: 435 LNRLELTQNM-IPVLPVEMGQLDGILQTIELTNNPLVVPPKEVVVKGAHEICQYLK 489



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 152/305 (49%), Gaps = 34/305 (11%)

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L+N + + +S   L   P+ +SKCV  N FN      +S+P+  +  + ++  +TLS N+
Sbjct: 15  LLNQSSIEISGKNLSEFPKQISKCVCTN-FNASQNDFTSIPED-VCIMPNLEVLTLSNNR 72

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK---NLSKVNMKDNLLTSLPLDLG 400
            T+ P     + +++  +    N +     GI S  K   NL ++++  N L S+P ++G
Sbjct: 73  ITSIPD-SIQKASNLRELYLGQNNL--FYDGISSEIKMCSNLQRLDISMNKLESIPPEIG 129

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
           + + L  LN+  N +  L  +I  L  L+ L+++ N ++KLP+ IGNLR L  LDL  N+
Sbjct: 130 SLLSLQYLNISENNLKSLPPEIGMLDKLQTLLVNKNSIRKLPTEIGNLRSLYELDLSNNQ 189

Query: 461 LESLPNE-----------IGF------------LKELQRLILQSNQ-LVSLPRAIGHLTN 496
           ++ LP E           IGF             K L  L  Q+NQ ++ LP  +  L N
Sbjct: 190 MDLLPEELSNMIALKILRIGFNKLSGNIDVLTNFKFLVELDCQNNQGILELP-PLDSLQN 248

Query: 497 LSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ 556
           L+ L V    + SIP  + +L+ L  L + DN  +  +P E+   ++LQ +    C ++ 
Sbjct: 249 LTRLVVKNLPITSIP-GLSSLKMLCELNVRDNIKMKGMPEEIFNIASLQRLDFVGCNITV 307

Query: 557 IPSEI 561
           +P  I
Sbjct: 308 LPPNI 312



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 58/98 (59%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   +I++LD+S + +  LP +   LT+++ L + GN+L  LP  +G + ++T L    N
Sbjct: 361 CDLTSIVDLDVSNNLMVELPETFSNLTNVQNLTIAGNRLNRLPESLGRLISVTYLDARNN 420

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
            L SLP S+ +L+QL  L+L  N +  LP+ + +L  +
Sbjct: 421 QLKSLPPSIGDLRQLNRLELTQNMIPVLPVEMGQLDGI 458


>gi|428176940|gb|EKX45822.1| hypothetical protein GUITHDRAFT_58686, partial [Guillardia theta
           CCMP2712]
          Length = 417

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 213/420 (50%), Gaps = 10/420 (2%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           L   +++ T +  L +  N+++ LP Q   +TNLT L   +N L +L   +  L+QL +L
Sbjct: 1   LQTKIDEFTSVTSLNISCNQISGLPLQFFNLTNLTVLKSHQNQLKNLLPEIYKLRQLEIL 60

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
            L  NKL  LP  + +L  ++ + L  N ++ +     +L++L  + +++N     P ++
Sbjct: 61  WLHQNKLRSLPSTIGQLDRVRQMTLEDNMLEALPTHFIFLTSLKEIRLQNNPYLSPPKDI 120

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
            +L +L  LDL+ N+LE +P  +G    L +L+L+ N + ++PD   +L+NL  L L+YN
Sbjct: 121 AKLSSLRRLDLSVNNLEFVPATMGRLIDLSSLNLRQNNIQSLPDTFSDLMNLRILVLTYN 180

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
           ++  +P++ SK   L E  +    L  + D    S+  +  I L+ N+    P    +  
Sbjct: 181 QISQLPQSFSKVSSLWELELSYNNLRDVSDS-FRSMARLKRINLNSNRLLTIPKTL-SLC 238

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
             + ++    NQ+  IP  +  +   + ++N+  NLL ++P  +   V L  LNL +N +
Sbjct: 239 LELETLTATSNQLKIIPSNLL-KFPAMKEINLSQNLLETVPPSIQAMVSLRVLNLESNNL 297

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
               E I  L  LE + LS N ++ +PS + +L  L  LD+ +N L ++  EI FL  L+
Sbjct: 298 KVFDEKICFLNMLESVNLSRNFIRCIPSEVQSLTNLTMLDISQNHLSAIAPEIRFLTRLR 357

Query: 476 RLILQSNQL-------VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            L+L  N L             +G + NL  L +G N L ++P ++    NL ++ L  N
Sbjct: 358 HLLLADNSLKFFPPFPPCFSPVLGLMENLRELDLGRNQLSALPLDLSRCSNLQSIKLQSN 417



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 202/404 (50%), Gaps = 32/404 (7%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           L++  N+++ LP+  + LT+L +L    N++K + P+I  L  L +L +  NK+R LP  
Sbjct: 14  LNISCNQISGLPLQFFNLTNLTVLKSHQNQLKNLLPEIYKLRQLEILWLHQNKLRSLPST 73

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
           +G+L  +  + L  N LE LP      T L  + LQ+N  ++ P  +  L +L RL LS 
Sbjct: 74  IGQLDRVRQMTLEDNMLEALPTHFIFLTSLKEIRLQNNPYLSPPKDIAKLSSLRRLDLSV 133

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
           N LE VP T+ + + L+  N+    + SLPD   S L ++  + L+ N+ +  P    ++
Sbjct: 134 NNLEFVPATMGRLIDLSSLNLRQNNIQSLPDTF-SDLMNLRILVLTYNQISQLPQSF-SK 191

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
            +S++ +   +N +  +     S A+ L ++N+  N L ++P  L   + L  L   +NQ
Sbjct: 192 VSSLWELELSYNNLRDVSDSFRSMAR-LKRINLNSNRLLTIPKTLSLCLELETLTATSNQ 250

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +  +  ++     ++ + LS NLL+ +P SI  +  L+ L+LE N L+    +I FL  L
Sbjct: 251 LKIIPSNLLKFPAMKEINLSQNLLETVPPSIQAMVSLRVLNLESNNLKVFDEKICFLNML 310

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC---- 530
           + + L  N +  +P  +  LTNL+ L + +N+L +I  EI  L  L  L L DN+     
Sbjct: 311 ESVNLSRNFIRCIPSEVQSLTNLTMLDISQNHLSAIAPEIRFLTRLRHLLLADNSLKFFP 370

Query: 531 -------------------------LNNIPFELALCSNLQIMSL 549
                                    L+ +P +L+ CSNLQ + L
Sbjct: 371 PFPPCFSPVLGLMENLRELDLGRNQLSALPLDLSRCSNLQSIKL 414



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 105/200 (52%), Gaps = 2/200 (1%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
              N++  +P  I  +   + ++ ++DN+L +LP        L E+ L  N      +DI
Sbjct: 62  LHQNKLRSLPSTI-GQLDRVRQMTLEDNMLEALPTHFIFLTSLKEIRLQNNPYLSPPKDI 120

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L +L  L LS N L+ +P+++G L  L  L+L +N ++SLP+    L  L+ L+L  N
Sbjct: 121 AKLSSLRRLDLSVNNLEFVPATMGRLIDLSSLNLRQNNIQSLPDTFSDLMNLRILVLTYN 180

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           Q+  LP++   +++L  L +  NNL+ + +   ++  L  + LN N  L  IP  L+LC 
Sbjct: 181 QISQLPQSFSKVSSLWELELSYNNLRDVSDSFRSMARLKRINLNSNRLLT-IPKTLSLCL 239

Query: 543 NLQIMSLDNCPLSQIPSEIV 562
            L+ ++  +  L  IPS ++
Sbjct: 240 ELETLTATSNQLKIIPSNLL 259



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 133/291 (45%), Gaps = 8/291 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS +++  +P ++ +L  L  L L  N + SLP     + NL  L L  N ++ LP S
Sbjct: 129 LDLSVNNLEFVPATMGRLIDLSSLNLRQNNIQSLPDTFSDLMNLRILVLTYNQISQLPQS 188

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
            + +  L  L+L +N L ++      +  LK + L  NR+ T+   +     L  L+   
Sbjct: 189 FSKVSSLWELELSYNNLRDVSDSFRSMARLKRINLNSNRLLTIPKTLSLCLELETLTATS 248

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+++ +P  L +   +  ++L+ N LE +P  I     L  L+L+ N L    + +  L 
Sbjct: 249 NQLKIIPSNLLKFPAMKEINLSQNLLETVPPSIQAMVSLRVLNLESNNLKVFDEKICFLN 308

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  + LS N +  +P  +    +L   ++    LS++    +  LT + ++ L+ N   
Sbjct: 309 MLESVNLSRNFIRCIPSEVQSLTNLTMLDISQNHLSAIAPE-IRFLTRLRHLLLADNSLK 367

Query: 346 AYPSGGPTQ------FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
            +P   P          ++  ++   NQ+  +P  + SR  NL  + ++ N
Sbjct: 368 FFPPFPPCFSPVLGLMENLRELDLGRNQLSALPLDL-SRCSNLQSIKLQSN 417



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 24/160 (15%)

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
           +  +T LN+  NQIS L     NL NL VL    N LK L   I  LR+L+ L L +NKL
Sbjct: 8   FTSVTSLNISCNQISGLPLQFFNLTNLTVLKSHQNQLKNLLPEIYKLRQLEILWLHQNKL 67

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
            S                       LP  IG L  +  +++ +N L+++P     L +L 
Sbjct: 68  RS-----------------------LPSTIGQLDRVRQMTLEDNMLEALPTHFIFLTSLK 104

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            + L +N  L+  P ++A  S+L+ + L    L  +P+ +
Sbjct: 105 EIRLQNNPYLSP-PKDIAKLSSLRRLDLSVNNLEFVPATM 143


>gi|417781513|ref|ZP_12429262.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778244|gb|EKR62873.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 348

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 115/320 (35%), Positives = 169/320 (52%), Gaps = 3/320 (0%)

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
           +   +Q  S + +L +   ++  LP E+G  +NL  L L  N L  +PKEIG    L TL
Sbjct: 9   LEKSLQNPSEVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETL 68

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
            L  N L  IP+ +  L NL  L L  N+L+ +P  + K  +L E N+ G  L+ LP  +
Sbjct: 69  ILAENILKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQLTVLPPSI 128

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
              L ++  + L RN+    P        S+  +N   N+I  +P  I S+  NL  +++
Sbjct: 129 -GQLQNLEILELFRNQLATLPEE-IVGLKSLQILNLFENEIKSLPKEI-SQLSNLIWLDL 185

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
             N +  L LD      L  LNL  N++     DI  L +LE L L+ N  K LP  I  
Sbjct: 186 GKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQ 245

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           L  L+ L+L  N+L SLP  IG L++L+ L L+ N+L +LP+ I HL +L  + + +N L
Sbjct: 246 LENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIEHLRSLKIVHLEQNRL 305

Query: 508 QSIPEEIGTLENLHTLYLND 527
            +IPEEIG+L+NL  LYL D
Sbjct: 306 TAIPEEIGSLQNLKELYLQD 325



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 168/305 (55%), Gaps = 3/305 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD+S   +  LP  +    +LE+L L+GN+L ++P +IG + NL  L LAEN L ++P+ 
Sbjct: 22  LDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETLILAENILKTIPNE 81

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L  LDL  NKL  LP  + KL +LK L L  N++  + P I  L NL +L +  
Sbjct: 82  IEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELFR 141

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E+  LK+L  L+L  N ++ LPKEI   + L+ LDL  N++  +      L 
Sbjct: 142 NQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQ 201

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+LE+ P  + +   L   N+       LP+ +L  L ++  + L+ N+ T
Sbjct: 202 NLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEIL-QLENLQVLELTGNQLT 260

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P  G  +   + S+  E N++  +P GI    ++L  V+++ N LT++P ++G+   L
Sbjct: 261 SLPE-GIGRLEKLESLFLEGNRLTTLPKGI-EHLRSLKIVHLEQNRLTAIPEEIGSLQNL 318

Query: 406 TELNL 410
            EL L
Sbjct: 319 KELYL 323



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/264 (36%), Positives = 146/264 (55%), Gaps = 3/264 (1%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L L+++ +  +P  +E+L +L  L LY NKL  LP++IG + NL  L L+ N LT 
Sbjct: 64  NLETLILAENILKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQLTV 123

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP S+  LQ L +L+L  N+L  LP  +  L SL+IL L  N IK++  +I  LSNL  L
Sbjct: 124 LPPSIGQLQNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWL 183

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  NKI+ L  +   L+NL +L+L  N LE  P +I     L  L+L +N    +P+ +
Sbjct: 184 DLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEI 243

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL  L L+ N+L S+PE + +   L    +EG  L++LP G +  L S+  + L +
Sbjct: 244 LQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKG-IEHLRSLKIVHLEQ 302

Query: 342 NKFTAYPS--GGPTQFTSVYSINF 363
           N+ TA P   G       +Y  +F
Sbjct: 303 NRLTAIPEEIGSLQNLKELYLQDF 326



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 132/225 (58%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL ++ +  LP  + KL +L+EL L GN+L  LP  IG + NL  L L  N L 
Sbjct: 86  QNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQLA 145

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  L+ L++L+L  N++  LP  + +L++L  L L  N+IK +  D + L NL  
Sbjct: 146 TLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKS 205

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++ DNK+   P ++ +LK+L  L+L +N  + LP+EI     L  L+L  N+L ++P+ 
Sbjct: 206 LNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEG 265

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
           +G L  L  L L  NRL ++P+ +     L   ++E   L+++P+
Sbjct: 266 IGRLEKLESLFLEGNRLTTLPKGIEHLRSLKIVHLEQNRLTAIPE 310



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 128/221 (57%), Gaps = 5/221 (2%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K EN+  L+LS + +T LPPS+ +L +LE L L+ N+LA+LP +I  + +L  L L EN 
Sbjct: 107 KLENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQLATLPEEIVGLKSLQILNLFENE 166

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           + SLP  ++ L  L  LDL  NK+  L +   +L +LK L L  N+++    DI  L +L
Sbjct: 167 IKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSL 226

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L++  N+ + LP E+ +L+NL  L+L  N L  LP+ IG    L +L L+ N L  +P
Sbjct: 227 EFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLP 286

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLS-----KCVHLNEFN 314
             + +L +L  + L  NRL ++PE +      K ++L +FN
Sbjct: 287 KGIEHLRSLKIVHLEQNRLTAIPEEIGSLQNLKELYLQDFN 327



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 154/314 (49%), Gaps = 30/314 (9%)

Query: 248 HNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKC 307
           HN+LE   K + N + +  LD+   EL  +P+ +G   NL +L L  NRL ++P+ + K 
Sbjct: 6   HNNLE---KSLQNPSEVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKL 62

Query: 308 VHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQ 367
            +L    +    L ++P+ +   L ++  + L  NK    P                 N+
Sbjct: 63  RNLETLILAENILKTIPNEI-EQLQNLATLDLYENKLKVLP-----------------NE 104

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
           I K+        +NL ++N+  N LT LP  +G    L  L L  NQ++ L E+I  L +
Sbjct: 105 IGKL--------ENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQLATLPEEIVGLKS 156

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           L++L L  N +K LP  I  L  L  LDL +NK++ L  +   L+ L+ L L  N+L + 
Sbjct: 157 LQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENF 216

Query: 488 PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIM 547
           P  I  L +L +L++  N  + +PEEI  LENL  L L  N  L ++P  +     L+ +
Sbjct: 217 PADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQ-LTSLPEGIGRLEKLESL 275

Query: 548 SLDNCPLSQIPSEI 561
            L+   L+ +P  I
Sbjct: 276 FLEGNRLTTLPKGI 289



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 114/197 (57%), Gaps = 2/197 (1%)

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           N++  IP  I  + +NL  + + +N+L ++P ++     L  L+L  N++  L  +I  L
Sbjct: 50  NRLTAIPKEI-GKLRNLETLILAENILKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKL 108

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
            NL+ L LS N L  LP SIG L+ L+ L+L  N+L +LP EI  LK LQ L L  N++ 
Sbjct: 109 ENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIK 168

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
           SLP+ I  L+NL +L +G+N ++ +  +   L+NL +L L DN  L N P ++    +L+
Sbjct: 169 SLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNK-LENFPADIVQLKSLE 227

Query: 546 IMSLDNCPLSQIPSEIV 562
            ++L+      +P EI+
Sbjct: 228 FLNLNYNRFKILPEEIL 244



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 9/143 (6%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L+L  + + + P  + +L  LE L L  N+   LP +I  + NL  L L  N LT
Sbjct: 201 QNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLT 260

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP+ +  L++L  L L  N+L  LP  +  L SLKI++L  NR+  +  +I  L NL  
Sbjct: 261 SLPEGIGRLEKLESLFLEGNRLTTLPKGIEHLRSLKIVHLEQNRLTAIPEEIGSLQNLKE 320

Query: 221 LSMRD---------NKIRELPPE 234
           L ++D          KIR L P+
Sbjct: 321 LYLQDFNSFSEKEKEKIRRLLPK 343


>gi|374990821|ref|YP_004966316.1| small GTP-binding protein domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
 gi|297161473|gb|ADI11185.1| small GTP-binding protein domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 370

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 128/412 (31%), Positives = 194/412 (47%), Gaps = 64/412 (15%)

Query: 79  TKKKEPIQADLNIEKEFLRCKEENIL--------NLDLSKSSITHLPPSVEKLTHLEELY 130
           ++  EP + D + +   L   EE I         +L+L   S+  +P  + + T L  L 
Sbjct: 2   SEYDEPFEMDDDDDSFALEDAEELIAQVIDDGDTSLELGHLSLPVVPALLAEATALTRLD 61

Query: 131 LYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVY 190
           L       +P  +G +T LT L L++N L  LP+SL NL  L    L  N+L ++P+ V 
Sbjct: 62  LSDGTFTEVPDFLGDLTGLTHLSLSDNRLEELPESLGNLSALTEFVLNGNRLAQIPIWVR 121

Query: 191 KLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
           +LT                        L+ L++RDNK+ ELP  LG LK L +LD+  N 
Sbjct: 122 QLT-----------------------ELTDLALRDNKLTELPEFLGGLKKLASLDVGSNR 158

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           +  +P  +G+   L  LDL  N LV IP  LG L  LT L L +NRL  +P +L +  +L
Sbjct: 159 ISAVPSSLGDLAALSELDLSGNRLVEIPRTLGKLTALTELNLDFNRLAELPASLGELANL 218

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP--SGGPTQFTSVYSINFEHNQI 368
           +   +    L+ LP   LS LT++  + L RN+ T  P  +GG   FT++  IN   N+ 
Sbjct: 219 SHLLLGSNRLTRLP-AELSGLTALRWLNLDRNELTELPPWAGG---FTALTGINLGFNR- 273

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
                                  LT+LP  LG    LT L+L  N++++L   +  L  L
Sbjct: 274 -----------------------LTALPETLGGLTALTSLSLRGNRLTELPASMAGLTAL 310

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQ 480
             L L +N L  LP+ +G+L  L  L L+ N+    P    +L + +RL++ 
Sbjct: 311 TSLDLGDNELTDLPAWVGDLPALTSLRLDGNRFSHAPR---WLADHERLVVH 359



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 108/319 (33%), Positives = 161/319 (50%), Gaps = 8/319 (2%)

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
            +L+L H  L  +P  +   T L  LDL       +PD LG+L  LT L LS NRLE +P
Sbjct: 35  TSLELGHLSLPVVPALLAEATALTRLDLSDGTFTEVPDFLGDLTGLTHLSLSDNRLEELP 94

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVY 359
           E+L     L EF + G  L+ +P   +  LT + ++ L  NK T  P   GG      + 
Sbjct: 95  ESLGNLSALTEFVLNGNRLAQIPI-WVRQLTELTDLALRDNKLTELPEFLGG---LKKLA 150

Query: 360 SINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS 419
           S++   N+I  +P  +   A  LS++++  N L  +P  LG    LTELNL  N++++L 
Sbjct: 151 SLDVGSNRISAVPSSLGDLAA-LSELDLSGNRLVEIPRTLGKLTALTELNLDFNRLAELP 209

Query: 420 EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLIL 479
             +  L NL  L+L +N L +LP+ +  L  L+ L+L+ N+L  LP   G    L  + L
Sbjct: 210 ASLGELANLSHLLLGSNRLTRLPAELSGLTALRWLNLDRNELTELPPWAGGFTALTGINL 269

Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
             N+L +LP  +G LT L+ LS+  N L  +P  +  L  L +L L DN  L ++P  + 
Sbjct: 270 GFNRLTALPETLGGLTALTSLSLRGNRLTELPASMAGLTALTSLDLGDNE-LTDLPAWVG 328

Query: 540 LCSNLQIMSLDNCPLSQIP 558
               L  + LD    S  P
Sbjct: 329 DLPALTSLRLDGNRFSHAP 347



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 169/353 (47%), Gaps = 49/353 (13%)

Query: 139 LPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL 198
           +P+ +   T LT L L++ + T +PD L +L  L  L L  N+L ELP  +  L++L   
Sbjct: 47  VPALLAEATALTRLDLSDGTFTEVPDFLGDLTGLTHLSLSDNRLEELPESLGNLSALTEF 106

Query: 199 YLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
            L  NR+  +   ++ L+ L+ L++RDNK                       L ELP+ +
Sbjct: 107 VLNGNRLAQIPIWVRQLTELTDLALRDNK-----------------------LTELPEFL 143

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
           G    L +LD+  N +  +P  LG+L  L+ L LS NRL  +P TL K   L E N++  
Sbjct: 144 GGLKKLASLDVGSNRISAVPSSLGDLAALSELDLSGNRLVEIPRTLGKLTALTELNLDFN 203

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
            L+ LP  L   L +++++ L  N+ T  P+    + + + ++ +               
Sbjct: 204 RLAELPASL-GELANLSHLLLGSNRLTRLPA----ELSGLTALRW--------------- 243

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
                 +N+  N LT LP   G +  LT +NLG N+++ L E +  L  L  L L  N L
Sbjct: 244 ------LNLDRNELTELPPWAGGFTALTGINLGFNRLTALPETLGGLTALTSLSLRGNRL 297

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            +LP+S+  L  L  LDL +N+L  LP  +G L  L  L L  N+    PR +
Sbjct: 298 TELPASMAGLTALTSLDLGDNELTDLPAWVGDLPALTSLRLDGNRFSHAPRWL 350



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 151/320 (47%), Gaps = 4/320 (1%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
           + L+ L + D    E+P  LG+L  L  L L+ N LEELP+ +GN + L    L  N L 
Sbjct: 55  TALTRLDLSDGTFTEVPDFLGDLTGLTHLSLSDNRLEELPESLGNLSALTEFVLNGNRLA 114

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            IP  +  L  LT L L  N+L  +PE L     L   +V    +S++P  L   L +++
Sbjct: 115 QIPIWVRQLTELTDLALRDNKLTELPEFLGGLKKLASLDVGSNRISAVPSSL-GDLAALS 173

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + LS N+    P     + T++  +N + N++ ++P  +   A NLS + +  N LT L
Sbjct: 174 ELDLSGNRLVEIPRT-LGKLTALTELNLDFNRLAELPASLGELA-NLSHLLLGSNRLTRL 231

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P +L     L  LNL  N++++L         L  + L  N L  LP ++G L  L  L 
Sbjct: 232 PAELSGLTALRWLNLDRNELTELPPWAGGFTALTGINLGFNRLTALPETLGGLTALTSLS 291

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L  N+L  LP  +  L  L  L L  N+L  LP  +G L  L+ L +  N     P  + 
Sbjct: 292 LRGNRLTELPASMAGLTALTSLDLGDNELTDLPAWVGDLPALTSLRLDGNRFSHAPRWLA 351

Query: 516 TLENLHTLYLNDNTCLNNIP 535
             E L  ++L +   L N P
Sbjct: 352 DHERL-VVHLGEGRVLRNDP 370



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 118/226 (52%), Gaps = 5/226 (2%)

Query: 94  EFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLG 153
           EFL   ++ + +LD+  + I+ +P S+  L  L EL L GN+L  +P  +G +T LT L 
Sbjct: 141 EFLGGLKK-LASLDVGSNRISAVPSSLGDLAALSELDLSGNRLVEIPRTLGKLTALTELN 199

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L  N L  LP SL  L  L  L L  N+L  LP  +  LT+L+ L L  N +  + P   
Sbjct: 200 LDFNRLAELPASLGELANLSHLLLGSNRLTRLPAELSGLTALRWLNLDRNELTELPPWAG 259

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
             + L+ +++  N++  LP  LG L  L +L L  N L ELP  +   T L +LDL  NE
Sbjct: 260 GFTALTGINLGFNRLTALPETLGGLTALTSLSLRGNRLTELPASMAGLTALTSLDLGDNE 319

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSK----CVHLNEFNV 315
           L ++P  +G+L  LT LRL  NR    P  L+      VHL E  V
Sbjct: 320 LTDLPAWVGDLPALTSLRLDGNRFSHAPRWLADHERLVVHLGEGRV 365



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 110/202 (54%), Gaps = 2/202 (0%)

Query: 360 SINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS 419
           S+   H  +  +P  + + A  L+++++ D   T +P  LG   GLT L+L  N++ +L 
Sbjct: 36  SLELGHLSLPVVP-ALLAEATALTRLDLSDGTFTEVPDFLGDLTGLTHLSLSDNRLEELP 94

Query: 420 EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLIL 479
           E + NL  L   VL+ N L ++P  +  L +L  L L +NKL  LP  +G LK+L  L +
Sbjct: 95  ESLGNLSALTEFVLNGNRLAQIPIWVRQLTELTDLALRDNKLTELPEFLGGLKKLASLDV 154

Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
            SN++ ++P ++G L  LS L +  N L  IP  +G L  L  L L+ N  L  +P  L 
Sbjct: 155 GSNRISAVPSSLGDLAALSELDLSGNRLVEIPRTLGKLTALTELNLDFNR-LAELPASLG 213

Query: 540 LCSNLQIMSLDNCPLSQIPSEI 561
             +NL  + L +  L+++P+E+
Sbjct: 214 ELANLSHLLLGSNRLTRLPAEL 235



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 1/155 (0%)

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           G T L LG   +  +   +     L  L LS+    ++P  +G+L  L  L L +N+LE 
Sbjct: 33  GDTSLELGHLSLPVVPALLAEATALTRLDLSDGTFTEVPDFLGDLTGLTHLSLSDNRLEE 92

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           LP  +G L  L   +L  N+L  +P  +  LT L+ L++ +N L  +PE +G L+ L +L
Sbjct: 93  LPESLGNLSALTEFVLNGNRLAQIPIWVRQLTELTDLALRDNKLTELPEFLGGLKKLASL 152

Query: 524 YLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            +  N  ++ +P  L   + L  + L    L +IP
Sbjct: 153 DVGSNR-ISAVPSSLGDLAALSELDLSGNRLVEIP 186


>gi|403268883|ref|XP_003926491.1| PREDICTED: leucine-rich repeat-containing protein 1 [Saimiri
           boliviensis boliviensis]
          Length = 547

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 180/363 (49%), Gaps = 29/363 (7%)

Query: 198 LYLRFNRIKTVHPDIQY--LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           ++    +  TV    Q+  L  L  L + DN+I+ LPPE+     LV LD++ N + E+P
Sbjct: 62  IFWGVTQEWTVWVGWQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIP 121

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
           + I  C  L   D   N L+ +P     L NLT L ++   L+S+PE +    +L    +
Sbjct: 122 ESISFCKALQIADFSGNPLMRLPKSFPELENLTCLSVNDVSLQSLPENIGNLYNLTSLEL 181

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
               L+ LPD L                         TQ   +  ++  +N+I  +P  I
Sbjct: 182 RENLLTYLPDSL-------------------------TQLRRLEELDLGNNEIHSLPESI 216

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
            +    L  + +  N L+ LP ++G    L  L++  N++ +L E+I  L +L  LV+S 
Sbjct: 217 GALL-CLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQ 275

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           NLL+ +P  IG L+KL  L +++N+L  LP  +G  + L  L+L  NQL++LP++IG L 
Sbjct: 276 NLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLK 335

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            LS L+   N L S+P+EIG   +L    L DN  L  IP E++  + L ++ L    L 
Sbjct: 336 KLSNLNADRNKLVSLPKEIGGCCSLTVFCLRDNR-LTRIPAEVSQATELHVLDLAGNRLL 394

Query: 556 QIP 558
            +P
Sbjct: 395 HLP 397



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 112/314 (35%), Positives = 165/314 (52%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 107 LVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRLPKSFPELENLTCLSVNDVSLQSL 166

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I ++   I  L  L  L 
Sbjct: 167 PENIGNLYNLTSLELRENLLTYLPDSLTQLRRLEELDLGNNEIHSLPESIGALLCLKDLW 226

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 227 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIG 286

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE +  C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 287 KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKS-IGKLKKLSNLNADRN 345

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 346 KLVSLPKEIGGCCSLT-VFCL--RDNRLTRIPAEV-SQATELHVLDLAGNRLLHLPLSL- 400

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 401 TALKLKALWLSDNQ 414



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 176/343 (51%), Gaps = 4/343 (1%)

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
           +L  L +L L  N++  LP +I     L  L ++ N +  +P+S++  + L++ D   N 
Sbjct: 80  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNP 139

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L  LP    +L +L  L +    ++++  +I  L NL+ L +R+N +  LP  L +L+ L
Sbjct: 140 LMRLPKSFPELENLTCLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLRRL 199

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
             LDL +N +  LP+ IG    L  L L  N+L  +P  +GNL NL  L +S NRLE +P
Sbjct: 200 EELDLGNNEIHSLPESIGALLCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLP 259

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
           E +S    L +  +    L ++PDG +  L  ++ + + +N+ T  P        S+  +
Sbjct: 260 EEISGLTSLTDLVISQNLLETIPDG-IGKLKKLSILKVDQNRLTQLPE-AVGDCESLTEL 317

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
               NQ+  +P  I  + K LS +N   N L SLP ++G    LT   L  N+++++  +
Sbjct: 318 VLTENQLLTLPKSI-GKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCLRDNRLTRIPAE 376

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           +     L VL L+ N L  LP S+  L KLK L L +N+ + L
Sbjct: 377 VSQATELHVLDLAGNRLLHLPLSLTAL-KLKALWLSDNQSQPL 418



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 153/324 (47%), Gaps = 56/324 (17%)

Query: 264 LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSL 323
           L  L L  NE+  +P  + N + L  L +S N +  +PE++S C  L   +  G  L  L
Sbjct: 84  LRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRL 143

Query: 324 PDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           P     L +LT  S+N+++L            P    ++Y                    
Sbjct: 144 PKSFPELENLTCLSVNDVSLQ---------SLPENIGNLY-------------------- 174

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
            NL+ + +++NLLT LP  L     L EL+LG N+I  L E I  L+ L+ L L  N L 
Sbjct: 175 -NLTSLELRENLLTYLPDSLTQLRRLEELDLGNNEIHSLPESIGALLCLKDLWLDGNQLS 233

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
           +LP  IGNL+ L CLD+ EN+LE LP EI  L  L  L++  N L ++P  IG L  LS 
Sbjct: 234 ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSI 293

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN----------------------NIPFE 537
           L V +N L  +PE +G  E+L  L L +N  L                       ++P E
Sbjct: 294 LKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 353

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +  C +L +  L +  L++IP+E+
Sbjct: 354 IGGCCSLTVFCLRDNRLTRIPAEV 377



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 177/343 (51%), Gaps = 6/343 (1%)

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
           Q   +  L  LGL++N +  LP  +AN  QL  LD+  N + E+P  +    +L+I    
Sbjct: 77  QFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFS 136

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N +  +      L NL+ LS+ D  ++ LP  +G L NL +L+L  N L  LP  +   
Sbjct: 137 GNPLMRLPKSFPELENLTCLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQL 196

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L  LDL +NE+ ++P+ +G L+ L  L L  N+L  +P+ +    +L   +V    L 
Sbjct: 197 RRLEELDLGNNEIHSLPESIGALLCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLE 256

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP+  +S LTS+ ++ +S+N     P G G  +  S+  +  + N++ ++P  +    +
Sbjct: 257 RLPEE-ISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKV--DQNRLTQLPEAV-GDCE 312

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           +L+++ + +N L +LP  +G    L+ LN   N++  L ++I    +L V  L +N L +
Sbjct: 313 SLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCLRDNRLTR 372

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           +P+ +    +L  LDL  N+L  LP  +  LK L+ L L  NQ
Sbjct: 373 IPAEVSQATELHVLDLAGNRLLHLPLSLTALK-LKALWLSDNQ 414



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 124/223 (55%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +L+L ++ +T+LP S+ +L  LEEL L  N++ SLP  IG +  L  L L  N L+ 
Sbjct: 175 NLTSLELRENLLTYLPDSLTQLRRLEELDLGNNEIHSLPESIGALLCLKDLWLDGNQLSE 234

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + NL+ L  LD+  N+L  LP  +  LTSL  L +  N ++T+   I  L  LS+L
Sbjct: 235 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 294

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++ +LP  +G+ ++L  L L  N L  LPK IG    L  L+   N+LV++P  +
Sbjct: 295 KVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 354

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
           G   +LT   L  NRL  +P  +S+   L+  ++ G  L  LP
Sbjct: 355 GGCCSLTVFCLRDNRLTRIPAEVSQATELHVLDLAGNRLLHLP 397



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 2/191 (1%)

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           + +  F   K L K+ + DN +  LP ++  ++ L EL++  N I ++ E I     L++
Sbjct: 74  VGWQFFQLVK-LRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQI 132

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA 490
              S N L +LP S   L  L CL + +  L+SLP  IG L  L  L L+ N L  LP +
Sbjct: 133 ADFSGNPLMRLPKSFPELENLTCLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDS 192

Query: 491 IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLD 550
           +  L  L  L +G N + S+PE IG L  L  L+L+ N  L+ +P E+    NL  + + 
Sbjct: 193 LTQLRRLEELDLGNNEIHSLPESIGALLCLKDLWLDGNQ-LSELPQEIGNLKNLLCLDVS 251

Query: 551 NCPLSQIPSEI 561
              L ++P EI
Sbjct: 252 ENRLERLPEEI 262



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 87/155 (56%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+L LD+S++ +  LP  +  LT L +L +  N L ++P  IG +  L+ L + +N LT
Sbjct: 243 KNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLT 302

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP+++ + + L  L L  N+L  LP  + KL  L  L    N++ ++  +I    +L++
Sbjct: 303 QLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 362

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
             +RDN++  +P E+ +   L  LDLA N L  LP
Sbjct: 363 FCLRDNRLTRIPAEVSQATELHVLDLAGNRLLHLP 397



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 4/125 (3%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E++  L L+++ +  LP S+ KL  L  L    NKL SLP +IG   +LT   L +N LT
Sbjct: 312 ESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCLRDNRLT 371

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK---TVHPDIQYLSN 217
            +P  ++   +L VLDL  N+L  LP+ +  L  LK L+L  N+ +   T   D  Y + 
Sbjct: 372 RIPAEVSQATELHVLDLAGNRLLHLPLSLTAL-KLKALWLSDNQSQPLLTFQTDTDYTTG 430

Query: 218 LSMLS 222
             +L+
Sbjct: 431 EKVLT 435


>gi|61806462|ref|NP_001013463.1| leucine-rich repeat-containing protein 1 [Danio rerio]
 gi|60551959|gb|AAH90814.1| Zgc:101523 [Danio rerio]
          Length = 526

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 199/390 (51%), Gaps = 28/390 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + +  +D RH  L  +P  +Y+   SL+ L L  N+++ +      L+ L  L + DN+I
Sbjct: 12  RHIEAIDRRHCSLLFVPDEIYRYRGSLEELLLDANQLRDLPKPFFNLTKLRKLGLSDNEI 71

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LP ++     LV LD++ N + ELP+ I  C  L   D   N L  +P+    L NL 
Sbjct: 72  QRLPGDIANFNQLVELDISRNDIMELPESISYCKTLQVADFSGNPLTRLPESFPELRNLA 131

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
                             C+ +N+      +L +LPD +  +L ++ ++ L  N  T  P
Sbjct: 132 ------------------CLSINDI-----SLQALPDNI-GNLCNLVSLELRENLLTYLP 167

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
               +Q   +  ++   N++  +P  I     +L  + +  N L+ +P ++G+   LT L
Sbjct: 168 ES-LSQLQKLEELDVGSNELYNLPETIGCLV-SLKDLWLDGNQLSDIPAEVGSMRSLTCL 225

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L E++ NL++L  L++S NL+  LP  IG L++L  L  ++N+L  LP  I
Sbjct: 226 DVSENKLERLPEEMGNLLSLTDLLVSQNLIDLLPEGIGKLKRLSILKADQNRLVQLPESI 285

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + L  L+L  NQLV+LPR+IG L  LS  +   N L S+P+EIG   +L+ L + +N
Sbjct: 286 GHCESLTELVLTENQLVNLPRSIGKLKKLSNFNCDRNRLASLPKEIGGCCSLNVLCVREN 345

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L  IP EL+  S L ++ L    L  +P
Sbjct: 346 R-LMRIPPELSQASELHVLDLSGNRLLYLP 374



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 194/435 (44%), Gaps = 52/435 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLT-HLEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   +I  +D    S+  +P  + +    LEEL L  N+L  LP     +T L  LG
Sbjct: 7   LWRCNR-HIEAIDRRHCSLLFVPDEIYRYRGSLEELLLDANQLRDLPKPFFNLTKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N + ELP                         I 
Sbjct: 66  LSDNEIQRLPGDIANFNQLVELDISRNDIMELP-----------------------ESIS 102

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
           Y   L +     N +  LP    EL+NL  L +    L+ LP  IGN   LV+L+L+ N 
Sbjct: 103 YCKTLQVADFSGNPLTRLPESFPELRNLACLSINDISLQALPDNIGNLCNLVSLELRENL 162

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L  +P+ L  L  L  L +  N L ++PET+   V L +  ++G  LS +P   + S+ S
Sbjct: 163 LTYLPESLSQLQKLEELDVGSNELYNLPETIGCLVSLKDLWLDGNQLSDIP-AEVGSMRS 221

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           +  + +S NK    P        S+  +    N ID +P GI  + K LS +    N L 
Sbjct: 222 LTCLDVSENKLERLPEEM-GNLLSLTDLLVSQNLIDLLPEGI-GKLKRLSILKADQNRLV 279

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            LP  +G    LTEL                       VL+ N L  LP SIG L+KL  
Sbjct: 280 QLPESIGHCESLTEL-----------------------VLTENQLVNLPRSIGKLKKLSN 316

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
            + + N+L SLP EIG    L  L ++ N+L+ +P  +   + L  L +  N L  +P  
Sbjct: 317 FNCDRNRLASLPKEIGGCCSLNVLCVRENRLMRIPPELSQASELHVLDLSGNRLLYLPLT 376

Query: 514 IGTLENLHTLYLNDN 528
           + +L  L  L+L++N
Sbjct: 377 LTSLR-LKALWLSEN 390



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 166/353 (47%), Gaps = 52/353 (14%)

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
           +Y  +L  L +  N++R+LP     L  L  L L+ N ++ LP +I N   LV LD+  N
Sbjct: 33  RYRGSLEELLLDANQLRDLPKPFFNLTKLRKLGLSDNEIQRLPGDIANFNQLVELDISRN 92

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
           +++ +P+ +     L     S N L  +PE+  +  +L   ++   +L +LPD       
Sbjct: 93  DIMELPESISYCKTLQVADFSGNPLTRLPESFPELRNLACLSINDISLQALPD------- 145

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
           +I N+                                           NL  + +++NLL
Sbjct: 146 NIGNLC------------------------------------------NLVSLELRENLL 163

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
           T LP  L     L EL++G+N++  L E I  LV+L+ L L  N L  +P+ +G++R L 
Sbjct: 164 TYLPESLSQLQKLEELDVGSNELYNLPETIGCLVSLKDLWLDGNQLSDIPAEVGSMRSLT 223

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
           CLD+ ENKLE LP E+G L  L  L++  N +  LP  IG L  LS L   +N L  +PE
Sbjct: 224 CLDVSENKLERLPEEMGNLLSLTDLLVSQNLIDLLPEGIGKLKRLSILKADQNRLVQLPE 283

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGG 565
            IG  E+L  L L +N  L N+P  +     L   + D   L+ +P EI  GG
Sbjct: 284 SIGHCESLTELVLTENQ-LVNLPRSIGKLKKLSNFNCDRNRLASLPKEI--GG 333



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 162/314 (51%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  LP S+     L+     GN L  LP     + NL CL + + SL +L
Sbjct: 84  LVELDISRNDIMELPESISYCKTLQVADFSGNPLTRLPESFPELRNLACLSINDISLQAL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           PD++ NL  L  L+LR N L  LP  + +L  L+ L +  N +  +   I  L +L  L 
Sbjct: 144 PDNIGNLCNLVSLELRENLLTYLPESLSQLQKLEELDVGSNELYNLPETIGCLVSLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ++P E+G +++L  LD++ N LE LP+E+GN   L  L +  N +  +P+ +G
Sbjct: 204 LDGNQLSDIPAEVGSMRSLTCLDVSENKLERLPEEMGNLLSLTDLLVSQNLIDLLPEGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L+   NRL  +PE++  C  L E  +    L +LP   +  L  ++N    RN
Sbjct: 264 KLKRLSILKADQNRLVQLPESIGHCESLTELVLTENQLVNLPRS-IGKLKKLSNFNCDRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           +  + P   GG     S+  +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 323 RLASLPKEIGG---CCSLNVLCVRENRLMRIPPEL-SQASELHVLDLSGNRLLYLPLTL- 377

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 378 TSLRLKALWLSENQ 391


>gi|428179184|gb|EKX48056.1| hypothetical protein GUITHDRAFT_93733 [Guillardia theta CCMP2712]
          Length = 567

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 213/425 (50%), Gaps = 28/425 (6%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           I  +P     LT L  L +  N + ++PSQIG +T +  L L +N +   P S++ L QL
Sbjct: 111 IKEIPREFSCLTSLTLLGIGFNNIVTIPSQIGMMTAMKSLILQKNEIIYFPSSISWLMQL 170

Query: 173 RVLDLRHNKLNELPMVVYK-----------------------LTSLKILYLRFNRIKTVH 209
             L++  N ++  P  V K                       L  +K + L FN+I  + 
Sbjct: 171 ETLNMSGNAVSVFPKSVCKVGNLYSLDFSRNDMEKLVPYIGNLLGMKEMVLSFNKIDEIP 230

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
             I  L +L+ L +  N++  L   +G L +L  LD++HN +EELP E  + T L  L L
Sbjct: 231 AQIGKLVHLTTLKLDFNRLTFLHAAIGALTSLTCLDVSHNQIEELPSEFFDLTNLQQLAL 290

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL-NEFNVEGCALSSLPDGLL 328
            HN+L+ +   + +   L  L +S+N L ++P+ +S    L N   ++ C L+ +PD  +
Sbjct: 291 NHNKLIYLSGAVSSYQRLAELYVSHNYLRALPDAISSLKKLINMLFLDDCNLNQIPDA-I 349

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
               S+  ++   N  T  P+   +  TS+  +N   N+I   P        N+ ++N+ 
Sbjct: 350 GYCISLRCLSAGGNTITLVPA-AISGLTSLEILNLSMNKICFFPE--VYNLTNMVQLNLN 406

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
           DNL+ ++ + +G  V L EL +G N++S +   +  L++L  L L  N +  LP SIG L
Sbjct: 407 DNLIANIKMTIGDMVRLEELYIGNNKLSTVPSTVGCLLSLHSLELQRNRILSLPESIGAL 466

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
             L+ L L  N L SLP+ +  L  L+ L L+ NQ+   P AI  L++L  L++G+N L 
Sbjct: 467 TLLRSLKLHGNLLSSLPSSVSRLIHLEVLTLRDNQISEPPSAILSLSSLKTLTLGKNKLD 526

Query: 509 SIPEE 513
            +P++
Sbjct: 527 KMPDK 531



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 205/441 (46%), Gaps = 73/441 (16%)

Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
           L+ L+ L L  N+L+SLP+Q+G  T+LT L + EN +  +P                   
Sbjct: 3   LSQLQSLILDRNRLSSLPAQLGQCTSLTFLSIVENEIEGIP------------------- 43

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP-PELGELKNL 241
             +P  ++ LT+L  L L  N I  +  ++  L  L  L + DN+I  +P  E+G    L
Sbjct: 44  --VPASIHALTNLIALDLSENDISVLPDEVCSLLKLEALYLDDNRISSIPLSEMGSCTAL 101

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
           + +   +N ++E+P+E    T L  L +  N +V IP  +G +  +  L L  N +   P
Sbjct: 102 LEIVADNNLIKEIPREFSCLTSLTLLGIGFNNIVTIPSQIGMMTAMKSLILQKNEIIYFP 161

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
            ++S  + L   N+ G A+S  P     S+  + N+                     YS+
Sbjct: 162 SSISWLMQLETLNMSGNAVSVFP----KSVCKVGNL---------------------YSL 196

Query: 362 NFEHNQIDK-IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
           +F  N ++K +PY                         +G  +G+ E+ L  N+I ++  
Sbjct: 197 DFSRNDMEKLVPY-------------------------IGNLLGMKEMVLSFNKIDEIPA 231

Query: 421 DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQ 480
            I  LV+L  L L  N L  L ++IG L  L CLD+  N++E LP+E   L  LQ+L L 
Sbjct: 232 QIGKLVHLTTLKLDFNRLTFLHAAIGALTSLTCLDVSHNQIEELPSEFFDLTNLQQLALN 291

Query: 481 SNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELAL 540
            N+L+ L  A+     L+ L V  N L+++P+ I +L+ L  +   D+  LN IP  +  
Sbjct: 292 HNKLIYLSGAVSSYQRLAELYVSHNYLRALPDAISSLKKLINMLFLDDCNLNQIPDAIGY 351

Query: 541 CSNLQIMSLDNCPLSQIPSEI 561
           C +L+ +S     ++ +P+ I
Sbjct: 352 CISLRCLSAGGNTITLVPAAI 372



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 229/472 (48%), Gaps = 50/472 (10%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLP--SQIGYVTNLTCLGLAENSLTSL 162
           +L L ++ ++ LP  + + T L  L +  N++  +P  + I  +TNL  L L+EN ++ L
Sbjct: 8   SLILDRNRLSSLPAQLGQCTSLTFLSIVENEIEGIPVPASIHALTNLIALDLSENDISVL 67

Query: 163 PDSLANLQQLRVLDLRHNKLNELPM-----------VVYK-------------LTSLKIL 198
           PD + +L +L  L L  N+++ +P+           +V               LTSL +L
Sbjct: 68  PDEVCSLLKLEALYLDDNRISSIPLSEMGSCTALLEIVADNNLIKEIPREFSCLTSLTLL 127

Query: 199 YLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
            + FN I T+   I  ++ +  L ++ N+I   P  +  L  L TL+++ N +   PK +
Sbjct: 128 GIGFNNIVTIPSQIGMMTAMKSLILQKNEIIYFPSSISWLMQLETLNMSGNAVSVFPKSV 187

Query: 259 GNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
                L +LD   N++  +   +GNL+ +  + LS+N+++ +P  + K VHL    ++  
Sbjct: 188 CKVGNLYSLDFSRNDMEKLVPYIGNLLGMKEMVLSFNKIDEIPAQIGKLVHLTTLKLDFN 247

Query: 319 ALSSL--PDGLLSSLTSIN--------------------NITLSRNKFTAYPSGGPTQFT 356
            L+ L    G L+SLT ++                     + L+ NK   Y SG  + + 
Sbjct: 248 RLTFLHAAIGALTSLTCLDVSHNQIEELPSEFFDLTNLQQLALNHNKLI-YLSGAVSSYQ 306

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS 416
            +  +   HN +  +P  I S  K ++ + + D  L  +P  +G  + L  L+ G N I+
Sbjct: 307 RLAELYVSHNYLRALPDAISSLKKLINMLFLDDCNLNQIPDAIGYCISLRCLSAGGNTIT 366

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
            +   I  L +LE+L LS N +   P  + NL  +  L+L +N + ++   IG +  L+ 
Sbjct: 367 LVPAAISGLTSLEILNLSMNKICFFP-EVYNLTNMVQLNLNDNLIANIKMTIGDMVRLEE 425

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L + +N+L ++P  +G L +L  L +  N + S+PE IG L  L +L L+ N
Sbjct: 426 LYIGNNKLSTVPSTVGCLLSLHSLELQRNRILSLPESIGALTLLRSLKLHGN 477



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 189/383 (49%), Gaps = 37/383 (9%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           CK  N+ +LD S++ +  L P +  L  ++E+ L  NK+  +P+QIG + +LT L L  N
Sbjct: 188 CKVGNLYSLDFSRNDMEKLVPYIGNLLGMKEMVLSFNKIDEIPAQIGKLVHLTTLKLDFN 247

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            LT L  ++  L  L  LD+ HN++ ELP   + LT+L+ L L  N++  +   +     
Sbjct: 248 RLTFLHAAIGALTSLTCLDVSHNQIEELPSEFFDLTNLQQLALNHNKLIYLSGAVSSYQR 307

Query: 218 LSMLSMRDNKIRELPPELGELKNLV-TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           L+ L +  N +R LP  +  LK L+  L L   +L ++P  IG C  L  L    N +  
Sbjct: 308 LAELYVSHNYLRALPDAISSLKKLINMLFLDDCNLNQIPDAIGYCISLRCLSAGGNTITL 367

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPET--LSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           +P  +  L +L  L LS N++   PE   L+  V LN           L D L++++   
Sbjct: 368 VPAAISGLTSLEILNLSMNKICFFPEVYNLTNMVQLN-----------LNDNLIANI--- 413

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                   K T    G   +   +Y     +N++  +P  +     +L  + ++ N + S
Sbjct: 414 --------KMTI---GDMVRLEELY---IGNNKLSTVPSTV-GCLLSLHSLELQRNRILS 458

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G    L  L L  N +S L   +  L++LEVL L +N + + PS+I +L  LK L
Sbjct: 459 LPESIGALTLLRSLKLHGNLLSSLPSSVSRLIHLEVLTLRDNQISEPPSAILSLSSLKTL 518

Query: 455 DLEENKLESLPNEIGFLKELQRL 477
            L +NKL+ +P+     K++QRL
Sbjct: 519 TLGKNKLDKMPD-----KQVQRL 536


>gi|195381915|ref|XP_002049678.1| GJ21726 [Drosophila virilis]
 gi|194144475|gb|EDW60871.1| GJ21726 [Drosophila virilis]
          Length = 861

 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 191/378 (50%), Gaps = 26/378 (6%)

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
           +  P V     +L+ L+L   R++T+ P + Y   L +L +  N +  +P  +G L+ L 
Sbjct: 31  DAFPEVWQHERTLEELHLSNARLQTLPPQLFYCQGLRILQVNSNNLESIPQAIGSLRQLQ 90

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            LDL  N +  +P+EI  C  L  LDL  N L  +PD + +LI+L  L L+   LE +P 
Sbjct: 91  HLDLNRNLIVNVPEEIKACKHLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPA 150

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
              + V+L    V    L +LP  ++  L S+  + +  N+FT  P     +  S+  + 
Sbjct: 151 NFGRLVNLRILEVRLNNLITLPKSMVR-LVSLQRLDIGGNEFTELPEVV-GELKSLRELW 208

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW-------------------V 403
            + NQI ++   I  + + L       NLL +LP +L  W                   V
Sbjct: 209 IDFNQIRRVAPNI-GKLRELQHFEANGNLLDTLPNELSNWRNVEVLSICSNNLEAFPFSV 267

Query: 404 G----LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G    L      +N +S+L + I  L  LE LVLS+N L +LPS+IG+L KL+ L  ++N
Sbjct: 268 GMLKSLVTFKCESNGLSELPDSISYLEQLEELVLSHNKLMRLPSTIGSLVKLRFLFADDN 327

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L  LP+E+    +L  L + +NQL +LP+ IGHL  L  L+V  N + ++P  + +L N
Sbjct: 328 QLRQLPDELCSCSQLSVLSVANNQLSALPQNIGHLAKLKVLNVVNNYINALPVSMLSLVN 387

Query: 520 LHTLYLNDNTCLNNIPFE 537
           L +L+L+DN     +P +
Sbjct: 388 LTSLWLSDNQSQPLVPLQ 405



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 196/387 (50%), Gaps = 6/387 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           +EE I  LD S + +    P V +    LEEL+L   +L +LP Q+ Y   L  L +  N
Sbjct: 15  REEVIDKLDYSNTPLQDAFPEVWQHERTLEELHLSNARLQTLPPQLFYCQGLRILQVNSN 74

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           +L S+P ++ +L+QL+ LDL  N +  +P  +     L  L L  N ++ +   I  L +
Sbjct: 75  NLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKACKHLTHLDLSCNSLQRLPDAITSLIS 134

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L + +  +  LP   G L NL  L++  N+L  LPK +     L  LD+  NE   +
Sbjct: 135 LQELLLNETYLEFLPANFGRLVNLRILEVRLNNLITLPKSMVRLVSLQRLDIGGNEFTEL 194

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P+++G L +L  L + +N++  V   + K   L  F   G  L +LP+  LS+  ++  +
Sbjct: 195 PEVVGELKSLRELWIDFNQIRRVAPNIGKLRELQHFEANGNLLDTLPNE-LSNWRNVEVL 253

Query: 338 TLSRNKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           ++  N   A+P S G     S+ +   E N + ++P  I S  + L ++ +  N L  LP
Sbjct: 254 SICSNNLEAFPFSVG--MLKSLVTFKCESNGLSELPDSI-SYLEQLEELVLSHNKLMRLP 310

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +G+ V L  L    NQ+ +L +++ +   L VL ++NN L  LP +IG+L KLK L++
Sbjct: 311 STIGSLVKLRFLFADDNQLRQLPDELCSCSQLSVLSVANNQLSALPQNIGHLAKLKVLNV 370

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQ 483
             N + +LP  +  L  L  L L  NQ
Sbjct: 371 VNNYINALPVSMLSLVNLTSLWLSDNQ 397



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 160/326 (49%), Gaps = 28/326 (8%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           +N+ +E   CK  ++ +LDLS +S+  LP ++  L  L+EL L    L  LP+  G + N
Sbjct: 100 VNVPEEIKACK--HLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPANFGRLVN 157

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L +  N+L +LP S+  L  L+ LD+  N+  ELP VV +L SL+ L++ FN+I+ V
Sbjct: 158 LRILEVRLNNLITLPKSMVRLVSLQRLDIGGNEFTELPEVVGELKSLRELWIDFNQIRRV 217

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
            P+I  L  L       N +  LP EL   +N+  L +  N+LE  P  +G    LVT  
Sbjct: 218 APNIGKLRELQHFEANGNLLDTLPNELSNWRNVEVLSICSNNLEAFPFSVGMLKSLVTFK 277

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
            + N L  +PD +  L  L  L LS+N+L  +P T+   V L     +   L  LPD L 
Sbjct: 278 CESNGLSELPDSISYLEQLEELVLSHNKLMRLPSTIGSLVKLRFLFADDNQLRQLPDELC 337

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           S                          + +  ++  +NQ+  +P  I   AK L  +N+ 
Sbjct: 338 SC-------------------------SQLSVLSVANNQLSALPQNIGHLAK-LKVLNVV 371

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQ 414
           +N + +LP+ + + V LT L L  NQ
Sbjct: 372 NNYINALPVSMLSLVNLTSLWLSDNQ 397



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 71/133 (53%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           ++++      + ++ LP S+  L  LEEL L  NKL  LPS IG +  L  L   +N L 
Sbjct: 271 KSLVTFKCESNGLSELPDSISYLEQLEELVLSHNKLMRLPSTIGSLVKLRFLFADDNQLR 330

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LPD L +  QL VL + +N+L+ LP  +  L  LK+L +  N I  +   +  L NL+ 
Sbjct: 331 QLPDELCSCSQLSVLSVANNQLSALPQNIGHLAKLKVLNVVNNYINALPVSMLSLVNLTS 390

Query: 221 LSMRDNKIRELPP 233
           L + DN+ + L P
Sbjct: 391 LWLSDNQSQPLVP 403



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 78/153 (50%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L +  +++   P SV  L  L       N L+ LP  I Y+  L  L L+ N L  
Sbjct: 249 NVEVLSICSNNLEAFPFSVGMLKSLVTFKCESNGLSELPDSISYLEQLEELVLSHNKLMR 308

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP ++ +L +LR L    N+L +LP  +   + L +L +  N++  +  +I +L+ L +L
Sbjct: 309 LPSTIGSLVKLRFLFADDNQLRQLPDELCSCSQLSVLSVANNQLSALPQNIGHLAKLKVL 368

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           ++ +N I  LP  +  L NL +L L+ N  + L
Sbjct: 369 NVVNNYINALPVSMLSLVNLTSLWLSDNQSQPL 401


>gi|428169759|gb|EKX38690.1| hypothetical protein GUITHDRAFT_76958, partial [Guillardia theta
           CCMP2712]
          Length = 551

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 149/448 (33%), Positives = 223/448 (49%), Gaps = 37/448 (8%)

Query: 104 LNLDLSKSSITHLPPSV-EKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           +NL +S S+   +P  V   LT L+ L L  NK+A+ P++I  +T L  L LA N LTS+
Sbjct: 45  INLQISNSNAYLVPAGVLNNLTSLQSLDLSTNKIATFPAEISSLTRLRFLHLASNRLTSI 104

Query: 163 PD-SLANLQQLRVLDLRHNKLNELPMVVYK-------------------------LTSLK 196
           P  S   L  L  LDL  N L  +P   +                          L  L+
Sbjct: 105 PGGSFDKLIFLTQLDLSVNLLTSIPPGAFDALTSLTTLSLSSNQLASFPTGTFTNLQRLE 164

Query: 197 ILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL-GELKNLVTLDLAHNHLEELP 255
            + L  N++K +  DI  L+ L+ L +  N++  +P      + +L +LDL+ N L  LP
Sbjct: 165 QMDLSSNQLKAIPADISTLTTLTTLKLSGNQLTTIPTGFFSNMMSLTSLDLSSNELTSLP 224

Query: 256 KEIGNCTMLVTLDLQHNELVNIPD-MLGNLINLTRLRLSYNRLESVPETL-SKCVHLNEF 313
             I +   L+ L    N+L  IP      L +L RL LS N+L S+P  L +  + L+  
Sbjct: 225 SGILSIRSLIFLYASGNQLTAIPSGFFSGLNSLQRLDLSSNKLTSLPAGLFANLIILDSL 284

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           ++    L+S   G  S+L S+  + LS N+  A P+   +  T++ ++    NQ+  IP 
Sbjct: 285 SLASNQLASFSAGFFSTLNSLKTLDLSSNQLKAIPAD-ISTLTTLTTLKLSGNQLTTIPT 343

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWV-GLTELNLGTNQISKLSEDIQNLVNLEVLV 432
           G FS   +L+ +++  N LTSLP   GT + GL  L L + Q++ +  +I ++  L  L 
Sbjct: 344 GFFSNMMSLTSLDLSSNELTSLPS--GTQLTGLGTLKLASLQLTTVPVEILSMKRLATLD 401

Query: 433 LSNNLLKKLPSSI-GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
           LS+N L  +P++   +L+ L  LDL  N L SLP  I  LK L  L L  NQL S+P  +
Sbjct: 402 LSSNKLASIPANFFSSLQTLTFLDLSRNYLVSLPVGISSLKGLTTLHLSGNQLASIPDGV 461

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLEN 519
             LTNL  L +  N LQS+P   GT  N
Sbjct: 462 LSLTNLKNLDLSSNKLQSLPA--GTFTN 487



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 180/390 (46%), Gaps = 81/390 (20%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN---LTCLGLAENSLTSL 162
           +DLS + +  +P  +  LT L  L L GN+L ++P+  G+ +N   LT L L+ N LTSL
Sbjct: 166 MDLSSNQLKAIPADISTLTTLTTLKLSGNQLTTIPT--GFFSNMMSLTSLDLSSNELTSL 223

Query: 163 PDSL------------------------ANLQQLRVLDLRHNKLNELPMVVYK------- 191
           P  +                        + L  L+ LDL  NKL  LP  ++        
Sbjct: 224 PSGILSIRSLIFLYASGNQLTAIPSGFFSGLNSLQRLDLSSNKLTSLPAGLFANLIILDS 283

Query: 192 ------------------LTSLKILYLRFNRIKTVHPDIQ-------------------- 213
                             L SLK L L  N++K +  DI                     
Sbjct: 284 LSLASNQLASFSAGFFSTLNSLKTLDLSSNQLKAIPADISTLTTLTTLKLSGNQLTTIPT 343

Query: 214 -YLSN---LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
            + SN   L+ L +  N++  LP    +L  L TL LA   L  +P EI +   L TLDL
Sbjct: 344 GFFSNMMSLTSLDLSSNELTSLPSG-TQLTGLGTLKLASLQLTTVPVEILSMKRLATLDL 402

Query: 270 QHNELVNIP-DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
             N+L +IP +   +L  LT L LS N L S+P  +S    L   ++ G  L+S+PDG+L
Sbjct: 403 SSNKLASIPANFFSSLQTLTFLDLSRNYLVSLPVGISSLKGLTTLHLSGNQLASIPDGVL 462

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
            SLT++ N+ LS NK  + P+G  T  +S+  ++   NQ+  +P G F+  ++L+ +++ 
Sbjct: 463 -SLTNLKNLDLSSNKLQSLPAGTFTNLSSLEDLSLSSNQLASLPPGFFATLRSLTTLDLS 521

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
           +N  TSLP  + +   L  L L  N IS +
Sbjct: 522 NNKFTSLPPGIESLTSLKYLYLQNNLISNI 551



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 11/312 (3%)

Query: 259 GNCTM-LVTLDLQHNELVNIP-DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE 316
           GNC    + L + ++    +P  +L NL +L  L LS N++ + P  +S    L   ++ 
Sbjct: 38  GNCAYSCINLQISNSNAYLVPAGVLNNLTSLQSLDLSTNKIATFPAEISSLTRLRFLHLA 97

Query: 317 GCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIF 376
              L+S+P G    L  +  + LS N  T+ P G     TS+ +++   NQ+   P G F
Sbjct: 98  SNRLTSIPGGSFDKLIFLTQLDLSVNLLTSIPPGAFDALTSLTTLSLSSNQLASFPTGTF 157

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL-SEDIQNLVNLEVLVLSN 435
           +  + L ++++  N L ++P D+ T   LT L L  NQ++ + +    N+++L  L LS+
Sbjct: 158 TNLQRLEQMDLSSNQLKAIPADISTLTTLTTLKLSGNQLTTIPTGFFSNMMSLTSLDLSS 217

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF---LKELQRLILQSNQLVSLPRAI- 491
           N L  LPS I ++R L  L    N+L ++P+  GF   L  LQRL L SN+L SLP  + 
Sbjct: 218 NELTSLPSGILSIRSLIFLYASGNQLTAIPS--GFFSGLNSLQRLDLSSNKLTSLPAGLF 275

Query: 492 GHLTNLSYLSVGENNLQSIPEE-IGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLD 550
            +L  L  LS+  N L S       TL +L TL L+ N  L  IP +++  + L  + L 
Sbjct: 276 ANLIILDSLSLASNQLASFSAGFFSTLNSLKTLDLSSNQ-LKAIPADISTLTTLTTLKLS 334

Query: 551 NCPLSQIPSEIV 562
              L+ IP+   
Sbjct: 335 GNQLTTIPTGFF 346



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 6/112 (5%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN---LTCLGLAEN 157
           + +  L LS + +  +P  V  LT+L+ L L  NKL SLP+  G  TN   L  L L+ N
Sbjct: 442 KGLTTLHLSGNQLASIPDGVLSLTNLKNLDLSSNKLQSLPA--GTFTNLSSLEDLSLSSN 499

Query: 158 SLTSLPDS-LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
            L SLP    A L+ L  LDL +NK   LP  +  LTSLK LYL+ N I  +
Sbjct: 500 QLASLPPGFFATLRSLTTLDLSNNKFTSLPPGIESLTSLKYLYLQNNLISNI 551


>gi|357439013|ref|XP_003589783.1| Receptor protein kinase-like protein [Medicago truncatula]
 gi|355478831|gb|AES60034.1| Receptor protein kinase-like protein [Medicago truncatula]
          Length = 1131

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 154/507 (30%), Positives = 256/507 (50%), Gaps = 63/507 (12%)

Query: 106 LDLSKSSITH-LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-L 162
           LDLS + ++  +P ++  L++L  LYLY N L  S+PS++G + +L  + L  N L+  +
Sbjct: 227 LDLSANYLSGTIPSTIGNLSNLHWLYLYQNHLMGSIPSEVGNLYSLFTIQLLGNHLSGPI 286

Query: 163 PDSLANLQQLRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSM 220
           P S+ NL  L  + L HN L+ E+P+ + KL +L  + L  N+I    P  I  L+ L++
Sbjct: 287 PSSIGNLVNLNSIRLDHNDLSGEIPISIGKLVNLDTIDLSDNKISGPLPSTIGNLTKLTV 346

Query: 221 LSMRDNKIR-ELPPELGELKNLVTLDLAHNHLEE-LPKEIGNCTMLVTLDLQHNELVN-I 277
           L +  N +  ++PP +G L NL T+DL+ N L   +P  +GN T +  L L  N L   +
Sbjct: 347 LYLSSNALTGQIPPSIGNLVNLDTIDLSENKLSRPIPSTVGNLTKVSILSLHSNALTGQL 406

Query: 278 PDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           P  +GN++NL  + LS N+L   +P T+     LN  ++   +L+     +++++ ++ +
Sbjct: 407 PPSIGNMVNLDTIYLSENKLSGPIPSTIGNLTKLNSLSLFSNSLTGNIPKVMNNIANLES 466

Query: 337 ITLSRNKFTAY-------------PSGGPTQFT-----------SVYSINFEHNQI-DKI 371
           + L+ N FT +              S    QFT           S+  +  + NQI D I
Sbjct: 467 LQLASNNFTGHLPLNICAGRKLTKFSASNNQFTGPIPKSLKKCSSLIRVRLQQNQITDNI 526

Query: 372 --PYGIF---------------------SRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTE 407
              +G++                      + KNL+ + + +N LT S+P +LG    L E
Sbjct: 527 TDAFGVYPNLDYMELSDNNFYGHISPNWGKCKNLTSLQISNNNLTGSIPQELGGATQLQE 586

Query: 408 LNLGTNQIS-KLSEDIQNLVNLEVLVLSNN-LLKKLPSSIGNLRKLKCLDLEENKLES-L 464
           LNL +N ++ K+ E++ NL  L  L +SNN LL ++P  I +L+ L  L+LE+N L   +
Sbjct: 587 LNLSSNHLTGKIPEELGNLSLLIKLSISNNNLLGEVPVQIASLQALTALELEKNNLSGFI 646

Query: 465 PNEIGFLKELQRLILQSNQL-VSLPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTLENLHT 522
           P  +G L EL  L L  N+   ++P     L  +  L + EN +  +IP  +G L +L T
Sbjct: 647 PRRLGRLSELIHLNLSQNKFEGNIPVEFDQLKVIEDLDLSENVMSGTIPSMLGQLNHLQT 706

Query: 523 LYLNDNTCLNNIPFELALCSNLQIMSL 549
           L L+ N     IP       +L I+ +
Sbjct: 707 LNLSHNNLSGTIPLSYGEMLSLTIVDI 733



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 136/433 (31%), Positives = 207/433 (47%), Gaps = 61/433 (14%)

Query: 130 YLYGNKLASLPSQIGYVTNLTCLGLAENSLT-SLPDSLANLQQLRVLDLRHNKLNELPMV 188
           +LYG     +P  IG +++L  L L+ N+L+ ++P+S+ NL ++  LDL  N L  +  +
Sbjct: 113 FLYG----VVPHHIGEMSSLKTLDLSVNNLSGTIPNSIGNLSKISYLDLSFNYLTGI--I 166

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK-IRELPPELGELKNLVTLDLA 247
            +++T L  LY                     LSM  N+ I  +P E+G L NL  LD+ 
Sbjct: 167 PFEITQLVSLYF--------------------LSMATNQLIGHIPREIGNLVNLERLDIQ 206

Query: 248 HNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRL-ESVPETL 304
            N+L   +P+EIG  T L  LDL  N L   IP  +GNL NL  L L  N L  S+P  +
Sbjct: 207 LNNLTGSVPQEIGFLTKLAELDLSANYLSGTIPSTIGNLSNLHWLYLYQNHLMGSIPSEV 266

Query: 305 SKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFE 364
                L    + G  LS      + +L ++N+I L  N  +                   
Sbjct: 267 GNLYSLFTIQLLGNHLSGPIPSSIGNLVNLNSIRLDHNDLSG------------------ 308

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTS-LPLDLGTWVGLTELNLGTNQIS-KLSEDI 422
                +IP  I  +  NL  +++ DN ++  LP  +G    LT L L +N ++ ++   I
Sbjct: 309 -----EIPISI-GKLVNLDTIDLSDNKISGPLPSTIGNLTKLTVLYLSSNALTGQIPPSI 362

Query: 423 QNLVNLEVLVLSNNLLKK-LPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQ 480
            NLVNL+ + LS N L + +PS++GNL K+  L L  N L   LP  IG +  L  + L 
Sbjct: 363 GNLVNLDTIDLSENKLSRPIPSTVGNLTKVSILSLHSNALTGQLPPSIGNMVNLDTIYLS 422

Query: 481 SNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFEL 538
            N+L   +P  IG+LT L+ LS+  N+L   IP+ +  + NL +L L  N    ++P  +
Sbjct: 423 ENKLSGPIPSTIGNLTKLNSLSLFSNSLTGNIPKVMNNIANLESLQLASNNFTGHLPLNI 482

Query: 539 ALCSNLQIMSLDN 551
                L   S  N
Sbjct: 483 CAGRKLTKFSASN 495



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 126/386 (32%), Positives = 193/386 (50%), Gaps = 14/386 (3%)

Query: 192 LTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHN 249
           LT +  L L  N +  V P  I  +S+L  L +  N +   +P  +G L  +  LDL+ N
Sbjct: 101 LTKIHTLVLTNNFLYGVVPHHIGEMSSLKTLDLSVNNLSGTIPNSIGNLSKISYLDLSFN 160

Query: 250 HLEEL-PKEIGNCTMLVTLDLQHNELV-NIPDMLGNLINLTRLRLSYNRLE-SVPETLSK 306
           +L  + P EI     L  L +  N+L+ +IP  +GNL+NL RL +  N L  SVP+ +  
Sbjct: 161 YLTGIIPFEITQLVSLYFLSMATNQLIGHIPREIGNLVNLERLDIQLNNLTGSVPQEIGF 220

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
              L E ++    LS      + +L++++ + L +N              S+++I    N
Sbjct: 221 LTKLAELDLSANYLSGTIPSTIGNLSNLHWLYLYQNHLMGSIPSEVGNLYSLFTIQLLGN 280

Query: 367 QIDK-IPYGIFSRAKNLSKVNMKDNLLTS-LPLDLGTWVGLTELNLGTNQISK-LSEDIQ 423
            +   IP  I     NL+ + +  N L+  +P+ +G  V L  ++L  N+IS  L   I 
Sbjct: 281 HLSGPIPSSI-GNLVNLNSIRLDHNDLSGEIPISIGKLVNLDTIDLSDNKISGPLPSTIG 339

Query: 424 NLVNLEVLVLSNNLLK-KLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQS 481
           NL  L VL LS+N L  ++P SIGNL  L  +DL ENKL   +P+ +G L ++  L L S
Sbjct: 340 NLTKLTVLYLSSNALTGQIPPSIGNLVNLDTIDLSENKLSRPIPSTVGNLTKVSILSLHS 399

Query: 482 NQLVS-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
           N L   LP +IG++ NL  + + EN L   IP  IG L  L++L L  N+   NIP  + 
Sbjct: 400 NALTGQLPPSIGNMVNLDTIYLSENKLSGPIPSTIGNLTKLNSLSLFSNSLTGNIPKVMN 459

Query: 540 LCSNLQIMSL-DNCPLSQIPSEIVVG 564
             +NL+ + L  N     +P  I  G
Sbjct: 460 NIANLESLQLASNNFTGHLPLNICAG 485



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 171/392 (43%), Gaps = 39/392 (9%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTS-L 162
           L L  +++T  LPPS+  + +L+ +YL  NKL+  +PS IG +T L  L L  NSLT  +
Sbjct: 395 LSLHSNALTGQLPPSIGNMVNLDTIYLSENKLSGPIPSTIGNLTKLNSLSLFSNSLTGNI 454

Query: 163 PDSLANLQQLRVLDLRHNKL-------------------------NELPMVVYKLTSLKI 197
           P  + N+  L  L L  N                             +P  + K +SL  
Sbjct: 455 PKVMNNIANLESLQLASNNFTGHLPLNICAGRKLTKFSASNNQFTGPIPKSLKKCSSLIR 514

Query: 198 LYLRFNRI-KTVHPDIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-EL 254
           + L+ N+I   +        NL  + + DN     + P  G+ KNL +L +++N+L   +
Sbjct: 515 VRLQQNQITDNITDAFGVYPNLDYMELSDNNFYGHISPNWGKCKNLTSLQISNNNLTGSI 574

Query: 255 PKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRL-ESVPETLSKCVHLNE 312
           P+E+G  T L  L+L  N L   IP+ LGNL  L +L +S N L   VP  ++    L  
Sbjct: 575 PQELGGATQLQELNLSSNHLTGKIPEELGNLSLLIKLSISNNNLLGEVPVQIASLQALTA 634

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
             +E   LS      L  L+ + ++ LS+NKF         Q   +  ++   N +    
Sbjct: 635 LELEKNNLSGFIPRRLGRLSELIHLNLSQNKFEGNIPVEFDQLKVIEDLDLSENVMSGTI 694

Query: 373 YGIFSRAKNLSKVNMK-DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
             +  +  +L  +N+  +NL  ++PL  G  + LT +++  NQ+      I       + 
Sbjct: 695 PSMLGQLNHLQTLNLSHNNLSGTIPLSYGEMLSLTIVDISYNQLEGPIPSITAFQKAPIE 754

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            L NN  K L    GN+  L C         S
Sbjct: 755 ALRNN--KGL---CGNVSGLVCCSTSGGNFHS 781



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/193 (36%), Positives = 95/193 (49%), Gaps = 7/193 (3%)

Query: 376 FSRAKNLSKVNMKDNLLTSL-PLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVL 433
           FS    +  + + +N L  + P  +G    L  L+L  N +S  +   I NL  +  L L
Sbjct: 98  FSSLTKIHTLVLTNNFLYGVVPHHIGEMSSLKTLDLSVNNLSGTIPNSIGNLSKISYLDL 157

Query: 434 SNNLLKKL-PSSIGNLRKLKCLDLEENKL-ESLPNEIGFLKELQRLILQSNQLV-SLPRA 490
           S N L  + P  I  L  L  L +  N+L   +P EIG L  L+RL +Q N L  S+P+ 
Sbjct: 158 SFNYLTGIIPFEITQLVSLYFLSMATNQLIGHIPREIGNLVNLERLDIQLNNLTGSVPQE 217

Query: 491 IGHLTNLSYLSVGENNLQ-SIPEEIGTLENLHTLYLNDNTCLNNIPFELA-LCSNLQIMS 548
           IG LT L+ L +  N L  +IP  IG L NLH LYL  N  + +IP E+  L S   I  
Sbjct: 218 IGFLTKLAELDLSANYLSGTIPSTIGNLSNLHWLYLYQNHLMGSIPSEVGNLYSLFTIQL 277

Query: 549 LDNCPLSQIPSEI 561
           L N     IPS I
Sbjct: 278 LGNHLSGPIPSSI 290



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 104/192 (54%), Gaps = 9/192 (4%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVT 147
           +I   + +CK  N+ +L +S +++T  +P  +   T L+EL L  N L   +P ++G ++
Sbjct: 549 HISPNWGKCK--NLTSLQISNNNLTGSIPQELGGATQLQELNLSSNHLTGKIPEELGNLS 606

Query: 148 NLTCLGLAENSLTS-LPDSLANLQQLRVLDLRHNKLNE-LPMVVYKLTSLKILYLRFNRI 205
            L  L ++ N+L   +P  +A+LQ L  L+L  N L+  +P  + +L+ L  L L  N+ 
Sbjct: 607 LLIKLSISNNNLLGEVPVQIASLQALTALELEKNNLSGFIPRRLGRLSELIHLNLSQNKF 666

Query: 206 KTVHP-DIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCT 262
           +   P +   L  +  L + +N +   +P  LG+L +L TL+L+HN+L   +P   G   
Sbjct: 667 EGNIPVEFDQLKVIEDLDLSENVMSGTIPSMLGQLNHLQTLNLSHNNLSGTIPLSYGEML 726

Query: 263 MLVTLDLQHNEL 274
            L  +D+ +N+L
Sbjct: 727 SLTIVDISYNQL 738


>gi|158536494|gb|ABW72741.1| flagellin-sensing 2-like protein [Thlaspi alpestre]
          Length = 678

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 173/526 (32%), Positives = 246/526 (46%), Gaps = 76/526 (14%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTSLP 163
           LDL+ ++ T  +P  + KLT L +L LY N    ++PS+I  + N+  L L EN LT   
Sbjct: 11  LDLTSNNFTGEIPAEIGKLTELNQLILYLNYFSGTIPSEIWELKNIVYLDLRENLLTGDV 70

Query: 164 DSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSML 221
           +++     L ++ L +N L   +P  +  L  L+I     NR     P  I  L NL+ L
Sbjct: 71  EAICKTSSLVLVGLANNNLTGNIPECLGSLVHLQIFMAGLNRFTGSIPVSIGTLVNLTDL 130

Query: 222 SMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IP 278
            +  N++  + P E+G L NL  L L  N LE E+P EIGNCT L+ +DL  N+L   IP
Sbjct: 131 DLSGNQLTGKTPREIGNLSNLQALALFDNLLEGEIPAEIGNCTSLIEIDLYGNQLTGRIP 190

Query: 279 DMLGNLINLTRLRLSYNRL-ESVPETLSKCVHLNEFNVEGCAL-SSLPD--GLLSSLTSI 334
             LGNL+ L  LRL  N+L  S+P +L +   L    +    L   +P+  GLL SL   
Sbjct: 191 AELGNLVQLEALRLYGNKLNSSIPSSLFRLTRLTILGLSKNQLVGPIPEEIGLLKSLKV- 249

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK---IPYGIFSRAKNLSKVNMKDNL 391
             +TL  N  T       T   ++  I    N I     +  G+ +  +NLS     DNL
Sbjct: 250 --LTLHSNNLTGEFPQSITNLRNLTVITMGFNNISGELPVDLGLLTNLRNLSA---HDNL 304

Query: 392 LTS-------------------------LPLDLGTWVGLTELNLGTNQIS-KLSEDIQNL 425
           LT                          +P  LG  + LT ++LG N+++ ++ +DI N 
Sbjct: 305 LTGPIPSSIRNCTGLKVLDLSHNEMTGEIPRGLG-RMNLTSISLGPNRLTGEIPDDIFNC 363

Query: 426 VNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQ 483
            N E+L L+ NNL   L   IG L+KL+ L L  N L   +P EIG L+EL  L LQ+NQ
Sbjct: 364 SNAEILNLAENNLTGTLKPLIGKLQKLRILQLSFNSLTGKIPGEIGSLRELNLLFLQANQ 423

Query: 484 LVS-LPRAIGHLTNLSYLSVGENNLQS-IPEEI------------------------GTL 517
               +PR + +LT L  L +  N+LQ  IPEE+                          L
Sbjct: 424 FTGRIPREVSNLTLLQGLVLHTNDLQGPIPEEMFGMKLLSLLELSNNRFSGPIPVSFAKL 483

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSL-DNCPLSQIPSEIV 562
           E+L  L L  N    +IP  L   S L    + DN     IP E++
Sbjct: 484 ESLTYLSLQGNKFNGSIPASLKSLSQLNTFDISDNLLTGTIPDELI 529



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 148/504 (29%), Positives = 225/504 (44%), Gaps = 72/504 (14%)

Query: 115 HLPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSL-TSLPDSLANLQQL 172
            +P  +   T L E+ LYGN+L   +P+++G +  L  L L  N L +S+P SL  L +L
Sbjct: 164 EIPAEIGNCTSLIEIDLYGNQLTGRIPAELGNLVQLEALRLYGNKLNSSIPSSLFRLTRL 223

Query: 173 RVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIR- 229
            +L L  N+L   +P  +  L SLK+L L  N +    P  I  L NL++++M  N I  
Sbjct: 224 TILGLSKNQLVGPIPEEIGLLKSLKVLTLHSNNLTGEFPQSITNLRNLTVITMGFNNISG 283

Query: 230 ELPPELGELKNLVTLDLAHNHL--EELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLIN 286
           ELP +LG L NL  L  AH++L    +P  I NCT L  LDL HNE+   IP  LG + N
Sbjct: 284 ELPVDLGLLTNLRNLS-AHDNLLTGPIPSSIRNCTGLKVLDLSHNEMTGEIPRGLGRM-N 341

Query: 287 LTRLRLSYNRLES-VPETLSKC-----VHLNEFNVEGC-------------------ALS 321
           LT + L  NRL   +P+ +  C     ++L E N+ G                    +L+
Sbjct: 342 LTSISLGPNRLTGEIPDDIFNCSNAEILNLAENNLTGTLKPLIGKLQKLRILQLSFNSLT 401

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK-IPYGIFSRAK 380
               G + SL  +N + L  N+FT       +  T +  +    N +   IP  +F    
Sbjct: 402 GKIPGEIGSLRELNLLFLQANQFTGRIPREVSNLTLLQGLVLHTNDLQGPIPEEMFGMKL 461

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI-SKLSEDIQNLVNLEVLVLSNNLLK 439
                   +     +P+       LT L+L  N+    +   +++L  L    +S+NLL 
Sbjct: 462 LSLLELSNNRFSGPIPVSFAKLESLTYLSLQGNKFNGSIPASLKSLSQLNTFDISDNLLT 521

Query: 440 K-LPSS-IGNLRKLKC-LDLEENKLE-SLPNEIGFLKELQRLILQSNQLVS--LPRAIGH 493
             +P   I ++R L+  L+   N L  S+PNE+G L+ +Q +   SN L S  +PR++  
Sbjct: 522 GTIPDELISSMRNLQLNLNFSNNFLTGSIPNELGKLEMVQEIDF-SNNLFSGPIPRSLKA 580

Query: 494 LTNLSYLSVGENNLQS----------------------------IPEEIGTLENLHTLYL 525
             N+  L    NNL                              IP+  G +  L +L L
Sbjct: 581 CKNVFTLDFSRNNLSGQIPDEVFQQGGMDTIRSLNLSRNSLSGGIPKSFGNMTQLVSLDL 640

Query: 526 NDNTCLNNIPFELALCSNLQIMSL 549
           + N     IP  LA  S L+ + L
Sbjct: 641 SSNNLTGEIPESLANLSTLKHLKL 664



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 182/413 (44%), Gaps = 65/413 (15%)

Query: 115 HLPPSVEKLTHLEELYL-YGNKLASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQL 172
             P S+  L +L  + + + N    LP  +G +TNL  L   +N LT  +P S+ N   L
Sbjct: 260 EFPQSITNLRNLTVITMGFNNISGELPVDLGLLTNLRNLSAHDNLLTGPIPSSIRNCTGL 319

Query: 173 RVLDLRHNKL------------------------NELPMVVYKLTSLKILYLRFNRI-KT 207
           +VLDL HN++                         E+P  ++  ++ +IL L  N +  T
Sbjct: 320 KVLDLSHNEMTGEIPRGLGRMNLTSISLGPNRLTGEIPDDIFNCSNAEILNLAENNLTGT 379

Query: 208 VHPDIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLV 265
           + P I  L  L +L +  N +  ++P E+G L+ L  L L  N     +P+E+ N T+L 
Sbjct: 380 LKPLIGKLQKLRILQLSFNSLTGKIPGEIGSLRELNLLFLQANQFTGRIPREVSNLTLLQ 439

Query: 266 TLDLQHNELVN-------------------------IPDMLGNLINLTRLRLSYNRLE-S 299
            L L  N+L                           IP     L +LT L L  N+   S
Sbjct: 440 GLVLHTNDLQGPIPEEMFGMKLLSLLELSNNRFSGPIPVSFAKLESLTYLSLQGNKFNGS 499

Query: 300 VPETLSKCVHLNEFNVEGCALS-SLPDGLLSSLTSIN-NITLSRNKFTAYPSGGPTQFTS 357
           +P +L     LN F++    L+ ++PD L+SS+ ++  N+  S N  T        +   
Sbjct: 500 IPASLKSLSQLNTFDISDNLLTGTIPDELISSMRNLQLNLNFSNNFLTGSIPNELGKLEM 559

Query: 358 VYSINFEHNQIDK-IPYGIFSRAKNLSKVNM-KDNLLTSLPLDL---GTWVGLTELNLGT 412
           V  I+F +N     IP  +    KN+  ++  ++NL   +P ++   G    +  LNL  
Sbjct: 560 VQEIDFSNNLFSGPIPRSL-KACKNVFTLDFSRNNLSGQIPDEVFQQGGMDTIRSLNLSR 618

Query: 413 NQISK-LSEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           N +S  + +   N+  L  L LS NNL  ++P S+ NL  LK L L  N L+ 
Sbjct: 619 NSLSGGIPKSFGNMTQLVSLDLSSNNLTGEIPESLANLSTLKHLKLASNHLKG 671



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 422 IQNLVNLEVLVL-SNNLLKKLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLIL 479
           I NL  L+VL L SNN   ++P+ IG L +L  L L  N    ++P+EI  LK +  L L
Sbjct: 2   ISNLTYLQVLDLTSNNFTGEIPAEIGKLTELNQLILYLNYFSGTIPSEIWELKNIVYLDL 61

Query: 480 QSNQLVS------------------------LPRAIGHLTNLSYLSVGENNLQ-SIPEEI 514
           + N L                          +P  +G L +L     G N    SIP  I
Sbjct: 62  RENLLTGDVEAICKTSSLVLVGLANNNLTGNIPECLGSLVHLQIFMAGLNRFTGSIPVSI 121

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL-DNCPLSQIPSEI 561
           GTL NL  L L+ N      P E+   SNLQ ++L DN    +IP+EI
Sbjct: 122 GTLVNLTDLDLSGNQLTGKTPREIGNLSNLQALALFDNLLEGEIPAEI 169


>gi|429961970|gb|ELA41514.1| hypothetical protein VICG_01498 [Vittaforma corneae ATCC 50505]
          Length = 1394

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 229/470 (48%), Gaps = 59/470 (12%)

Query: 112 SITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLAN--- 168
           S+  L  +V  +  L  L +   +L  LPS    +TNL  L LA N L+ LPDSL N   
Sbjct: 522 SLLGLGRNVGDIKSLRVLRVRNIRLTELPSSFENLTNLRVLDLASNELSVLPDSLGNVVY 581

Query: 169 ---------------LQQLRVLDLRHNKLNELPMVVYKLTSLKILYL-RFNRIKTVHPDI 212
                          L  LR L+L HN +  +   V  L SL+ L L  +  + ++    
Sbjct: 582 SRDIKNNNVIECKSGLVSLRTLNLYHNPIVSIADNVGNLESLEALNLIGWGNLTSLPDTF 641

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L+NL  L + D  I++LP + G+L++L  L +    LE+ P+   N   L  L++++ 
Sbjct: 642 VNLANLKKLDICDANIQQLPEDFGKLQSLEQLQIKSVKLEKFPESCKNMANLKRLEVRNT 701

Query: 273 ELVNIPDMLGNLINLTRLRLSYNR-LESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           ++  +     NL+NL  LRLS N+ LE++PE     ++L +  ++   +++LP+ +    
Sbjct: 702 KVATLFG-FENLVNLEFLRLSGNKNLETLPENFDNLINLKQLVIQNSKITALPENI---- 756

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
                                    S+  +  ++N+I+++P G F   ++L ++    N 
Sbjct: 757 ---------------------GNLKSLAILWMQNNKINRLP-GSFGELESLMELVADCNK 794

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           +  LP   G    L+ L L +NQI+ L ++   L NL   +++ N+L +LP S GNL+ L
Sbjct: 795 IPLLPDSFGKLKNLSVLRLNSNQITSLPDNFGKLTNLSECMINFNMLTRLPESFGNLKSL 854

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           + L L+ N+LESLP+    L  L+ L L  N+L  +P  IG L NL+  S+ +N+L+ IP
Sbjct: 855 RVLWLKANRLESLPDNFIDLASLEHLFLDFNRLKKIPEKIGLLKNLTKFSLAQNSLKIIP 914

Query: 512 EEIGTLENLHTLYLNDNT------CLNNIP--FELALCSNLQIMSLDNCP 553
           + +  L  L  L + +N       C+ N+    EL L SN     LDN P
Sbjct: 915 DSVTKLYELEELNMANNAIKRLPYCMGNLRKLMELNLNSN----KLDNLP 960



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 224/462 (48%), Gaps = 8/462 (1%)

Query: 106  LDLSKSSITHLPPSVEKLTHLEELYLYG-NKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
            L+L  + I  +  +V  L  LE L L G   L SLP     + NL  L + + ++  LP+
Sbjct: 603  LNLYHNPIVSIADNVGNLESLEALNLIGWGNLTSLPDTFVNLANLKKLDICDANIQQLPE 662

Query: 165  SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
                LQ L  L ++  KL + P     + +LK L +R  ++ T+    + L NL  L + 
Sbjct: 663  DFGKLQSLEQLQIKSVKLEKFPESCKNMANLKRLEVRNTKVATLF-GFENLVNLEFLRLS 721

Query: 225  DNK-IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
             NK +  LP     L NL  L + ++ +  LP+ IGN   L  L +Q+N++  +P   G 
Sbjct: 722  GNKNLETLPENFDNLINLKQLVIQNSKITALPENIGNLKSLAILWMQNNKINRLPGSFGE 781

Query: 284  LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
            L +L  L    N++  +P++  K  +L+   +    ++SLPD     LT+++   ++ N 
Sbjct: 782  LESLMELVADCNKIPLLPDSFGKLKNLSVLRLNSNQITSLPDNF-GKLTNLSECMINFNM 840

Query: 344  FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
             T  P        S+  +  + N+++ +P      A +L  + +  N L  +P  +G   
Sbjct: 841  LTRLPESF-GNLKSLRVLWLKANRLESLPDNFIDLA-SLEHLFLDFNRLKKIPEKIGLLK 898

Query: 404  GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
             LT+ +L  N +  + + +  L  LE L ++NN +K+LP  +GNLRKL  L+L  NKL++
Sbjct: 899  NLTKFSLAQNSLKIIPDSVTKLYELEELNMANNAIKRLPYCMGNLRKLMELNLNSNKLDN 958

Query: 464  LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
            LP+ +  L+ L  L + +NQ   L   +  +TNL  +    N++ +I  +I  L+ L  L
Sbjct: 959  LPDSMKNLERLSILKIHTNQFRRLSDCVYEMTNLKEIGASFNSISAIYRDISKLKKLRRL 1018

Query: 524  YLNDNTCLNNIPFELA-LCSNLQIMSLDNCPLSQIPSEIVVG 564
             L  N  +  +P  +A L   L ++ L    +    SE+  G
Sbjct: 1019 NLYKNN-IKKLPCTIAELNDTLVLLDLRRNQIEDFGSEVTFG 1059



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 224/452 (49%), Gaps = 25/452 (5%)

Query: 112 SITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQ 171
           S+  LP  + K  +L  L L  N+L  LP  I  +++L CL L  N L ++P+   ++  
Sbjct: 31  SLHSLPIGILKFKNLIVLSLSSNQLNKLPKSIAELSHLKCLNLQCNMLEAVPEFPPSI-- 88

Query: 172 LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
            R L+L  N +  +P  ++ L S++ LYL  N I  +   I  LS L +LSM+ N++ EL
Sbjct: 89  -RTLNLNKNLIKAIPKSIFNLKSIEKLYLNNNLIDFLPDSIAELSTLKLLSMQGNQLIEL 147

Query: 232 PPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG-NLINLTRL 290
           P +L  L +L  LD+A N ++ELP+       L TL  + N +  I  M   +L  L +L
Sbjct: 148 P-DLSGLPDLRHLDVAFNRIKELPRL---SPKLATLTARFNSIAKIDSMCSPSLSYLKKL 203

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L  N+++++P  +     +    ++   +  +P  + S L ++  + L  NK +  P+ 
Sbjct: 204 DLLGNQIKTIPAEIGNLNSVEMLYLQFNNIVEVPRSIFS-LKNLKQLHLGSNKISKLPAR 262

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
              +    Y I+F+               KNL+ +++ +N +T +P  +   V L  LNL
Sbjct: 263 LTGKAKKSYLIHFQ---------------KNLTVLDLSNNKITQIPKYITELVNLKVLNL 307

Query: 411 GTNQISKLSEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
            +N+I+ L    + +  L+VL LS N  L   PS I NL+ LK L     K+ES+P EI 
Sbjct: 308 RSNKIALLRGSFKKMKGLKVLKLSLNQQLGHFPSQILNLKSLKILLASFCKIESIPREIS 367

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            L  L+ LIL  N++ +LP++I HL  L  L +G    ++I +      N      +D  
Sbjct: 368 ELTNLEVLILNGNKIPALPKSIKHLAKLRILGLGRFGPENISDCEEYSRNESKKISDDRN 427

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            +  +P  +    NL+I++LD   +  +P  I
Sbjct: 428 RIKRLPDTITELQNLEILNLDGVEIEILPENI 459



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 237/479 (49%), Gaps = 33/479 (6%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           I  L+L+K+ I  +P S+  L  +E+LYL  N +  LP  I  ++ L  L +  N L  L
Sbjct: 88  IRTLNLNKNLIKAIPKSIFNLKSIEKLYLNNNLIDFLPDSIAELSTLKLLSMQGNQLIEL 147

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH----PDIQYLSNL 218
           PD L+ L  LR LD+  N++ ELP +  KL +L     RFN I  +     P + YL  L
Sbjct: 148 PD-LSGLPDLRHLDVAFNRIKELPRLSPKLATLTA---RFNSIAKIDSMCSPSLSYLKKL 203

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
            +L    N+I+ +P E+G L ++  L L  N++ E+P+ I +   L  L L  N++  +P
Sbjct: 204 DLLG---NQIKTIPAEIGNLNSVEMLYLQFNNIVEVPRSIFSLKNLKQLHLGSNKISKLP 260

Query: 279 DMLGN------LI----NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
             L        LI    NLT L LS N++  +P+ +++ V+L   N+    ++ L  G  
Sbjct: 261 ARLTGKAKKSYLIHFQKNLTVLDLSNNKITQIPKYITELVNLKVLNLRSNKIALL-RGSF 319

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF---EHNQIDKIPYGIFSRAKNLSKV 385
             +  +  + LS N+   +    P+Q  ++ S+        +I+ IP  I S   NL  +
Sbjct: 320 KKMKGLKVLKLSLNQQLGH---FPSQILNLKSLKILLASFCKIESIPREI-SELTNLEVL 375

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN--NLLKKLPS 443
            +  N + +LP  +     L  L LG      +S D +     E   +S+  N +K+LP 
Sbjct: 376 ILNGNKIPALPKSIKHLAKLRILGLGRFGPENIS-DCEEYSRNESKKISDDRNRIKRLPD 434

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
           +I  L+ L+ L+L+  ++E LP  IG L+++++LIL       LP +I  + +L  LS  
Sbjct: 435 TITELQNLEILNLDGVEIEILPENIGRLQKMKKLILNCGNFKQLPESICQIASLRILSCK 494

Query: 504 E-NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
              NL S+P  +  L+NL  L LN    L  +   +    +L+++ + N  L+++PS  
Sbjct: 495 SCRNLSSLPSGLSILKNLKVLVLNKCYSLLGLGRNVGDIKSLRVLRVRNIRLTELPSSF 553



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 238/500 (47%), Gaps = 66/500 (13%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N++ L LS + +  LP S+ +L+HL+ L L  N L ++P    +  ++  L L +N 
Sbjct: 41  KFKNLIVLSLSSNQLNKLPKSIAELSHLKCLNLQCNMLEAVPE---FPPSIRTLNLNKNL 97

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           + ++P S+ NL+ +  L L +N ++ LP  + +L++LK+L ++ N++  + PD+  L +L
Sbjct: 98  IKAIPKSIFNLKSIEKLYLNNNLIDFLPDSIAELSTLKLLSMQGNQLIEL-PDLSGLPDL 156

Query: 219 SMLSMRDNKIRELP---PELG------------------ELKNLVTLDLAHNHLEELPKE 257
             L +  N+I+ELP   P+L                    L  L  LDL  N ++ +P E
Sbjct: 157 RHLDVAFNRIKELPRLSPKLATLTARFNSIAKIDSMCSPSLSYLKKLDLLGNQIKTIPAE 216

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           IGN   +  L LQ N +V +P  + +L NL +L L  N++  +P  L+           G
Sbjct: 217 IGNLNSVEMLYLQFNNIVEVPRSIFSLKNLKQLHLGSNKISKLPARLT-----------G 265

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
            A  S       +LT ++   LS NK T  P    T+  ++  +N   N+I  +  G F 
Sbjct: 266 KAKKSYLIHFQKNLTVLD---LSNNKITQIPKY-ITELVNLKVLNLRSNKI-ALLRGSFK 320

Query: 378 RAKNLSKVNMKDNL-LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
           + K L  + +  N  L   P  +     L  L     +I  +  +I  L NLEVL+L+ N
Sbjct: 321 KMKGLKVLKLSLNQQLGHFPSQILNLKSLKILLASFCKIESIPREISELTNLEVLILNGN 380

Query: 437 LLKKLPSSIGNLRKLKCLDL------------------------EENKLESLPNEIGFLK 472
            +  LP SI +L KL+ L L                        + N+++ LP+ I  L+
Sbjct: 381 KIPALPKSIKHLAKLRILGLGRFGPENISDCEEYSRNESKKISDDRNRIKRLPDTITELQ 440

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
            L+ L L   ++  LP  IG L  +  L +   N + +PE I  + +L  L       L+
Sbjct: 441 NLEILNLDGVEIEILPENIGRLQKMKKLILNCGNFKQLPESICQIASLRILSCKSCRNLS 500

Query: 533 NIPFELALCSNLQIMSLDNC 552
           ++P  L++  NL+++ L+ C
Sbjct: 501 SLPSGLSILKNLKVLVLNKC 520



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 191/426 (44%), Gaps = 37/426 (8%)

Query: 59   VDVKKTVTVKHPESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSS----IT 114
            + +K     K PES K     K+ E     +     F     EN++NL+  + S    + 
Sbjct: 673  LQIKSVKLEKFPESCKNMANLKRLEVRNTKVATLFGF-----ENLVNLEFLRLSGNKNLE 727

Query: 115  HLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRV 174
             LP + + L +L++L +  +K+ +LP  IG + +L  L +  N +  LP S   L+ L  
Sbjct: 728  TLPENFDNLINLKQLVIQNSKITALPENIGNLKSLAILWMQNNKINRLPGSFGELESLME 787

Query: 175  LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
            L    NK+  LP    KL +L +L L  N+I ++  +   L+NLS   +  N +  LP  
Sbjct: 788  LVADCNKIPLLPDSFGKLKNLSVLRLNSNQITSLPDNFGKLTNLSECMINFNMLTRLPES 847

Query: 235  LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
             G LK+L  L L  N LE LP    +   L  L L  N L  IP+ +G L NLT+  L+ 
Sbjct: 848  FGNLKSLRVLWLKANRLESLPDNFIDLASLEHLFLDFNRLKKIPEKIGLLKNLTKFSLAQ 907

Query: 295  NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
            N L+ +P++++K   L E N+   A+  LP                      Y  G    
Sbjct: 908  NSLKIIPDSVTKLYELEELNMANNAIKRLP----------------------YCMGN--- 942

Query: 355  FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
               +  +N   N++D +P  +    + LS + +  N    L   +     L E+    N 
Sbjct: 943  LRKLMELNLNSNKLDNLPDSM-KNLERLSILKIHTNQFRRLSDCVYEMTNLKEIGASFNS 1001

Query: 415  ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK-LKCLDLEENKLESLPNEIGFLK- 472
            IS +  DI  L  L  L L  N +KKLP +I  L   L  LDL  N++E   +E+ F K 
Sbjct: 1002 ISAIYRDISKLKKLRRLNLYKNNIKKLPCTIAELNDTLVLLDLRRNQIEDFGSEVTFGKF 1061

Query: 473  ELQRLI 478
            E+Q + 
Sbjct: 1062 EIQAIF 1067



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 147/617 (23%), Positives = 244/617 (39%), Gaps = 138/617 (22%)

Query: 82  KEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           K P +     +K +L   ++N+  LDLS + IT +P  + +L +L+ L L  NK+A L  
Sbjct: 258 KLPARLTGKAKKSYLIHFQKNLTVLDLSNNKITQIPKYITELVNLKVLNLRSNKIALLRG 317

Query: 142 QIGYVTNLTCLGLAEN-SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
               +  L  L L+ N  L   P  + NL+ L++L     K+  +P  + +LT+L++L L
Sbjct: 318 SFKKMKGLKVLKLSLNQQLGHFPSQILNLKSLKILLASFCKIESIPREISELTNLEVLIL 377

Query: 201 RFNRIKTVHPDIQYLSNLSMLSM------------------------RDNKIRELPPELG 236
             N+I  +   I++L+ L +L +                          N+I+ LP  + 
Sbjct: 378 NGNKIPALPKSIKHLAKLRILGLGRFGPENISDCEEYSRNESKKISDDRNRIKRLPDTIT 437

Query: 237 ELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNR 296
           EL+NL  L+L    +E LP+ IG    +  L L       +P+ +  + +L  L     R
Sbjct: 438 ELQNLEILNLDGVEIEILPENIGRLQKMKKLILNCGNFKQLPESICQIASLRILSCKSCR 497

Query: 297 -LESVPETLS-----------KCV-------------HLNEFNVEGCALSSLPDGLLSSL 331
            L S+P  LS           KC               L    V    L+ LP     +L
Sbjct: 498 NLSSLPSGLSILKNLKVLVLNKCYSLLGLGRNVGDIKSLRVLRVRNIRLTELPSS-FENL 556

Query: 332 TSINNITLSRNKFTAYPSG-----------------GPTQFTSVYSINFEHNQIDKIPYG 374
           T++  + L+ N+ +  P                     +   S+ ++N  HN I  I   
Sbjct: 557 TNLRVLDLASNELSVLPDSLGNVVYSRDIKNNNVIECKSGLVSLRTLNLYHNPIVSIADN 616

Query: 375 I-----------------------FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLG 411
           +                       F    NL K+++ D  +  LP D G    L +L + 
Sbjct: 617 VGNLESLEALNLIGWGNLTSLPDTFVNLANLKKLDICDANIQQLPEDFGKLQSLEQLQIK 676

Query: 412 TNQISKLSEDIQN----------------------------------------------L 425
           + ++ K  E  +N                                              L
Sbjct: 677 SVKLEKFPESCKNMANLKRLEVRNTKVATLFGFENLVNLEFLRLSGNKNLETLPENFDNL 736

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
           +NL+ LV+ N+ +  LP +IGNL+ L  L ++ NK+  LP   G L+ L  L+   N++ 
Sbjct: 737 INLKQLVIQNSKITALPENIGNLKSLAILWMQNNKINRLPGSFGELESLMELVADCNKIP 796

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
            LP + G L NLS L +  N + S+P+  G L NL    +N N  L  +P       +L+
Sbjct: 797 LLPDSFGKLKNLSVLRLNSNQITSLPDNFGKLTNLSECMINFNM-LTRLPESFGNLKSLR 855

Query: 546 IMSLDNCPLSQIPSEIV 562
           ++ L    L  +P   +
Sbjct: 856 VLWLKANRLESLPDNFI 872



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 3/137 (2%)

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           +T + L  G  +G  ++++    +  L   I    NL VL LS+N L KLP SI  L  L
Sbjct: 9   ITEIILKEGYPIGSQKISVCGLSLHSLPIGILKFKNLIVLSLSSNQLNKLPKSIAELSHL 68

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           KCL+L+ N LE++P    F   ++ L L  N + ++P++I +L ++  L +  N +  +P
Sbjct: 69  KCLNLQCNMLEAVPE---FPPSIRTLNLNKNLIKAIPKSIFNLKSIEKLYLNNNLIDFLP 125

Query: 512 EEIGTLENLHTLYLNDN 528
           + I  L  L  L +  N
Sbjct: 126 DSIAELSTLKLLSMQGN 142


>gi|307180798|gb|EFN68662.1| Protein lap4 [Camponotus floridanus]
          Length = 2056

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 195/394 (49%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L  +P  + + + SL+ L L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEYVDKRHCSLPCIPDDILRYSRSLEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P+ I N   L   D   N +  +P     L NLT
Sbjct: 73  HRLPPDIQNFENLVELDVSRNDIPDIPENIKNLQALQVADFSSNPIPRLPAGFVQLRNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L SLP+ L S L  +  + L  N+    P
Sbjct: 133 VLGLNDMSLTNLPPDFGSLEALQSLELRENLLKSLPESL-SQLFKLERLDLGDNEIEELP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
           S                  I K+P         L ++ +  N L  LP ++G    L  L
Sbjct: 192 S-----------------HIGKLPA--------LQELWLDHNQLQHLPPEIGELKTLACL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++  L ++I  L +L  L LS N+++KLP  +G L+KL  L +++N+L +L   I
Sbjct: 227 DVSENRLEDLPDEIGGLESLTDLHLSQNVIEKLPDGLGELKKLTILKVDQNRLSTLNPSI 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + LQ LIL  N L+ LP +IG L NL+ L+V  N+LQ +P EIG L+ L  L L DN
Sbjct: 287 GKCENLQELILTENFLLELPVSIGKLCNLNNLNVDRNSLQFLPIEIGNLKKLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P E+  CS L ++ +    L  +P  ++
Sbjct: 347 K-LQYLPAEVGQCSALHVLDVSGNRLHYLPYSLI 379



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 188/404 (46%), Gaps = 52/404 (12%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  + I  LP +  +L  L +L L  N++  LP  I    NL  L ++ N +  +P+++ 
Sbjct: 44  LDANHIRDLPKNFFRLQRLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDIPENIK 103

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
           NLQ L+V D   N +  LP    +L +L +L L    +  + PD   L  L  L +R+N 
Sbjct: 104 NLQALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENL 163

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           ++ LP  L +L  L  LDL  N +EELP  IG    L  L L HN+L ++P  +G L  L
Sbjct: 164 LKSLPESLSQLFKLERLDLGDNEIEELPSHIGKLPALQELWLDHNQLQHLPPEIGELKTL 223

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF-TA 346
             L +S NRLE +P+ +     L + ++    +  LPDG L  L  +  + + +N+  T 
Sbjct: 224 ACLDVSENRLEDLPDEIGGLESLTDLHLSQNVIEKLPDG-LGELKKLTILKVDQNRLSTL 282

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            PS G                          + +NL ++ + +N L  LP+ +G      
Sbjct: 283 NPSIG--------------------------KCENLQELILTENFLLELPVSIG------ 310

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
                             L NL  L +  N L+ LP  IGNL+KL  L L +NKL+ LP 
Sbjct: 311 -----------------KLCNLNNLNVDRNSLQFLPIEIGNLKKLGVLSLRDNKLQYLPA 353

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           E+G    L  L +  N+L  LP ++ +L NL  + + EN  Q +
Sbjct: 354 EVGQCSALHVLDVSGNRLHYLPYSLINL-NLKAVWLSENQAQPM 396



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 172/336 (51%), Gaps = 27/336 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P +++ L  L+      N +  LP+    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPENIKNLQALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L+ L+ L+LR N L  LP  + +L  L+ L L  N I+ +   I  L  L  
Sbjct: 143 NLPPDFGSLEALQSLELRENLLKSLPESLSQLFKLERLDLGDNEIEELPSHIGKLPALQE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPE+GELK L  LD++ N LE+LP EIG    L  L L  N +  +PD 
Sbjct: 203 LWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPDEIGGLESLTDLHLSQNVIEKLPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           LG L  LT L++  NRL ++  ++ KC +L E  +    L  LP   +  L ++NN+ + 
Sbjct: 263 LGELKKLTILKVDQNRLSTLNPSIGKCENLQELILTENFLLELPVS-IGKLCNLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN           QF  +   N                 K L  ++++DN L  LP ++G
Sbjct: 322 RNSL---------QFLPIEIGNL----------------KKLGVLSLRDNKLQYLPAEVG 356

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
               L  L++  N++  L   + NL NL+ + LS N
Sbjct: 357 QCSALHVLDVSGNRLHYLPYSLINL-NLKAVWLSEN 391


>gi|109044385|ref|XP_001085657.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like [Macaca mulatta]
          Length = 560

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 145/497 (29%), Positives = 231/497 (46%), Gaps = 55/497 (11%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +D S  S+T +P  +   T LEE++L  N++  +P +I  + N+  L L +N+L SL  +
Sbjct: 30  IDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPA 89

Query: 166 LANLQQLRVLDLRHN------------------------KLNELPMVVYK-LTSLKILYL 200
           L  L  L  LDL +N                         L E+P+V+ K L  L++L L
Sbjct: 90  LGLLSSLERLDLSYNPIFSSSLLVVSFLHALRELRLYQTDLKEIPVVICKNLHHLELLGL 149

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
             N +K +  +I   + L  + ++ N+    P EL  L NL  +DL  N +  +P+EIG+
Sbjct: 150 TGNHLKCLPKEIVNQTKLREIYLKRNQFEAFPQELCVLYNLEIIDLDENKIGAIPEEIGH 209

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
            T L    +  N L  +P  L +   L+ L LS+N L S+P++L++   + E  + G  L
Sbjct: 210 LTGLQKFYVASNNLPVLPASLCHCSQLSVLDLSHNLLHSIPKSLTELRKMTEIGLSGNRL 269

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
             +P  L+   TS++ + L  N       G   +  ++  ++   N +D  P  I +  K
Sbjct: 270 EKVP-YLICRWTSLHLLYLG-NTGLHRLRGSFRRLVNLRCLDLSQNHLDHCPLQICA-LK 326

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           NL  + + DN +  LP +LG+   L  L L  N+     E++ +L +LE L +  +   K
Sbjct: 327 NLEVLGLDDNKIGQLPSELGSLSKLKILGLTGNEFLSFPEEVLSLASLEKLYIGQDQGFK 386

Query: 441 L---PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L   P  I  L+ LK L +E N LE LP  +G +  L+ L  + N L  LP AI     L
Sbjct: 387 LTYVPEHIRKLQSLKELYIENNHLEYLPVSLGSMPNLEVLDCRHNLLKQLPDAICQAQAL 446

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
             L + +N L  +PE + +L NL  L L DN                        P+ + 
Sbjct: 447 KELLLEDNLLTHLPENLDSLVNLKVLTLMDN------------------------PMEEP 482

Query: 558 PSEIVVGGPSLIIRYLK 574
           P E+   G  +I +YLK
Sbjct: 483 PKEVCAEGNEVIWKYLK 499



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 161/319 (50%), Gaps = 29/319 (9%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+  +DL ++ I  +P  +  LT L++ Y+  N L  LP+ + + + L+ L L+ N
Sbjct: 185 CVLYNLEIIDLDENKIGAIPEEIGHLTGLQKFYVASNNLPVLPASLCHCSQLSVLDLSHN 244

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L S+P SL  L+++  + L  N+L ++P ++ + TSL +LYL    +  +    + L N
Sbjct: 245 LLHSIPKSLTELRKMTEIGLSGNRLEKVPYLICRWTSLHLLYLGNTGLHRLRGSFRRLVN 304

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N +   P ++  LKNL  L L  N + +LP E+G+ + L  L L  NE ++ 
Sbjct: 305 LRCLDLSQNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLSKLKILGLTGNEFLSF 364

Query: 278 PDMLGNLINLTRLRLSYN---RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           P+ + +L +L +L +  +   +L  VPE + K   L E  +E   L  LP     SL S+
Sbjct: 365 PEEVLSLASLEKLYIGQDQGFKLTYVPEHIRKLQSLKELYIENNHLEYLP----VSLGSM 420

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            N+ +                     ++  HN + ++P  I  +A+ L ++ ++DNLLT 
Sbjct: 421 PNLEV---------------------LDCRHNLLKQLPDAI-CQAQALKELLLEDNLLTH 458

Query: 395 LPLDLGTWVGLTELNLGTN 413
           LP +L + V L  L L  N
Sbjct: 459 LPENLDSLVNLKVLTLMDN 477


>gi|195486155|ref|XP_002091384.1| GE13624 [Drosophila yakuba]
 gi|194177485|gb|EDW91096.1| GE13624 [Drosophila yakuba]
          Length = 849

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 197/386 (51%), Gaps = 26/386 (6%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           LD  +  L + P V     +L+ LYL   R++ + P + Y   L +L +  N +  +P  
Sbjct: 22  LDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLESIPQA 81

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
           +G L+ L  LDL  N +  +P+EI +C  L  LDL  N L  +PD + +LI+L  L L+ 
Sbjct: 82  IGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELLLNE 141

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
             LE +P    + V+L    +    L +LP  ++  L ++  + +  N+FT  P     +
Sbjct: 142 TYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVR-LINLQRLDIGGNEFTELPEVV-GE 199

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW------------ 402
             S+  +  + NQI ++   I  + ++L       NLL +LP +L  W            
Sbjct: 200 LKSLRELWIDFNQIRRVSANI-GKLRDLQHFEANGNLLDTLPSELSNWRNVEVLSICSNS 258

Query: 403 -------VG----LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
                  VG    L  L   +N +++L + I  L  LE LVLS+N L +LPS+IG LR L
Sbjct: 259 LEAFPFSVGMLKSLVTLKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSL 318

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           + L  ++N+L  LP+E+   ++L  L + +NQL +LP+ IG+L+ +  L+V  N + ++P
Sbjct: 319 RFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVVNNYINALP 378

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFE 537
             +  L NL +++L+DN     +P +
Sbjct: 379 VSMLNLVNLTSMWLSDNQSQPLVPLQ 404



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 194/386 (50%), Gaps = 5/386 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           +EE I  LD S + +T  P   +    LEELYL   +L +LP Q+ Y   L  L +  N+
Sbjct: 15  REEVIDKLDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNN 74

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L S+P ++ +L+QL+ LDL  N +  +P  +     L  L L  N ++ +   I  L +L
Sbjct: 75  LESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISL 134

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L + +  +  LP   G L NL  L+L  N+L  LPK +     L  LD+  NE   +P
Sbjct: 135 QELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELP 194

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           +++G L +L  L + +N++  V   + K   L  F   G  L +LP   LS+  ++  ++
Sbjct: 195 EVVGELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPSE-LSNWRNVEVLS 253

Query: 339 LSRNKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
           +  N   A+P S G     S+ ++  E N + ++P  I S  + L ++ +  N L  LP 
Sbjct: 254 ICSNSLEAFPFSVG--MLKSLVTLKCESNGLTELPDSI-SYLEQLEELVLSHNKLIRLPS 310

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
            +G    L  L    NQ+ +L +++ +   L VL ++NN L  LP +IGNL K+K L++ 
Sbjct: 311 TIGMLRSLRFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVV 370

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQ 483
            N + +LP  +  L  L  + L  NQ
Sbjct: 371 NNYINALPVSMLNLVNLTSMWLSDNQ 396



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 160/326 (49%), Gaps = 28/326 (8%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           +N+ +E   CK  ++ +LDLS +S+  LP ++  L  L+EL L    L  LP+  G + N
Sbjct: 99  VNVPEEIKSCK--HLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPANFGRLVN 156

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L L  N+L +LP S+  L  L+ LD+  N+  ELP VV +L SL+ L++ FN+I+ V
Sbjct: 157 LRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELPEVVGELKSLRELWIDFNQIRRV 216

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
             +I  L +L       N +  LP EL   +N+  L +  N LE  P  +G    LVTL 
Sbjct: 217 SANIGKLRDLQHFEANGNLLDTLPSELSNWRNVEVLSICSNSLEAFPFSVGMLKSLVTLK 276

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
            + N L  +PD +  L  L  L LS+N+L  +P T+     L     +   L  LPD L 
Sbjct: 277 CESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPDELC 336

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           S                        Q  SV S+   +NQ+  +P  I + +K +  +N+ 
Sbjct: 337 S-----------------------CQQLSVLSV--ANNQLSALPQNIGNLSK-MKVLNVV 370

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQ 414
           +N + +LP+ +   V LT + L  NQ
Sbjct: 371 NNYINALPVSMLNLVNLTSMWLSDNQ 396



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 75/133 (56%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           ++++ L    + +T LP S+  L  LEEL L  NKL  LPS IG + +L  L   +N L 
Sbjct: 270 KSLVTLKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLR 329

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LPD L + QQL VL + +N+L+ LP  +  L+ +K+L +  N I  +   +  L NL+ 
Sbjct: 330 QLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVNLTS 389

Query: 221 LSMRDNKIRELPP 233
           + + DN+ + L P
Sbjct: 390 MWLSDNQSQPLVP 402



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 1/158 (0%)

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           + +L+     ++   E  Q+   LE L LS   L+ LP  +   + L+ L +  N LES+
Sbjct: 19  IDKLDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLESI 78

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P  IG L++LQ L L  N +V++P  I    +L++L +  N+LQ +P+ I +L +L  L 
Sbjct: 79  PQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELL 138

Query: 525 LNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           LN+ T L  +P       NL+I+ L    L  +P  +V
Sbjct: 139 LNE-TYLEFLPANFGRLVNLRILELRLNNLMTLPKSMV 175



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 75/153 (49%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L +  +S+   P SV  L  L  L    N L  LP  I Y+  L  L L+ N L  
Sbjct: 248 NVEVLSICSNSLEAFPFSVGMLKSLVTLKCESNGLTELPDSISYLEQLEELVLSHNKLIR 307

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP ++  L+ LR L    N+L +LP  +     L +L +  N++  +  +I  LS + +L
Sbjct: 308 LPSTIGMLRSLRFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVL 367

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           ++ +N I  LP  +  L NL ++ L+ N  + L
Sbjct: 368 NVVNNYINALPVSMLNLVNLTSMWLSDNQSQPL 400


>gi|60327196|gb|AAX19021.1| Cf-2.3 [Solanum pimpinellifolium]
          Length = 1112

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 176/574 (30%), Positives = 276/574 (48%), Gaps = 90/574 (15%)

Query: 98  CKEENILNLDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLA 155
           C   ++  LDLS++++   +P S+  L +L  L+LYGN+L  S+P +IGY+ +L  LGL+
Sbjct: 260 CYLRSLTYLDLSENALNGSIPASLGNLNNLSFLFLYGNQLSGSIPEEIGYLRSLNVLGLS 319

Query: 156 ENSLT-SLPDSLANLQQLRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHP-DI 212
           EN+L  S+P SL NL+ L  L+L +N+L+  +P  +  L +L +LYL  N++    P  +
Sbjct: 320 ENALNGSIPASLGNLKNLSRLNLVNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASL 379

Query: 213 QYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQ 270
             L+NLSML + +N++   +P  LG L NL  L L +N L   +P+EIG  + L  LDL 
Sbjct: 380 GNLNNLSMLYLYNNQLSGSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLSSLTYLDLS 439

Query: 271 HNELVN-IPDMLGNLINLTRLRLSYNRL-ESVPETLSKCVHLNEFNVEGCAL-SSLPDGL 327
           +N +   IP   GN+ NL  L L  N+L  SVPE +     LN  ++   AL  S+P   
Sbjct: 440 NNSINGFIPASFGNMSNLAFLFLYENQLASSVPEEIGYLRSLNVLDLSENALNGSIPASF 499

Query: 328 -----------------------LSSLTSINNITLSRNKFTAY--PSGG----------- 351
                                  +  L S+N + LS N        S G           
Sbjct: 500 GNLNNLSRLNLVNNQLSGSIPEEIGYLRSLNVLDLSENALNGSIPASFGNLNNLSRLNLV 559

Query: 352 --------PTQFTSVYSIN---FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDL 399
                   P +   + S+N      N ++           NLS + + +N L+ S+P ++
Sbjct: 560 NNQLSGSIPEEIGYLRSLNDLGLSENALNGSIPASLGNLNNLSMLYLYNNQLSGSIPEEI 619

Query: 400 GTWVGLTELNLGTNQISKL-SEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLE 457
           G    LT L+LG N ++ L      N+ NL+ L+L+ NNL+ ++PSS+ NL  L+ L + 
Sbjct: 620 GYLSSLTYLSLGNNSLNGLIPASFGNMRNLQALILNDNNLIGEIPSSVCNLTSLEVLYMP 679

Query: 458 ENKLES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQ-SIPEEI 514
            N L+  +P  +G +  LQ L + SN     LP +I +LT+L  L  G NNL+ +IP+  
Sbjct: 680 RNNLKGKVPQCLGNISNLQVLSMSSNSFSGELPSSISNLTSLQILDFGRNNLEGAIPQCF 739

Query: 515 GTLENLH------------------------TLYLNDNTCLNNIPFELALCSNLQIMSLD 550
           G + +L                         +L L+ N   + IP  L  C  LQ++ L 
Sbjct: 740 GNISSLEVFDMQNNKLSGTLPTNFSIGCSLISLNLHGNELEDEIPRSLDNCKKLQVLDLG 799

Query: 551 NCPLSQIPSEIVVGGPSLIIRYL---KMQGPYRT 581
           +  L+      +   P L +  L   K+ GP R+
Sbjct: 800 DNQLNDTFPMWLGTLPELRVLRLTSNKLHGPIRS 833



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 184/516 (35%), Positives = 269/516 (52%), Gaps = 56/516 (10%)

Query: 92  EKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLT 150
           E  +LR   +  L ++    SI   P SV  L +L  LYLY N+L  S+P +I Y+ +LT
Sbjct: 162 EIGYLRSLTKLSLGINFLSGSI---PASVGNLNNLSFLYLYNNQLSGSIPEEISYLRSLT 218

Query: 151 CLGLAENSLT-SLPDSLAN------------------------LQQLRVLDLRHNKLN-E 184
            L L++N+L  S+P SL N                        L+ L  LDL  N LN  
Sbjct: 219 ELDLSDNALNGSIPASLGNMNNLSFLFLYGNQLSGSIPEEICYLRSLTYLDLSENALNGS 278

Query: 185 LPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIR-ELPPELGELKNLV 242
           +P  +  L +L  L+L  N++    P+ I YL +L++L + +N +   +P  LG LKNL 
Sbjct: 279 IPASLGNLNNLSFLFLYGNQLSGSIPEEIGYLRSLNVLGLSENALNGSIPASLGNLKNLS 338

Query: 243 TLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE-S 299
            L+L +N L   +P  +GN   L  L L +N+L   IP  LGNL NL+ L L  N+L  S
Sbjct: 339 RLNLVNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSMLYLYNNQLSGS 398

Query: 300 VPETLSKCVHLNEFNVEGCALS-SLPD--GLLSSLTSINNITLSRNKFTAYPSGGPTQFT 356
           +P +L    +L+   +    LS S+P+  G LSSLT ++   LS N    +    P  F 
Sbjct: 399 IPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLSSLTYLD---LSNNSINGFI---PASFG 452

Query: 357 SVYSINF----EHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLG 411
           ++ ++ F    E+     +P  I    ++L+ +++ +N L  S+P   G    L+ LNL 
Sbjct: 453 NMSNLAFLFLYENQLASSVPEEI-GYLRSLNVLDLSENALNGSIPASFGNLNNLSRLNLV 511

Query: 412 TNQIS-KLSEDIQNLVNLEVLVLSNNLLK-KLPSSIGNLRKLKCLDLEENKLE-SLPNEI 468
            NQ+S  + E+I  L +L VL LS N L   +P+S GNL  L  L+L  N+L  S+P EI
Sbjct: 512 NNQLSGSIPEEIGYLRSLNVLDLSENALNGSIPASFGNLNNLSRLNLVNNQLSGSIPEEI 571

Query: 469 GFLKELQRLILQSNQL-VSLPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTLENLHTLYLN 526
           G+L+ L  L L  N L  S+P ++G+L NLS L +  N L  SIPEEIG L +L  L L 
Sbjct: 572 GYLRSLNDLGLSENALNGSIPASLGNLNNLSMLYLYNNQLSGSIPEEIGYLSSLTYLSLG 631

Query: 527 DNTCLNNIPFELALCSNLQIMSL-DNCPLSQIPSEI 561
           +N+    IP       NLQ + L DN  + +IPS +
Sbjct: 632 NNSLNGLIPASFGNMRNLQALILNDNNLIGEIPSSV 667



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 148/432 (34%), Positives = 231/432 (53%), Gaps = 44/432 (10%)

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT-SLPDSLANLQQLRVLD 176
           PS+E L  L +  +YG    ++P +IG +TNL  L L  N ++ ++P  +  L +L+++ 
Sbjct: 95  PSLENL-DLSKNNIYG----TIPPEIGNLTNLVYLDLNNNQISGTIPPQIGLLAKLQIIR 149

Query: 177 LRHNKLNE-LPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSMLSMRDNKIR-ELPP 233
           + HN+LN  +P  +  L SL  L L  N +    P  +  L+NLS L + +N++   +P 
Sbjct: 150 IFHNQLNGFIPKEIGYLRSLTKLSLGINFLSGSIPASVGNLNNLSFLYLYNNQLSGSIPE 209

Query: 234 ELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELV-NIPDMLGNLINLTRLR 291
           E+  L++L  LDL+ N L   +P  +GN   L  L L  N+L  +IP+ +  L +LT L 
Sbjct: 210 EISYLRSLTELDLSDNALNGSIPASLGNMNNLSFLFLYGNQLSGSIPEEICYLRSLTYLD 269

Query: 292 LSYNRLE-SVPETLSKCVHLNEFNVEGCALS-SLPDGLLSSLTSINNITLSRNKFTAYPS 349
           LS N L  S+P +L    +L+   + G  LS S+P+  +  L S+N + LS N       
Sbjct: 270 LSENALNGSIPASLGNLNNLSFLFLYGNQLSGSIPEE-IGYLRSLNVLGLSENALNG--- 325

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTEL 408
                                IP  +    KNLS++N+ +N L+ S+P  LG    L+ L
Sbjct: 326 --------------------SIPASL-GNLKNLSRLNLVNNQLSGSIPASLGNLNNLSML 364

Query: 409 NLGTNQIS-KLSEDIQNLVNLEVLVLSNNLLK-KLPSSIGNLRKLKCLDLEENKLE-SLP 465
            L  NQ+S  +   + NL NL +L L NN L   +P+S+GNL  L  L L  N+L  S+P
Sbjct: 365 YLYNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSRLYLYNNQLSGSIP 424

Query: 466 NEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNL-QSIPEEIGTLENLHTL 523
            EIG+L  L  L L +N +   +P + G+++NL++L + EN L  S+PEEIG L +L+ L
Sbjct: 425 EEIGYLSSLTYLDLSNNSINGFIPASFGNMSNLAFLFLYENQLASSVPEEIGYLRSLNVL 484

Query: 524 YLNDNTCLNNIP 535
            L++N    +IP
Sbjct: 485 DLSENALNGSIP 496



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 119/339 (35%), Positives = 181/339 (53%), Gaps = 13/339 (3%)

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDML 281
           ++N    +PPE+G L NLV LDL +N +   +P +IG    L  + + HN+L   IP  +
Sbjct: 104 KNNIYGTIPPEIGNLTNLVYLDLNNNQISGTIPPQIGLLAKLQIIRIFHNQLNGFIPKEI 163

Query: 282 GNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALS-SLPDGLLSSLTSINNITL 339
           G L +LT+L L  N L  S+P ++    +L+   +    LS S+P+  +S L S+  + L
Sbjct: 164 GYLRSLTKLSLGINFLSGSIPASVGNLNNLSFLYLYNNQLSGSIPEE-ISYLRSLTELDL 222

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQID-KIPYGIFSRAKNLSKVNMKDNLLT-SLPL 397
           S N              ++  +    NQ+   IP  I    ++L+ +++ +N L  S+P 
Sbjct: 223 SDNALNGSIPASLGNMNNLSFLFLYGNQLSGSIPEEI-CYLRSLTYLDLSENALNGSIPA 281

Query: 398 DLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVLSNNLLK-KLPSSIGNLRKLKCLD 455
            LG    L+ L L  NQ+S  + E+I  L +L VL LS N L   +P+S+GNL+ L  L+
Sbjct: 282 SLGNLNNLSFLFLYGNQLSGSIPEEIGYLRSLNVLGLSENALNGSIPASLGNLKNLSRLN 341

Query: 456 LEENKLE-SLPNEIGFLKELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGENNLQ-SIPE 512
           L  N+L  S+P  +G L  L  L L +NQL  S+P ++G+L NLS L +  N L  SIP 
Sbjct: 342 LVNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPA 401

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
            +G L NL  LYL +N    +IP E+   S+L  + L N
Sbjct: 402 SLGNLNNLSRLYLYNNQLSGSIPEEIGYLSSLTYLDLSN 440



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 222/471 (47%), Gaps = 62/471 (13%)

Query: 137 ASLPSQIGYVTNLTCLGLAENSLT-------------------------SLPDSLANLQQ 171
            S+P +IGY+ +L  L L+EN+L                          S+P+ +  L+ 
Sbjct: 517 GSIPEEIGYLRSLNVLDLSENALNGSIPASFGNLNNLSRLNLVNNQLSGSIPEEIGYLRS 576

Query: 172 LRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIR 229
           L  L L  N LN  +P  +  L +L +LYL  N++    P+ I YLS+L+ LS+ +N + 
Sbjct: 577 LNDLGLSENALNGSIPASLGNLNNLSMLYLYNNQLSGSIPEEIGYLSSLTYLSLGNNSLN 636

Query: 230 EL-PPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLIN 286
            L P   G ++NL  L L  N+L  E+P  + N T L  L +  N L   +P  LGN+ N
Sbjct: 637 GLIPASFGNMRNLQALILNDNNLIGEIPSSVCNLTSLEVLYMPRNNLKGKVPQCLGNISN 696

Query: 287 LTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           L  L +S N     +P ++S    L   +     L         +++S+    +  NK +
Sbjct: 697 LQVLSMSSNSFSGELPSSISNLTSLQILDFGRNNLEGAIPQCFGNISSLEVFDMQNNKLS 756

Query: 346 AYPSGGPTQFT---SVYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLG 400
                 PT F+   S+ S+N   N++ D+IP  +    K L  +++ DN L  + P+ LG
Sbjct: 757 GTL---PTNFSIGCSLISLNLHGNELEDEIPRSL-DNCKKLQVLDLGDNQLNDTFPMWLG 812

Query: 401 TWVGLTELNLGTNQIS---KLSEDIQNLVNLEVLVLSNNLLKK-LPSSIG-NLRKLKCLD 455
           T   L  L L +N++    + S       +L ++ LS N   + LP+S+  +L+ ++ +D
Sbjct: 813 TLPELRVLRLTSNKLHGPIRSSRAEIMFPDLRIIDLSRNAFSQDLPTSLFEHLKGMRTVD 872

Query: 456 --LEENKLESLPNEI------GFLKELQRLI-------LQSNQLVS-LPRAIGHLTNLSY 499
             +EE   ES  ++       G   E+ R++       L SN+    +P  +G L  +  
Sbjct: 873 KTMEEPSYESYYDDSVVVVTKGLELEIVRILSLYTVIDLSSNKFEGHIPSVLGDLIAIRI 932

Query: 500 LSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
           L+V  N LQ  IP  +G+L  L +L L+ N     IP +LA  + L+ ++L
Sbjct: 933 LNVSHNALQGYIPSSLGSLSILESLDLSFNQLSGEIPQQLASLTFLEFLNL 983



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 67/143 (46%), Gaps = 25/143 (17%)

Query: 422 IQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLIL 479
             +L +LE L LS NN+   +P  IGNL  L  LDL  N++  ++P +IG L +LQ + +
Sbjct: 91  FSSLPSLENLDLSKNNIYGTIPPEIGNLTNLVYLDLNNNQISGTIPPQIGLLAKLQIIRI 150

Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
             NQL                         IP+EIG L +L  L L  N    +IP  + 
Sbjct: 151 FHNQLNGF----------------------IPKEIGYLRSLTKLSLGINFLSGSIPASVG 188

Query: 540 LCSNLQIMSLDNCPLS-QIPSEI 561
             +NL  + L N  LS  IP EI
Sbjct: 189 NLNNLSFLYLYNNQLSGSIPEEI 211


>gi|426250981|ref|XP_004019210.1| PREDICTED: leucine-rich repeat-containing protein 1 [Ovis aries]
          Length = 473

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 175/344 (50%), Gaps = 27/344 (7%)

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L  L  L + DN+I+ LPPE+     LV LD++ N + E+P+ I  C  L   D   N L
Sbjct: 7   LVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPL 66

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+    L NLT L ++   L+S+PE +    +L    +    L+ LPD L       
Sbjct: 67  TRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL------- 119

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                             TQ   +  ++  +N+I  +P  I +   +L  + +  N L+ 
Sbjct: 120 ------------------TQLRRLEELDLGNNEIYNLPESIGALL-HLKDLWLDGNQLSE 160

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP ++G    L  L++  N++ +L E+I  L +L  LV+S NLL+ LP  IG L+KL  L
Sbjct: 161 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSIL 220

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            +++N+L  LP  +G  + L  L+L  N+L++LP++IG L  LS L+   N L S+P+EI
Sbjct: 221 KVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 280

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           G   +L    + DN  L  IP E++  + L ++ +    LS +P
Sbjct: 281 GGCCSLTVFCVRDNR-LTRIPAEVSRAAELHVLDVAGNRLSHLP 323



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 113/318 (35%), Positives = 167/318 (52%), Gaps = 8/318 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 33  LVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 92

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 93  PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 152

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  +PD +G
Sbjct: 153 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIG 212

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE +  C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 213 KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKS-IGKLKKLSNLNADRN 271

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + SRA  L  +++  N L+ LPL L 
Sbjct: 272 KLVSLPKEIGGCCSLT-VFCV--RDNRLTRIPAEV-SRAAELHVLDVAGNRLSHLPLSL- 326

Query: 401 TWVGLTELNLGTNQISKL 418
           T + L  L L  NQ   L
Sbjct: 327 TALNLKALWLSDNQAQPL 344



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 155/324 (47%), Gaps = 56/324 (17%)

Query: 264 LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSL 323
           L  L L  NE+  +P  + N + L  L +S N +  +PE++S C  L   +  G  L+ L
Sbjct: 10  LRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRL 69

Query: 324 PDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           P+    L +LT  S+N+I+L            P    ++Y                    
Sbjct: 70  PESFPELQNLTCLSVNDISLQ---------SLPENIGNLY-------------------- 100

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
            NL+ + +++NLLT LP  L     L EL+LG N+I  L E I  L++L+ L L  N L 
Sbjct: 101 -NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS 159

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
           +LP  IGNL+ L CLD+ EN+LE LP EI  L  L  L++  N L  LP  IG L  LS 
Sbjct: 160 ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSI 219

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN----------------------NIPFE 537
           L V +N L  +PE +G  E+L  L L +N  L                       ++P E
Sbjct: 220 LKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 279

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +  C +L +  + +  L++IP+E+
Sbjct: 280 IGGCCSLTVFCVRDNRLTRIPAEV 303



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 178/344 (51%), Gaps = 6/344 (1%)

Query: 141 SQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           +Q   +  L  LGL++N +  LP  +AN  QL  LD+  N + E+P  +    +L+I   
Sbjct: 2   AQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADF 61

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
             N +  +      L NL+ LS+ D  ++ LP  +G L NL +L+L  N L  LP  +  
Sbjct: 62  SGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQ 121

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  LDL +NE+ N+P+ +G L++L  L L  N+L  +P+ +    +L   +V    L
Sbjct: 122 LRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRL 181

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
             LP+  +S LTS+ ++ +S+N     P G G  +  S+  +  + N++ ++P  +    
Sbjct: 182 ERLPEE-ISGLTSLTDLVISQNLLEMLPDGIGKLKKLSILKV--DQNRLTQLPEAV-GDC 237

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           ++L+++ + +N L +LP  +G    L+ LN   N++  L ++I    +L V  + +N L 
Sbjct: 238 ESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLT 297

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           ++P+ +    +L  LD+  N+L  LP  +  L  L+ L L  NQ
Sbjct: 298 RIPAEVSRAAELHVLDVAGNRLSHLPLSLTALN-LKALWLSDNQ 340



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 174/343 (50%), Gaps = 4/343 (1%)

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
           +L  L +L L  N++  LP +I     L  L ++ N +  +P+S++  + L++ D   N 
Sbjct: 6   QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNP 65

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L  LP    +L +L  L +    ++++  +I  L NL+ L +R+N +  LP  L +L+ L
Sbjct: 66  LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL 125

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
             LDL +N +  LP+ IG    L  L L  N+L  +P  +GNL NL  L +S NRLE +P
Sbjct: 126 EELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLP 185

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
           E +S    L +  +    L  LPDG +  L  ++ + + +N+ T  P        S+  +
Sbjct: 186 EEISGLTSLTDLVISQNLLEMLPDG-IGKLKKLSILKVDQNRLTQLPEAV-GDCESLTEL 243

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
               N++  +P  I  + K LS +N   N L SLP ++G    LT   +  N+++++  +
Sbjct: 244 VLTENRLLTLPKSI-GKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAE 302

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           +     L VL ++ N L  LP S+  L  LK L L +N+ + L
Sbjct: 303 VSRAAELHVLDVAGNRLSHLPLSLTAL-NLKALWLSDNQAQPL 344



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/234 (35%), Positives = 131/234 (55%), Gaps = 4/234 (1%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +L+L ++ +T+LP S+ +L  LEEL L  N++ +LP  IG + +L  L L  N L+ 
Sbjct: 101 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 160

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + NL+ L  LD+  N+L  LP  +  LTSL  L +  N ++ +   I  L  LS+L
Sbjct: 161 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSIL 220

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++ +LP  +G+ ++L  L L  N L  LPK IG    L  L+   N+LV++P  +
Sbjct: 221 KVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 280

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           G   +LT   +  NRL  +P  +S+   L+  +V G  LS LP     SLT++N
Sbjct: 281 GGCCSLTVFCVRDNRLTRIPAEVSRAAELHVLDVAGNRLSHLP----LSLTALN 330



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 98/186 (52%), Gaps = 1/186 (0%)

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
           F +   L K+ + DN +  LP ++  ++ L EL++  N I ++ E I     L++   S 
Sbjct: 4   FFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSG 63

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N L +LP S   L+ L CL + +  L+SLP  IG L  L  L L+ N L  LP ++  L 
Sbjct: 64  NPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLR 123

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            L  L +G N + ++PE IG L +L  L+L+ N  L+ +P E+    NL  + +    L 
Sbjct: 124 RLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQ-LSELPQEIGNLKNLLCLDVSENRLE 182

Query: 556 QIPSEI 561
           ++P EI
Sbjct: 183 RLPEEI 188



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 62/106 (58%), Gaps = 1/106 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E++  L L+++ +  LP S+ KL  L  L    NKL SLP +IG   +LT   + +N LT
Sbjct: 238 ESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLT 297

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK 206
            +P  ++   +L VLD+  N+L+ LP+ +  L +LK L+L  N+ +
Sbjct: 298 RIPAEVSRAAELHVLDVAGNRLSHLPLSLTAL-NLKALWLSDNQAQ 342


>gi|126338397|ref|XP_001365516.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like [Monodelphis domestica]
          Length = 570

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 215/423 (50%), Gaps = 31/423 (7%)

Query: 120 VEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL--TSLP--DSLANLQQLRV- 174
           +  LT+L+ LYL  N +  +   +G ++NL  L  + N L  T+LP    L  L+QLR+ 
Sbjct: 74  IHNLTNLKILYLNNNDMKLICKDLGELSNLQSLDFSNNPLVPTTLPVIAHLRALRQLRLY 133

Query: 175 --------------------LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
                               L L HNKL +LP  +   T LK +YL+ N  +    ++  
Sbjct: 134 KIQLEKFPIQICKCLHHLELLGLSHNKLKDLPKEIVNQTKLKEIYLQDNHFENFPQELCA 193

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL ++ +  N+I  +P E+  L  L    +A N +  LP  +G+C  L+ LD+ +N L
Sbjct: 194 LYNLEIIDLEQNRIPVIPDEISSLTKLEKFFIASNVVTVLPDSLGSCNKLIVLDVSNNYL 253

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
            N+P  L  L  +  L LS N +E VP  + K   L+   ++   L +L       L ++
Sbjct: 254 HNLPSTLKELTEIRELGLSGNCMEKVPRLICKWTMLHLLYMKNTCLKTLRRS-FKRLLNV 312

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + LS+N F  +P        ++  ++ + N+I ++P  + +  K L  +++  N    
Sbjct: 313 TILDLSQNYFEFFPQEI-CALKNLELLSLDDNRICQVPPEVVNLVK-LKALSLTGNNFMI 370

Query: 395 LPLDLGTWVGLTELNLGTNQISKL---SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
            P ++     L +L LG +Q +KL   SE+I  L NL+ L L NN L+ LP S+G+++ L
Sbjct: 371 FPEEVLLIESLEQLYLGQDQGTKLTYISENIMKLTNLKELYLENNSLENLPDSLGSIKTL 430

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           + LD   N+L+ LP+ I  +  L+ L+L++NQL +LP  +  L NL  L++  N +++ P
Sbjct: 431 EMLDCHNNQLKELPDSICEISALKTLLLENNQLTALPLKMDELQNLQVLNLEGNPMEAPP 490

Query: 512 EEI 514
            E+
Sbjct: 491 PEV 493



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 188/416 (45%), Gaps = 34/416 (8%)

Query: 152 LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD 211
           L  +  +LT +P ++  L +L  L L +N L  +   ++ LT+LKILYL  N +K +  D
Sbjct: 37  LDASNKNLTFIPANILELWELEELHLENNVLEGIAREIHNLTNLKILYLNNNDMKLICKD 96

Query: 212 IQYLSNLSMLSMRDNKIRELP---PELGELKNLVTLDLAHNHLEELPKEIGNCTM-LVTL 267
           +  LSNL  L   +N +  +P   P +  L+ L  L L    LE+ P +I  C   L  L
Sbjct: 97  LGELSNLQSLDFSNNPL--VPTTLPVIAHLRALRQLRLYKIQLEKFPIQICKCLHHLELL 154

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
            L HN+L ++P  + N   L  + L  N  E+ P+ L    +L   ++E   +  +PD +
Sbjct: 155 GLSHNKLKDLPKEIVNQTKLKEIYLQDNHFENFPQELCALYNLEIIDLEQNRIPVIPDEI 214

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
            SSLT +    ++ N  T  P                                 L  +++
Sbjct: 215 -SSLTKLEKFFIASNVVTVLPDS-------------------------LGSCNKLIVLDV 248

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
            +N L +LP  L     + EL L  N + K+   I     L +L + N  LK L  S   
Sbjct: 249 SNNYLHNLPSTLKELTEIRELGLSGNCMEKVPRLICKWTMLHLLYMKNTCLKTLRRSFKR 308

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           L  +  LDL +N  E  P EI  LK L+ L L  N++  +P  + +L  L  LS+  NN 
Sbjct: 309 LLNVTILDLSQNYFEFFPQEICALKNLELLSLDDNRICQVPPEVVNLVKLKALSLTGNNF 368

Query: 508 QSIPEEIGTLENLHTLYL--NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
              PEE+  +E+L  LYL  +  T L  I   +   +NL+ + L+N  L  +P  +
Sbjct: 369 MIFPEEVLLIESLEQLYLGQDQGTKLTYISENIMKLTNLKELYLENNSLENLPDSL 424



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 162/331 (48%), Gaps = 12/331 (3%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+  +DL ++ I  +P  +  LT LE+ ++  N +  LP  +G    L  L ++ N
Sbjct: 192 CALYNLEIIDLEQNRIPVIPDEISSLTKLEKFFIASNVVTVLPDSLGSCNKLIVLDVSNN 251

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L +LP +L  L ++R L L  N + ++P ++ K T L +LY++   +KT+    + L N
Sbjct: 252 YLHNLPSTLKELTEIRELGLSGNCMEKVPRLICKWTMLHLLYMKNTCLKTLRRSFKRLLN 311

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           +++L +  N     P E+  LKNL  L L  N + ++P E+ N   L  L L  N  +  
Sbjct: 312 VTILDLSQNYFEFFPQEICALKNLELLSLDDNRICQVPPEVVNLVKLKALSLTGNNFMIF 371

Query: 278 PDMLGNLINLTRLRLSYN---RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           P+ +  + +L +L L  +   +L  + E + K  +L E  +E  +L +LPD  L S+ ++
Sbjct: 372 PEEVLLIESLEQLYLGQDQGTKLTYISENIMKLTNLKELYLENNSLENLPDS-LGSIKTL 430

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             +    N+    P     + +++ ++  E+NQ+  +P  +    +NL  +N++ N + +
Sbjct: 431 EMLDCHNNQLKELPDSI-CEISALKTLLLENNQLTALPLKM-DELQNLQVLNLEGNPMEA 488

Query: 395 LP---LDLG---TWVGLTELNLGTNQISKLS 419
            P   L  G    W  L E  L     +KL 
Sbjct: 489 PPPEVLHAGIEEIWKYLKERRLMITMATKLQ 519


>gi|158536496|gb|ABW72742.1| flagellin-sensing 2-like protein [Sinapis alba]
          Length = 680

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 159/485 (32%), Positives = 244/485 (50%), Gaps = 44/485 (9%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKLA-SLPSQIGYVTNLTCLGLAENSLTS-L 162
           LDL+ ++ T  +P  + KLT L +L LY N  + S+PS+I  +T L  L +  N LT  +
Sbjct: 11  LDLASNNFTGQIPAEIGKLTELNQLVLYLNYFSDSVPSKIWELTKLASLDITNNLLTGNV 70

Query: 163 PDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSM 220
           P+S+   + L  + +  N L  E+P  + +L  L++     N+   + P  I  L NL+ 
Sbjct: 71  PESICKTRSLVSVRIGSNNLAGEIPNCLGELVRLEMFVADVNQFSGLIPVSIGTLVNLTA 130

Query: 221 LSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-I 277
           + +  N++  ++P E+G L++L  L L +N LE E+P EIGNC  L+ L+L  N+L   I
Sbjct: 131 IDLGSNQLTGKIPREIGNLRHLQVLGLYNNLLEGEIPAEIGNCRSLIQLELYGNQLTGRI 190

Query: 278 PDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           P  LGNL+ L  LRL  N+L S +P ++ +   L    + G  L       + +L S+  
Sbjct: 191 PTELGNLVQLESLRLYKNKLSSPIPSSMFRLTRLTNLGLSGNQLVGPIPEEIGNLKSLKV 250

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI-DKIP--YGIFSRAKNLSKVNMKDNLLT 393
           +TL  N  T       T   ++ +I    N I  ++P   G+ S  +NLS     DNLLT
Sbjct: 251 LTLHSNNLTGELPKSITNLRNLTAITMGFNFISGELPADLGLLSNLQNLSA---HDNLLT 307

Query: 394 S-LPLDLGTWVGLTELNLGTNQIS------------------------KLSEDIQNLVNL 428
             +P  +    GL  L+L  NQ+S                        ++ +DI N  ++
Sbjct: 308 GPIPSSISNCTGLKVLDLSFNQMSGKIPRGLGRTNLTGISLGPNRFTGEIPDDIFNCSDV 367

Query: 429 EVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQLVS 486
           EVL L+ NNL   L   IG L+KL+ L +  N L  ++P EIG L+EL  L L +N    
Sbjct: 368 EVLNLARNNLTGTLKPLIGKLQKLRILQVFSNSLTGTIPREIGNLRELIILQLHTNHFTG 427

Query: 487 -LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
            +PR I +LT L  L +  N L+  IPEE+  ++ L  L L++N     IP  LA   +L
Sbjct: 428 RIPREISNLTLLQGLELDTNELECPIPEEMFGMKQLSVLELSNNKLSGPIPILLAKLESL 487

Query: 545 QIMSL 549
             + L
Sbjct: 488 TYLGL 492



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 161/340 (47%), Gaps = 63/340 (18%)

Query: 258 IGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRL-ESVPETLSKCVHLNEFNV 315
           I N T L  LDL  N     IP  +G L  L +L L  N   +SVP  + +         
Sbjct: 2   IANLTYLQVLDLASNNFTGQIPAEIGKLTELNQLVLYLNYFSDSVPSKIWE--------- 52

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI-DKIP-- 372
                          LT + ++ ++ N  T        +  S+ S+    N +  +IP  
Sbjct: 53  ---------------LTKLASLDITNNLLTGNVPESICKTRSLVSVRIGSNNLAGEIPNC 97

Query: 373 YGIFSRAKNL-SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEV 430
            G   R +   + VN    L+   P+ +GT V LT ++LG+NQ++ K+  +I NL +L+V
Sbjct: 98  LGELVRLEMFVADVNQFSGLI---PVSIGTLVNLTAIDLGSNQLTGKIPREIGNLRHLQV 154

Query: 431 LVLSNNLLK-KLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQLVS-L 487
           L L NNLL+ ++P+ IGN R L  L+L  N+L   +P E+G L +L+ L L  N+L S +
Sbjct: 155 LGLYNNLLEGEIPAEIGNCRSLIQLELYGNQLTGRIPTELGNLVQLESLRLYKNKLSSPI 214

Query: 488 PRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDN----------TCLNN--- 533
           P ++  LT L+ L +  N L   IPEEIG L++L  L L+ N          T L N   
Sbjct: 215 PSSMFRLTRLTNLGLSGNQLVGPIPEEIGNLKSLKVLTLHSNNLTGELPKSITNLRNLTA 274

Query: 534 -----------IPFELALCSNLQIMSL-DNCPLSQIPSEI 561
                      +P +L L SNLQ +S  DN     IPS I
Sbjct: 275 ITMGFNFISGELPADLGLLSNLQNLSAHDNLLTGPIPSSI 314


>gi|15229457|ref|NP_189066.1| receptor-like protein kinase 2 [Arabidopsis thaliana]
 gi|75335017|sp|Q9LHP4.1|RCH2_ARATH RecName: Full=Receptor-like protein kinase 2; Flags: Precursor
 gi|11994762|dbj|BAB03091.1| receptor protein kinase-like protein [Arabidopsis thaliana]
 gi|332643357|gb|AEE76878.1| receptor-like protein kinase 2 [Arabidopsis thaliana]
          Length = 1141

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 144/459 (31%), Positives = 221/459 (48%), Gaps = 58/459 (12%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS--LPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQL 172
           +P  + KL+ LE + + GNK  S  +PS+IG  +NLT LGLAE S++  LP SL  L++L
Sbjct: 193 IPTELGKLSGLEVIRIGGNKEISGQIPSEIGDCSNLTVLGLAETSVSGNLPSSLGKLKKL 252

Query: 173 RVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
             L +    +  E+P  +   + L  L+L  N +                         +
Sbjct: 253 ETLSIYTTMISGEIPSDLGNCSELVDLFLYENSLSG----------------------SI 290

Query: 232 PPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTR 289
           P E+G+L  L  L L  N L   +P+EIGNC+ L  +DL  N L   IP  +G L  L  
Sbjct: 291 PREIGQLTKLEQLFLWQNSLVGGIPEEIGNCSNLKMIDLSLNLLSGSIPSSIGRLSFLEE 350

Query: 290 LRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
             +S N+   S+P T+S C  L +  ++   +S L    L +LT +       N+     
Sbjct: 351 FMISDNKFSGSIPTTISNCSSLVQLQLDKNQISGLIPSELGTLTKLTLFFAWSNQLEGSI 410

Query: 349 SGGPTQFTSVYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLLTS-LPLDLGTWVGLT 406
             G    T + +++   N +   IP G+F   +NL+K+ +  N L+  +P ++G    L 
Sbjct: 411 PPGLADCTDLQALDLSRNSLTGTIPSGLF-MLRNLTKLLLISNSLSGFIPQEIGNCSSLV 469

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES-LP 465
            L LG N+I+                       ++PS IG+L+K+  LD   N+L   +P
Sbjct: 470 RLRLGFNRITG----------------------EIPSGIGSLKKINFLDFSSNRLHGKVP 507

Query: 466 NEIGFLKELQRLILQSNQL-VSLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTL 523
           +EIG   ELQ + L +N L  SLP  +  L+ L  L V  N     IP  +G L +L+ L
Sbjct: 508 DEIGSCSELQMIDLSNNSLEGSLPNPVSSLSGLQVLDVSANQFSGKIPASLGRLVSLNKL 567

Query: 524 YLNDNTCLNNIPFELALCSNLQIMSLDNCPLS-QIPSEI 561
            L+ N    +IP  L +CS LQ++ L +  LS +IPSE+
Sbjct: 568 ILSKNLFSGSIPTSLGMCSGLQLLDLGSNELSGEIPSEL 606



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 202/411 (49%), Gaps = 65/411 (15%)

Query: 91  IEKEFLRCKEENILNLDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTN 148
           I  +   C E  +++L L ++S++  +P  + +LT LE+L+L+ N L   +P +IG  +N
Sbjct: 266 IPSDLGNCSE--LVDLFLYENSLSGSIPREIGQLTKLEQLFLWQNSLVGGIPEEIGNCSN 323

Query: 149 LTCLGLAENSLT-SLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIK 206
           L  + L+ N L+ S+P S+  L  L    +  NK    +P  +   +SL  L L  N+I 
Sbjct: 324 LKMIDLSLNLLSGSIPSSIGRLSFLEEFMISDNKFSGSIPTTISNCSSLVQLQLDKNQIS 383

Query: 207 TVHP-DIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLEE----------- 253
            + P ++  L+ L++     N++   +PP L +  +L  LDL+ N L             
Sbjct: 384 GLIPSELGTLTKLTLFFAWSNQLEGSIPPGLADCTDLQALDLSRNSLTGTIPSGLFMLRN 443

Query: 254 --------------LPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE 298
                         +P+EIGNC+ LV L L  N +   IP  +G+L  +  L  S NRL 
Sbjct: 444 LTKLLLISNSLSGFIPQEIGNCSSLVRLRLGFNRITGEIPSGIGSLKKINFLDFSSNRLH 503

Query: 299 S-VPETLSKCVHLNEFNVEGCAL-SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFT 356
             VP+ +  C  L   ++   +L  SLP+ + SSL+ +  + +S N+F+           
Sbjct: 504 GKVPDEIGSCSELQMIDLSNNSLEGSLPNPV-SSLSGLQVLDVSANQFSG---------- 552

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQI 415
                        KIP  +  R  +L+K+ +  NL + S+P  LG   GL  L+LG+N++
Sbjct: 553 -------------KIPASL-GRLVSLNKLILSKNLFSGSIPTSLGMCSGLQLLDLGSNEL 598

Query: 416 S-KLSEDIQNLVNLEVLV--LSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           S ++  ++ ++ NLE+ +   SN L  K+PS I +L KL  LDL  N LE 
Sbjct: 599 SGEIPSELGDIENLEIALNLSSNRLTGKIPSKIASLNKLSILDLSHNMLEG 649



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 167/347 (48%), Gaps = 17/347 (4%)

Query: 231 LPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELV-NIPDMLGNLINLT 288
           LP  L   ++L  L ++  +L   LP+ +G+C  L  LDL  N LV +IP  L  L NL 
Sbjct: 97  LPKNLPAFRSLQKLTISGANLTGTLPESLGDCLGLKVLDLSSNGLVGDIPWSLSKLRNLE 156

Query: 289 RLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            L L+ N+L   +P  +SKC  L    +    L+      L  L+ +  I +  NK  + 
Sbjct: 157 TLILNSNQLTGKIPPDISKCSKLKSLILFDNLLTGSIPTELGKLSGLEVIRIGGNKEISG 216

Query: 348 PSGGPTQFTSVYSINF----EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS-LPLDLGTW 402
               P++     ++      E +    +P  +  + K L  +++   +++  +P DLG  
Sbjct: 217 QI--PSEIGDCSNLTVLGLAETSVSGNLPSSL-GKLKKLETLSIYTTMISGEIPSDLGNC 273

Query: 403 VGLTELNLGTNQIS-KLSEDIQNLVNLEVLVL-SNNLLKKLPSSIGNLRKLKCLDLEENK 460
             L +L L  N +S  +  +I  L  LE L L  N+L+  +P  IGN   LK +DL  N 
Sbjct: 274 SELVDLFLYENSLSGSIPREIGQLTKLEQLFLWQNSLVGGIPEEIGNCSNLKMIDLSLNL 333

Query: 461 LE-SLPNEIGFLKELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTL 517
           L  S+P+ IG L  L+  ++  N+   S+P  I + ++L  L + +N +   IP E+GTL
Sbjct: 334 LSGSIPSSIGRLSFLEEFMISDNKFSGSIPTTISNCSSLVQLQLDKNQISGLIPSELGTL 393

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS-QIPSEIVV 563
             L   +   N    +IP  LA C++LQ + L    L+  IPS + +
Sbjct: 394 TKLTLFFAWSNQLEGSIPPGLADCTDLQALDLSRNSLTGTIPSGLFM 440



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 129/270 (47%), Gaps = 30/270 (11%)

Query: 299 SVPETLSKCVHLNEFNVEGCALS-SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
           S+P+ L     L +  + G  L+ +LP+ L   L  +  + LS N          ++  +
Sbjct: 96  SLPKNLPAFRSLQKLTISGANLTGTLPESLGDCL-GLKVLDLSSNGLVGDIPWSLSKLRN 154

Query: 358 VYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQI 415
           + ++    NQ+  KIP  I S+   L  + + DNLLT S+P +LG   GL  + +G N+ 
Sbjct: 155 LETLILNSNQLTGKIPPDI-SKCSKLKSLILFDNLLTGSIPTELGKLSGLEVIRIGGNK- 212

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKEL 474
                                +  ++PS IG+   L  L L E  +   LP+ +G LK+L
Sbjct: 213 --------------------EISGQIPSEIGDCSNLTVLGLAETSVSGNLPSSLGKLKKL 252

Query: 475 QRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTLENLHTLYLNDNTCLN 532
           + L + +  +   +P  +G+ + L  L + EN+L  SIP EIG L  L  L+L  N+ + 
Sbjct: 253 ETLSIYTTMISGEIPSDLGNCSELVDLFLYENSLSGSIPREIGQLTKLEQLFLWQNSLVG 312

Query: 533 NIPFELALCSNLQIMSLD-NCPLSQIPSEI 561
            IP E+  CSNL+++ L  N     IPS I
Sbjct: 313 GIPEEIGNCSNLKMIDLSLNLLSGSIPSSI 342



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 112/215 (52%), Gaps = 10/215 (4%)

Query: 91  IEKEFLRCKEENILNLDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTN 148
           I +E   C   +++ L L  + IT  +P  +  L  +  L    N+L   +P +IG  + 
Sbjct: 458 IPQEIGNCS--SLVRLRLGFNRITGEIPSGIGSLKKINFLDFSSNRLHGKVPDEIGSCSE 515

Query: 149 LTCLGLAENSL-TSLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIK 206
           L  + L+ NSL  SLP+ +++L  L+VLD+  N+   ++P  + +L SL  L L  N   
Sbjct: 516 LQMIDLSNNSLEGSLPNPVSSLSGLQVLDVSANQFSGKIPASLGRLVSLNKLILSKNLFS 575

Query: 207 TVHP-DIQYLSNLSMLSMRDNKIR-ELPPELGELKNL-VTLDLAHNHLE-ELPKEIGNCT 262
              P  +   S L +L +  N++  E+P ELG+++NL + L+L+ N L  ++P +I +  
Sbjct: 576 GSIPTSLGMCSGLQLLDLGSNELSGEIPSELGDIENLEIALNLSSNRLTGKIPSKIASLN 635

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
            L  LDL HN L      L N+ NL  L +SYN  
Sbjct: 636 KLSILDLSHNMLEGDLAPLANIENLVSLNISYNSF 670



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 124/254 (48%), Gaps = 34/254 (13%)

Query: 106 LDLSKSSITH-LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTS-L 162
           LDLS++S+T  +P  +  L +L +L L  N L+  +P +IG  ++L  L L  N +T  +
Sbjct: 423 LDLSRNSLTGTIPSGLFMLRNLTKLLLISNSLSGFIPQEIGNCSSLVRLRLGFNRITGEI 482

Query: 163 PDSLANLQQLRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSM 220
           P  + +L+++  LD   N+L+ ++P  +   + L+++ L  N ++   P+ +  LS L +
Sbjct: 483 PSGIGSLKKINFLDFSSNRLHGKVPDEIGSCSELQMIDLSNNSLEGSLPNPVSSLSGLQV 542

Query: 221 LSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-I 277
           L +  N+   ++P  LG L +L  L L+ N     +P  +G C+ L  LDL  NEL   I
Sbjct: 543 LDVSANQFSGKIPASLGRLVSLNKLILSKNLFSGSIPTSLGMCSGLQLLDLGSNELSGEI 602

Query: 278 PDMLGNLINL-------------------------TRLRLSYNRLESVPETLSKCVHLNE 312
           P  LG++ NL                         + L LS+N LE     L+   +L  
Sbjct: 603 PSELGDIENLEIALNLSSNRLTGKIPSKIASLNKLSILDLSHNMLEGDLAPLANIENLVS 662

Query: 313 FNVEGCALSS-LPD 325
            N+   + S  LPD
Sbjct: 663 LNISYNSFSGYLPD 676



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 3/115 (2%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNL-TCLGLAENSLTS-LPDSLANLQQL 172
           +P S+   + L+ L L  N+L+  +PS++G + NL   L L+ N LT  +P  +A+L +L
Sbjct: 578 IPTSLGMCSGLQLLDLGSNELSGEIPSELGDIENLEIALNLSSNRLTGKIPSKIASLNKL 637

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
            +LDL HN L      +  + +L  L + +N      PD +    LS   +  NK
Sbjct: 638 SILDLSHNMLEGDLAPLANIENLVSLNISYNSFSGYLPDNKLFRQLSPQDLEGNK 692


>gi|195123347|ref|XP_002006169.1| GI18706 [Drosophila mojavensis]
 gi|193911237|gb|EDW10104.1| GI18706 [Drosophila mojavensis]
          Length = 906

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 192/378 (50%), Gaps = 26/378 (6%)

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
           +  P V     +L+ L+L   R++T+ P + Y   L +L +  N +  +P  +G L+ L 
Sbjct: 31  DAFPEVWQHERTLEELHLSNARLQTLPPQLFYCQGLRVLQVNSNNLESIPQAIGSLRQLQ 90

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            LDL  N +  +P+EI  C  L  LDL  N L  +PD + +LI+L  L L+   LE +P 
Sbjct: 91  HLDLNRNLIVNVPEEIKACKHLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPA 150

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
              + V+L    V    L +LP  ++  L ++  + +  N+FT  P     +  S+  + 
Sbjct: 151 NFGRLVNLRILEVRLNNLITLPKSMVR-LVNLQRLDIGGNEFTELPEVV-GELKSLRELW 208

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW-------------------V 403
            + NQI ++   I  + ++L       NLL +LP +L  W                   V
Sbjct: 209 IDFNQIRRVAPNI-GKLRDLQHFEANGNLLDTLPNELSNWRNVEVLSVCSNNLEAFPFSV 267

Query: 404 G----LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G    L      +N +S+L + I  L  LE LVLS+N L +LPS+IG+L KL+ L  ++N
Sbjct: 268 GMLKSLVTFKCESNGLSELPDSISYLEQLEELVLSHNKLMRLPSTIGSLTKLRFLFADDN 327

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L  LP+E+    +L  L + +NQL +LP+ IGHL  L  L+V  N + ++P  + +L N
Sbjct: 328 QLRHLPDELCSCSQLSVLSVANNQLSALPQNIGHLAKLKVLNVVNNYINALPVSMLSLVN 387

Query: 520 LHTLYLNDNTCLNNIPFE 537
           L +L+L+DN     +P +
Sbjct: 388 LTSLWLSDNQSQPLVPLQ 405



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 194/387 (50%), Gaps = 6/387 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           +EE I  LD S + +    P V +    LEEL+L   +L +LP Q+ Y   L  L +  N
Sbjct: 15  REEVIDKLDYSNTPLQDAFPEVWQHERTLEELHLSNARLQTLPPQLFYCQGLRVLQVNSN 74

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           +L S+P ++ +L+QL+ LDL  N +  +P  +     L  L L  N ++ +   I  L +
Sbjct: 75  NLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKACKHLTHLDLSCNSLQRLPDAITSLIS 134

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L + +  +  LP   G L NL  L++  N+L  LPK +     L  LD+  NE   +
Sbjct: 135 LQELLLNETYLEFLPANFGRLVNLRILEVRLNNLITLPKSMVRLVNLQRLDIGGNEFTEL 194

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P+++G L +L  L + +N++  V   + K   L  F   G  L +LP+  LS+  ++  +
Sbjct: 195 PEVVGELKSLRELWIDFNQIRRVAPNIGKLRDLQHFEANGNLLDTLPNE-LSNWRNVEVL 253

Query: 338 TLSRNKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           ++  N   A+P S G     S+ +   E N + ++P  I S  + L ++ +  N L  LP
Sbjct: 254 SVCSNNLEAFPFSVG--MLKSLVTFKCESNGLSELPDSI-SYLEQLEELVLSHNKLMRLP 310

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +G+   L  L    NQ+  L +++ +   L VL ++NN L  LP +IG+L KLK L++
Sbjct: 311 STIGSLTKLRFLFADDNQLRHLPDELCSCSQLSVLSVANNQLSALPQNIGHLAKLKVLNV 370

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQ 483
             N + +LP  +  L  L  L L  NQ
Sbjct: 371 VNNYINALPVSMLSLVNLTSLWLSDNQ 397



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 160/326 (49%), Gaps = 28/326 (8%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           +N+ +E   CK  ++ +LDLS +S+  LP ++  L  L+EL L    L  LP+  G + N
Sbjct: 100 VNVPEEIKACK--HLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPANFGRLVN 157

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L +  N+L +LP S+  L  L+ LD+  N+  ELP VV +L SL+ L++ FN+I+ V
Sbjct: 158 LRILEVRLNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVGELKSLRELWIDFNQIRRV 217

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
            P+I  L +L       N +  LP EL   +N+  L +  N+LE  P  +G    LVT  
Sbjct: 218 APNIGKLRDLQHFEANGNLLDTLPNELSNWRNVEVLSVCSNNLEAFPFSVGMLKSLVTFK 277

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
            + N L  +PD +  L  L  L LS+N+L  +P T+     L     +   L  LPD L 
Sbjct: 278 CESNGLSELPDSISYLEQLEELVLSHNKLMRLPSTIGSLTKLRFLFADDNQLRHLPDELC 337

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           S                          + +  ++  +NQ+  +P  I   AK L  +N+ 
Sbjct: 338 SC-------------------------SQLSVLSVANNQLSALPQNIGHLAK-LKVLNVV 371

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQ 414
           +N + +LP+ + + V LT L L  NQ
Sbjct: 372 NNYINALPVSMLSLVNLTSLWLSDNQ 397



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 72/133 (54%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           ++++      + ++ LP S+  L  LEEL L  NKL  LPS IG +T L  L   +N L 
Sbjct: 271 KSLVTFKCESNGLSELPDSISYLEQLEELVLSHNKLMRLPSTIGSLTKLRFLFADDNQLR 330

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LPD L +  QL VL + +N+L+ LP  +  L  LK+L +  N I  +   +  L NL+ 
Sbjct: 331 HLPDELCSCSQLSVLSVANNQLSALPQNIGHLAKLKVLNVVNNYINALPVSMLSLVNLTS 390

Query: 221 LSMRDNKIRELPP 233
           L + DN+ + L P
Sbjct: 391 LWLSDNQSQPLVP 403



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 77/153 (50%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L +  +++   P SV  L  L       N L+ LP  I Y+  L  L L+ N L  
Sbjct: 249 NVEVLSVCSNNLEAFPFSVGMLKSLVTFKCESNGLSELPDSISYLEQLEELVLSHNKLMR 308

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP ++ +L +LR L    N+L  LP  +   + L +L +  N++  +  +I +L+ L +L
Sbjct: 309 LPSTIGSLTKLRFLFADDNQLRHLPDELCSCSQLSVLSVANNQLSALPQNIGHLAKLKVL 368

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           ++ +N I  LP  +  L NL +L L+ N  + L
Sbjct: 369 NVVNNYINALPVSMLSLVNLTSLWLSDNQSQPL 401


>gi|348678832|gb|EGZ18649.1| hypothetical protein PHYSODRAFT_360673 [Phytophthora sojae]
          Length = 1247

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 142/450 (31%), Positives = 219/450 (48%), Gaps = 49/450 (10%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           LS + +T +P  ++ L HLEEL +  N+L  LPS +   T LT +  + N + +    L 
Sbjct: 306 LSHNCLTRIPSGIQDLIHLEELDVSHNQLTRLPSCLQTTTTLTEIRASHNFIQAFSPKLW 365

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLK----------------ILYLRFNRIKTVHPD 211
            L+++R LDL HN+L ELP V   L  L+                +L L  NR+  V   
Sbjct: 366 KLREIRYLDLSHNRLKELPYVEGDLKLLRETREWQVGVGLLARLEVLLLNDNRLVEVPKS 425

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
           I+  S L++L + +N++  L  E+  L +L  L L HN L  LP+ IGN + L   DL H
Sbjct: 426 IEKCSELTLLDLSNNQLTALRDEIPALASLKRLVLHHNALRSLPEAIGNLSCLEEFDLAH 485

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           N L+ +P+ +G L  L  L L  N+L  +P+       L   N++               
Sbjct: 486 NRLLTLPESIGALHKLEMLLLFSNQLRLLPKEFGALSQLRHLNLD--------------- 530

Query: 332 TSINNITLS--RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
              NN  L   ++ F    S      +S   + FE   +D      F +   +  + ++ 
Sbjct: 531 ---NNPKLINLKDFFGHLSSVSFFSASSCGIVTFE--SLD------FLKDSPVRTLRLRQ 579

Query: 390 NLLTSLPLDLGTWV---GLTELNLGTNQISKLSEDIQ-NLVNLEVLVLSNNLLKKLPSSI 445
           N L   PL +G       L EL L  N +S++   +     +L+ L LSNN L+ LP+ I
Sbjct: 580 NALLEFPLLIGHAAMQDTLQELVLAGNHLSQVPLAVLLYCSHLQHLDLSNNSLRVLPTEI 639

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
            +LR+LK L L  N+L+ LP+E+  L  L+ L    NQL  LP  +G+L+ L  L+V  N
Sbjct: 640 AHLRRLKVLYLSTNELQELPDELTQLPRLRELTCDHNQLEKLPLRVGNLSQLIKLNVSFN 699

Query: 506 NLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
            L+S+P  +  L +L +LY +DN  L+ +P
Sbjct: 700 QLRSLPTSVMELTHLQSLYASDN-LLSGLP 728



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 19/255 (7%)

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           LD+   +   +   + NL  L +L LS+N L  +P  +   +HL E +V    L+ LP  
Sbjct: 281 LDMSGLDAWKLSSRIWNLQFLKKLVLSHNCLTRIPSGIQDLIHLEELDVSHNQLTRLP-S 339

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY------------- 373
            L + T++  I  S N   A+ S    +   +  ++  HN++ ++PY             
Sbjct: 340 CLQTTTTLTEIRASHNFIQAF-SPKLWKLREIRYLDLSHNRLKELPYVEGDLKLLRETRE 398

Query: 374 ---GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
              G+      L  + + DN L  +P  +     LT L+L  NQ++ L ++I  L +L+ 
Sbjct: 399 WQVGV-GLLARLEVLLLNDNRLVEVPKSIEKCSELTLLDLSNNQLTALRDEIPALASLKR 457

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA 490
           LVL +N L+ LP +IGNL  L+  DL  N+L +LP  IG L +L+ L+L SNQL  LP+ 
Sbjct: 458 LVLHHNALRSLPEAIGNLSCLEEFDLAHNRLLTLPESIGALHKLEMLLLFSNQLRLLPKE 517

Query: 491 IGHLTNLSYLSVGEN 505
            G L+ L +L++  N
Sbjct: 518 FGALSQLRHLNLDNN 532



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 87/281 (30%), Positives = 130/281 (46%), Gaps = 38/281 (13%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLA 155
           L C EE     DL+ + +  LP S+  L  LE L L+ N+L  LP + G ++ L  L L 
Sbjct: 475 LSCLEE----FDLAHNRLLTLPESIGALHKLEMLLLFSNQLRLLPKEFGALSQLRHLNLD 530

Query: 156 EN-SLTSLPDSLANLQQ------------------------LRVLDLRHNKLNELPMVVY 190
            N  L +L D   +L                          +R L LR N L E P+++ 
Sbjct: 531 NNPKLINLKDFFGHLSSVSFFSASSCGIVTFESLDFLKDSPVRTLRLRQNALLEFPLLIG 590

Query: 191 KLT---SLKILYLRFNRIKTVHPDIQ-YLSNLSMLSMRDNKIRELPPELGELKNLVTLDL 246
                 +L+ L L  N +  V   +  Y S+L  L + +N +R LP E+  L+ L  L L
Sbjct: 591 HAAMQDTLQELVLAGNHLSQVPLAVLLYCSHLQHLDLSNNSLRVLPTEIAHLRRLKVLYL 650

Query: 247 AHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK 306
           + N L+ELP E+     L  L   HN+L  +P  +GNL  L +L +S+N+L S+P ++ +
Sbjct: 651 STNELQELPDELTQLPRLRELTCDHNQLEKLPLRVGNLSQLIKLNVSFNQLRSLPTSVME 710

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNIT-LSRNKFTA 346
             HL         LS LP     +++ +N     S N FTA
Sbjct: 711 LTHLQSLYASDNLLSGLP----PAISRVNCFCEFSNNPFTA 747



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 170/395 (43%), Gaps = 55/395 (13%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
           SN  +L M      +L   +  L+ L  L L+HN L  +P  I +   L  LD+ HN+L 
Sbjct: 276 SNAQLLDMSGLDAWKLSSRIWNLQFLKKLVLSHNCLTRIPSGIQDLIHLEELDVSHNQLT 335

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP--DGLLSSLTS 333
            +P  L     LT +R S+N +++    L K   +   ++    L  LP  +G L  L  
Sbjct: 336 RLPSCLQTTTTLTEIRASHNFIQAFSPKLWKLREIRYLDLSHNRLKELPYVEGDLKLLRE 395

Query: 334 INNITLS-------------RNKFTAYPSGGPTQFTSVYSINFEHNQI----DKIPYGIF 376
                +               N+    P     + + +  ++  +NQ+    D+IP    
Sbjct: 396 TREWQVGVGLLARLEVLLLNDNRLVEVPKS-IEKCSELTLLDLSNNQLTALRDEIPA--- 451

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
               +L ++ +  N L SLP  +G    L E +L  N++  L E I  L  LE+L+L +N
Sbjct: 452 --LASLKRLVLHHNALRSLPEAIGNLSCLEEFDLAHNRLLTLPESIGALHKLEMLLLFSN 509

Query: 437 LLKKLPSSIGNLRKLKCLDLEEN-KLESLPNEIG----------------------FLKE 473
            L+ LP   G L +L+ L+L+ N KL +L +  G                      FLK+
Sbjct: 510 QLRLLPKEFGALSQLRHLNLDNNPKLINLKDFFGHLSSVSFFSASSCGIVTFESLDFLKD 569

Query: 474 --LQRLILQSNQLVSLPRAIGHLT---NLSYLSVGENNLQSIPEEIGTLENLHTLYLN-D 527
             ++ L L+ N L+  P  IGH      L  L +  N+L  +P  +  L   H  +L+  
Sbjct: 570 SPVRTLRLRQNALLEFPLLIGHAAMQDTLQELVLAGNHLSQVPLAV-LLYCSHLQHLDLS 628

Query: 528 NTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           N  L  +P E+A    L+++ L    L ++P E+ 
Sbjct: 629 NNSLRVLPTEIAHLRRLKVLYLSTNELQELPDELT 663


>gi|417782200|ref|ZP_12429933.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410777793|gb|EKR62438.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 381

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 113/312 (36%), Positives = 171/312 (54%), Gaps = 12/312 (3%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L++ + ++  LP E+ + +NL  LDL+ N L+ LPKEIG    L  L+L  N L+N
Sbjct: 48  DVRVLNLNERQLTVLPKEIEKFQNLKQLDLSDNQLKVLPKEIGQLQNLQVLNLSANNLIN 107

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +  L NL RL LS NRL ++P+ + +   L   +V    L+ LP   +  L ++  
Sbjct: 108 LPKEIDQLQNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHNRLTVLPKE-IGQLQNLKE 166

Query: 337 ITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
           + L  N  T  P   G   +F  +Y      NQ+  +P G+  + +NL ++ +  N LTS
Sbjct: 167 LLLYGNSLTTLPEEIGQLQKFERLY---LHDNQLTTLPQGL-CKLQNLEQIYLHQNRLTS 222

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP ++G    L  L L +N+++ L E+I  L NL  L L  N L  LP  IG L+KL  L
Sbjct: 223 LPQEIGQLGKLWTLYLYSNELTTLPEEIGQLQNLRQLNLKLNNLTTLPKEIGQLQKLDNL 282

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           DL +N+L S+P EIG L+ L+ L L  N LV LP+ IG L NL +L+     ++ IP+ I
Sbjct: 283 DLSDNQLTSIPKEIGQLQNLRWLDLSGNPLVILPKEIGQLKNLYFLA-----MKGIPDLI 337

Query: 515 GTLENLHTLYLN 526
              E +  L  N
Sbjct: 338 PQKEKIRKLVPN 349



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 113/345 (32%), Positives = 178/345 (51%), Gaps = 15/345 (4%)

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +L ++  N   +RVL+L   +L  LP  + K  +LK L L  N++K +  +I  L NL +
Sbjct: 38  TLTEAFKNPMDVRVLNLNERQLTVLPKEIEKFQNLKQLDLSDNQLKVLPKEIGQLQNLQV 97

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  N +  LP E+ +L+NL  L+L+ N L  LP+EIG    L  L + HN L  +P  
Sbjct: 98  LNLSANNLINLPKEIDQLQNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHNRLTVLPKE 157

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  N L ++PE + +        +    L++LP G L  L ++  I L 
Sbjct: 158 IGQLQNLKELLLYGNSLTTLPEEIGQLQKFERLYLHDNQLTTLPQG-LCKLQNLEQIYLH 216

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           +N+ T+ P     Q   ++++    N++  +P  I  + +NL ++N+K N LT+LP ++G
Sbjct: 217 QNRLTSLPQ-EIGQLGKLWTLYLYSNELTTLPEEI-GQLQNLRQLNLKLNNLTTLPKEIG 274

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL---- 456
               L  L+L  NQ++ + ++I  L NL  L LS N L  LP  IG L+ L  L +    
Sbjct: 275 QLQKLDNLDLSDNQLTSIPKEIGQLQNLRWLDLSGNPLVILPKEIGQLKNLYFLAMKGIP 334

Query: 457 ----EENKLESL-PNEI---GFLKELQRLILQSNQLVSLPRAIGH 493
               ++ K+  L PN I   G   +L+R   QS Q  S  R   H
Sbjct: 335 DLIPQKEKIRKLVPNAIMDFGEGPKLKRRTTQSRQRKSQNRRENH 379



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 156/311 (50%), Gaps = 27/311 (8%)

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            L+L    L  LPKEI     L  LDL  N+L  +P  +G L NL  L LS N L ++P+
Sbjct: 51  VLNLNERQLTVLPKEIEKFQNLKQLDLSDNQLKVLPKEIGQLQNLQVLNLSANNLINLPK 110

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
            + +  +L   N+ G  L++LP  +                          Q   +  ++
Sbjct: 111 EIDQLQNLKRLNLSGNRLTTLPQEI-------------------------GQLKKLEWLH 145

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             HN++  +P  I  + +NL ++ +  N LT+LP ++G       L L  NQ++ L + +
Sbjct: 146 VSHNRLTVLPKEI-GQLQNLKELLLYGNSLTTLPEEIGQLQKFERLYLHDNQLTTLPQGL 204

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NLE + L  N L  LP  IG L KL  L L  N+L +LP EIG L+ L++L L+ N
Sbjct: 205 CKLQNLEQIYLHQNRLTSLPQEIGQLGKLWTLYLYSNELTTLPEEIGQLQNLRQLNLKLN 264

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
            L +LP+ IG L  L  L + +N L SIP+EIG L+NL  L L+ N  +  +P E+    
Sbjct: 265 NLTTLPKEIGQLQKLDNLDLSDNQLTSIPKEIGQLQNLRWLDLSGNPLV-ILPKEIGQLK 323

Query: 543 NLQIMSLDNCP 553
           NL  +++   P
Sbjct: 324 NLYFLAMKGIP 334



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/225 (38%), Positives = 129/225 (57%), Gaps = 5/225 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+LS + +T LP  + +L  LE L++  N+L  LP +IG + NL  L L  NSLT
Sbjct: 116 QNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHNRLTVLPKEIGQLQNLKELLLYGNSLT 175

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP+ +  LQ+   L L  N+L  LP  + KL +L+ +YL  NR+ ++  +I  L  L  
Sbjct: 176 TLPEEIGQLQKFERLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLTSLPQEIGQLGKLWT 235

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G+L+NL  L+L  N+L  LPKEIG    L  LDL  N+L +IP  
Sbjct: 236 LYLYSNELTTLPEEIGQLQNLRQLNLKLNNLTTLPKEIGQLQKLDNLDLSDNQLTSIPKE 295

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
           +G L NL  L LS N L  +P+ + +       N+   A+  +PD
Sbjct: 296 IGQLQNLRWLDLSGNPLVILPKEIGQLK-----NLYFLAMKGIPD 335



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 135/251 (53%), Gaps = 1/251 (0%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  LDLS + +  LP  + +L +L+ L L  N L +LP +I  + NL  L L+ N 
Sbjct: 68  KFQNLKQLDLSDNQLKVLPKEIGQLQNLQVLNLSANNLINLPKEIDQLQNLKRLNLSGNR 127

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP  +  L++L  L + HN+L  LP  + +L +LK L L  N + T+  +I  L   
Sbjct: 128 LTTLPQEIGQLKKLEWLHVSHNRLTVLPKEIGQLQNLKELLLYGNSLTTLPEEIGQLQKF 187

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L + DN++  LP  L +L+NL  + L  N L  LP+EIG    L TL L  NEL  +P
Sbjct: 188 ERLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLTSLPQEIGQLGKLWTLYLYSNELTTLP 247

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           + +G L NL +L L  N L ++P+ + +   L+  ++    L+S+P   +  L ++  + 
Sbjct: 248 EEIGQLQNLRQLNLKLNNLTTLPKEIGQLQKLDNLDLSDNQLTSIPKE-IGQLQNLRWLD 306

Query: 339 LSRNKFTAYPS 349
           LS N     P 
Sbjct: 307 LSGNPLVILPK 317



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 151/283 (53%), Gaps = 3/283 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+L++  +T LP  +EK  +L++L L  N+L  LP +IG + NL  L L+ N+L +LP  
Sbjct: 52  LNLNERQLTVLPKEIEKFQNLKQLDLSDNQLKVLPKEIGQLQNLQVLNLSANNLINLPKE 111

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ L+L  N+L  LP  + +L  L+ L++  NR+  +  +I  L NL  L +  
Sbjct: 112 IDQLQNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHNRLTVLPKEIGQLQNLKELLLYG 171

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N +  LP E+G+L+    L L  N L  LP+ +     L  + L  N L ++P  +G L 
Sbjct: 172 NSLTTLPEEIGQLQKFERLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLTSLPQEIGQLG 231

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L  N L ++PE + +  +L + N++   L++LP   +  L  ++N+ LS N+ T
Sbjct: 232 KLWTLYLYSNELTTLPEEIGQLQNLRQLNLKLNNLTTLPKE-IGQLQKLDNLDLSDNQLT 290

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           + P     Q  ++  ++   N +  +P  I  + KNL  + MK
Sbjct: 291 SIPK-EIGQLQNLRWLDLSGNPLVILPKEI-GQLKNLYFLAMK 331



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 133/246 (54%), Gaps = 4/246 (1%)

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
           EG    +L +   + +  +  + L+  + T  P     +F ++  ++   NQ+  +P  I
Sbjct: 32  EGQTYRTLTEAFKNPM-DVRVLNLNERQLTVLPKE-IEKFQNLKQLDLSDNQLKVLPKEI 89

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             + +NL  +N+  N L +LP ++     L  LNL  N+++ L ++I  L  LE L +S+
Sbjct: 90  -GQLQNLQVLNLSANNLINLPKEIDQLQNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSH 148

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N L  LP  IG L+ LK L L  N L +LP EIG L++ +RL L  NQL +LP+ +  L 
Sbjct: 149 NRLTVLPKEIGQLQNLKELLLYGNSLTTLPEEIGQLQKFERLYLHDNQLTTLPQGLCKLQ 208

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           NL  + + +N L S+P+EIG L  L TLYL  N  L  +P E+    NL+ ++L    L+
Sbjct: 209 NLEQIYLHQNRLTSLPQEIGQLGKLWTLYLYSNE-LTTLPEEIGQLQNLRQLNLKLNNLT 267

Query: 556 QIPSEI 561
            +P EI
Sbjct: 268 TLPKEI 273


>gi|355559885|gb|EHH16613.1| hypothetical protein EGK_11920 [Macaca mulatta]
 gi|355746906|gb|EHH51520.1| hypothetical protein EGM_10909 [Macaca fascicularis]
          Length = 560

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 145/497 (29%), Positives = 230/497 (46%), Gaps = 55/497 (11%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +D S  S+T +P  +   T LEE++L  N++  +P +I  + N+  L L +N+L SL  +
Sbjct: 30  IDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPA 89

Query: 166 LANLQQLRVLDLRHN------------------------KLNELPMVVYK-LTSLKILYL 200
           L  L  L  LDL +N                         L E+P+V+ K L  L++L L
Sbjct: 90  LGLLSSLERLDLSYNPIFSSSLLVVSFLHALRELRLYQTDLKEIPVVICKNLHHLELLGL 149

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
             N +K +  +I   + L  + ++ N+    P EL  L NL  +DL  N +  +P+EIG+
Sbjct: 150 TGNHLKCLPKEIVNQTKLREIYLKRNQFEAFPQELCVLYNLEIIDLDENKIGAIPEEIGH 209

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
            T L    +  N L  +P  L +   L+ L LS+N L S+P++L++   + E  + G  L
Sbjct: 210 LTGLQKFYVASNNLPVLPASLCHCSQLSVLDLSHNLLHSIPKSLTELRKMTEIGLSGNRL 269

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
             +P  L+   TS++ + L  N       G      ++  ++   N +D  P  I +  K
Sbjct: 270 EKVP-YLICRWTSLHLLYLG-NTGLHRLRGSFRHLVNLRCLDLSQNHLDHCPLQICA-LK 326

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           NL  + + DN +  LP +LG+   L  L L  N+     E++ +L +LE L +  +   K
Sbjct: 327 NLEVLGLDDNKIGQLPSELGSLSKLKILGLTGNEFLSFPEEVLSLASLEKLYIGQDQGFK 386

Query: 441 L---PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L   P  I  L+ LK L +E N LE LP  +G +  L+ L  + N L  LP AI     L
Sbjct: 387 LTYVPEHIRKLQSLKELYIENNHLEYLPVSLGSMPNLEVLDCRHNLLKQLPDAICQAQAL 446

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
             L + +N L  +PE + +L NL  L L DN                        P+ + 
Sbjct: 447 KELLLEDNLLTHLPENLDSLVNLKVLTLMDN------------------------PMEEP 482

Query: 558 PSEIVVGGPSLIIRYLK 574
           P E+   G  +I +YLK
Sbjct: 483 PKEVCAEGNEVIWKYLK 499



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 162/319 (50%), Gaps = 29/319 (9%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+  +DL ++ I  +P  +  LT L++ Y+  N L  LP+ + + + L+ L L+ N
Sbjct: 185 CVLYNLEIIDLDENKIGAIPEEIGHLTGLQKFYVASNNLPVLPASLCHCSQLSVLDLSHN 244

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L S+P SL  L+++  + L  N+L ++P ++ + TSL +LYL    +  +    ++L N
Sbjct: 245 LLHSIPKSLTELRKMTEIGLSGNRLEKVPYLICRWTSLHLLYLGNTGLHRLRGSFRHLVN 304

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N +   P ++  LKNL  L L  N + +LP E+G+ + L  L L  NE ++ 
Sbjct: 305 LRCLDLSQNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLSKLKILGLTGNEFLSF 364

Query: 278 PDMLGNLINLTRLRLSYN---RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           P+ + +L +L +L +  +   +L  VPE + K   L E  +E   L  LP     SL S+
Sbjct: 365 PEEVLSLASLEKLYIGQDQGFKLTYVPEHIRKLQSLKELYIENNHLEYLP----VSLGSM 420

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            N+ +                     ++  HN + ++P  I  +A+ L ++ ++DNLLT 
Sbjct: 421 PNLEV---------------------LDCRHNLLKQLPDAI-CQAQALKELLLEDNLLTH 458

Query: 395 LPLDLGTWVGLTELNLGTN 413
           LP +L + V L  L L  N
Sbjct: 459 LPENLDSLVNLKVLTLMDN 477


>gi|312378308|gb|EFR24924.1| hypothetical protein AND_10185 [Anopheles darlingi]
          Length = 657

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 179/364 (49%), Gaps = 50/364 (13%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N++ LD+S++ I  +P  +  L  L+      N +  LP+    + NLT LGL + SLTS
Sbjct: 111 NLVELDVSRNEIGDIPEDIRHLRSLQIADFSSNPIPRLPAGFSQLRNLTVLGLNDMSLTS 170

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP     L +L  L+LR N L  LP  + +LT L+ L L  N I  +   + YL  L  L
Sbjct: 171 LPQDFGCLSKLVSLELRENLLKNLPESISQLTKLERLDLGDNEIDELPSHLGYLPALQEL 230

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N+++ LPPE+G LK LV LD++ N LEELP+EIG    L  L L  N L  +P  +
Sbjct: 231 WLDHNQLQRLPPEIGLLKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPGGV 290

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L NL+ L+L  NRL ++ +T+  CV++ E  +    L+ LP   + ++  +NN+ + R
Sbjct: 291 ARLTNLSILKLDQNRLHTLHDTIGCCVNMQELILTENFLAELPAS-IGNMVLLNNLNVDR 349

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N   A PS                              + L  +++++N LT LP +LG 
Sbjct: 350 NALVAVPSA-------------------------LGHCRKLGVLSLRENKLTRLPSELG- 383

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
                                 +   L VL +S NLL+ LP ++ NL +LK + L EN+ 
Sbjct: 384 ----------------------HCSELHVLDVSGNLLQHLPYALVNL-QLKAVWLSENQS 420

Query: 462 ESLP 465
           + +P
Sbjct: 421 QPVP 424



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 120/390 (30%), Positives = 182/390 (46%), Gaps = 50/390 (12%)

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
           +L  L +L L  N +  +PS I    NL  L ++ N +  +P+ + +L+ L++ D   N 
Sbjct: 85  RLYRLRKLGLSDNDILKIPSDIQNFVNLVELDVSRNEIGDIPEDIRHLRSLQIADFSSNP 144

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           +  LP    +L +L +L L    + ++  D   LS L  L +R+N ++ LP  + +L  L
Sbjct: 145 IPRLPAGFSQLRNLTVLGLNDMSLTSLPQDFGCLSKLVSLELRENLLKNLPESISQLTKL 204

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
             LDL  N ++ELP  +G    L  L L HN+L  +P  +G L  L  L +S NRLE +P
Sbjct: 205 ERLDLGDNEIDELPSHLGYLPALQELWLDHNQLQRLPPEIGLLKKLVCLDVSENRLEELP 264

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
           E +                     G L  LT ++   LS+N     P G           
Sbjct: 265 EEI---------------------GGLECLTDLH---LSQNLLETLPGG----------- 289

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
                          +R  NLS + +  N L +L   +G  V + EL L  N +++L   
Sbjct: 290 --------------VARLTNLSILKLDQNRLHTLHDTIGCCVNMQELILTENFLAELPAS 335

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           I N+V L  L +  N L  +PS++G+ RKL  L L ENKL  LP+E+G   EL  L +  
Sbjct: 336 IGNMVLLNNLNVDRNALVAVPSALGHCRKLGVLSLRENKLTRLPSELGHCSELHVLDVSG 395

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           N L  LP A+ +L  L  + + EN  Q +P
Sbjct: 396 NLLQHLPYALVNL-QLKAVWLSENQSQPVP 424



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 210/439 (47%), Gaps = 33/439 (7%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLP-SQIGYVTNLTCL 152
           F  C  + I  +D   SS+ ++P  + + ++ LEEL L  N +  LP S+  ++  L   
Sbjct: 8   FKGCNRQ-IEYVDNRHSSLPNVPEEIFRYSNSLEELLLDANHIRDLPKSRSEFLPGLLQF 66

Query: 153 GLAENS---LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
           G A       TS       L +LR L L  N + ++P  +    +L  L +  N I  + 
Sbjct: 67  GFAATGGSRRTSRCAGFFRLYRLRKLGLSDNDILKIPSDIQNFVNLVELDVSRNEIGDIP 126

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
            DI++L +L +     N I  LP    +L+NL  L L    L  LP++ G  + LV+L+L
Sbjct: 127 EDIRHLRSLQIADFSSNPIPRLPAGFSQLRNLTVLGLNDMSLTSLPQDFGCLSKLVSLEL 186

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
           + N L N+                       PE++S+   L   ++    +  LP   L 
Sbjct: 187 RENLLKNL-----------------------PESISQLTKLERLDLGDNEIDELPSH-LG 222

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
            L ++  + L  N+    P         +  ++   N+++++P  I    + L+ +++  
Sbjct: 223 YLPALQELWLDHNQLQRLPP-EIGLLKKLVCLDVSENRLEELPEEI-GGLECLTDLHLSQ 280

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
           NLL +LP  +     L+ L L  N++  L + I   VN++ L+L+ N L +LP+SIGN+ 
Sbjct: 281 NLLETLPGGVARLTNLSILKLDQNRLHTLHDTIGCCVNMQELILTENFLAELPASIGNMV 340

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            L  L+++ N L ++P+ +G  ++L  L L+ N+L  LP  +GH + L  L V  N LQ 
Sbjct: 341 LLNNLNVDRNALVAVPSALGHCRKLGVLSLRENKLTRLPSELGHCSELHVLDVSGNLLQH 400

Query: 510 IPEEIGTLENLHTLYLNDN 528
           +P  +  L+ L  ++L++N
Sbjct: 401 LPYALVNLQ-LKAVWLSEN 418



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 193/408 (47%), Gaps = 35/408 (8%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPD--------IQY------ 214
           +Q+  +D RH+ L  +P  +++ + SL+ L L  N I+ +           +Q+      
Sbjct: 13  RQIEYVDNRHSSLPNVPEEIFRYSNSLEELLLDANHIRDLPKSRSEFLPGLLQFGFAATG 72

Query: 215 -------------LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
                        L  L  L + DN I ++P ++    NLV LD++ N + ++P++I + 
Sbjct: 73  GSRRTSRCAGFFRLYRLRKLGLSDNDILKIPSDIQNFVNLVELDVSRNEIGDIPEDIRHL 132

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L   D   N +  +P     L NLT L L+   L S+P+       L    +    L 
Sbjct: 133 RSLQIADFSSNPIPRLPAGFSQLRNLTVLGLNDMSLTSLPQDFGCLSKLVSLELRENLLK 192

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
           +LP+ + S LT +  + L  N+    PS       ++  +  +HNQ+ ++P  I    K 
Sbjct: 193 NLPESI-SQLTKLERLDLGDNEIDELPSH-LGYLPALQELWLDHNQLQRLPPEI-GLLKK 249

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           L  +++ +N L  LP ++G    LT+L+L  N +  L   +  L NL +L L  N L  L
Sbjct: 250 LVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPGGVARLTNLSILKLDQNRLHTL 309

Query: 442 PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLS 501
             +IG    ++ L L EN L  LP  IG +  L  L +  N LV++P A+GH   L  LS
Sbjct: 310 HDTIGCCVNMQELILTENFLAELPASIGNMVLLNNLNVDRNALVAVPSALGHCRKLGVLS 369

Query: 502 VGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
           + EN L  +P E+G    LH L ++ N  L ++P+ L    NLQ+ ++
Sbjct: 370 LRENKLTRLPSELGHCSELHVLDVSGN-LLQHLPYALV---NLQLKAV 413



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 133/250 (53%), Gaps = 2/250 (0%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           +++L+L ++ + +LP S+ +LT LE L L  N++  LPS +GY+  L  L L  N L  L
Sbjct: 181 LVSLELRENLLKNLPESISQLTKLERLDLGDNEIDELPSHLGYLPALQELWLDHNQLQRL 240

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P  +  L++L  LD+  N+L ELP  +  L  L  L+L  N ++T+   +  L+NLS+L 
Sbjct: 241 PPEIGLLKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPGGVARLTNLSILK 300

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++  L   +G   N+  L L  N L ELP  IGN  +L  L++  N LV +P  LG
Sbjct: 301 LDQNRLHTLHDTIGCCVNMQELILTENFLAELPASIGNMVLLNNLNVDRNALVAVPSALG 360

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
           +   L  L L  N+L  +P  L  C  L+  +V G  L  LP  L++    +  + LS N
Sbjct: 361 HCRKLGVLSLRENKLTRLPSELGHCSELHVLDVSGNLLQHLPYALVN--LQLKAVWLSEN 418

Query: 343 KFTAYPSGGP 352
           +    P+  P
Sbjct: 419 QSQPVPTFQP 428



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 104/190 (54%), Gaps = 3/190 (1%)

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
           F R   L K+ + DN +  +P D+  +V L EL++  N+I  + EDI++L +L++   S+
Sbjct: 83  FFRLYRLRKLGLSDNDILKIPSDIQNFVNLVELDVSRNEIGDIPEDIRHLRSLQIADFSS 142

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N + +LP+    LR L  L L +  L SLP + G L +L  L L+ N L +LP +I  LT
Sbjct: 143 NPIPRLPAGFSQLRNLTVLGLNDMSLTSLPQDFGCLSKLVSLELRENLLKNLPESISQLT 202

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            L  L +G+N +  +P  +G L  L  L+L+ N  L  +P E+ L   L  + +    L 
Sbjct: 203 KLERLDLGDNEIDELPSHLGYLPALQELWLDHNQ-LQRLPPEIGLLKKLVCLDVSENRLE 261

Query: 556 QIPSEIVVGG 565
           ++P EI  GG
Sbjct: 262 ELPEEI--GG 269


>gi|427737941|ref|YP_007057485.1| hypothetical protein Riv7116_4517 [Rivularia sp. PCC 7116]
 gi|427372982|gb|AFY56938.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 868

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 103/283 (36%), Positives = 163/283 (57%), Gaps = 5/283 (1%)

Query: 92  EKEFLRCKE----ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVT 147
           E+E L+  E    E    LDLS + +T LPP + +LT+L+ L+L  N+L+SLP + G +T
Sbjct: 3   EEELLQVIEQAAAEGWTELDLSGNELTALPPEIGQLTNLQYLHLSYNQLSSLPEEFGQLT 62

Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT 207
           NL  L L EN L++LP  +  L++L+ L LR N+L+ LP  + +LT+L+ LYL  N++ T
Sbjct: 63  NLQFLYLLENQLSTLPAEIGQLRKLQCLYLRRNQLSILPEEIGQLTNLQSLYLNENQLST 122

Query: 208 VHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
           +  +   L  L    +R N++  LP E+G+L NL +L L  N L  LP EIG  + L  L
Sbjct: 123 LPAEFGQLRKLQCFYLRRNQLSSLPEEIGQLTNLQSLYLNENQLSTLPPEIGQLSNLQYL 182

Query: 268 DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
            L +N+L ++P  +G L NL  L LSYN+L S+PE + +  +L    +    LSSLP  +
Sbjct: 183 HLSYNQLSSLPPEIGQLSNLQYLHLSYNQLSSLPEEIGQLTNLQSLYLRYNQLSSLPPEI 242

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK 370
               + +  +TL  N   + P+    + + V  +NF   ++++
Sbjct: 243 GRLHSHLTELTLDGNPLESLPAEIRGKISQVI-LNFYKQKLEQ 284



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/185 (44%), Positives = 109/185 (58%), Gaps = 1/185 (0%)

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
           + A+  +++++  N LT+LP ++G    L  L+L  NQ+S L E+   L NL+ L L  N
Sbjct: 13  AAAEGWTELDLSGNELTALPPEIGQLTNLQYLHLSYNQLSSLPEEFGQLTNLQFLYLLEN 72

Query: 437 LLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
            L  LP+ IG LRKL+CL L  N+L  LP EIG L  LQ L L  NQL +LP   G L  
Sbjct: 73  QLSTLPAEIGQLRKLQCLYLRRNQLSILPEEIGQLTNLQSLYLNENQLSTLPAEFGQLRK 132

Query: 497 LSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ 556
           L    +  N L S+PEEIG L NL +LYLN+N  L+ +P E+   SNLQ + L    LS 
Sbjct: 133 LQCFYLRRNQLSSLPEEIGQLTNLQSLYLNENQ-LSTLPPEIGQLSNLQYLHLSYNQLSS 191

Query: 557 IPSEI 561
           +P EI
Sbjct: 192 LPPEI 196



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/264 (37%), Positives = 143/264 (54%), Gaps = 27/264 (10%)

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + LS N+ TA P     Q T++  ++  +NQ+  +P   F +  NL  + + +N L++LP
Sbjct: 21  LDLSGNELTALPPE-IGQLTNLQYLHLSYNQLSSLPEE-FGQLTNLQFLYLLENQLSTLP 78

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  L L  NQ+S L E+I  L NL+ L L+ N L  LP+  G LRKL+C  L
Sbjct: 79  AEIGQLRKLQCLYLRRNQLSILPEEIGQLTNLQSLYLNENQLSTLPAEFGQLRKLQCFYL 138

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL------------SVGE 504
             N+L SLP EIG L  LQ L L  NQL +LP  IG L+NL YL             +G+
Sbjct: 139 RRNQLSSLPEEIGQLTNLQSLYLNENQLSTLPPEIGQLSNLQYLHLSYNQLSSLPPEIGQ 198

Query: 505 -----------NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA-LCSNLQIMSLDNC 552
                      N L S+PEEIG L NL +LYL  N  L+++P E+  L S+L  ++LD  
Sbjct: 199 LSNLQYLHLSYNQLSSLPEEIGQLTNLQSLYLRYNQ-LSSLPPEIGRLHSHLTELTLDGN 257

Query: 553 PLSQIPSEIVVGGPSLIIRYLKMQ 576
           PL  +P+EI      +I+ + K +
Sbjct: 258 PLESLPAEIRGKISQVILNFYKQK 281



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 145/295 (49%), Gaps = 27/295 (9%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           LDL  N+L  LP  + +LT+L+ L+L +N++ ++  +   L+NL  L + +N++  LP E
Sbjct: 21  LDLSGNELTALPPEIGQLTNLQYLHLSYNQLSSLPEEFGQLTNLQFLYLLENQLSTLPAE 80

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
           +G+L+ L  L L  N L  LP+EIG  T L +L L  N+L  +P   G L  L    L  
Sbjct: 81  IGQLRKLQCLYLRRNQLSILPEEIGQLTNLQSLYLNENQLSTLPAEFGQLRKLQCFYLRR 140

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
           N+L S+PE + +  +L    +    LS+LP                       P  G  Q
Sbjct: 141 NQLSSLPEEIGQLTNLQSLYLNENQLSTLP-----------------------PEIG--Q 175

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
            +++  ++  +NQ+  +P  I  +  NL  +++  N L+SLP ++G    L  L L  NQ
Sbjct: 176 LSNLQYLHLSYNQLSSLPPEI-GQLSNLQYLHLSYNQLSSLPEEIGQLTNLQSLYLRYNQ 234

Query: 415 ISKLSEDIQNL-VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           +S L  +I  L  +L  L L  N L+ LP+ I        L+  + KLE   N +
Sbjct: 235 LSSLPPEIGRLHSHLTELTLDGNPLESLPAEIRGKISQVILNFYKQKLEQTINRL 289



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 98/159 (61%), Gaps = 1/159 (0%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L ++ ++ LP  + +LT+L+ LYL  N+L++LP +IG ++NL  L L+ N L+SLP  + 
Sbjct: 138 LRRNQLSSLPEEIGQLTNLQSLYLNENQLSTLPPEIGQLSNLQYLHLSYNQLSSLPPEIG 197

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYL-SNLSMLSMRDN 226
            L  L+ L L +N+L+ LP  + +LT+L+ LYLR+N++ ++ P+I  L S+L+ L++  N
Sbjct: 198 QLSNLQYLHLSYNQLSSLPEEIGQLTNLQSLYLRYNQLSSLPPEIGRLHSHLTELTLDGN 257

Query: 227 KIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
            +  LP E+    + V L+     LE+    +    +L+
Sbjct: 258 PLESLPAEIRGKISQVILNFYKQKLEQTINRLYEAKLLI 296


>gi|195334517|ref|XP_002033924.1| GM21584 [Drosophila sechellia]
 gi|194125894|gb|EDW47937.1| GM21584 [Drosophila sechellia]
          Length = 903

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 197/386 (51%), Gaps = 26/386 (6%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           LD  +  L + P V     +L+ LYL   R++ + P + Y   L +L +  N +  +P  
Sbjct: 76  LDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLETIPQA 135

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
           +G L++L  LDL  N +  +P+EI +C  L  LDL  N L  +PD + +LI+L  L L+ 
Sbjct: 136 IGSLRHLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELLLNE 195

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
             LE +P    + V+L    +    L +LP  ++  L ++  + +  N+FT  P     +
Sbjct: 196 TYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVR-LINLQRLDIGGNEFTELPEVV-GE 253

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW------------ 402
             S+  +  + NQI ++   I  + ++L       NLL +LP +L  W            
Sbjct: 254 LKSLRELWIDFNQIRRVSANI-GKLRDLQHFEANGNLLDTLPSELSNWRNVEVLSICSNS 312

Query: 403 -------VG----LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
                  VG    L      +N +++L + I  L  LE LVLS+N L +LPS+IG LR L
Sbjct: 313 LEAFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSL 372

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           + L  ++N+L  LP+E+   ++L  L + +NQL +LP+ IG+L+ +  L+V  N + ++P
Sbjct: 373 RFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVVNNYINALP 432

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFE 537
             +  L NL +++L+DN     +P +
Sbjct: 433 VSMLNLVNLTSMWLSDNQSQPLVPLQ 458



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 192/386 (49%), Gaps = 5/386 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           +EE I  LD S + +T  P   +    LEELYL   +L +LP Q+ Y   L  L +  N+
Sbjct: 69  REEVIDKLDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNN 128

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L ++P ++ +L+ L+ LDL  N +  +P  +     L  L L  N ++ +   I  L +L
Sbjct: 129 LETIPQAIGSLRHLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISL 188

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L + +  +  LP   G L NL  L+L  N+L  LPK +     L  LD+  NE   +P
Sbjct: 189 QELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELP 248

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           +++G L +L  L + +N++  V   + K   L  F   G  L +LP   LS+  ++  ++
Sbjct: 249 EVVGELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPSE-LSNWRNVEVLS 307

Query: 339 LSRNKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
           +  N   A+P S G     S+ +   E N + ++P  I S  + L ++ +  N L  LP 
Sbjct: 308 ICSNSLEAFPFSVG--MLKSLVTFKCESNGLTELPDSI-SYLEQLEELVLSHNKLIRLPS 364

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
            +G    L  L    NQ+ +L +++ +   L VL ++NN L  LP +IGNL K+K L++ 
Sbjct: 365 TIGMLRSLRFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVV 424

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQ 483
            N + +LP  +  L  L  + L  NQ
Sbjct: 425 NNYINALPVSMLNLVNLTSMWLSDNQ 450



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 159/329 (48%), Gaps = 34/329 (10%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           +N+ +E   CK  ++ +LDLS +S+  LP ++  L  L+EL L    L  LP+  G + N
Sbjct: 153 VNVPEEIKSCK--HLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPANFGRLVN 210

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L L  N+L +LP S+  L  L+ LD+  N+  ELP VV +L SL+ L++ FN+I+ V
Sbjct: 211 LRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELPEVVGELKSLRELWIDFNQIRRV 270

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
             +I  L +L       N +  LP EL   +N+  L +  N LE  P  +G    LVT  
Sbjct: 271 SANIGKLRDLQHFEANGNLLDTLPSELSNWRNVEVLSICSNSLEAFPFSVGMLKSLVTFK 330

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
            + N L  +PD +  L  L  L LS+N+L  +P T+     L     +   L  LPD L 
Sbjct: 331 CESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPDELC 390

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV--- 385
           S                        Q  SV S+   +NQ+  +P  I     NLSK+   
Sbjct: 391 S-----------------------CQQLSVLSV--ANNQLSALPQNI----GNLSKMKVL 421

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
           N+ +N + +LP+ +   V LT + L  NQ
Sbjct: 422 NVVNNYINALPVSMLNLVNLTSMWLSDNQ 450



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 74/133 (55%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           ++++      + +T LP S+  L  LEEL L  NKL  LPS IG + +L  L   +N L 
Sbjct: 324 KSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLR 383

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LPD L + QQL VL + +N+L+ LP  +  L+ +K+L +  N I  +   +  L NL+ 
Sbjct: 384 QLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVNLTS 443

Query: 221 LSMRDNKIRELPP 233
           + + DN+ + L P
Sbjct: 444 MWLSDNQSQPLVP 456



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 1/158 (0%)

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           + +L+     ++   E  Q+   LE L LS   L+ LP  +   + L+ L +  N LE++
Sbjct: 73  IDKLDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLETI 132

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P  IG L+ LQ L L  N +V++P  I    +L++L +  N+LQ +P+ I +L +L  L 
Sbjct: 133 PQAIGSLRHLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELL 192

Query: 525 LNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           LN+ T L  +P       NL+I+ L    L  +P  +V
Sbjct: 193 LNE-TYLEFLPANFGRLVNLRILELRLNNLMTLPKSMV 229



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 74/153 (48%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L +  +S+   P SV  L  L       N L  LP  I Y+  L  L L+ N L  
Sbjct: 302 NVEVLSICSNSLEAFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIR 361

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP ++  L+ LR L    N+L +LP  +     L +L +  N++  +  +I  LS + +L
Sbjct: 362 LPSTIGMLRSLRFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVL 421

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           ++ +N I  LP  +  L NL ++ L+ N  + L
Sbjct: 422 NVVNNYINALPVSMLNLVNLTSMWLSDNQSQPL 454


>gi|1184077|gb|AAC15780.1| Cf-2.2 [Solanum pimpinellifolium]
 gi|60327194|gb|AAX19020.1| Cf-2.2 [Solanum pimpinellifolium]
          Length = 1112

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 176/574 (30%), Positives = 276/574 (48%), Gaps = 90/574 (15%)

Query: 98  CKEENILNLDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLA 155
           C   ++  LDLS++++   +P S+  L +L  L+LYGN+L  S+P +IGY+ +L  LGL+
Sbjct: 260 CYLRSLTYLDLSENALNGSIPASLGNLNNLSFLFLYGNQLSGSIPEEIGYLRSLNVLGLS 319

Query: 156 ENSLT-SLPDSLANLQQLRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHP-DI 212
           EN+L  S+P SL NL+ L  L+L +N+L+  +P  +  L +L +LYL  N++    P  +
Sbjct: 320 ENALNGSIPASLGNLKNLSRLNLVNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASL 379

Query: 213 QYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQ 270
             L+NLSML + +N++   +P  LG L NL  L L +N L   +P+EIG  + L  LDL 
Sbjct: 380 GNLNNLSMLYLYNNQLSGSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLSSLTYLDLS 439

Query: 271 HNELVN-IPDMLGNLINLTRLRLSYNRL-ESVPETLSKCVHLNEFNVEGCAL-SSLPDGL 327
           +N +   IP   GN+ NL  L L  N+L  SVPE +     LN  ++   AL  S+P   
Sbjct: 440 NNSINGFIPASFGNMSNLAFLFLYENQLASSVPEEIGYLRSLNVLDLSENALNGSIPASF 499

Query: 328 -----------------------LSSLTSINNITLSRNKFTAY--PSGG----------- 351
                                  +  L S+N + LS N        S G           
Sbjct: 500 GNLNNLSRLNLVNNQLSGSIPEEIGYLRSLNVLDLSENALNGSIPASFGNLNNLSRLNLV 559

Query: 352 --------PTQFTSVYSIN---FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDL 399
                   P +   + S+N      N ++           NLS + + +N L+ S+P ++
Sbjct: 560 NNQLSGSIPEEIGYLRSLNDLGLSENALNGSIPASLGNLNNLSMLYLYNNQLSGSIPEEI 619

Query: 400 GTWVGLTELNLGTNQISKL-SEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLE 457
           G    LT L+LG N ++ L      N+ NL+ L+L+ NNL+ ++PSS+ NL  L+ L + 
Sbjct: 620 GYLSSLTYLSLGNNSLNGLIPASFGNMRNLQALILNDNNLIGEIPSSVCNLTSLEVLYMP 679

Query: 458 ENKLES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQ-SIPEEI 514
            N L+  +P  +G +  LQ L + SN     LP +I +LT+L  L  G NNL+ +IP+  
Sbjct: 680 RNNLKGKVPQCLGNISNLQVLSMSSNSFSGELPSSISNLTSLQILDFGRNNLEGAIPQCF 739

Query: 515 GTLENLH------------------------TLYLNDNTCLNNIPFELALCSNLQIMSLD 550
           G + +L                         +L L+ N   + IP  L  C  LQ++ L 
Sbjct: 740 GNISSLEVFDMQNNKLSGTLPTNFSIGCSLISLNLHGNELEDEIPRSLDNCKKLQVLDLG 799

Query: 551 NCPLSQIPSEIVVGGPSLIIRYL---KMQGPYRT 581
           +  L+      +   P L +  L   K+ GP R+
Sbjct: 800 DNQLNDTFPMWLGTLPELRVLRLTSNKLHGPIRS 833



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 184/516 (35%), Positives = 269/516 (52%), Gaps = 56/516 (10%)

Query: 92  EKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLT 150
           E  +LR   +  L ++    SI   P SV  L +L  LYLY N+L  S+P +I Y+ +LT
Sbjct: 162 EIGYLRSLTKLSLGINFLSGSI---PASVGNLNNLSFLYLYNNQLSGSIPEEISYLRSLT 218

Query: 151 CLGLAENSLT-SLPDSLAN------------------------LQQLRVLDLRHNKLN-E 184
            L L++N+L  S+P SL N                        L+ L  LDL  N LN  
Sbjct: 219 ELDLSDNALNGSIPASLGNMNNLSFLFLYGNQLSGSIPEEICYLRSLTYLDLSENALNGS 278

Query: 185 LPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIR-ELPPELGELKNLV 242
           +P  +  L +L  L+L  N++    P+ I YL +L++L + +N +   +P  LG LKNL 
Sbjct: 279 IPASLGNLNNLSFLFLYGNQLSGSIPEEIGYLRSLNVLGLSENALNGSIPASLGNLKNLS 338

Query: 243 TLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE-S 299
            L+L +N L   +P  +GN   L  L L +N+L   IP  LGNL NL+ L L  N+L  S
Sbjct: 339 RLNLVNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSMLYLYNNQLSGS 398

Query: 300 VPETLSKCVHLNEFNVEGCALS-SLPD--GLLSSLTSINNITLSRNKFTAYPSGGPTQFT 356
           +P +L    +L+   +    LS S+P+  G LSSLT ++   LS N    +    P  F 
Sbjct: 399 IPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLSSLTYLD---LSNNSINGFI---PASFG 452

Query: 357 SVYSINF----EHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLG 411
           ++ ++ F    E+     +P  I    ++L+ +++ +N L  S+P   G    L+ LNL 
Sbjct: 453 NMSNLAFLFLYENQLASSVPEEI-GYLRSLNVLDLSENALNGSIPASFGNLNNLSRLNLV 511

Query: 412 TNQIS-KLSEDIQNLVNLEVLVLSNNLLK-KLPSSIGNLRKLKCLDLEENKLE-SLPNEI 468
            NQ+S  + E+I  L +L VL LS N L   +P+S GNL  L  L+L  N+L  S+P EI
Sbjct: 512 NNQLSGSIPEEIGYLRSLNVLDLSENALNGSIPASFGNLNNLSRLNLVNNQLSGSIPEEI 571

Query: 469 GFLKELQRLILQSNQL-VSLPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTLENLHTLYLN 526
           G+L+ L  L L  N L  S+P ++G+L NLS L +  N L  SIPEEIG L +L  L L 
Sbjct: 572 GYLRSLNDLGLSENALNGSIPASLGNLNNLSMLYLYNNQLSGSIPEEIGYLSSLTYLSLG 631

Query: 527 DNTCLNNIPFELALCSNLQIMSL-DNCPLSQIPSEI 561
           +N+    IP       NLQ + L DN  + +IPS +
Sbjct: 632 NNSLNGLIPASFGNMRNLQALILNDNNLIGEIPSSV 667



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 148/432 (34%), Positives = 231/432 (53%), Gaps = 44/432 (10%)

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT-SLPDSLANLQQLRVLD 176
           PS+E L  L +  +YG    ++P +IG +TNL  L L  N ++ ++P  +  L +L+++ 
Sbjct: 95  PSLENL-DLSKNNIYG----TIPPEIGNLTNLVYLDLNNNQISGTIPPQIGLLAKLQIIR 149

Query: 177 LRHNKLNE-LPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSMLSMRDNKIR-ELPP 233
           + HN+LN  +P  +  L SL  L L  N +    P  +  L+NLS L + +N++   +P 
Sbjct: 150 IFHNQLNGFIPKEIGYLRSLTKLSLGINFLSGSIPASVGNLNNLSFLYLYNNQLSGSIPE 209

Query: 234 ELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELV-NIPDMLGNLINLTRLR 291
           E+  L++L  LDL+ N L   +P  +GN   L  L L  N+L  +IP+ +  L +LT L 
Sbjct: 210 EISYLRSLTELDLSDNALNGSIPASLGNMNNLSFLFLYGNQLSGSIPEEICYLRSLTYLD 269

Query: 292 LSYNRLE-SVPETLSKCVHLNEFNVEGCALS-SLPDGLLSSLTSINNITLSRNKFTAYPS 349
           LS N L  S+P +L    +L+   + G  LS S+P+  +  L S+N + LS N       
Sbjct: 270 LSENALNGSIPASLGNLNNLSFLFLYGNQLSGSIPEE-IGYLRSLNVLGLSENALNG--- 325

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTEL 408
                                IP  +    KNLS++N+ +N L+ S+P  LG    L+ L
Sbjct: 326 --------------------SIPASL-GNLKNLSRLNLVNNQLSGSIPASLGNLNNLSML 364

Query: 409 NLGTNQIS-KLSEDIQNLVNLEVLVLSNNLLK-KLPSSIGNLRKLKCLDLEENKLE-SLP 465
            L  NQ+S  +   + NL NL +L L NN L   +P+S+GNL  L  L L  N+L  S+P
Sbjct: 365 YLYNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSRLYLYNNQLSGSIP 424

Query: 466 NEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNL-QSIPEEIGTLENLHTL 523
            EIG+L  L  L L +N +   +P + G+++NL++L + EN L  S+PEEIG L +L+ L
Sbjct: 425 EEIGYLSSLTYLDLSNNSINGFIPASFGNMSNLAFLFLYENQLASSVPEEIGYLRSLNVL 484

Query: 524 YLNDNTCLNNIP 535
            L++N    +IP
Sbjct: 485 DLSENALNGSIP 496



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 119/339 (35%), Positives = 181/339 (53%), Gaps = 13/339 (3%)

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDML 281
           ++N    +PPE+G L NLV LDL +N +   +P +IG    L  + + HN+L   IP  +
Sbjct: 104 KNNIYGTIPPEIGNLTNLVYLDLNNNQISGTIPPQIGLLAKLQIIRIFHNQLNGFIPKEI 163

Query: 282 GNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALS-SLPDGLLSSLTSINNITL 339
           G L +LT+L L  N L  S+P ++    +L+   +    LS S+P+  +S L S+  + L
Sbjct: 164 GYLRSLTKLSLGINFLSGSIPASVGNLNNLSFLYLYNNQLSGSIPEE-ISYLRSLTELDL 222

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQID-KIPYGIFSRAKNLSKVNMKDNLLT-SLPL 397
           S N              ++  +    NQ+   IP  I    ++L+ +++ +N L  S+P 
Sbjct: 223 SDNALNGSIPASLGNMNNLSFLFLYGNQLSGSIPEEI-CYLRSLTYLDLSENALNGSIPA 281

Query: 398 DLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVLSNNLL-KKLPSSIGNLRKLKCLD 455
            LG    L+ L L  NQ+S  + E+I  L +L VL LS N L   +P+S+GNL+ L  L+
Sbjct: 282 SLGNLNNLSFLFLYGNQLSGSIPEEIGYLRSLNVLGLSENALNGSIPASLGNLKNLSRLN 341

Query: 456 LEENKLE-SLPNEIGFLKELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGENNLQ-SIPE 512
           L  N+L  S+P  +G L  L  L L +NQL  S+P ++G+L NLS L +  N L  SIP 
Sbjct: 342 LVNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPA 401

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
            +G L NL  LYL +N    +IP E+   S+L  + L N
Sbjct: 402 SLGNLNNLSRLYLYNNQLSGSIPEEIGYLSSLTYLDLSN 440



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 222/471 (47%), Gaps = 62/471 (13%)

Query: 137 ASLPSQIGYVTNLTCLGLAENSLT-------------------------SLPDSLANLQQ 171
            S+P +IGY+ +L  L L+EN+L                          S+P+ +  L+ 
Sbjct: 517 GSIPEEIGYLRSLNVLDLSENALNGSIPASFGNLNNLSRLNLVNNQLSGSIPEEIGYLRS 576

Query: 172 LRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIR 229
           L  L L  N LN  +P  +  L +L +LYL  N++    P+ I YLS+L+ LS+ +N + 
Sbjct: 577 LNDLGLSENALNGSIPASLGNLNNLSMLYLYNNQLSGSIPEEIGYLSSLTYLSLGNNSLN 636

Query: 230 EL-PPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLIN 286
            L P   G ++NL  L L  N+L  E+P  + N T L  L +  N L   +P  LGN+ N
Sbjct: 637 GLIPASFGNMRNLQALILNDNNLIGEIPSSVCNLTSLEVLYMPRNNLKGKVPQCLGNISN 696

Query: 287 LTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           L  L +S N     +P ++S    L   +     L         +++S+    +  NK +
Sbjct: 697 LQVLSMSSNSFSGELPSSISNLTSLQILDFGRNNLEGAIPQCFGNISSLEVFDMQNNKLS 756

Query: 346 AYPSGGPTQFT---SVYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLG 400
                 PT F+   S+ S+N   N++ D+IP  +    K L  +++ DN L  + P+ LG
Sbjct: 757 GTL---PTNFSIGCSLISLNLHGNELEDEIPRSL-DNCKKLQVLDLGDNQLNDTFPMWLG 812

Query: 401 TWVGLTELNLGTNQIS---KLSEDIQNLVNLEVLVLSNNLLKK-LPSSIG-NLRKLKCLD 455
           T   L  L L +N++    + S       +L ++ LS N   + LP+S+  +L+ ++ +D
Sbjct: 813 TLPELRVLRLTSNKLHGPIRSSRAEIMFPDLRIIDLSRNAFSQDLPTSLFEHLKGMRTVD 872

Query: 456 --LEENKLESLPNEI------GFLKELQRLI-------LQSNQLVS-LPRAIGHLTNLSY 499
             +EE   ES  ++       G   E+ R++       L SN+    +P  +G L  +  
Sbjct: 873 KTMEEPSYESYYDDSVVVVTKGLELEIVRILSLYTVIDLSSNKFEGHIPSVLGDLIAIRI 932

Query: 500 LSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
           L+V  N LQ  IP  +G+L  L +L L+ N     IP +LA  + L+ ++L
Sbjct: 933 LNVSHNALQGYIPSSLGSLSILESLDLSFNQLSGEIPQQLASLTFLEFLNL 983



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 67/143 (46%), Gaps = 25/143 (17%)

Query: 422 IQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLIL 479
             +L +LE L LS NN+   +P  IGNL  L  LDL  N++  ++P +IG L +LQ + +
Sbjct: 91  FSSLPSLENLDLSKNNIYGTIPPEIGNLTNLVYLDLNNNQISGTIPPQIGLLAKLQIIRI 150

Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
             NQL                         IP+EIG L +L  L L  N    +IP  + 
Sbjct: 151 FHNQLNGF----------------------IPKEIGYLRSLTKLSLGINFLSGSIPASVG 188

Query: 540 LCSNLQIMSLDNCPLS-QIPSEI 561
             +NL  + L N  LS  IP EI
Sbjct: 189 NLNNLSFLYLYNNQLSGSIPEEI 211



 Score = 38.5 bits (88), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 24/103 (23%)

Query: 174 VLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
           V+DL  NK    +P V+  L +++IL +  N ++                        +P
Sbjct: 908 VIDLSSNKFEGHIPSVLGDLIAIRILNVSHNALQGY----------------------IP 945

Query: 233 PELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNEL 274
             LG L  L +LDL+ N L  E+P+++ + T L  L+L HN L
Sbjct: 946 SSLGSLSILESLDLSFNQLSGEIPQQLASLTFLEFLNLSHNYL 988


>gi|353230339|emb|CCD76510.1| cell polarity protein [Schistosoma mansoni]
          Length = 1450

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 197/372 (52%), Gaps = 9/372 (2%)

Query: 175 LDLRHNKLNELPM-VVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           +D RH+KL ++P  V+    +L+   L  N+IK +  +   L+ + +L++ DN++  LP 
Sbjct: 18  IDRRHSKLEQVPDDVIRNFRTLEECRLDANQIKELPKNSLRLTRIRLLTLSDNELTRLPT 77

Query: 234 ELGELKNLVTLDLAHNHL--EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLR 291
            +G   NLV LD++ N +   ELP  I  C  L +LD+ +N L ++P     L NL  L 
Sbjct: 78  GIGSFSNLVELDISRNGMISAELPASIRFCDSLQSLDVSNNPLQSLPAGFCQLRNLRVLC 137

Query: 292 LSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA-YPSG 350
           L+   +  +PE +     L +  +    L S+PD   + L  +  + L  N+F    P  
Sbjct: 138 LNDISIAELPEEIGSLQLLEKLELRDNCLKSIPDS-FADLIHLEFLDLGANEFQELSPVI 196

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
           G  Q + +  +  + N++  +P  +     NL ++++ +NL+++LP  +   V L++LNL
Sbjct: 197 G--QLSQLSELWIDDNELRSLPKEL-GNLGNLQQLDLSENLISTLPESISGLVSLSDLNL 253

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N I+ L   + +L  L +L L+ N L  +  +IGN   L+ L L EN L  LP+ IG 
Sbjct: 254 SQNSITHLPNGLGDLDKLIILKLNQNRLLTVTPTIGNCSSLQELYLTENFLSKLPSSIGN 313

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  +  L +  NQL  LP  IG  T+L+ LS+ ENNL  +P+EIG    L  L ++ N  
Sbjct: 314 LVSMFHLNVDQNQLTELPSEIGQCTSLNILSLRENNLHRLPDEIGNCTRLRVLDVSGNR- 372

Query: 531 LNNIPFELALCS 542
           L+ +PF L+ CS
Sbjct: 373 LDRLPFSLSRCS 384



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 201/403 (49%), Gaps = 10/403 (2%)

Query: 105 NLDLSKSSITHLPPSV-EKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLP 163
           ++D   S +  +P  V      LEE  L  N++  LP     +T +  L L++N LT LP
Sbjct: 17  HIDRRHSKLEQVPDDVIRNFRTLEECRLDANQIKELPKNSLRLTRIRLLTLSDNELTRLP 76

Query: 164 DSLANLQQLRVLDLRHNKL--NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
             + +   L  LD+  N +   ELP  +    SL+ L +  N ++++      L NL +L
Sbjct: 77  TGIGSFSNLVELDISRNGMISAELPASIRFCDSLQSLDVSNNPLQSLPAGFCQLRNLRVL 136

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + D  I ELP E+G L+ L  L+L  N L+ +P    +   L  LDL  NE   +  ++
Sbjct: 137 CLNDISIAELPEEIGSLQLLEKLELRDNCLKSIPDSFADLIHLEFLDLGANEFQELSPVI 196

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  L+ L +  N L S+P+ L    +L + ++    +S+LP+  +S L S++++ LS+
Sbjct: 197 GQLSQLSELWIDDNELRSLPKELGNLGNLQQLDLSENLISTLPES-ISGLVSLSDLNLSQ 255

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N  T  P+ G      +  +    N++  +   I     +L ++ + +N L+ LP  +G 
Sbjct: 256 NSITHLPN-GLGDLDKLIILKLNQNRLLTVTPTI-GNCSSLQELYLTENFLSKLPSSIGN 313

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
            V +  LN+  NQ+++L  +I    +L +L L  N L +LP  IGN  +L+ LD+  N+L
Sbjct: 314 LVSMFHLNVDQNQLTELPSEIGQCTSLNILSLRENNLHRLPDEIGNCTRLRVLDVSGNRL 373

Query: 462 ESLPNEIGFLKELQRLILQSNQ---LVSLPRAIGHLTNLSYLS 501
           + LP  +     L  L L  NQ   +++L R +  +T   YL+
Sbjct: 374 DRLPFSLSRCS-LTALWLSQNQSQPVITLQRDVDPVTQEQYLT 415



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 171/361 (47%), Gaps = 52/361 (14%)

Query: 102 NILNLDLSKSSI--THLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL 159
           N++ LD+S++ +    LP S+     L+ L +  N L SLP+    + NL  L L + S+
Sbjct: 84  NLVELDISRNGMISAELPASIRFCDSLQSLDVSNNPLQSLPAGFCQLRNLRVLCLNDISI 143

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
             LP+ + +LQ L  L+LR N L  +P     L  L+ L L  N  + + P I  LS LS
Sbjct: 144 AELPEEIGSLQLLEKLELRDNCLKSIPDSFADLIHLEFLDLGANEFQELSPVIGQLSQLS 203

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L + DN++R LP ELG L NL  LDL+ N +  LP+ I     L  L+L  N + ++P+
Sbjct: 204 ELWIDDNELRSLPKELGNLGNLQQLDLSENLISTLPESISGLVSLSDLNLSQNSITHLPN 263

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            LG+L  L  L+L+ NRL +V  T+  C  L E  +    LS LP       +SI N+  
Sbjct: 264 GLGDLDKLIILKLNQNRLLTVTPTIGNCSSLQELYLTENFLSKLP-------SSIGNL-- 314

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
                            S++ +N + NQ                        LT LP ++
Sbjct: 315 ----------------VSMFHLNVDQNQ------------------------LTELPSEI 334

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G    L  L+L  N + +L ++I N   L VL +S N L +LP S+     L  L L +N
Sbjct: 335 GQCTSLNILSLRENNLHRLPDEIGNCTRLRVLDVSGNRLDRLPFSLSRC-SLTALWLSQN 393

Query: 460 K 460
           +
Sbjct: 394 Q 394


>gi|124010202|ref|ZP_01694858.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
 gi|123983746|gb|EAY24173.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
          Length = 521

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 143/429 (33%), Positives = 214/429 (49%), Gaps = 27/429 (6%)

Query: 100 EENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL 159
           E N+ +L +   S+  LP S+ KL +L  L L  N L  LP  IG +  L  L +  NSL
Sbjct: 99  ELNLYSLRIKSDSLIALPKSISKLKNLYRLELNANSLTRLPKGIGKLQKLQRLKIGSNSL 158

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
            +LP S+  LQ L+ L LR + L +LP  + KL +LK L LR + +K +   I  L NL 
Sbjct: 159 RALPKSIGKLQNLKKLILRVDALKKLPKSIGKLQNLKKLILRADALKKLPKSIGKLQNLK 218

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L +R + +++LP  +G+L+NL  L L  + L++LPK IG    L  L LQ N L  +P 
Sbjct: 219 KLILRADALKKLPKSIGKLQNLKKLILRADALKKLPKSIGRLPNLEQLVLQVNRLTTLPK 278

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            L  L  L ++ L  + L ++P+++     L    +E   L +L  G+            
Sbjct: 279 SLSQLPKLKKMTLIAHHLRTLPKSIGNFPELEMLELEVNNLVALTPGI------------ 326

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
                         QF  +  +   + Q   +P  I    +NL  + + +  LT+LP  +
Sbjct: 327 -------------GQFKQLKYLKIVNGQFATLPQSI-GDLQNLEMLFLLNVPLTTLPKGI 372

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G    L  L +  ++++ L E I NL NL +L LS N L +LP SIGNL+ L  L+L  N
Sbjct: 373 GNLKKLRRLQILKSKLTTLPEAIDNLQNLVLLNLSYNQLTRLPESIGNLQNLGNLNLSHN 432

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L   P  +  L  L  L    NQL SLP++IG L  L YL +  N L+++P+    L+ 
Sbjct: 433 QLTQFPESLSKLSGLGTLNANHNQLTSLPKSIGALKGLVYLQLRYNQLKTLPKSFYKLD- 491

Query: 520 LHTLYLNDN 528
           L  LY+  N
Sbjct: 492 LINLYIAHN 500



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 140/437 (32%), Positives = 205/437 (46%), Gaps = 50/437 (11%)

Query: 125 HLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNE 184
           +L  L +  + L +LP  I  + NL  L L  NSLT LP  +  LQ+L+ L +  N L  
Sbjct: 101 NLYSLRIKSDSLIALPKSISKLKNLYRLELNANSLTRLPKGIGKLQKLQRLKIGSNSLRA 160

Query: 185 LPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTL 244
           LP  + KL +LK L LR + +K +   I  L NL  L +R + +++LP  +G+L+NL  L
Sbjct: 161 LPKSIGKLQNLKKLILRVDALKKLPKSIGKLQNLKKLILRADALKKLPKSIGKLQNLKKL 220

Query: 245 DLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETL 304
            L  + L++LPK IG    L  L L+ + L  +P  +G L NL +L L  NRL ++P++L
Sbjct: 221 ILRADALKKLPKSIGKLQNLKKLILRADALKKLPKSIGRLPNLEQLVLQVNRLTTLPKSL 280

Query: 305 SKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFE 364
           S+   L +  +    L +LP        SI N                  F  +  +  E
Sbjct: 281 SQLPKLKKMTLIAHHLRTLPK-------SIGN------------------FPELEMLELE 315

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN 424
            N +  +  GI                        G +  L  L +   Q + L + I +
Sbjct: 316 VNNLVALTPGI------------------------GQFKQLKYLKIVNGQFATLPQSIGD 351

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           L NLE+L L N  L  LP  IGNL+KL+ L + ++KL +LP  I  L+ L  L L  NQL
Sbjct: 352 LQNLEMLFLLNVPLTTLPKGIGNLKKLRRLQILKSKLTTLPEAIDNLQNLVLLNLSYNQL 411

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
             LP +IG+L NL  L++  N L   PE +  L  L TL  N N  L ++P  +     L
Sbjct: 412 TRLPESIGNLQNLGNLNLSHNQLTQFPESLSKLSGLGTLNANHNQ-LTSLPKSIGALKGL 470

Query: 545 QIMSLDNCPLSQIPSEI 561
             + L    L  +P   
Sbjct: 471 VYLQLRYNQLKTLPKSF 487



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 117/374 (31%), Positives = 181/374 (48%), Gaps = 26/374 (6%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            K +N+  L+L+ +S+T LP  + KL  L+ L +  N L +LP  IG + NL  L L  +
Sbjct: 120 SKLKNLYRLELNANSLTRLPKGIGKLQKLQRLKIGSNSLRALPKSIGKLQNLKKLILRVD 179

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           +L  LP S+  LQ L+ L LR + L +LP  + KL +LK L LR + +K +   I  L N
Sbjct: 180 ALKKLPKSIGKLQNLKKLILRADALKKLPKSIGKLQNLKKLILRADALKKLPKSIGKLQN 239

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHN-----------------------HLEEL 254
           L  L +R + +++LP  +G L NL  L L  N                       HL  L
Sbjct: 240 LKKLILRADALKKLPKSIGRLPNLEQLVLQVNRLTTLPKSLSQLPKLKKMTLIAHHLRTL 299

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           PK IGN   L  L+L+ N LV +   +G    L  L++   +  ++P+++    +L    
Sbjct: 300 PKSIGNFPELEMLELEVNNLVALTPGIGQFKQLKYLKIVNGQFATLPQSIGDLQNLEMLF 359

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +    L++LP G + +L  +  + + ++K T  P        ++  +N  +NQ+ ++P  
Sbjct: 360 LLNVPLTTLPKG-IGNLKKLRRLQILKSKLTTLPE-AIDNLQNLVLLNLSYNQLTRLPES 417

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           I    +NL  +N+  N LT  P  L    GL  LN   NQ++ L + I  L  L  L L 
Sbjct: 418 I-GNLQNLGNLNLSHNQLTQFPESLSKLSGLGTLNANHNQLTSLPKSIGALKGLVYLQLR 476

Query: 435 NNLLKKLPSSIGNL 448
            N LK LP S   L
Sbjct: 477 YNQLKTLPKSFYKL 490



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 173/356 (48%), Gaps = 26/356 (7%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K + +  L +  +S+  LP S+ KL +L++L L  + L  LP  IG + NL  L L  ++
Sbjct: 144 KLQKLQRLKIGSNSLRALPKSIGKLQNLKKLILRVDALKKLPKSIGKLQNLKKLILRADA 203

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L  LP S+  LQ L+ L LR + L +LP  + KL +LK L LR + +K +   I  L NL
Sbjct: 204 LKKLPKSIGKLQNLKKLILRADALKKLPKSIGKLQNLKKLILRADALKKLPKSIGRLPNL 263

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L ++ N++  LP  L +L  L  + L  +HL  LPK IGN   L  L+L+ N LV + 
Sbjct: 264 EQLVLQVNRLTTLPKSLSQLPKLKKMTLIAHHLRTLPKSIGNFPELEMLELEVNNLVALT 323

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
             +G    L  L++   +  ++P+++    +L    +    L++LP G+  +L  +  + 
Sbjct: 324 PGIGQFKQLKYLKIVNGQFATLPQSIGDLQNLEMLFLLNVPLTTLPKGI-GNLKKLRRLQ 382

Query: 339 LSRNKFTAYPSG------------GPTQFTSV----------YSINFEHNQIDKIPYGIF 376
           + ++K T  P                 Q T +           ++N  HNQ+ + P  + 
Sbjct: 383 ILKSKLTTLPEAIDNLQNLVLLNLSYNQLTRLPESIGNLQNLGNLNLSHNQLTQFPESL- 441

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ--NLVNLEV 430
           S+   L  +N   N LTSLP  +G   GL  L L  NQ+  L +     +L+NL +
Sbjct: 442 SKLSGLGTLNANHNQLTSLPKSIGALKGLVYLQLRYNQLKTLPKSFYKLDLINLYI 497



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 161/365 (44%), Gaps = 73/365 (20%)

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
           +M+   DN I  L P + ELK+L  L +   +L+ LPK  G                   
Sbjct: 59  TMVLYGDNVI-NLSPRISELKDLRGLIIKCKNLKTLPKNFGE------------------ 99

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
                 +NL  LR+  + L ++P+++SK  +L    +   +L+ LP G+   L  +  + 
Sbjct: 100 ------LNLYSLRIKSDSLIALPKSISKLKNLYRLELNANSLTRLPKGI-GKLQKLQRLK 152

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
           +  N   A P                             + +NL K+ ++ + L  LP  
Sbjct: 153 IGSNSLRALPKS-------------------------IGKLQNLKKLILRVDALKKLPKS 187

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L +L L  + + KL + I  L NL+ L+L  + LKKLP SIG L+ LK L L  
Sbjct: 188 IGKLQNLKKLILRADALKKLPKSIGKLQNLKKLILRADALKKLPKSIGKLQNLKKLILRA 247

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           + L+ LP  IG L  L++L+LQ N+L +LP+++  L  L  +++  ++L+++P+ IG   
Sbjct: 248 DALKKLPKSIGRLPNLEQLVLQVNRLTTLPKSLSQLPKLKKMTLIAHHLRTLPKSIGNFP 307

Query: 519 NLHTLYLNDNTC----------------------LNNIPFELALCSNLQIMSLDNCPLSQ 556
            L  L L  N                           +P  +    NL+++ L N PL+ 
Sbjct: 308 ELEMLELEVNNLVALTPGIGQFKQLKYLKIVNGQFATLPQSIGDLQNLEMLFLLNVPLTT 367

Query: 557 IPSEI 561
           +P  I
Sbjct: 368 LPKGI 372



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 2/113 (1%)

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
           R ++ + L  + + +L   I  LK+L+ LI++   L +LP+  G L NL  L +  ++L 
Sbjct: 55  RPIETMVLYGDNVINLSPRISELKDLRGLIIKCKNLKTLPKNFGEL-NLYSLRIKSDSLI 113

Query: 509 SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           ++P+ I  L+NL+ L LN N+ L  +P  +     LQ + + +  L  +P  I
Sbjct: 114 ALPKSISKLKNLYRLELNANS-LTRLPKGIGKLQKLQRLKIGSNSLRALPKSI 165


>gi|402861004|ref|XP_003894903.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4,
           partial [Papio anubis]
          Length = 510

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 144/497 (28%), Positives = 229/497 (46%), Gaps = 55/497 (11%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +D S  S+T +P  +   T LEE++L  N++  +P +I  + N+  L L +N+L SL  +
Sbjct: 30  IDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPA 89

Query: 166 LANLQQLRVLDLRHN------------------------KLNELPMVVYK-LTSLKILYL 200
           L  L  L  LDL +N                         L E+P+V+ K L  L++L L
Sbjct: 90  LGLLSSLERLDLSYNPIFSSSLLVVSFLHALRELRLYQTDLKEIPVVICKNLHHLELLGL 149

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
             N +K +  +I   + L  + ++ N+    P EL  L NL  +DL  N +  +P+EIG+
Sbjct: 150 TGNHLKCLPKEIVNQTKLREIYLKRNQFEAFPQELCVLYNLEIIDLDENKIGAIPEEIGH 209

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
            T L    +  N L  +P  L +   L+ L LS+N L S+P++L++   + E  + G  L
Sbjct: 210 LTGLQKFYVASNNLPVLPASLCHCSQLSVLDLSHNLLHSIPKSLTELRKMTEIGLSGNPL 269

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
             +P  L+   TS++ + L          G      ++  ++   N +D  P  I +  K
Sbjct: 270 EKVP-YLICRWTSLHLLYLGNTGLHRL-RGSFRHLVNLRCLDLSQNHLDHCPLQICA-LK 326

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           NL  + + DN +  LP +LG+   L  L L  N+     E++ +L +LE L +  +   K
Sbjct: 327 NLEVLGLDDNKIGQLPSELGSLSKLKILGLTGNEFLSFPEEVLSLASLEKLYIGQDQGFK 386

Query: 441 L---PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L   P  I  L+ LK L +E N LE LP  +G +  L+ L  + N L  LP AI     L
Sbjct: 387 LTYVPEHIRKLQSLKELYIENNHLEYLPVSLGSMPNLEVLDCRHNLLKQLPDAICQAQAL 446

Query: 498 SYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
             L + +N L  +PE + +L NL  L L DN                        P+ + 
Sbjct: 447 KELLLEDNLLTHLPENLDSLVNLKVLTLMDN------------------------PMEEP 482

Query: 558 PSEIVVGGPSLIIRYLK 574
           P E+   G  +I +YLK
Sbjct: 483 PKEVCAEGNEVIWKYLK 499



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 161/319 (50%), Gaps = 29/319 (9%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+  +DL ++ I  +P  +  LT L++ Y+  N L  LP+ + + + L+ L L+ N
Sbjct: 185 CVLYNLEIIDLDENKIGAIPEEIGHLTGLQKFYVASNNLPVLPASLCHCSQLSVLDLSHN 244

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L S+P SL  L+++  + L  N L ++P ++ + TSL +LYL    +  +    ++L N
Sbjct: 245 LLHSIPKSLTELRKMTEIGLSGNPLEKVPYLICRWTSLHLLYLGNTGLHRLRGSFRHLVN 304

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N +   P ++  LKNL  L L  N + +LP E+G+ + L  L L  NE ++ 
Sbjct: 305 LRCLDLSQNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLSKLKILGLTGNEFLSF 364

Query: 278 PDMLGNLINLTRLRLSYN---RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           P+ + +L +L +L +  +   +L  VPE + K   L E  +E   L  LP     SL S+
Sbjct: 365 PEEVLSLASLEKLYIGQDQGFKLTYVPEHIRKLQSLKELYIENNHLEYLP----VSLGSM 420

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            N+ +                     ++  HN + ++P  I  +A+ L ++ ++DNLLT 
Sbjct: 421 PNLEV---------------------LDCRHNLLKQLPDAI-CQAQALKELLLEDNLLTH 458

Query: 395 LPLDLGTWVGLTELNLGTN 413
           LP +L + V L  L L  N
Sbjct: 459 LPENLDSLVNLKVLTLMDN 477


>gi|428168746|gb|EKX37687.1| hypothetical protein GUITHDRAFT_77856 [Guillardia theta CCMP2712]
          Length = 648

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 152/510 (29%), Positives = 246/510 (48%), Gaps = 44/510 (8%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD  +++++ LP S+ +L  L  + L  N L+ LP  +G + NL  L L++N LT +P S
Sbjct: 94  LDADENALSRLPQSLCELNKLRTIRLSCNSLSELPLGVGRLVNLETLTLSDNKLTRIPLS 153

Query: 166 LANLQQ---LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
             NL     L+VL+L  N+L+ LP     LT+L    ++ N        +Q  + L  L 
Sbjct: 154 FRNLSMLTNLQVLNLNRNQLDSLPAEFTGLTNLTSFSIQSNHFLQAPACLQLWTGLKELD 213

Query: 223 MRDNKIRELPPE-LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           +  NKI  LP + L  LK L  +D++ N L E+ +++     L   DL++N + ++P  L
Sbjct: 214 LSHNKITVLPVQILQPLKELSQVDVSSNQLVEVREDVSRLLHLRLFDLRNNLMTSLPGSL 273

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSI---NN 336
           G L  L  L +  N+L  +   +S C  L   ++    L+SLP   G+L+SL ++   +N
Sbjct: 274 GALKQLDTLLVDNNKLTELTAAISDCSSLTFLSLSKNNLTSLPPPLGILTSLKTLQVMDN 333

Query: 337 ITLS------------------RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
             LS                  RNK    P     + + +  ++ E N++ K+P  I   
Sbjct: 334 QLLSTMPAEVLLLSSLTVLSLARNKIEHLPEELGHRLSQLRMLDLESNKLKKLPDSI-GI 392

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV---NLEVLVLSN 435
           A +L  ++++ NL TSLP  + +   L EL L  N +S+L  ++  LV   +L  + L++
Sbjct: 393 AGSLKLLDLESNLFTSLPSVVLSLTRLEELRLAGNDLSQLPLELGRLVSPASLTSITLND 452

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI-LQSNQLVSLPRAIGHL 494
           N + ++P  I  L  L  L +  N +  LP     L    R + +  N L  LP  +G L
Sbjct: 453 NAISEVPGDISKLTSLVLLSMSNNNISQLPKHSFLLLSSLRSLNVAGNPLTVLPVTLGSL 512

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN--- 551
             L YL + +N L+ IP  +  L  L  L + DN  L+  P E+ L + L+ + L+N   
Sbjct: 513 KKLEYLDLNDNRLREIPASVCKLTRLRDLSVMDNKLLSIAP-EVGLITTLRRLQLENNAK 571

Query: 552 --CPLSQIPSEIVVGGPSLIIRYLK--MQG 577
             CP    P E+   G    + YL+  MQG
Sbjct: 572 LKCP----PVEVYSRGIQATLSYLRSIMQG 597



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 146/446 (32%), Positives = 227/446 (50%), Gaps = 11/446 (2%)

Query: 102 NILNLDLSKSSITHLPPS---VEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           N+  L LS + +T +P S   +  LT+L+ L L  N+L SLP++   +TNLT   +  N 
Sbjct: 136 NLETLTLSDNKLTRIPLSFRNLSMLTNLQVLNLNRNQLDSLPAEFTGLTNLTSFSIQSNH 195

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPM-VVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
               P  L     L+ LDL HNK+  LP+ ++  L  L  + +  N++  V  D+  L +
Sbjct: 196 FLQAPACLQLWTGLKELDLSHNKITVLPVQILQPLKELSQVDVSSNQLVEVREDVSRLLH 255

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L +  +R+N +  LP  LG LK L TL + +N L EL   I +C+ L  L L  N L ++
Sbjct: 256 LRLFDLRNNLMTSLPGSLGALKQLDTLLVDNNKLTELTAAISDCSSLTFLSLSKNNLTSL 315

Query: 278 PDMLGNLINLTRLRLSYNRL-ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           P  LG L +L  L++  N+L  ++P  +     L   ++    +  LP+ L   L+ +  
Sbjct: 316 PPPLGILTSLKTLQVMDNQLLSTMPAEVLLLSSLTVLSLARNKIEHLPEELGHRLSQLRM 375

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L  NK    P        S+  ++ E N    +P  + S  + L ++ +  N L+ LP
Sbjct: 376 LDLESNKLKKLPDSIGIA-GSLKLLDLESNLFTSLPSVVLSLTR-LEELRLAGNDLSQLP 433

Query: 397 LDLGTWVG---LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS-SIGNLRKLK 452
           L+LG  V    LT + L  N IS++  DI  L +L +L +SNN + +LP  S   L  L+
Sbjct: 434 LELGRLVSPASLTSITLNDNAISEVPGDISKLTSLVLLSMSNNNISQLPKHSFLLLSSLR 493

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
            L++  N L  LP  +G LK+L+ L L  N+L  +P ++  LT L  LSV +N L SI  
Sbjct: 494 SLNVAGNPLTVLPVTLGSLKKLEYLDLNDNRLREIPASVCKLTRLRDLSVMDNKLLSIAP 553

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFEL 538
           E+G +  L  L L +N  L   P E+
Sbjct: 554 EVGLITTLRRLQLENNAKLKCPPVEV 579



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 142/481 (29%), Positives = 238/481 (49%), Gaps = 36/481 (7%)

Query: 110 KSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLG---------------- 153
           K+ ++HLP  +   T L EL +  N+L  LPS + +   L  L                 
Sbjct: 6   KNYLSHLPLQLNASTGLTELRVANNQLLDLPSYLDFFGALVLLDARDNVLQSLPSSLTLL 65

Query: 154 -------LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK 206
                  ++ N +  LP++L +L  L  LD   N L+ LP  + +L  L+ + L  N + 
Sbjct: 66  SSLTRLRISRNKIEELPEALGSLVSLTELDADENALSRLPQSLCELNKLRTIRLSCNSLS 125

Query: 207 TVHPDIQYLSNLSMLSMRDNKIRELP---PELGELKNLVTLDLAHNHLEELPKEIGNCTM 263
            +   +  L NL  L++ DNK+  +P     L  L NL  L+L  N L+ LP E    T 
Sbjct: 126 ELPLGVGRLVNLETLTLSDNKLTRIPLSFRNLSMLTNLQVLNLNRNQLDSLPAEFTGLTN 185

Query: 264 LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP-ETLSKCVHLNEFNVEGCALSS 322
           L +  +Q N  +  P  L     L  L LS+N++  +P + L     L++ +V    L  
Sbjct: 186 LTSFSIQSNHFLQAPACLQLWTGLKELDLSHNKITVLPVQILQPLKELSQVDVSSNQLVE 245

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           + +  +S L  +    L  N  T+ P G       + ++  ++N++ ++   I S   +L
Sbjct: 246 VRED-VSRLLHLRLFDLRNNLMTSLP-GSLGALKQLDTLLVDNNKLTELTAAI-SDCSSL 302

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ-ISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           + +++  N LTSLP  LG    L  L +  NQ +S +  ++  L +L VL L+ N ++ L
Sbjct: 303 TFLSLSKNNLTSLPPPLGILTSLKTLQVMDNQLLSTMPAEVLLLSSLTVLSLARNKIEHL 362

Query: 442 PSSIGN-LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           P  +G+ L +L+ LDLE NKL+ LP+ IG    L+ L L+SN   SLP  +  LT L  L
Sbjct: 363 PEELGHRLSQLRMLDLESNKLKKLPDSIGIAGSLKLLDLESNLFTSLPSVVLSLTRLEEL 422

Query: 501 SVGENNLQSIPEEIGTL---ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
            +  N+L  +P E+G L    +L ++ LNDN  ++ +P +++  ++L ++S+ N  +SQ+
Sbjct: 423 RLAGNDLSQLPLELGRLVSPASLTSITLNDN-AISEVPGDISKLTSLVLLSMSNNNISQL 481

Query: 558 P 558
           P
Sbjct: 482 P 482



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 172/344 (50%), Gaps = 28/344 (8%)

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD----------- 268
           M++   N +  LP +L     L  L +A+N L +LP  +     LV LD           
Sbjct: 1   MINCDKNYLSHLPLQLNASTGLTELRVANNQLLDLPSYLDFFGALVLLDARDNVLQSLPS 60

Query: 269 ------------LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE 316
                       +  N++  +P+ LG+L++LT L    N L  +P++L +   L    + 
Sbjct: 61  SLTLLSSLTRLRISRNKIEELPEALGSLVSLTELDADENALSRLPQSLCELNKLRTIRLS 120

Query: 317 GCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG--GPTQFTSVYSINFEHNQIDKIPYG 374
             +LS LP G+   L ++  +TLS NK T  P      +  T++  +N   NQ+D +P  
Sbjct: 121 CNSLSELPLGV-GRLVNLETLTLSDNKLTRIPLSFRNLSMLTNLQVLNLNRNQLDSLPAE 179

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI-QNLVNLEVLVL 433
            F+   NL+  +++ N     P  L  W GL EL+L  N+I+ L   I Q L  L  + +
Sbjct: 180 -FTGLTNLTSFSIQSNHFLQAPACLQLWTGLKELDLSHNKITVLPVQILQPLKELSQVDV 238

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           S+N L ++   +  L  L+  DL  N + SLP  +G LK+L  L++ +N+L  L  AI  
Sbjct: 239 SSNQLVEVREDVSRLLHLRLFDLRNNLMTSLPGSLGALKQLDTLLVDNNKLTELTAAISD 298

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            ++L++LS+ +NNL S+P  +G L +L TL + DN  L+ +P E
Sbjct: 299 CSSLTFLSLSKNNLTSLPPPLGILTSLKTLQVMDNQLLSTMPAE 342


>gi|359486100|ref|XP_002274578.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1535

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 240/473 (50%), Gaps = 35/473 (7%)

Query: 112  SITHLPPSVEKLTHLEELYL-YGNKLASLPSQIGYVTNLTCLGLAENS-LTSLPDSLANL 169
            S+  + PSV  +  L  L L + ++L +LP  IGY+ +L  L L++ S     P+   N+
Sbjct: 763  SLIDIHPSVGNMKKLTTLSLRFCDQLKNLPDSIGYLESLESLDLSDCSKFVKFPEKGGNM 822

Query: 170  QQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF-NRIKTVHPDIQYLSNLSMLSMRDNKI 228
            + L  LDLR   + +LP  +  L SL+ L L F ++ +        + +L  L +R+  I
Sbjct: 823  KSLMKLDLRFTAIKDLPDSIGDLESLESLNLSFCSKFEKFPEKGGNMKSLRHLCLRNTAI 882

Query: 229  RELPPELGELKNLVTLDLAH-NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
            ++LP  +G+L++L+ L+L+  +  E+ P++ GN   L+ LDL++  + ++PD +G+L +L
Sbjct: 883  KDLPDSIGDLESLMFLNLSGCSKFEKFPEKGGNMKSLMELDLRYTAIKDLPDSIGDLESL 942

Query: 288  TRLRLS-YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR-NKFT 345
              L LS  ++ E  PE       L E +++  A+  LPD +   L S+ ++ LS  +KF 
Sbjct: 943  RLLDLSGCSKFEKFPEKGGNMKSLVELDLKNTAIKDLPDSI-GDLESLESLDLSDCSKFE 1001

Query: 346  AYPSGGPTQFTSVYSINFEHNQIDKIPYGI----------------FSR-------AKNL 382
             +P  G     S+  +   +  I  +P  I                F +        K+L
Sbjct: 1002 KFPEKG-GNMKSLKWLYLTNTAIKDLPDSIGDLESLLSLHLSDCSKFEKFPEKGGNMKSL 1060

Query: 383  SKVNMKDNLLTSLPLDLGTWVGLTELNLG-TNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
             K++++   +  LP  +G    L  L+L   ++  K  E   N+ +L+ L L N  +K L
Sbjct: 1061 MKLDLRYTAIKDLPDSIGDLESLRLLDLSDCSKFEKFPEKGGNMKSLKKLFLRNTAIKDL 1120

Query: 442  PSSIGNLRKLKCLDLEE-NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
            P SIG+L  L+ LDL + +K E  P + G +K L  L L +  +  LP +IG L +L +L
Sbjct: 1121 PDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLMDLDLTNTAIKDLPDSIGDLESLKFL 1180

Query: 501  SVGE-NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
             + + +  +  PE+ G +++L  L L  NT + ++P  ++   NL+ + L  C
Sbjct: 1181 VLSDCSKFEKFPEKGGNMKSLIHLDLK-NTAIKDLPTNISRLKNLERLMLGGC 1232



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 142/559 (25%), Positives = 253/559 (45%), Gaps = 72/559 (12%)

Query: 67   VKHPESNKPKPTTKKKEP--IQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSV-EKL 123
            V+    ++P   ++  +P  IQ  L   KE  + +    ++LDLSK        +V  K+
Sbjct: 621  VREKFPDEPNQWSRLWDPHDIQQALRTSKEIPKAQ---TISLDLSKLKRVCFDSNVFAKM 677

Query: 124  THLEELYL-----YGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLR 178
            T L  L +     Y +    LPS       L  L L  +++  L     +L++L+V+DL 
Sbjct: 678  TSLRLLKVHSGVYYHHFEDFLPSNFD-GEKLVELHLKCSNIKQLWQGHKDLERLKVIDLS 736

Query: 179  HNKLNELPMVVYK-LTSLKILYLRFN-RIKTVHPDIQYLSNLSMLSMRD-NKIRELPPEL 235
             ++ N + M  +  + +L+ L L     +  +HP +  +  L+ LS+R  ++++ LP  +
Sbjct: 737  CSR-NLIQMSEFSSMPNLERLILEGCVSLIDIHPSVGNMKKLTTLSLRFCDQLKNLPDSI 795

Query: 236  GELKNLVTLDLAH-NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
            G L++L +LDL+  +   + P++ GN   L+ LDL+   + ++PD +G+L +L  L LS+
Sbjct: 796  GYLESLESLDLSDCSKFVKFPEKGGNMKSLMKLDLRFTAIKDLPDSIGDLESLESLNLSF 855

Query: 295  -NRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTAYPSGG 351
             ++ E  PE       L    +   A+  LPD  G L SL  +N    S  KF  +P  G
Sbjct: 856  CSKFEKFPEKGGNMKSLRHLCLRNTAIKDLPDSIGDLESLMFLNLSGCS--KFEKFPEKG 913

Query: 352  PTQFTSVYSINFEHNQIDKIPYGI----------------FSR-------AKNLSKVNMK 388
                 S+  ++  +  I  +P  I                F +        K+L ++++K
Sbjct: 914  -GNMKSLMELDLRYTAIKDLPDSIGDLESLRLLDLSGCSKFEKFPEKGGNMKSLVELDLK 972

Query: 389  DNLLTSLPLDLGTWVGLTELNLG-TNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG- 446
            +  +  LP  +G    L  L+L   ++  K  E   N+ +L+ L L+N  +K LP SIG 
Sbjct: 973  NTAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKWLYLTNTAIKDLPDSIGD 1032

Query: 447  -----------------------NLRKLKCLDLEENKLESLPNEIGFLKELQRLIL-QSN 482
                                   N++ L  LDL    ++ LP+ IG L+ L+ L L   +
Sbjct: 1033 LESLLSLHLSDCSKFEKFPEKGGNMKSLMKLDLRYTAIKDLPDSIGDLESLRLLDLSDCS 1092

Query: 483  QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
            +    P   G++ +L  L +    ++ +P+ IG LE+L +L L+D +     P +     
Sbjct: 1093 KFEKFPEKGGNMKSLKKLFLRNTAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMK 1152

Query: 543  NLQIMSLDNCPLSQIPSEI 561
            +L  + L N  +  +P  I
Sbjct: 1153 SLMDLDLTNTAIKDLPDSI 1171



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 112/217 (51%), Gaps = 6/217 (2%)

Query: 134  NKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRH-NKLNELPMVVYKL 192
            +K    P + G + +L  L L   ++  LPDS+ +L+ LR+LDL   +K  + P     +
Sbjct: 1045 SKFEKFPEKGGNMKSLMKLDLRYTAIKDLPDSIGDLESLRLLDLSDCSKFEKFPEKGGNM 1104

Query: 193  TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD-NKIRELPPELGELKNLVTLDLAHNHL 251
             SLK L+LR   IK +   I  L +L  L + D +K  + P + G +K+L+ LDL +  +
Sbjct: 1105 KSLKKLFLRNTAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLMDLDLTNTAI 1164

Query: 252  EELPKEIGNCTMLVTLDLQH-NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
            ++LP  IG+   L  L L   ++    P+  GN+ +L  L L    ++ +P  +S+  +L
Sbjct: 1165 KDLPDSIGDLESLKFLVLSDCSKFEKFPEKGGNMKSLIHLDLKNTAIKDLPTNISRLKNL 1224

Query: 311  NEFNVEGCALSSLPDGLLS-SLTSINNITLSRNKFTA 346
                + GC  S L +GL+S  L ++  + +S+ K   
Sbjct: 1225 ERLMLGGC--SDLWEGLISNQLCNLQKLNISQCKMAG 1259


>gi|60327200|gb|AAX19023.1| Hcr2-p1.1 [Solanum pimpinellifolium]
          Length = 991

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 153/451 (33%), Positives = 232/451 (51%), Gaps = 43/451 (9%)

Query: 102 NILNLDLSKSSITH-LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSL 159
           N++ LDL+ + I+  +PP +  L  L+ + ++ N L   +P +IGY+ +LT L L  N L
Sbjct: 120 NLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNNHLNGFIPEEIGYLRSLTKLSLGINFL 179

Query: 160 T-SLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIK-TVHPDIQYLS 216
           + S+P SL NL  L  L L +N+L   +P  +  L SL  L L  N +  ++   +  L+
Sbjct: 180 SGSIPASLGNLNNLSSLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIRASLGDLN 239

Query: 217 NLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNEL 274
           NLS L +  N++   +P E+G L++L  L L  N L   +P  +GN   L  LDL +N+L
Sbjct: 240 NLSSLYLYHNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSRLDLYNNKL 299

Query: 275 VN-IPDMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALS-SLPD--GLLS 329
              IP+ +G L +LT L L  N L  S+P +L    +L    +    LS S+P+  G L 
Sbjct: 300 SGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLR 359

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
           SLT +   +L  N  +        +  + +S++  +NQ+                     
Sbjct: 360 SLTKL---SLGNNFLSGSIPASLGKLNNFFSMHLFNNQLSG------------------- 397

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQI-SKLSEDIQNLVNLEVLVLSNNLLK-KLPSSIGN 447
               S+P ++G    LT L+L  N +   +   + NL NL +L L NN L   +P  IG 
Sbjct: 398 ----SIPEEIGYLRSLTYLDLSENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGY 453

Query: 448 LRKLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGEN 505
           LR L  LDL+EN L  S+P  +G L  L RL L +NQL  S+P  IG+L++L+ L +G N
Sbjct: 454 LRSLTYLDLKENALNGSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLSSLTNLYLGNN 513

Query: 506 NLQS-IPEEIGTLENLHTLYLNDNTCLNNIP 535
           +L   IP   G + NL  L+LNDN  +  IP
Sbjct: 514 SLNGLIPASFGNMRNLQALFLNDNNLIGEIP 544



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 174/559 (31%), Positives = 266/559 (47%), Gaps = 76/559 (13%)

Query: 92  EKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLT 150
           E  +LR   +  L ++    SI   P S+  L +L  LYLY N+L  S+P +IGY+ +LT
Sbjct: 162 EIGYLRSLTKLSLGINFLSGSI---PASLGNLNNLSSLYLYNNQLSGSIPEEIGYLRSLT 218

Query: 151 CLGLAENSLT-SLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTV 208
            L L  N L+ S+  SL +L  L  L L HN+L   +P  +  L SL  L L  N +   
Sbjct: 219 KLSLGINFLSGSIRASLGDLNNLSSLYLYHNQLSGSIPEEIGYLRSLTKLSLGINFLSGS 278

Query: 209 HP-DIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLV 265
            P  +  L+NLS L + +NK+   +P E+G L++L  LDL  N L   +P  +GN   L 
Sbjct: 279 IPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLF 338

Query: 266 TLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALS-S 322
            L L +N+L   IP+ +G L +LT+L L  N L  S+P +L K  +    ++    LS S
Sbjct: 339 MLYLYNNQLSGSIPEEIGYLRSLTKLSLGNNFLSGSIPASLGKLNNFFSMHLFNNQLSGS 398

Query: 323 LPD--GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID-KIPYGIFSRA 379
           +P+  G L SLT ++   LS N              +++ +   +NQ+   IP  I    
Sbjct: 399 IPEEIGYLRSLTYLD---LSENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEI-GYL 454

Query: 380 KNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVLSNNL 437
           ++L+ +++K+N L  S+P  LG    L+ L L  NQ+S  + E+I  L +L  L L NN 
Sbjct: 455 RSLTYLDLKENALNGSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLSSLTNLYLGNNS 514

Query: 438 LKKL-PSSIGNLRKLKCLDLEENKL-------------------------ESLPNEIGFL 471
           L  L P+S GN+R L+ L L +N L                           +P  +G +
Sbjct: 515 LNGLIPASFGNMRNLQALFLNDNNLIGEIPSFVCNLTSLELLYMPRNNLKGKVPQCLGNI 574

Query: 472 KELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTLENLH-------- 521
            +L  L + SN     LP +I +LT+L  L  G NNL+ +IP+  G + +L         
Sbjct: 575 SDLLVLSMSSNSFSGELPSSISNLTSLKILDFGRNNLEGAIPQCFGNISSLQVFDMQNNK 634

Query: 522 ----------------TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGG 565
                           +L L+ N   + IP+ L  C  LQ++ L +  L+      +   
Sbjct: 635 LSGTLPTNFSIGCSLISLNLHGNELEDEIPWSLDNCKKLQVLDLGDNQLNDTFPMWLGTL 694

Query: 566 PSLIIRYL---KMQGPYRT 581
           P L +  L   K+ GP R+
Sbjct: 695 PELRVLRLTSNKLHGPIRS 713



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 147/498 (29%), Positives = 244/498 (48%), Gaps = 74/498 (14%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLT-SLPDSLANL---- 169
           +P S+ KL +   ++L+ N+L  S+P +IGY+ +LT L L+EN+L  S+P SL NL    
Sbjct: 375 IPASLGKLNNFFSMHLFNNQLSGSIPEEIGYLRSLTYLDLSENALNGSIPASLGNLNNLF 434

Query: 170 --------------------QQLRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTV 208
                               + L  LDL+ N LN  +P  +  L +L  LYL  N++   
Sbjct: 435 MLYLYNNQLSGSIPEEIGYLRSLTYLDLKENALNGSIPASLGNLNNLSRLYLYNNQLSGS 494

Query: 209 HPD-IQYLSNLSMLSMRDNKIREL-PPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLV 265
            P+ I YLS+L+ L + +N +  L P   G ++NL  L L  N+L  E+P  + N T L 
Sbjct: 495 IPEEIGYLSSLTNLYLGNNSLNGLIPASFGNMRNLQALFLNDNNLIGEIPSFVCNLTSLE 554

Query: 266 TLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLES-VPETLS-----KCVHLNEFNVEGC 318
            L +  N L   +P  LGN+ +L  L +S N     +P ++S     K +     N+EG 
Sbjct: 555 LLYMPRNNLKGKVPQCLGNISDLLVLSMSSNSFSGELPSSISNLTSLKILDFGRNNLEG- 613

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFT---SVYSINFEHNQI-DKIPYG 374
              ++P     +++S+    +  NK +      PT F+   S+ S+N   N++ D+IP+ 
Sbjct: 614 ---AIPQ-CFGNISSLQVFDMQNNKLSGTL---PTNFSIGCSLISLNLHGNELEDEIPWS 666

Query: 375 IFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQ----ISKLSEDIQNLVNLE 429
           +    K L  +++ DN L  + P+ LGT   L  L L +N+    I     +I    +L 
Sbjct: 667 L-DNCKKLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNKLHGPIRSSGAEIM-FPDLR 724

Query: 430 VLVLSNNLLKK-LPSSIG-NLRKLKCLD--LEENKLESLPNEI-----GFLKELQRLI-- 478
           ++ LS N   + LP+S+  +L+ ++ +D  +EE   E   + +     G   E+ R++  
Sbjct: 725 IIDLSRNAFSQDLPTSLFEHLKGMRTVDKTMEEPSYEIYYDSVVVVTKGLELEIVRILSL 784

Query: 479 -----LQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCL 531
                L SN+    +P  +G L  +  L+V  N LQ  IP  +G+L  L +L L+ N   
Sbjct: 785 YTVIDLSSNKFEGHIPSVLGDLIAIRVLNVSHNALQGYIPSSLGSLSILESLDLSFNQLS 844

Query: 532 NNIPFELALCSNLQIMSL 549
             IP +LA  + L+ ++L
Sbjct: 845 GEIPQQLASLTFLEFLNL 862



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 114/332 (34%), Positives = 161/332 (48%), Gaps = 60/332 (18%)

Query: 241 LVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE 298
           L  LDL++N++   +P EIGN T LV LDL  N++   IP  +G+L  L  +R+  N   
Sbjct: 97  LENLDLSNNNISVTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNN--- 153

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTAYPSGGPTQFT 356
                     HLN F         +P+  G L SLT ++                     
Sbjct: 154 ----------HLNGF---------IPEEIGYLRSLTKLS--------------------- 173

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQI 415
               INF    I            NLS + + +N L+ S+P ++G    LT+L+LG N +
Sbjct: 174 --LGINFLSGSIPAS----LGNLNNLSSLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFL 227

Query: 416 S-KLSEDIQNLVNLEVLVLSNNLLK-KLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLK 472
           S  +   + +L NL  L L +N L   +P  IG LR L  L L  N L  S+P  +G L 
Sbjct: 228 SGSIRASLGDLNNLSSLYLYHNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLN 287

Query: 473 ELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTLENLHTLYLNDNTC 530
            L RL L +N+L  S+P  IG+L +L+YL +GEN L  SIP  +G L NL  LYL +N  
Sbjct: 288 NLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQL 347

Query: 531 LNNIPFELALCSNLQIMSLDNCPLS-QIPSEI 561
             +IP E+    +L  +SL N  LS  IP+ +
Sbjct: 348 SGSIPEEIGYLRSLTKLSLGNNFLSGSIPASL 379


>gi|1184075|gb|AAC15779.1| Cf-2.1 [Solanum pimpinellifolium]
 gi|60327192|gb|AAX19019.1| Cf-2.1 [Solanum pimpinellifolium]
 gi|1587673|prf||2207203A Cf-2 gene
          Length = 1112

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 176/574 (30%), Positives = 275/574 (47%), Gaps = 90/574 (15%)

Query: 98  CKEENILNLDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLA 155
           C   ++  LDLS++++   +P S+  L +L  L+LYGN+L  S+P +IGY+ +L  LGL+
Sbjct: 260 CYLRSLTYLDLSENALNGSIPASLGNLNNLSFLFLYGNQLSGSIPEEIGYLRSLNVLGLS 319

Query: 156 ENSLT-SLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHP-DI 212
           EN+L  S+P SL NL+ L  L+L +N+L   +P  +  L +L +LYL  N++    P  +
Sbjct: 320 ENALNGSIPASLGNLKNLSRLNLVNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASL 379

Query: 213 QYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQ 270
             L+NLSML + +N++   +P  LG L NL  L L +N L   +P+EIG  + L  LDL 
Sbjct: 380 GNLNNLSMLYLYNNQLSGSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLSSLTYLDLS 439

Query: 271 HNELVN-IPDMLGNLINLTRLRLSYNRL-ESVPETLSKCVHLNEFNVEGCAL-SSLPDGL 327
           +N +   IP   GN+ NL  L L  N+L  SVPE +     LN  ++   AL  S+P   
Sbjct: 440 NNSINGFIPASFGNMSNLAFLFLYENQLASSVPEEIGYLRSLNVLDLSENALNGSIPASF 499

Query: 328 -----------------------LSSLTSINNITLSRNKFTAY--PSGG----------- 351
                                  +  L S+N + LS N        S G           
Sbjct: 500 GNLNNLSRLNLVNNQLSGSIPEEIGYLRSLNVLDLSENALNGSIPASFGNLNNLSRLNLV 559

Query: 352 --------PTQFTSVYSIN---FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDL 399
                   P +   + S+N      N ++           NLS + + +N L+ S+P ++
Sbjct: 560 NNQLSGSIPEEIGYLRSLNDLGLSENALNGSIPASLGNLNNLSMLYLYNNQLSGSIPEEI 619

Query: 400 GTWVGLTELNLGTNQISKL-SEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLE 457
           G    LT L+LG N ++ L      N+ NL+ L+L+ NNL+ ++PSS+ NL  L+ L + 
Sbjct: 620 GYLSSLTYLSLGNNSLNGLIPASFGNMRNLQALILNDNNLIGEIPSSVCNLTSLEVLYMP 679

Query: 458 ENKLES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQ-SIPEEI 514
            N L+  +P  +G +  LQ L + SN     LP +I +LT+L  L  G NNL+ +IP+  
Sbjct: 680 RNNLKGKVPQCLGNISNLQVLSMSSNSFSGELPSSISNLTSLQILDFGRNNLEGAIPQCF 739

Query: 515 GTLENLH------------------------TLYLNDNTCLNNIPFELALCSNLQIMSLD 550
           G + +L                         +L L+ N   + IP  L  C  LQ++ L 
Sbjct: 740 GNISSLEVFDMQNNKLSGTLPTNFSIGCSLISLNLHGNELEDEIPRSLDNCKKLQVLDLG 799

Query: 551 NCPLSQIPSEIVVGGPSLIIRYL---KMQGPYRT 581
           +  L+      +   P L +  L   K+ GP R+
Sbjct: 800 DNQLNDTFPMWLGTLPELRVLRLTSNKLHGPIRS 833



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 184/516 (35%), Positives = 269/516 (52%), Gaps = 56/516 (10%)

Query: 92  EKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLT 150
           E  +LR   +  L ++    SI   P SV  L +L  LYLY N+L  S+P +I Y+ +LT
Sbjct: 162 EIGYLRSLTKLSLGINFLSGSI---PASVGNLNNLSFLYLYNNQLSGSIPEEISYLRSLT 218

Query: 151 CLGLAENSLT-SLPDSLAN------------------------LQQLRVLDLRHNKLN-E 184
            L L++N+L  S+P SL N                        L+ L  LDL  N LN  
Sbjct: 219 ELDLSDNALNGSIPASLGNMNNLSFLFLYGNQLSGSIPEEICYLRSLTYLDLSENALNGS 278

Query: 185 LPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIR-ELPPELGELKNLV 242
           +P  +  L +L  L+L  N++    P+ I YL +L++L + +N +   +P  LG LKNL 
Sbjct: 279 IPASLGNLNNLSFLFLYGNQLSGSIPEEIGYLRSLNVLGLSENALNGSIPASLGNLKNLS 338

Query: 243 TLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE-S 299
            L+L +N L   +P  +GN   L  L L +N+L   IP  LGNL NL+ L L  N+L  S
Sbjct: 339 RLNLVNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSMLYLYNNQLSGS 398

Query: 300 VPETLSKCVHLNEFNVEGCALS-SLPD--GLLSSLTSINNITLSRNKFTAYPSGGPTQFT 356
           +P +L    +L+   +    LS S+P+  G LSSLT ++   LS N    +    P  F 
Sbjct: 399 IPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLSSLTYLD---LSNNSINGFI---PASFG 452

Query: 357 SVYSINF----EHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLG 411
           ++ ++ F    E+     +P  I    ++L+ +++ +N L  S+P   G    L+ LNL 
Sbjct: 453 NMSNLAFLFLYENQLASSVPEEI-GYLRSLNVLDLSENALNGSIPASFGNLNNLSRLNLV 511

Query: 412 TNQIS-KLSEDIQNLVNLEVLVLSNNLLK-KLPSSIGNLRKLKCLDLEENKLE-SLPNEI 468
            NQ+S  + E+I  L +L VL LS N L   +P+S GNL  L  L+L  N+L  S+P EI
Sbjct: 512 NNQLSGSIPEEIGYLRSLNVLDLSENALNGSIPASFGNLNNLSRLNLVNNQLSGSIPEEI 571

Query: 469 GFLKELQRLILQSNQL-VSLPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTLENLHTLYLN 526
           G+L+ L  L L  N L  S+P ++G+L NLS L +  N L  SIPEEIG L +L  L L 
Sbjct: 572 GYLRSLNDLGLSENALNGSIPASLGNLNNLSMLYLYNNQLSGSIPEEIGYLSSLTYLSLG 631

Query: 527 DNTCLNNIPFELALCSNLQIMSL-DNCPLSQIPSEI 561
           +N+    IP       NLQ + L DN  + +IPS +
Sbjct: 632 NNSLNGLIPASFGNMRNLQALILNDNNLIGEIPSSV 667



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 148/436 (33%), Positives = 230/436 (52%), Gaps = 44/436 (10%)

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT-SLPDSLANLQQLRVLD 176
           PS+E L  L +  +YG    ++P +IG +TNL  L L  N ++ ++P  +  L +L+++ 
Sbjct: 95  PSLENL-DLSKNNIYG----TIPPEIGNLTNLVYLDLNNNQISGTIPPQIGLLAKLQIIR 149

Query: 177 LRHNKLNE-LPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSMLSMRDNKIR-ELPP 233
           + HN+LN  +P  +  L SL  L L  N +    P  +  L+NLS L + +N++   +P 
Sbjct: 150 IFHNQLNGFIPKEIGYLRSLTKLSLGINFLSGSIPASVGNLNNLSFLYLYNNQLSGSIPE 209

Query: 234 ELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLR 291
           E+  L++L  LDL+ N L   +P  +GN   L  L L  N+L   IP+ +  L +LT L 
Sbjct: 210 EISYLRSLTELDLSDNALNGSIPASLGNMNNLSFLFLYGNQLSGSIPEEICYLRSLTYLD 269

Query: 292 LSYNRLE-SVPETLSKCVHLNEFNVEGCALS-SLPDGLLSSLTSINNITLSRNKFTAYPS 349
           LS N L  S+P +L    +L+   + G  LS S+P+  +  L S+N + LS N       
Sbjct: 270 LSENALNGSIPASLGNLNNLSFLFLYGNQLSGSIPEE-IGYLRSLNVLGLSENALNG--- 325

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTEL 408
                                IP  +    KNLS++N+ +N L+ S+P  LG    L+ L
Sbjct: 326 --------------------SIPASL-GNLKNLSRLNLVNNQLSGSIPASLGNLNNLSML 364

Query: 409 NLGTNQIS-KLSEDIQNLVNLEVLVLSNNLLK-KLPSSIGNLRKLKCLDLEENKLE-SLP 465
            L  NQ+S  +   + NL NL +L L NN L   +P+S+GNL  L  L L  N+L  S+P
Sbjct: 365 YLYNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSRLYLYNNQLSGSIP 424

Query: 466 NEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNL-QSIPEEIGTLENLHTL 523
            EIG+L  L  L L +N +   +P + G+++NL++L + EN L  S+PEEIG L +L+ L
Sbjct: 425 EEIGYLSSLTYLDLSNNSINGFIPASFGNMSNLAFLFLYENQLASSVPEEIGYLRSLNVL 484

Query: 524 YLNDNTCLNNIPFELA 539
            L++N    +IP    
Sbjct: 485 DLSENALNGSIPASFG 500



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 119/339 (35%), Positives = 181/339 (53%), Gaps = 13/339 (3%)

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDML 281
           ++N    +PPE+G L NLV LDL +N +   +P +IG    L  + + HN+L   IP  +
Sbjct: 104 KNNIYGTIPPEIGNLTNLVYLDLNNNQISGTIPPQIGLLAKLQIIRIFHNQLNGFIPKEI 163

Query: 282 GNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALS-SLPDGLLSSLTSINNITL 339
           G L +LT+L L  N L  S+P ++    +L+   +    LS S+P+  +S L S+  + L
Sbjct: 164 GYLRSLTKLSLGINFLSGSIPASVGNLNNLSFLYLYNNQLSGSIPEE-ISYLRSLTELDL 222

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLLT-SLPL 397
           S N              ++  +    NQ+   IP  I    ++L+ +++ +N L  S+P 
Sbjct: 223 SDNALNGSIPASLGNMNNLSFLFLYGNQLSGSIPEEI-CYLRSLTYLDLSENALNGSIPA 281

Query: 398 DLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVLSNNLLK-KLPSSIGNLRKLKCLD 455
            LG    L+ L L  NQ+S  + E+I  L +L VL LS N L   +P+S+GNL+ L  L+
Sbjct: 282 SLGNLNNLSFLFLYGNQLSGSIPEEIGYLRSLNVLGLSENALNGSIPASLGNLKNLSRLN 341

Query: 456 LEENKLE-SLPNEIGFLKELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGENNLQ-SIPE 512
           L  N+L  S+P  +G L  L  L L +NQL  S+P ++G+L NLS L +  N L  SIP 
Sbjct: 342 LVNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPA 401

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
            +G L NL  LYL +N    +IP E+   S+L  + L N
Sbjct: 402 SLGNLNNLSRLYLYNNQLSGSIPEEIGYLSSLTYLDLSN 440



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 222/471 (47%), Gaps = 62/471 (13%)

Query: 137 ASLPSQIGYVTNLTCLGLAENSLT-------------------------SLPDSLANLQQ 171
            S+P +IGY+ +L  L L+EN+L                          S+P+ +  L+ 
Sbjct: 517 GSIPEEIGYLRSLNVLDLSENALNGSIPASFGNLNNLSRLNLVNNQLSGSIPEEIGYLRS 576

Query: 172 LRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIR 229
           L  L L  N LN  +P  +  L +L +LYL  N++    P+ I YLS+L+ LS+ +N + 
Sbjct: 577 LNDLGLSENALNGSIPASLGNLNNLSMLYLYNNQLSGSIPEEIGYLSSLTYLSLGNNSLN 636

Query: 230 EL-PPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLIN 286
            L P   G ++NL  L L  N+L  E+P  + N T L  L +  N L   +P  LGN+ N
Sbjct: 637 GLIPASFGNMRNLQALILNDNNLIGEIPSSVCNLTSLEVLYMPRNNLKGKVPQCLGNISN 696

Query: 287 LTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           L  L +S N     +P ++S    L   +     L         +++S+    +  NK +
Sbjct: 697 LQVLSMSSNSFSGELPSSISNLTSLQILDFGRNNLEGAIPQCFGNISSLEVFDMQNNKLS 756

Query: 346 AYPSGGPTQFT---SVYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLG 400
                 PT F+   S+ S+N   N++ D+IP  +    K L  +++ DN L  + P+ LG
Sbjct: 757 GTL---PTNFSIGCSLISLNLHGNELEDEIPRSL-DNCKKLQVLDLGDNQLNDTFPMWLG 812

Query: 401 TWVGLTELNLGTNQIS---KLSEDIQNLVNLEVLVLSNNLLKK-LPSSIG-NLRKLKCLD 455
           T   L  L L +N++    + S       +L ++ LS N   + LP+S+  +L+ ++ +D
Sbjct: 813 TLPELRVLRLTSNKLHGPIRSSRAEIMFPDLRIIDLSRNAFSQDLPTSLFEHLKGMRTVD 872

Query: 456 --LEENKLESLPNEI------GFLKELQRLI-------LQSNQLVS-LPRAIGHLTNLSY 499
             +EE   ES  ++       G   E+ R++       L SN+    +P  +G L  +  
Sbjct: 873 KTMEEPSYESYYDDSVVVVTKGLELEIVRILSLYTVIDLSSNKFEGHIPSVLGDLIAIRI 932

Query: 500 LSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
           L+V  N LQ  IP  +G+L  L +L L+ N     IP +LA  + L+ ++L
Sbjct: 933 LNVSHNALQGYIPSSLGSLSILESLDLSFNQLSGEIPQQLASLTFLEFLNL 983



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 67/143 (46%), Gaps = 25/143 (17%)

Query: 422 IQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLIL 479
             +L +LE L LS NN+   +P  IGNL  L  LDL  N++  ++P +IG L +LQ + +
Sbjct: 91  FSSLPSLENLDLSKNNIYGTIPPEIGNLTNLVYLDLNNNQISGTIPPQIGLLAKLQIIRI 150

Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
             NQL                         IP+EIG L +L  L L  N    +IP  + 
Sbjct: 151 FHNQLNGF----------------------IPKEIGYLRSLTKLSLGINFLSGSIPASVG 188

Query: 540 LCSNLQIMSLDNCPLS-QIPSEI 561
             +NL  + L N  LS  IP EI
Sbjct: 189 NLNNLSFLYLYNNQLSGSIPEEI 211


>gi|308504609|ref|XP_003114488.1| CRE-LET-413 protein [Caenorhabditis remanei]
 gi|308261873|gb|EFP05826.1| CRE-LET-413 protein [Caenorhabditis remanei]
          Length = 772

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 198/398 (49%), Gaps = 27/398 (6%)

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +A  +Q+  LD   + L  +P  +++   L+ L L  N IK +   +  L +L +L + D
Sbjct: 9   MACQRQVDSLDRSQSNLQSVPTDIFRFRKLEDLNLTMNNIKELDRRLFTLRHLRILDVSD 68

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LPP++G+L  L+ L+L  N + ++P+ + NC  L  L+L  N    +P+ +    
Sbjct: 69  NEVSVLPPDIGQLTQLIELNLNRNTITDIPETLKNCKFLTNLNLNGNPFTRLPESICECS 128

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           ++T L L+   L S+P  +   V+L         L ++P  ++  L  +  + L +N+  
Sbjct: 129 SITILSLNDTTLTSLPANIGSLVNLRVLEARENHLKTIPLSIV-ELKQLEELDLGQNEIE 187

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P+    + TS+     + N +  +P  I S  + L ++++ +N +  LP +LG+   L
Sbjct: 188 DLPA-KIGKLTSLREFYADMNNLGTLPDSI-SDCRMLDQLDVSENQINRLPENLGSMSSL 245

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
           T+LN+  N I                        +LP SIGNL++L+ L +E N L  L 
Sbjct: 246 TDLNVSMNDI-----------------------PELPRSIGNLKRLQMLKVERNNLTQLT 282

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            EIG    L  L L  N L  LP +IG L NL+ L+V  NNL  IPE IG+ ++L  L L
Sbjct: 283 PEIGHCSALTELYLGQNMLTDLPDSIGDLKNLTTLNVDCNNLIEIPETIGSCKSLTVLSL 342

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVV 563
             N  ++ +P  +  C N+ ++ + +  L+ +P  + V
Sbjct: 343 RQN-LISELPMTIGKCENMTVLDVASNKLTSLPFTVKV 379



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 203/415 (48%), Gaps = 27/415 (6%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLA 155
           + C+ + + +LD S+S++  +P  + +   LE+L L  N +  L  ++  + +L  L ++
Sbjct: 9   MACQRQ-VDSLDRSQSNLQSVPTDIFRFRKLEDLNLTMNNIKELDRRLFTLRHLRILDVS 67

Query: 156 ENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYL 215
           +N ++ LP  +  L QL  L+L  N + ++P  +     L  L L  N    +   I   
Sbjct: 68  DNEVSVLPPDIGQLTQLIELNLNRNTITDIPETLKNCKFLTNLNLNGNPFTRLPESICEC 127

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
           S++++LS+ D  +  LP  +G L NL  L+   NHL+ +P  I     L  LDL  NE+ 
Sbjct: 128 SSITILSLNDTTLTSLPANIGSLVNLRVLEARENHLKTIPLSIVELKQLEELDLGQNEIE 187

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           ++P  +G L +L       N L ++P+++S C  L++ +V    ++ LP+ L S      
Sbjct: 188 DLPAKIGKLTSLREFYADMNNLGTLPDSISDCRMLDQLDVSENQINRLPENLGS------ 241

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
                               +S+  +N   N I ++P  I    K L  + ++ N LT L
Sbjct: 242 -------------------MSSLTDLNVSMNDIPELPRSI-GNLKRLQMLKVERNNLTQL 281

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
             ++G    LTEL LG N ++ L + I +L NL  L +  N L ++P +IG+ + L  L 
Sbjct: 282 TPEIGHCSALTELYLGQNMLTDLPDSIGDLKNLTTLNVDCNNLIEIPETIGSCKSLTVLS 341

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L +N +  LP  IG  + +  L + SN+L SLP  +  L  L  L + EN  QSI
Sbjct: 342 LRQNLISELPMTIGKCENMTVLDVASNKLTSLPFTVKVLYKLQALWLSENQTQSI 396



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 189/377 (50%), Gaps = 3/377 (0%)

Query: 152 LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD 211
           L  ++++L S+P  +   ++L  L+L  N + EL   ++ L  L+IL +  N +  + PD
Sbjct: 18  LDRSQSNLQSVPTDIFRFRKLEDLNLTMNNIKELDRRLFTLRHLRILDVSDNEVSVLPPD 77

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
           I  L+ L  L++  N I ++P  L   K L  L+L  N    LP+ I  C+ +  L L  
Sbjct: 78  IGQLTQLIELNLNRNTITDIPETLKNCKFLTNLNLNGNPFTRLPESICECSSITILSLND 137

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
             L ++P  +G+L+NL  L    N L+++P ++ +   L E ++    +  LP   +  L
Sbjct: 138 TTLTSLPANIGSLVNLRVLEARENHLKTIPLSIVELKQLEELDLGQNEIEDLP-AKIGKL 196

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
           TS+       N     P    +    +  ++   NQI+++P  + S + +L+ +N+  N 
Sbjct: 197 TSLREFYADMNNLGTLPDS-ISDCRMLDQLDVSENQINRLPENLGSMS-SLTDLNVSMND 254

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           +  LP  +G    L  L +  N +++L+ +I +   L  L L  N+L  LP SIG+L+ L
Sbjct: 255 IPELPRSIGNLKRLQMLKVERNNLTQLTPEIGHCSALTELYLGQNMLTDLPDSIGDLKNL 314

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
             L+++ N L  +P  IG  K L  L L+ N +  LP  IG   N++ L V  N L S+P
Sbjct: 315 TTLNVDCNNLIEIPETIGSCKSLTVLSLRQNLISELPMTIGKCENMTVLDVASNKLTSLP 374

Query: 512 EEIGTLENLHTLYLNDN 528
             +  L  L  L+L++N
Sbjct: 375 FTVKVLYKLQALWLSEN 391



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 81/152 (53%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +L++S + I  LP S+  L  L+ L +  N L  L  +IG+ + LT L L +N LT LPD
Sbjct: 247 DLNVSMNDIPELPRSIGNLKRLQMLKVERNNLTQLTPEIGHCSALTELYLGQNMLTDLPD 306

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
           S+ +L+ L  L++  N L E+P  +    SL +L LR N I  +   I    N+++L + 
Sbjct: 307 SIGDLKNLTTLNVDCNNLIEIPETIGSCKSLTVLSLRQNLISELPMTIGKCENMTVLDVA 366

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPK 256
            NK+  LP  +  L  L  L L+ N  + + K
Sbjct: 367 SNKLTSLPFTVKVLYKLQALWLSENQTQSILK 398


>gi|28302239|gb|AAH46591.1| Lrrc1 protein, partial [Mus musculus]
          Length = 596

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 195/390 (50%), Gaps = 28/390 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + +  +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I
Sbjct: 84  RHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 143

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LPPE+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT
Sbjct: 144 QRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLT 203

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L ++   L+S+PE +    +L    +    L+ LPD L                     
Sbjct: 204 CLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL--------------------- 242

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
               TQ   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L
Sbjct: 243 ----TQLRRLEELDLGNNEIYNLPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCL 297

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L L++N+L  LP  I
Sbjct: 298 DVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAI 357

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + L  L+L  N+L++LP++IG L  LS L+   N L S+P+EIG   +L    + DN
Sbjct: 358 GDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTMFCIRDN 417

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L  +P E++    L ++ +    L  +P
Sbjct: 418 R-LTRLPAEVSQAVELHVLDVAGNRLHHLP 446



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 211/454 (46%), Gaps = 28/454 (6%)

Query: 110 KSSITHLPPSVEKLTHLEELYLYGNKLASLPSQI-GYVTNLTCLGLAENSLTSLPDSLAN 168
           ++++ H  P      H+E +      L  +P +I  Y  +L  L L  N L  LP+    
Sbjct: 70  EAAMFHCIPLWRCNRHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQ 129

Query: 169 LQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           L +LR L L  N++  LP  +     L  L +  N I  +   I +   L +     N +
Sbjct: 130 LVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPL 189

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LP    EL+NL  L +    L+ LP+ IGN   L +L+L+ N L  +PD L  L  L 
Sbjct: 190 TRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLE 249

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L  N + ++PE++   +HL +  ++G  LS LP         I N+           
Sbjct: 250 ELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQ-------EIGNLK---------- 292

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                   ++  ++   N+++++P  I S   +L+ + +  NLL ++P  +G    L+ L
Sbjct: 293 --------NLLCLDVSENRLERLPEEI-SGLTSLTYLVISQNLLETIPEGIGKLKKLSIL 343

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
            L  N++++L E I +  NL  LVL+ N L  LP SIG L+KL  L+ + NKL SLP EI
Sbjct: 344 KLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 403

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G    L    ++ N+L  LP  +     L  L V  N L  +P  + TL+ L  L+L+DN
Sbjct: 404 GGCCSLTMFCIRDNRLTRLPAEVSQAVELHVLDVAGNRLHHLPLSLTTLK-LKALWLSDN 462

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
                + F+  +        L    L Q+PSE +
Sbjct: 463 QSQPLLTFQTDIDRATGEKILTCVLLPQMPSEPI 496



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 193/395 (48%), Gaps = 31/395 (7%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++  +D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 79  LWRCNR-HVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLG 137

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFN---RIKTVHP 210
           L++N +  LP  +AN  QL  LD+  N + E+P  +    +L++     N   R+    P
Sbjct: 138 LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFP 197

Query: 211 DIQYLS--------------------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
           ++Q L+                    NL+ L +R+N +  LP  L +L+ L  LDL +N 
Sbjct: 198 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 257

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           +  LP+ IG    L  L L  N+L  +P  +GNL NL  L +S NRLE +PE +S    L
Sbjct: 258 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 317

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQID 369
               +    L ++P+G +  L  ++ + L +N+ T  P   G  +  ++  +    N++ 
Sbjct: 318 TYLVISQNLLETIPEG-IGKLKKLSILKLDQNRLTQLPEAIGDCE--NLTELVLTENRLL 374

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
            +P  I  + K LS +N   N L SLP ++G    LT   +  N++++L  ++   V L 
Sbjct: 375 TLPKSI-GKLKKLSNLNADRNKLVSLPKEIGGCCSLTMFCIRDNRLTRLPAEVSQAVELH 433

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           VL ++ N L  LP S+  L KLK L L +N+ + L
Sbjct: 434 VLDVAGNRLHHLPLSLTTL-KLKALWLSDNQSQPL 467



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 119/346 (34%), Positives = 178/346 (51%), Gaps = 13/346 (3%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 156 LVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 215

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 216 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 275

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IP+ +G
Sbjct: 276 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIG 335

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L+L  NRL  +PE +  C +L E  +    L +LP   +  L  ++N+   RN
Sbjct: 336 KLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKS-IGKLKKLSNLNADRN 394

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T ++ I    N++ ++P  + S+A  L  +++  N L  LPL L 
Sbjct: 395 KLVSLPKEIGGCCSLT-MFCI--RDNRLTRLPAEV-SQAVELHVLDVAGNRLHHLPLSLT 450

Query: 401 TWVGLTELNLGTNQISKL---SEDIQNLVNLEVLVLSNNLLKKLPS 443
           T + L  L L  NQ   L     DI      ++L     LL ++PS
Sbjct: 451 T-LKLKALWLSDNQSQPLLTFQTDIDRATGEKILTCV--LLPQMPS 493


>gi|60360214|dbj|BAD90351.1| mKIAA4018 protein [Mus musculus]
          Length = 606

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 195/390 (50%), Gaps = 28/390 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + +  +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I
Sbjct: 94  RHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 153

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LPPE+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT
Sbjct: 154 QRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLT 213

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L ++   L+S+PE +    +L    +    L+ LPD L                     
Sbjct: 214 CLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL--------------------- 252

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
               TQ   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L
Sbjct: 253 ----TQLRRLEELDLGNNEIYNLPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCL 307

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L L++N+L  LP  I
Sbjct: 308 DVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAI 367

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + L  L+L  N+L++LP++IG L  LS L+   N L S+P+EIG   +L    + DN
Sbjct: 368 GDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTMFCIRDN 427

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L  +P E++    L ++ +    L  +P
Sbjct: 428 R-LTRLPAEVSQAVELHVLDVAGNRLHHLP 456



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 211/454 (46%), Gaps = 28/454 (6%)

Query: 110 KSSITHLPPSVEKLTHLEELYLYGNKLASLPSQI-GYVTNLTCLGLAENSLTSLPDSLAN 168
           ++++ H  P      H+E +      L  +P +I  Y  +L  L L  N L  LP+    
Sbjct: 80  EAAMFHCIPLWRCNRHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQ 139

Query: 169 LQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           L +LR L L  N++  LP  +     L  L +  N I  +   I +   L +     N +
Sbjct: 140 LVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPL 199

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LP    EL+NL  L +    L+ LP+ IGN   L +L+L+ N L  +PD L  L  L 
Sbjct: 200 TRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLE 259

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L  N + ++PE++   +HL +  ++G  LS LP         I N+           
Sbjct: 260 ELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQ-------EIGNLK---------- 302

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                   ++  ++   N+++++P  I S   +L+ + +  NLL ++P  +G    L+ L
Sbjct: 303 --------NLLCLDVSENRLERLPEEI-SGLTSLTYLVISQNLLETIPEGIGKLKKLSIL 353

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
            L  N++++L E I +  NL  LVL+ N L  LP SIG L+KL  L+ + NKL SLP EI
Sbjct: 354 KLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 413

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G    L    ++ N+L  LP  +     L  L V  N L  +P  + TL+ L  L+L+DN
Sbjct: 414 GGCCSLTMFCIRDNRLTRLPAEVSQAVELHVLDVAGNRLHHLPLSLTTLK-LKALWLSDN 472

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
                + F+  +        L    L Q+PSE +
Sbjct: 473 QSQPLLTFQTDIDRATGEKILTCVLLPQMPSEPI 506



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 193/395 (48%), Gaps = 31/395 (7%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++  +D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 89  LWRCNR-HVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLG 147

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFN---RIKTVHP 210
           L++N +  LP  +AN  QL  LD+  N + E+P  +    +L++     N   R+    P
Sbjct: 148 LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFP 207

Query: 211 DIQYLS--------------------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
           ++Q L+                    NL+ L +R+N +  LP  L +L+ L  LDL +N 
Sbjct: 208 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 267

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           +  LP+ IG    L  L L  N+L  +P  +GNL NL  L +S NRLE +PE +S    L
Sbjct: 268 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 327

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQID 369
               +    L ++P+G +  L  ++ + L +N+ T  P   G  +  ++  +    N++ 
Sbjct: 328 TYLVISQNLLETIPEG-IGKLKKLSILKLDQNRLTQLPEAIGDCE--NLTELVLTENRLL 384

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
            +P  I  + K LS +N   N L SLP ++G    LT   +  N++++L  ++   V L 
Sbjct: 385 TLPKSI-GKLKKLSNLNADRNKLVSLPKEIGGCCSLTMFCIRDNRLTRLPAEVSQAVELH 443

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           VL ++ N L  LP S+  L KLK L L +N+ + L
Sbjct: 444 VLDVAGNRLHHLPLSLTTL-KLKALWLSDNQSQPL 477



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 119/346 (34%), Positives = 178/346 (51%), Gaps = 13/346 (3%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 166 LVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 225

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 226 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 285

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IP+ +G
Sbjct: 286 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIG 345

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L+L  NRL  +PE +  C +L E  +    L +LP   +  L  ++N+   RN
Sbjct: 346 KLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKS-IGKLKKLSNLNADRN 404

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T ++ I    N++ ++P  + S+A  L  +++  N L  LPL L 
Sbjct: 405 KLVSLPKEIGGCCSLT-MFCI--RDNRLTRLPAEV-SQAVELHVLDVAGNRLHHLPLSLT 460

Query: 401 TWVGLTELNLGTNQISKL---SEDIQNLVNLEVLVLSNNLLKKLPS 443
           T + L  L L  NQ   L     DI      ++L     LL ++PS
Sbjct: 461 T-LKLKALWLSDNQSQPLLTFQTDIDRATGEKILTCV--LLPQMPS 503


>gi|60327198|gb|AAX19022.1| Hcr2-p1.2 [Solanum pimpinellifolium]
          Length = 991

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 153/451 (33%), Positives = 232/451 (51%), Gaps = 43/451 (9%)

Query: 102 NILNLDLSKSSITH-LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSL 159
           N++ LDL+ + I+  +PP +  L  L+ + ++ N L   +P +IGY+ +LT L L  N L
Sbjct: 120 NLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNNHLNGFIPEEIGYLRSLTKLSLGINFL 179

Query: 160 T-SLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIK-TVHPDIQYLS 216
           + S+P SL NL  L  L L +N+L   +P  +  L SL  L L  N +  ++   +  L+
Sbjct: 180 SGSIPASLGNLNNLSSLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIRASLGDLN 239

Query: 217 NLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNEL 274
           NLS L +  N++   +P E+G L++L  L L  N L   +P  +GN   L  LDL +N+L
Sbjct: 240 NLSSLYLYHNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSRLDLYNNKL 299

Query: 275 VN-IPDMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALS-SLPD--GLLS 329
              IP+ +G L +LT L L  N L  S+P +L    +L    +    LS S+P+  G L 
Sbjct: 300 SGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLR 359

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
           SLT +   +L  N  +        +  + +S++  +NQ+                     
Sbjct: 360 SLTKL---SLGNNFLSGSIPASLGKLNNFFSMHLFNNQLSG------------------- 397

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQI-SKLSEDIQNLVNLEVLVLSNNLLK-KLPSSIGN 447
               S+P ++G    LT L+L  N +   +   + NL NL +L L NN L   +P  IG 
Sbjct: 398 ----SIPEEIGYLRSLTYLDLSENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGY 453

Query: 448 LRKLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGEN 505
           LR L  LDL+EN L  S+P  +G L  L RL L +NQL  S+P  IG+L++L+ L +G N
Sbjct: 454 LRSLTYLDLKENALNGSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLSSLTNLYLGNN 513

Query: 506 NLQS-IPEEIGTLENLHTLYLNDNTCLNNIP 535
           +L   IP   G + NL  L+LNDN  +  IP
Sbjct: 514 SLNGLIPASFGNMRNLQALFLNDNNLIGEIP 544



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 174/559 (31%), Positives = 266/559 (47%), Gaps = 76/559 (13%)

Query: 92  EKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLT 150
           E  +LR   +  L ++    SI   P S+  L +L  LYLY N+L  S+P +IGY+ +LT
Sbjct: 162 EIGYLRSLTKLSLGINFLSGSI---PASLGNLNNLSSLYLYNNQLSGSIPEEIGYLRSLT 218

Query: 151 CLGLAENSLT-SLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTV 208
            L L  N L+ S+  SL +L  L  L L HN+L   +P  +  L SL  L L  N +   
Sbjct: 219 KLSLGINFLSGSIRASLGDLNNLSSLYLYHNQLSGSIPEEIGYLRSLTKLSLGINFLSGS 278

Query: 209 HP-DIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLV 265
            P  +  L+NLS L + +NK+   +P E+G L++L  LDL  N L   +P  +GN   L 
Sbjct: 279 IPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLF 338

Query: 266 TLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALS-S 322
            L L +N+L   IP+ +G L +LT+L L  N L  S+P +L K  +    ++    LS S
Sbjct: 339 MLYLYNNQLSGSIPEEIGYLRSLTKLSLGNNFLSGSIPASLGKLNNFFSMHLFNNQLSGS 398

Query: 323 LPD--GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID-KIPYGIFSRA 379
           +P+  G L SLT ++   LS N              +++ +   +NQ+   IP  I    
Sbjct: 399 IPEEIGYLRSLTYLD---LSENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEI-GYL 454

Query: 380 KNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVLSNNL 437
           ++L+ +++K+N L  S+P  LG    L+ L L  NQ+S  + E+I  L +L  L L NN 
Sbjct: 455 RSLTYLDLKENALNGSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLSSLTNLYLGNNS 514

Query: 438 LKKL-PSSIGNLRKLKCLDLEENKL-------------------------ESLPNEIGFL 471
           L  L P+S GN+R L+ L L +N L                           +P  +G +
Sbjct: 515 LNGLIPASFGNMRNLQALFLNDNNLIGEIPSFVCNLTSLELLYMPRNNLKGKVPQCLGNI 574

Query: 472 KELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTLENLH-------- 521
            +L  L + SN     LP +I +LT+L  L  G NNL+ +IP+  G + +L         
Sbjct: 575 SDLLVLSMSSNSFSGELPSSISNLTSLKILDFGRNNLEGAIPQCFGNISSLQVFDMQNNK 634

Query: 522 ----------------TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGG 565
                           +L L+ N   + IP+ L  C  LQ++ L +  L+      +   
Sbjct: 635 LSGTLPTNFSIGCSLISLNLHGNELEDEIPWSLDNCKKLQVLDLGDNQLNDTFPMWLGTL 694

Query: 566 PSLIIRYL---KMQGPYRT 581
           P L +  L   K+ GP R+
Sbjct: 695 PELRVLRLTSNKLHGPIRS 713



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 146/497 (29%), Positives = 246/497 (49%), Gaps = 72/497 (14%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLT-SLPDSLANL---- 169
           +P S+ KL +   ++L+ N+L  S+P +IGY+ +LT L L+EN+L  S+P SL NL    
Sbjct: 375 IPASLGKLNNFFSMHLFNNQLSGSIPEEIGYLRSLTYLDLSENALNGSIPASLGNLNNLF 434

Query: 170 --------------------QQLRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTV 208
                               + L  LDL+ N LN  +P  +  L +L  LYL  N++   
Sbjct: 435 MLYLYNNQLSGSIPEEIGYLRSLTYLDLKENALNGSIPASLGNLNNLSRLYLYNNQLSGS 494

Query: 209 HPD-IQYLSNLSMLSMRDNKIREL-PPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLV 265
            P+ I YLS+L+ L + +N +  L P   G ++NL  L L  N+L  E+P  + N T L 
Sbjct: 495 IPEEIGYLSSLTNLYLGNNSLNGLIPASFGNMRNLQALFLNDNNLIGEIPSFVCNLTSLE 554

Query: 266 TLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLES-VPETLS-----KCVHLNEFNVEGC 318
            L +  N L   +P  LGN+ +L  L +S N     +P ++S     K +     N+EG 
Sbjct: 555 LLYMPRNNLKGKVPQCLGNISDLLVLSMSSNSFSGELPSSISNLTSLKILDFGRNNLEG- 613

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFT---SVYSINFEHNQI-DKIPYG 374
              ++P     +++S+    +  NK +      PT F+   S+ S+N   N++ D+IP+ 
Sbjct: 614 ---AIPQ-CFGNISSLQVFDMQNNKLSGTL---PTNFSIGCSLISLNLHGNELEDEIPWS 666

Query: 375 IFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQISK--LSEDIQNLV-NLEV 430
           +    K L  +++ DN L  + P+ LGT   L  L L +N++     S  ++ +  +L +
Sbjct: 667 L-DNCKKLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNKLHGPIRSSGVEIMFPDLRI 725

Query: 431 LVLSNNLLKK-LPSSIG-NLRKLKCLD--LEENKLESLPNEI-----GFLKELQRLI--- 478
           + LS N   + LP+S+  +L+ ++ +D  +EE   E   + +     G   E+ R++   
Sbjct: 726 IDLSRNAFSQDLPTSLFEHLKGMRTVDKTMEEPSYEIYYDSVVVVTKGLELEIVRILSLY 785

Query: 479 ----LQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLN 532
               L SN+    +P  +G L  +  L+V  N LQ  IP  +G+L  L +L L+ N    
Sbjct: 786 TVIDLSSNKFEGHIPSVLGDLIAIRVLNVSHNALQGYIPSSLGSLSILESLDLSFNQLSG 845

Query: 533 NIPFELALCSNLQIMSL 549
            IP +LA  + L+ ++L
Sbjct: 846 EIPQQLASLTFLEFLNL 862



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 114/332 (34%), Positives = 161/332 (48%), Gaps = 60/332 (18%)

Query: 241 LVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE 298
           L  LDL++N++   +P EIGN T LV LDL  N++   IP  +G+L  L  +R+  N   
Sbjct: 97  LENLDLSNNNISVTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNN--- 153

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTAYPSGGPTQFT 356
                     HLN F         +P+  G L SLT ++                     
Sbjct: 154 ----------HLNGF---------IPEEIGYLRSLTKLS--------------------- 173

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQI 415
               INF    I            NLS + + +N L+ S+P ++G    LT+L+LG N +
Sbjct: 174 --LGINFLSGSIPAS----LGNLNNLSSLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFL 227

Query: 416 S-KLSEDIQNLVNLEVLVLSNNLLK-KLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLK 472
           S  +   + +L NL  L L +N L   +P  IG LR L  L L  N L  S+P  +G L 
Sbjct: 228 SGSIRASLGDLNNLSSLYLYHNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLN 287

Query: 473 ELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTLENLHTLYLNDNTC 530
            L RL L +N+L  S+P  IG+L +L+YL +GEN L  SIP  +G L NL  LYL +N  
Sbjct: 288 NLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQL 347

Query: 531 LNNIPFELALCSNLQIMSLDNCPLS-QIPSEI 561
             +IP E+    +L  +SL N  LS  IP+ +
Sbjct: 348 SGSIPEEIGYLRSLTKLSLGNNFLSGSIPASL 379


>gi|194743396|ref|XP_001954186.1| GF18150 [Drosophila ananassae]
 gi|190627223|gb|EDV42747.1| GF18150 [Drosophila ananassae]
          Length = 782

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 158/554 (28%), Positives = 247/554 (44%), Gaps = 68/554 (12%)

Query: 90  NIEKEFLRCKEENIL-------NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQ 142
           N+EK  L  KEE+         NLDLS +++THL   +E L  L  L L+ N L  LP +
Sbjct: 231 NLEK--LTMKEEDAWWNQVPLNNLDLSSNALTHLSSKIENLASLTVLTLHDNALVELPPE 288

Query: 143 IGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           IG +  L  L ++ N L+ LP  + +L  LR L++ +N+  EL   +  L  L+ L    
Sbjct: 289 IGKLEKLMRLNVSHNKLSHLPREIYSLPDLRHLNISYNEFKELDPDISDLHMLEFLDGGH 348

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N I+++   I +L  L+ L +  N I+ELPP+L  +++L  ++L  N L  LP ++G   
Sbjct: 349 NNIQSLPGGIGFLVRLTTLLLPYNHIKELPPDLVNMRSLQKIELEQNDLIGLPDDMGLLR 408

Query: 263 MLVTLDLQHNELVNIPDMLGN--------------------------------------- 283
            L  L LQHN+++ +PD  GN                                       
Sbjct: 409 KLECLYLQHNDILELPDFEGNESLNELHASNNFIKTIPKSMCSNLPHLKILDLRDNKITE 468

Query: 284 -------LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
                  L NLTRL +S N +  +P TLS   HL    V+G  + ++   +L   T+   
Sbjct: 469 LPDELCLLRNLTRLDVSNNSISVLPVTLSSLAHLISLQVDGNPIKTIRRDILQCGTTRIL 528

Query: 337 ITLSRNKFTAYPSGGPTQFT-----SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
            TL          GG    +     SV  +   H     IP     R K      +  NL
Sbjct: 529 KTLHERAMANKEEGGSDAASTSGGISVTRLRGGHTDTGDIPENFPDRYKLRHTRTLAVNL 588

Query: 392 --LTSLP---LDLGTWVGLTELNLGTNQISKLSEDIQNLV-NLEVLVLSNNLLKKLPSSI 445
             LT +P     L    G+  ++   NQ+S L   +Q++   L  LVLSNNL+  +P  I
Sbjct: 589 EQLTEVPEQVFQLAKEEGVHVVDFARNQLSTLPNGLQHMREQLTELVLSNNLIGHVPQFI 648

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
               ++  ++L  N L  LP E G L  L+ L + +N+   +P  I  L  L      EN
Sbjct: 649 SQFTRISYMNLSNNLLNDLPKEFGVLVTLRELNVANNRFQFIPNGIYELQGLEIFIASEN 708

Query: 506 NLQSI-PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVG 564
           +++ +    +  +  L TL L +N  ++N+P  L   +N+  + L   P  Q   +I++ 
Sbjct: 709 HIKQLNVSGLQCMPRLTTLDLRNND-IDNVPPILGNLTNITHLELVGNPFRQPRHQILMK 767

Query: 565 GPSLIIRYLKMQGP 578
           G   I+ YL+ + P
Sbjct: 768 GTEAIMSYLRDRIP 781


>gi|297728605|ref|NP_001176666.1| Os11g0628000 [Oryza sativa Japonica Group]
 gi|77552140|gb|ABA94937.1| Leucine Rich Repeat family protein [Oryza sativa Japonica Group]
 gi|255680288|dbj|BAH95394.1| Os11g0628000 [Oryza sativa Japonica Group]
          Length = 1105

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 166/506 (32%), Positives = 257/506 (50%), Gaps = 50/506 (9%)

Query: 103 ILNLDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLT 160
           ++ LDL   +IT  + P V  L+ +  +++ GN L   +  +IG +T+LT L L+ NSL+
Sbjct: 79  VVALDLESQNITGKIFPCVANLSFISRIHMPGNHLNGQISPEIGRLTHLTFLNLSMNSLS 138

Query: 161 S-LPDSLANLQQLRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIK-TVHPDIQYLSN 217
             +P+++++   L ++ L  N L+ E+P  + +   L+ + L  N I+ ++ P+I  LSN
Sbjct: 139 GEIPETISSCSHLEIVILHRNSLSGEIPRSLAQCLFLQQIILSNNHIQGSIPPEIGLLSN 198

Query: 218 LSMLSMRDNKIRELPPEL-GELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELV 275
           LS L +R+N++    P+L G  ++LV ++L +N L  E+P  + NCT +  +DL +N L 
Sbjct: 199 LSALFIRNNQLTGTIPQLLGSSRSLVWVNLQNNSLTGEIPNSLFNCTTISYIDLSYNGLS 258

Query: 276 N-------------------------IPDMLGNLINLTRLRLSYNRLE-SVPETLSKCVH 309
                                     IP ++ NL  L+ L L+ N LE ++P++LSK   
Sbjct: 259 GSIPPFSQTSSSLRYLSLTENHLSGVIPTLVDNLPLLSTLMLARNNLEGTIPDSLSKLSS 318

Query: 310 LNEFNVEGCALSS-LPDGL--LSSLTSINNITLSRNKFTA-YPSGGPTQFTSVYSINFEH 365
           L   ++    LS  +P GL  +S+LT +N      N+F    P+        + SI  E 
Sbjct: 319 LQTLDLSYNNLSGNVPLGLYAISNLTYLN---FGANQFVGRIPTNIGYTLPGLTSIILEG 375

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK----LSED 421
           NQ +       + A NL  +  + N    +   LG+   LT L+LG N++          
Sbjct: 376 NQFEGPIPASLANALNLQNIYFRRNSFDGVIPPLGSLSMLTYLDLGDNKLEAGDWTFMSS 435

Query: 422 IQNLVNLEVLVLS-NNLLKKLPSSIGNLRK-LKCLDLEENKLE-SLPNEIGFLKELQRLI 478
           + N   L+ L L  NNL   +PSSI NL + LK L L +NKL  S+P+EI  L  L  L 
Sbjct: 436 LTNCTQLQNLWLDRNNLQGIIPSSISNLSESLKVLILIQNKLTGSIPSEIEKLSSLSVLQ 495

Query: 479 LQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPF 536
           +  N L   +P  + +L NLS LS+  N L   IP  IG LE L  LYL DN     IP 
Sbjct: 496 MDRNFLSGQIPDTLVNLQNLSILSLSNNKLSGEIPRSIGKLEQLTKLYLQDNDLTGKIPS 555

Query: 537 ELALCSNLQIMSLDNCPLS-QIPSEI 561
            LA C+NL  ++L    LS  IPS++
Sbjct: 556 SLARCTNLAKLNLSRNYLSGSIPSKL 581



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 230/511 (45%), Gaps = 87/511 (17%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
           +PP +  L++L  L++  N+L  ++P  +G   +L  + L  NSLT  +P+SL N   + 
Sbjct: 189 IPPEIGLLSNLSALFIRNNQLTGTIPQLLGSSRSLVWVNLQNNSLTGEIPNSLFNCTTIS 248

Query: 174 VLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS----MRDNKI 228
            +DL +N L+  +P      +SL+ L L  N +  V P +  + NL +LS     R+N  
Sbjct: 249 YIDLSYNGLSGSIPPFSQTSSSLRYLSLTENHLSGVIPTL--VDNLPLLSTLMLARNNLE 306

Query: 229 RELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLG-NLI 285
             +P  L +L +L TLDL++N+L   +P  +   + L  L+   N+ V  IP  +G  L 
Sbjct: 307 GTIPDSLSKLSSLQTLDLSYNNLSGNVPLGLYAISNLTYLNFGANQFVGRIPTNIGYTLP 366

Query: 286 NLTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT---LSR 341
            LT + L  N+ E  +P +L+  ++L        +     DG++  L S++ +T   L  
Sbjct: 367 GLTSIILEGNQFEGPIPASLANALNLQNIYFRRNSF----DGVIPPLGSLSMLTYLDLGD 422

Query: 342 NKFTAYPSGGPTQF-------TSVYSINFEHNQIDKI-PYGIFSRAKNLSKVNMKDNLLT 393
           NK  A    G   F       T + ++  + N +  I P  I + +++L  + +  N LT
Sbjct: 423 NKLEA----GDWTFMSSLTNCTQLQNLWLDRNNLQGIIPSSISNLSESLKVLILIQNKLT 478

Query: 394 -SLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVLSNNLLK-KLPSSIGNLRK 450
            S+P ++     L+ L +  N +S ++ + + NL NL +L LSNN L  ++P SIG L +
Sbjct: 479 GSIPSEIEKLSSLSVLQMDRNFLSGQIPDTLVNLQNLSILSLSNNKLSGEIPRSIGKLEQ 538

Query: 451 LKCLDLEENKLES----------------------------------------------- 463
           L  L L++N L                                                 
Sbjct: 539 LTKLYLQDNDLTGKIPSSLARCTNLAKLNLSRNYLSGSIPSKLFSISTLSEGLDISYNQL 598

Query: 464 ---LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTLE 518
              +P EIG L  L  L +  NQL   +P ++G    L  +S+  N LQ SIPE +  L 
Sbjct: 599 TGHIPLEIGRLINLNSLNISHNQLSGEIPSSLGQCLLLESISLESNFLQGSIPESLINLR 658

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
            +  + L+ N     IP       +L  ++L
Sbjct: 659 GITEMDLSQNNLSGEIPIYFETFGSLHTLNL 689



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 226/511 (44%), Gaps = 99/511 (19%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSL-TSL 162
           +DLS + ++  +PP  +  + L  L L  N L+  +P+ +  +  L+ L LA N+L  ++
Sbjct: 250 IDLSYNGLSGSIPPFSQTSSSLRYLSLTENHLSGVIPTLVDNLPLLSTLMLARNNLEGTI 309

Query: 163 PDSLANLQQLRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNR-IKTVHPDIQY------ 214
           PDSL+ L  L+ LDL +N L+  +P+ +Y +++L  L    N+ +  +  +I Y      
Sbjct: 310 PDSLSKLSSLQTLDLSYNNLSGNVPLGLYAISNLTYLNFGANQFVGRIPTNIGYTLPGLT 369

Query: 215 -------------------LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE-- 253
                                NL  +  R N    + P LG L  L  LDL  N LE   
Sbjct: 370 SIILEGNQFEGPIPASLANALNLQNIYFRRNSFDGVIPPLGSLSMLTYLDLGDNKLEAGD 429

Query: 254 --LPKEIGNCTMLVTLDLQHNELVNI-PDMLGNLI-NLTRLRLSYNRLE-SVPETLSKCV 308
                 + NCT L  L L  N L  I P  + NL  +L  L L  N+L  S+P  + K  
Sbjct: 430 WTFMSSLTNCTQLQNLWLDRNNLQGIIPSSISNLSESLKVLILIQNKLTGSIPSEIEKLS 489

Query: 309 HLNEFNVEGCALSS-LPDGLLSSLTSINNITLSRNKFTA---YPSGGPTQFTSVYSINFE 364
            L+   ++   LS  +PD L++ L +++ ++LS NK +       G   Q T +Y    +
Sbjct: 490 SLSVLQMDRNFLSGQIPDTLVN-LQNLSILSLSNNKLSGEIPRSIGKLEQLTKLY---LQ 545

Query: 365 HNQI-DKIPYGIFSRAKNLSKVNMKDNLLTS--------------------------LPL 397
            N +  KIP  + +R  NL+K+N+  N L+                           +PL
Sbjct: 546 DNDLTGKIPSSL-ARCTNLAKLNLSRNYLSGSIPSKLFSISTLSEGLDISYNQLTGHIPL 604

Query: 398 DLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVLSNNLLK-KLPSSIGNLRKLKCLD 455
           ++G  + L  LN+  NQ+S ++   +   + LE + L +N L+  +P S+ NLR +  +D
Sbjct: 605 EIGRLINLNSLNISHNQLSGEIPSSLGQCLLLESISLESNFLQGSIPESLINLRGITEMD 664

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L +N L     EI    E            SL     H  NLS+     NNL+    + G
Sbjct: 665 LSQNNLSG---EIPIYFE---------TFGSL-----HTLNLSF-----NNLEGPVPKGG 702

Query: 516 TLENLHTLYLNDNT--CLNNIPFELALCSNL 544
              NL+ +++  N   C  +    L LC +L
Sbjct: 703 VFANLNDVFMQGNKKLCGGSPMLHLPLCKDL 733


>gi|194882925|ref|XP_001975560.1| GG20492 [Drosophila erecta]
 gi|190658747|gb|EDV55960.1| GG20492 [Drosophila erecta]
          Length = 849

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 196/386 (50%), Gaps = 26/386 (6%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           LD  +  L + P V     +L+ LYL   R++ + P + Y   L +L +  N +  +P  
Sbjct: 22  LDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLESIPQA 81

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
           +G L+ L  LDL  N +  +P+EI +C  L  LDL  N L  +PD + +LI+L  L L+ 
Sbjct: 82  IGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELLLNE 141

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
             LE +P    + V+L    +    L +LP  ++  L ++  + +  N+FT  P     +
Sbjct: 142 TYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVR-LINLQRLDIGGNEFTELPEVV-GE 199

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW------------ 402
             S+  +  + NQI ++   I  + ++L       NLL +LP +L  W            
Sbjct: 200 LKSLRELWIDFNQIRRVSANI-GKLRDLQHFEANGNLLDTLPSELSNWRNVEVLSICSNS 258

Query: 403 -------VG----LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
                  VG    L      +N +++L + I  L  LE LVLS+N L +LPS+IG LR L
Sbjct: 259 LEAFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSL 318

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           + L  ++N+L  LP+E+   ++L  L + +NQL +LP+ IG+L+ +  L+V  N + ++P
Sbjct: 319 RFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVVNNYINALP 378

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFE 537
             +  L NL +++L+DN     +P +
Sbjct: 379 VSMLNLVNLTSMWLSDNQSQPLVPLQ 404



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 193/386 (50%), Gaps = 5/386 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           +EE I  LD S + +T  P   +    LEELYL   +L +LP Q+ Y   L  L +  N+
Sbjct: 15  REEVIDKLDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNN 74

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L S+P ++ +L+QL+ LDL  N +  +P  +     L  L L  N ++ +   I  L +L
Sbjct: 75  LESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISL 134

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L + +  +  LP   G L NL  L+L  N+L  LPK +     L  LD+  NE   +P
Sbjct: 135 QELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELP 194

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           +++G L +L  L + +N++  V   + K   L  F   G  L +LP   LS+  ++  ++
Sbjct: 195 EVVGELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPSE-LSNWRNVEVLS 253

Query: 339 LSRNKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
           +  N   A+P S G     S+ +   E N + ++P  I S  + L ++ +  N L  LP 
Sbjct: 254 ICSNSLEAFPFSVG--MLKSLVTFKCESNGLTELPDSI-SYLEQLEELVLSHNKLIRLPS 310

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
            +G    L  L    NQ+ +L +++ +   L VL ++NN L  LP +IGNL K+K L++ 
Sbjct: 311 TIGMLRSLRFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVV 370

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQ 483
            N + +LP  +  L  L  + L  NQ
Sbjct: 371 NNYINALPVSMLNLVNLTSMWLSDNQ 396



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 159/326 (48%), Gaps = 28/326 (8%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           +N+ +E   CK  ++ +LDLS +S+  LP ++  L  L+EL L    L  LP+  G + N
Sbjct: 99  VNVPEEIKSCK--HLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPANFGRLVN 156

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L L  N+L +LP S+  L  L+ LD+  N+  ELP VV +L SL+ L++ FN+I+ V
Sbjct: 157 LRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELPEVVGELKSLRELWIDFNQIRRV 216

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
             +I  L +L       N +  LP EL   +N+  L +  N LE  P  +G    LVT  
Sbjct: 217 SANIGKLRDLQHFEANGNLLDTLPSELSNWRNVEVLSICSNSLEAFPFSVGMLKSLVTFK 276

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
            + N L  +PD +  L  L  L LS+N+L  +P T+     L     +   L  LPD L 
Sbjct: 277 CESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPDELC 336

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           S                        Q  SV S+   +NQ+  +P  I + +K +  +N+ 
Sbjct: 337 S-----------------------CQQLSVLSV--ANNQLSALPQNIGNLSK-MKVLNVV 370

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQ 414
           +N + +LP+ +   V LT + L  NQ
Sbjct: 371 NNYINALPVSMLNLVNLTSMWLSDNQ 396



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 74/133 (55%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           ++++      + +T LP S+  L  LEEL L  NKL  LPS IG + +L  L   +N L 
Sbjct: 270 KSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLR 329

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LPD L + QQL VL + +N+L+ LP  +  L+ +K+L +  N I  +   +  L NL+ 
Sbjct: 330 QLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVNLTS 389

Query: 221 LSMRDNKIRELPP 233
           + + DN+ + L P
Sbjct: 390 MWLSDNQSQPLVP 402



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 1/158 (0%)

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           + +L+     ++   E  Q+   LE L LS   L+ LP  +   + L+ L +  N LES+
Sbjct: 19  IDKLDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLESI 78

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P  IG L++LQ L L  N +V++P  I    +L++L +  N+LQ +P+ I +L +L  L 
Sbjct: 79  PQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELL 138

Query: 525 LNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           LN+ T L  +P       NL+I+ L    L  +P  +V
Sbjct: 139 LNE-TYLEFLPANFGRLVNLRILELRLNNLMTLPKSMV 175



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 74/153 (48%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L +  +S+   P SV  L  L       N L  LP  I Y+  L  L L+ N L  
Sbjct: 248 NVEVLSICSNSLEAFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIR 307

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP ++  L+ LR L    N+L +LP  +     L +L +  N++  +  +I  LS + +L
Sbjct: 308 LPSTIGMLRSLRFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVL 367

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           ++ +N I  LP  +  L NL ++ L+ N  + L
Sbjct: 368 NVVNNYINALPVSMLNLVNLTSMWLSDNQSQPL 400


>gi|359683883|ref|ZP_09253884.1| lipoprotein, partial [Leptospira santarosai str. 2000030832]
          Length = 332

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/308 (36%), Positives = 167/308 (54%), Gaps = 26/308 (8%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++  LP E+G L+NL  L++ +N L  LP+EIG    L +L+L++N LV +P  
Sbjct: 2   LRLAYNQLTTLPEEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKE 61

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L  L  L L+ N+L ++P+ + K   L    +    L  LP  +   L ++  + L 
Sbjct: 62  IGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLTNNQLRILPQEI-GKLQNLKELILE 120

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
            N+  ++P                         G  S   NL +++++ N  T+LP ++G
Sbjct: 121 NNRLESFPK----------------------EIGTLS---NLQRLHLEYNRFTTLPKEIG 155

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
           T   L  LNL  NQ++ L ++I  L  LE L L NN L  LP  IG L+KL+ L L  N+
Sbjct: 156 TLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQ 215

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L +LP EIG L+ L+ L L  NQLV+LP  IG L  L +LS+  N L+++P+EIG L+NL
Sbjct: 216 LATLPQEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRTLPQEIGQLQNL 275

Query: 521 HTLYLNDN 528
             L L+ N
Sbjct: 276 KDLDLSGN 283



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 168/319 (52%), Gaps = 27/319 (8%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L LA+N L  LP+EIG    L  L++ +N+L+ +P  +G L NL  L L  NRL ++P+ 
Sbjct: 2   LRLAYNQLTTLPEEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKE 61

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           +     L    +    L++LP  +   L  +  + L+ N+    P               
Sbjct: 62  IGTLQKLEWLYLTNNQLATLPKEI-GKLQRLEWLGLTNNQLRILPQ-------------- 106

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
              +I K+        +NL ++ +++N L S P ++GT   L  L+L  N+ + L ++I 
Sbjct: 107 ---EIGKL--------QNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPKEIG 155

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
            L  L  L L +N L  LP  IG L +L+ L+L  N+L +LP EIG L++LQ L L +NQ
Sbjct: 156 TLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQ 215

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
           L +LP+ IG L NL  L + +N L ++PEEIGTL+ L  L L +N  L  +P E+    N
Sbjct: 216 LATLPQEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQ-LRTLPQEIGQLQN 274

Query: 544 LQIMSLDNCPLSQIPSEIV 562
           L+ + L   P +  P EIV
Sbjct: 275 LKDLDLSGNPFTTFPQEIV 293



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/249 (36%), Positives = 139/249 (55%), Gaps = 1/249 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L+L  + +  LP  +  L  LE LYL  N+LA+LP +IG +  L  LGL  N L 
Sbjct: 43  QNLQSLNLENNRLVTLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLTNNQLR 102

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  LQ L+ L L +N+L   P  +  L++L+ L+L +NR  T+  +I  L  L  
Sbjct: 103 ILPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPKEIGTLHRLPW 162

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  N++  LP E+G L+ L  L+L +N L  LPKEIG    L  L L +N+L  +P  
Sbjct: 163 LNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPQE 222

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LS N+L ++PE +     L   +++   L +LP   +  L ++ ++ LS
Sbjct: 223 IGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRTLPQE-IGQLQNLKDLDLS 281

Query: 341 RNKFTAYPS 349
            N FT +P 
Sbjct: 282 GNPFTTFPQ 290



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 158/294 (53%), Gaps = 3/294 (1%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L+ + +T LP  + +L +L++L ++ N+L +LP +IG + NL  L L  N L +LP  
Sbjct: 2   LRLAYNQLTTLPEEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKE 61

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ+L  L L +N+L  LP  + KL  L+ L L  N+++ +  +I  L NL  L + +
Sbjct: 62  IGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLTNNQLRILPQEIGKLQNLKELILEN 121

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++   P E+G L NL  L L +N    LPKEIG    L  L+L+HN+L  +P  +G L 
Sbjct: 122 NRLESFPKEIGTLSNLQRLHLEYNRFTTLPKEIGTLHRLPWLNLEHNQLTTLPQEIGRLE 181

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L  NRL ++P+ +     L    +    L++LP   +  L ++ ++ LS N+  
Sbjct: 182 RLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPQE-IGQLQNLKDLDLSDNQLV 240

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
             P    T    +  ++ ++NQ+  +P  I  + +NL  +++  N  T+ P ++
Sbjct: 241 TLPEEIGT-LQRLEWLSLKNNQLRTLPQEI-GQLQNLKDLDLSGNPFTTFPQEI 292



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 98/181 (54%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L L  + +   P  +  L++L+ L+L  N+  +LP +IG +  L  L L  N 
Sbjct: 110 KLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPKEIGTLHRLPWLNLEHNQ 169

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT+LP  +  L++L  L+L +N+L  LP  +  L  L+ LYL  N++ T+  +I  L NL
Sbjct: 170 LTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPQEIGQLQNL 229

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L + DN++  LP E+G L+ L  L L +N L  LP+EIG    L  LDL  N     P
Sbjct: 230 KDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRTLPQEIGQLQNLKDLDLSGNPFTTFP 289

Query: 279 D 279
            
Sbjct: 290 Q 290



 Score = 45.1 bits (105), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           YL +  N L ++PEEIG LENL  L + +N  +  +P E+    NLQ ++L+N  L  +P
Sbjct: 1   YLRLAYNQLTTLPEEIGRLENLQDLNVFNNQLI-TLPQEIGTLQNLQSLNLENNRLVTLP 59

Query: 559 SEI 561
            EI
Sbjct: 60  KEI 62


>gi|19922294|ref|NP_611007.1| Lap1, isoform A [Drosophila melanogaster]
 gi|320543977|ref|NP_001188938.1| Lap1, isoform B [Drosophila melanogaster]
 gi|51316545|sp|Q9V780.1|LAP1_DROME RecName: Full=Protein lap1
 gi|7303113|gb|AAF58179.1| Lap1, isoform A [Drosophila melanogaster]
 gi|40882491|gb|AAR96157.1| RE64484p [Drosophila melanogaster]
 gi|318068607|gb|ADV37184.1| Lap1, isoform B [Drosophila melanogaster]
          Length = 849

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 196/386 (50%), Gaps = 26/386 (6%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           LD  +  L + P V     +L+ LYL   R++ + P + Y   L +L +  N +  +P  
Sbjct: 22  LDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLESIPQA 81

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
           +G L+ L  LDL  N +  +P+EI +C  L  LDL  N L  +PD + +LI+L  L L+ 
Sbjct: 82  IGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELLLNE 141

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
             LE +P    + V+L    +    L +LP  ++  L ++  + +  N+FT  P     +
Sbjct: 142 TYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVR-LINLQRLDIGGNEFTELPEVV-GE 199

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW------------ 402
             S+  +  + NQI ++   I  + ++L       NLL +LP +L  W            
Sbjct: 200 LKSLRELWIDFNQIRRVSANI-GKLRDLQHFEANGNLLDTLPSELSNWRNVEVLSICSNS 258

Query: 403 -------VG----LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
                  VG    L      +N +++L + I  L  LE LVLS+N L +LPS+IG LR L
Sbjct: 259 LEAFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSL 318

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           + L  ++N+L  LP+E+   ++L  L + +NQL +LP+ IG+L+ +  L+V  N + ++P
Sbjct: 319 RFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVVNNYINALP 378

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFE 537
             +  L NL +++L+DN     +P +
Sbjct: 379 VSMLNLVNLTSMWLSDNQSQPLVPLQ 404



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 193/386 (50%), Gaps = 5/386 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           +EE I  LD S + +T  P   +    LEELYL   +L +LP Q+ Y   L  L +  N+
Sbjct: 15  REEVIDKLDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNN 74

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L S+P ++ +L+QL+ LDL  N +  +P  +     L  L L  N ++ +   I  L +L
Sbjct: 75  LESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISL 134

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L + +  +  LP   G L NL  L+L  N+L  LPK +     L  LD+  NE   +P
Sbjct: 135 QELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELP 194

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           +++G L +L  L + +N++  V   + K   L  F   G  L +LP   LS+  ++  ++
Sbjct: 195 EVVGELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPSE-LSNWRNVEVLS 253

Query: 339 LSRNKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
           +  N   A+P S G     S+ +   E N + ++P  I S  + L ++ +  N L  LP 
Sbjct: 254 ICSNSLEAFPFSVG--MLKSLVTFKCESNGLTELPDSI-SYLEQLEELVLSHNKLIRLPS 310

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
            +G    L  L    NQ+ +L +++ +   L VL ++NN L  LP +IGNL K+K L++ 
Sbjct: 311 TIGMLRSLRFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVV 370

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQ 483
            N + +LP  +  L  L  + L  NQ
Sbjct: 371 NNYINALPVSMLNLVNLTSMWLSDNQ 396



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 159/326 (48%), Gaps = 28/326 (8%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           +N+ +E   CK  ++ +LDLS +S+  LP ++  L  L+EL L    L  LP+  G + N
Sbjct: 99  VNVPEEIKSCK--HLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPANFGRLVN 156

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L L  N+L +LP S+  L  L+ LD+  N+  ELP VV +L SL+ L++ FN+I+ V
Sbjct: 157 LRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELPEVVGELKSLRELWIDFNQIRRV 216

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
             +I  L +L       N +  LP EL   +N+  L +  N LE  P  +G    LVT  
Sbjct: 217 SANIGKLRDLQHFEANGNLLDTLPSELSNWRNVEVLSICSNSLEAFPFSVGMLKSLVTFK 276

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
            + N L  +PD +  L  L  L LS+N+L  +P T+     L     +   L  LPD L 
Sbjct: 277 CESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPDELC 336

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           S                        Q  SV S+   +NQ+  +P  I + +K +  +N+ 
Sbjct: 337 S-----------------------CQQLSVLSV--ANNQLSALPQNIGNLSK-MKVLNVV 370

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQ 414
           +N + +LP+ +   V LT + L  NQ
Sbjct: 371 NNYINALPVSMLNLVNLTSMWLSDNQ 396



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 74/133 (55%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           ++++      + +T LP S+  L  LEEL L  NKL  LPS IG + +L  L   +N L 
Sbjct: 270 KSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLR 329

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LPD L + QQL VL + +N+L+ LP  +  L+ +K+L +  N I  +   +  L NL+ 
Sbjct: 330 QLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVNLTS 389

Query: 221 LSMRDNKIRELPP 233
           + + DN+ + L P
Sbjct: 390 MWLSDNQSQPLVP 402



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 1/158 (0%)

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           + +L+     ++   E  Q+   LE L LS   L+ LP  +   + L+ L +  N LES+
Sbjct: 19  IDKLDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLESI 78

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P  IG L++LQ L L  N +V++P  I    +L++L +  N+LQ +P+ I +L +L  L 
Sbjct: 79  PQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELL 138

Query: 525 LNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           LN+ T L  +P       NL+I+ L    L  +P  +V
Sbjct: 139 LNE-TYLEFLPANFGRLVNLRILELRLNNLMTLPKSMV 175



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 74/153 (48%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L +  +S+   P SV  L  L       N L  LP  I Y+  L  L L+ N L  
Sbjct: 248 NVEVLSICSNSLEAFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIR 307

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP ++  L+ LR L    N+L +LP  +     L +L +  N++  +  +I  LS + +L
Sbjct: 308 LPSTIGMLRSLRFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVL 367

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           ++ +N I  LP  +  L NL ++ L+ N  + L
Sbjct: 368 NVVNNYINALPVSMLNLVNLTSMWLSDNQSQPL 400


>gi|125810355|ref|XP_001361460.1| GA10197 [Drosophila pseudoobscura pseudoobscura]
 gi|54636635|gb|EAL26038.1| GA10197 [Drosophila pseudoobscura pseudoobscura]
          Length = 848

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 193/386 (50%), Gaps = 26/386 (6%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           LD  +  L + P V     +L+ LYL   R++++ P + Y   L +L +  N +  +P  
Sbjct: 22  LDYSNTPLTDFPEVWQHERTLEELYLSTTRLQSLPPQLFYCQGLRVLHVNSNNLESIPQA 81

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
           +G L+ L  LDL  N +  +P EI  C  L  LDL  N L  +PD + +LI+L  L L+ 
Sbjct: 82  IGSLRQLQNLDLNRNLIVNVPDEIKACKHLTRLDLSCNSLQRLPDAVTSLISLQELLLNE 141

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
             LE +P    + V+L    +    L +LP  ++  L ++  + +  N+FT  P     +
Sbjct: 142 TYLEFLPANFGRLVNLRILELRLNNLITLPKSMVR-LVNLQRLDIGGNEFTELPEVV-GE 199

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW------------ 402
             S+  +  + NQI ++   I  + + L       NLL +LP +L  W            
Sbjct: 200 LKSLRELWIDFNQIRRVSANI-GKLRELQHFEANGNLLDTLPSELSNWRNVEVLSICSNN 258

Query: 403 -------VG----LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
                  VG    L      +N +++L + I  L  LE LVLS+N L +LPS+IG LR L
Sbjct: 259 LEAFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSL 318

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           + L  +EN+L  LP+E+   ++L  L + +NQL +LP+ IG+L  L  ++V  N + ++P
Sbjct: 319 RFLFADENQLRQLPDELCSCQQLSVLSMANNQLSALPQNIGNLGKLKVINVVNNYINALP 378

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFE 537
             +  L NL +L+L+DN     +P +
Sbjct: 379 VSMLNLVNLTSLWLSDNQSQPLVPLQ 404



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 192/385 (49%), Gaps = 5/385 (1%)

Query: 100 EENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL 159
           EE I  LD S + +T  P   +    LEELYL   +L SLP Q+ Y   L  L +  N+L
Sbjct: 16  EEVIDKLDYSNTPLTDFPEVWQHERTLEELYLSTTRLQSLPPQLFYCQGLRVLHVNSNNL 75

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
            S+P ++ +L+QL+ LDL  N +  +P  +     L  L L  N ++ +   +  L +L 
Sbjct: 76  ESIPQAIGSLRQLQNLDLNRNLIVNVPDEIKACKHLTRLDLSCNSLQRLPDAVTSLISLQ 135

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L + +  +  LP   G L NL  L+L  N+L  LPK +     L  LD+  NE   +P+
Sbjct: 136 ELLLNETYLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTELPE 195

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
           ++G L +L  L + +N++  V   + K   L  F   G  L +LP   LS+  ++  +++
Sbjct: 196 VVGELKSLRELWIDFNQIRRVSANIGKLRELQHFEANGNLLDTLPSE-LSNWRNVEVLSI 254

Query: 340 SRNKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
             N   A+P S G     S+ +   E N + ++P  I S  + L ++ +  N L  LP  
Sbjct: 255 CSNNLEAFPFSVG--MLKSLVTFKCESNGLTELPDSI-SYLEQLEELVLSHNKLIRLPST 311

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +G    L  L    NQ+ +L +++ +   L VL ++NN L  LP +IGNL KLK +++  
Sbjct: 312 IGMLRSLRFLFADENQLRQLPDELCSCQQLSVLSMANNQLSALPQNIGNLGKLKVINVVN 371

Query: 459 NKLESLPNEIGFLKELQRLILQSNQ 483
           N + +LP  +  L  L  L L  NQ
Sbjct: 372 NYINALPVSMLNLVNLTSLWLSDNQ 396



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 156/326 (47%), Gaps = 28/326 (8%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           +N+  E   CK  ++  LDLS +S+  LP +V  L  L+EL L    L  LP+  G + N
Sbjct: 99  VNVPDEIKACK--HLTRLDLSCNSLQRLPDAVTSLISLQELLLNETYLEFLPANFGRLVN 156

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L L  N+L +LP S+  L  L+ LD+  N+  ELP VV +L SL+ L++ FN+I+ V
Sbjct: 157 LRILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVGELKSLRELWIDFNQIRRV 216

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
             +I  L  L       N +  LP EL   +N+  L +  N+LE  P  +G    LVT  
Sbjct: 217 SANIGKLRELQHFEANGNLLDTLPSELSNWRNVEVLSICSNNLEAFPFSVGMLKSLVTFK 276

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
            + N L  +PD +  L  L  L LS+N+L  +P T+     L     +   L  LPD L 
Sbjct: 277 CESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADENQLRQLPDELC 336

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           S                        Q  SV S+   +NQ+  +P  I +  K L  +N+ 
Sbjct: 337 S-----------------------CQQLSVLSM--ANNQLSALPQNIGNLGK-LKVINVV 370

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQ 414
           +N + +LP+ +   V LT L L  NQ
Sbjct: 371 NNYINALPVSMLNLVNLTSLWLSDNQ 396



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 73/133 (54%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           ++++      + +T LP S+  L  LEEL L  NKL  LPS IG + +L  L   EN L 
Sbjct: 270 KSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADENQLR 329

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LPD L + QQL VL + +N+L+ LP  +  L  LK++ +  N I  +   +  L NL+ 
Sbjct: 330 QLPDELCSCQQLSVLSMANNQLSALPQNIGNLGKLKVINVVNNYINALPVSMLNLVNLTS 389

Query: 221 LSMRDNKIRELPP 233
           L + DN+ + L P
Sbjct: 390 LWLSDNQSQPLVP 402



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 1/158 (0%)

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           + +L+     ++   E  Q+   LE L LS   L+ LP  +   + L+ L +  N LES+
Sbjct: 19  IDKLDYSNTPLTDFPEVWQHERTLEELYLSTTRLQSLPPQLFYCQGLRVLHVNSNNLESI 78

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
           P  IG L++LQ L L  N +V++P  I    +L+ L +  N+LQ +P+ + +L +L  L 
Sbjct: 79  PQAIGSLRQLQNLDLNRNLIVNVPDEIKACKHLTRLDLSCNSLQRLPDAVTSLISLQELL 138

Query: 525 LNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           LN+ T L  +P       NL+I+ L    L  +P  +V
Sbjct: 139 LNE-TYLEFLPANFGRLVNLRILELRLNNLITLPKSMV 175


>gi|395530453|ref|XP_003767309.1| PREDICTED: leucine-rich repeat-containing protein 40 [Sarcophilus
           harrisii]
          Length = 638

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 226/449 (50%), Gaps = 22/449 (4%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN+  L++S + +  LP  + KL +L+ L+L  N+L  +P   G +  L  L L+ N LT
Sbjct: 164 ENLQKLNVSHNKLKTLPQELTKLRNLKGLFLQYNELTCVPEGFGQLHKLEDLDLSNNHLT 223

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP S ++L  L  L+L  N++ +LP+ + ++  LK L    N ++TV  ++  + +L +
Sbjct: 224 ALPVSFSSLSNLMRLNLASNQMKDLPVEITRMKRLKHLDCTSNYLQTVPSELASMESLEL 283

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL-PKEIGNCTMLVTLDLQHNELVNIPD 279
           L +R NK+R L PE      L  L +  N +E L P+ + +   +  LDL+ N+L +IPD
Sbjct: 284 LYLRRNKLRFL-PEFPSCLLLKELHVGENQIEMLGPEHLRHLKSIHVLDLRDNKLKSIPD 342

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS------ 333
            +  L  L RL L+ N + S+P TL     L    +EG  L ++   LL+  T       
Sbjct: 343 EITLLQALERLDLTNNDISSLPHTLGNLPRLQFLALEGNPLRTIRRELLNKGTQEVLKYL 402

Query: 334 --------INNITLSRNKFTAYPSGGPTQ---FTSVYSINFEHNQIDKIPYGIFSRAKN- 381
                   +N    S       PS         T++  +++   Q   IP  IF    N 
Sbjct: 403 RSKIKDDPVNQNEASIETAMTLPSQARVNAHTITALKLLDYSDKQTTLIPDEIFDAVGNN 462

Query: 382 -LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
            ++ VN   N L  +P  +     + ++NLG N++S +S ++  L NL  L + NNLL  
Sbjct: 463 VITSVNFSKNHLNEIPKRIMELKAVCDINLGFNKLSCVSAELGVLQNLAHLDIRNNLLTS 522

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL-PRAIGHLTNLSY 499
           LP  +  L KL+ ++L  N+ ++ P+ +  ++ L+ ++L +NQ+ S+ P  +  +  L+ 
Sbjct: 523 LPEEMEALIKLQTINLSFNRFKTFPSVLYRVRSLETILLSNNQVGSVDPLQLKQMDKLAT 582

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L +  N+L  IP E+G   +L  L L  N
Sbjct: 583 LDLQNNDLLHIPPELGNCVSLRALLLEGN 611



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 232/500 (46%), Gaps = 50/500 (10%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           L +L +  NKL SL   +  +  LT L + +N LTSLP ++  L+ L+ L++ HNKL  L
Sbjct: 120 LTKLIISNNKLQSLSDDLRLLPALTILDMHDNLLTSLPCAIGELENLQKLNVSHNKLKTL 179

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  + KL +LK L+L++N +  V      L  L  L + +N +  LP     L NL+ L+
Sbjct: 180 PQELTKLRNLKGLFLQYNELTCVPEGFGQLHKLEDLDLSNNHLTALPVSFSSLSNLMRLN 239

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           LA N +++LP EI     L  LD   N L  +P  L ++ +L  L L  N+L  +PE   
Sbjct: 240 LASNQMKDLPVEITRMKRLKHLDCTSNYLQTVPSELASMESLELLYLRRNKLRFLPE-FP 298

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
            C+ L E +V    +  L    L  L SI+ + L  NK  + P    T   ++  ++  +
Sbjct: 299 SCLLLKELHVGENQIEMLGPEHLRHLKSIHVLDLRDNKLKSIPDEI-TLLQALERLDLTN 357

Query: 366 NQIDKIPY--GIFSRAKNLS-------------------------KVNMKDNLLT----- 393
           N I  +P+  G   R + L+                         +  +KD+ +      
Sbjct: 358 NDISSLPHTLGNLPRLQFLALEGNPLRTIRRELLNKGTQEVLKYLRSKIKDDPVNQNEAS 417

Query: 394 -----SLP----LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV---LSNNLLKKL 441
                +LP    ++  T   L  L+    Q + + ++I + V   V+     S N L ++
Sbjct: 418 IETAMTLPSQARVNAHTITALKLLDYSDKQTTLIPDEIFDAVGNNVITSVNFSKNHLNEI 477

Query: 442 PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLS 501
           P  I  L+ +  ++L  NKL  +  E+G L+ L  L +++N L SLP  +  L  L  ++
Sbjct: 478 PKRIMELKAVCDINLGFNKLSCVSAELGVLQNLAHLDIRNNLLTSLPEEMEALIKLQTIN 537

Query: 502 VGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +  N  ++ P  +  + +L T+ L++N   +  P +L     L  + L N  L  IP E+
Sbjct: 538 LSFNRFKTFPSVLYRVRSLETILLSNNQVGSVDPLQLKQMDKLATLDLQNNDLLHIPPEL 597

Query: 562 VVGGPSLIIRYLKMQG-PYR 580
              G  + +R L ++G P+R
Sbjct: 598 ---GNCVSLRALLLEGNPFR 614



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 171/329 (51%), Gaps = 6/329 (1%)

Query: 247 AHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK 306
           A + L E+P+ +    + +  + + N   N  +     I+LT+L +S N+L+S+ + L  
Sbjct: 80  APSSLSEVPQTVWRINLDLPEEAKQNHSFNASERWWEQIDLTKLIISNNKLQSLSDDLRL 139

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
              L   ++    L+SLP   +  L ++  + +S NK    P    T+  ++  +  ++N
Sbjct: 140 LPALTILDMHDNLLTSLPCA-IGELENLQKLNVSHNKLKTLPQEL-TKLRNLKGLFLQYN 197

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
           ++  +P G F +   L  +++ +N LT+LP+   +   L  LNL +NQ+  L  +I  + 
Sbjct: 198 ELTCVPEG-FGQLHKLEDLDLSNNHLTALPVSFSSLSNLMRLNLASNQMKDLPVEITRMK 256

Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
            L+ L  ++N L+ +PS + ++  L+ L L  NKL  LP E      L+ L +  NQ+  
Sbjct: 257 RLKHLDCTSNYLQTVPSELASMESLELLYLRRNKLRFLP-EFPSCLLLKELHVGENQIEM 315

Query: 487 L-PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
           L P  + HL ++  L + +N L+SIP+EI  L+ L  L L +N  ++++P  L     LQ
Sbjct: 316 LGPEHLRHLKSIHVLDLRDNKLKSIPDEITLLQALERLDLTNND-ISSLPHTLGNLPRLQ 374

Query: 546 IMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
            ++L+  PL  I  E++  G   +++YL+
Sbjct: 375 FLALEGNPLRTIRRELLNKGTQEVLKYLR 403


>gi|320165747|gb|EFW42646.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 637

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 127/384 (33%), Positives = 199/384 (51%), Gaps = 4/384 (1%)

Query: 106 LDLSKSSITHLPPSV-EKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           LD S   ++++P  V +    LE+L L  NKL  LP  +  +T+L  L   EN L +LP 
Sbjct: 10  LDYSDCDLSYVPAEVFDTPKQLEQLILDTNKLVGLPLTMERLTSLVSLSCCENQLRTLPS 69

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMR 224
              +L +L  L LR N++ ELP  +  L +L++L L  N++  +   +  LS+L +L + 
Sbjct: 70  GFGSLSKLEELRLRDNQIAELPEEIQSLIALRVLQLNVNQLSLLPRGVLALSSLQVLDLS 129

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           +N+I  LP ELG LKNL  L +  N L  LP +I   T LV L +  N L  +P  +G L
Sbjct: 130 ENQIHLLPTELGVLKNLTELWVRENLLRSLPDQICELTNLVKLGVGGNTLGELPQNIGRL 189

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
           +NL  L L  N L  +P + S    L   ++    L +LP     +LT++ ++ L+ N  
Sbjct: 190 VNLEELWLDDNDLTELPPSFSSLKSLKLLDLTSNHLRTLPAD-FGNLTALTDLWLTSNDL 248

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
           T+ P+       +++SI  E+N+++ +P   FS A +L +    +N L  LP  +     
Sbjct: 249 TSLPASI-GNLRNMHSIAAENNKLEVLPATFFS-ATSLREFRFSNNYLEELPAGIENLTE 306

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L  + L  N + +L E +     +  L LS+NLL +LPSS+G+L+ L  L L  N+L  L
Sbjct: 307 LHSIYLERNDVFELPELLGRCTKITNLFLSDNLLVRLPSSMGSLQSLSVLSLNNNRLACL 366

Query: 465 PNEIGFLKELQRLILQSNQLVSLP 488
           P E+  +  L  L L   Q   +P
Sbjct: 367 PLELKHIASLSALWLSDTQRKPVP 390



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 191/396 (48%), Gaps = 29/396 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR 229
           +QL  L L  NKL  LP+ + +LTSL  L    N+++T+      LS L  L +RDN+I 
Sbjct: 29  KQLEQLILDTNKLVGLPLTMERLTSLVSLSCCENQLRTLPSGFGSLSKLEELRLRDNQIA 88

Query: 230 ELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTR 289
           ELP E+  L  L  L L  N L  LP+ +   + L  LDL  N++  +P  LG L NLT 
Sbjct: 89  ELPEEIQSLIALRVLQLNVNQLSLLPRGVLALSSLQVLDLSENQIHLLPTELGVLKNLTE 148

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS 349
           L +  N L S+P+ + +  +L +  V G  L  LP  +   L ++  + L  N  T  P 
Sbjct: 149 LWVRENLLRSLPDQICELTNLVKLGVGGNTLGELPQNI-GRLVNLEELWLDDNDLTELPP 207

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
                                     FS  K+L  +++  N L +LP D G    LT+L 
Sbjct: 208 -------------------------SFSSLKSLKLLDLTSNHLRTLPADFGNLTALTDLW 242

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           L +N ++ L   I NL N+  +   NN L+ LP++  +   L+      N LE LP  I 
Sbjct: 243 LTSNDLTSLPASIGNLRNMHSIAAENNKLEVLPATFFSATSLREFRFSNNYLEELPAGIE 302

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
            L EL  + L+ N +  LP  +G  T ++ L + +N L  +P  +G+L++L  L LN+N 
Sbjct: 303 NLTELHSIYLERNDVFELPELLGRCTKITNLFLSDNLLVRLPSSMGSLQSLSVLSLNNNR 362

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPS--EIVV 563
            L  +P EL   ++L  + L +     +P+  E VV
Sbjct: 363 -LACLPLELKHIASLSALWLSDTQRKPVPALHEAVV 397



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 177/382 (46%), Gaps = 72/382 (18%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  + +  LP ++E+LT L  L    N+L +LPS  G ++ L  L L +N +  LP+ + 
Sbjct: 36  LDTNKLVGLPLTMERLTSLVSLSCCENQLRTLPSGFGSLSKLEELRLRDNQIAELPEEIQ 95

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
           +L  LRVL L  N+L+ LP  V  L+SL++L L  N+I  +  ++  L NL+ L +R+N 
Sbjct: 96  SLIALRVLQLNVNQLSLLPRGVLALSSLQVLDLSENQIHLLPTELGVLKNLTELWVRENL 155

Query: 228 IRELPPELGELKNLVTL------------------------------------------- 244
           +R LP ++ EL NLV L                                           
Sbjct: 156 LRSLPDQICELTNLVKLGVGGNTLGELPQNIGRLVNLEELWLDDNDLTELPPSFSSLKSL 215

Query: 245 ---DLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
              DL  NHL  LP + GN T L  L L  N+L ++P  +GNL N+  +    N+LE +P
Sbjct: 216 KLLDLTSNHLRTLPADFGNLTALTDLWLTSNDLTSLPASIGNLRNMHSIAAENNKLEVLP 275

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
            T      L EF      L  LP G       I N+                  T ++SI
Sbjct: 276 ATFFSATSLREFRFSNNYLEELPAG-------IENL------------------TELHSI 310

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
             E N + ++P  +  R   ++ + + DNLL  LP  +G+   L+ L+L  N+++ L  +
Sbjct: 311 YLERNDVFELPE-LLGRCTKITNLFLSDNLLVRLPSSMGSLQSLSVLSLNNNRLACLPLE 369

Query: 422 IQNLVNLEVLVLSNNLLKKLPS 443
           ++++ +L  L LS+   K +P+
Sbjct: 370 LKHIASLSALWLSDTQRKPVPA 391



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 176/375 (46%), Gaps = 53/375 (14%)

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           + + S  + L   D  +  +P E+ +  K L  L L  N L  LP  +   T LV+L   
Sbjct: 1   MHFGSRCNTLDYSDCDLSYVPAEVFDTPKQLEQLILDTNKLVGLPLTMERLTSLVSLSCC 60

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
            N+L  +P   G+L  L  LRL  N++  +PE +   + L    +    LS LP G+L+ 
Sbjct: 61  ENQLRTLPSGFGSLSKLEELRLRDNQIAELPEEIQSLIALRVLQLNVNQLSLLPRGVLA- 119

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           L+S+  + LS N+    P+                        G+    KNL+++ +++N
Sbjct: 120 LSSLQVLDLSENQIHLLPTE----------------------LGVL---KNLTELWVREN 154

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
           LL SLP  +     L +L +G N + +L ++I  LVNLE L L +N L +LP S  +L+ 
Sbjct: 155 LLRSLPDQICELTNLVKLGVGGNTLGELPQNIGRLVNLEELWLDDNDLTELPPSFSSLKS 214

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN---- 506
           LK LDL  N L +LP + G L  L  L L SN L SLP +IG+L N+  ++  ENN    
Sbjct: 215 LKLLDLTSNHLRTLPADFGNLTALTDLWLTSNDLTSLPASIGNLRNMHSIA-AENNKLEV 273

Query: 507 --------------------LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQI 546
                               L+ +P  I  L  LH++YL  N     +P  L  C+ +  
Sbjct: 274 LPATFFSATSLREFRFSNNYLEELPAGIENLTELHSIYLERNDVF-ELPELLGRCTKITN 332

Query: 547 MSLDNCPLSQIPSEI 561
           + L +  L ++PS +
Sbjct: 333 LFLSDNLLVRLPSSM 347



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 114/204 (55%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L + ++ +  LP  + +LT+L +L + GN L  LP  IG + NL  L L +N LT
Sbjct: 144 KNLTELWVRENLLRSLPDQICELTNLVKLGVGGNTLGELPQNIGRLVNLEELWLDDNDLT 203

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP S ++L+ L++LDL  N L  LP     LT+L  L+L  N + ++   I  L N+  
Sbjct: 204 ELPPSFSSLKSLKLLDLTSNHLRTLPADFGNLTALTDLWLTSNDLTSLPASIGNLRNMHS 263

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           ++  +NK+  LP       +L     ++N+LEELP  I N T L ++ L+ N++  +P++
Sbjct: 264 IAAENNKLEVLPATFFSATSLREFRFSNNYLEELPAGIENLTELHSIYLERNDVFELPEL 323

Query: 281 LGNLINLTRLRLSYNRLESVPETL 304
           LG    +T L LS N L  +P ++
Sbjct: 324 LGRCTKITNLFLSDNLLVRLPSSM 347


>gi|434403391|ref|YP_007146276.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
           stagnale PCC 7417]
 gi|428257646|gb|AFZ23596.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
           stagnale PCC 7417]
          Length = 938

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/289 (33%), Positives = 158/289 (54%), Gaps = 9/289 (3%)

Query: 98  CKEENILNLDL-------SKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
            KE+ ++ LDL        K  +T +P  V  LT LEEL L  N++ +LP  I  + NL+
Sbjct: 15  AKEKRLIKLDLRNDWGTPDKDKLTEIPAEVFALTWLEELDLSRNEMTTLPDAIAKLQNLS 74

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L+ N +T+LPD++A LQ L  LDL +N +  LP  + KL +L  L L  N+I T+  
Sbjct: 75  TLYLSHNGITTLPDAIAQLQNLNSLDLSYNGITTLPDAIAKLHNLTTLNLSVNKITTLPD 134

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
            I  L NL+ L++  N+IR LP  + +L NL +L+L  N +  LP  I     L +LDL 
Sbjct: 135 AIAKLHNLTTLNLSVNRIRTLPDAIAKLHNLTSLNLNGNRITTLPDAIAKLHNLTSLDLS 194

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
            N +  +PD +  L NLT L L  N + ++P+ ++K  +L   ++ G  +++LPD  ++ 
Sbjct: 195 GNRITTLPDAIAKLHNLTSLSLWNNGITTLPDAIAKLHNLTSLDLSGNRITTLPDA-IAK 253

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           L +++ + L  N+ T  P     Q  ++ S++   N I+K P  +  + 
Sbjct: 254 LQNLSTLDLRGNEITTLPD-AIAQLHNLTSLDLRRNPIEKPPLEVVKKG 301



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 144/280 (51%), Gaps = 4/280 (1%)

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
           ++L  +P  +     L E ++    +++LPD + + L +++ + LS N  T  P     Q
Sbjct: 35  DKLTEIPAEVFALTWLEELDLSRNEMTTLPDAI-AKLQNLSTLYLSHNGITTLPDA-IAQ 92

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
             ++ S++  +N I  +P  I ++  NL+ +N+  N +T+LP  +     LT LNL  N+
Sbjct: 93  LQNLNSLDLSYNGITTLPDAI-AKLHNLTTLNLSVNKITTLPDAIAKLHNLTTLNLSVNR 151

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           I  L + I  L NL  L L+ N +  LP +I  L  L  LDL  N++ +LP+ I  L  L
Sbjct: 152 IRTLPDAIAKLHNLTSLNLNGNRITTLPDAIAKLHNLTSLDLSGNRITTLPDAIAKLHNL 211

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
             L L +N + +LP AI  L NL+ L +  N + ++P+ I  L+NL TL L  N  +  +
Sbjct: 212 TSLSLWNNGITTLPDAIAKLHNLTSLDLSGNRITTLPDAIAKLQNLSTLDLRGNE-ITTL 270

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
           P  +A   NL  + L   P+ + P E+V  G   I  Y +
Sbjct: 271 PDAIAQLHNLTSLDLRRNPIEKPPLEVVKKGIEAIRDYFR 310



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 60/106 (56%), Gaps = 1/106 (0%)

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
           +++KL  +P E+  L  L+ L L  N++ +LP AI  L NLS L +  N + ++P+ I  
Sbjct: 33  DKDKLTEIPAEVFALTWLEELDLSRNEMTTLPDAIAKLQNLSTLYLSHNGITTLPDAIAQ 92

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           L+NL++L L+ N  +  +P  +A   NL  ++L    ++ +P  I 
Sbjct: 93  LQNLNSLDLSYN-GITTLPDAIAKLHNLTTLNLSVNKITTLPDAIA 137


>gi|348524302|ref|XP_003449662.1| PREDICTED: protein LAP2 [Oreochromis niloticus]
          Length = 1352

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 205/443 (46%), Gaps = 50/443 (11%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE + +LD S  S+  +P  +      L+ELYL  N++  LP Q+     L  L +
Sbjct: 22  LRGEEEIVTSLDYSHCSLETVPKEIFNFEKTLQELYLDANQIEELPKQLFNCQLLNRLSM 81

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N LT LP ++ANL  LR LD+  N + + P                        +I+ 
Sbjct: 82  PDNDLTVLPAAIANLINLRELDVSKNSIQDFPE-----------------------NIKN 118

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
              L+++    N I +LP    +L +L  L L    LE LP   G  T L  L+L+ N+L
Sbjct: 119 CKGLAIVEASVNPISKLPEGFTQLLSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQL 178

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P  +  L  L RL L  N    VPE + +   L E  ++G  L+ LP G+L +L  +
Sbjct: 179 KMLPKSMQKLTQLERLDLGSNEFTEVPEVVEQLTGLKELWMDGNKLTFLP-GMLGTLKQL 237

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + +S+N                   N E   +D+   G     +NL  + + +N LT 
Sbjct: 238 VYLDVSKN-------------------NLE--MVDEQICG----CENLQDLLLSNNALTQ 272

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +GT   LT L +  NQ+  L + I  L  ++ L  S N ++ LP++IG    ++  
Sbjct: 273 LPGSIGTLKKLTALKVDENQLMYLPDSIGGLTCIDELDCSFNEIEALPATIGQCVNMRTF 332

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
             + N L  LP E+G  K    L L SN+L SLP  +G +  L  +++  N L+++P   
Sbjct: 333 AADHNFLAQLPPEMGNWKRATVLFLHSNKLESLPEEMGDMQKLKVINLSNNKLKNLPYSF 392

Query: 515 GTLENLHTLYLNDNTCLNNIPFE 537
             L  L  ++L++N     IP +
Sbjct: 393 TKLTELTAMWLSENQSKPLIPLQ 415



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 184/385 (47%), Gaps = 28/385 (7%)

Query: 175 LDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           LD  H  L  +P  ++    +L+ LYL  N+I+ +   +     L+ LSM DN +  LP 
Sbjct: 32  LDYSHCSLETVPKEIFNFEKTLQELYLDANQIEELPKQLFNCQLLNRLSMPDNDLTVLPA 91

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
            +  L NL  LD++ N +++ P+ I NC  L  ++   N +  +P+    L++LT+L L+
Sbjct: 92  AIANLINLRELDVSKNSIQDFPENIKNCKGLAIVEASVNPISKLPEGFTQLLSLTQLYLN 151

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              LE +P +  +   L    +    L  LP  +   LT +  + L  N+FT  P     
Sbjct: 152 DAFLEFLPASFGRLTKLQILELRENQLKMLPKSM-QKLTQLERLDLGSNEFTEVPE---- 206

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
                                +  +   L ++ M  N LT LP  LGT   L  L++  N
Sbjct: 207 ---------------------VVEQLTGLKELWMDGNKLTFLPGMLGTLKQLVYLDVSKN 245

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
            +  + E I    NL+ L+LSNN L +LP SIG L+KL  L ++EN+L  LP+ IG L  
Sbjct: 246 NLEMVDEQICGCENLQDLLLSNNALTQLPGSIGTLKKLTALKVDENQLMYLPDSIGGLTC 305

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           +  L    N++ +LP  IG   N+   +   N L  +P E+G  +    L+L+ N  L +
Sbjct: 306 IDELDCSFNEIEALPATIGQCVNMRTFAADHNFLAQLPPEMGNWKRATVLFLHSNK-LES 364

Query: 534 IPFELALCSNLQIMSLDNCPLSQIP 558
           +P E+     L++++L N  L  +P
Sbjct: 365 LPEEMGDMQKLKVINLSNNKLKNLP 389



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 157/323 (48%), Gaps = 27/323 (8%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           K L  L L  N +EELPK++ NC +L  L +  N+L  +P  + NLINL  L +S N ++
Sbjct: 51  KTLQELYLDANQIEELPKQLFNCQLLNRLSMPDNDLTVLPAAIANLINLRELDVSKNSIQ 110

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
             PE +  C  L         +S LP+G                          TQ  S+
Sbjct: 111 DFPENIKNCKGLAIVEASVNPISKLPEGF-------------------------TQLLSL 145

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
             +      ++ +P   F R   L  + +++N L  LP  +     L  L+LG+N+ +++
Sbjct: 146 TQLYLNDAFLEFLPAS-FGRLTKLQILELRENQLKMLPKSMQKLTQLERLDLGSNEFTEV 204

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
            E ++ L  L+ L +  N L  LP  +G L++L  LD+ +N LE +  +I   + LQ L+
Sbjct: 205 PEVVEQLTGLKELWMDGNKLTFLPGMLGTLKQLVYLDVSKNNLEMVDEQICGCENLQDLL 264

Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFEL 538
           L +N L  LP +IG L  L+ L V EN L  +P+ IG L  +  L  + N  +  +P  +
Sbjct: 265 LSNNALTQLPGSIGTLKKLTALKVDENQLMYLPDSIGGLTCIDELDCSFNE-IEALPATI 323

Query: 539 ALCSNLQIMSLDNCPLSQIPSEI 561
             C N++  + D+  L+Q+P E+
Sbjct: 324 GQCVNMRTFAADHNFLAQLPPEM 346



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 157/310 (50%), Gaps = 11/310 (3%)

Query: 88  DLNIEKEFLRCKEENILN------LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS 141
           +L++ K  ++   ENI N      ++ S + I+ LP    +L  L +LYL    L  LP+
Sbjct: 101 ELDVSKNSIQDFPENIKNCKGLAIVEASVNPISKLPEGFTQLLSLTQLYLNDAFLEFLPA 160

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
             G +T L  L L EN L  LP S+  L QL  LDL  N+  E+P VV +LT LK L++ 
Sbjct: 161 SFGRLTKLQILELRENQLKMLPKSMQKLTQLERLDLGSNEFTEVPEVVEQLTGLKELWMD 220

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N++  +   +  L  L  L +  N +  +  ++   +NL  L L++N L +LP  IG  
Sbjct: 221 GNKLTFLPGMLGTLKQLVYLDVSKNNLEMVDEQICGCENLQDLLLSNNALTQLPGSIGTL 280

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L  L +  N+L+ +PD +G L  +  L  S+N +E++P T+ +CV++  F  +   L+
Sbjct: 281 KKLTALKVDENQLMYLPDSIGGLTCIDELDCSFNEIEALPATIGQCVNMRTFAADHNFLA 340

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
            LP   + +      + L  NK  + P   G  Q   V  IN  +N++  +PY  F++  
Sbjct: 341 QLPPE-MGNWKRATVLFLHSNKLESLPEEMGDMQKLKV--INLSNNKLKNLPYS-FTKLT 396

Query: 381 NLSKVNMKDN 390
            L+ + + +N
Sbjct: 397 ELTAMWLSEN 406



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 1/202 (0%)

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           V S+++ H  ++ +P  IF+  K L ++ +  N +  LP  L     L  L++  N ++ 
Sbjct: 29  VTSLDYSHCSLETVPKEIFNFEKTLQELYLDANQIEELPKQLFNCQLLNRLSMPDNDLTV 88

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L   I NL+NL  L +S N ++  P +I N + L  ++   N +  LP     L  L +L
Sbjct: 89  LPAAIANLINLRELDVSKNSIQDFPENIKNCKGLAIVEASVNPISKLPEGFTQLLSLTQL 148

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L    L  LP + G LT L  L + EN L+ +P+ +  L  L  L L  N     +P  
Sbjct: 149 YLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMQKLTQLERLDLGSNE-FTEVPEV 207

Query: 538 LALCSNLQIMSLDNCPLSQIPS 559
           +   + L+ + +D   L+ +P 
Sbjct: 208 VEQLTGLKELWMDGNKLTFLPG 229


>gi|321460320|gb|EFX71363.1| hypothetical protein DAPPUDRAFT_60262 [Daphnia pulex]
          Length = 481

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 216/445 (48%), Gaps = 54/445 (12%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH---LEELYLYGNKLASLPSQIGYVTNLTCL 152
           L+ +E+++  LD   SS++ +P   E   H   LE L L  N++A LP  + +   L  L
Sbjct: 4   LKPEEDDVQVLDYEHSSLSDVP--AEVFNHERTLEILRLDCNQIADLPRPLFHCHGLKEL 61

Query: 153 GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
            L++N +  LP +LA+L  L+VLD+  N L E+P  +  L +L IL L  N +  +    
Sbjct: 62  WLSDNEIALLPPALASLIHLQVLDVSKNSLTEVPDAISGLKALIILDLSVNPLGKLPEGA 121

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L +L  L++ D  +  LP   G L  L  L+L  N L  LPK +   T L  LD+  N
Sbjct: 122 TKLLSLESLNLSDTFLEFLPANFGRLTKLRLLELRENQLATLPKSMARLTALKRLDMGQN 181

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
           +L ++P+++G++ +LT L +  N+L+ +PE                         +  L 
Sbjct: 182 DLCDLPEVVGSIPSLTELWVDGNKLDVLPE------------------------FVGHLQ 217

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
           ++ ++  SRN         PT                          K+L+ +++  N L
Sbjct: 218 NLVHLDASRNCLHGI---APT----------------------IGLCKSLTDLSLTSNNL 252

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
            +LP ++G    LT L +  N+++ L + +  L NLE L    N L KLP+SIG LRKL+
Sbjct: 253 ANLPEEIGDLTLLTVLRVDDNRLTCLPDSVGRLSNLEELQAGQNRLSKLPASIGLLRKLE 312

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE 512
            L L EN LE LP E+G  + L  L L+ N+L  LP  +GHL+ L  +++  N L  +P 
Sbjct: 313 TLMLNENLLEELPVELGSCQRLTVLSLRKNRLEHLPPEMGHLSRLRVVNLSCNRLLHLPV 372

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFE 537
               L +L  L+L++      +P +
Sbjct: 373 SFLKLPSLSALWLSEAQTKPVVPLQ 397



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 169/346 (48%), Gaps = 5/346 (1%)

Query: 217 NLSMLSMRDNKIRELPPEL-GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
           ++ +L    + + ++P E+    + L  L L  N + +LP+ + +C  L  L L  NE+ 
Sbjct: 10  DVQVLDYEHSSLSDVPAEVFNHERTLEILRLDCNQIADLPRPLFHCHGLKELWLSDNEIA 69

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            +P  L +LI+L  L +S N L  VP+ +S    L   ++    L  LP+G  ++     
Sbjct: 70  LLPPALASLIHLQVLDVSKNSLTEVPDAISGLKALIILDLSVNPLGKLPEG--ATKLLSL 127

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
                 + F  +      + T +  +    NQ+  +P  + +R   L +++M  N L  L
Sbjct: 128 ESLNLSDTFLEFLPANFGRLTKLRLLELRENQLATLPKSM-ARLTALKRLDMGQNDLCDL 186

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P  +G+   LTEL +  N++  L E + +L NL  L  S N L  +  +IG  + L  L 
Sbjct: 187 PEVVGSIPSLTELWVDGNKLDVLPEFVGHLQNLVHLDASRNCLHGIAPTIGLCKSLTDLS 246

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L  N L +LP EIG L  L  L +  N+L  LP ++G L+NL  L  G+N L  +P  IG
Sbjct: 247 LTSNNLANLPEEIGDLTLLTVLRVDDNRLTCLPDSVGRLSNLEELQAGQNRLSKLPASIG 306

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L  L TL LN+N  L  +P EL  C  L ++SL    L  +P E+
Sbjct: 307 LLRKLETLMLNENL-LEELPVELGSCQRLTVLSLRKNRLEHLPPEM 351



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 165/332 (49%), Gaps = 12/332 (3%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD+SK+S+T +P ++  L  L  L L  N L  LP     + +L  L L++  L  LP +
Sbjct: 84  LDVSKNSLTEVPDAISGLKALIILDLSVNPLGKLPEGATKLLSLESLNLSDTFLEFLPAN 143

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
              L +LR+L+LR N+L  LP  + +LT+LK L +  N +  +   +  + +L+ L +  
Sbjct: 144 FGRLTKLRLLELRENQLATLPKSMARLTALKRLDMGQNDLCDLPEVVGSIPSLTELWVDG 203

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+  LP  +G L+NLV LD + N L  +   IG C  L  L L  N L N+P+ +G+L 
Sbjct: 204 NKLDVLPEFVGHLQNLVHLDASRNCLHGIAPTIGLCKSLTDLSLTSNNLANLPEEIGDLT 263

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            LT LR+  NRL  +P+++ +  +L E       LS LP   +  L  +  + L+ N   
Sbjct: 264 LLTVLRVDDNRLTCLPDSVGRLSNLEELQAGQNRLSKLPAS-IGLLRKLETLMLNENLLE 322

Query: 346 AYPSG-GPTQFTSVYSINFEHNQIDKIP--YGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
             P   G  Q  +V S+    N+++ +P   G  SR   L  VN+  N L  LP+     
Sbjct: 323 ELPVELGSCQRLTVLSL--RKNRLEHLPPEMGHLSR---LRVVNLSCNRLLHLPVSFLKL 377

Query: 403 VGLTELNLGTNQ---ISKLSEDIQNLVNLEVL 431
             L+ L L   Q   +  L  D+ +    +VL
Sbjct: 378 PSLSALWLSEAQTKPVVPLQTDVDSATGHKVL 409


>gi|350591711|ref|XP_003358723.2| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Sus scrofa]
          Length = 561

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 142/473 (30%), Positives = 230/473 (48%), Gaps = 34/473 (7%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL--TSLPDS 165
           L  + IT +P  ++ L ++  LYL  NKL  L  ++G ++ L  L L++N L  +SLP  
Sbjct: 56  LENNQITEIPKDIKYLRNVRILYLNKNKLRDLCPELGELSRLEGLDLSDNPLLASSLP-V 114

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF-NRIKTVHPDIQYLSNLSMLSMR 224
           L++ ++LR L L H  + E+P+V+ KL     L     N +K++  +I   + L  + ++
Sbjct: 115 LSSNRKLRELRLYHTDMGEIPIVLCKLLHHLELLGLAGNHLKSLPKEIANQTKLREIHLK 174

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
            N+    P EL  L NL  +DL  N L  +P+EIGN   L    + +N L  +P+ L   
Sbjct: 175 QNQFEVFPLELCLLDNLEIIDLDENKLTVIPEEIGNLRKLRKFYVAYNSLPVLPEALCQC 234

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
             L+ L LSYNRL S+P TL++   + E  + G  L  +P  L+   TS++ + L RN  
Sbjct: 235 TQLSVLDLSYNRLHSIPHTLAELTEMTEVGLSGNHLEKVPR-LICKWTSLHLLYL-RNTG 292

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
                    +  ++  ++   N ++  P  I +  +NL  + + DN +  LP D G+   
Sbjct: 293 LRVLRHNFRRLVNLRFLDLSQNCLECCPLQICA-LRNLEILALDDNKIYQLPSDFGSLSK 351

Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL---LKKLPSSIGNLRKLKCLDLEENKL 461
           L  L L  NQ S   E+I +L +LE L +  +    L  LP  I  L+ LK L +E N L
Sbjct: 352 LKMLGLTGNQFSSFPEEILSLESLEKLYIGQDQGAKLTHLPECIRKLQSLKELYIENNHL 411

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
           E LP  +G +  L+ L  + N +  LP AI     L  L + +N + S+PE + +L    
Sbjct: 412 EHLPVSLGSMPNLEILDCRHNLIKQLPDAICQAQALKELRLEDNLITSLPENLDSL---- 467

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
                                NL++++L N P+ + P  +   GP  +  +LK
Sbjct: 468 --------------------VNLKVLTLMNNPIEEPPMTVCTKGPETVWIHLK 500



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 193/418 (46%), Gaps = 36/418 (8%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
            +D  +  L  +P  + +L  L+ ++L  N+I  +  DI+YL N+ +L +  NK+R+L P
Sbjct: 30  FIDASNQSLPAIPAAILELRELEEVHLENNQITEIPKDIKYLRNVRILYLNKNKLRDLCP 89

Query: 234 ELGELKNLVTLDLAHNHL--EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLR 291
           ELGEL  L  LDL+ N L    LP    N   L  L L H ++  IP +L  L++   L 
Sbjct: 90  ELGELSRLEGLDLSDNPLLASSLPVLSSN-RKLRELRLYHTDMGEIPIVLCKLLHHLELL 148

Query: 292 L-SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS- 349
             + N L+S+P+ ++    L E +++       P  L   L ++  I L  NK T  P  
Sbjct: 149 GLAGNHLKSLPKEIANQTKLREIHLKQNQFEVFPLEL-CLLDNLEIIDLDENKLTVIPEE 207

Query: 350 -GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
            G   +    Y     +N +  +P  +  +   LS +++  N L S+P  L     +TE+
Sbjct: 208 IGNLRKLRKFY---VAYNSLPVLPEAL-CQCTQLSVLDLSYNRLHSIPHTLAELTEMTEV 263

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
            L  N + K+   I    +L +L L N  L+ L  +   L  L+ LDL +N LE  P +I
Sbjct: 264 GLSGNHLEKVPRLICKWTSLHLLYLRNTGLRVLRHNFRRLVNLRFLDLSQNCLECCPLQI 323

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN-- 526
             L+ L+ L L  N++  LP   G L+ L  L +  N   S PEEI +LE+L  LY+   
Sbjct: 324 CALRNLEILALDDNKIYQLPSDFGSLSKLKMLGLTGNQFSSFPEEILSLESLEKLYIGQD 383

Query: 527 -----------------------DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                                  +N  L ++P  L    NL+I+   +  + Q+P  I
Sbjct: 384 QGAKLTHLPECIRKLQSLKELYIENNHLEHLPVSLGSMPNLEILDCRHNLIKQLPDAI 441



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 162/323 (50%), Gaps = 29/323 (8%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C  +N+  +DL ++ +T +P  +  L  L + Y+  N L  LP  +   T L+ L L+ N
Sbjct: 186 CLLDNLEIIDLDENKLTVIPEEIGNLRKLRKFYVAYNSLPVLPEALCQCTQLSVLDLSYN 245

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L S+P +LA L ++  + L  N L ++P ++ K TSL +LYLR   ++ +  + + L N
Sbjct: 246 RLHSIPHTLAELTEMTEVGLSGNHLEKVPRLICKWTSLHLLYLRNTGLRVLRHNFRRLVN 305

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N +   P ++  L+NL  L L  N + +LP + G+ + L  L L  N+  + 
Sbjct: 306 LRFLDLSQNCLECCPLQICALRNLEILALDDNKIYQLPSDFGSLSKLKMLGLTGNQFSSF 365

Query: 278 PDMLGNLINLTRLRLSYN---RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           P+ + +L +L +L +  +   +L  +PE + K   L E  +E   L  LP     SL S+
Sbjct: 366 PEEILSLESLEKLYIGQDQGAKLTHLPECIRKLQSLKELYIENNHLEHLP----VSLGSM 421

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            N+ +                     ++  HN I ++P  I  +A+ L ++ ++DNL+TS
Sbjct: 422 PNLEI---------------------LDCRHNLIKQLPDAI-CQAQALKELRLEDNLITS 459

Query: 395 LPLDLGTWVGLTELNLGTNQISK 417
           LP +L + V L  L L  N I +
Sbjct: 460 LPENLDSLVNLKVLTLMNNPIEE 482



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 159/359 (44%), Gaps = 25/359 (6%)

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           +RI   H   Q       +   +  +  +P  + EL+ L  + L +N + E+PK+I    
Sbjct: 13  SRIHQKHHSQQVSDRTFFIDASNQSLPAIPAAILELRELEEVHLENNQITEIPKDIKYLR 72

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            +  L L  N+L ++   LG L  L  L LS N L +                     SS
Sbjct: 73  NVRILYLNKNKLRDLCPELGELSRLEGLDLSDNPLLA---------------------SS 111

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LP  +LSS   +  + L        P         +  +    N +  +P  I ++ K L
Sbjct: 112 LP--VLSSNRKLRELRLYHTDMGEIPIVLCKLLHHLELLGLAGNHLKSLPKEIANQTK-L 168

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
            ++++K N     PL+L     L  ++L  N+++ + E+I NL  L    ++ N L  LP
Sbjct: 169 REIHLKQNQFEVFPLELCLLDNLEIIDLDENKLTVIPEEIGNLRKLRKFYVAYNSLPVLP 228

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
            ++    +L  LDL  N+L S+P+ +  L E+  + L  N L  +PR I   T+L  L +
Sbjct: 229 EALCQCTQLSVLDLSYNRLHSIPHTLAELTEMTEVGLSGNHLEKVPRLICKWTSLHLLYL 288

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
               L+ +      L NL  L L+ N CL   P ++    NL+I++LD+  + Q+PS+ 
Sbjct: 289 RNTGLRVLRHNFRRLVNLRFLDLSQN-CLECCPLQICALRNLEILALDDNKIYQLPSDF 346



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 109/212 (51%), Gaps = 3/212 (1%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLA 155
           L CK  ++  L L  + +  L  +  +L +L  L L  N L   P QI  + NL  L L 
Sbjct: 276 LICKWTSLHLLYLRNTGLRVLRHNFRRLVNLRFLDLSQNCLECCPLQICALRNLEILALD 335

Query: 156 ENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR-IKTVH-PD-I 212
           +N +  LP    +L +L++L L  N+ +  P  +  L SL+ LY+  ++  K  H P+ I
Sbjct: 336 DNKIYQLPSDFGSLSKLKMLGLTGNQFSSFPEEILSLESLEKLYIGQDQGAKLTHLPECI 395

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
           + L +L  L + +N +  LP  LG + NL  LD  HN +++LP  I     L  L L+ N
Sbjct: 396 RKLQSLKELYIENNHLEHLPVSLGSMPNLEILDCRHNLIKQLPDAICQAQALKELRLEDN 455

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETL 304
            + ++P+ L +L+NL  L L  N +E  P T+
Sbjct: 456 LITSLPENLDSLVNLKVLTLMNNPIEEPPMTV 487


>gi|307204168|gb|EFN83009.1| Protein lap4 [Harpegnathos saltator]
          Length = 1538

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 195/394 (49%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L  +P  + + + SL+ L L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEYVDKRHCSLPCVPDDILRYSRSLEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P+ I N   L   D   N +  +P     L NLT
Sbjct: 73  NRLPPDIQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L SLP+ L S L  +  + L  N+    P
Sbjct: 133 VLGLNDMSLTNLPPDFGSLEALQSLELRENLLRSLPESL-SQLFKLERLDLGDNEIEELP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
           +                  + K+P         L ++ +  N L  LP ++G    L  L
Sbjct: 192 A-----------------HVGKLPA--------LQELWLDHNQLQHLPPEIGELKTLACL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++  L  +I  L +L  L LS N+++KLP  +G L+KL  L +++N+L +L   I
Sbjct: 227 DVSENRLEDLPNEIGGLESLTDLHLSQNVIEKLPDGLGELKKLTILKVDQNRLSTLNPNI 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + LQ LIL  N L+ LP +IG L NL+ L+V  N++QS+P EIG L+ L  L L DN
Sbjct: 287 GRCENLQELILTENFLLELPVSIGKLHNLNNLNVDRNSVQSLPIEIGNLKKLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P E+  CS L ++ +    L  +P  ++
Sbjct: 347 K-LQYLPTEVGQCSALHVLDVSGNRLQYLPYSLI 379



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 172/359 (47%), Gaps = 28/359 (7%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  + I  LP +  +L  L +L L  N++  LP  I    NL  L ++ N +  +P+++ 
Sbjct: 44  LDANHIRDLPKNFFRLQRLRKLGLSDNEINRLPPDIQNFENLVELDVSRNDIPDIPENIK 103

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
           NL+ L+V D   N +  LP    +L +L +L L    +  + PD   L  L  L +R+N 
Sbjct: 104 NLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENL 163

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           +R LP  L +L  L  LDL  N +EELP  +G    L  L L HN+L ++P  +G L  L
Sbjct: 164 LRSLPESLSQLFKLERLDLGDNEIEELPAHVGKLPALQELWLDHNQLQHLPPEIGELKTL 223

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF-TA 346
             L +S NRLE +P  +     L + ++    +  LPDG L  L  +  + + +N+  T 
Sbjct: 224 ACLDVSENRLEDLPNEIGGLESLTDLHLSQNVIEKLPDG-LGELKKLTILKVDQNRLSTL 282

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+ G                          R +NL ++ + +N L  LP+ +G    L 
Sbjct: 283 NPNIG--------------------------RCENLQELILTENFLLELPVSIGKLHNLN 316

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            LN+  N +  L  +I NL  L VL L +N L+ LP+ +G    L  LD+  N+L+ LP
Sbjct: 317 NLNVDRNSVQSLPIEIGNLKKLGVLSLRDNKLQYLPTEVGQCSALHVLDVSGNRLQYLP 375



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 174/336 (51%), Gaps = 27/336 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P +++ L  L+      N +  LP+    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L+ L+ L+LR N L  LP  + +L  L+ L L  N I+ +   +  L  L  
Sbjct: 143 NLPPDFGSLEALQSLELRENLLRSLPESLSQLFKLERLDLGDNEIEELPAHVGKLPALQE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPE+GELK L  LD++ N LE+LP EIG    L  L L  N +  +PD 
Sbjct: 203 LWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPNEIGGLESLTDLHLSQNVIEKLPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           LG L  LT L++  NRL ++   + +C +L E  +    L  LP   +  L ++NN+ + 
Sbjct: 263 LGELKKLTILKVDQNRLSTLNPNIGRCENLQELILTENFLLELPVS-IGKLHNLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN              SV S+  E   + K+  G+ S         ++DN L  LP ++G
Sbjct: 322 RN--------------SVQSLPIEIGNLKKL--GVLS---------LRDNKLQYLPTEVG 356

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
               L  L++  N++  L   + NL +L+ + LS N
Sbjct: 357 QCSALHVLDVSGNRLQYLPYSLINL-SLKAVWLSEN 391


>gi|3894393|gb|AAC78596.1| Hcr2-5D [Solanum lycopersicum var. cerasiforme]
          Length = 1016

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 160/485 (32%), Positives = 240/485 (49%), Gaps = 63/485 (12%)

Query: 102 NILNLDLSKSSITH-LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSL 159
           N++ LDL+ + I+  +PP +  L  L+ + ++ N L   +P +IGY+ +LT L L  N L
Sbjct: 120 NLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNNHLNGFIPEEIGYLRSLTKLSLGINFL 179

Query: 160 T-SLPDSLANLQQLRVLDLRHNKL-------------------------NELPMVVYKLT 193
           + S+P SL N+  L  L L  N+L                           +P  +  L 
Sbjct: 180 SGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGYLRSLTKLSLDINFLSGSIPASLGNLN 239

Query: 194 SLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHL 251
           +L  LYL  N++    P+ I YL +L+ LS+  N +   +P  LG L NL  LDL +N L
Sbjct: 240 NLSFLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSRLDLYNNKL 299

Query: 252 E-ELPKEIGNCTMLVTLDLQHNEL-VNIPDMLGNLINLTRLRLSYNRLE-SVPETLSKCV 308
              +P+EIG    L  LDL  N L  +IP  LGNL NL  L L  N+L  S+PE +    
Sbjct: 300 SGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLR 359

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
            L   ++   AL+      L +L +++ + L  NK +                       
Sbjct: 360 SLTYLDLGENALNGSIPASLGNLNNLSRLDLYNNKLSG---------------------- 397

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLV 426
             IP  I    ++L+ +++ +N L  S+P  LG    L  L L  NQ+S  + E+I  L 
Sbjct: 398 -SIPEEI-GYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLS 455

Query: 427 NLEVLVLSNNLL-KKLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQL 484
           +L  L L NN L   +P+S+GNL  L  L L  N+L  S+P EIG+L  L  L L +N L
Sbjct: 456 SLTELYLGNNSLNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELFLGNNSL 515

Query: 485 -VSLPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
             S+P ++G+L NLS L +  N L  SIP   G + NL TL+L+DN  +  IP  +   +
Sbjct: 516 NGSIPASLGNLNNLSRLYLYNNQLSGSIPASFGNMRNLQTLFLSDNDLIGEIPSFVCNLT 575

Query: 543 NLQIM 547
           +L+++
Sbjct: 576 SLEVL 580



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 164/477 (34%), Positives = 247/477 (51%), Gaps = 24/477 (5%)

Query: 105 NLDLSKSSITH-LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS- 161
           NLDLS ++I+  +PP +  LT+L  L L  N++  ++P QIG +  L  + +  N L   
Sbjct: 99  NLDLSNNNISGTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNNHLNGF 158

Query: 162 LPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLS 219
           +P+ +  L+ L  L L  N L   +P  +  +T+L  L+L  N++    P+ I YL +L+
Sbjct: 159 IPEEIGYLRSLTKLSLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGYLRSLT 218

Query: 220 MLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN- 276
            LS+  N +   +P  LG L NL  L L +N L   +P+EIG    L  L L  N L   
Sbjct: 219 KLSLDINFLSGSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFLSGS 278

Query: 277 IPDMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCAL-SSLPDGLLSSLTSI 334
           IP  LGNL NL+RL L  N+L  S+PE +     L   ++   AL  S+P    +SL ++
Sbjct: 279 IPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIP----ASLGNL 334

Query: 335 NNI---TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
           NN+    L  N+ +           S+  ++   N ++           NLS++++ +N 
Sbjct: 335 NNLFMLYLYNNQLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLSRLDLYNNK 394

Query: 392 LT-SLPLDLGTWVGLTELNLGTNQI-SKLSEDIQNLVNLEVLVLSNNLLK-KLPSSIGNL 448
           L+ S+P ++G    LT L+LG N +   +   + NL NL +L L NN L   +P  IG L
Sbjct: 395 LSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYL 454

Query: 449 RKLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGENN 506
             L  L L  N L  S+P  +G L  L  L L +NQL  S+P  IG+L++L+ L +G N+
Sbjct: 455 SSLTELYLGNNSLNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELFLGNNS 514

Query: 507 LQ-SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL-DNCPLSQIPSEI 561
           L  SIP  +G L NL  LYL +N    +IP       NLQ + L DN  + +IPS +
Sbjct: 515 LNGSIPASLGNLNNLSRLYLYNNQLSGSIPASFGNMRNLQTLFLSDNDLIGEIPSFV 571



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 172/535 (32%), Positives = 264/535 (49%), Gaps = 52/535 (9%)

Query: 92  EKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLT 150
           E  +LR   +  L+++    SI   P S+  L +L  LYLY N+L  S+P +IGY+ +LT
Sbjct: 210 EIGYLRSLTKLSLDINFLSGSI---PASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLT 266

Query: 151 CLGLAENSLT-SLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTV 208
            L L  N L+ S+P SL NL  L  LDL +NKL   +P  +  L SL  L L  N +   
Sbjct: 267 KLSLGINFLSGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGS 326

Query: 209 HP-DIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLV 265
            P  +  L+NL ML + +N++   +P E+G L++L  LDL  N L   +P  +GN   L 
Sbjct: 327 IPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLS 386

Query: 266 TLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALS-S 322
            LDL +N+L   IP+ +G L +LT L L  N L  S+P +L    +L    +    LS S
Sbjct: 387 RLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGS 446

Query: 323 LPD--GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID-KIPYGIFSRA 379
           +P+  G LSSLT +    L  N              +++ +   +NQ+   IP  I    
Sbjct: 447 IPEEIGYLSSLTEL---YLGNNSLNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEI-GYL 502

Query: 380 KNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVLSNN- 436
            +L+++ + +N L  S+P  LG    L+ L L  NQ+S  +     N+ NL+ L LS+N 
Sbjct: 503 SSLTELFLGNNSLNGSIPASLGNLNNLSRLYLYNNQLSGSIPASFGNMRNLQTLFLSDND 562

Query: 437 LLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHL 494
           L+ ++PS + NL  L+ L +  N L+  +P  +G + +L  L + SN     LP +I +L
Sbjct: 563 LIGEIPSFVCNLTSLEVLYMSRNNLKGKVPQCLGNISDLHILSMSSNSFRGELPSSISNL 622

Query: 495 TNLSYLSVGENNLQ-SIPEEIGTLENLH------------------------TLYLNDNT 529
           T+L  L  G NNL+ +IP+  G + +L                         +L L+ N 
Sbjct: 623 TSLKILDFGRNNLEGAIPQFFGNISSLQVFDMQNNKLSGTLPTNFSIGCSLISLNLHGNE 682

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYL---KMQGPYRT 581
             + IP  L  C  LQ++ L +  L+      +   P L +  L   K+ GP R+
Sbjct: 683 LADEIPRSLDNCKKLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNKLHGPIRS 737



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 153/456 (33%), Positives = 224/456 (49%), Gaps = 73/456 (16%)

Query: 146 VTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNR 204
           +TN + +G    +L + P   ++L  L  LDL +N +   +P  +  LT+L  L L  N+
Sbjct: 77  ITNASVIG----TLYAFP--FSSLPFLENLDLSNNNISGTIPPEIGNLTNLVYLDLNTNQ 130

Query: 205 IK-TVHPDIQYLSNLSMLSMRDNKIRE-LPPELGELKNLVTLDLAHNHLE-ELPKEIGNC 261
           I  T+ P I  L+ L ++ + +N +   +P E+G L++L  L L  N L   +P  +GN 
Sbjct: 131 ISGTIPPQIGSLAKLQIIRIFNNHLNGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNM 190

Query: 262 TMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCA 319
           T L  L L  N+L   IP+ +G L +LT+L L  N L  S+P +L    +L+   +    
Sbjct: 191 TNLSFLFLYENQLSGFIPEEIGYLRSLTKLSLDINFLSGSIPASLGNLNNLSFLYLYNNQ 250

Query: 320 LS-SLPD--GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIF 376
           LS S+P+  G L SLT ++                         INF    I        
Sbjct: 251 LSGSIPEEIGYLRSLTKLS-----------------------LGINFLSGSIPAS----L 283

Query: 377 SRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQI-SKLSEDIQNLVNLEVLVLS 434
               NLS++++ +N L+ S+P ++G    LT L+LG N +   +   + NL NL +L L 
Sbjct: 284 GNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLY 343

Query: 435 NNLLK-KLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQLV-SLPRAI 491
           NN L   +P  IG LR L  LDL EN L  S+P  +G L  L RL L +N+L  S+P  I
Sbjct: 344 NNQLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLSRLDLYNNKLSGSIPEEI 403

Query: 492 GHLTNLSYLSVGENNLQ-------------------------SIPEEIGTLENLHTLYLN 526
           G+L +L+YL +GEN L                          SIPEEIG L +L  LYL 
Sbjct: 404 GYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELYLG 463

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLS-QIPSEI 561
           +N+   +IP  L   +NL ++ L N  LS  IP EI
Sbjct: 464 NNSLNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEI 499



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 151/486 (31%), Positives = 250/486 (51%), Gaps = 52/486 (10%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLT-SL 162
           LDL ++++   +P S+  L +L  LYLY N+L  S+P +IGY+++LT L L  NSL  S+
Sbjct: 412 LDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELYLGNNSLNGSI 471

Query: 163 PDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSM 220
           P SL NL  L +L L +N+L   +P  +  L+SL  L+L  N +    P  +  L+NLS 
Sbjct: 472 PASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELFLGNNSLNGSIPASLGNLNNLSR 531

Query: 221 LSMRDNKIR-ELPPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNELVN-I 277
           L + +N++   +P   G ++NL TL L+ N L  E+P  + N T L  L +  N L   +
Sbjct: 532 LYLYNNQLSGSIPASFGNMRNLQTLFLSDNDLIGEIPSFVCNLTSLEVLYMSRNNLKGKV 591

Query: 278 PDMLGNLINLTRLRLSYNRLES-VPETLS-----KCVHLNEFNVEGCALSSLPDGLLSSL 331
           P  LGN+ +L  L +S N     +P ++S     K +     N+EG    ++P     ++
Sbjct: 592 PQCLGNISDLHILSMSSNSFRGELPSSISNLTSLKILDFGRNNLEG----AIPQ-FFGNI 646

Query: 332 TSINNITLSRNKFTAYPSGGPTQFT---SVYSINFEHNQI-DKIPYGIFSRAKNLSKVNM 387
           +S+    +  NK +      PT F+   S+ S+N   N++ D+IP  +    K L  +++
Sbjct: 647 SSLQVFDMQNNKLSGTL---PTNFSIGCSLISLNLHGNELADEIPRSL-DNCKKLQVLDL 702

Query: 388 KDNLLT-SLPLDLGTWVGLTELNLGTNQ----ISKLSEDIQNLVNLEVLVLSNNLLKK-L 441
            DN L  + P+ LGT   L  L L +N+    I     +I    +L ++ LS N   + L
Sbjct: 703 GDNQLNDTFPMWLGTLPELRVLRLTSNKLHGPIRSSGAEIM-FPDLRIIDLSRNAFSQDL 761

Query: 442 PSSIG-NLRKLKCLD--LEENKLESLPNEI------GFLKELQRLI-------LQSNQLV 485
           P+S+  +L+ ++ +D  +EE   ES  ++       G   E+ R++       L SN+  
Sbjct: 762 PTSLFEHLKGMRTVDKTMEEPSYESYYDDSVVVVTKGLELEIVRILSLYTIIDLSSNKFE 821

Query: 486 S-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
             +P  +G L  +  L+V  N LQ  IP  +G+L  L +L L+ N     IP +LA  + 
Sbjct: 822 GHIPSVLGDLIAIRVLNVSHNALQGYIPSSLGSLSILESLDLSFNQLSGEIPQQLASLTF 881

Query: 544 LQIMSL 549
           L++++L
Sbjct: 882 LEVLNL 887


>gi|359459073|ref|ZP_09247636.1| GTPase [Acaryochloris sp. CCMEE 5410]
          Length = 1082

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 179/317 (56%), Gaps = 3/317 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS   +T++P ++ KL +L  + L  N+L S+P ++  +  LT L L+ N LTSLP  
Sbjct: 19  LYLSDEDLTNVPLALAKLDNLTLISLSNNQLTSVPPELAQLRKLTALDLSNNQLTSLPPE 78

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           LA L+ L +L L +N+   +P+ +  L +L+ L    N++ +V P++ +L NL+ L +RD
Sbjct: 79  LAQLKNLTLLYLSNNQFTNIPLELTHLVNLRELDCHSNQLTSVPPELAHLENLNKLDLRD 138

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  +PPEL  L+NL  L L+ N L  +P+E+     L  L L  N+L  +P  L +L 
Sbjct: 139 NQLTSVPPELAHLENLKELYLSANQLTHIPQELAQLRNLTLLSLSANQLTGVPPALAHLE 198

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L  N+L S+P  L+   +L E  +    L ++P   L+ L  +  ++LS N+ T
Sbjct: 199 NLEVLSLRTNQLTSLPPELAHLANLRELYLRSNKLINVPPE-LAHLEHLTLLSLSYNQLT 257

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P     Q  ++  ++   NQ+  +P   F++ KNL+ + ++ N L +LP +      L
Sbjct: 258 SLPPEF-AQLKNLKELHLSGNQLTSLPPE-FAQLKNLTWLYLRSNQLANLPPEFAQLKNL 315

Query: 406 TELNLGTNQISKLSEDI 422
           TEL+L  NQ+S +S +I
Sbjct: 316 TELDLRDNQLSNISPEI 332



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 174/350 (49%), Gaps = 26/350 (7%)

Query: 119 SVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLR 178
            +E+     ELYL    L ++P  +  + NLT + L+ N LTS+P  LA L++L  LDL 
Sbjct: 9   QLEQAKQTGELYLSDEDLTNVPLALAKLDNLTLISLSNNQLTSVPPELAQLRKLTALDLS 68

Query: 179 HNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGEL 238
           +N+L  LP  + +L +L +LYL  N+   +  ++ +L NL  L    N++  +PPEL  L
Sbjct: 69  NNQLTSLPPELAQLKNLTLLYLSNNQFTNIPLELTHLVNLRELDCHSNQLTSVPPELAHL 128

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           +NL  LDL  N L  +P E+ +   L  L L  N+L +IP  L  L NLT L LS N+L 
Sbjct: 129 ENLNKLDLRDNQLTSVPPELAHLENLKELYLSANQLTHIPQELAQLRNLTLLSLSANQLT 188

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
            VP  L+   +L   ++    L+SLP   L+ L ++  + L  NK    P          
Sbjct: 189 GVPPALAHLENLEVLSLRTNQLTSLPPE-LAHLANLRELYLRSNKLINVPPE-------- 239

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
                             +  ++L+ +++  N LTSLP +      L EL+L  NQ++ L
Sbjct: 240 -----------------LAHLEHLTLLSLSYNQLTSLPPEFAQLKNLKELHLSGNQLTSL 282

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
             +   L NL  L L +N L  LP     L+ L  LDL +N+L ++  EI
Sbjct: 283 PPEFAQLKNLTWLYLRSNQLANLPPEFAQLKNLTELDLRDNQLSNISPEI 332



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 180/355 (50%), Gaps = 26/355 (7%)

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
            +L   L   +Q   L L    L  +P+ + KL +L ++ L  N++ +V P++  L  L+
Sbjct: 4   VTLQRQLEQAKQTGELYLSDEDLTNVPLALAKLDNLTLISLSNNQLTSVPPELAQLRKLT 63

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
            L + +N++  LPPEL +LKNL  L L++N    +P E+ +   L  LD   N+L ++P 
Sbjct: 64  ALDLSNNQLTSLPPELAQLKNLTLLYLSNNQFTNIPLELTHLVNLRELDCHSNQLTSVPP 123

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            L +L NL +L L  N+L SVP  L+   +L E  +    L+ +P   L+ L ++  ++L
Sbjct: 124 ELAHLENLNKLDLRDNQLTSVPPELAHLENLKELYLSANQLTHIPQE-LAQLRNLTLLSL 182

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           S N+ T  P                            +  +NL  ++++ N LTSLP +L
Sbjct: 183 SANQLTGVPPA-------------------------LAHLENLEVLSLRTNQLTSLPPEL 217

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
                L EL L +N++  +  ++ +L +L +L LS N L  LP     L+ LK L L  N
Sbjct: 218 AHLANLRELYLRSNKLINVPPELAHLEHLTLLSLSYNQLTSLPPEFAQLKNLKELHLSGN 277

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           +L SLP E   LK L  L L+SNQL +LP     L NL+ L + +N L +I  EI
Sbjct: 278 QLTSLPPEFAQLKNLTWLYLRSNQLANLPPEFAQLKNLTELDLRDNQLSNISPEI 332



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 177/332 (53%), Gaps = 25/332 (7%)

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           L L   +L N+P  L  L NLT + LS N+L SVP  L++   L   ++    L+SLP  
Sbjct: 19  LYLSDEDLTNVPLALAKLDNLTLISLSNNQLTSVPPELAQLRKLTALDLSNNQLTSLPPE 78

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
           L + L ++  + LS N+FT  P    T   ++  ++   NQ+  +P  + +  +NL+K++
Sbjct: 79  L-AQLKNLTLLYLSNNQFTNIPLEL-THLVNLRELDCHSNQLTSVPPEL-AHLENLNKLD 135

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           ++DN LTS+P +L     L EL L  NQ++ + +++  L NL +L LS N L  +P ++ 
Sbjct: 136 LRDNQLTSVPPELAHLENLKELYLSANQLTHIPQELAQLRNLTLLSLSANQLTGVPPALA 195

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
           +L  L+ L L  N+L SLP E+  L  L+ L L+SN+L+++P  + HL +L+ LS+  N 
Sbjct: 196 HLENLEVLSLRTNQLTSLPPELAHLANLRELYLRSNKLINVPPELAHLEHLTLLSLSYNQ 255

Query: 507 LQSIPEEIGTLENLHTLYLNDNTC----------------------LNNIPFELALCSNL 544
           L S+P E   L+NL  L+L+ N                        L N+P E A   NL
Sbjct: 256 LTSLPPEFAQLKNLKELHLSGNQLTSLPPEFAQLKNLTWLYLRSNQLANLPPEFAQLKNL 315

Query: 545 QIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
             + L +  LS I  EI+  G + I+ +L+ Q
Sbjct: 316 TELDLRDNQLSNISPEILAQGTAAILGHLQEQ 347



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/207 (41%), Positives = 127/207 (61%), Gaps = 1/207 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN+  LDL  + +T +PP +  L +L+ELYL  N+L  +P ++  + NLT L L+ N LT
Sbjct: 129 ENLNKLDLRDNQLTSVPPELAHLENLKELYLSANQLTHIPQELAQLRNLTLLSLSANQLT 188

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            +P +LA+L+ L VL LR N+L  LP  +  L +L+ LYLR N++  V P++ +L +L++
Sbjct: 189 GVPPALAHLENLEVLSLRTNQLTSLPPELAHLANLRELYLRSNKLINVPPELAHLEHLTL 248

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+  N++  LPPE  +LKNL  L L+ N L  LP E      L  L L+ N+L N+P  
Sbjct: 249 LSLSYNQLTSLPPEFAQLKNLKELHLSGNQLTSLPPEFAQLKNLTWLYLRSNQLANLPPE 308

Query: 281 LGNLINLTRLRLSYNRLESV-PETLSK 306
              L NLT L L  N+L ++ PE L++
Sbjct: 309 FAQLKNLTELDLRDNQLSNISPEILAQ 335



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 133/232 (57%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  LD   + +T +PP +  L +L +L L  N+L S+P ++ ++ NL  L L+ N LT 
Sbjct: 107 NLRELDCHSNQLTSVPPELAHLENLNKLDLRDNQLTSVPPELAHLENLKELYLSANQLTH 166

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P  LA L+ L +L L  N+L  +P  +  L +L++L LR N++ ++ P++ +L+NL  L
Sbjct: 167 IPQELAQLRNLTLLSLSANQLTGVPPALAHLENLEVLSLRTNQLTSLPPELAHLANLREL 226

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +R NK+  +PPEL  L++L  L L++N L  LP E      L  L L  N+L ++P   
Sbjct: 227 YLRSNKLINVPPELAHLEHLTLLSLSYNQLTSLPPEFAQLKNLKELHLSGNQLTSLPPEF 286

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
             L NLT L L  N+L ++P   ++  +L E ++    LS++   +L+  T+
Sbjct: 287 AQLKNLTWLYLRSNQLANLPPEFAQLKNLTELDLRDNQLSNISPEILAQGTA 338



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 137/245 (55%), Gaps = 1/245 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L LS +  T++P  +  L +L EL  + N+L S+P ++ ++ NL  L L +N LT
Sbjct: 83  KNLTLLYLSNNQFTNIPLELTHLVNLRELDCHSNQLTSVPPELAHLENLNKLDLRDNQLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           S+P  LA+L+ L+ L L  N+L  +P  + +L +L +L L  N++  V P + +L NL +
Sbjct: 143 SVPPELAHLENLKELYLSANQLTHIPQELAQLRNLTLLSLSANQLTGVPPALAHLENLEV 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           LS+R N++  LPPEL  L NL  L L  N L  +P E+ +   L  L L +N+L ++P  
Sbjct: 203 LSLRTNQLTSLPPELAHLANLRELYLRSNKLINVPPELAHLEHLTLLSLSYNQLTSLPPE 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
              L NL  L LS N+L S+P   ++  +L    +    L++LP    + L ++  + L 
Sbjct: 263 FAQLKNLKELHLSGNQLTSLPPEFAQLKNLTWLYLRSNQLANLPPE-FAQLKNLTELDLR 321

Query: 341 RNKFT 345
            N+ +
Sbjct: 322 DNQLS 326



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 71/134 (52%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L L  + + ++PP +  L HL  L L  N+L SLP +   + NL  L L+ N LTS
Sbjct: 222 NLRELYLRSNKLINVPPELAHLEHLTLLSLSYNQLTSLPPEFAQLKNLKELHLSGNQLTS 281

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP   A L+ L  L LR N+L  LP    +L +L  L LR N++  + P+I      ++L
Sbjct: 282 LPPEFAQLKNLTWLYLRSNQLANLPPEFAQLKNLTELDLRDNQLSNISPEILAQGTAAIL 341

Query: 222 SMRDNKIRELPPEL 235
                +++E+ P+ 
Sbjct: 342 GHLQEQLQEVRPQW 355



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 73/119 (61%), Gaps = 4/119 (3%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E++  L LS + +T LPP   +L +L+EL+L GN+L SLP +   + NLT L L  N L 
Sbjct: 244 EHLTLLSLSYNQLTSLPPEFAQLKNLKELHLSGNQLTSLPPEFAQLKNLTWLYLRSNQLA 303

Query: 161 SLPDSLANLQQLRVLDLRHNKLNEL-PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           +LP   A L+ L  LDLR N+L+ + P ++ + T+  + +L+  +++ V P  Q++S +
Sbjct: 304 NLPPEFAQLKNLTELDLRDNQLSNISPEILAQGTAAILGHLQ-EQLQEVRP--QWISKM 359



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 1/91 (1%)

Query: 472 KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
           K+   L L    L ++P A+  L NL+ +S+  N L S+P E+  L  L  L L++N  L
Sbjct: 14  KQTGELYLSDEDLTNVPLALAKLDNLTLISLSNNQLTSVPPELAQLRKLTALDLSNNQ-L 72

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
            ++P ELA   NL ++ L N   + IP E+ 
Sbjct: 73  TSLPPELAQLKNLTLLYLSNNQFTNIPLELT 103


>gi|348522608|ref|XP_003448816.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Oreochromis niloticus]
          Length = 597

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 155/515 (30%), Positives = 249/515 (48%), Gaps = 67/515 (13%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL  + ++ LP ++ +L +L++L L  N+L SLP ++  + NL  L L +N L +LP+ 
Sbjct: 107 LDLHDNQLSSLPSALGELQNLQQLRLSHNQLHSLPVEMCTLENLRSLTLQQNLLENLPED 166

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L  L  L  LD+  N+L  LP     L SL+ + L  N++  +   +  L+N+ +L   D
Sbjct: 167 LGQLVNLTELDVSSNQLKSLPSSFGCLVSLQKVNLCHNQLSGLPDSLARLTNVKLLDCSD 226

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPK---------EIGN------------CTML 264
           N++ E+P  L E+  L  L L HN L  LPK          +GN            C   
Sbjct: 227 NQLTEIPASLSEMLALEQLYLRHNKLRLLPKLPAPALKELYVGNNQIEQLQTEQLSCLSA 286

Query: 265 VTL-DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSL 323
           ++L +L++N++  +P+ +  L  LTRL L+ N + S+P +LS   +LN   +EG  L  +
Sbjct: 287 ISLLELRNNKIKIVPEEITLLSTLTRLDLTNNDITSLPASLSLLPNLNVLLLEGNPLRGI 346

Query: 324 PDGLLSSLTSINNITLSRNKFTAYP---SGGPTQF-------TSVYSIN------FEHNQ 367
              +LS  T    +   R +    P    GG T          +V+ I       +   Q
Sbjct: 347 RRDILSKGTG-ELLKYLRGRVKEEPEKTDGGDTAMMLPSQARVNVHDIKTLKLLAYSDKQ 405

Query: 368 IDKIPYGIFSRA--KNLSKVNMKDNLLTSLPLDLGTW-VGLTELNLGTNQISKLSEDIQN 424
              IP  +F  A  ++++ VN   N LTS+P  L  +   L+E+NLG N++   S DI  
Sbjct: 406 AGSIPEELFDAAADQSIATVNFSKNQLTSVPPRLLEFQSSLSEINLGFNRLISCSPDICK 465

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           L+ L  + L NN L  LPS + NL KL+ + L  N+ +S P+ +     L+ ++L +NQ+
Sbjct: 466 LLQLTHIDLRNNQLSDLPSEMQNLTKLRSIILIYNRFKSFPDVLYETLSLETILLANNQV 525

Query: 485 VSL-PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
             + P  +  LT+LS L +  N+L                         NIP EL LC+ 
Sbjct: 526 CEVDPSRLMKLTHLSTLDLANNDLL------------------------NIPPELGLCTT 561

Query: 544 LQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGP 578
           L+ +SL+  P     + IV  G   ++ YL+ + P
Sbjct: 562 LRCLSLEGNPFRTPRAAIVAKGTDALMEYLRSRIP 596



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/277 (34%), Positives = 141/277 (50%), Gaps = 29/277 (10%)

Query: 190 YKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHN 249
           ++ T L  L L  N+I  +  DI+ L  L+ L + DN++  LP  LGEL+NL  L L+HN
Sbjct: 76  WEQTDLTKLLLSSNQITLLSDDIRLLPGLTTLDLHDNQLSSLPSALGELQNLQQLRLSHN 135

Query: 250 HLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVH 309
            L  LP E+     L +L LQ N L N+P+ LG L+NLT L +S N+L+S+P +    V 
Sbjct: 136 QLHSLPVEMCTLENLRSLTLQQNLLENLPEDLGQLVNLTELDVSSNQLKSLPSSFGCLVS 195

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
           L + N+    LS LPD  L+ LT++  +  S N+ T  P+   ++  ++  +   HN++ 
Sbjct: 196 LQKVNLCHNQLSGLPDS-LARLTNVKLLDCSDNQLTEIPA-SLSEMLALEQLYLRHNKL- 252

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL-SEDIQNLVNL 428
                                LL  LP        L EL +G NQI +L +E +  L  +
Sbjct: 253 --------------------RLLPKLPAP-----ALKELYVGNNQIEQLQTEQLSCLSAI 287

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            +L L NN +K +P  I  L  L  LDL  N + SLP
Sbjct: 288 SLLELRNNKIKIVPEEITLLSTLTRLDLTNNDITSLP 324



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 169/332 (50%), Gaps = 7/332 (2%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L+L+   L+E+P+ +    +    + Q N      D      +LT+L LS N++  + + 
Sbjct: 38  LNLSGRGLKEVPQNVFRLNIDTPEEAQQNVSFGAADRWWEQTDLTKLLLSSNQITLLSDD 97

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           +     L   ++    LSSLP   L  L ++  + LS N+  + P    T   ++ S+  
Sbjct: 98  IRLLPGLTTLDLHDNQLSSLPSA-LGELQNLQQLRLSHNQLHSLPVEMCT-LENLRSLTL 155

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
           + N ++ +P  +  +  NL+++++  N L SLP   G  V L ++NL  NQ+S L + + 
Sbjct: 156 QQNLLENLPEDL-GQLVNLTELDVSSNQLKSLPSSFGCLVSLQKVNLCHNQLSGLPDSLA 214

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
            L N+++L  S+N L ++P+S+  +  L+ L L  NKL  LP        L+ L + +NQ
Sbjct: 215 RLTNVKLLDCSDNQLTEIPASLSEMLALEQLYLRHNKLRLLPKLPA--PALKELYVGNNQ 272

Query: 484 LVSL-PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           +  L    +  L+ +S L +  N ++ +PEEI  L  L  L L +N  + ++P  L+L  
Sbjct: 273 IEQLQTEQLSCLSAISLLELRNNKIKIVPEEITLLSTLTRLDLTNND-ITSLPASLSLLP 331

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
           NL ++ L+  PL  I  +I+  G   +++YL+
Sbjct: 332 NLNVLLLEGNPLRGIRRDILSKGTGELLKYLR 363



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 86/160 (53%), Gaps = 2/160 (1%)

Query: 92  EKEFLRCKEENILNLDLSKSSITHLPPSV-EKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           E+ F    +++I  ++ SK+ +T +PP + E  + L E+ L  N+L S    I  +  LT
Sbjct: 411 EELFDAAADQSIATVNFSKNQLTSVPPRLLEFQSSLSEINLGFNRLISCSPDICKLLQLT 470

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            + L  N L+ LP  + NL +LR + L +N+    P V+Y+  SL+ + L  N++  V P
Sbjct: 471 HIDLRNNQLSDLPSEMQNLTKLRSIILIYNRFKSFPDVLYETLSLETILLANNQVCEVDP 530

Query: 211 D-IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHN 249
             +  L++LS L + +N +  +PPELG    L  L L  N
Sbjct: 531 SRLMKLTHLSTLDLANNDLLNIPPELGLCTTLRCLSLEGN 570


>gi|327403778|ref|YP_004344616.1| adenylate cyclase [Fluviicola taffensis DSM 16823]
 gi|327319286|gb|AEA43778.1| Adenylate cyclase [Fluviicola taffensis DSM 16823]
          Length = 540

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 218/438 (49%), Gaps = 23/438 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS + I  LP S   LT L+EL L  N L+SL   IG +  L  L L+ N L +LP  
Sbjct: 91  LDLSGNKIGTLPNSFWSLTSLKELSLSKNDLSSLSGLIGTLNQLVSLELSGNRLNTLPRE 150

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L QL+ +DL +N L+ LP    +L  L+ +++  NRI  V      L  L ++   +
Sbjct: 151 IGLLTQLKKIDLTNNNLSSLPKSFGELKDLEEIFIAHNRISKVSKSWCRLRQLKIMDAGN 210

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++++LP ++ +L+ L  L L  N L  LPK  G    L  + LQHN L  +P+    L 
Sbjct: 211 NRLKKLPNQIVQLQLLSVLLLDSNQLVCLPKSFGQLENLSGIYLQHNSLKLLPESFTKLH 270

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            +T L +S NR+  +  +LS+  +L +       LS+LPD  +  + ++  + L  N+F+
Sbjct: 271 LITSLEISENRITRLLSSLSEMRNLRQIYASNNLLSTLPDS-IEKMKTLMIVKLDHNQFS 329

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD------- 398
            +P     +  S+  ++ + N +  +P        +LS  N+ D  L   P+        
Sbjct: 330 TFPE-SLLKSKSIIVLDLQQNGLKHVP------ELHLSMTNLADLYLDQFPISEAIKEIK 382

Query: 399 LGTWVG--------LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
           L T +         +  L+L   ++ +L E   +L  L  L L+ N L +LP S  +L K
Sbjct: 383 LYTSIDSALKYANEVYRLDLSYQKLQRLPESFGSLSELRWLNLNYNRLSELPESFKDLNK 442

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           LK L +  N LE++ + I +L  L+ L L  N+L  +P  I  L NL   ++ +N ++ +
Sbjct: 443 LKSLSIVANGLETIDSAICYLDALEELQLNGNKLSFVPDCIVQLNNLETFNLQQNYIEQL 502

Query: 511 PEEIGTLENLHTLYLNDN 528
           P+    L+NL TL L  N
Sbjct: 503 PDSFFELKNLKTLILYGN 520



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 141/501 (28%), Positives = 220/501 (43%), Gaps = 38/501 (7%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           F+     N LN  + K   + L  +++    +  L L G+ L   PS I  + NL  L L
Sbjct: 12  FILYASSNTLNAQIKKIYYS-LEEALKNKDQVYHLSLKGHVLNEFPSSIFEMKNLRSLNL 70

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
           + N++  +PDS+  L  +  LDL  NK+  LP   + LTSLK L L  N + ++   I  
Sbjct: 71  SNNNIKYIPDSIQLLPMIEYLDLSGNKIGTLPNSFWSLTSLKELSLSKNDLSSLSGLIGT 130

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L+ L  L +  N++  LP E+G L  L  +DL +N+L  LPK  G    L  + + HN +
Sbjct: 131 LNQLVSLELSGNRLNTLPREIGLLTQLKKIDLTNNNLSSLPKSFGELKDLEEIFIAHNRI 190

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +      L  L  +    NRL+ +P  + +   L+   ++   L  LP      L ++
Sbjct: 191 SKVSKSWCRLRQLKIMDAGNNRLKKLPNQIVQLQLLSVLLLDSNQLVCLPKS-FGQLENL 249

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
           + I L  N     P    T+   + S+    N+I ++   + S  +NL ++   +NLL++
Sbjct: 250 SGIYLQHNSLKLLPESF-TKLHLITSLEISENRITRLLSSL-SEMRNLRQIYASNNLLST 307

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS---SIGNLRKL 451
           LP  +     L  + L  NQ S   E +    ++ VL L  N LK +P    S+ NL  L
Sbjct: 308 LPDSIEKMKTLMIVKLDHNQFSTFPESLLKSKSIIVLDLQQNGLKHVPELHLSMTNLADL 367

Query: 452 KC------------------------------LDLEENKLESLPNEIGFLKELQRLILQS 481
                                           LDL   KL+ LP   G L EL+ L L  
Sbjct: 368 YLDQFPISEAIKEIKLYTSIDSALKYANEVYRLDLSYQKLQRLPESFGSLSELRWLNLNY 427

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           N+L  LP +   L  L  LS+  N L++I   I  L+ L  L LN N  L+ +P  +   
Sbjct: 428 NRLSELPESFKDLNKLKSLSIVANGLETIDSAICYLDALEELQLNGNK-LSFVPDCIVQL 486

Query: 542 SNLQIMSLDNCPLSQIPSEIV 562
           +NL+  +L    + Q+P    
Sbjct: 487 NNLETFNLQQNYIEQLPDSFF 507



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 10/186 (5%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLA----------SLPSQIGYVTN 148
           K ++I+ LDL ++ + H+P     +T+L +LYL    ++          S+ S + Y   
Sbjct: 337 KSKSIIVLDLQQNGLKHVPELHLSMTNLADLYLDQFPISEAIKEIKLYTSIDSALKYANE 396

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           +  L L+   L  LP+S  +L +LR L+L +N+L+ELP     L  LK L +  N ++T+
Sbjct: 397 VYRLDLSYQKLQRLPESFGSLSELRWLNLNYNRLSELPESFKDLNKLKSLSIVANGLETI 456

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
              I YL  L  L +  NK+  +P  + +L NL T +L  N++E+LP        L TL 
Sbjct: 457 DSAICYLDALEELQLNGNKLSFVPDCIVQLNNLETFNLQQNYIEQLPDSFFELKNLKTLI 516

Query: 269 LQHNEL 274
           L  N L
Sbjct: 517 LYGNNL 522


>gi|297835450|ref|XP_002885607.1| hypothetical protein ARALYDRAFT_479903 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331447|gb|EFH61866.1| hypothetical protein ARALYDRAFT_479903 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1140

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 144/459 (31%), Positives = 223/459 (48%), Gaps = 58/459 (12%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS--LPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQL 172
           +P  + KL+ LE + + GNK  S  +P +IG  +NLT LGLAE S++  LP SL  L++L
Sbjct: 191 IPLELGKLSGLEVIRIGGNKEISGQIPPEIGDCSNLTVLGLAETSVSGNLPSSLGKLKKL 250

Query: 173 RVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
           + L +    +  E+P  +   + L  L+L  N +                         +
Sbjct: 251 QTLSIYTTMISGEIPSDLGNCSELVDLFLYENSLSG----------------------SI 288

Query: 232 PPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTR 289
           P E+G+L  L  L L  N L   +P+EIGNC+ L  +DL  N L   IP  +G L  L  
Sbjct: 289 PREIGKLSKLEQLFLWQNSLVGGIPEEIGNCSNLKMIDLSLNLLSGSIPTSIGRLSFLEE 348

Query: 290 LRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
             +S N++  S+P T+S C  L +  ++   +S L    L +LT +       N+     
Sbjct: 349 FMISDNKISGSIPTTISNCSSLVQLQLDKNQISGLIPSELGTLTKLTLFFAWSNQLEGSI 408

Query: 349 SGGPTQFTSVYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLLTS-LPLDLGTWVGLT 406
             G  + T + +++   N +   IP G+F   +NL+K+ +  N L+  +P ++G    L 
Sbjct: 409 PPGLAECTDLQALDLSRNSLTGTIPSGLF-MLRNLTKLLLISNSLSGFIPQEIGNCSSLV 467

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES-LP 465
            L LG N+I+                       ++PS IG+L+KL  LD   N+L   +P
Sbjct: 468 RLRLGFNRITG----------------------EIPSGIGSLKKLNFLDFSSNRLHGKVP 505

Query: 466 NEIGFLKELQRLILQSNQL-VSLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTL 523
           +EIG   ELQ + L +N L  SLP  +  L+ L  L V  N     IP  +G L +L+ L
Sbjct: 506 DEIGSCSELQMIDLSNNSLEGSLPNPVSSLSGLQVLDVSANQFSGKIPASLGRLVSLNKL 565

Query: 524 YLNDNTCLNNIPFELALCSNLQIMSLDNCPLS-QIPSEI 561
            L+ N    +IP  L +CS LQ++ L +  LS +IPSE+
Sbjct: 566 ILSKNLFSGSIPTSLGMCSGLQLLDLGSNELSGEIPSEL 604



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 124/411 (30%), Positives = 203/411 (49%), Gaps = 65/411 (15%)

Query: 91  IEKEFLRCKEENILNLDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTN 148
           I  +   C E  +++L L ++S++  +P  + KL+ LE+L+L+ N L   +P +IG  +N
Sbjct: 264 IPSDLGNCSE--LVDLFLYENSLSGSIPREIGKLSKLEQLFLWQNSLVGGIPEEIGNCSN 321

Query: 149 LTCLGLAENSLT-SLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIK 206
           L  + L+ N L+ S+P S+  L  L    +  NK+   +P  +   +SL  L L  N+I 
Sbjct: 322 LKMIDLSLNLLSGSIPTSIGRLSFLEEFMISDNKISGSIPTTISNCSSLVQLQLDKNQIS 381

Query: 207 TVHP-DIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLEE----------- 253
            + P ++  L+ L++     N++   +PP L E  +L  LDL+ N L             
Sbjct: 382 GLIPSELGTLTKLTLFFAWSNQLEGSIPPGLAECTDLQALDLSRNSLTGTIPSGLFMLRN 441

Query: 254 --------------LPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE 298
                         +P+EIGNC+ LV L L  N +   IP  +G+L  L  L  S NRL 
Sbjct: 442 LTKLLLISNSLSGFIPQEIGNCSSLVRLRLGFNRITGEIPSGIGSLKKLNFLDFSSNRLH 501

Query: 299 S-VPETLSKCVHLNEFNVEGCAL-SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFT 356
             VP+ +  C  L   ++   +L  SLP+ + SSL+ +  + +S N+F+           
Sbjct: 502 GKVPDEIGSCSELQMIDLSNNSLEGSLPNPV-SSLSGLQVLDVSANQFSG---------- 550

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQI 415
                        KIP  +  R  +L+K+ +  NL + S+P  LG   GL  L+LG+N++
Sbjct: 551 -------------KIPASL-GRLVSLNKLILSKNLFSGSIPTSLGMCSGLQLLDLGSNEL 596

Query: 416 S-KLSEDIQNLVNLEVLV--LSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           S ++  ++ ++ NLE+ +   SN L  K+PS I +L KL  LDL  N LE 
Sbjct: 597 SGEIPSELGDIENLEIALNLSSNRLTGKIPSKIASLNKLSILDLSHNMLEG 647



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 169/346 (48%), Gaps = 15/346 (4%)

Query: 231 LPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELV-NIPDMLGNLINLT 288
           LP  L  L++L  L ++  +L   LP+ +G+C  L  LDL  N LV +IP  L  L NL 
Sbjct: 95  LPKNLPALRSLQKLTISGANLTGTLPESLGDCLGLTVLDLSSNGLVGDIPWSLSKLRNLE 154

Query: 289 RLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            L L+ N+L   +P  +SKC+ L    +    L+      L  L+ +  I +  NK  + 
Sbjct: 155 TLILNSNQLTGKIPPDISKCLKLKSLILFDNLLTGPIPLELGKLSGLEVIRIGGNKEISG 214

Query: 348 ---PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS-LPLDLGTWV 403
              P  G     +V  +  E +    +P  +  + K L  +++   +++  +P DLG   
Sbjct: 215 QIPPEIGDCSNLTVLGLA-ETSVSGNLPSSL-GKLKKLQTLSIYTTMISGEIPSDLGNCS 272

Query: 404 GLTELNLGTNQIS-KLSEDIQNLVNLEVLVL-SNNLLKKLPSSIGNLRKLKCLDLEENKL 461
            L +L L  N +S  +  +I  L  LE L L  N+L+  +P  IGN   LK +DL  N L
Sbjct: 273 ELVDLFLYENSLSGSIPREIGKLSKLEQLFLWQNSLVGGIPEEIGNCSNLKMIDLSLNLL 332

Query: 462 E-SLPNEIGFLKELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLE 518
             S+P  IG L  L+  ++  N++  S+P  I + ++L  L + +N +   IP E+GTL 
Sbjct: 333 SGSIPTSIGRLSFLEEFMISDNKISGSIPTTISNCSSLVQLQLDKNQISGLIPSELGTLT 392

Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS-QIPSEIVV 563
            L   +   N    +IP  LA C++LQ + L    L+  IPS + +
Sbjct: 393 KLTLFFAWSNQLEGSIPPGLAECTDLQALDLSRNSLTGTIPSGLFM 438



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 112/215 (52%), Gaps = 10/215 (4%)

Query: 91  IEKEFLRCKEENILNLDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTN 148
           I +E   C   +++ L L  + IT  +P  +  L  L  L    N+L   +P +IG  + 
Sbjct: 456 IPQEIGNCS--SLVRLRLGFNRITGEIPSGIGSLKKLNFLDFSSNRLHGKVPDEIGSCSE 513

Query: 149 LTCLGLAENSL-TSLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIK 206
           L  + L+ NSL  SLP+ +++L  L+VLD+  N+   ++P  + +L SL  L L  N   
Sbjct: 514 LQMIDLSNNSLEGSLPNPVSSLSGLQVLDVSANQFSGKIPASLGRLVSLNKLILSKNLFS 573

Query: 207 TVHP-DIQYLSNLSMLSMRDNKIR-ELPPELGELKNL-VTLDLAHNHLE-ELPKEIGNCT 262
              P  +   S L +L +  N++  E+P ELG+++NL + L+L+ N L  ++P +I +  
Sbjct: 574 GSIPTSLGMCSGLQLLDLGSNELSGEIPSELGDIENLEIALNLSSNRLTGKIPSKIASLN 633

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
            L  LDL HN L      L N+ NL  L +SYN  
Sbjct: 634 KLSILDLSHNMLEGDLAPLANIENLVSLNISYNSF 668



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 133/293 (45%), Gaps = 51/293 (17%)

Query: 275 VNIPDMLGNLINLTRLRLS-YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           +++P  L  L +L +L +S  N   ++PE+L  C+ L   ++    L       LS L +
Sbjct: 93  LSLPKNLPALRSLQKLTISGANLTGTLPESLGDCLGLTVLDLSSNGLVGDIPWSLSKLRN 152

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           +  + L+ N+ T                        KIP  I S+   L  + + DNLLT
Sbjct: 153 LETLILNSNQLTG-----------------------KIPPDI-SKCLKLKSLILFDNLLT 188

Query: 394 S-LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
             +PL+LG   GL  + +G N+                      +  ++P  IG+   L 
Sbjct: 189 GPIPLELGKLSGLEVIRIGGNK---------------------EISGQIPPEIGDCSNLT 227

Query: 453 CLDLEENKLES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQ-S 509
            L L E  +   LP+ +G LK+LQ L + +  +   +P  +G+ + L  L + EN+L  S
Sbjct: 228 VLGLAETSVSGNLPSSLGKLKKLQTLSIYTTMISGEIPSDLGNCSELVDLFLYENSLSGS 287

Query: 510 IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLD-NCPLSQIPSEI 561
           IP EIG L  L  L+L  N+ +  IP E+  CSNL+++ L  N     IP+ I
Sbjct: 288 IPREIGKLSKLEQLFLWQNSLVGGIPEEIGNCSNLKMIDLSLNLLSGSIPTSI 340



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 124/254 (48%), Gaps = 34/254 (13%)

Query: 106 LDLSKSSITH-LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTS-L 162
           LDLS++S+T  +P  +  L +L +L L  N L+  +P +IG  ++L  L L  N +T  +
Sbjct: 421 LDLSRNSLTGTIPSGLFMLRNLTKLLLISNSLSGFIPQEIGNCSSLVRLRLGFNRITGEI 480

Query: 163 PDSLANLQQLRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSM 220
           P  + +L++L  LD   N+L+ ++P  +   + L+++ L  N ++   P+ +  LS L +
Sbjct: 481 PSGIGSLKKLNFLDFSSNRLHGKVPDEIGSCSELQMIDLSNNSLEGSLPNPVSSLSGLQV 540

Query: 221 LSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-I 277
           L +  N+   ++P  LG L +L  L L+ N     +P  +G C+ L  LDL  NEL   I
Sbjct: 541 LDVSANQFSGKIPASLGRLVSLNKLILSKNLFSGSIPTSLGMCSGLQLLDLGSNELSGEI 600

Query: 278 PDMLGNLINL-------------------------TRLRLSYNRLESVPETLSKCVHLNE 312
           P  LG++ NL                         + L LS+N LE     L+   +L  
Sbjct: 601 PSELGDIENLEIALNLSSNRLTGKIPSKIASLNKLSILDLSHNMLEGDLAPLANIENLVS 660

Query: 313 FNVEGCALSS-LPD 325
            N+   + S  LPD
Sbjct: 661 LNISYNSFSGYLPD 674



 Score = 43.5 bits (101), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 3/115 (2%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNL-TCLGLAENSLTS-LPDSLANLQQL 172
           +P S+   + L+ L L  N+L+  +PS++G + NL   L L+ N LT  +P  +A+L +L
Sbjct: 576 IPTSLGMCSGLQLLDLGSNELSGEIPSELGDIENLEIALNLSSNRLTGKIPSKIASLNKL 635

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
            +LDL HN L      +  + +L  L + +N      PD +    L +  +  NK
Sbjct: 636 SILDLSHNMLEGDLAPLANIENLVSLNISYNSFSGYLPDNKLFRQLPLQDLEGNK 690


>gi|195024930|ref|XP_001985965.1| GH21104 [Drosophila grimshawi]
 gi|193901965|gb|EDW00832.1| GH21104 [Drosophila grimshawi]
          Length = 910

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 192/378 (50%), Gaps = 26/378 (6%)

Query: 183 NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
           +  P V     +L+ L+L   R++T+ P + Y   L +L +  N +  +P  +G L+ L 
Sbjct: 31  DAFPEVWQHERTLEELHLSNARLQTLPPQLFYCQGLRVLQVNSNNLESIPQAIGSLRQLQ 90

Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE 302
            LDL  N +  +P+EI  C  L  LDL  N L  +PD + +LI+L  L L+   LE +P 
Sbjct: 91  HLDLNRNLIVNVPEEIKACKHLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPA 150

Query: 303 TLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
              + V+L    V    L +LP  ++  L S+  + +  N+FT  P     +  S+  + 
Sbjct: 151 NFGRLVNLRILEVRLNNLITLPKSMVR-LVSLQRLDIGGNEFTELPEVI-GELKSLRELW 208

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI------- 415
            + NQI ++   I  + + L       NLL +LP +L  W  +  L++ +N +       
Sbjct: 209 IDFNQIRRVAPNI-GKLRELQHFEANGNLLDALPNELSNWRNVEVLSVCSNNLEAFPFSF 267

Query: 416 ----------------SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
                           S+L + I  L  LE LVLS+N L +LPS+IG+L KL+ L  ++N
Sbjct: 268 GMLKSLVTFKCESNGLSELPDSISYLEQLEELVLSHNKLMRLPSTIGSLVKLRFLFADDN 327

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L  LP+E+    +L  L + +NQL +LP+ IGHL  L  L+V  N + ++P  + +L N
Sbjct: 328 QLRQLPDELCSCSQLSVLSVANNQLSALPQNIGHLGKLKVLNVVNNYINALPVSMLSLVN 387

Query: 520 LHTLYLNDNTCLNNIPFE 537
           L +L+L+DN     +P +
Sbjct: 388 LTSLWLSDNQSQPLVPLQ 405



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 196/387 (50%), Gaps = 6/387 (1%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           +EE I  LD S + +    P V +    LEEL+L   +L +LP Q+ Y   L  L +  N
Sbjct: 15  REEVIDKLDYSNTPLQDAFPEVWQHERTLEELHLSNARLQTLPPQLFYCQGLRVLQVNSN 74

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           +L S+P ++ +L+QL+ LDL  N +  +P  +     L  L L  N ++ +   I  L +
Sbjct: 75  NLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKACKHLTHLDLSCNSLQRLPDAITSLIS 134

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L + +  +  LP   G L NL  L++  N+L  LPK +     L  LD+  NE   +
Sbjct: 135 LQELLLNETYLEFLPANFGRLVNLRILEVRLNNLITLPKSMVRLVSLQRLDIGGNEFTEL 194

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P+++G L +L  L + +N++  V   + K   L  F   G  L +LP+  LS+  ++  +
Sbjct: 195 PEVIGELKSLRELWIDFNQIRRVAPNIGKLRELQHFEANGNLLDALPNE-LSNWRNVEVL 253

Query: 338 TLSRNKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           ++  N   A+P S G     S+ +   E N + ++P  I S  + L ++ +  N L  LP
Sbjct: 254 SVCSNNLEAFPFSFG--MLKSLVTFKCESNGLSELPDSI-SYLEQLEELVLSHNKLMRLP 310

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +G+ V L  L    NQ+ +L +++ +   L VL ++NN L  LP +IG+L KLK L++
Sbjct: 311 STIGSLVKLRFLFADDNQLRQLPDELCSCSQLSVLSVANNQLSALPQNIGHLGKLKVLNV 370

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQ 483
             N + +LP  +  L  L  L L  NQ
Sbjct: 371 VNNYINALPVSMLSLVNLTSLWLSDNQ 397



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 158/326 (48%), Gaps = 28/326 (8%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           +N+ +E   CK  ++ +LDLS +S+  LP ++  L  L+EL L    L  LP+  G + N
Sbjct: 100 VNVPEEIKACK--HLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPANFGRLVN 157

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L +  N+L +LP S+  L  L+ LD+  N+  ELP V+ +L SL+ L++ FN+I+ V
Sbjct: 158 LRILEVRLNNLITLPKSMVRLVSLQRLDIGGNEFTELPEVIGELKSLRELWIDFNQIRRV 217

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
            P+I  L  L       N +  LP EL   +N+  L +  N+LE  P   G    LVT  
Sbjct: 218 APNIGKLRELQHFEANGNLLDALPNELSNWRNVEVLSVCSNNLEAFPFSFGMLKSLVTFK 277

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
            + N L  +PD +  L  L  L LS+N+L  +P T+   V L     +   L  LPD L 
Sbjct: 278 CESNGLSELPDSISYLEQLEELVLSHNKLMRLPSTIGSLVKLRFLFADDNQLRQLPDELC 337

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           S                          + +  ++  +NQ+  +P  I    K L  +N+ 
Sbjct: 338 SC-------------------------SQLSVLSVANNQLSALPQNIGHLGK-LKVLNVV 371

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQ 414
           +N + +LP+ + + V LT L L  NQ
Sbjct: 372 NNYINALPVSMLSLVNLTSLWLSDNQ 397



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 71/133 (53%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           ++++      + ++ LP S+  L  LEEL L  NKL  LPS IG +  L  L   +N L 
Sbjct: 271 KSLVTFKCESNGLSELPDSISYLEQLEELVLSHNKLMRLPSTIGSLVKLRFLFADDNQLR 330

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LPD L +  QL VL + +N+L+ LP  +  L  LK+L +  N I  +   +  L NL+ 
Sbjct: 331 QLPDELCSCSQLSVLSVANNQLSALPQNIGHLGKLKVLNVVNNYINALPVSMLSLVNLTS 390

Query: 221 LSMRDNKIRELPP 233
           L + DN+ + L P
Sbjct: 391 LWLSDNQSQPLVP 403


>gi|440894992|gb|ELR47302.1| Leucine-rich repeat and IQ domain-containing protein 4, partial
           [Bos grunniens mutus]
          Length = 585

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 224/488 (45%), Gaps = 68/488 (13%)

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
           SL ++P+ +  L++L  + L +N + E+P  +  L  +++LYL  N++K + P++  LSN
Sbjct: 62  SLLTIPEDILALRELEEVHLENNLIAEIPKDIQHLRKIRVLYLNKNKLKNLCPEMGRLSN 121

Query: 218 LSMLSMRDNKIRELP-PELGELKNLVTLDL------------------------AHNHLE 252
           L  L + DN +     P L  ++ L  L L                        A NHL+
Sbjct: 122 LEGLDLSDNPLEASSLPVLSGIRQLRELRLYRTDLADIPVVICKLLHHLELLGLAGNHLK 181

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
            LPKEI N T L  + L+HN+    P  L +L NL  + L  N+L  +PE +     L +
Sbjct: 182 SLPKEIVNQTKLREIHLKHNQFAAFPLELCDLYNLEIIDLDKNKLTVIPEEIGNLTKLKK 241

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDK 370
           F V   +L+ LP+  L   T ++ + +S N+  A P   G  +Q T V       N ++K
Sbjct: 242 FYVSYNSLAVLPES-LGRCTRLSVLDVSYNRLHALPHTLGELSQMTEV---GLSGNHLEK 297

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           IP  +  R  +L  + + +  L  L       V L  L+L  N +      I +L NLEV
Sbjct: 298 IPR-LLCRWTSLFLLYLHNTGLRVLRRSFRRLVNLQFLDLSQNFLEHCPLQICSLKNLEV 356

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLIL---QSNQLVSL 487
           L L +N + +LPS  G+L KLK L L  N+  S P EI  L  L++L +   +  +L  L
Sbjct: 357 LALDDNKICQLPSDFGSLSKLKILGLTGNQFSSFPKEILSLASLEKLYIGQDEGAKLTHL 416

Query: 488 PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL--------YLNDNTC----LNNIP 535
           P  I  L NL  L +  N+L+ +P  +G++ NL  L         L D  C    L  + 
Sbjct: 417 PECIKRLQNLKELYIENNHLEYLPVSLGSMPNLEILDCHCNLIKQLPDAICQAQALKELR 476

Query: 536 FELALCS----------NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYL-----------K 574
           FE  L +          NL++++L   P+ + P  +   G   +  YL           K
Sbjct: 477 FEDNLITYLPENLDSLVNLEVLTLTGNPMEEPPMSVCAKGTEAVWEYLRERRNMKELATK 536

Query: 575 MQGPYRTM 582
           +Q  +R M
Sbjct: 537 IQAWWRGM 544



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 219/455 (48%), Gaps = 35/455 (7%)

Query: 86  QADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGY 145
           Q+ L I ++ L  +E  +  + L  + I  +P  ++ L  +  LYL  NKL +L  ++G 
Sbjct: 61  QSLLTIPEDILALRE--LEEVHLENNLIAEIPKDIQHLRKIRVLYLNKNKLKNLCPEMGR 118

Query: 146 VTNLTCLGLAENSL--TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF- 202
           ++NL  L L++N L  +SLP  L+ ++QLR L L    L ++P+V+ KL     L     
Sbjct: 119 LSNLEGLDLSDNPLEASSLP-VLSGIRQLRELRLYRTDLADIPVVICKLLHHLELLGLAG 177

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N +K++  +I   + L  + ++ N+    P EL +L NL  +DL  N L  +P+EIGN T
Sbjct: 178 NHLKSLPKEIVNQTKLREIHLKHNQFAAFPLELCDLYNLEIIDLDKNKLTVIPEEIGNLT 237

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L    + +N L  +P+ LG    L+ L +SYNRL ++P TL +   + E  + G  L  
Sbjct: 238 KLKKFYVSYNSLAVLPESLGRCTRLSVLDVSYNRLHALPHTLGELSQMTEVGLSGNHLEK 297

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           +P  LL   TS+  + L              +  ++  ++   N ++  P  I S  KNL
Sbjct: 298 IPR-LLCRWTSLFLLYLHNTGLRVLRRSF-RRLVNLQFLDLSQNFLEHCPLQICS-LKNL 354

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK------------------------- 417
             + + DN +  LP D G+   L  L L  NQ S                          
Sbjct: 355 EVLALDDNKICQLPSDFGSLSKLKILGLTGNQFSSFPKEILSLASLEKLYIGQDEGAKLT 414

Query: 418 -LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
            L E I+ L NL+ L + NN L+ LP S+G++  L+ LD   N ++ LP+ I   + L+ 
Sbjct: 415 HLPECIKRLQNLKELYIENNHLEYLPVSLGSMPNLEILDCHCNLIKQLPDAICQAQALKE 474

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
           L  + N +  LP  +  L NL  L++  N ++  P
Sbjct: 475 LRFEDNLITYLPENLDSLVNLEVLTLTGNPMEEPP 509



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 194/395 (49%), Gaps = 13/395 (3%)

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           ++  +D  +  L  +P  +  L  L+ ++L  N I  +  DIQ+L  + +L +  NK++ 
Sbjct: 52  RIFFIDASNQSLLTIPEDILALRELEEVHLENNLIAEIPKDIQHLRKIRVLYLNKNKLKN 111

Query: 231 LPPELGELKNLVTLDLAHNHLEE--LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           L PE+G L NL  LDL+ N LE   LP  +     L  L L   +L +IP ++  L++  
Sbjct: 112 LCPEMGRLSNLEGLDLSDNPLEASSLPV-LSGIRQLRELRLYRTDLADIPVVICKLLHHL 170

Query: 289 RLRL-SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            L   + N L+S+P+ +     L E +++    ++ P  L   L ++  I L +NK T  
Sbjct: 171 ELLGLAGNHLKSLPKEIVNQTKLREIHLKHNQFAAFPLEL-CDLYNLEIIDLDKNKLTVI 229

Query: 348 PS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           P   G  T+    Y     +N +  +P  +  R   LS +++  N L +LP  LG    +
Sbjct: 230 PEEIGNLTKLKKFY---VSYNSLAVLPESL-GRCTRLSVLDVSYNRLHALPHTLGELSQM 285

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
           TE+ L  N + K+   +    +L +L L N  L+ L  S   L  L+ LDL +N LE  P
Sbjct: 286 TEVGLSGNHLEKIPRLLCRWTSLFLLYLHNTGLRVLRRSFRRLVNLQFLDLSQNFLEHCP 345

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            +I  LK L+ L L  N++  LP   G L+ L  L +  N   S P+EI +L +L  LY+
Sbjct: 346 LQICSLKNLEVLALDDNKICQLPSDFGSLSKLKILGLTGNQFSSFPKEILSLASLEKLYI 405

Query: 526 --NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             ++   L ++P  +    NL+ + ++N  L  +P
Sbjct: 406 GQDEGAKLTHLPECIKRLQNLKELYIENNHLEYLP 440



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 180/389 (46%), Gaps = 11/389 (2%)

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           DLR N      + V  ++S    Y   +RI+      Q    +  +   +  +  +P ++
Sbjct: 16  DLREN-----AVFVLIMSSDSEKYEHSSRIQQKSDPQQVSDRIFFIDASNQSLLTIPEDI 70

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
             L+ L  + L +N + E+PK+I +   +  L L  N+L N+   +G L NL  L LS N
Sbjct: 71  LALRELEEVHLENNLIAEIPKDIQHLRKIRVLYLNKNKLKNLCPEMGRLSNLEGLDLSDN 130

Query: 296 RLE--SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
            LE  S+P  LS    L E  +    L+ +P  +   L  +  + L+ N   + P     
Sbjct: 131 PLEASSLP-VLSGIRQLRELRLYRTDLADIPVVICKLLHHLELLGLAGNHLKSLPKEIVN 189

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
           Q T +  I+ +HNQ    P  +     NL  +++  N LT +P ++G    L +  +  N
Sbjct: 190 Q-TKLREIHLKHNQFAAFPLELCD-LYNLEIIDLDKNKLTVIPEEIGNLTKLKKFYVSYN 247

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
            ++ L E +     L VL +S N L  LP ++G L ++  + L  N LE +P  +     
Sbjct: 248 SLAVLPESLGRCTRLSVLDVSYNRLHALPHTLGELSQMTEVGLSGNHLEKIPRLLCRWTS 307

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L  L L +  L  L R+   L NL +L + +N L+  P +I +L+NL  L L+DN  +  
Sbjct: 308 LFLLYLHNTGLRVLRRSFRRLVNLQFLDLSQNFLEHCPLQICSLKNLEVLALDDNK-ICQ 366

Query: 534 IPFELALCSNLQIMSLDNCPLSQIPSEIV 562
           +P +    S L+I+ L     S  P EI+
Sbjct: 367 LPSDFGSLSKLKILGLTGNQFSSFPKEIL 395


>gi|225690587|ref|NP_001139520.1| leucine-rich repeat-containing protein 1 isoform 1 [Mus musculus]
 gi|50400985|sp|Q80VQ1.2|LRRC1_MOUSE RecName: Full=Leucine-rich repeat-containing protein 1
 gi|56270287|gb|AAH87542.1| Lrrc1 protein [Mus musculus]
 gi|74151056|dbj|BAE27656.1| unnamed protein product [Mus musculus]
 gi|148694402|gb|EDL26349.1| leucine rich repeat containing 1, isoform CRA_a [Mus musculus]
          Length = 524

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 195/390 (50%), Gaps = 28/390 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + +  +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I
Sbjct: 12  RHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LPPE+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLT 131

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L ++   L+S+PE +    +L    +    L+ LPD L                     
Sbjct: 132 CLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL--------------------- 170

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
               TQ   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L
Sbjct: 171 ----TQLRRLEELDLGNNEIYNLPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKNLLCL 225

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L L++N+L  LP  I
Sbjct: 226 DVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAI 285

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + L  L+L  N+L++LP++IG L  LS L+   N L S+P+EIG   +L    + DN
Sbjct: 286 GDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTMFCIRDN 345

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L  +P E++    L ++ +    L  +P
Sbjct: 346 R-LTRLPAEVSQAVELHVLDVAGNRLHHLP 374



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 193/405 (47%), Gaps = 28/405 (6%)

Query: 125 HLEELYLYGNKLASLPSQI-GYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLN 183
           H+E +      L  +P +I  Y  +L  L L  N L  LP+    L +LR L L  N++ 
Sbjct: 13  HVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 184 ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVT 243
            LP  +     L  L +  N I  +   I +   L +     N +  LP    EL+NL  
Sbjct: 73  RLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTC 132

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L +    L+ LP+ IGN   L +L+L+ N L  +PD L  L  L  L L  N + ++PE+
Sbjct: 133 LSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES 192

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           +   +HL +  ++G  LS LP         I N+                   ++  ++ 
Sbjct: 193 IGALLHLKDLWLDGNQLSELPQ-------EIGNLK------------------NLLCLDV 227

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
             N+++++P  I S   +L+ + +  NLL ++P  +G    L+ L L  N++++L E I 
Sbjct: 228 SENRLERLPEEI-SGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIG 286

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           +  NL  LVL+ N L  LP SIG L+KL  L+ + NKL SLP EIG    L    ++ N+
Sbjct: 287 DCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTMFCIRDNR 346

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L  LP  +     L  L V  N L  +P  + TL+ L  L+L+DN
Sbjct: 347 LTRLPAEVSQAVELHVLDVAGNRLHHLPLSLTTLK-LKALWLSDN 390



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 193/395 (48%), Gaps = 31/395 (7%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++  +D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 7   LWRCNR-HVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFN---RIKTVHP 210
           L++N +  LP  +AN  QL  LD+  N + E+P  +    +L++     N   R+    P
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFP 125

Query: 211 DIQYLS--------------------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
           ++Q L+                    NL+ L +R+N +  LP  L +L+ L  LDL +N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           +  LP+ IG    L  L L  N+L  +P  +GNL NL  L +S NRLE +PE +S    L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQID 369
               +    L ++P+G +  L  ++ + L +N+ T  P   G  +  ++  +    N++ 
Sbjct: 246 TYLVISQNLLETIPEG-IGKLKKLSILKLDQNRLTQLPEAIGDCE--NLTELVLTENRLL 302

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
            +P  I  + K LS +N   N L SLP ++G    LT   +  N++++L  ++   V L 
Sbjct: 303 TLPKSI-GKLKKLSNLNADRNKLVSLPKEIGGCCSLTMFCIRDNRLTRLPAEVSQAVELH 361

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           VL ++ N L  LP S+  L KLK L L +N+ + L
Sbjct: 362 VLDVAGNRLHHLPLSLTTL-KLKALWLSDNQSQPL 395



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 119/346 (34%), Positives = 178/346 (51%), Gaps = 13/346 (3%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 84  LVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IP+ +G
Sbjct: 204 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L+L  NRL  +PE +  C +L E  +    L +LP   +  L  ++N+   RN
Sbjct: 264 KLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKS-IGKLKKLSNLNADRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T ++ I    N++ ++P  + S+A  L  +++  N L  LPL L 
Sbjct: 323 KLVSLPKEIGGCCSLT-MFCI--RDNRLTRLPAEV-SQAVELHVLDVAGNRLHHLPLSLT 378

Query: 401 TWVGLTELNLGTNQISKL---SEDIQNLVNLEVLVLSNNLLKKLPS 443
           T + L  L L  NQ   L     DI      ++L     LL ++PS
Sbjct: 379 T-LKLKALWLSDNQSQPLLTFQTDIDRATGEKILTCV--LLPQMPS 421



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 178/376 (47%), Gaps = 81/376 (21%)

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
           +Y  +L  L +  N++RELP +  +L  L  L L+ N ++ LP EI N   LV LD+  N
Sbjct: 33  RYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRN 92

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL--LSS 330
           +   IP+                    +PE+++ C  L   +  G  L+ LP+    L +
Sbjct: 93  D---IPE--------------------IPESIAFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 331 LT--SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           LT  S+N+I+L            P    ++Y                     NL+ + ++
Sbjct: 130 LTCLSVNDISLQ---------SLPENIGNLY---------------------NLASLELR 159

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
           +NLLT LP  L     L EL+LG N+I  L E I  L++L+ L L  N L +LP  IGNL
Sbjct: 160 ENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNL 219

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLIL-----------------------QSNQLV 485
           + L CLD+ EN+LE LP EI  L  L  L++                         N+L 
Sbjct: 220 KNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLT 279

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
            LP AIG   NL+ L + EN L ++P+ IG L+ L  L  + N  L ++P E+  C +L 
Sbjct: 280 QLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNK-LVSLPKEIGGCCSLT 338

Query: 546 IMSLDNCPLSQIPSEI 561
           +  + +  L+++P+E+
Sbjct: 339 MFCIRDNRLTRLPAEV 354


>gi|189241927|ref|XP_968016.2| PREDICTED: similar to mitotic protein phosphatase 1 regulator,
           putative [Tribolium castaneum]
          Length = 594

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 154/523 (29%), Positives = 235/523 (44%), Gaps = 77/523 (14%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           L  L L  N L  +P +IG   +LT L L +N++TSLP  + NL +L  L+L HNK+N L
Sbjct: 78  LNYLDLSSNVLQEIPGKIGMFEDLTALNLQDNNITSLPPEICNLTKLTKLNLSHNKINLL 137

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           PM  YKL  L++L L  N ++ +  +   L  L  L +  N + +LPP +G L  L  ++
Sbjct: 138 PMEFYKLVELQVLSLAHNNLEKISKNFADLVMLQQLDLSHNILTKLPPGMGFLVRLTEIN 197

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELV----------------------NIPDMLG- 282
           L+HN L ELP +I N   L+ LD+ HN+LV                       IPD  G 
Sbjct: 198 LSHNKLIELPPDIVNLRGLLKLDVTHNDLVYLPKMGELAKLQFLYAQHNNIEEIPDFEGC 257

Query: 283 ----------------------NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
                                 N+ NL  L L  N++E +P  ++   HL   ++    L
Sbjct: 258 THLQQVYFGNNYIKVITTDFCENMSNLKILDLRDNKIEQIPNEIAMLQHLIRLDLTNNDL 317

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPS----GGPTQFTSVYSINFEHNQIDKIP---- 372
           + LP+ L   L  + N+ L  NK          GG  +         +   ++ +P    
Sbjct: 318 TDLPNSL-GLLAHLQNLQLEGNKLKKIRGDIIKGGTMRILKHLKEQLDDEDLESVPKVST 376

Query: 373 -----------YGI-FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL---NLGTNQISK 417
                      Y I  SR+ N   V MK   LTS+P D+     L E+   +L  N++  
Sbjct: 377 MQHEAKTFPDKYTIKHSRSLN---VTMKQ--LTSVPDDVFEEAKLAEVTIVDLCKNKLPS 431

Query: 418 LSEDIQNLV-NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
           +   IQ +  NL  L LS N + ++P  I N  KLK  DL  N L  LP  +  L  L+ 
Sbjct: 432 VPNGIQLVAENLTELNLSMNAISEIPEFISNCIKLKYFDLGNNLLSDLPECLSSLVGLRE 491

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI-PEEIGTLENLHTLYLNDNTCLNNIP 535
           L+L +N+ V +P  +  +  L  L   +N +  I  E +  L  + TL L +N  +++IP
Sbjct: 492 LVLSNNRFVHIPDCVYSMVGLEILLASDNKITDINVEGLKNLTRIATLDLTNNN-MSHIP 550

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGP 578
            EL   + L+ + L      Q    I+  G + ++ YL+ + P
Sbjct: 551 PELGNVTQLRTLELRGNCFRQPRYAILEQGTASVLSYLRDRIP 593



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 206/434 (47%), Gaps = 50/434 (11%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS + +T LPP +  L  L E+ L  NKL  LP  I  +  L  L +  N L  LP  
Sbjct: 173 LDLSHNILTKLPPGMGFLVRLTEINLSHNKLIELPPDIVNLRGLLKLDVTHNDLVYLP-K 231

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI-QYLSNLSMLSMR 224
           +  L +L+ L  +HN + E+P      T L+ +Y   N IK +  D  + +SNL +L +R
Sbjct: 232 MGELAKLQFLYAQHNNIEEIP-DFEGCTHLQQVYFGNNYIKVITTDFCENMSNLKILDLR 290

Query: 225 DNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNL 284
           DNKI ++P E+  L++L+ LDL +N L +LP  +G    L  L L+ N+L  I    G++
Sbjct: 291 DNKIEQIPNEIAMLQHLIRLDLTNNDLTDLPNSLGLLAHLQNLQLEGNKLKKIR---GDI 347

Query: 285 INLTRLR--------LSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           I    +R        L    LESVP+ +S   H            + PD      +   N
Sbjct: 348 IKGGTMRILKHLKEQLDDEDLESVPK-VSTMQH---------EAKTFPDKYTIKHSRSLN 397

Query: 337 ITLSRNKFTAYPSG--GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
           +T+ +   T+ P       +   V  ++   N++  +P GI   A+NL+++N+  N ++ 
Sbjct: 398 VTMKQ--LTSVPDDVFEEAKLAEVTIVDLCKNKLPSVPNGIQLVAENLTELNLSMNAISE 455

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           +P  +   + L   +LG N +S L E + +LV L  LVLSNN    +P  + ++  L+ L
Sbjct: 456 IPEFISNCIKLKYFDLGNNLLSDLPECLSSLVGLRELVLSNNRFVHIPDCVYSMVGLEIL 515

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
              +NK+  +  E                       + +LT ++ L +  NN+  IP E+
Sbjct: 516 LASDNKITDINVE----------------------GLKNLTRIATLDLTNNNMSHIPPEL 553

Query: 515 GTLENLHTLYLNDN 528
           G +  L TL L  N
Sbjct: 554 GNVTQLRTLELRGN 567


>gi|427720310|ref|YP_007068304.1| adenylate cyclase [Calothrix sp. PCC 7507]
 gi|427352746|gb|AFY35470.1| Adenylate cyclase [Calothrix sp. PCC 7507]
          Length = 317

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/321 (35%), Positives = 156/321 (48%), Gaps = 40/321 (12%)

Query: 221 LSMRDNKIRELPPELGELKNLVTL--------------DLAHNHLEELPKEIGNCTMLVT 266
           L +  N +  LPPE+G+L  L  L              D+  N+L  LPKE+G    L  
Sbjct: 21  LDLSGNNLTALPPEIGKLTQLKKLILGKYQYDQEGYIVDIIGNNLSALPKELGLLNQLEE 80

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           L +  N L  +P  +G L NL    L YN+L S+P  + +  HL   ++    LSSLP  
Sbjct: 81  LLVLANHLTTLPSAIGQLTNLQTFVLKYNQLSSLPREIGQLSHLQLLDIRSNQLSSLPRE 140

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
           +                          Q + +  +    NQ+  +P  I  +  NL  ++
Sbjct: 141 I-------------------------GQLSHLQLLYLRSNQLSSLPREI-EQLTNLRSLD 174

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           + DN L+SLP ++G    L  L L  N++  L  +I  L +LE L L +N L  LP  IG
Sbjct: 175 LGDNQLSSLPREIGQLFNLQSLYLYKNRLIDLPSEIGQLSHLESLNLGDNQLSNLPREIG 234

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            L  L+ L L EN+L SLPNE   L  LQRL L  NQL SLP+ IG LTNL +L +  N 
Sbjct: 235 QLSNLRSLGLGENQLSSLPNEFTQLTNLQRLDLSFNQLSSLPKKIGQLTNLQWLILHNNQ 294

Query: 507 LQSIPEEIGTLENLHTLYLND 527
           L S+P EIG L NL +L L D
Sbjct: 295 LSSLPSEIGQLTNLRSLDLAD 315



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 160/299 (53%), Gaps = 42/299 (14%)

Query: 92  EKEFLRCKE----ENILNLDLSKSSITHLPPSVEKLTHL--------------------- 126
           E+E L+  E    E +  LDLS +++T LPP + KLT L                     
Sbjct: 3   EEELLKVIEQAATEGVTELDLSGNNLTALPPEIGKLTQLKKLILGKYQYDQEGYIVDIIG 62

Query: 127 ----------------EELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQ 170
                           EEL +  N L +LPS IG +TNL    L  N L+SLP  +  L 
Sbjct: 63  NNLSALPKELGLLNQLEELLVLANHLTTLPSAIGQLTNLQTFVLKYNQLSSLPREIGQLS 122

Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
            L++LD+R N+L+ LP  + +L+ L++LYLR N++ ++  +I+ L+NL  L + DN++  
Sbjct: 123 HLQLLDIRSNQLSSLPREIGQLSHLQLLYLRSNQLSSLPREIEQLTNLRSLDLGDNQLSS 182

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP E+G+L NL +L L  N L +LP EIG  + L +L+L  N+L N+P  +G L NL  L
Sbjct: 183 LPREIGQLFNLQSLYLYKNRLIDLPSEIGQLSHLESLNLGDNQLSNLPREIGQLSNLRSL 242

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS 349
            L  N+L S+P   ++  +L   ++    LSSLP   +  LT++  + L  N+ ++ PS
Sbjct: 243 GLGENQLSSLPNEFTQLTNLQRLDLSFNQLSSLPKK-IGQLTNLQWLILHNNQLSSLPS 300



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/326 (34%), Positives = 167/326 (51%), Gaps = 42/326 (12%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDL---QHNELVNIPDMLGNLINLTRLRLSYN 295
           + +  LDL+ N+L  LP EIG  T L  L L   Q+++   I D++GN            
Sbjct: 16  EGVTELDLSGNNLTALPPEIGKLTQLKKLILGKYQYDQEGYIVDIIGN------------ 63

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
            L ++P+ L     L E  V    L++LP  +                          Q 
Sbjct: 64  NLSALPKELGLLNQLEELLVLANHLTTLPSAI-------------------------GQL 98

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
           T++ +   ++NQ+  +P  I  +  +L  ++++ N L+SLP ++G    L  L L +NQ+
Sbjct: 99  TNLQTFVLKYNQLSSLPREI-GQLSHLQLLDIRSNQLSSLPREIGQLSHLQLLYLRSNQL 157

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           S L  +I+ L NL  L L +N L  LP  IG L  L+ L L +N+L  LP+EIG L  L+
Sbjct: 158 SSLPREIEQLTNLRSLDLGDNQLSSLPREIGQLFNLQSLYLYKNRLIDLPSEIGQLSHLE 217

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
            L L  NQL +LPR IG L+NL  L +GEN L S+P E   L NL  L L+ N  L+++P
Sbjct: 218 SLNLGDNQLSNLPREIGQLSNLRSLGLGENQLSSLPNEFTQLTNLQRLDLSFNQ-LSSLP 276

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEI 561
            ++   +NLQ + L N  LS +PSEI
Sbjct: 277 KKIGQLTNLQWLILHNNQLSSLPSEI 302



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/214 (37%), Positives = 125/214 (58%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+    L  + ++ LP  + +L+HL+ L +  N+L+SLP +IG +++L  L L  N L+S
Sbjct: 100 NLQTFVLKYNQLSSLPREIGQLSHLQLLDIRSNQLSSLPREIGQLSHLQLLYLRSNQLSS 159

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L  LR LDL  N+L+ LP  + +L +L+ LYL  NR+  +  +I  LS+L  L
Sbjct: 160 LPREIEQLTNLRSLDLGDNQLSSLPREIGQLFNLQSLYLYKNRLIDLPSEIGQLSHLESL 219

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++ DN++  LP E+G+L NL +L L  N L  LP E    T L  LDL  N+L ++P  +
Sbjct: 220 NLGDNQLSNLPREIGQLSNLRSLGLGENQLSSLPNEFTQLTNLQRLDLSFNQLSSLPKKI 279

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
           G L NL  L L  N+L S+P  + +  +L   ++
Sbjct: 280 GQLTNLQWLILHNNQLSSLPSEIGQLTNLRSLDL 313



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 114/188 (60%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD+  + ++ LP  + +L+HL+ LYL  N+L+SLP +I  +TNL  L L +N L+SLP  
Sbjct: 127 LDIRSNQLSSLPREIGQLSHLQLLYLRSNQLSSLPREIEQLTNLRSLDLGDNQLSSLPRE 186

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L+ L L  N+L +LP  + +L+ L+ L L  N++  +  +I  LSNL  L + +
Sbjct: 187 IGQLFNLQSLYLYKNRLIDLPSEIGQLSHLESLNLGDNQLSNLPREIGQLSNLRSLGLGE 246

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP E  +L NL  LDL+ N L  LPK+IG  T L  L L +N+L ++P  +G L 
Sbjct: 247 NQLSSLPNEFTQLTNLQRLDLSFNQLSSLPKKIGQLTNLQWLILHNNQLSSLPSEIGQLT 306

Query: 286 NLTRLRLS 293
           NL  L L+
Sbjct: 307 NLRSLDLA 314



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/146 (40%), Positives = 94/146 (64%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +LDL  + ++ LP  + +L +L+ LYLY N+L  LPS+IG +++L  L L +N L++
Sbjct: 169 NLRSLDLGDNQLSSLPREIGQLFNLQSLYLYKNRLIDLPSEIGQLSHLESLNLGDNQLSN 228

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L  LR L L  N+L+ LP    +LT+L+ L L FN++ ++   I  L+NL  L
Sbjct: 229 LPREIGQLSNLRSLGLGENQLSSLPNEFTQLTNLQRLDLSFNQLSSLPKKIGQLTNLQWL 288

Query: 222 SMRDNKIRELPPELGELKNLVTLDLA 247
            + +N++  LP E+G+L NL +LDLA
Sbjct: 289 ILHNNQLSSLPSEIGQLTNLRSLDLA 314


>gi|46445672|ref|YP_007037.1| hypothetical protein pc0038 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46399313|emb|CAF22762.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 953

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 152/542 (28%), Positives = 229/542 (42%), Gaps = 126/542 (23%)

Query: 55  KKCGVDVKKTVTVKH----PESNKPKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSK 110
           KK   D KK+V  K+    P S+   P+T    P+ +                 +L  + 
Sbjct: 64  KKIVWDQKKSVISKNVIIRPRSDVSLPSTNLIPPLSSS----------------SLMKTN 107

Query: 111 SSITHLPPSVEKLTHLEELY------LYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           + +T L   + +   + E+Y      L    L  LPS  G +  L  L L  N L +LP+
Sbjct: 108 AYLTTLDSELAQFCKIFEIYNTRIISLAEKNLHILPSSFGNLNQLNHLDLTNNQLQTLPN 167

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTS---------------LKILYLRFNRIKTVH 209
           S  NL  LR L+L +N+ +E+P  +++L S               L  L  R N+     
Sbjct: 168 SFENLTNLRSLNLCNNQFSEIPDCLFRLPSACDINLKENPLSQEILDQLNQRVNQTNYQG 227

Query: 210 PDIQYLS------------------------------------NLSMLSMRDNKIRELPP 233
           P  Q  S                                    + SM+S+ +  I+ LP 
Sbjct: 228 PKFQVSSPTPSFCSELMDQIIPRSEPILLDDALAQFCRFFEIHDTSMISLTEKNIQLLPS 287

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL------------------- 274
             G L NL  L+L +N L+ LP   GN T L  L L +N+L                   
Sbjct: 288 SFGNLINLFFLNLINNQLQTLPDSFGNLTNLQFLYLYNNKLELLPTSFGNLNQLNKLNLA 347

Query: 275 ----VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
                 +P   GNL NLT+L L+ N+LE +P +  K   L +  +    L SLP+ L ++
Sbjct: 348 NNQLQILPQFFGNLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQIAYNQLQSLPE-LFTN 406

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           L ++  + L+ N     P                        +G  +R   L  +N+ +N
Sbjct: 407 LINLQTLDLNNNNLRTLPDS----------------------FGNLNR---LHVLNLSNN 441

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L  LP   G    L +L++  NQ+  L   + NLVNL+ L L+NN L+ LP+S GNL +
Sbjct: 442 QLQVLPHSFGNLTQLRDLHIAYNQLQSLPGSLTNLVNLQTLDLNNNNLQTLPNSFGNLNQ 501

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           +  L+L  N+  SLP   G L +LQ L L +NQ+  LP    +L NL+ L +  N LQ++
Sbjct: 502 INYLNLANNQFHSLPESFGNLTKLQCLYLYNNQIQILPETFSNLINLTELHLNYNQLQTL 561

Query: 511 PE 512
           PE
Sbjct: 562 PE 563



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 164/307 (53%), Gaps = 13/307 (4%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L L+ + +  LP S  KLT L++L +  N+L SLP     + NL  L L  N+L +
Sbjct: 363 NLTKLYLNNNKLELLPTSFGKLTQLKKLQIAYNQLQSLPELFTNLINLQTLDLNNNNLRT 422

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LPDS  NL +L VL+L +N+L  LP     LT L+ L++ +N+++++   +  L NL  L
Sbjct: 423 LPDSFGNLNRLHVLNLSNNQLQVLPHSFGNLTQLRDLHIAYNQLQSLPGSLTNLVNLQTL 482

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + +N ++ LP   G L  +  L+LA+N    LP+  GN T L  L L +N++  +P+  
Sbjct: 483 DLNNNNLQTLPNSFGNLNQINYLNLANNQFHSLPESFGNLTKLQCLYLYNNQIQILPETF 542

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
            NLINLT L L+YN+L+++PET +   +L   N+ G    ++P+ L   L+S   I L  
Sbjct: 543 SNLINLTELHLNYNQLQTLPETFTNLTNLRNLNLTGNNFETIPECLF-HLSSECEIYLEA 601

Query: 342 N------------KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
           N            + +     GP    S+Y+ +F +NQ ++I     S  K     N + 
Sbjct: 602 NPLSREILDQLNRRTSQSNYQGPRFHVSIYTPSFHNNQTNQIFLNFESILKEWCNKNCQT 661

Query: 390 NLLTSLP 396
            LL++LP
Sbjct: 662 KLLSNLP 668



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 135/439 (30%), Positives = 200/439 (45%), Gaps = 56/439 (12%)

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
           +I  + N   + LAE +L  LP S  NL QL  LDL +N+L  LP     LT+L+ L L 
Sbjct: 122 KIFEIYNTRIISLAEKNLHILPSSFGNLNQLNHLDLTNNQLQTLPNSFENLTNLRSLNLC 181

Query: 202 FNRIKTVHPDIQY--------------LSN--LSMLSMRDNKIRELPPELG--------- 236
            N+   + PD  +              LS   L  L+ R N+     P+           
Sbjct: 182 NNQFSEI-PDCLFRLPSACDINLKENPLSQEILDQLNQRVNQTNYQGPKFQVSSPTPSFC 240

Query: 237 ---------------------------ELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
                                      E+ +   + L   +++ LP   GN   L  L+L
Sbjct: 241 SELMDQIIPRSEPILLDDALAQFCRFFEIHDTSMISLTEKNIQLLPSSFGNLINLFFLNL 300

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
            +N+L  +PD  GNL NL  L L  N+LE +P +      LN+ N+    L  LP     
Sbjct: 301 INNQLQTLPDSFGNLTNLQFLYLYNNKLELLPTSFGNLNQLNKLNLANNQLQILPQ-FFG 359

Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
           +LT++  + L+ NK    P+    + T +  +   +NQ+  +P  +F+   NL  +++ +
Sbjct: 360 NLTNLTKLYLNNNKLELLPTSF-GKLTQLKKLQIAYNQLQSLP-ELFTNLINLQTLDLNN 417

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
           N L +LP   G    L  LNL  NQ+  L     NL  L  L ++ N L+ LP S+ NL 
Sbjct: 418 NNLRTLPDSFGNLNRLHVLNLSNNQLQVLPHSFGNLTQLRDLHIAYNQLQSLPGSLTNLV 477

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
            L+ LDL  N L++LPN  G L ++  L L +NQ  SLP + G+LT L  L +  N +Q 
Sbjct: 478 NLQTLDLNNNNLQTLPNSFGNLNQINYLNLANNQFHSLPESFGNLTKLQCLYLYNNQIQI 537

Query: 510 IPEEIGTLENLHTLYLNDN 528
           +PE    L NL  L+LN N
Sbjct: 538 LPETFSNLINLTELHLNYN 556



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 162/387 (41%), Gaps = 71/387 (18%)

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           ++ E+ N   + LA  +L  LP   GN   L  LDL +N+L  +P+   NL NL  L L 
Sbjct: 122 KIFEIYNTRIISLAEKNLHILPSSFGNLNQLNHLDLTNNQLQTLPNSFENLTNLRSLNLC 181

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
            N+   +P+ L +     + N++   LS     +L  L         R   T Y   GP 
Sbjct: 182 NNQFSEIPDCLFRLPSACDINLKENPLS---QEILDQLNQ-------RVNQTNY--QGPK 229

Query: 354 QFTSVYSINFEHNQIDKI--------------PYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
              S  + +F    +D+I               +  F    + S +++ +  +  LP   
Sbjct: 230 FQVSSPTPSFCSELMDQIIPRSEPILLDDALAQFCRFFEIHDTSMISLTEKNIQLLPSSF 289

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG------------- 446
           G  + L  LNL  NQ+  L +   NL NL+ L L NN L+ LP+S G             
Sbjct: 290 GNLINLFFLNLINNQLQTLPDSFGNLTNLQFLYLYNNKLELLPTSFGNLNQLNKLNLANN 349

Query: 447 ----------NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
                     NL  L  L L  NKLE LP   G L +L++L +  NQL SLP    +L N
Sbjct: 350 QLQILPQFFGNLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQIAYNQLQSLPELFTNLIN 409

Query: 497 LSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC----------------------LNNI 534
           L  L +  NNL+++P+  G L  LH L L++N                        L ++
Sbjct: 410 LQTLDLNNNNLRTLPDSFGNLNRLHVLNLSNNQLQVLPHSFGNLTQLRDLHIAYNQLQSL 469

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEI 561
           P  L    NLQ + L+N  L  +P+  
Sbjct: 470 PGSLTNLVNLQTLDLNNNNLQTLPNSF 496


>gi|391333506|ref|XP_003741154.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Metaseiulus occidentalis]
          Length = 608

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 148/500 (29%), Positives = 239/500 (47%), Gaps = 56/500 (11%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           L +L+L  N+L +LP +I  + +LT L L +N+++ LP  + +L  L  L+L HNK+ EL
Sbjct: 89  LSKLFLGSNRLTTLPPEIAQLEHLTILELQDNNISKLPQQMESLSNLIRLNLSHNKMTEL 148

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  +  L  L++L L  N IK+V  +I  L +L  L +  NK++ELP     L     ++
Sbjct: 149 PDCLCHLKDLRVLALHHNEIKSVSDNINSLLSLDDLDLSHNKLKELPDAFTFLSRTKKIN 208

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           LA+N LE LP ++ +   LV LDL +N L  +P+ +G   +L +L   +NRLE++P   S
Sbjct: 209 LANNCLEALPADMDSMIQLVLLDLSNNCLTKLPEAIGRCGHLEQLVARHNRLETLP-PFS 267

Query: 306 KCVHL----------NEFNVEGC--------------ALSSLPDGLLSSLTSINNITLSR 341
           +  HL           EFNV  C               L+SLP+  +++L S+  + +  
Sbjct: 268 RENHLKELSVSFNAIKEFNVGHCEALVMLKILDLRSNKLASLPEE-IANLQSLERLDIGN 326

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL---- 397
           N+    P+        + S+  E N +  I   I  R        ++D L  S P+    
Sbjct: 327 NELKILPNSLGA-LNHINSLLVEGNPLRSIRQDILRRGTVYLMKYLRDRLKES-PMQQKI 384

Query: 398 ---------------DLGTWVGLTELNLGTNQISKLSEDIQNLV---NLEVLVLSNNLLK 439
                          D  T      L+     +S L E + ++     +  LVL+ N+  
Sbjct: 385 RKSRGGDGQELVDSVDRFTLKSSKTLDFSNKALSTLDEKVIDMACEDKINQLVLTRNIFV 444

Query: 440 KLPSSIGNL-RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
            +P ++  L ++L  LD   NKL S+P  +   K LQ + LQSNQL  LP  +  L N+ 
Sbjct: 445 TVPDTLERLAQQLTELDFSFNKLTSIPPFLSQAKHLQYMNLQSNQLSDLPPELSCLENIR 504

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE-LALCSNLQIMSLDNCPLSQI 557
            L++ +N    IP+ +   +    L  +DN+ L +I  E LA    L  + L N  +SQ+
Sbjct: 505 ELNISQNRFSKIPDCVYGWKRFEILLASDNS-LTSIDVENLAKIETLATLDLRNNSISQV 563

Query: 558 PSEIVVGGPSLIIRYLKMQG 577
           P E+   G  + I+ L++ G
Sbjct: 564 PPEL---GNLIQIKSLQLDG 580



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 205/452 (45%), Gaps = 75/452 (16%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGN-----------------------KLAS 138
           N++ L+LS + +T LP  +  L  L  L L+ N                       KL  
Sbjct: 134 NLIRLNLSHNKMTELPDCLCHLKDLRVLALHHNEIKSVSDNINSLLSLDDLDLSHNKLKE 193

Query: 139 LPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKIL 198
           LP    +++    + LA N L +LP  + ++ QL +LDL +N L +LP  + +   L+ L
Sbjct: 194 LPDAFTFLSRTKKINLANNCLEALPADMDSMIQLVLLDLSNNCLTKLPEAIGRCGHLEQL 253

Query: 199 YLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV---TLDLAHNHLEELP 255
             R NR++T+ P     ++L  LS+  N I+E    +G  + LV    LDL  N L  LP
Sbjct: 254 VARHNRLETL-PPFSRENHLKELSVSFNAIKEF--NVGHCEALVMLKILDLRSNKLASLP 310

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK--CVHLNEF 313
           +EI N   L  LD+ +NEL  +P+ LG L ++  L +  N L S+ + + +   V+L ++
Sbjct: 311 EEIANLQSLERLDIGNNELKILPNSLGALNHINSLLVEGNPLRSIRQDILRRGTVYLMKY 370

Query: 314 ----------------------------------------NVEGCALSSLPDGL--LSSL 331
                                                   +    ALS+L + +  ++  
Sbjct: 371 LRDRLKESPMQQKIRKSRGGDGQELVDSVDRFTLKSSKTLDFSNKALSTLDEKVIDMACE 430

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
             IN + L+RN F   P         +  ++F  N++  IP    S+AK+L  +N++ N 
Sbjct: 431 DKINQLVLTRNIFVTVPDTLERLAQQLTELDFSFNKLTSIP-PFLSQAKHLQYMNLQSNQ 489

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP-SSIGNLRK 450
           L+ LP +L     + ELN+  N+ SK+ + +      E+L+ S+N L  +   ++  +  
Sbjct: 490 LSDLPPELSCLENIRELNISQNRFSKIPDCVYGWKRFEILLASDNSLTSIDVENLAKIET 549

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
           L  LDL  N +  +P E+G L +++ L L  N
Sbjct: 550 LATLDLRNNSISQVPPELGNLIQIKSLQLDGN 581



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 97/181 (53%), Gaps = 3/181 (1%)

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           D  T + L++L LG+N+++ L  +I  L +L +L L +N + KLP  + +L  L  L+L 
Sbjct: 82  DWWTQMPLSKLFLGSNRLTTLPPEIAQLEHLTILELQDNNISKLPQQMESLSNLIRLNLS 141

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
            NK+  LP+ +  LK+L+ L L  N++ S+   I  L +L  L +  N L+ +P+    L
Sbjct: 142 HNKMTELPDCLCHLKDLRVLALHHNEIKSVSDNINSLLSLDDLDLSHNKLKELPDAFTFL 201

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGG--PSLIIRYLKM 575
                + L +N CL  +P ++     L ++ L N  L+++P  I   G    L+ R+ ++
Sbjct: 202 SRTKKINLANN-CLEALPADMDSMIQLVLLDLSNNCLTKLPEAIGRCGHLEQLVARHNRL 260

Query: 576 Q 576
           +
Sbjct: 261 E 261



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 24/152 (15%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + +  LD S + +T +PP + +  HL+ + L  N+L+ LP ++  + N+  L +++N  +
Sbjct: 455 QQLTELDFSFNKLTSIPPFLSQAKHLQYMNLQSNQLSDLPPELSCLENIRELNISQNRFS 514

Query: 161 SLPD------------------------SLANLQQLRVLDLRHNKLNELPMVVYKLTSLK 196
            +PD                        +LA ++ L  LDLR+N ++++P  +  L  +K
Sbjct: 515 KIPDCVYGWKRFEILLASDNSLTSIDVENLAKIETLATLDLRNNSISQVPPELGNLIQIK 574

Query: 197 ILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
            L L  N  +   P I   S   +L+   ++I
Sbjct: 575 SLQLDGNLFRNPRPAILAKSTQDILAYLRDRI 606


>gi|270015218|gb|EFA11666.1| hypothetical protein TcasGA2_TC008530 [Tribolium castaneum]
          Length = 621

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 219/485 (45%), Gaps = 93/485 (19%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           L  L L  N L  +P +IG   +LT L L +N++TSLP  + NL +L  L+L HNK+N L
Sbjct: 90  LNYLDLSSNVLQEIPGKIGMFEDLTALNLQDNNITSLPPEICNLTKLTKLNLSHNKINLL 149

Query: 186 PMVVYKLTSLKILYLRFNRIKTVH-----------------------PDIQYLSNLSMLS 222
           PM  YKL  L++L L  N ++ +                        P + +L  L+ ++
Sbjct: 150 PMEFYKLVELQVLSLAHNNLEKISKNFADLVMLQQLDLSHNILTKLPPGMGFLVRLTEIN 209

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  NK+ ELPP++  L+ L+ LD+ HN L  LPK +G    L  L  QHN +  IPD  G
Sbjct: 210 LSHNKLIELPPDIVNLRGLLKLDVTHNDLVYLPK-MGELAKLQFLYAQHNNIEEIPDFEG 268

Query: 283 -----------------------NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA 319
                                  N+ NL  L L  N++E +P  ++   HL   ++    
Sbjct: 269 CTHLQQVYFGNNYIKEVTTDFCENMSNLKILDLRDNKIEQIPNEIAMLQHLIRLDLTNND 328

Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYPS----GG------------------------ 351
           L+ LP+  L  L  + N+ L  NK          GG                        
Sbjct: 329 LTDLPNS-LGLLAHLQNLQLEGNKLKKIRGDIIKGGTMRILKHLKEQLDDEDLESVPKVS 387

Query: 352 ---------PTQFTSVY--SINFEHNQIDKIPYGIFSRAKNLSKVNMKD---NLLTSLPL 397
                    P ++T  +  S+N    Q+  +P  +F  AK L++V + D   N L S+P 
Sbjct: 388 TMQHEAKTFPDKYTIKHSRSLNVTMKQLTSVPDDVFEEAK-LAEVTIVDLCKNKLPSVPN 446

Query: 398 DLGTWV-GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            +      LTELNL  N IS++ E I N + L+   L NNLL  LP  + +L  L+ L L
Sbjct: 447 GIQLVAENLTELNLSMNAISEIPEFISNCIKLKYFDLGNNLLSDLPECLSSLVGLRELVL 506

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSL-PRAIGHLTNLSYLSVGENNLQSIPEEIG 515
             N+   +P+ +  +  L+ L+   N++  +    + +LT ++ L +  NN+  IP E+G
Sbjct: 507 SNNRFVHIPDCVYSMVGLEILLASDNKITDINVEGLKNLTRIATLDLTNNNMSHIPPELG 566

Query: 516 TLENL 520
            +  L
Sbjct: 567 NVTQL 571



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 173/370 (46%), Gaps = 37/370 (10%)

Query: 152 LGLAENSLTSLPDSLANLQQLRVLD-LRHNKLNELPMV--VYKLTSLKILYLRFNRIKTV 208
           L L+  SL  +P+ +  + +L   D  ++   N+ P     ++   L  L L  N ++ +
Sbjct: 44  LNLSGRSLAHVPEKMFTMYELTEEDTAKYIDFNKEPEEENWWQFKPLNYLDLSSNVLQEI 103

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
              I    +L+ L+++DN I  LPPE+  L  L  L+L+HN +  LP E      L  L 
Sbjct: 104 PGKIGMFEDLTALNLQDNNITSLPPEICNLTKLTKLNLSHNKINLLPMEFYKLVELQVLS 163

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
           L HN L  I     +L+ L +L LS+N L  +P  +   V L E N+    L  LP  ++
Sbjct: 164 LAHNNLEKISKNFADLVMLQQLDLSHNILTKLPPGMGFLVRLTEINLSHNKLIELPPDIV 223

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
            +L  +  + ++ N     P  G  +   +  +  +HN I++IP                
Sbjct: 224 -NLRGLLKLDVTHNDLVYLPKMG--ELAKLQFLYAQHNNIEEIP---------------- 264

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI-QNLVNLEVLVLSNNLLKKLPSSIGN 447
                    D      L ++  G N I +++ D  +N+ NL++L L +N ++++P+ I  
Sbjct: 265 ---------DFEGCTHLQQVYFGNNYIKEVTTDFCENMSNLKILDLRDNKIEQIPNEIAM 315

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI---GHLTNLSYL--SV 502
           L+ L  LDL  N L  LPN +G L  LQ L L+ N+L  +   I   G +  L +L   +
Sbjct: 316 LQHLIRLDLTNNDLTDLPNSLGLLAHLQNLQLEGNKLKKIRGDIIKGGTMRILKHLKEQL 375

Query: 503 GENNLQSIPE 512
            + +L+S+P+
Sbjct: 376 DDEDLESVPK 385



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 154/291 (52%), Gaps = 7/291 (2%)

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L LS N L+ +P  +     L   N++   ++SLP  +  +LT +  + LS NK   
Sbjct: 90  LNYLDLSSNVLQEIPGKIGMFEDLTALNLQDNNITSLPPEI-CNLTKLTKLNLSHNKINL 148

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P     +   +  ++  HN ++KI    F+    L ++++  N+LT LP  +G  V LT
Sbjct: 149 LPMEF-YKLVELQVLSLAHNNLEKISKN-FADLVMLQQLDLSHNILTKLPPGMGFLVRLT 206

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
           E+NL  N++ +L  DI NL  L  L +++N L  LP  +G L KL+ L  + N +E +P+
Sbjct: 207 EINLSHNKLIELPPDIVNLRGLLKLDVTHNDLVYLPK-MGELAKLQFLYAQHNNIEEIPD 265

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIG-HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
             G    LQ++   +N +  +      +++NL  L + +N ++ IP EI  L++L  L L
Sbjct: 266 FEG-CTHLQQVYFGNNYIKEVTTDFCENMSNLKILDLRDNKIEQIPNEIAMLQHLIRLDL 324

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQ 576
            +N  L ++P  L L ++LQ + L+   L +I  +I+ GG   I+++LK Q
Sbjct: 325 TNND-LTDLPNSLGLLAHLQNLQLEGNKLKKIRGDIIKGGTMRILKHLKEQ 374



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 107/233 (45%), Gaps = 46/233 (19%)

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN----------- 424
           + + K L+ +++  N+L  +P  +G +  LT LNL  N I+ L  +I N           
Sbjct: 84  WWQFKPLNYLDLSSNVLQEIPGKIGMFEDLTALNLQDNNITSLPPEICNLTKLTKLNLSH 143

Query: 425 ------------LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
                       LV L+VL L++N L+K+  +  +L  L+ LDL  N L  LP  +GFL 
Sbjct: 144 NKINLLPMEFYKLVELQVLSLAHNNLEKISKNFADLVMLQQLDLSHNILTKLPPGMGFLV 203

Query: 473 ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN---- 528
            L  + L  N+L+ LP  I +L  L  L V  N+L  +P ++G L  L  LY   N    
Sbjct: 204 RLTEINLSHNKLIELPPDIVNLRGLLKLDVTHNDLVYLP-KMGELAKLQFLYAQHNNIEE 262

Query: 529 -------TCLNNIPF--------ELALC---SNLQIMSLDNCPLSQIPSEIVV 563
                  T L  + F            C   SNL+I+ L +  + QIP+EI +
Sbjct: 263 IPDFEGCTHLQQVYFGNNYIKEVTTDFCENMSNLKILDLRDNKIEQIPNEIAM 315


>gi|359751205|emb|CCF03505.1| receptor kinase [Arabidopsis lyrata]
          Length = 1162

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 164/486 (33%), Positives = 242/486 (49%), Gaps = 51/486 (10%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-L 162
           LDL+ ++ T  +P  + KLT L EL LY N    S+PSQI  + NL  L L  N LT  +
Sbjct: 101 LDLTSNNFTGEIPAEIGKLTELNELSLYLNYFSGSIPSQIWELKNLMSLDLRNNLLTGDV 160

Query: 163 PDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSM 220
           P ++   + L V+ + +N L   +P  +  L  L++     NR+    P  +  L NL+ 
Sbjct: 161 PKAICKTRTLVVVGVGNNNLTGNIPDCLGDLVHLEVFVADINRLSGSIPVTVGTLVNLTN 220

Query: 221 LSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-I 277
           L +  N++   +P E+G L N+  L L  N LE E+P EIGNCT L+ L+L  N+L   I
Sbjct: 221 LDLSGNQLTGRIPREIGNLLNIQALVLFDNLLEGEIPAEIGNCTTLIDLELYGNQLTGRI 280

Query: 278 PDMLGNLINLTRLRLSYNRL-ESVPETLSKCVHLNEFNV-EGCALSSLPDGLLSSLTSIN 335
           P  LGNL+ L  LRL  N L  S+P +L +   L    + E   +  +P+  + SL S+ 
Sbjct: 281 PAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLRYLGLSENQLVGPIPEE-IGSLKSLQ 339

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI-DKIPY--GIFSRAKNLSKVNMKDNLL 392
            +TL  N  T       T   ++  +    N I  ++P   G+ +  +NLS     DN L
Sbjct: 340 VLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGELPADLGLLTNLRNLSA---HDNHL 396

Query: 393 TS-------------------------LPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLV 426
           T                          +P  LG+ + LT L+LG N+ + ++ +DI N  
Sbjct: 397 TGPIPSSISNCTGLKLLDLSFNKMTGKIPWGLGS-LNLTALSLGPNRFTGEIPDDIFNCS 455

Query: 427 NLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQL 484
           N+E L L+ NNL   L   IG L+KL+   +  N L   +P EIG L+EL  L L SN+ 
Sbjct: 456 NMETLNLAGNNLTGTLKPLIGKLKKLRIFQVSSNSLTGKIPGEIGNLRELILLYLHSNRF 515

Query: 485 V-SLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
             ++PR I +LT L  L +  N+L+  IPEE+  +  L  L L+ N     IP   AL S
Sbjct: 516 TGTIPREISNLTLLQGLGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIP---ALFS 572

Query: 543 NLQIMS 548
            LQ ++
Sbjct: 573 KLQSLT 578



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 137/429 (31%), Positives = 204/429 (47%), Gaps = 84/429 (19%)

Query: 162 LPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           L  ++ANL  L+VLDL  N    E+P  + KLT L  L L  N          Y S    
Sbjct: 88  LSPAIANLTYLQVLDLTSNNFTGEIPAEIGKLTELNELSLYLN----------YFSG--- 134

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELV-NIP 278
                     +P ++ ELKNL++LDL +N L  ++PK I     LV + + +N L  NIP
Sbjct: 135 ---------SIPSQIWELKNLMSLDLRNNLLTGDVPKAICKTRTLVVVGVGNNNLTGNIP 185

Query: 279 DMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           D LG+L++L       NRL  S+P T+   V+L                         N+
Sbjct: 186 DCLGDLVHLEVFVADINRLSGSIPVTVGTLVNL------------------------TNL 221

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS-LP 396
            LS N+ T                        +IP  I     N+  + + DNLL   +P
Sbjct: 222 DLSGNQLTG-----------------------RIPREI-GNLLNIQALVLFDNLLEGEIP 257

Query: 397 LDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVL-SNNLLKKLPSSIGNLRKLKCL 454
            ++G    L +L L  NQ++ ++  ++ NLV LE L L  NNL   LPSS+  L +L+ L
Sbjct: 258 AEIGNCTTLIDLELYGNQLTGRIPAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLRYL 317

Query: 455 DLEENKLES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IP 511
            L EN+L   +P EIG LK LQ L L SN L    P++I +L NL+ +++G N +   +P
Sbjct: 318 GLSENQLVGPIPEEIGSLKSLQVLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGELP 377

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIR 571
            ++G L NL  L  +DN     IP  ++ C+ L+++ L     +++  +I  G  SL + 
Sbjct: 378 ADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLKLLDLS---FNKMTGKIPWGLGSLNLT 434

Query: 572 YLKMQGPYR 580
            L + GP R
Sbjct: 435 ALSL-GPNR 442



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 195/431 (45%), Gaps = 65/431 (15%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
            P S+  L +L  + +  N ++  LP+ +G +TNL  L   +N LT  +P S++N   L+
Sbjct: 352 FPQSITNLRNLTVMTMGFNYISGELPADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLK 411

Query: 174 VLDLRHNKL------------------------NELPMVVYKLTSLKILYLRFNRI-KTV 208
           +LDL  NK+                         E+P  ++  ++++ L L  N +  T+
Sbjct: 412 LLDLSFNKMTGKIPWGLGSLNLTALSLGPNRFTGEIPDDIFNCSNMETLNLAGNNLTGTL 471

Query: 209 HPDIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVT 266
            P I  L  L +  +  N +  ++P E+G L+ L+ L L  N     +P+EI N T+L  
Sbjct: 472 KPLIGKLKKLRIFQVSSNSLTGKIPGEIGNLRELILLYLHSNRFTGTIPREISNLTLLQG 531

Query: 267 LDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE-------------------------SV 300
           L L  N+L   IP+ + +++ L+ L LS N+                           S+
Sbjct: 532 LGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIPALFSKLQSLTYLGLHGNKFNGSI 591

Query: 301 PETLSKCVHLNEFNVEGCALS-SLPDGLLSSLTSIN-NITLSRNKFTAYPSGGPTQFTSV 358
           P +L     LN F++ G  L+ ++P+ LLSS+ ++   +  S N  T   S    +   V
Sbjct: 592 PASLKSLSLLNTFDISGNLLTETIPEELLSSMKNMQLYLNFSNNFLTGTISNELGKLEMV 651

Query: 359 YSINFEHNQI-DKIPYGIFSRAKNLSKVNM-KDNLLTSLPLDL---GTWVGLTELNLGTN 413
             I+F +N     IP  +    KN+  ++  ++NL   +P ++   G    +  LNL  N
Sbjct: 652 QEIDFSNNLFSGSIPRSL-KACKNVFTLDFSRNNLSGQIPDEVFHQGGMDMIISLNLSRN 710

Query: 414 QISK-LSEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
            +S  + E   NL +L  L LS NNL  ++P S+  L  LK L L  N L+    E G  
Sbjct: 711 SLSGGIPEGFGNLTHLVSLDLSSNNLTGEIPESLAYLSTLKHLKLASNHLKGHVPETGVF 770

Query: 472 KELQRLILQSN 482
           K +    L  N
Sbjct: 771 KNINASDLMGN 781


>gi|440791488|gb|ELR12726.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 623

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 218/459 (47%), Gaps = 35/459 (7%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN+  LDLS + +  LP  V     L  L L  N+L  LP  +G ++ L+ L LA N L 
Sbjct: 138 ENLTTLDLSHNKLARLPDEVANARQLVHLLLQNNELCCLPEALGCLSALSNLNLAHNRLV 197

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYK-LTSLKILYLRFNR------IKTVHPDIQ 213
            LP ++A L ++ VLDL  NKL  LP        +L+ L LR N+      + +  P   
Sbjct: 198 ELPATMALLPRIEVLDLSANKLTSLPAEARNGWGTLRELELRGNQLAGLPAVTSKDPTAG 257

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
           +   L+ L +  N++RELP ++    +L  L  A N L+ LP E+   T L  LDL+ N 
Sbjct: 258 W-PLLARLDLSQNRLRELPSDVALFYSLRELYAAKNLLQSLPAELNTLTSLAILDLKENS 316

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL----- 328
           L +      + + L  L LS N L+++P  L +   L    + G  L     G++     
Sbjct: 317 LTHFKKEHFSNLALQILDLSLNSLKTIPPALGRMTTLKTLAIAGNPLMGFKRGVIDQGTD 376

Query: 329 -----------------SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
                             + TS   I  S     ++      +F+S  +++   N +  +
Sbjct: 377 EILKYLRFRLPPDDQAKQTATSFALIVESAYNERSHSLDLSAKFSSPSNLSLAKNGLTAL 436

Query: 372 PYGI--FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
           P  I  F R   L ++++ DN LT+LPL+LG  V L EL L  N ++++   +  L  L 
Sbjct: 437 PAQIEAFGR---LRRLDLGDNKLTALPLELGKCVLLEELILQKNSLTEIPAVVFELTRLT 493

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR 489
            L +S N +  LP  I  L  L  L   +N + +LP+E+  L +L  L +  N++ +L  
Sbjct: 494 ELDISFNRITVLPPGIAQLVSLTILRARQNSIRALPSELYMLPKLDVLDVFFNKIETLDV 553

Query: 490 AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            +  LT+L  L +G N++ ++P ++G + +L +L L  N
Sbjct: 554 ELTKLTSLRALDLGSNDIVTVPPQLGLMTSLRSLNLEGN 592



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 175/364 (48%), Gaps = 30/364 (8%)

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NKI  + P+L +L+NL TLDL+HN L  LP E+ N   LV L LQ+NEL  +P+ LG L 
Sbjct: 125 NKIVSISPQLFQLENLTTLDLSHNKLARLPDEVANARQLVHLLLQNNELCCLPEALGCLS 184

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L+ L L++NRL  +P T++    +   ++    L+SLP    +   ++  + L  N+  
Sbjct: 185 ALSNLNLAHNRLVELPATMALLPRIEVLDLSANKLTSLPAEARNGWGTLRELELRGNQLA 244

Query: 346 AYP---SGGPTQ-FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
             P   S  PT  +  +  ++   N++ ++P  + +   +L ++    NLL SLP +L T
Sbjct: 245 GLPAVTSKDPTAGWPLLARLDLSQNRLRELPSDV-ALFYSLRELYAAKNLLQSLPAELNT 303

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L+L  N ++   ++  + + L++L LS N LK +P ++G +  LK L +  N L
Sbjct: 304 LTSLAILDLKENSLTHFKKEHFSNLALQILDLSLNSLKTIPPALGRMTTLKTLAIAGNPL 363

Query: 462 ESLPNEI------GFLKELQRLILQSNQLVSLPRAIGHLTNLSY---------------- 499
                 +        LK L+  +   +Q      +   +   +Y                
Sbjct: 364 MGFKRGVIDQGTDEILKYLRFRLPPDDQAKQTATSFALIVESAYNERSHSLDLSAKFSSP 423

Query: 500 --LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQI 557
             LS+ +N L ++P +I     L  L L DN  L  +P EL  C  L+ + L    L++I
Sbjct: 424 SNLSLAKNGLTALPAQIEAFGRLRRLDLGDNK-LTALPLELGKCVLLEELILQKNSLTEI 482

Query: 558 PSEI 561
           P+ +
Sbjct: 483 PAVV 486



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 201/466 (43%), Gaps = 66/466 (14%)

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
           K  HL+EL+                T +     A+N + S+   L  L+ L  LDL HNK
Sbjct: 106 KRKHLQELW----------------TEVNTFCAAQNKIVSISPQLFQLENLTTLDLSHNK 149

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L  LP  V     L  L L+ N +  +   +  LS LS L++  N++ ELP  +  L  +
Sbjct: 150 LARLPDEVANARQLVHLLLQNNELCCLPEALGCLSALSNLNLAHNRLVELPATMALLPRI 209

Query: 242 VTLDLAHNHLEELPKEIGN-CTMLVTLDLQHNELVNIP-----DMLGNLINLTRLRLSYN 295
             LDL+ N L  LP E  N    L  L+L+ N+L  +P     D       L RL LS N
Sbjct: 210 EVLDLSANKLTSLPAEARNGWGTLRELELRGNQLAGLPAVTSKDPTAGWPLLARLDLSQN 269

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
           RL  +P  ++    L E       L SLP   L++LTS+  + L  N  T +     +  
Sbjct: 270 RLRELPSDVALFYSLRELYAAKNLLQSLP-AELNTLTSLAILDLKENSLTHFKKEHFSNL 328

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
            ++  ++   N +  IP  +  R   L  + +  N     PL +G   G+  ++ GT++I
Sbjct: 329 -ALQILDLSLNSLKTIPPAL-GRMTTLKTLAIAGN-----PL-MGFKRGV--IDQGTDEI 378

Query: 416 SKL--------SEDIQNLVNLEVLV------------------------LSNNLLKKLPS 443
            K          +  Q   +  ++V                        L+ N L  LP+
Sbjct: 379 LKYLRFRLPPDDQAKQTATSFALIVESAYNERSHSLDLSAKFSSPSNLSLAKNGLTALPA 438

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
            I    +L+ LDL +NKL +LP E+G    L+ LILQ N L  +P  +  LT L+ L + 
Sbjct: 439 QIEAFGRLRRLDLGDNKLTALPLELGKCVLLEELILQKNSLTEIPAVVFELTRLTELDIS 498

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
            N +  +P  I  L +L  L    N+ +  +P EL +   L ++ +
Sbjct: 499 FNRITVLPPGIAQLVSLTILRARQNS-IRALPSELYMLPKLDVLDV 543



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 96/179 (53%)

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
           K +    L L  N L +LP+QI     L  L L +N LT+LP  L     L  L L+ N 
Sbjct: 419 KFSSPSNLSLAKNGLTALPAQIEAFGRLRRLDLGDNKLTALPLELGKCVLLEELILQKNS 478

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L E+P VV++LT L  L + FNRI  + P I  L +L++L  R N IR LP EL  L  L
Sbjct: 479 LTEIPAVVFELTRLTELDISFNRITVLPPGIAQLVSLTILRARQNSIRALPSELYMLPKL 538

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESV 300
             LD+  N +E L  E+   T L  LDL  N++V +P  LG + +L  L L  NR+ ++
Sbjct: 539 DVLDVFFNKIETLDVELTKLTSLRALDLGSNDIVTVPPQLGLMTSLRSLNLEGNRIRAI 597



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 85/153 (55%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDL  + +T LP  + K   LEEL L  N L  +P+ +  +T LT L ++ N +T LP  
Sbjct: 449 LDLGDNKLTALPLELGKCVLLEELILQKNSLTEIPAVVFELTRLTELDISFNRITVLPPG 508

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +A L  L +L  R N +  LP  +Y L  L +L + FN+I+T+  ++  L++L  L +  
Sbjct: 509 IAQLVSLTILRARQNSIRALPSELYMLPKLDVLDVFFNKIETLDVELTKLTSLRALDLGS 568

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEI 258
           N I  +PP+LG + +L +L+L  N +  +   I
Sbjct: 569 NDIVTVPPQLGLMTSLRSLNLEGNRIRAIRPAI 601



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 130/276 (47%), Gaps = 32/276 (11%)

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
           T +N    ++NK  +  S    Q  ++ +++  HN++ ++P  + + A+ L  + +++N 
Sbjct: 115 TEVNTFCAAQNKIVSI-SPQLFQLENLTTLDLSHNKLARLPDEV-ANARQLVHLLLQNNE 172

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS----SIGN 447
           L  LP  LG    L+ LNL  N++ +L   +  L  +EVL LS N L  LP+      G 
Sbjct: 173 LCCLPEALGCLSALSNLNLAHNRLVELPATMALLPRIEVLDLSANKLTSLPAEARNGWGT 232

Query: 448 LRKLKC-------------------------LDLEENKLESLPNEIGFLKELQRLILQSN 482
           LR+L+                          LDL +N+L  LP+++     L+ L    N
Sbjct: 233 LRELELRGNQLAGLPAVTSKDPTAGWPLLARLDLSQNRLRELPSDVALFYSLRELYAAKN 292

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
            L SLP  +  LT+L+ L + EN+L    +E  +   L  L L+ N+ L  IP  L   +
Sbjct: 293 LLQSLPAELNTLTSLAILDLKENSLTHFKKEHFSNLALQILDLSLNS-LKTIPPALGRMT 351

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGP 578
            L+ +++   PL      ++  G   I++YL+ + P
Sbjct: 352 TLKTLAIAGNPLMGFKRGVIDQGTDEILKYLRFRLP 387



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 63/123 (51%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD+S + IT LPP + +L  L  L    N + +LPS++  +  L  L +  N + +L   
Sbjct: 495 LDISFNRITVLPPGIAQLVSLTILRARQNSIRALPSELYMLPKLDVLDVFFNKIETLDVE 554

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L  L  LR LDL  N +  +P  +  +TSL+ L L  NRI+ + P I      S+L    
Sbjct: 555 LTKLTSLRALDLGSNDIVTVPPQLGLMTSLRSLNLEGNRIRAIRPAILQQGTSSLLEYLR 614

Query: 226 NKI 228
           N+I
Sbjct: 615 NRI 617


>gi|426215732|ref|XP_004002123.1| PREDICTED: leucine-rich repeat-containing protein 40 [Ovis aries]
          Length = 602

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 241/481 (50%), Gaps = 10/481 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN+  L++S + +  LP  +  L +L+ LYL  N+L  +P     ++NL  L L+ N LT
Sbjct: 128 ENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLT 187

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++P S + L  L  L+L  N+L  LP  +  +  LK L    N ++T+ P++  + +L +
Sbjct: 188 TVPASFSFLSSLVRLNLSSNQLKSLPAELSGMKRLKHLDCNSNLLETIPPELASMESLEL 247

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE-IGNCTMLVTLDLQHNELVNIPD 279
           L +R NK+R LP E    K L  L +  N +E+L  E + +   ++ LDL+ N+L ++PD
Sbjct: 248 LYLRRNKLRFLP-EFPSCKLLKELHVGENQIEKLGAEHLKHLNSILVLDLRDNKLKSVPD 306

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +  L +L RL LS N + S+P +L + +HL    +EG  L ++   +++  T    +  
Sbjct: 307 EITLLQSLERLDLSNNDISSLPCSLGR-LHLKFLALEGNPLRTIRREIINKGTQ-EVLKY 364

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
            R+K       GP+Q  SV           ++        K L   + +  L+     D 
Sbjct: 365 LRSKIK---DDGPSQNDSVTETAMTLPSESRVNVHTILTLKMLDYSDKQTALIPDEVFDA 421

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV-LSNNLLKKLPSSIGNLRKLKCLDLEE 458
                +T +N   NQ+ ++ + I  L  +   V LS N L  +   +  L+KL  LDL  
Sbjct: 422 VKSNIITSINFSKNQLCEIPKRIVELKEMVSDVNLSYNKLSSISLELCTLQKLTFLDLRN 481

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI-PEEIGTL 517
           N L SLP E+  L  LQ + L  N+   LP  +  +  L  + +  N + ++ P+++ T+
Sbjct: 482 NFLNSLPEEMESLTRLQTINLSFNRFKILPEVLYRIPTLETVLISNNQVGALDPQKMKTM 541

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQG 577
           ENL TL L +N  L  IP EL  C NL+ + LD  P     + I++ G + I+ YL+ + 
Sbjct: 542 ENLITLDLQNNDLLQ-IPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRI 600

Query: 578 P 578
           P
Sbjct: 601 P 601



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 200/397 (50%), Gaps = 54/397 (13%)

Query: 190 YKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHN 249
           ++ T L  L +  N+++++  D++ L  L++L + DN++  LP  + EL+NL  L+++HN
Sbjct: 79  WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN 138

Query: 250 HLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVH 309
            L+ LP+EI N   L  L LQHNEL  IP+    L NL  L LS NRL +VP + S    
Sbjct: 139 KLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLTTVPASFS---- 194

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
                             LSSL  +N   LS N+  + P+   +    +  ++   N ++
Sbjct: 195 -----------------FLSSLVRLN---LSSNQLKSLPAEL-SGMKRLKHLDCNSNLLE 233

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL-SEDIQNLVNL 428
            IP  + S  ++L  + ++ N L  LP +  +   L EL++G NQI KL +E +++L ++
Sbjct: 234 TIPPELAS-MESLELLYLRRNKLRFLP-EFPSCKLLKELHVGENQIEKLGAEHLKHLNSI 291

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
            VL L +N LK +P  I  L+ L+ LDL  N + SLP  +G L  L+ L L+ N L ++ 
Sbjct: 292 LVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGRL-HLKFLALEGNPLRTIR 350

Query: 489 RAI---GHLTNLSYLSV-----GENNLQSIPEEIGTLE-----NLHTL-------YLNDN 528
           R I   G    L YL       G +   S+ E   TL      N+HT+       Y +  
Sbjct: 351 REIINKGTQEVLKYLRSKIKDDGPSQNDSVTETAMTLPSESRVNVHTILTLKMLDYSDKQ 410

Query: 529 TCLNNIPFEL--ALCSN-LQIMSLDNCPLSQIPSEIV 562
           T L  IP E+  A+ SN +  ++     L +IP  IV
Sbjct: 411 TAL--IPDEVFDAVKSNIITSINFSKNQLCEIPKRIV 445



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 173/332 (52%), Gaps = 7/332 (2%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L+L+  +L E+P+ +    + +  +   N   N  +      +LT+L +S N+L+S+ + 
Sbjct: 41  LNLSGRNLSEVPQCVWRINVDIPEEANQNLSFNASERWWEQTDLTKLIISNNKLQSLTDD 100

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           L     L   ++    L+SLP   +  L ++  + +S NK    P    T   ++  +  
Sbjct: 101 LRLLPALTVLDIHDNQLTSLPSA-IRELENLQKLNVSHNKLKILPE-EITNLRNLKGLYL 158

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
           +HN++  IP G F +  NL  +++ +N LT++P        L  LNL +NQ+  L  ++ 
Sbjct: 159 QHNELTCIPEG-FEQLSNLEDLDLSNNRLTTVPASFSFLSSLVRLNLSSNQLKSLPAELS 217

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
            +  L+ L  ++NLL+ +P  + ++  L+ L L  NKL  LP E    K L+ L +  NQ
Sbjct: 218 GMKRLKHLDCNSNLLETIPPELASMESLELLYLRRNKLRFLP-EFPSCKLLKELHVGENQ 276

Query: 484 LVSL-PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           +  L    + HL ++  L + +N L+S+P+EI  L++L  L L++N  ++++P  L    
Sbjct: 277 IEKLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNND-ISSLPCSLGRL- 334

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
           +L+ ++L+  PL  I  EI+  G   +++YL+
Sbjct: 335 HLKFLALEGNPLRTIRREIINKGTQEVLKYLR 366



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 94/166 (56%), Gaps = 2/166 (1%)

Query: 86  QADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHL-EELYLYGNKLASLPSQIG 144
           Q  L  ++ F   K   I +++ SK+ +  +P  + +L  +  ++ L  NKL+S+  ++ 
Sbjct: 410 QTALIPDEVFDAVKSNIITSINFSKNQLCEIPKRIVELKEMVSDVNLSYNKLSSISLELC 469

Query: 145 YVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR 204
            +  LT L L  N L SLP+ + +L +L+ ++L  N+   LP V+Y++ +L+ + +  N+
Sbjct: 470 TLQKLTFLDLRNNFLNSLPEEMESLTRLQTINLSFNRFKILPEVLYRIPTLETVLISNNQ 529

Query: 205 IKTVHPD-IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHN 249
           +  + P  ++ + NL  L +++N + ++PPELG   NL TL L  N
Sbjct: 530 VGALDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGN 575


>gi|443690437|gb|ELT92575.1| hypothetical protein CAPTEDRAFT_148907, partial [Capitella teleta]
          Length = 600

 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 210/444 (47%), Gaps = 51/444 (11%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
           F +    ++  +D    ++T +P  + +    LEEL L  N++  LP     +  L  L 
Sbjct: 7   FWKGCNRHVDYIDKRHCNLTQIPEDILRYVRTLEELLLDANQIRELPRGFFRLAQLRKLT 66

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  + N   L+ LD+  N + ++P  +    +L++     N +  +     
Sbjct: 67  LSDNEIARLPPDIGNFMSLQELDISRNDITDIPENIKFCRNLQVADFSCNPLSRLPDGFT 126

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL+ L + D  +  LPP++G L NL +L+L  N L+ LP  +     L TLDL  N 
Sbjct: 127 QLRNLTHLGLNDVSLARLPPDIGSLSNLESLELRENLLKYLPSSLSFLVKLKTLDLGSNV 186

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L ++P+ +G+L +L  L L  N L  +P  +     L + +V    L  LPD + S L  
Sbjct: 187 LEDLPETIGSLPSLEELWLDCNELSELPPEIGNLKRLTQIDVSENKLERLPDEM-SGLLH 245

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ LS+N                         I+ +P GI     NL K+++      
Sbjct: 246 LTDLILSQNS------------------------IEYLPEGI----GNLRKLSI------ 271

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
                         L +  NQ+  L+  I N + ++ L+L+ NLL  +P+SIG ++ L  
Sbjct: 272 --------------LKMDQNQLLHLTPAIGNCIAMQELILTENLLSDVPTSIGRMKLLAN 317

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
            +++ N+L  +P EIG   +L  L L+ N+++ LP  IG+L  L  L V  N LQ +P  
Sbjct: 318 FNVDRNRLTEIPKEIGQCSKLGVLSLRDNRVLYLPSEIGNLKELHVLDVSGNRLQHLPIT 377

Query: 514 IGTLENLHTLYLNDNTCLNNIPFE 537
           +G+  NL  L+L++N     + F+
Sbjct: 378 MGSC-NLKALWLSENQAQPMLKFQ 400



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 200/400 (50%), Gaps = 30/400 (7%)

Query: 175 LDLRHNKLNELPMVVYK-LTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           +D RH  L ++P  + + + +L+ L L  N+I+ +      L+ L  L++ DN+I  LPP
Sbjct: 18  IDKRHCNLTQIPEDILRYVRTLEELLLDANQIRELPRGFFRLAQLRKLTLSDNEIARLPP 77

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           ++G   +L  LD++ N + ++P+ I  C  L   D   N L  +PD    L NLT L L+
Sbjct: 78  DIGNFMSLQELDISRNDITDIPENIKFCRNLQVADFSCNPLSRLPDGFTQLRNLTHLGLN 137

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              L  +P                      PD  + SL+++ ++ L  N     PS   +
Sbjct: 138 DVSLARLP----------------------PD--IGSLSNLESLELRENLLKYLPSS-LS 172

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
               + +++   N ++ +P  I S   +L ++ +  N L+ LP ++G    LT++++  N
Sbjct: 173 FLVKLKTLDLGSNVLEDLPETIGS-LPSLEELWLDCNELSELPPEIGNLKRLTQIDVSEN 231

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           ++ +L +++  L++L  L+LS N ++ LP  IGNLRKL  L +++N+L  L   IG    
Sbjct: 232 KLERLPDEMSGLLHLTDLILSQNSIEYLPEGIGNLRKLSILKMDQNQLLHLTPAIGNCIA 291

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           +Q LIL  N L  +P +IG +  L+  +V  N L  IP+EIG    L  L L DN  L  
Sbjct: 292 MQELILTENLLSDVPTSIGRMKLLANFNVDRNRLTEIPKEIGQCSKLGVLSLRDNRVL-Y 350

Query: 534 IPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYL 573
           +P E+     L ++ +    L  +P  I +G  +L   +L
Sbjct: 351 LPSEIGNLKELHVLDVSGNRLQHLP--ITMGSCNLKALWL 388


>gi|332214711|ref|XP_003256479.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Nomascus leucogenys]
          Length = 560

 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 145/520 (27%), Positives = 223/520 (42%), Gaps = 101/520 (19%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +D S  S+T +P  +   T LEE++L  N++  +P +I ++ N+  L L +N+L SL  +
Sbjct: 30  IDASNHSLTAIPLEIFTFTELEEVHLENNQIEEIPKEIQHLKNIRVLYLDKNNLRSLCPA 89

Query: 166 ------------------------LANLQQLRVLDLRHNKLNELPMVVYK---------- 191
                                   ++ L  LR L L    L E+P+V+ K          
Sbjct: 90  LGLLSSLESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVICKNLHHLELLGL 149

Query: 192 --------------LTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
                          T L+ +YL+ N+ +    ++  L  L ++ + +NKI  +P E+G 
Sbjct: 150 TGNHLKCLPKEIVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPEEIGH 209

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L  L    +A N+L  LP  +  C+ L  LDL HN L +IP  L  L  +T + LS NRL
Sbjct: 210 LTGLQKFYMASNNLPVLPASLCQCSQLSVLDLSHNLLRSIPKSLAKLRKMTEIGLSGNRL 269

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
           E VP  +             C  +SL       L  + N  L R +      G      +
Sbjct: 270 EKVPRLI-------------CGWTSL------HLLYLGNTGLHRLR------GSFRCLVN 304

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +  ++   N +D  P  I +  KNL  + + DN +  LP +LG+   L  L L  N+   
Sbjct: 305 LRCLDLSQNHLDHCPMQICA-LKNLEVLGLDDNRIGQLPSELGSLSKLKILGLTGNEFLS 363

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKL---PSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
             E++ +L +LE L +  +   KL   P  I  L+ LK L +E N LE LP  +G +  L
Sbjct: 364 FPEEVLSLASLEKLYIGQDQGFKLTYVPEHIRKLQSLKELYIENNHLEYLPVSLGSMPNL 423

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           + L  + N L  LP AI     L  L + +N L  +PE + +L NL  L L DN      
Sbjct: 424 EVLDCRHNLLKQLPDAICQAQALKELRLEDNLLTHLPENLDSLVNLKVLTLMDN------ 477

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
                             P+ + P E+   G   I +YLK
Sbjct: 478 ------------------PMEEPPKEVCAEGNEAIWKYLK 499



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 194/416 (46%), Gaps = 32/416 (7%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
            +D  ++ L  +P+ ++  T L+ ++L  N+I+ +  +IQ+L N+ +L +  N +R L P
Sbjct: 29  FIDASNHSLTAIPLEIFTFTELEEVHLENNQIEEIPKEIQHLKNIRVLYLDKNNLRSLCP 88

Query: 234 E------------------------LGELKNLVTLDLAHNHLEELPKEI-GNCTMLVTLD 268
                                    +  L  L  L L    L+E+P  I  N   L  L 
Sbjct: 89  ALGLLSSLESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVICKNLHHLELLG 148

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
           L  N L  +P  + N   L  + L  N+ E  P+ L     L   +++   + ++P+  +
Sbjct: 149 LTGNHLKCLPKEIVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPEE-I 207

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
             LT +    ++ N     P+    Q + +  ++  HN +  IP  + ++ + ++++ + 
Sbjct: 208 GHLTGLQKFYMASNNLPVLPA-SLCQCSQLSVLDLSHNLLRSIPKSL-AKLRKMTEIGLS 265

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
            N L  +P  +  W  L  L LG   + +L    + LVNL  L LS N L   P  I  L
Sbjct: 266 GNRLEKVPRLICGWTSLHLLYLGNTGLHRLRGSFRCLVNLRCLDLSQNHLDHCPMQICAL 325

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN-- 506
           + L+ L L++N++  LP+E+G L +L+ L L  N+ +S P  +  L +L  L +G++   
Sbjct: 326 KNLEVLGLDDNRIGQLPSELGSLSKLKILGLTGNEFLSFPEEVLSLASLEKLYIGQDQGF 385

Query: 507 -LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L  +PE I  L++L  LY+ +N  L  +P  L    NL+++   +  L Q+P  I
Sbjct: 386 KLTYVPEHIRKLQSLKELYIENNH-LEYLPVSLGSMPNLEVLDCRHNLLKQLPDAI 440


>gi|29119653|emb|CAD79350.1| LRR receptor-like kinase 2 [Arabidopsis thaliana]
          Length = 1120

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 159/477 (33%), Positives = 246/477 (51%), Gaps = 25/477 (5%)

Query: 106 LDLSKSS-ITHLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLT-SL 162
           LDLS +  +  +P S+ KL +LE L L  N+L   +P  I   + L  L L +N LT S+
Sbjct: 134 LDLSSNGLVGDIPWSLSKLRNLETLILNSNQLTGKIPPDISKCSKLKSLILFDNLLTGSI 193

Query: 163 PDSLANLQQLRVLDLRHNK--LNELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLS 219
           P  L  L  L V+ +  NK    ++P+ +   ++L +L L    +    P  +  L  L 
Sbjct: 194 PTELGKLSGLEVIRIGGNKEISGQIPLEIGDCSNLTVLGLAETSVSGNLPSSLGKLKKLE 253

Query: 220 MLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN- 276
            LS+    I  E+P +LG    LV L L  N L   +P+EIG  T L  L L  N LV  
Sbjct: 254 TLSIYTTMISGEIPSDLGNCSELVDLFLYENSLSGSIPREIGQLTKLEQLFLWQNSLVGG 313

Query: 277 IPDMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
           IP+ +GN  NL  + LS N L  S+P ++ +   L EF +     S      +S+ +S+ 
Sbjct: 314 IPEEIGNCSNLKMIDLSLNLLSGSIPSSIGRLSFLEEFMISDNKFSGSIPTTISNCSSLV 373

Query: 336 NITLSRNKFTA-YPS--GGPTQFTSVYSINFEHNQID-KIPYGIFSRAKNLSKVNMKDNL 391
            + L +N+ +   PS  G  T+ T  ++ +   NQ++  IP G+ +   +L  +++  N 
Sbjct: 374 QLQLDKNQISGLIPSELGTLTKLTLFFAWS---NQLEGSIPPGL-ADCTDLQALDLSRNS 429

Query: 392 LT-SLPLDLGTWVGLTELNLGTNQISK-LSEDIQNLVNLEVLVLS-NNLLKKLPSSIGNL 448
           LT ++P  L     LT+L L +N +S  + ++I N  +L  L L  N +  ++PS IG+L
Sbjct: 430 LTGTIPSGLFMLRNLTKLLLISNSLSGFIPQEIGNCSSLVRLRLGFNRITGEIPSGIGSL 489

Query: 449 RKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQL-VSLPRAIGHLTNLSYLSVGENN 506
           +K+  LD   N+L   +P+EIG   ELQ + L +N L  SLP  +  L+ L  L V  N 
Sbjct: 490 KKINFLDFSSNRLHGKVPDEIGSCSELQMIDLSNNSLEGSLPNPVSSLSGLQVLDVSANQ 549

Query: 507 LQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS-QIPSEI 561
               IP  +G L +L+ L L+ N    +IP  L +CS LQ++ L +  LS +IPSE+
Sbjct: 550 FSGKIPASLGRLVSLNKLILSKNLFSGSIPTSLGMCSGLQLLDLGSNELSGEIPSEL 606



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 146/463 (31%), Positives = 228/463 (49%), Gaps = 39/463 (8%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS--LPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQL 172
           +P  + KL+ LE + + GNK  S  +P +IG  +NLT LGLAE S++  LP SL  L++L
Sbjct: 193 IPTELGKLSGLEVIRIGGNKEISGQIPLEIGDCSNLTVLGLAETSVSGNLPSSLGKLKKL 252

Query: 173 RVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
             L +    +  E+P  +   + L  L+L  N +                         +
Sbjct: 253 ETLSIYTTMISGEIPSDLGNCSELVDLFLYENSLSG----------------------SI 290

Query: 232 PPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTR 289
           P E+G+L  L  L L  N L   +P+EIGNC+ L  +DL  N L   IP  +G L  L  
Sbjct: 291 PREIGQLTKLEQLFLWQNSLVGGIPEEIGNCSNLKMIDLSLNLLSGSIPSSIGRLSFLEE 350

Query: 290 LRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
             +S N+   S+P T+S C  L +  ++   +S L    L +LT +       N+     
Sbjct: 351 FMISDNKFSGSIPTTISNCSSLVQLQLDKNQISGLIPSELGTLTKLTLFFAWSNQLEGSI 410

Query: 349 SGGPTQFTSVYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLLTS-LPLDLGTWVGLT 406
             G    T + +++   N +   IP G+F   +NL+K+ +  N L+  +P ++G    L 
Sbjct: 411 PPGLADCTDLQALDLSRNSLTGTIPSGLF-MLRNLTKLLLISNSLSGFIPQEIGNCSSLV 469

Query: 407 ELNLGTNQIS-KLSEDIQNLVNLEVLVLSNNLL-KKLPSSIGNLRKLKCLDLEENKLE-S 463
            L LG N+I+ ++   I +L  +  L  S+N L  K+P  IG+  +L+ +DL  N LE S
Sbjct: 470 RLRLGFNRITGEIPSGIGSLKKINFLDFSSNRLHGKVPDEIGSCSELQMIDLSNNSLEGS 529

Query: 464 LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTLENLH 521
           LPN +  L  LQ L + +NQ    +P ++G L +L+ L + +N    SIP  +G    L 
Sbjct: 530 LPNPVSSLSGLQVLDVSANQFSGKIPASLGRLVSLNKLILSKNLFSGSIPTSLGMCSGLQ 589

Query: 522 TLYLNDNTCLNNIPFELALCSNLQI-MSLDNCPLS-QIPSEIV 562
            L L  N     IP EL    NL+I ++L +  L+ +IPS+I 
Sbjct: 590 LLDLGSNELSGEIPSELGDIENLEIALNLSSNRLTGKIPSKIA 632



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 202/411 (49%), Gaps = 65/411 (15%)

Query: 91  IEKEFLRCKEENILNLDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTN 148
           I  +   C E  +++L L ++S++  +P  + +LT LE+L+L+ N L   +P +IG  +N
Sbjct: 266 IPSDLGNCSE--LVDLFLYENSLSGSIPREIGQLTKLEQLFLWQNSLVGGIPEEIGNCSN 323

Query: 149 LTCLGLAENSLT-SLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIK 206
           L  + L+ N L+ S+P S+  L  L    +  NK    +P  +   +SL  L L  N+I 
Sbjct: 324 LKMIDLSLNLLSGSIPSSIGRLSFLEEFMISDNKFSGSIPTTISNCSSLVQLQLDKNQIS 383

Query: 207 TVHP-DIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLEE----------- 253
            + P ++  L+ L++     N++   +PP L +  +L  LDL+ N L             
Sbjct: 384 GLIPSELGTLTKLTLFFAWSNQLEGSIPPGLADCTDLQALDLSRNSLTGTIPSGLFMLRN 443

Query: 254 --------------LPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE 298
                         +P+EIGNC+ LV L L  N +   IP  +G+L  +  L  S NRL 
Sbjct: 444 LTKLLLISNSLSGFIPQEIGNCSSLVRLRLGFNRITGEIPSGIGSLKKINFLDFSSNRLH 503

Query: 299 S-VPETLSKCVHLNEFNVEGCAL-SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFT 356
             VP+ +  C  L   ++   +L  SLP+ + SSL+ +  + +S N+F+           
Sbjct: 504 GKVPDEIGSCSELQMIDLSNNSLEGSLPNPV-SSLSGLQVLDVSANQFSG---------- 552

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQI 415
                        KIP  +  R  +L+K+ +  NL + S+P  LG   GL  L+LG+N++
Sbjct: 553 -------------KIPASL-GRLVSLNKLILSKNLFSGSIPTSLGMCSGLQLLDLGSNEL 598

Query: 416 S-KLSEDIQNLVNLEVLV--LSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           S ++  ++ ++ NLE+ +   SN L  K+PS I +L KL  LDL  N LE 
Sbjct: 599 SGEIPSELGDIENLEIALNLSSNRLTGKIPSKIASLNKLSILDLSHNMLEG 649



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 166/347 (47%), Gaps = 17/347 (4%)

Query: 231 LPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELV-NIPDMLGNLINLT 288
           LP  L   ++L  L ++  +L   LP+ +G+C  L  LDL  N LV +IP  L  L NL 
Sbjct: 97  LPKNLPAFRSLQKLTISGANLTGTLPESLGDCLGLKVLDLSSNGLVGDIPWSLSKLRNLE 156

Query: 289 RLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            L L+ N+L   +P  +SKC  L    +    L+      L  L+ +  I +  NK  + 
Sbjct: 157 TLILNSNQLTGKIPPDISKCSKLKSLILFDNLLTGSIPTELGKLSGLEVIRIGGNKEISG 216

Query: 348 PSGGPTQFTSVYSINF----EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS-LPLDLGTW 402
               P +     ++      E +    +P  +  + K L  +++   +++  +P DLG  
Sbjct: 217 QI--PLEIGDCSNLTVLGLAETSVSGNLPSSL-GKLKKLETLSIYTTMISGEIPSDLGNC 273

Query: 403 VGLTELNLGTNQIS-KLSEDIQNLVNLEVLVL-SNNLLKKLPSSIGNLRKLKCLDLEENK 460
             L +L L  N +S  +  +I  L  LE L L  N+L+  +P  IGN   LK +DL  N 
Sbjct: 274 SELVDLFLYENSLSGSIPREIGQLTKLEQLFLWQNSLVGGIPEEIGNCSNLKMIDLSLNL 333

Query: 461 LE-SLPNEIGFLKELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTL 517
           L  S+P+ IG L  L+  ++  N+   S+P  I + ++L  L + +N +   IP E+GTL
Sbjct: 334 LSGSIPSSIGRLSFLEEFMISDNKFSGSIPTTISNCSSLVQLQLDKNQISGLIPSELGTL 393

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS-QIPSEIVV 563
             L   +   N    +IP  LA C++LQ + L    L+  IPS + +
Sbjct: 394 TKLTLFFAWSNQLEGSIPPGLADCTDLQALDLSRNSLTGTIPSGLFM 440



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 112/215 (52%), Gaps = 10/215 (4%)

Query: 91  IEKEFLRCKEENILNLDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTN 148
           I +E   C   +++ L L  + IT  +P  +  L  +  L    N+L   +P +IG  + 
Sbjct: 458 IPQEIGNCS--SLVRLRLGFNRITGEIPSGIGSLKKINFLDFSSNRLHGKVPDEIGSCSE 515

Query: 149 LTCLGLAENSL-TSLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIK 206
           L  + L+ NSL  SLP+ +++L  L+VLD+  N+   ++P  + +L SL  L L  N   
Sbjct: 516 LQMIDLSNNSLEGSLPNPVSSLSGLQVLDVSANQFSGKIPASLGRLVSLNKLILSKNLFS 575

Query: 207 TVHP-DIQYLSNLSMLSMRDNKIR-ELPPELGELKNL-VTLDLAHNHLE-ELPKEIGNCT 262
              P  +   S L +L +  N++  E+P ELG+++NL + L+L+ N L  ++P +I +  
Sbjct: 576 GSIPTSLGMCSGLQLLDLGSNELSGEIPSELGDIENLEIALNLSSNRLTGKIPSKIASLN 635

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
            L  LDL HN L      L N+ NL  L +SYN  
Sbjct: 636 KLSILDLSHNMLEGDLAPLANIENLVSLNISYNSF 670



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 130/271 (47%), Gaps = 32/271 (11%)

Query: 299 SVPETLSKCVHLNEFNVEGCALS-SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
           S+P+ L     L +  + G  L+ +LP+ L   L  +  + LS N          ++  +
Sbjct: 96  SLPKNLPAFRSLQKLTISGANLTGTLPESLGDCL-GLKVLDLSSNGLVGDIPWSLSKLRN 154

Query: 358 VYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTN-Q 414
           + ++    NQ+  KIP  I S+   L  + + DNLLT S+P +LG   GL  + +G N +
Sbjct: 155 LETLILNSNQLTGKIPPDI-SKCSKLKSLILFDNLLTGSIPTELGKLSGLEVIRIGGNKE 213

Query: 415 IS-KLSEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFL 471
           IS ++  +I +  NL VL L+  ++   LPSS+G L+KL+ L +    +   +P+++G  
Sbjct: 214 ISGQIPLEIGDCSNLTVLGLAETSVSGNLPSSLGKLKKLETLSIYTTMISGEIPSDLGNC 273

Query: 472 KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
            EL  L L  N L                        SIP EIG L  L  L+L  N+ +
Sbjct: 274 SELVDLFLYENSLSG----------------------SIPREIGQLTKLEQLFLWQNSLV 311

Query: 532 NNIPFELALCSNLQIMSLD-NCPLSQIPSEI 561
             IP E+  CSNL+++ L  N     IPS I
Sbjct: 312 GGIPEEIGNCSNLKMIDLSLNLLSGSIPSSI 342



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 124/254 (48%), Gaps = 34/254 (13%)

Query: 106 LDLSKSSITH-LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTS-L 162
           LDLS++S+T  +P  +  L +L +L L  N L+  +P +IG  ++L  L L  N +T  +
Sbjct: 423 LDLSRNSLTGTIPSGLFMLRNLTKLLLISNSLSGFIPQEIGNCSSLVRLRLGFNRITGEI 482

Query: 163 PDSLANLQQLRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSM 220
           P  + +L+++  LD   N+L+ ++P  +   + L+++ L  N ++   P+ +  LS L +
Sbjct: 483 PSGIGSLKKINFLDFSSNRLHGKVPDEIGSCSELQMIDLSNNSLEGSLPNPVSSLSGLQV 542

Query: 221 LSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-I 277
           L +  N+   ++P  LG L +L  L L+ N     +P  +G C+ L  LDL  NEL   I
Sbjct: 543 LDVSANQFSGKIPASLGRLVSLNKLILSKNLFSGSIPTSLGMCSGLQLLDLGSNELSGEI 602

Query: 278 PDMLGNLINL-------------------------TRLRLSYNRLESVPETLSKCVHLNE 312
           P  LG++ NL                         + L LS+N LE     L+   +L  
Sbjct: 603 PSELGDIENLEIALNLSSNRLTGKIPSKIASLNKLSILDLSHNMLEGDLAPLANIENLVS 662

Query: 313 FNVEGCALSS-LPD 325
            N+   + S  LPD
Sbjct: 663 LNISYNSFSGYLPD 676



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 3/115 (2%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNL-TCLGLAENSLTS-LPDSLANLQQL 172
           +P S+   + L+ L L  N+L+  +PS++G + NL   L L+ N LT  +P  +A+L +L
Sbjct: 578 IPTSLGMCSGLQLLDLGSNELSGEIPSELGDIENLEIALNLSSNRLTGKIPSKIASLNKL 637

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
            +LDL HN L      +  + +L  L + +N      PD +    LS   +  NK
Sbjct: 638 SILDLSHNMLEGDLAPLANIENLVSLNISYNSFSGYLPDNKLFRQLSPQDLEGNK 692


>gi|194753275|ref|XP_001958942.1| GF12306 [Drosophila ananassae]
 gi|190620240|gb|EDV35764.1| GF12306 [Drosophila ananassae]
          Length = 860

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 190/377 (50%), Gaps = 26/377 (6%)

Query: 184 ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVT 243
           + P V     +L+ LYL   R++T+ P + Y   L +L +  N +  +P  +G L+ L  
Sbjct: 32  DFPEVWQHERTLEELYLSTTRLQTLPPQLFYCQGLRVLHVNSNNLESIPQAIGSLRQLQH 91

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           LDL  N +  +P EI +C  L  LDL  N L  +PD + +LI+L  L L+   LE +P  
Sbjct: 92  LDLNRNLIVTVPDEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPAN 151

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
             + V+L    +    L +LP  ++  L ++  + +  N+FT  P     +  S+  +  
Sbjct: 152 FGRLVNLRILELRLNNLITLPKSMVR-LVNLQRLDIGGNEFTELPEVV-GELKSLKELWI 209

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW-------------------VG 404
           + NQI ++   I  + + L       NLL +LP +L  W                   VG
Sbjct: 210 DFNQIRRVSANI-GKLRELQHFEANGNLLDTLPNELSNWRNVEVLSICSNNLEAFPFSVG 268

Query: 405 ----LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L      +N +++L + I  L  LE LVLS+N L +LPS+IG LR L+ L  ++N+
Sbjct: 269 MLKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQ 328

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
           L  LP+E+   ++L  L + SNQL +LP+ IG+L  L  L+V  N + ++P  +  L NL
Sbjct: 329 LRQLPDELCSCQQLSVLSVASNQLSALPQNIGNLAKLRVLNVVNNYINALPVSMLNLVNL 388

Query: 521 HTLYLNDNTCLNNIPFE 537
            +L+L+DN     +P +
Sbjct: 389 TSLWLSDNQSQPLVPLQ 405



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 193/386 (50%), Gaps = 6/386 (1%)

Query: 100 EENILNLDLSKSSI-THLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           EE I  LD S + + T  P   +    LEELYL   +L +LP Q+ Y   L  L +  N+
Sbjct: 16  EEVIDKLDYSNTPLSTDFPEVWQHERTLEELYLSTTRLQTLPPQLFYCQGLRVLHVNSNN 75

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L S+P ++ +L+QL+ LDL  N +  +P  +     L  L L  N ++ +   I  L +L
Sbjct: 76  LESIPQAIGSLRQLQHLDLNRNLIVTVPDEIKSCKHLTHLDLSCNSLQRLPDAITSLISL 135

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L + +  +  LP   G L NL  L+L  N+L  LPK +     L  LD+  NE   +P
Sbjct: 136 QELLLNETYLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTELP 195

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           +++G L +L  L + +N++  V   + K   L  F   G  L +LP+  LS+  ++  ++
Sbjct: 196 EVVGELKSLKELWIDFNQIRRVSANIGKLRELQHFEANGNLLDTLPNE-LSNWRNVEVLS 254

Query: 339 LSRNKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
           +  N   A+P S G     S+ +   E N + ++P  I S  + L ++ +  N L  LP 
Sbjct: 255 ICSNNLEAFPFSVG--MLKSLVTFKCESNGLTELPDSI-SYLEQLEELVLSHNKLIRLPS 311

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
            +G    L  L    NQ+ +L +++ +   L VL +++N L  LP +IGNL KL+ L++ 
Sbjct: 312 TIGMLRSLRFLFADDNQLRQLPDELCSCQQLSVLSVASNQLSALPQNIGNLAKLRVLNVV 371

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQ 483
            N + +LP  +  L  L  L L  NQ
Sbjct: 372 NNYINALPVSMLNLVNLTSLWLSDNQ 397



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 156/326 (47%), Gaps = 28/326 (8%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           + +  E   CK  ++ +LDLS +S+  LP ++  L  L+EL L    L  LP+  G + N
Sbjct: 100 VTVPDEIKSCK--HLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPANFGRLVN 157

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L L  N+L +LP S+  L  L+ LD+  N+  ELP VV +L SLK L++ FN+I+ V
Sbjct: 158 LRILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVGELKSLKELWIDFNQIRRV 217

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
             +I  L  L       N +  LP EL   +N+  L +  N+LE  P  +G    LVT  
Sbjct: 218 SANIGKLRELQHFEANGNLLDTLPNELSNWRNVEVLSICSNNLEAFPFSVGMLKSLVTFK 277

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
            + N L  +PD +  L  L  L LS+N+L  +P T+     L     +   L  LPD L 
Sbjct: 278 CESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPDELC 337

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           S                        Q  SV S+    NQ+  +P  I + AK L  +N+ 
Sbjct: 338 S-----------------------CQQLSVLSV--ASNQLSALPQNIGNLAK-LRVLNVV 371

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQ 414
           +N + +LP+ +   V LT L L  NQ
Sbjct: 372 NNYINALPVSMLNLVNLTSLWLSDNQ 397



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 72/133 (54%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           ++++      + +T LP S+  L  LEEL L  NKL  LPS IG + +L  L   +N L 
Sbjct: 271 KSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLR 330

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LPD L + QQL VL +  N+L+ LP  +  L  L++L +  N I  +   +  L NL+ 
Sbjct: 331 QLPDELCSCQQLSVLSVASNQLSALPQNIGNLAKLRVLNVVNNYINALPVSMLNLVNLTS 390

Query: 221 LSMRDNKIRELPP 233
           L + DN+ + L P
Sbjct: 391 LWLSDNQSQPLVP 403



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 74/153 (48%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L +  +++   P SV  L  L       N L  LP  I Y+  L  L L+ N L  
Sbjct: 249 NVEVLSICSNNLEAFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIR 308

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP ++  L+ LR L    N+L +LP  +     L +L +  N++  +  +I  L+ L +L
Sbjct: 309 LPSTIGMLRSLRFLFADDNQLRQLPDELCSCQQLSVLSVASNQLSALPQNIGNLAKLRVL 368

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           ++ +N I  LP  +  L NL +L L+ N  + L
Sbjct: 369 NVVNNYINALPVSMLNLVNLTSLWLSDNQSQPL 401


>gi|313220970|emb|CBY31803.1| unnamed protein product [Oikopleura dioica]
          Length = 1092

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 196/412 (47%), Gaps = 50/412 (12%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           LEEL L  N +  LP Q   + NL  L L++N L++L   ++ L +L  LDL  N L  +
Sbjct: 42  LEELLLGSNNIKELPKQFFKLVNLKKLNLSDNDLSNLGQEISQLSKLVELDLSRNDLGRI 101

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  +  L  L+ +    N +  +   +  L++L  L +    +   P   G+LK L TL+
Sbjct: 102 PENIKMLALLESVDFSANPMTRIPETMVNLASLKHLKINAISLERFPENFGDLKTLETLE 161

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
              N +  LP+ I     L  LDL  NE+  +P+  G L NL  L +  N L S+PE++ 
Sbjct: 162 ARENMVMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSLPESIG 221

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
             V                           N+TL+                     +F  
Sbjct: 222 GLV---------------------------NLTLA---------------------DFTK 233

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           N++++IP  I S   N+S + +K+N L+ LP  +G+   L+EL +  N++ +L+E I   
Sbjct: 234 NKLEQIPDSI-SNCVNISVLTLKENYLSYLPHSIGSLKKLSELTVDNNKLCELTESIGQC 292

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
           V L  L+L+ NL++ LP S+  L +L  L+L  N++  LP +IG  K L+ L L+ N L 
Sbjct: 293 VALTELILTENLIQVLPESVACLCRLGVLNLGRNRITHLPEKIGKCKALRMLFLRENHLE 352

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            +P  IG L NL  L V  N L  +P+ +  L ++  ++L+ N     + F+
Sbjct: 353 RIPETIGDLKNLQTLDVAGNRLDYLPDSLLQL-DIKAVWLSANQAQPLVAFQ 403



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 182/385 (47%), Gaps = 28/385 (7%)

Query: 179 HNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           H  L  +P  VY+ + SL+ L L  N IK +      L NL  L++ DN +  L  E+ +
Sbjct: 25  HAFLASVPEEVYRHSRSLEELLLGSNNIKELPKQFFKLVNLKKLNLSDNDLSNLGQEISQ 84

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L  LV LDL+ N L  +P+ I    +L ++D   N +  IP+ + NL +L  L+++   L
Sbjct: 85  LSKLVELDLSRNDLGRIPENIKMLALLESVDFSANPMTRIPETMVNLASLKHLKINAISL 144

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
           E  PE       L         + +LP+  +  L ++  + L  N+ T  P         
Sbjct: 145 ERFPENFGDLKTLETLEARENMVMTLPE-TICELPNLQYLDLGENEITKLPEK------- 196

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
                             F +  NL ++ M DN LTSLP  +G  V LT  +   N++ +
Sbjct: 197 ------------------FGKLSNLLELWMDDNDLTSLPESIGGLVNLTLADFTKNKLEQ 238

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + + I N VN+ VL L  N L  LP SIG+L+KL  L ++ NKL  L   IG    L  L
Sbjct: 239 IPDSISNCVNISVLTLKENYLSYLPHSIGSLKKLSELTVDNNKLCELTESIGQCVALTEL 298

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           IL  N +  LP ++  L  L  L++G N +  +PE+IG  + L  L+L +N  L  IP  
Sbjct: 299 ILTENLIQVLPESVACLCRLGVLNLGRNRITHLPEKIGKCKALRMLFLRENH-LERIPET 357

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIV 562
           +    NLQ + +    L  +P  ++
Sbjct: 358 IGDLKNLQTLDVAGNRLDYLPDSLL 382



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 192/380 (50%), Gaps = 27/380 (7%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  ++I  LP    KL +L++L L  N L++L  +I  ++ L  L L+ N L  +P+++ 
Sbjct: 47  LGSNNIKELPKQFFKLVNLKKLNLSDNDLSNLGQEISQLSKLVELDLSRNDLGRIPENIK 106

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
            L  L  +D   N +  +P  +  L SLK L +    ++    +   L  L  L  R+N 
Sbjct: 107 MLALLESVDFSANPMTRIPETMVNLASLKHLKINAISLERFPENFGDLKTLETLEARENM 166

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           +  LP  + EL NL  LDL  N + +LP++ G  + L+ L +  N+L ++P+ +G L+NL
Sbjct: 167 VMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSLPESIGGLVNL 226

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
           T    + N+LE +P+++S CV+++   ++   LS LP   + SL  ++ +T+  NK    
Sbjct: 227 TLADFTKNKLEQIPDSISNCVNISVLTLKENYLSYLPHS-IGSLKKLSELTVDNNKLCEL 285

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
                                         +   L+++ + +NL+  LP  +     L  
Sbjct: 286 TES-------------------------IGQCVALTELILTENLIQVLPESVACLCRLGV 320

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           LNLG N+I+ L E I     L +L L  N L+++P +IG+L+ L+ LD+  N+L+ LP+ 
Sbjct: 321 LNLGRNRITHLPEKIGKCKALRMLFLRENHLERIPETIGDLKNLQTLDVAGNRLDYLPDS 380

Query: 468 IGFLKELQRLILQSNQLVSL 487
           +  L +++ + L +NQ   L
Sbjct: 381 LLQL-DIKAVWLSANQAQPL 399



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 115/207 (55%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C+  N+  LDL ++ IT LP    KL++L EL++  N L SLP  IG + NLT     +N
Sbjct: 175 CELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSLPESIGGLVNLTLADFTKN 234

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L  +PDS++N   + VL L+ N L+ LP  +  L  L  L +  N++  +   I     
Sbjct: 235 KLEQIPDSISNCVNISVLTLKENYLSYLPHSIGSLKKLSELTVDNNKLCELTESIGQCVA 294

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L+ L + +N I+ LP  +  L  L  L+L  N +  LP++IG C  L  L L+ N L  I
Sbjct: 295 LTELILTENLIQVLPESVACLCRLGVLNLGRNRITHLPEKIGKCKALRMLFLRENHLERI 354

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETL 304
           P+ +G+L NL  L ++ NRL+ +P++L
Sbjct: 355 PETIGDLKNLQTLDVAGNRLDYLPDSL 381



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 146/294 (49%), Gaps = 3/294 (1%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LDLS++ +  +P +++ L  LE +    N +  +P  +  + +L  L +   SL   
Sbjct: 88  LVELDLSRNDLGRIPENIKMLALLESVDFSANPMTRIPETMVNLASLKHLKINAISLERF 147

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P++  +L+ L  L+ R N +  LP  + +L +L+ L L  N I  +      LSNL  L 
Sbjct: 148 PENFGDLKTLETLEARENMVMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELW 207

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           M DN +  LP  +G L NL   D   N LE++P  I NC  +  L L+ N L  +P  +G
Sbjct: 208 MDDNDLTSLPESIGGLVNLTLADFTKNKLEQIPDSISNCVNISVLTLKENYLSYLPHSIG 267

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
           +L  L+ L +  N+L  + E++ +CV L E  +    +  LP+  ++ L  +  + L RN
Sbjct: 268 SLKKLSELTVDNNKLCELTESIGQCVALTELILTENLIQVLPES-VACLCRLGVLNLGRN 326

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + T  P     +  ++  +    N +++IP  I    KNL  +++  N L  LP
Sbjct: 327 RITHLPEKI-GKCKALRMLFLRENHLERIPETI-GDLKNLQTLDVAGNRLDYLP 378



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 125/238 (52%), Gaps = 2/238 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+  ++ +  LP ++ +L +L+ L L  N++  LP + G ++NL  L + +N LTSLP+S
Sbjct: 160 LEARENMVMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSLPES 219

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L + D   NKL ++P  +    ++ +L L+ N +  +   I  L  LS L++ +
Sbjct: 220 IGGLVNLTLADFTKNKLEQIPDSISNCVNISVLTLKENYLSYLPHSIGSLKKLSELTVDN 279

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+ EL   +G+   L  L L  N ++ LP+ +     L  L+L  N + ++P+ +G   
Sbjct: 280 NKLCELTESIGQCVALTELILTENLIQVLPESVACLCRLGVLNLGRNRITHLPEKIGKCK 339

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
            L  L L  N LE +PET+    +L   +V G  L  LPD LL     I  + LS N+
Sbjct: 340 ALRMLFLRENHLERIPETIGDLKNLQTLDVAGNRLDYLPDSLLQ--LDIKAVWLSANQ 395



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 108/242 (44%), Gaps = 24/242 (9%)

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
           K  A   GG      V S    H  +  +P  ++  +++L ++ +  N +  LP      
Sbjct: 3   KLFACFGGGFKCNRKVESFEKTHAFLASVPEEVYRHSRSLEELLLGSNNIKELPKQFFKL 62

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN--- 459
           V L +LNL  N +S L ++I  L  L  L LS N L ++P +I  L  L+ +D   N   
Sbjct: 63  VNLKKLNLSDNDLSNLGQEISQLSKLVELDLSRNDLGRIPENIKMLALLESVDFSANPMT 122

Query: 460 --------------------KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
                                LE  P   G LK L+ L  + N +++LP  I  L NL Y
Sbjct: 123 RIPETMVNLASLKHLKINAISLERFPENFGDLKTLETLEARENMVMTLPETICELPNLQY 182

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPS 559
           L +GEN +  +PE+ G L NL  L+++DN  L ++P  +    NL +       L QIP 
Sbjct: 183 LDLGENEITKLPEKFGKLSNLLELWMDDND-LTSLPESIGGLVNLTLADFTKNKLEQIPD 241

Query: 560 EI 561
            I
Sbjct: 242 SI 243


>gi|168043924|ref|XP_001774433.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674285|gb|EDQ60796.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 513

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 163/449 (36%), Positives = 252/449 (56%), Gaps = 42/449 (9%)

Query: 111 SSITHLPPSVEKLTHLEELYLYG-NKLASLPSQIGYVTNLTCLGL-AENSLTSLPDSLAN 168
           S++T LP  ++ LT L  L L G + L SLP+++  +T+LT L +   +SLTSLP+ L N
Sbjct: 75  SNLTSLPNELDNLTSLISLDLSGCSNLTSLPNELDNLTSLTSLNINGCSSLTSLPNELGN 134

Query: 169 LQQLRVLDLRH-NKLNELPMVVYKLTSLKILYLR-FNRIKTVHPDIQYLSNLSMLSMRDN 226
           L  L  L++   + L  LP  +  LTSL  L L   + + ++  ++  L++L+ L++   
Sbjct: 135 LTSLTSLNINECSSLTSLPNELGNLTSLISLDLSGCSNLTSLLNELHNLASLTSLNLSGC 194

Query: 227 -KIRELPPELGELKNLVTLDLAH-NHLEELPKEIGNCTMLVTLDLQH-NELVNIPDMLGN 283
             +  LP ELG L +L++LDL+  ++L  LP E+ N T L +L++   + L ++P+ LGN
Sbjct: 195 PSLTSLPNELGNLTSLISLDLSGCSNLTSLPNELDNFTSLTSLNINGCSSLTSLPNELGN 254

Query: 284 LINLTRLRLSY-NRLESVPETLSKCVHLNEFNVEGCA-LSSLPD--GLLSSLTSINNITL 339
           L +LT + LS+ + L S+P  L     L  FN+  C  L SLP+  G L+SLTS N   L
Sbjct: 255 LTSLTSINLSWCSNLTSLPNELGNLASLTSFNISECWKLISLPNELGKLTSLTSFN---L 311

Query: 340 SR-NKFTAYPS--GGPTQFTSVYSINFEH--------NQIDKIPYGIFSRAKNLSKVNMK 388
           S  +  T+ P+  G      S+ S+N           N++ K+   I       S     
Sbjct: 312 SWCSSLTSLPNELG---HLVSLTSLNLSECSNLTSLPNELGKLTSLILLDLSGCSN---- 364

Query: 389 DNLLTSLPLDLGTWVGLTELNL-GTNQISKLSEDIQNLVNLEVLVLSNNL-LKKLPSSIG 446
              LTSLP +LG    LT LN+ G++ ++ L  ++ NL +L  L +S  + L  LP+ +G
Sbjct: 365 ---LTSLPNELGNLTSLTSLNINGSSNLTSLPNELGNLTSLTSLHISECMRLTSLPNELG 421

Query: 447 NLRKLKCLDLEE-NKLESLPNEIGFLKELQRLIL-QSNQLVSLPRAIGHLTNLSYLSV-G 503
           NL+ L  L L E + L SLPNE+G LK L  LIL + + L SLP  +G+LT+L+ L++ G
Sbjct: 422 NLKSLTSLILSECSSLTSLPNELGNLKSLTSLILSECSSLTSLPNELGNLTSLTSLNLSG 481

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
             +L S+P E+G L +L +L L  + CLN
Sbjct: 482 CRHLTSLPNELGNLTSLTSLDL--SWCLN 508



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 172/480 (35%), Positives = 276/480 (57%), Gaps = 26/480 (5%)

Query: 103 ILNLDLSK-SSITHLPPSVEKLTHLEELYLYG-NKLASLPSQIGYVTNLTCLGLAENS-L 159
           I +L+LS  SS+T LP  +  LT L  L + G + L SLP+++  + +LT L L+  S L
Sbjct: 18  ITSLNLSGCSSLTSLPNELGNLTSLISLDISGCSNLISLPNELHNLASLTSLNLSGCSNL 77

Query: 160 TSLPDSLANLQQLRVLDLRH-NKLNELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSN 217
           TSLP+ L NL  L  LDL   + L  LP  +  LTSL  L +      T  P ++  L++
Sbjct: 78  TSLPNELDNLTSLISLDLSGCSNLTSLPNELDNLTSLTSLNINGCSSLTSLPNELGNLTS 137

Query: 218 LSMLSMRD-NKIRELPPELGELKNLVTLDLAH-NHLEELPKEIGNCTMLVTLDLQHN-EL 274
           L+ L++ + + +  LP ELG L +L++LDL+  ++L  L  E+ N   L +L+L     L
Sbjct: 138 LTSLNINECSSLTSLPNELGNLTSLISLDLSGCSNLTSLLNELHNLASLTSLNLSGCPSL 197

Query: 275 VNIPDMLGNLINLTRLRLS-YNRLESVPETLSKCVHLNEFNVEGCA-LSSLPD--GLLSS 330
            ++P+ LGNL +L  L LS  + L S+P  L     L   N+ GC+ L+SLP+  G L+S
Sbjct: 198 TSLPNELGNLTSLISLDLSGCSNLTSLPNELDNFTSLTSLNINGCSSLTSLPNELGNLTS 257

Query: 331 LTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           LTSIN ++   N  T+ P+  G     TS ++I+ E  ++  +P  +  +  +L+  N+ 
Sbjct: 258 LTSIN-LSWCSN-LTSLPNELGNLASLTS-FNIS-ECWKLISLPNEL-GKLTSLTSFNLS 312

Query: 389 -DNLLTSLPLDLGTWVGLTELNLG-TNQISKLSEDIQNLVNLEVLVLSN-NLLKKLPSSI 445
             + LTSLP +LG  V LT LNL   + ++ L  ++  L +L +L LS  + L  LP+ +
Sbjct: 313 WCSSLTSLPNELGHLVSLTSLNLSECSNLTSLPNELGKLTSLILLDLSGCSNLTSLPNEL 372

Query: 446 GNLRKLKCLDLE-ENKLESLPNEIGFLKELQRL-ILQSNQLVSLPRAIGHLTNLSYLSVG 503
           GNL  L  L++   + L SLPNE+G L  L  L I +  +L SLP  +G+L +L+ L + 
Sbjct: 373 GNLTSLTSLNINGSSNLTSLPNELGNLTSLTSLHISECMRLTSLPNELGNLKSLTSLILS 432

Query: 504 E-NNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC-PLSQIPSEI 561
           E ++L S+P E+G L++L +L L++ + L ++P EL   ++L  ++L  C  L+ +P+E+
Sbjct: 433 ECSSLTSLPNELGNLKSLTSLILSECSSLTSLPNELGNLTSLTSLNLSGCRHLTSLPNEL 492



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 159/470 (33%), Positives = 250/470 (53%), Gaps = 47/470 (10%)

Query: 111 SSITHLPPSVEKLTHLEELYLYG-NKLASLPSQIGYVTNLTCLGLAENS-LTSLPDSLAN 168
           S +T LP  +  LT +  L L G + L SLP+++G +T+L  L ++  S L SLP+ L N
Sbjct: 3   SKLTSLPKELVNLTFITSLNLSGCSSLTSLPNELGNLTSLISLDISGCSNLISLPNELHN 62

Query: 169 LQQLRVLDLRH-NKLNELPMVVYKLTSLKILYLR-FNRIKTVHPDIQYLSNLSMLSMRD- 225
           L  L  L+L   + L  LP  +  LTSL  L L   + + ++  ++  L++L+ L++   
Sbjct: 63  LASLTSLNLSGCSNLTSLPNELDNLTSLISLDLSGCSNLTSLPNELDNLTSLTSLNINGC 122

Query: 226 NKIRELPPELGELKNLVTLDLAH-NHLEELPKEIGNCTMLVTLDLQH-NELVNIPDMLGN 283
           + +  LP ELG L +L +L++   + L  LP E+GN T L++LDL   + L ++ + L N
Sbjct: 123 SSLTSLPNELGNLTSLTSLNINECSSLTSLPNELGNLTSLISLDLSGCSNLTSLLNELHN 182

Query: 284 LINLTRLRLSYN-RLESVPETLSKCVHLNEFNVEGCA-LSSLPDGL--LSSLTSINNITL 339
           L +LT L LS    L S+P  L     L   ++ GC+ L+SLP+ L   +SLTS+N    
Sbjct: 183 LASLTSLNLSGCPSLTSLPNELGNLTSLISLDLSGCSNLTSLPNELDNFTSLTSLNINGC 242

Query: 340 SRNKFTAYPS--GGPTQFTSVYSINFEH-NQIDKIPYGIFSRAKNLSKVNMKDNL-LTSL 395
           S    T+ P+  G     TS+ SIN    + +  +P  + + A  L+  N+ +   L SL
Sbjct: 243 S--SLTSLPNELG---NLTSLTSINLSWCSNLTSLPNELGNLAS-LTSFNISECWKLISL 296

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P +LG    LT  NL     S  S                  L  LP+ +G+L  L  L+
Sbjct: 297 PNELGKLTSLTSFNL-----SWCSS-----------------LTSLPNELGHLVSLTSLN 334

Query: 456 LEE-NKLESLPNEIGFLKELQRLILQS-NQLVSLPRAIGHLTNLSYLSV-GENNLQSIPE 512
           L E + L SLPNE+G L  L  L L   + L SLP  +G+LT+L+ L++ G +NL S+P 
Sbjct: 335 LSECSNLTSLPNELGKLTSLILLDLSGCSNLTSLPNELGNLTSLTSLNINGSSNLTSLPN 394

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC-PLSQIPSEI 561
           E+G L +L +L++++   L ++P EL    +L  + L  C  L+ +P+E+
Sbjct: 395 ELGNLTSLTSLHISECMRLTSLPNELGNLKSLTSLILSECSSLTSLPNEL 444


>gi|313227075|emb|CBY22222.1| unnamed protein product [Oikopleura dioica]
          Length = 1092

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 196/412 (47%), Gaps = 50/412 (12%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           LEEL L  N +  LP Q   + NL  L L++N L++L   ++ L +L  LDL  N L  +
Sbjct: 42  LEELLLGSNNIKELPKQFFKLVNLKKLNLSDNDLSNLGQEISQLSKLVELDLSRNDLGRI 101

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  +  L  L+ +    N +  +   +  L++L  L +    +   P   G+LK L TL+
Sbjct: 102 PENIKMLALLESVDFSANPMTRIPETMVNLASLKHLKINAISLERFPENFGDLKTLETLE 161

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
              N +  LP+ I     L  LDL  NE+  +P+  G L NL  L +  N L S+PE++ 
Sbjct: 162 ARENMVMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSLPESIG 221

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
             V                           N+TL+                     +F  
Sbjct: 222 GLV---------------------------NLTLA---------------------DFTK 233

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           N++++IP  I S   N+S + +K+N L+ LP  +G+   L+EL +  N++ +L+E I   
Sbjct: 234 NKLEQIPDSI-SNCVNISVLTLKENYLSYLPHSIGSLKKLSELTVDNNKLCELTESIGQC 292

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
           V L  L+L+ NL++ LP S+  L +L  L+L  N++  LP +IG  K L+ L L+ N L 
Sbjct: 293 VALTELILTENLIQVLPESVACLCRLGVLNLGRNRITHLPEKIGKCKALRMLFLRENHLE 352

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            +P  IG L NL  L V  N L  +P+ +  L ++  ++L+ N     + F+
Sbjct: 353 RIPETIGDLKNLQTLDVAGNRLDYLPDSLLQL-DIKAVWLSANQAQPLVAFQ 403



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 182/385 (47%), Gaps = 28/385 (7%)

Query: 179 HNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           H  L  +P  VY+ + SL+ L L  N IK +      L NL  L++ DN +  L  E+ +
Sbjct: 25  HAFLASVPEEVYRHSRSLEELLLGSNNIKELPKQFFKLVNLKKLNLSDNDLSNLGQEISQ 84

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L  LV LDL+ N L  +P+ I    +L ++D   N +  IP+ + NL +L  L+++   L
Sbjct: 85  LSKLVELDLSRNDLGRIPENIKMLALLESVDFSANPMTRIPETMVNLASLKHLKINAISL 144

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
           E  PE       L         + +LP+  +  L ++  + L  N+ T  P         
Sbjct: 145 ERFPENFGDLKTLETLEARENMVMTLPE-TICELPNLQYLDLGENEITKLPEK------- 196

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
                             F +  NL ++ M DN LTSLP  +G  V LT  +   N++ +
Sbjct: 197 ------------------FGKLSNLLELWMDDNDLTSLPESIGGLVNLTLADFTKNKLEQ 238

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           + + I N VN+ VL L  N L  LP SIG+L+KL  L ++ NKL  L   IG    L  L
Sbjct: 239 IPDSISNCVNISVLTLKENYLSYLPHSIGSLKKLSELTVDNNKLCELTESIGQCVALTEL 298

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           IL  N +  LP ++  L  L  L++G N +  +PE+IG  + L  L+L +N  L  IP  
Sbjct: 299 ILTENLIQVLPESVACLCRLGVLNLGRNRITHLPEKIGKCKALRMLFLRENH-LERIPET 357

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIV 562
           +    NLQ + +    L  +P  ++
Sbjct: 358 IGDLKNLQTLDVAGNRLDYLPDSLL 382



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 192/380 (50%), Gaps = 27/380 (7%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  ++I  LP    KL +L++L L  N L++L  +I  ++ L  L L+ N L  +P+++ 
Sbjct: 47  LGSNNIKELPKQFFKLVNLKKLNLSDNDLSNLGQEISQLSKLVELDLSRNDLGRIPENIK 106

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
            L  L  +D   N +  +P  +  L SLK L +    ++    +   L  L  L  R+N 
Sbjct: 107 MLALLESVDFSANPMTRIPETMVNLASLKHLKINAISLERFPENFGDLKTLETLEARENM 166

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           +  LP  + EL NL  LDL  N + +LP++ G  + L+ L +  N+L ++P+ +G L+NL
Sbjct: 167 VMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSLPESIGGLVNL 226

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
           T    + N+LE +P+++S CV+++   ++   LS LP   + SL  ++ +T+  NK    
Sbjct: 227 TLADFTKNKLEQIPDSISNCVNISVLTLKENYLSYLPHS-IGSLKKLSELTVDNNKLCEL 285

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
                                         +   L+++ + +NL+  LP  +     L  
Sbjct: 286 TES-------------------------IGQCVALTELILTENLIQVLPESVACLCRLGV 320

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           LNLG N+I+ L E I     L +L L  N L+++P +IG+L+ L+ LD+  N+L+ LP+ 
Sbjct: 321 LNLGRNRITHLPEKIGKCKALRMLFLRENHLERIPETIGDLKNLQTLDVAGNRLDYLPDS 380

Query: 468 IGFLKELQRLILQSNQLVSL 487
           +  L +++ + L +NQ   L
Sbjct: 381 LLQL-DIKAVWLSANQAQPL 399



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 115/207 (55%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C+  N+  LDL ++ IT LP    KL++L EL++  N L SLP  IG + NLT     +N
Sbjct: 175 CELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSLPESIGGLVNLTLADFTKN 234

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L  +PDS++N   + VL L+ N L+ LP  +  L  L  L +  N++  +   I     
Sbjct: 235 KLEQIPDSISNCVNISVLTLKENYLSYLPHSIGSLKKLSELTVDNNKLCELTESIGQCVA 294

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L+ L + +N I+ LP  +  L  L  L+L  N +  LP++IG C  L  L L+ N L  I
Sbjct: 295 LTELILTENLIQVLPESVACLCRLGVLNLGRNRITHLPEKIGKCKALRMLFLRENHLERI 354

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETL 304
           P+ +G+L NL  L ++ NRL+ +P++L
Sbjct: 355 PETIGDLKNLQTLDVAGNRLDYLPDSL 381



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 146/294 (49%), Gaps = 3/294 (1%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LDLS++ +  +P +++ L  LE +    N +  +P  +  + +L  L +   SL   
Sbjct: 88  LVELDLSRNDLGRIPENIKMLALLESVDFSANPMTRIPETMVNLASLKHLKINAISLERF 147

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P++  +L+ L  L+ R N +  LP  + +L +L+ L L  N I  +      LSNL  L 
Sbjct: 148 PENFGDLKTLETLEARENMVMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELW 207

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           M DN +  LP  +G L NL   D   N LE++P  I NC  +  L L+ N L  +P  +G
Sbjct: 208 MDDNDLTSLPESIGGLVNLTLADFTKNKLEQIPDSISNCVNISVLTLKENYLSYLPHSIG 267

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
           +L  L+ L +  N+L  + E++ +CV L E  +    +  LP+  ++ L  +  + L RN
Sbjct: 268 SLKKLSELTVDNNKLCELTESIGQCVALTELILTENLIQVLPES-VACLCRLGVLNLGRN 326

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + T  P     +  ++  +    N +++IP  I    KNL  +++  N L  LP
Sbjct: 327 RITHLPEKI-GKCKALRMLFLRENHLERIPETI-GDLKNLQTLDVAGNRLDYLP 378



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 125/238 (52%), Gaps = 2/238 (0%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+  ++ +  LP ++ +L +L+ L L  N++  LP + G ++NL  L + +N LTSLP+S
Sbjct: 160 LEARENMVMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSLPES 219

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L  L + D   NKL ++P  +    ++ +L L+ N +  +   I  L  LS L++ +
Sbjct: 220 IGGLVNLTLADFTKNKLEQIPDSISNCVNISVLTLKENYLSYLPHSIGSLKKLSELTVDN 279

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           NK+ EL   +G+   L  L L  N ++ LP+ +     L  L+L  N + ++P+ +G   
Sbjct: 280 NKLCELTESIGQCVALTELILTENLIQVLPESVACLCRLGVLNLGRNRITHLPEKIGKCK 339

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
            L  L L  N LE +PET+    +L   +V G  L  LPD LL     I  + LS N+
Sbjct: 340 ALRMLFLRENHLERIPETIGDLKNLQTLDVAGNRLDYLPDSLLQ--LDIKAVWLSANQ 395



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 108/242 (44%), Gaps = 24/242 (9%)

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
           K  A   GG      V S    H  +  +P  ++  +++L ++ +  N +  LP      
Sbjct: 3   KLFACFGGGFKCNRKVESFEKTHAFLASVPEEVYRHSRSLEELLLGSNNIKELPKQFFKL 62

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN--- 459
           V L +LNL  N +S L ++I  L  L  L LS N L ++P +I  L  L+ +D   N   
Sbjct: 63  VNLKKLNLSDNDLSNLGQEISQLSKLVELDLSRNDLGRIPENIKMLALLESVDFSANPMT 122

Query: 460 --------------------KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
                                LE  P   G LK L+ L  + N +++LP  I  L NL Y
Sbjct: 123 RIPETMVNLASLKHLKINAISLERFPENFGDLKTLETLEARENMVMTLPETICELPNLQY 182

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPS 559
           L +GEN +  +PE+ G L NL  L+++DN  L ++P  +    NL +       L QIP 
Sbjct: 183 LDLGENEITKLPEKFGKLSNLLELWMDDND-LTSLPESIGGLVNLTLADFTKNKLEQIPD 241

Query: 560 EI 561
            I
Sbjct: 242 SI 243


>gi|291224493|ref|XP_002732238.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 461

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 182/337 (54%), Gaps = 3/337 (0%)

Query: 130 YLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVV 189
           Y   N L  +P +IG    L  L L+ N +  +PDSL  L+QL  L + +N L  +P  +
Sbjct: 128 YTQNNGLTIVPRKIGECHELQKLKLSSNKIAKIPDSLCALEQLTELYMGYNALTAIPDEI 187

Query: 190 YKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHN 249
            KL ++ IL L FN+I  +   +  L  L+ L M  N +  +P E+G+LK++  L L +N
Sbjct: 188 GKLKNMNILNLTFNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNN 247

Query: 250 HLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVH 309
           ++E++P  +     L  L++++N L  IPD +  L ++  L LS N +  +P++L     
Sbjct: 248 NIEKIPDSLCALEQLTELNVRYNALTAIPDEITKLKSMKILDLSSNNIAKIPDSLCALEQ 307

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
           L E  +   AL+++PD  ++ L S+  + LS +KF   P    T    +  +N  +N + 
Sbjct: 308 LTELYMGSDALTAIPDE-ITKLKSMKILDLSFSKFAKIPDSLCT-LEQLTKLNMHYNALT 365

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
            IP  I ++ K+L  +N+  N +  +P  L     LTELN+ +N ++ + ++I  L +++
Sbjct: 366 AIPDEI-TKLKSLKILNLNHNNIAKIPDSLCALEQLTELNMVSNALTAIPDEISKLKSMK 424

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
            L LS N + K+P S+  L +L  LD+  N L S+P+
Sbjct: 425 TLNLSFNKIAKIPDSLCALEQLTELDMMSNALTSIPS 461



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 175/338 (51%), Gaps = 26/338 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + I  +P S+  L  L ELY+  N L ++P +IG + N+  L L  N +  +PDS
Sbjct: 150 LKLSSNKIAKIPDSLCALEQLTELYMGYNALTAIPDEIGKLKNMNILNLTFNKIAKIPDS 209

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L  L+QL  L + +N L  +P  + KL S+KIL L  N I+ +   +  L  L+ L++R 
Sbjct: 210 LCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNNIEKIPDSLCALEQLTELNVRY 269

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N +  +P E+ +LK++  LDL+ N++ ++P  +     L  L +  + L  IPD +  L 
Sbjct: 270 NALTAIPDEITKLKSMKILDLSSNNIAKIPDSLCALEQLTELYMGSDALTAIPDEITKLK 329

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           ++  L LS+++   +P++L     L + N+   AL+++PD +                  
Sbjct: 330 SMKILDLSFSKFAKIPDSLCTLEQLTKLNMHYNALTAIPDEI------------------ 371

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                  T+  S+  +N  HN I KIP  + +  + L+++NM  N LT++P ++     +
Sbjct: 372 -------TKLKSLKILNLNHNNIAKIPDSLCA-LEQLTELNMVSNALTAIPDEISKLKSM 423

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
             LNL  N+I+K+ + +  L  L  L + +N L  +PS
Sbjct: 424 KTLNLSFNKIAKIPDSLCALEQLTELDMMSNALTSIPS 461



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 159/306 (51%), Gaps = 28/306 (9%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           I  E  + K  NILNL  +K  I  +P S+  L  L ELY+  N L ++P +IG + ++ 
Sbjct: 183 IPDEIGKLKNMNILNLTFNK--IAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMK 240

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L  N++  +PDSL  L+QL  L++R+N L  +P  + KL S+KIL L  N I  +  
Sbjct: 241 ILKLNNNNIEKIPDSLCALEQLTELNVRYNALTAIPDEITKLKSMKILDLSSNNIAKIPD 300

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
            +  L  L+ L M  + +  +P E+ +LK++  LDL+ +   ++P  +     L  L++ 
Sbjct: 301 SLCALEQLTELYMGSDALTAIPDEITKLKSMKILDLSFSKFAKIPDSLCTLEQLTKLNMH 360

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           +N L  IPD +  L +L  L L++N +  +P++L     L E N+   AL+++PD +   
Sbjct: 361 YNALTAIPDEITKLKSLKILNLNHNNIAKIPDSLCALEQLTELNMVSNALTAIPDEI--- 417

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
                                 ++  S+ ++N   N+I KIP  + +  + L++++M  N
Sbjct: 418 ----------------------SKLKSMKTLNLSFNKIAKIPDSLCA-LEQLTELDMMSN 454

Query: 391 LLTSLP 396
            LTS+P
Sbjct: 455 ALTSIP 460



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 197/373 (52%), Gaps = 11/373 (2%)

Query: 191 KLTSLKILYLRFNRIKTVHPDI--QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           KL + + L  +   IKT  P      +++ S  + ++N +  +P ++GE   L  L L+ 
Sbjct: 96  KLFTERFLQSKTADIKTAQPQFNDDEVASTSTYT-QNNGLTIVPRKIGECHELQKLKLSS 154

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N + ++P  +     L  L + +N L  IPD +G L N+  L L++N++  +P++L    
Sbjct: 155 NKIAKIPDSLCALEQLTELYMGYNALTAIPDEIGKLKNMNILNLTFNKIAKIPDSLCALE 214

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
            L E  +E  AL+++PD +   L S+  + L+ N     P         +  +N  +N +
Sbjct: 215 QLTELYMEYNALTAIPDEI-GKLKSMKILKLNNNNIEKIP-DSLCALEQLTELNVRYNAL 272

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
             IP  I ++ K++  +++  N +  +P  L     LTEL +G++ ++ + ++I  L ++
Sbjct: 273 TAIPDEI-TKLKSMKILDLSSNNIAKIPDSLCALEQLTELYMGSDALTAIPDEITKLKSM 331

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
           ++L LS +   K+P S+  L +L  L++  N L ++P+EI  LK L+ L L  N +  +P
Sbjct: 332 KILDLSFSKFAKIPDSLCTLEQLTKLNMHYNALTAIPDEITKLKSLKILNLNHNNIAKIP 391

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMS 548
            ++  L  L+ L++  N L +IP+EI  L+++ TL L+ N  +  IP   +LC+  Q+  
Sbjct: 392 DSLCALEQLTELNMVSNALTAIPDEISKLKSMKTLNLSFNK-IAKIPD--SLCALEQLTE 448

Query: 549 LD--NCPLSQIPS 559
           LD  +  L+ IPS
Sbjct: 449 LDMMSNALTSIPS 461



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 107/201 (53%), Gaps = 2/201 (0%)

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
           +    N+I KIP  + +  + L+++ M  N LT++P ++G    +  LNL  N+I+K+ +
Sbjct: 150 LKLSSNKIAKIPDSLCA-LEQLTELYMGYNALTAIPDEIGKLKNMNILNLTFNKIAKIPD 208

Query: 421 DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQ 480
            +  L  L  L +  N L  +P  IG L+ +K L L  N +E +P+ +  L++L  L ++
Sbjct: 209 SLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNNIEKIPDSLCALEQLTELNVR 268

Query: 481 SNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELAL 540
            N L ++P  I  L ++  L +  NN+  IP+ +  LE L  LY+  +  L  IP E+  
Sbjct: 269 YNALTAIPDEITKLKSMKILDLSSNNIAKIPDSLCALEQLTELYMGSD-ALTAIPDEITK 327

Query: 541 CSNLQIMSLDNCPLSQIPSEI 561
             +++I+ L     ++IP  +
Sbjct: 328 LKSMKILDLSFSKFAKIPDSL 348



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 5/207 (2%)

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
           TS Y+   ++N +  +P  I      L K+ +  N +  +P  L     LTEL +G N +
Sbjct: 125 TSTYT---QNNGLTIVPRKI-GECHELQKLKLSSNKIAKIPDSLCALEQLTELYMGYNAL 180

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           + + ++I  L N+ +L L+ N + K+P S+  L +L  L +E N L ++P+EIG LK ++
Sbjct: 181 TAIPDEIGKLKNMNILNLTFNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMK 240

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
            L L +N +  +P ++  L  L+ L+V  N L +IP+EI  L+++  L L+ N  +  IP
Sbjct: 241 ILKLNNNNIEKIPDSLCALEQLTELNVRYNALTAIPDEITKLKSMKILDLSSNN-IAKIP 299

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEIV 562
             L     L  + + +  L+ IP EI 
Sbjct: 300 DSLCALEQLTELYMGSDALTAIPDEIT 326


>gi|365920060|ref|ZP_09444414.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
 gi|364578571|gb|EHM55771.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
          Length = 412

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 114/342 (33%), Positives = 182/342 (53%), Gaps = 7/342 (2%)

Query: 187 MVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDL 246
           +V+ KL   + L+ +  +   +  +I  LSNL  L +    + ELP E+G+L NL  LDL
Sbjct: 43  LVLQKLVLFRKLFRK--QFALLPAEIGQLSNLQELVLFWGDLTELPAEIGQLNNLQKLDL 100

Query: 247 AHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSK 306
             N L  LP  IG  + L  L L  N+LV +P  +G L NL  L L +N+L  +P T+ +
Sbjct: 101 TGNQLNTLPATIGQLSNLQKLSLGDNQLVILPVAIGQLGNLQELDLWHNQLTVLPATIGQ 160

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
             +L   N+    L++LP G+   L ++  ++L  N+ T  P+    Q  ++  +    +
Sbjct: 161 LGNLQVLNLRENKLTTLPAGI-GQLGNLQKLSLGSNRLTTLPAE-IGQLHNLQELILCED 218

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
           Q+  +P  I  +  NL K+ +  + L +LP  +G    L  + + ++ + +L + + +L 
Sbjct: 219 QLTTLPVEI-GQLGNLQKLYLLGHQLAALPNSIGQLSNLQSITIDSHLLLELIDMVPHLP 277

Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
            L+ L L N  L  LP+ IG L  L+ LDL +N++ +LP+ IG L  LQ+L L  N+L +
Sbjct: 278 KLKYLSLRN--LTTLPTKIGQLSNLQKLDLSDNQITALPDAIGQLSNLQKLNLSGNKLTA 335

Query: 487 LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           LP  IG L NL  L +  N L ++PE I  L NL  + L DN
Sbjct: 336 LPDVIGQLDNLQELDLSGNKLATLPESIDQLHNLQIINLRDN 377



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 197/367 (53%), Gaps = 9/367 (2%)

Query: 86  QADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGY 145
           +A L  +K  L   ++ +L   L +     LP  + +L++L+EL L+   L  LP++IG 
Sbjct: 32  EAALPRDKAELLVLQKLVLFRKLFRKQFALLPAEIGQLSNLQELVLFWGDLTELPAEIGQ 91

Query: 146 VTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRI 205
           + NL  L L  N L +LP ++  L  L+ L L  N+L  LP+ + +L +L+ L L  N++
Sbjct: 92  LNNLQKLDLTGNQLNTLPATIGQLSNLQKLSLGDNQLVILPVAIGQLGNLQELDLWHNQL 151

Query: 206 KTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
             +   I  L NL +L++R+NK+  LP  +G+L NL  L L  N L  LP EIG    L 
Sbjct: 152 TVLPATIGQLGNLQVLNLRENKLTTLPAGIGQLGNLQKLSLGSNRLTTLPAEIGQLHNLQ 211

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
            L L  ++L  +P  +G L NL +L L  ++L ++P ++ +  +L    ++   L  L D
Sbjct: 212 ELILCEDQLTTLPVEIGQLGNLQKLYLLGHQLAALPNSIGQLSNLQSITIDSHLLLELID 271

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
            ++  L  +  ++L RN  T  P+    Q +++  ++   NQI  +P  I  +  NL K+
Sbjct: 272 -MVPHLPKLKYLSL-RN-LTTLPT-KIGQLSNLQKLDLSDNQITALPDAI-GQLSNLQKL 326

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNL----LKKL 441
           N+  N LT+LP  +G    L EL+L  N+++ L E I  L NL+++ L +N+    L  L
Sbjct: 327 NLSGNKLTALPDVIGQLDNLQELDLSGNKLATLPESIDQLHNLQIINLRDNMLGYNLDVL 386

Query: 442 PSSIGNL 448
           P+SI  L
Sbjct: 387 PNSIQRL 393



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 87/244 (35%), Positives = 130/244 (53%), Gaps = 3/244 (1%)

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
           C   ++F++   AL      LL     +    L R +F   P+    Q +++  +     
Sbjct: 22  CAWADKFDISEAALPRDKAELLVLQKLVLFRKLFRKQFALLPAE-IGQLSNLQELVLFWG 80

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLV 426
            + ++P  I  +  NL K+++  N L +LP  +G    L +L+LG NQ+  L   I  L 
Sbjct: 81  DLTELPAEI-GQLNNLQKLDLTGNQLNTLPATIGQLSNLQKLSLGDNQLVILPVAIGQLG 139

Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
           NL+ L L +N L  LP++IG L  L+ L+L ENKL +LP  IG L  LQ+L L SN+L +
Sbjct: 140 NLQELDLWHNQLTVLPATIGQLGNLQVLNLRENKLTTLPAGIGQLGNLQKLSLGSNRLTT 199

Query: 487 LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQI 546
           LP  IG L NL  L + E+ L ++P EIG L NL  LYL  +  L  +P  +   SNLQ 
Sbjct: 200 LPAEIGQLHNLQELILCEDQLTTLPVEIGQLGNLQKLYLLGHQ-LAALPNSIGQLSNLQS 258

Query: 547 MSLD 550
           +++D
Sbjct: 259 ITID 262



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 127/254 (50%), Gaps = 22/254 (8%)

Query: 328 LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
           +  L+++  + L     T  P+    Q  ++  ++   NQ++ +P  I  +  NL K+++
Sbjct: 66  IGQLSNLQELVLFWGDLTELPAE-IGQLNNLQKLDLTGNQLNTLPATI-GQLSNLQKLSL 123

Query: 388 KDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN 447
            DN L  LP+ +G    L EL+L  NQ++ L   I  L NL+VL L  N L  LP+ IG 
Sbjct: 124 GDNQLVILPVAIGQLGNLQELDLWHNQLTVLPATIGQLGNLQVLNLRENKLTTLPAGIGQ 183

Query: 448 LRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           L  L+ L L  N+L +LP EIG L  LQ LIL  +QL +LP  IG L NL  L +  + L
Sbjct: 184 LGNLQKLSLGSNRLTTLPAEIGQLHNLQELILCEDQLTTLPVEIGQLGNLQKLYLLGHQL 243

Query: 508 QSIPEEIGTLENLHTLYLNDNTC--------------------LNNIPFELALCSNLQIM 547
            ++P  IG L NL ++ ++ +                      L  +P ++   SNLQ +
Sbjct: 244 AALPNSIGQLSNLQSITIDSHLLLELIDMVPHLPKLKYLSLRNLTTLPTKIGQLSNLQKL 303

Query: 548 SLDNCPLSQIPSEI 561
            L +  ++ +P  I
Sbjct: 304 DLSDNQITALPDAI 317


>gi|256090463|ref|XP_002581209.1| cell polarity protein; leucine-rich repeat protein; scribble
           complex protein [Schistosoma mansoni]
          Length = 1456

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 195/384 (50%), Gaps = 32/384 (8%)

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
           ++  +  L L  N+L  LP+ IG  +NL  L ++ N ++ LP S+     L+ LD+ +N 
Sbjct: 66  RMKRIRLLTLSDNELTRLPTGIGSFSNLVELDISRNDISELPASIRFCDSLQSLDVSNNP 125

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L  LP    +L +L++L L    I  +  +I  L  L  L +RDN ++ +P    +L +L
Sbjct: 126 LQSLPAGFCQLRNLRVLCLNDISIAELPEEIGSLQLLEKLELRDNCLKSIPDSFADLIHL 185

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
             LDL  N  +EL   IG  + L  L +  NEL ++P  LGNL NL +L LS N + ++P
Sbjct: 186 EFLDLGANEFQELSPVIGQLSQLSELWIDDNELRSLPKELGNLGNLQQLDLSENLISTLP 245

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK-FTAYPSGGPTQFTSVYS 360
           E++S  V L++ N+   +++ LP+G L  L  +  + L++N+  T  P+ G         
Sbjct: 246 ESISGLVSLSDLNLSQNSITHLPNG-LGDLDKLIILKLNQNRLLTVTPTIG--------- 295

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
                               +L ++ + +N L+ LP  +G  V +  LN+  NQ+++L  
Sbjct: 296 -----------------NCSSLQELYLTENFLSKLPSSIGNLVSMFHLNVDQNQLTELPS 338

Query: 421 DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQ 480
           +I    +L +L L  N L +LP  IGN  +L+ LD+  N+L+ LP  +     L  L L 
Sbjct: 339 EIGQCTSLNILSLRENNLHRLPDEIGNCTRLRVLDVSGNRLDRLPFSLSRCS-LTALWLS 397

Query: 481 SNQ---LVSLPRAIGHLTNLSYLS 501
            NQ   +++L R +  +T   YL+
Sbjct: 398 QNQSQPVITLQRDVDPVTQEQYLT 421



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 193/393 (49%), Gaps = 36/393 (9%)

Query: 175 LDLRHNKLNELPM-VVYKLTSLKILYLRFNRIKTV--------HPDIQYLSNLSMLSMRD 225
           +D RH+KL ++P  V+    +L+   L  N+IK +              +  + +L++ D
Sbjct: 18  IDRRHSKLEQVPDDVIRNFRTLEECRLDANQIKELPKHRASIXXXXFFRMKRIRLLTLSD 77

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  LP  +G   NLV LD++ N + ELP  I  C  L +LD+ +N L ++P     L 
Sbjct: 78  NELTRLPTGIGSFSNLVELDISRNDISELPASIRFCDSLQSLDVSNNPLQSLPAGFCQLR 137

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL  L L+   +  +PE +     L +  +    L S+PD   + L  +  + L  N+F 
Sbjct: 138 NLRVLCLNDISIAELPEEIGSLQLLEKLELRDNCLKSIPDSF-ADLIHLEFLDLGANEFQ 196

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
                                        +  +   LS++ + DN L SLP +LG    L
Sbjct: 197 ELSP-------------------------VIGQLSQLSELWIDDNELRSLPKELGNLGNL 231

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
            +L+L  N IS L E I  LV+L  L LS N +  LP+ +G+L KL  L L +N+L ++ 
Sbjct: 232 QQLDLSENLISTLPESISGLVSLSDLNLSQNSITHLPNGLGDLDKLIILKLNQNRLLTVT 291

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
             IG    LQ L L  N L  LP +IG+L ++ +L+V +N L  +P EIG   +L+ L L
Sbjct: 292 PTIGNCSSLQELYLTENFLSKLPSSIGNLVSMFHLNVDQNQLTELPSEIGQCTSLNILSL 351

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            +N  L+ +P E+  C+ L+++ +    L ++P
Sbjct: 352 RENN-LHRLPDEIGNCTRLRVLDVSGNRLDRLP 383



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 172/359 (47%), Gaps = 50/359 (13%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N++ LD+S++ I+ LP S+     L+ L +  N L SLP+    + NL  L L + S+  
Sbjct: 92  NLVELDISRNDISELPASIRFCDSLQSLDVSNNPLQSLPAGFCQLRNLRVLCLNDISIAE 151

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP+ + +LQ L  L+LR N L  +P     L  L+ L L  N  + + P I  LS LS L
Sbjct: 152 LPEEIGSLQLLEKLELRDNCLKSIPDSFADLIHLEFLDLGANEFQELSPVIGQLSQLSEL 211

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + DN++R LP ELG L NL  LDL+ N +  LP+ I     L  L+L  N + ++P+ L
Sbjct: 212 WIDDNELRSLPKELGNLGNLQQLDLSENLISTLPESISGLVSLSDLNLSQNSITHLPNGL 271

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G+L  L  L+L+ NRL +V  T+  C  L E  +    LS LP       +SI N+    
Sbjct: 272 GDLDKLIILKLNQNRLLTVTPTIGNCSSLQELYLTENFLSKLP-------SSIGNL---- 320

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
                          S++ +N + NQ                        LT LP ++G 
Sbjct: 321 --------------VSMFHLNVDQNQ------------------------LTELPSEIGQ 342

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
              L  L+L  N + +L ++I N   L VL +S N L +LP S+     L  L L +N+
Sbjct: 343 CTSLNILSLRENNLHRLPDEIGNCTRLRVLDVSGNRLDRLPFSLSRC-SLTALWLSQNQ 400


>gi|426342830|ref|XP_004038035.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Gorilla gorilla gorilla]
          Length = 560

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 218/460 (47%), Gaps = 54/460 (11%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +D S  S+T +P  +   T LEE++L  N++  +P +I  + N+  L L +N+L SL  +
Sbjct: 30  IDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPA 89

Query: 166 ------------------------LANLQQLRVLDLRHNKLNELPMVVYK---------- 191
                                   ++ L  LR L L    L E+P+V+ K          
Sbjct: 90  LGLLSSLESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVICKNLHHLELLGL 149

Query: 192 --------------LTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
                          T L+ +YL+ N+ +    ++  L  L ++ + +NKI  +P E+G 
Sbjct: 150 TGNHLKCLPKEIVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPEEIGH 209

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L  L    +A N+L  LP  +  C+ L  LDL HN L +IP  L  L  +T + LS NRL
Sbjct: 210 LTGLQKFHMASNNLPVLPASLCQCSQLSVLDLSHNLLHSIPKSLAELRKMTEIGLSGNRL 269

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
           E VP  + +   L+   +    L  LP G    L ++  + LS+N     P        +
Sbjct: 270 EKVPRLICRWTSLHLLYLGNTGLHRLP-GSFRCLINLRFLDLSQNHLDHCPLQ-ICALKN 327

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +  +  + N+I ++P  + S +K L  + +  N   S P ++ +   L +L +G +Q  K
Sbjct: 328 LEVLGLDDNKIGQLPSELGSLSK-LKILGLTGNEFLSFPEEVLSLASLEKLYIGQDQGFK 386

Query: 418 LS---EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           L+   E I+ L +L+ L + NN L+ LP S+G++  L+ LD   N L+ LP+ I   + L
Sbjct: 387 LTYVPEHIRKLQSLKELYIENNHLEYLPVSLGSMPNLEVLDCRHNLLKQLPDAICQAQAL 446

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           + L L+ N L  LP  +  L NL  L++ +N ++  P+E+
Sbjct: 447 KELRLEDNLLTHLPENLDSLVNLKVLTLMDNPMEEPPKEV 486



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 191/410 (46%), Gaps = 49/410 (11%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
            +D  +  L  +P+ ++  T L+ ++L  N+I+ +  +IQ L N+ +L +  N +R L P
Sbjct: 29  FIDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCP 88

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
            LG L +L +LDL++N +          + LV +   H               L  LRL 
Sbjct: 89  ALGLLSSLESLDLSYNPIFS--------SSLVVVSFLHA--------------LRELRLY 126

Query: 294 YNRLESVPETLSKCVH-LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
              L+ +P  + K +H L    + G  L  LP  +++  T +  I L RN+F  +P    
Sbjct: 127 QTDLKEIPVVICKNLHHLELLGLTGNHLKCLPKEIVNQ-TKLREIYLKRNQFEVFPQELC 185

Query: 353 TQFTSVYSINFEHNQIDKIPYGI--------FSRAKN--------------LSKVNMKDN 390
             +T +  I+ + N+I  IP  I        F  A N              LS +++  N
Sbjct: 186 VLYT-LEIIDLDENKIGAIPEEIGHLTGLQKFHMASNNLPVLPASLCQCSQLSVLDLSHN 244

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
           LL S+P  L     +TE+ L  N++ K+   I    +L +L L N  L +LP S   L  
Sbjct: 245 LLHSIPKSLAELRKMTEIGLSGNRLEKVPRLICRWTSLHLLYLGNTGLHRLPGSFRCLIN 304

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L+ LDL +N L+  P +I  LK L+ L L  N++  LP  +G L+ L  L +  N   S 
Sbjct: 305 LRFLDLSQNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLSKLKILGLTGNEFLSF 364

Query: 511 PEEIGTLENLHTLYLNDNTC--LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           PEE+ +L +L  LY+  +    L  +P  +    +L+ + ++N  L  +P
Sbjct: 365 PEEVLSLASLEKLYIGQDQGFKLTYVPEHIRKLQSLKELYIENNHLEYLP 414



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 111/258 (43%), Gaps = 64/258 (24%)

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS-NNL------ 437
           ++  +  LT++PL++ T+  L E++L  NQI ++ ++IQ L N+ VL L  NNL      
Sbjct: 30  IDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPA 89

Query: 438 ----------------------------------------LKKLPSSI-GNLRKLKCLDL 456
                                                   LK++P  I  NL  L+ L L
Sbjct: 90  LGLLSSLESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVICKNLHHLELLGL 149

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N L+ LP EI    +L+ + L+ NQ    P+ +  L  L  + + EN + +IPEEIG 
Sbjct: 150 TGNHLKCLPKEIVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPEEIGH 209

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP---------SEIVVGG-- 565
           L  L   ++  N  L  +P  L  CS L ++ L +  L  IP         +EI + G  
Sbjct: 210 LTGLQKFHMASNN-LPVLPASLCQCSQLSVLDLSHNLLHSIPKSLAELRKMTEIGLSGNR 268

Query: 566 ----PSLIIRYLKMQGPY 579
               P LI R+  +   Y
Sbjct: 269 LEKVPRLICRWTSLHLLY 286


>gi|410929299|ref|XP_003978037.1| PREDICTED: protein LAP2-like [Takifugu rubripes]
          Length = 1355

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 185/385 (48%), Gaps = 28/385 (7%)

Query: 175 LDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           LD  H  L  +P  ++    +L+ LYL  N+I+ +   +     L  LSM DN +  LP 
Sbjct: 42  LDYSHCSLETVPKEIFSFEKTLQELYLDANQIEELPKQLFNCQVLHRLSMPDNDLAVLPA 101

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
            +  L NL  LD++ N ++E P+ I NC +L  ++   N +  +P+    L++LT+L L+
Sbjct: 102 AIANLINLRELDVSKNSIQEFPENIKNCKVLAIVEASVNPISKLPEGFTQLLSLTQLYLN 161

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              LE +P +  +   L    +    L  LP  +   LT +  + L  N+FT  P     
Sbjct: 162 DAFLEFLPASFGRLTKLQILELRENQLKVLPKSM-QKLTQLERLDLGSNEFTEVPE---- 216

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
                                +  +   + ++ M  N LT LP  LG    L  L++  N
Sbjct: 217 ---------------------VLDQLGGIRELWMDGNRLTFLPGMLGKLKQLVYLDVSKN 255

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
            +  + E I    +L+ L+LSNN L +LP SIG+L+KL  L ++EN+L  LP+ IG L  
Sbjct: 256 NLEMVDEQICGCESLQDLLLSNNALTQLPGSIGSLKKLTALKVDENQLMYLPDSIGGLTS 315

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L  L    N++ +LP +IG    +   +   N L  +P E+G  +N   L+L+ N  L +
Sbjct: 316 LDELDCSFNEIEALPSSIGQCVGIRTFAADHNFLVQLPPEMGNWKNATVLFLHSNK-LES 374

Query: 534 IPFELALCSNLQIMSLDNCPLSQIP 558
           +P E+     L++++L N  L  +P
Sbjct: 375 LPEEMGDMQKLKVINLSNNKLKNLP 399



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 182/395 (46%), Gaps = 31/395 (7%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE + +LD S  S+  +P  +      L+ELYL  N++  LP Q+     L  L +
Sbjct: 32  LRGEEEAVTSLDYSHCSLETVPKEIFSFEKTLQELYLDANQIEELPKQLFNCQVLHRLSM 91

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L  LP ++ANL  LR LD+  N + E P  +     L I+    N I  +      
Sbjct: 92  PDNDLAVLPAAIANLINLRELDVSKNSIQEFPENIKNCKVLAIVEASVNPISKLPEGFTQ 151

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L +L+ L + D  +  LP   G L  L  L+L  N L+ LPK +   T L  LDL  NE 
Sbjct: 152 LLSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQLKVLPKSMQKLTQLERLDLGSNEF 211

Query: 275 VNI-----------------------PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN 311
             +                       P MLG L  L  L +S N LE V E +  C  L 
Sbjct: 212 TEVPEVLDQLGGIRELWMDGNRLTFLPGMLGKLKQLVYLDVSKNNLEMVDEQICGCESLQ 271

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQID 369
           +  +   AL+ LP G + SL  +  + +  N+    P   GG    TS+  ++   N+I+
Sbjct: 272 DLLLSNNALTQLP-GSIGSLKKLTALKVDENQLMYLPDSIGG---LTSLDELDCSFNEIE 327

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
            +P  I  +   +       N L  LP ++G W   T L L +N++  L E++ ++  L+
Sbjct: 328 ALPSSI-GQCVGIRTFAADHNFLVQLPPEMGNWKNATVLFLHSNKLESLPEEMGDMQKLK 386

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           V+ LSNN LK LP S   L ++  + L EN+ + L
Sbjct: 387 VINLSNNKLKNLPYSFTKLSQMTAMWLSENQSKPL 421



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 1/203 (0%)

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS 416
           +V S+++ H  ++ +P  IFS  K L ++ +  N +  LP  L     L  L++  N ++
Sbjct: 38  AVTSLDYSHCSLETVPKEIFSFEKTLQELYLDANQIEELPKQLFNCQVLHRLSMPDNDLA 97

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQR 476
            L   I NL+NL  L +S N +++ P +I N + L  ++   N +  LP     L  L +
Sbjct: 98  VLPAAIANLINLRELDVSKNSIQEFPENIKNCKVLAIVEASVNPISKLPEGFTQLLSLTQ 157

Query: 477 LILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
           L L    L  LP + G LT L  L + EN L+ +P+ +  L  L  L L  N     +P 
Sbjct: 158 LYLNDAFLEFLPASFGRLTKLQILELRENQLKVLPKSMQKLTQLERLDLGSNE-FTEVPE 216

Query: 537 ELALCSNLQIMSLDNCPLSQIPS 559
            L     ++ + +D   L+ +P 
Sbjct: 217 VLDQLGGIRELWMDGNRLTFLPG 239



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 65/128 (50%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L + ++ + +LP S+  LT L+EL    N++ +LPS IG    +       N L  LP  
Sbjct: 296 LKVDENQLMYLPDSIGGLTSLDELDCSFNEIEALPSSIGQCVGIRTFAADHNFLVQLPPE 355

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + N +   VL L  NKL  LP  +  +  LK++ L  N++K +      LS ++ + + +
Sbjct: 356 MGNWKNATVLFLHSNKLESLPEEMGDMQKLKVINLSNNKLKNLPYSFTKLSQMTAMWLSE 415

Query: 226 NKIRELPP 233
           N+ + L P
Sbjct: 416 NQSKPLIP 423


>gi|350425451|ref|XP_003494125.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Bombus
           impatiens]
          Length = 602

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 246/513 (47%), Gaps = 76/513 (14%)

Query: 88  DLNIEKEFLR-----CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQ 142
           DL+ E ++++      ++E +  LDLS +++  + P +E LT L  LYL+ N+L  LP++
Sbjct: 67  DLHFELDYVQETERWWEQEPLQTLDLSCNTLKKIDPQIENLTELTTLYLHNNRLEDLPAE 126

Query: 143 IGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
           IG +  L  L L+ N L   P     L +LR L+L++N + EL   V     L  L L +
Sbjct: 127 IGNLKKLNILNLSNNKLEKFPHEFYKLNELRELNLKNNSIKELDPAVGDFVMLTYLDLSY 186

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N +  +   + YL  L+ L +  N ++ELPP+L  ++ L  L+ ++N LE LP  +G   
Sbjct: 187 NNLIELPIGMGYLVRLTSLDLSHNMLKELPPDLTNMRALQKLNASYNQLEMLPP-LGELR 245

Query: 263 MLVTLDLQHNELVNIPDMLGNLI-----------------------NLTRLRLSYNRLES 299
            + T+ LQ N+L   PD+ G ++                        L  L L  N++E+
Sbjct: 246 KVETVMLQSNKLTTFPDISGCILLRVLHLADNNITEIDMSCLEGVGQLKTLTLGNNQIET 305

Query: 300 VPETLSKCVHLNEFNVEGCALSSLPD--GLLSSL-------TSINNI------------- 337
           +PE + K V+L  F++    L+ +P   GLL +L         I N+             
Sbjct: 306 IPEEIIKLVYLEIFDLSHNKLTLIPKYIGLLPNLKQFAIDGNDIQNVRTDIIRCGTSRIL 365

Query: 338 -----------------TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA- 379
                             ++      YP     Q T + S+  ++  + ++P  +   A 
Sbjct: 366 KHIRQGIKSTNLDVKEHVVADTSTNIYPDRYTMQSTKLLSLAGQN--LTELPQEVLENAC 423

Query: 380 -KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI-QNLVNLEVLVLSNNL 437
             ++  V++  N L+ LP  L     + +L L +NQ++ + E I +    L++L LS NL
Sbjct: 424 KADVGTVDLSRNKLSILPDKLCIIERIADLKLTSNQLTHIPEWIGEKYKYLQILDLSRNL 483

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL--VSLPRAIGHLT 495
           L+ LP ++G L+ L+ L++  N+ + +P  +  +  L+ LI   N +  + +P +   L 
Sbjct: 484 LQSLPINLGLLKYLQELNISFNRYKEIPESVYAINSLEILIANDNLITDIDVP-SFQKLQ 542

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            L+ L++  NN+  +P E+GTL+NL  L L+ N
Sbjct: 543 KLAILNLANNNIGFVPPELGTLKNLRNLSLSGN 575


>gi|355699846|gb|AES01257.1| leucine rich repeat containing 1 [Mustela putorius furo]
          Length = 404

 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 176/347 (50%), Gaps = 27/347 (7%)

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N+++ +      L  L  L + DN+I+ LPPE+     LV LD++ N + E+P+ I  C 
Sbjct: 79  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 138

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L   D   N L  +P+    L NLT L ++   L+S+PE +    +L    +    L+ 
Sbjct: 139 ALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTY 198

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LPD L                         TQ   +  ++  +N+I  +P  I +   +L
Sbjct: 199 LPDSL-------------------------TQLRRLEELDLGNNEIYNLPESIGA-LLHL 232

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             + +  N L+ LP ++G    L  L++  N++ +L E+I  L +L  LV+S NLL+ +P
Sbjct: 233 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEVIP 292

Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
             IG L+KL  L +++N+L  LP  +G  + L  L+L  N+L++LP++IG L  LS L+ 
Sbjct: 293 DGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNA 352

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
             N L S+P+EIG   +L    + DN  L  IP E++  + L ++ +
Sbjct: 353 DRNKLVSLPKEIGGCCSLTVFCVRDNR-LTRIPSEVSQATELHVLDV 398



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 162/339 (47%), Gaps = 56/339 (16%)

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L ELP++      L  L L  NE+  +P  + N + L  L +S N +  +PE++S C 
Sbjct: 79  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 138

Query: 309 HLNEFNVEGCALSSLPDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQFTSVYSINFE 364
            L   +  G  L+ LP+    L +LT  S+N+I+L            P    ++Y     
Sbjct: 139 ALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQ---------SLPENIGNLY----- 184

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN 424
                           NL+ + +++NLLT LP  L     L EL+LG N+I  L E I  
Sbjct: 185 ----------------NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGA 228

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
           L++L+ L L  N L +LP  IGNL+ L CLD+ EN+LE LP EI  L  L  L++  N L
Sbjct: 229 LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLL 288

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN------------ 532
             +P  IG L  LS L V +N L  +PE +G  E+L  L L +N  L             
Sbjct: 289 EVIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLS 348

Query: 533 ----------NIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                     ++P E+  C +L +  + +  L++IPSE+
Sbjct: 349 NLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPSEV 387



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 174/374 (46%), Gaps = 49/374 (13%)

Query: 134 NKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLT 193
           N+L  LP Q   +  L  LGL++N +  LP  +AN  QL  LD+  N + E+P  +    
Sbjct: 79  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 138

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           +L+I     N +  +      L NL+ LS+ D  ++ LP  +G L NL +L+L  N L  
Sbjct: 139 ALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTY 198

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LP  +     L  LDL +NE+ N+P+ +G L++L  L L  N+L  +P+ +    +L   
Sbjct: 199 LPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCL 258

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
           +V    L  LP+ + S LTS+ ++ +S                         N ++ IP 
Sbjct: 259 DVSENRLERLPEEI-SGLTSLTDLVIS------------------------QNLLEVIPD 293

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
           GI  + K LS + +  N LT LP  +G    LTEL                       VL
Sbjct: 294 GI-GKLKKLSILKVDQNRLTQLPEAVGDCESLTEL-----------------------VL 329

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
           + N L  LP SIG L+KL  L+ + NKL SLP EIG    L    ++ N+L  +P  +  
Sbjct: 330 TENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPSEVSQ 389

Query: 494 LTNLSYLSVGENNL 507
            T L  L V  N L
Sbjct: 390 ATELHVLDVAGNRL 403



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 102/293 (34%), Positives = 154/293 (52%), Gaps = 7/293 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 117 LVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 176

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 177 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 236

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 237 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEVIPDGIG 296

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE +  C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 297 KLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKS-IGKLKKLSNLNADRN 355

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L 
Sbjct: 356 KLVSLPKEIGGCCSLT-VFCV--RDNRLTRIPSEV-SQATELHVLDVAGNRLV 404



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 174/350 (49%), Gaps = 28/350 (8%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           +  LP    +L  L +L L  N++  LP +I     L  L ++ N +  +P+S++  + L
Sbjct: 81  LRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKAL 140

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
           ++ D   N L  LP    +L +L  L +    ++++  +I  L NL+ L +R+N +  LP
Sbjct: 141 QIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLP 200

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
             L +L+ L  LDL +N +  LP+ IG    L  L L  N+L  +P  +GNL NL  L +
Sbjct: 201 DSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDV 260

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG-G 351
           S NRLE +PE                         +S LTS+ ++ +S+N     P G G
Sbjct: 261 SENRLERLPEE------------------------ISGLTSLTDLVISQNLLEVIPDGIG 296

Query: 352 PTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLG 411
             +  S+  +  + N++ ++P  +    ++L+++ + +N L +LP  +G    L+ LN  
Sbjct: 297 KLKKLSILKV--DQNRLTQLPEAV-GDCESLTELVLTENRLLTLPKSIGKLKKLSNLNAD 353

Query: 412 TNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
            N++  L ++I    +L V  + +N L ++PS +    +L  LD+  N+L
Sbjct: 354 RNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPSEVSQATELHVLDVAGNRL 403



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 150/333 (45%), Gaps = 26/333 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + I  LPP +     L EL +  N +  +P  I +   L     + N LT LP+S
Sbjct: 97  LGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPES 156

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
              LQ L  L +    L  LP  +  L +L  L LR N +  +   +  L  L  L + +
Sbjct: 157 FPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGN 216

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I  LP  +G L +L  L L  N L ELP+EIGN   L+ LD+  N L  +P+ +  L 
Sbjct: 217 NEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLT 276

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +LT L +S N LE +P+ + K   L+   V+   L+ LP+  +    S+  + L+ N+  
Sbjct: 277 SLTDLVISQNLLEVIPDGIGKLKKLSILKVDQNRLTQLPEA-VGDCESLTELVLTENRLL 335

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                             + K LS +N   N L SLP ++G    L
Sbjct: 336 TLPKS-------------------------IGKLKKLSNLNADRNKLVSLPKEIGGCCSL 370

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
           T   +  N+++++  ++     L VL ++ N L
Sbjct: 371 TVFCVRDNRLTRIPSEVSQATELHVLDVAGNRL 403



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 121/216 (56%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +L+L ++ +T+LP S+ +L  LEEL L  N++ +LP  IG + +L  L L  N L+ 
Sbjct: 185 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 244

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + NL+ L  LD+  N+L  LP  +  LTSL  L +  N ++ +   I  L  LS+L
Sbjct: 245 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEVIPDGIGKLKKLSIL 304

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++ +LP  +G+ ++L  L L  N L  LPK IG    L  L+   N+LV++P  +
Sbjct: 305 KVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 364

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           G   +LT   +  NRL  +P  +S+   L+  +V G
Sbjct: 365 GGCCSLTVFCVRDNRLTRIPSEVSQATELHVLDVAG 400


>gi|449433199|ref|XP_004134385.1| PREDICTED: receptor-like protein kinase 2-like [Cucumis sativus]
          Length = 1136

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 144/446 (32%), Positives = 218/446 (48%), Gaps = 37/446 (8%)

Query: 115 HLPPSVEKLTHLEELYLYGNK--LASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQ 171
            LPP + KL +LE L   GNK     +P + G  + L  LGLA+  ++  LP SL  L+ 
Sbjct: 188 FLPPDIGKLENLEVLRAGGNKEITGEIPPEFGNCSKLALLGLADTRISGRLPSSLGKLKN 247

Query: 172 LRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           LR L +    L  E+P  +   + L  LYL  NR+                         
Sbjct: 248 LRTLSIYTTLLSGEIPSDLGNCSELVDLYLYENRLSG----------------------S 285

Query: 231 LPPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLT 288
           +PP++G+LK L  L L  N+L   +PKEIGNC+ L  +D   N L   +P  LG L  L 
Sbjct: 286 IPPQIGDLKKLEQLFLWQNNLIGAIPKEIGNCSSLRRIDFSLNYLSGTLPLTLGKLSKLE 345

Query: 289 RLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
              +S N +  S+P +LS   +L +   +   +S L    L +L+ +  +   +N+    
Sbjct: 346 EFMISDNNVSGSIPSSLSDAKNLLQLQFDNNQISGLIPPELGTLSKLTVLLAWQNQLEGS 405

Query: 348 PSGGPTQFTSVYSINFEHNQIDK-IPYGIFSRAKNLSKVNMKDNLLTS-LPLDLGTWVGL 405
                   +S+ +I+  HN +   IP G+F + +NLSK+ +  N ++  +P ++G    L
Sbjct: 406 IPESLEGCSSLEAIDLSHNSLTGVIPSGLF-QLRNLSKLLLISNDISGPIPPEIGNGSSL 464

Query: 406 TELNLGTNQISK-LSEDIQNLVNLEVLVLSNNLLKK-LPSSIGNLRKLKCLDLEENKLES 463
             L LG N+I+  +   I  L +L+ L LS N +   LP  IGN ++L+ +DL  N LE 
Sbjct: 465 VRLRLGNNRITGGIPRTIGRLSSLDFLDLSGNRISGPLPDEIGNCKELQMIDLSYNALEG 524

Query: 464 -LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTLENL 520
            LPN +  L ELQ   + SN+ +  LP + G L +L+ L +  N L  SIP  +G    L
Sbjct: 525 PLPNSLASLSELQVFDVSSNRFLGELPGSFGSLVSLNKLVLRANLLSGSIPPSLGLCSGL 584

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQI 546
             L L++N    NIP EL     L+I
Sbjct: 585 QRLDLSNNHFTGNIPVELGQLDGLEI 610



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 212/487 (43%), Gaps = 84/487 (17%)

Query: 115 HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLT-SLPDSLANLQQL 172
            +P  +   + L +LYLY N+L  S+P QIG +  L  L L +N+L  ++P  + N   L
Sbjct: 261 EIPSDLGNCSELVDLYLYENRLSGSIPPQIGDLKKLEQLFLWQNNLIGAIPKEIGNCSSL 320

Query: 173 RVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIRE 230
           R +D   N L   LP+ + KL+ L+   +  N +    P  +    NL  L   +N+I  
Sbjct: 321 RRIDFSLNYLSGTLPLTLGKLSKLEEFMISDNNVSGSIPSSLSDAKNLLQLQFDNNQISG 380

Query: 231 L-PPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN------------ 276
           L PPELG L  L  L    N LE  +P+ +  C+ L  +DL HN L              
Sbjct: 381 LIPPELGTLSKLTVLLAWQNQLEGSIPESLEGCSSLEAIDLSHNSLTGVIPSGLFQLRNL 440

Query: 277 -------------IPDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSS 322
                        IP  +GN  +L RLRL  NR+   +P T+ +   L+  ++ G  +S 
Sbjct: 441 SKLLLISNDISGPIPPEIGNGSSLVRLRLGNNRITGGIPRTIGRLSSLDFLDLSGNRISG 500

Query: 323 -LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQ-IDKIPYGIFSRAK 380
            LPD +  +   +  I LS N             + +   +   N+ + ++P G F    
Sbjct: 501 PLPDEI-GNCKELQMIDLSYNALEGPLPNSLASLSELQVFDVSSNRFLGELP-GSFGSLV 558

Query: 381 NLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQISK-LSEDIQNLVNLEV-LVLSNN- 436
           +L+K+ ++ NLL+ S+P  LG   GL  L+L  N  +  +  ++  L  LE+ L LSNN 
Sbjct: 559 SLNKLVLRANLLSGSIPPSLGLCSGLQRLDLSNNHFTGNIPVELGQLDGLEIALNLSNNE 618

Query: 437 LLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
           L   +P  +  L KL  LDL  N LE      G LK L                   L+N
Sbjct: 619 LYGPIPPQMSALTKLSVLDLSRNNLE------GDLKPLA-----------------GLSN 655

Query: 497 LSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI-PFELA----LCSNLQ--IMSL 549
           L  L++  NN                 YL DN     + P +L     LCS+++    S+
Sbjct: 656 LVSLNISYNNFSG--------------YLPDNKLFRQLSPTDLTGNERLCSSIRDSCFSM 701

Query: 550 DNCPLSQ 556
           D   L++
Sbjct: 702 DGSGLTR 708



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 196/462 (42%), Gaps = 64/462 (13%)

Query: 116 LPPSVEKLTHLEELYLYG-NKLASLPSQIGYVTNLTCLGLAENSLT-SLPDSLANLQQLR 173
           LP ++     L++L + G N    +P  IG  T L  L L+ N+L  S+P S+ NL++L 
Sbjct: 93  LPSNLSSFRFLQKLVVSGANVTGKIPDDIGNCTELVVLDLSFNNLVGSIPGSIGNLRKLE 152

Query: 174 VLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKT-VHPDIQYLSNLSMLSMRDNK--IR 229
            L L  N+L   +P  +   +SLK L++  N +   + PDI  L NL +L    NK    
Sbjct: 153 DLILNGNQLTGSIPAELGFCSSLKNLFIFDNLLSGFLPPDIGKLENLEVLRAGGNKEITG 212

Query: 230 ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINL 287
           E+PPE G    L  L LA   +   LP  +G    L TL +    L   IP  LGN   L
Sbjct: 213 EIPPEFGNCSKLALLGLADTRISGRLPSSLGKLKNLRTLSIYTTLLSGEIPSDLGNCSEL 272

Query: 288 TRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
             L L  NRL  S+P  +     L +  +                               
Sbjct: 273 VDLYLYENRLSGSIPPQIGDLKKLEQLFL------------------------------- 301

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGL 405
                           +++N I  IP  I     +L +++   N L+ +LPL LG    L
Sbjct: 302 ----------------WQNNLIGAIPKEI-GNCSSLRRIDFSLNYLSGTLPLTLGKLSKL 344

Query: 406 TELNLGTNQIS-KLSEDIQNLVNLEVLVLSNNLLKKL-PSSIGNLRKLKCLDLEENKLE- 462
            E  +  N +S  +   + +  NL  L   NN +  L P  +G L KL  L   +N+LE 
Sbjct: 345 EEFMISDNNVSGSIPSSLSDAKNLLQLQFDNNQISGLIPPELGTLSKLTVLLAWQNQLEG 404

Query: 463 SLPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENL 520
           S+P  +     L+ + L  N L   +P  +  L NLS L +  N++   IP EIG   +L
Sbjct: 405 SIPESLEGCSSLEAIDLSHNSLTGVIPSGLFQLRNLSKLLLISNDISGPIPPEIGNGSSL 464

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ-IPSEI 561
             L L +N     IP  +   S+L  + L    +S  +P EI
Sbjct: 465 VRLRLGNNRITGGIPRTIGRLSSLDFLDLSGNRISGPLPDEI 506



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 110/206 (53%), Gaps = 8/206 (3%)

Query: 102 NILNLDLSKSSITH-LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSL 159
           +++ L L  + IT  +P ++ +L+ L+ L L GN+++  LP +IG    L  + L+ N+L
Sbjct: 463 SLVRLRLGNNRITGGIPRTIGRLSSLDFLDLSGNRISGPLPDEIGNCKELQMIDLSYNAL 522

Query: 160 TS-LPDSLANLQQLRVLDLRHNK-LNELPMVVYKLTSLKILYLRFNRIK-TVHPDIQYLS 216
              LP+SLA+L +L+V D+  N+ L ELP     L SL  L LR N +  ++ P +   S
Sbjct: 523 EGPLPNSLASLSELQVFDVSSNRFLGELPGSFGSLVSLNKLVLRANLLSGSIPPSLGLCS 582

Query: 217 NLSMLSMRDNKIR-ELPPELGELKNL-VTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNE 273
            L  L + +N     +P ELG+L  L + L+L++N L   +P ++   T L  LDL  N 
Sbjct: 583 GLQRLDLSNNHFTGNIPVELGQLDGLEIALNLSNNELYGPIPPQMSALTKLSVLDLSRNN 642

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLES 299
           L      L  L NL  L +SYN    
Sbjct: 643 LEGDLKPLAGLSNLVSLNISYNNFSG 668


>gi|426329995|ref|XP_004026013.1| PREDICTED: leucine-rich repeat-containing protein 40 [Gorilla
           gorilla gorilla]
          Length = 602

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 149/502 (29%), Positives = 238/502 (47%), Gaps = 39/502 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD+  + +T LP ++ +L +L++L +  NKL +LP +I  + NL CL L  N LT + + 
Sbjct: 110 LDIHDNQLTSLPSAIRELENLQKLNVSHNKLKTLPEEITNLRNLKCLYLQHNELTCISEG 169

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
              L  L  LDL +N L  +P     L+SL  L L  N +K++  +I  +  L  L    
Sbjct: 170 FEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNS 229

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTML--------------------- 264
           N +  +PPEL  +++L  L L  N L  LP E  +C++L                     
Sbjct: 230 NLLETIPPELAGMESLELLYLWRNKLRFLP-EFPSCSLLKELHVGENQIEMLEAEHLKHL 288

Query: 265 ---VTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
              + LDL+ N+L ++PD +  L +L RL LS N + S+P +L   +HL    +EG  L 
Sbjct: 289 NSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGN-LHLKFLALEGNPLR 347

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
           ++   +LS  T    +   R+K       GP+Q  S            ++        K 
Sbjct: 348 TIRREILSKGTQ-EVLKYLRSKIK---DDGPSQSESATETAMTLPSESRVNIHAIITLKI 403

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV----LSNNL 437
           L   + +  L+     D      +T +N   NQ+ ++    + +V L+ +V    LS N 
Sbjct: 404 LDYSDKQATLIPDEVFDAVKSNIITSVNFSKNQLCEIP---KRMVELKEMVSDVDLSFNK 460

Query: 438 LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNL 497
           L  +   +  L+KL  LDL  N L SLP E+  L  LQ + L  N+   LP  + H+  L
Sbjct: 461 LSFISLELCVLQKLTFLDLRNNFLNSLPEEMKSLVRLQTINLSFNRFKMLPEVLYHIFTL 520

Query: 498 SYLSVGENNLQSI-PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ 556
             + +  N + S+ P+++  +ENL TL L +N  L  IP EL  C NL+ + LD  P   
Sbjct: 521 ETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQ-IPPELGNCVNLRTLLLDGNPFRV 579

Query: 557 IPSEIVVGGPSLIIRYLKMQGP 578
             + I++ G + I+ YL+ + P
Sbjct: 580 PRAAILMKGTAAILEYLRDRIP 601



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 159/303 (52%), Gaps = 29/303 (9%)

Query: 190 YKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHN 249
           ++ T L  L +  N+++++  D++ L  L++L + DN++  LP  + EL+NL  L+++HN
Sbjct: 79  WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN 138

Query: 250 HLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVH 309
            L+ LP+EI N   L  L LQHNEL  I +    L NL  L LS N L +VP +      
Sbjct: 139 KLKTLPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPAS------ 192

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
                              SSL+S+  + LS N+  + P+    +   +  ++   N ++
Sbjct: 193 ------------------FSSLSSLVRLNLSSNELKSLPA-EINRMKRLKHLDCNSNLLE 233

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL-SEDIQNLVNL 428
            IP  + +  ++L  + +  N L  LP +  +   L EL++G NQI  L +E +++L ++
Sbjct: 234 TIPPEL-AGMESLELLYLWRNKLRFLP-EFPSCSLLKELHVGENQIEMLEAEHLKHLNSI 291

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
            VL L +N LK +P  I  L+ L+ LDL  N + SLP  +G L  L+ L L+ N L ++ 
Sbjct: 292 LVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIR 350

Query: 489 RAI 491
           R I
Sbjct: 351 REI 353



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 95/166 (57%), Gaps = 2/166 (1%)

Query: 86  QADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHL-EELYLYGNKLASLPSQIG 144
           QA L  ++ F   K   I +++ SK+ +  +P  + +L  +  ++ L  NKL+ +  ++ 
Sbjct: 410 QATLIPDEVFDAVKSNIITSVNFSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLELC 469

Query: 145 YVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR 204
            +  LT L L  N L SLP+ + +L +L+ ++L  N+   LP V+Y + +L+ + +  N+
Sbjct: 470 VLQKLTFLDLRNNFLNSLPEEMKSLVRLQTINLSFNRFKMLPEVLYHIFTLETILISNNQ 529

Query: 205 IKTVHPD-IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHN 249
           + +V P  ++ + NL+ L +++N + ++PPELG   NL TL L  N
Sbjct: 530 VGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGN 575



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 26/271 (9%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           +IL LDL  + +  +P  +  L  LE L L  N ++SLP  +G + +L  L L  N L +
Sbjct: 290 SILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRT 348

Query: 162 LPDSLANLQQLRVLDLRHNKLNE---------------LP----MVVYKLTSLKILYLRF 202
           +   + +     VL    +K+ +               LP    + ++ + +LKIL    
Sbjct: 349 IRREILSKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRVNIHAIITLKILDYS- 407

Query: 203 NRIKTVHPDIQY---LSN-LSMLSMRDNKIRELPPELGELKNLVT-LDLAHNHLEELPKE 257
           ++  T+ PD  +    SN ++ ++   N++ E+P  + ELK +V+ +DL+ N L  +  E
Sbjct: 408 DKQATLIPDEVFDAVKSNIITSVNFSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLE 467

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           +     L  LDL++N L ++P+ + +L+ L  + LS+NR + +PE L     L    +  
Sbjct: 468 LCVLQKLTFLDLRNNFLNSLPEEMKSLVRLQTINLSFNRFKMLPEVLYHIFTLETILISN 527

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
             + S+    +  + ++  + L  N     P
Sbjct: 528 NQVGSVDPQKMKMMENLTTLDLQNNDLLQIP 558


>gi|148230653|ref|NP_001085672.1| leucine-rich repeat-containing protein 40 [Xenopus laevis]
 gi|82236544|sp|Q6GPJ5.1|LRC40_XENLA RecName: Full=Leucine-rich repeat-containing protein 40
 gi|49257387|gb|AAH73124.1| MGC84527 protein [Xenopus laevis]
          Length = 605

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 235/486 (48%), Gaps = 40/486 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +  L  + +  LP S+  L+ LEEL +  N L S+ S +G +T L    L+ N LT
Sbjct: 151 QNLKSFLLQHNQLEELPDSIGHLSILEELDVSNNCLRSVSSSVGQLTGLVKFNLSSNKLT 210

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  ++ LR LD   N L  +P  V  + SL+ LYLR N++ T  P++ +L+ L  
Sbjct: 211 ALPTEIGKMKNLRQLDCTSNLLENVPASVAGMESLEQLYLRQNKL-TYLPELPFLTKLKE 269

Query: 221 LSMRDNKIRELPPE-LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
           L + +N+I+ L PE L  L +L  L+L +N L+ LPKEI     L  LDL +N++ ++PD
Sbjct: 270 LHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPKEISLLKGLERLDLSNNDIGSLPD 329

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            LG+L NL  L+L  N L  +   +     LN+   E   L  L   + +   +      
Sbjct: 330 TLGSLPNLKSLQLDGNPLRGIRRDI-----LNKGTQE--LLKYLKGRVQTPDMTTQEAAN 382

Query: 340 SRNKFTAYPSGG---PTQFTSVYSINFEHNQIDKIPYGIFSRAKN--LSKVNMKDNLLTS 394
             +     PS          ++ ++ +   Q   IP  +F+ A +  ++ VN   N LT 
Sbjct: 383 PPDTAMTLPSDSVINAHAIMTLKTLEYCEKQASLIPEAVFNAAASSPITTVNFSKNQLTE 442

Query: 395 LPLDLGTWV-GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +P  +      + ++NLG N+IS +S      +NL +L+                 KL  
Sbjct: 443 VPARIVEMKDSVYDVNLGFNKISSIS------LNLCMLL-----------------KLTH 479

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI-PE 512
           LD+  N L SLP E+  L  LQ +IL  N+    P  +  + NL  + +  N + SI P 
Sbjct: 480 LDMRNNALASLPPEMEALTRLQSIILSFNRFKHFPDVLYTIPNLETILISSNQIGSIDPI 539

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRY 572
           ++  +  L TL L +N  L  IP  L  C +L+ + L+  P     + I+  G   I+ Y
Sbjct: 540 QLKKMTKLSTLDLQNNDLL-QIPPALGNCESLRALHLEGNPFRNPRATILAKGTVAILEY 598

Query: 573 LKMQGP 578
           L+ + P
Sbjct: 599 LRSRIP 604



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 236/505 (46%), Gaps = 71/505 (14%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            ++ ++  L L+ + +  L   +  L  L  L ++ N++ASLP  I  +TNL  L ++ N
Sbjct: 79  WEQTDLTKLILASNKLQALSEDISLLPALVVLDIHDNQIASLPCAIRELTNLQKLNISHN 138

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            +  LP+ L +LQ L+   L+HN+L ELP  +  L+ L+ L +  N +++V   +  L+ 
Sbjct: 139 KIKQLPNELQHLQNLKSFLLQHNQLEELPDSIGHLSILEELDVSNNCLRSVSSSVGQLTG 198

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L   ++  NK+  LP E+G++KNL  LD   N LE +P  +     L  L L+ N+L  +
Sbjct: 199 LVKFNLSSNKLTALPTEIGKMKNLRQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYL 258

Query: 278 PDM-----------------------LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P++                       L NL +L+ L L YN+L+ +P+ +S    L   +
Sbjct: 259 PELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPKEISLLKGLERLD 318

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRN----------------------------KFTA 346
           +    + SLPD  L SL ++ ++ L  N                              T 
Sbjct: 319 LSNNDIGSLPDT-LGSLPNLKSLQLDGNPLRGIRRDILNKGTQELLKYLKGRVQTPDMTT 377

Query: 347 YPSGGP--TQFT-------------SVYSINFEHNQIDKIPYGIFSRAKN--LSKVNMKD 389
             +  P  T  T             ++ ++ +   Q   IP  +F+ A +  ++ VN   
Sbjct: 378 QEAANPPDTAMTLPSDSVINAHAIMTLKTLEYCEKQASLIPEAVFNAAASSPITTVNFSK 437

Query: 390 NLLTSLPLDLGTWV-GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
           N LT +P  +      + ++NLG N+IS +S ++  L+ L  L + NN L  LP  +  L
Sbjct: 438 NQLTEVPARIVEMKDSVYDVNLGFNKISSISLNLCMLLKLTHLDMRNNALASLPPEMEAL 497

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL-PRAIGHLTNLSYLSVGENNL 507
            +L+ + L  N+ +  P+ +  +  L+ +++ SNQ+ S+ P  +  +T LS L +  N+L
Sbjct: 498 TRLQSIILSFNRFKHFPDVLYTIPNLETILISSNQIGSIDPIQLKKMTKLSTLDLQNNDL 557

Query: 508 QSIPEEIGTLENLHTLYLNDNTCLN 532
             IP  +G  E+L  L+L  N   N
Sbjct: 558 LQIPPALGNCESLRALHLEGNPFRN 582



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 130/538 (24%), Positives = 241/538 (44%), Gaps = 59/538 (10%)

Query: 75  PKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGN 134
           P P +  + P + +  +    ++   ++   L+LS   +T +P SV ++        + N
Sbjct: 11  PDPLSGFRAPKEQESAVPFGLIKAARKSG-QLNLSARGLTEVPVSVWRINVDTPPEAHQN 69

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
                  +    T+LT L LA N L +L + ++ L  L VLD+  N++  LP  + +LT+
Sbjct: 70  VDFGGSDRWWEQTDLTKLILASNKLQALSEDISLLPALVVLDIHDNQIASLPCAIRELTN 129

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L+ L +  N+IK +  ++Q+L NL    ++ N++ ELP  +G L  L  LD+++N L  +
Sbjct: 130 LQKLNISHNKIKQLPNELQHLQNLKSFLLQHNQLEELPDSIGHLSILEELDVSNNCLRSV 189

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
              +G  T LV  +L  N+L  +P  +G + NL +L  + N LE+VP +++    L +  
Sbjct: 190 SSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLRQLDCTSNLLENVPASVAGMESLEQLY 249

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +    L+ LP+  L  LT +  + +  N+            +S+  +   +N++  +P  
Sbjct: 250 LRQNKLTYLPE--LPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPKE 307

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN---------- 424
           I S  K L ++++ +N + SLP  LG+   L  L L  N +  +  DI N          
Sbjct: 308 I-SLLKGLERLDLSNNDIGSLPDTLGSLPNLKSLQLDGNPLRGIRRDILNKGTQELLKYL 366

Query: 425 ----------------------------------LVNLEVLVLSNNLLKKLPSSIGNLRK 450
                                             ++ L+ L         +P ++ N   
Sbjct: 367 KGRVQTPDMTTQEAANPPDTAMTLPSDSVINAHAIMTLKTLEYCEKQASLIPEAVFNAAA 426

Query: 451 ---LKCLDLEENKLESLPNEIGFLKE-LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
              +  ++  +N+L  +P  I  +K+ +  + L  N++ S+   +  L  L++L +  N 
Sbjct: 427 SSPITTVNFSKNQLTEVPARIVEMKDSVYDVNLGFNKISSISLNLCMLLKLTHLDMRNNA 486

Query: 507 LQSIPEEIGTLENLHTLYLNDN------TCLNNIP-FELALCSNLQIMSLDNCPLSQI 557
           L S+P E+  L  L ++ L+ N        L  IP  E  L S+ QI S+D   L ++
Sbjct: 487 LASLPPEMEALTRLQSIILSFNRFKHFPDVLYTIPNLETILISSNQIGSIDPIQLKKM 544



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 1/132 (0%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C    + +LD+  +++  LPP +E LT L+ + L  N+    P  +  + NL  + ++ N
Sbjct: 472 CMLLKLTHLDMRNNALASLPPEMEALTRLQSIILSFNRFKHFPDVLYTIPNLETILISSN 531

Query: 158 SLTSL-PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
            + S+ P  L  + +L  LDL++N L ++P  +    SL+ L+L  N  +     I    
Sbjct: 532 QIGSIDPIQLKKMTKLSTLDLQNNDLLQIPPALGNCESLRALHLEGNPFRNPRATILAKG 591

Query: 217 NLSMLSMRDNKI 228
            +++L    ++I
Sbjct: 592 TVAILEYLRSRI 603


>gi|359484864|ref|XP_002273966.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g08850-like [Vitis vinifera]
          Length = 1091

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 164/497 (32%), Positives = 261/497 (52%), Gaps = 28/497 (5%)

Query: 105 NLDLSKSSITH-LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS- 161
           +L+LS ++++  +PPS+  L +L  LYL+ NKL  S+P +IG + +L  L L+ N+L   
Sbjct: 198 DLELSANNLSGPIPPSIGNLRNLTTLYLHTNKLSGSIPQEIGLLRSLNDLELSTNNLNGP 257

Query: 162 LPDSLANLQQLRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKT-VHPDIQYLSNLS 219
           +P S+ NL+ L  L L  NKL+  +P  +  L SL  L L  N +   + P I  L NL+
Sbjct: 258 IPPSIGNLRNLTTLYLHTNKLSGSIPKEIGMLRSLNDLELSTNNLNGPIPPSIGKLRNLT 317

Query: 220 MLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLEE-LPKEIGNCTMLVTLDLQHNELV-N 276
            L + +NK+   +P E+G L++L  L L+ N+L   +P  IGN   L  L L +N    +
Sbjct: 318 TLYLHNNKLSGSIPLEIGLLRSLFNLSLSTNNLSGPIPPFIGNLRNLTKLYLDNNRFSGS 377

Query: 277 IPDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSS-LPDGLLSSLTSI 334
           IP  +G L +L  L L+ N+L   +P+ +   +HL   ++E    +  LP  +     ++
Sbjct: 378 IPREIGLLRSLHDLALATNKLSGPIPQEIDNLIHLKSLHLEENNFTGHLPQQMCLG-GAL 436

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK-DNLLT 393
            N T   N FT          TS++ +  E NQ++     +F    NL+ +++  +NL  
Sbjct: 437 ENFTAMGNHFTGPIPMSLRNCTSLFRVRLERNQLEGNITEVFGVYPNLNFMDLSSNNLYG 496

Query: 394 SLPLDLGTWVGLTELNLGTNQIS-----KLSEDIQNLVNLEVLVLS-NNLLKKLPSSIGN 447
            L    G    LT LN+  N +S     +L E IQ    L  L LS N+LL K+P  +G 
Sbjct: 497 ELSHKWGQCGSLTSLNISHNNLSGIIPPQLGEAIQ----LHRLDLSSNHLLGKIPRELGK 552

Query: 448 LRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGEN 505
           L  +  L L  N+L   +P E+G L  L+ L L SN L  S+P+ +G L+ L +L++ +N
Sbjct: 553 LTSMFHLVLSNNQLSGNIPLEVGNLFNLEHLSLTSNNLSGSIPKQLGMLSKLFFLNLSKN 612

Query: 506 NL-QSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS-QIPS--EI 561
              +SIP+EIG + +L  L L+ N     IP +L     L+ ++L +  LS  IPS  E 
Sbjct: 613 KFGESIPDEIGNMHSLQNLDLSQNMLNGKIPQQLGELQRLETLNLSHNELSGSIPSTFED 672

Query: 562 VVGGPSLIIRYLKMQGP 578
           ++   S+ I   +++GP
Sbjct: 673 MLSLTSVDISSNQLEGP 689



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 220/494 (44%), Gaps = 82/494 (16%)

Query: 105 NLDLSKSSITH-LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS- 161
           NL LS ++++  +PPS+  L +L  LYL+ NKL  S+P +IG + +L  L L+ N+L+  
Sbjct: 150 NLKLSTNNLSGPIPPSIGNLRNLTTLYLHTNKLSGSIPQEIGLLRSLNDLELSANNLSGP 209

Query: 162 LPDSLANLQQLRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKT-VHPDIQYLSNLS 219
           +P S+ NL+ L  L L  NKL+  +P  +  L SL  L L  N +   + P I  L NL+
Sbjct: 210 IPPSIGNLRNLTTLYLHTNKLSGSIPQEIGLLRSLNDLELSTNNLNGPIPPSIGNLRNLT 269

Query: 220 MLSMRDNKIRE-------------------------LPPELGELKNLVTLDLAHNHLE-E 253
            L +  NK+                           +PP +G+L+NL TL L +N L   
Sbjct: 270 TLYLHTNKLSGSIPKEIGMLRSLNDLELSTNNLNGPIPPSIGKLRNLTTLYLHNNKLSGS 329

Query: 254 LPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLN 311
           +P EIG    L  L L  N L   IP  +GNL NLT+L L  NR   S+P  +     L+
Sbjct: 330 IPLEIGLLRSLFNLSLSTNNLSGPIPPFIGNLRNLTKLYLDNNRFSGSIPREIGLLRSLH 389

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
           +  +    LS      + +L  + ++ L  N FT +    P Q                 
Sbjct: 390 DLALATNKLSGPIPQEIDNLIHLKSLHLEENNFTGHL---PQQMC--------------- 431

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI-SKLSEDIQNLVNLEV 430
              +    +N +   M ++    +P+ L     L  + L  NQ+   ++E      NL  
Sbjct: 432 ---LGGALENFTA--MGNHFTGPIPMSLRNCTSLFRVRLERNQLEGNITEVFGVYPNLNF 486

Query: 431 LVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLESL-PNEIGFLKELQRLILQSNQLVSLP 488
           + LS NNL  +L    G    L  L++  N L  + P ++G   +L RL L SN L    
Sbjct: 487 MDLSSNNLYGELSHKWGQCGSLTSLNISHNNLSGIIPPQLGEAIQLHRLDLSSNHL---- 542

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMS 548
                             L  IP E+G L ++  L L++N    NIP E+    NL+ +S
Sbjct: 543 ------------------LGKIPRELGKLTSMFHLVLSNNQLSGNIPLEVGNLFNLEHLS 584

Query: 549 LDNCPLS-QIPSEI 561
           L +  LS  IP ++
Sbjct: 585 LTSNNLSGSIPKQL 598



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 187/395 (47%), Gaps = 44/395 (11%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
           +PPS+ KL +L  LYL+ NKL  S+P +IG + +L  L L+ N+L+  +P  + NL+ L 
Sbjct: 306 IPPSIGKLRNLTTLYLHNNKLSGSIPLEIGLLRSLFNLSLSTNNLSGPIPPFIGNLRNLT 365

Query: 174 VLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSMLSMRDNKIR-E 230
            L L +N+ +  +P  +  L SL  L L  N++    P +I  L +L  L + +N     
Sbjct: 366 KLYLDNNRFSGSIPREIGLLRSLHDLALATNKLSGPIPQEIDNLIHLKSLHLEENNFTGH 425

Query: 231 LPPEL---GELKNLVTLDLAHNHLEE-LPKEIGNCTMLVTLDLQHNEL-VNIPDMLGNLI 285
           LP ++   G L+N   +    NH    +P  + NCT L  + L+ N+L  NI ++ G   
Sbjct: 426 LPQQMCLGGALENFTAMG---NHFTGPIPMSLRNCTSLFRVRLERNQLEGNITEVFGVYP 482

Query: 286 NLTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
           NL  + LS N L   +     +C  L   N+    LS +    L     ++ + LS N  
Sbjct: 483 NLNFMDLSSNNLYGELSHKWGQCGSLTSLNISHNNLSGIIPPQLGEAIQLHRLDLSSNHL 542

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDK-IPYGIFSRAKNLSKVNM-KDNLLTSLPLDLGTW 402
                    + TS++ +   +NQ+   IP  +     NL  +++  +NL  S+P  LG  
Sbjct: 543 LGKIPRELGKLTSMFHLVLSNNQLSGNIPLEV-GNLFNLEHLSLTSNNLSGSIPKQLGML 601

Query: 403 VGLTELNLGTNQISK-LSEDIQNLVNLEVLVLSNNLL-KKLPSSIGNLRKLKCL------ 454
             L  LNL  N+  + + ++I N+ +L+ L LS N+L  K+P  +G L++L+ L      
Sbjct: 602 SKLFFLNLSKNKFGESIPDEIGNMHSLQNLDLSQNMLNGKIPQQLGELQRLETLNLSHNE 661

Query: 455 ------------------DLEENKLES-LPNEIGF 470
                             D+  N+LE  LP+   F
Sbjct: 662 LSGSIPSTFEDMLSLTSVDISSNQLEGPLPDIKAF 696


>gi|218186058|gb|EEC68485.1| hypothetical protein OsI_36738 [Oryza sativa Indica Group]
          Length = 1080

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 160/514 (31%), Positives = 258/514 (50%), Gaps = 49/514 (9%)

Query: 96  LRCKEEN---ILNLDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLT 150
           + C  +N   +++L+L   ++T  + P + +L+ L  +++  N+L   +   IG +T L 
Sbjct: 44  VTCSRQNASQVISLNLESLNLTGQIFPCIAQLSFLARIHMPNNQLNGHISPDIGLLTRLR 103

Query: 151 CLGLAENSLTS-LPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTV 208
            L L+ NSL   +P ++++   L+V+ L++N L  E+P  + + + L+ + L  N ++  
Sbjct: 104 YLNLSMNSLNGVIPYAISSCSHLKVISLQNNSLEGEIPQSLAQCSFLQQIVLSNNNLQGS 163

Query: 209 HPD-IQYLSNLSMLSMRDNKIRELPPEL-GELKNLVTLDLAHNHLE-ELPKEIGNCTMLV 265
            P     LSNLS++ +  NK+  + PEL G  K+L  ++L +N +  E+P  + N T L 
Sbjct: 164 IPSKFGLLSNLSVILLSSNKLTGMIPELLGGSKSLTQVNLKNNSISGEIPPTLFNSTTLS 223

Query: 266 TLDLQHNELVN-------------------------IPDMLGNLINLTRLRLSYNRLE-S 299
            +DL  N L                           IP  +GN+  L+ L L+ N L+ S
Sbjct: 224 YIDLSRNHLSGSIPPFSQTSLPLRFLSLTENNLTGEIPPSIGNISTLSFLLLTQNNLQGS 283

Query: 300 VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA-YPSGGPTQFTSV 358
           +P++LSK  +L   N++   LS      L +++S+ N+ LS NK     P+       ++
Sbjct: 284 IPDSLSKLTNLRVLNLKYNKLSGTVPLALFNVSSLTNLILSNNKLVGTIPANIGVTLPNI 343

Query: 359 YSINFEHNQID-KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
             +    NQ + +IP  + + + NL  ++++ N  T     LG    L  L+LGTN++  
Sbjct: 344 IELIIGGNQFEGQIPNSL-ANSTNLQNLDIRSNSFTGDIPSLGLLSNLKILDLGTNRLQA 402

Query: 418 ----LSEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRK-LKCLDLEENKLES-LPNEIGF 470
                   + N   L++L L  N    K+PSSIGNL + LK L L EN+L   +P+EIG 
Sbjct: 403 GDWTFFSSLTNCTQLQMLCLDFNGFEGKIPSSIGNLSQNLKILLLTENQLTGDIPSEIGK 462

Query: 471 LKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDN 528
           L  L  L LQSN L   +P  IG L NLS LS+ +N L   IP+ +G LE L  LYL +N
Sbjct: 463 LTSLTALSLQSNNLTGHIPDTIGDLQNLSVLSLAKNKLSGEIPQSMGKLEQLTILYLMEN 522

Query: 529 TCLNNIPFELALCSNLQIMSL-DNCPLSQIPSEI 561
                IP  L  C  L  ++L  N     IP E+
Sbjct: 523 GLTGRIPATLDGCKYLLELNLSSNSFYGSIPYEL 556



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 145/485 (29%), Positives = 246/485 (50%), Gaps = 57/485 (11%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTSL-PDSLANLQQLR 173
           +P S+ + + L+++ L  N L  S+PS+ G ++NL+ + L+ N LT + P+ L   + L 
Sbjct: 140 IPQSLAQCSFLQQIVLSNNNLQGSIPSKFGLLSNLSVILLSSNKLTGMIPELLGGSKSLT 199

Query: 174 VLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIK-TVHPDIQYLSNLSMLSMRDNKIR-E 230
            ++L++N ++ E+P  ++  T+L  + L  N +  ++ P  Q    L  LS+ +N +  E
Sbjct: 200 QVNLKNNSISGEIPPTLFNSTTLSYIDLSRNHLSGSIPPFSQTSLPLRFLSLTENNLTGE 259

Query: 231 LPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLT 288
           +PP +G +  L  L L  N+L+  +P  +   T L  L+L++N+L   +P  L N+ +LT
Sbjct: 260 IPPSIGNISTLSFLLLTQNNLQGSIPDSLSKLTNLRVLNLKYNKLSGTVPLALFNVSSLT 319

Query: 289 RLRLSYNRLE---------SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            L LS N+L          ++P  +   +  N+F  EG     +P+ L +S T++ N+ +
Sbjct: 320 NLILSNNKLVGTIPANIGVTLPNIIELIIGGNQF--EG----QIPNSLANS-TNLQNLDI 372

Query: 340 SRNKFTA-YPS-------------------GGPTQFTSVYSIN------FEHNQID-KIP 372
             N FT   PS                   G  T F+S+ +         + N  + KIP
Sbjct: 373 RSNSFTGDIPSLGLLSNLKILDLGTNRLQAGDWTFFSSLTNCTQLQMLCLDFNGFEGKIP 432

Query: 373 YGIFSRAKNLSKVNMKDNLLTS-LPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEV 430
             I + ++NL  + + +N LT  +P ++G    LT L+L +N ++  + + I +L NL V
Sbjct: 433 SSIGNLSQNLKILLLTENQLTGDIPSEIGKLTSLTALSLQSNNLTGHIPDTIGDLQNLSV 492

Query: 431 LVLSNNLLK-KLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQLV-SL 487
           L L+ N L  ++P S+G L +L  L L EN L   +P  +   K L  L L SN    S+
Sbjct: 493 LSLAKNKLSGEIPQSMGKLEQLTILYLMENGLTGRIPATLDGCKYLLELNLSSNSFYGSI 552

Query: 488 PRAIGHLTNLSY-LSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
           P  +  ++ LS  L +  N L   IP EIG L NL++L +++N     IP  L  C  LQ
Sbjct: 553 PYELFSISTLSIGLDLSNNQLTGNIPLEIGKLINLNSLSISNNRLSGEIPSTLGDCQYLQ 612

Query: 546 IMSLD 550
            + L+
Sbjct: 613 SLHLE 617



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 236/485 (48%), Gaps = 53/485 (10%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLT-SL 162
           +DLS++ ++  +PP  +    L  L L  N L   +P  IG ++ L+ L L +N+L  S+
Sbjct: 225 IDLSRNHLSGSIPPFSQTSLPLRFLSLTENNLTGEIPPSIGNISTLSFLLLTQNNLQGSI 284

Query: 163 PDSLANLQQLRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNR--------IKTVHPDIQ 213
           PDSL+ L  LRVL+L++NKL+  +P+ ++ ++SL  L L  N+        I    P+I 
Sbjct: 285 PDSLSKLTNLRVLNLKYNKLSGTVPLALFNVSSLTNLILSNNKLVGTIPANIGVTLPNII 344

Query: 214 YL------------------SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE-- 253
            L                  +NL  L +R N      P LG L NL  LDL  N L+   
Sbjct: 345 ELIIGGNQFEGQIPNSLANSTNLQNLDIRSNSFTGDIPSLGLLSNLKILDLGTNRLQAGD 404

Query: 254 --LPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLI-NLTRLRLSYNRLES-VPETLSKCV 308
                 + NCT L  L L  N     IP  +GNL  NL  L L+ N+L   +P  + K  
Sbjct: 405 WTFFSSLTNCTQLQMLCLDFNGFEGKIPSSIGNLSQNLKILLLTENQLTGDIPSEIGKLT 464

Query: 309 HLNEFNVEGCALSS-LPDGLLSSLTSINNITLSRNKFTA---YPSGGPTQFTSVYSINFE 364
            L   +++   L+  +PD  +  L +++ ++L++NK +       G   Q T +Y +  E
Sbjct: 465 SLTALSLQSNNLTGHIPD-TIGDLQNLSVLSLAKNKLSGEIPQSMGKLEQLTILYLM--E 521

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDN-LLTSLPLDLGTWVGLT-ELNLGTNQISK-LSED 421
           +    +IP       K L ++N+  N    S+P +L +   L+  L+L  NQ++  +  +
Sbjct: 522 NGLTGRIP-ATLDGCKYLLELNLSSNSFYGSIPYELFSISTLSIGLDLSNNQLTGNIPLE 580

Query: 422 IQNLVNLEVLVLSNNLLK-KLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLIL 479
           I  L+NL  L +SNN L  ++PS++G+ + L+ L LE N LE S+P     L+ L  + L
Sbjct: 581 IGKLINLNSLSISNNRLSGEIPSTLGDCQYLQSLHLEANFLEGSIPRSFINLRGLIEMDL 640

Query: 480 QSNQLVS-LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL--NDNTCLNNIPF 536
             N L   +P   G  ++L  L++  N+L       G  EN   +++  ND  C +   F
Sbjct: 641 SQNNLTGEIPDFFGSFSSLMVLNLSFNDLNGKVPNGGVFENSSAVFMKGNDKLCASFPMF 700

Query: 537 ELALC 541
           +L LC
Sbjct: 701 QLPLC 705



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 15/171 (8%)

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
           +W G+T      +Q+  L        NLE L    NL  ++   I  L  L  + +  N+
Sbjct: 40  SWHGVTCSRQNASQVISL--------NLESL----NLTGQIFPCIAQLSFLARIHMPNNQ 87

Query: 461 LES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTL 517
           L   +  +IG L  L+ L L  N L   +P AI   ++L  +S+  N+L+  IP+ +   
Sbjct: 88  LNGHISPDIGLLTRLRYLNLSMNSLNGVIPYAISSCSHLKVISLQNNSLEGEIPQSLAQC 147

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSL 568
             L  + L++N    +IP +  L SNL ++ L +  L+ +  E++ G  SL
Sbjct: 148 SFLQQIVLSNNNLQGSIPSKFGLLSNLSVILLSSNKLTGMIPELLGGSKSL 198


>gi|417770632|ref|ZP_12418538.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680646|ref|ZP_13241890.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327590|gb|EJO79835.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409947404|gb|EKN97402.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665927|gb|EMF31409.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 333

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 108/297 (36%), Positives = 164/297 (55%), Gaps = 26/297 (8%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++ +L++   K+  LP E+ +L+NL +LDLA+N  + LPKEIG    L  L+L +N+L N
Sbjct: 49  DVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKN 108

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  +G L NL  L LS NRL + P+ + +  +L + N++   L++L   +   L S+  
Sbjct: 109 LPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEI-GQLQSLQK 167

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L +N+  A P                 N+I ++        +NL ++ + +N LT LP
Sbjct: 168 LNLDKNRLKALP-----------------NEIGQL--------QNLQELYLSNNQLTILP 202

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G    L  L LG NQ++ L ++I  L NL++L   NN L  LP  IG L  L+ L L
Sbjct: 203 EEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTTLPKEIGQLENLQELYL 262

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
            +N+L +LP EIG LK LQ  I  +NQL  LP+ IG L NL +L +  N L S  EE
Sbjct: 263 NDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLSSQEEE 319



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/276 (35%), Positives = 153/276 (55%), Gaps = 3/276 (1%)

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
           +L K + N   +  L+L   +L  +P  +  L NL  L L+ N+ +++P+ + +  +L E
Sbjct: 39  DLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQE 98

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            N+    L +LP  +   L ++  + LS N+ T +P     Q  ++  +N ++NQ+  + 
Sbjct: 99  LNLWNNQLKNLPKEI-GQLQNLQTLILSVNRLTTFPQE-IGQLKNLQKLNLDYNQLTTLL 156

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + ++L K+N+  N L +LP ++G    L EL L  NQ++ L E+I  L NL+ L+
Sbjct: 157 QEI-GQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALI 215

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L +N L  LP  IG L+ LK L    N+L +LP EIG L+ LQ L L  NQL +LP+ IG
Sbjct: 216 LGDNQLTILPKEIGQLQNLKLLYSVNNELTTLPKEIGQLENLQELYLNDNQLTTLPKEIG 275

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
            L NL       N L  +P+EIG L+NL  L LN+N
Sbjct: 276 QLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNN 311



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/249 (38%), Positives = 139/249 (55%), Gaps = 4/249 (1%)

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
            N+    L++LP  +   L ++ ++ L+ N+F   P     Q  ++  +N  +NQ+  +P
Sbjct: 53  LNLSSQKLTTLPKEI-KQLQNLKSLDLANNQFKTLPKE-IGQLQNLQELNLWNNQLKNLP 110

Query: 373 YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
             I  + +NL  + +  N LT+ P ++G    L +LNL  NQ++ L ++I  L +L+ L 
Sbjct: 111 KEI-GQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLN 169

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           L  N LK LP+ IG L+ L+ L L  N+L  LP EIG LK LQ LIL  NQL  LP+ IG
Sbjct: 170 LDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIG 229

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L NL  L    N L ++P+EIG LENL  LYLNDN  L  +P E+    NLQ     N 
Sbjct: 230 QLQNLKLLYSVNNELTTLPKEIGQLENLQELYLNDNQ-LTTLPKEIGQLKNLQTFISFNN 288

Query: 553 PLSQIPSEI 561
            L+ +P EI
Sbjct: 289 QLTMLPQEI 297



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 163/325 (50%), Gaps = 34/325 (10%)

Query: 145 YVTNLTCLGLAE----NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
           ++  L+C   AE     +   L  +L N   +RVL+L   KL  LP  + +L +LK L L
Sbjct: 19  FLIYLSCEIQAEKIKPGTYRDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDL 78

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
             N+ KT+  +I  L NL  L++ +N+++ LP E+G+L+NL TL L+ N L   P+EIG 
Sbjct: 79  ANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQ 138

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
              L  L+L +N+L  +   +G L +L +L L  NRL+++P  + +  +L E  +    L
Sbjct: 139 LKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQL 198

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
           + LP+  +  L ++  + L  N+ T  P   G       +YS+N E              
Sbjct: 199 TILPEE-IGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNE-------------- 243

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
                        LT+LP ++G    L EL L  NQ++ L ++I  L NL+  +  NN L
Sbjct: 244 -------------LTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQL 290

Query: 439 KKLPSSIGNLRKLKCLDLEENKLES 463
             LP  IG L+ L+ L L  N+L S
Sbjct: 291 TMLPQEIGQLQNLQWLKLNNNQLSS 315



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 141/246 (57%), Gaps = 1/246 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +LDL+ +    LP  + +L +L+EL L+ N+L +LP +IG + NL  L L+ N LT
Sbjct: 71  QNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLT 130

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           + P  +  L+ L+ L+L +N+L  L   + +L SL+ L L  NR+K +  +I  L NL  
Sbjct: 131 TFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQE 190

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++  LP E+G+LKNL  L L  N L  LPKEIG    L  L   +NEL  +P  
Sbjct: 191 LYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTTLPKE 250

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L+ N+L ++P+ + +  +L  F      L+ LP   +  L ++  + L+
Sbjct: 251 IGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQE-IGQLQNLQWLKLN 309

Query: 341 RNKFTA 346
            N+ ++
Sbjct: 310 NNQLSS 315



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/236 (34%), Positives = 131/236 (55%), Gaps = 5/236 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L+LS   +T LP  +++L +L+ L L  N+  +LP +IG + NL  L L  N L +LP  
Sbjct: 53  LNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKE 112

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ L L  N+L   P  + +L +L+ L L +N++ T+  +I  L +L  L++  
Sbjct: 113 IGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDK 172

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+++ LP E+G+L+NL  L L++N L  LP+EIG    L  L L  N+L  +P  +G L 
Sbjct: 173 NRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQ 232

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL-----LSSLTSINN 336
           NL  L    N L ++P+ + +  +L E  +    L++LP  +     L +  S NN
Sbjct: 233 NLKLLYSVNNELTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNN 288



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 1/123 (0%)

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
           + L  ++ N   ++ L+L   KL +LP EI  L+ L+ L L +NQ  +LP+ IG L NL 
Sbjct: 38  RDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQ 97

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L++  N L+++P+EIG L+NL TL L+ N  L   P E+    NLQ ++LD   L+ + 
Sbjct: 98  ELNLWNNQLKNLPKEIGQLQNLQTLILSVNR-LTTFPQEIGQLKNLQKLNLDYNQLTTLL 156

Query: 559 SEI 561
            EI
Sbjct: 157 QEI 159


>gi|449487618|ref|XP_004157716.1| PREDICTED: receptor-like protein kinase 2-like [Cucumis sativus]
          Length = 1121

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 144/446 (32%), Positives = 218/446 (48%), Gaps = 37/446 (8%)

Query: 115 HLPPSVEKLTHLEELYLYGNK--LASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQ 171
            LPP + KL +LE L   GNK     +P + G  + L  LGLA+  ++  LP SL  L+ 
Sbjct: 188 FLPPDIGKLENLEVLRAGGNKEITGEIPPEFGNCSKLALLGLADTRISGRLPSSLGKLKN 247

Query: 172 LRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           LR L +    L  E+P  +   + L  LYL  NR+                         
Sbjct: 248 LRTLSIYTTLLSGEIPSDLGNCSELVDLYLYENRLSG----------------------S 285

Query: 231 LPPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLT 288
           +PP++G+LK L  L L  N+L   +PKEIGNC+ L  +D   N L   +P  LG L  L 
Sbjct: 286 IPPQIGDLKKLEQLFLWQNNLIGAIPKEIGNCSSLRRIDFSLNYLSGTLPLTLGKLSKLE 345

Query: 289 RLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
              +S N +  S+P +LS   +L +   +   +S L    L +L+ +  +   +N+    
Sbjct: 346 EFMISDNNVSGSIPSSLSDAKNLLQLQFDNNQISGLIPPELGTLSKLTVLLAWQNQLEGS 405

Query: 348 PSGGPTQFTSVYSINFEHNQIDK-IPYGIFSRAKNLSKVNMKDNLLTS-LPLDLGTWVGL 405
                   +S+ +I+  HN +   IP G+F + +NLSK+ +  N ++  +P ++G    L
Sbjct: 406 IPESLEGCSSLEAIDLSHNSLTGVIPSGLF-QLRNLSKLLLISNDISGPIPPEIGNGSSL 464

Query: 406 TELNLGTNQISK-LSEDIQNLVNLEVLVLSNNLLKK-LPSSIGNLRKLKCLDLEENKLES 463
             L LG N+I+  +   I  L +L+ L LS N +   LP  IGN ++L+ +DL  N LE 
Sbjct: 465 VRLRLGNNRITGGIPRTIGRLSSLDFLDLSGNRISGPLPDEIGNCKELQMIDLSYNALEG 524

Query: 464 -LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTLENL 520
            LPN +  L ELQ   + SN+ +  LP + G L +L+ L +  N L  SIP  +G    L
Sbjct: 525 PLPNSLASLSELQVFDVSSNRFLGELPGSFGSLVSLNKLVLRANLLSGSIPPSLGLCSGL 584

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQI 546
             L L++N    NIP EL     L+I
Sbjct: 585 QRLDLSNNHFTGNIPVELGQLDGLEI 610



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 192/433 (44%), Gaps = 63/433 (14%)

Query: 115 HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLT-SLPDSLANLQQL 172
            +P  +   + L +LYLY N+L  S+P QIG +  L  L L +N+L  ++P  + N   L
Sbjct: 261 EIPSDLGNCSELVDLYLYENRLSGSIPPQIGDLKKLEQLFLWQNNLIGAIPKEIGNCSSL 320

Query: 173 RVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIRE 230
           R +D   N L   LP+ + KL+ L+   +  N +    P  +    NL  L   +N+I  
Sbjct: 321 RRIDFSLNYLSGTLPLTLGKLSKLEEFMISDNNVSGSIPSSLSDAKNLLQLQFDNNQISG 380

Query: 231 L-PPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN------------ 276
           L PPELG L  L  L    N LE  +P+ +  C+ L  +DL HN L              
Sbjct: 381 LIPPELGTLSKLTVLLAWQNQLEGSIPESLEGCSSLEAIDLSHNSLTGVIPSGLFQLRNL 440

Query: 277 -------------IPDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSS 322
                        IP  +GN  +L RLRL  NR+   +P T+ +   L+  ++ G  +S 
Sbjct: 441 SKLLLISNDISGPIPPEIGNGSSLVRLRLGNNRITGGIPRTIGRLSSLDFLDLSGNRISG 500

Query: 323 -LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQ-IDKIPYGIFSRAK 380
            LPD +  +   +  I LS N             + +   +   N+ + ++P G F    
Sbjct: 501 PLPDEI-GNCKELQMIDLSYNALEGPLPNSLASLSELQVFDVSSNRFLGELP-GSFGSLV 558

Query: 381 NLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQISK-LSEDIQNLVNLEV-LVLSNN- 436
           +L+K+ ++ NLL+ S+P  LG   GL  L+L  N  +  +  ++  L  LE+ L LSNN 
Sbjct: 559 SLNKLVLRANLLSGSIPPSLGLCSGLQRLDLSNNHFTGNIPVELGQLDGLEIALNLSNNE 618

Query: 437 LLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
           L   +P  +  L KL  LDL  N LE      G LK L                   L+N
Sbjct: 619 LYGPIPPQMSALTKLSVLDLSRNNLE------GDLKPLA-----------------GLSN 655

Query: 497 LSYLSVGENNLQS 509
           L  L++  NN   
Sbjct: 656 LVSLNISYNNFSG 668



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 196/462 (42%), Gaps = 64/462 (13%)

Query: 116 LPPSVEKLTHLEELYLYG-NKLASLPSQIGYVTNLTCLGLAENSLT-SLPDSLANLQQLR 173
           LP ++     L++L + G N    +P  IG  T L  L L+ N+L  S+P S+ NL++L 
Sbjct: 93  LPSNLSSFRFLQKLVVSGANVTGKIPDDIGNCTELVVLDLSFNNLVGSIPGSIGNLRKLE 152

Query: 174 VLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKT-VHPDIQYLSNLSMLSMRDNK--IR 229
            L L  N+L   +P  +   +SLK L++  N +   + PDI  L NL +L    NK    
Sbjct: 153 DLILNGNQLTGSIPAELGFCSSLKNLFIFDNLLSGFLPPDIGKLENLEVLRAGGNKEITG 212

Query: 230 ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINL 287
           E+PPE G    L  L LA   +   LP  +G    L TL +    L   IP  LGN   L
Sbjct: 213 EIPPEFGNCSKLALLGLADTRISGRLPSSLGKLKNLRTLSIYTTLLSGEIPSDLGNCSEL 272

Query: 288 TRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
             L L  NRL  S+P  +     L +  +                               
Sbjct: 273 VDLYLYENRLSGSIPPQIGDLKKLEQLFL------------------------------- 301

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGL 405
                           +++N I  IP  I     +L +++   N L+ +LPL LG    L
Sbjct: 302 ----------------WQNNLIGAIPKEI-GNCSSLRRIDFSLNYLSGTLPLTLGKLSKL 344

Query: 406 TELNLGTNQIS-KLSEDIQNLVNLEVLVLSNNLLKKL-PSSIGNLRKLKCLDLEENKLE- 462
            E  +  N +S  +   + +  NL  L   NN +  L P  +G L KL  L   +N+LE 
Sbjct: 345 EEFMISDNNVSGSIPSSLSDAKNLLQLQFDNNQISGLIPPELGTLSKLTVLLAWQNQLEG 404

Query: 463 SLPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENL 520
           S+P  +     L+ + L  N L   +P  +  L NLS L +  N++   IP EIG   +L
Sbjct: 405 SIPESLEGCSSLEAIDLSHNSLTGVIPSGLFQLRNLSKLLLISNDISGPIPPEIGNGSSL 464

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ-IPSEI 561
             L L +N     IP  +   S+L  + L    +S  +P EI
Sbjct: 465 VRLRLGNNRITGGIPRTIGRLSSLDFLDLSGNRISGPLPDEI 506



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 110/206 (53%), Gaps = 8/206 (3%)

Query: 102 NILNLDLSKSSITH-LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSL 159
           +++ L L  + IT  +P ++ +L+ L+ L L GN+++  LP +IG    L  + L+ N+L
Sbjct: 463 SLVRLRLGNNRITGGIPRTIGRLSSLDFLDLSGNRISGPLPDEIGNCKELQMIDLSYNAL 522

Query: 160 TS-LPDSLANLQQLRVLDLRHNK-LNELPMVVYKLTSLKILYLRFNRIK-TVHPDIQYLS 216
              LP+SLA+L +L+V D+  N+ L ELP     L SL  L LR N +  ++ P +   S
Sbjct: 523 EGPLPNSLASLSELQVFDVSSNRFLGELPGSFGSLVSLNKLVLRANLLSGSIPPSLGLCS 582

Query: 217 NLSMLSMRDNKIR-ELPPELGELKNL-VTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNE 273
            L  L + +N     +P ELG+L  L + L+L++N L   +P ++   T L  LDL  N 
Sbjct: 583 GLQRLDLSNNHFTGNIPVELGQLDGLEIALNLSNNELYGPIPPQMSALTKLSVLDLSRNN 642

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLES 299
           L      L  L NL  L +SYN    
Sbjct: 643 LEGDLKPLAGLSNLVSLNISYNNFSG 668


>gi|359751213|emb|CCF03509.1| receptor kinase [Arabidopsis lyrata]
          Length = 1162

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 163/486 (33%), Positives = 242/486 (49%), Gaps = 51/486 (10%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-L 162
           LDL+ ++ T  +P  + KLT L EL LY N    S+PS+I  + NL  L L  N LT  +
Sbjct: 101 LDLTSNNFTGEIPAEIGKLTELNELSLYLNYFSGSIPSEIWELKNLMSLDLRNNLLTGDV 160

Query: 163 PDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSM 220
           P ++   + L V+ + +N L   +P  +  L  L++     NR+    P  +  L NL+ 
Sbjct: 161 PKAICKTRTLVVVGVGNNNLTGNIPDCLGDLVHLEVFVADINRLSGSIPVSVGTLVNLTN 220

Query: 221 LSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-I 277
           L +  N++   +P E+G L N+  L L  N LE E+P EIGNCT L+ L+L  N+L   I
Sbjct: 221 LDLSGNQLTGRIPREIGNLLNIQALVLFDNLLEGEIPAEIGNCTTLIDLELYGNQLTGRI 280

Query: 278 PDMLGNLINLTRLRLSYNRL-ESVPETLSKCVHLNEFNV-EGCALSSLPDGLLSSLTSIN 335
           P  LGNL+ L  LRL  N L  S+P +L +   L    + E   +  +P+  + SL S+ 
Sbjct: 281 PAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLRYLGLSENQLVGPIPEE-IGSLKSLQ 339

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI-DKIPY--GIFSRAKNLSKVNMKDNLL 392
            +TL  N  T       T   ++  +    N I  ++P   G+ +  +NLS     DN L
Sbjct: 340 VLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGELPADLGLLTNLRNLSA---HDNHL 396

Query: 393 TS-------------------------LPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLV 426
           T                          +P  LG+ + LT L+LG N+ + ++ +DI N  
Sbjct: 397 TGPIPSSISNCTGLKLLDLSFNKMTGKIPWGLGS-LNLTALSLGPNRFTGEIPDDIFNCS 455

Query: 427 NLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQL 484
           N+E L L+ NNL   L   IG L+KL+   +  N L   +P EIG L+EL  L L SN+ 
Sbjct: 456 NMETLNLAGNNLTGTLKPLIGKLKKLRIFQVSSNSLTGKIPGEIGNLRELILLYLHSNRF 515

Query: 485 V-SLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
             ++PR I +LT L  L +  N+L+  IPEE+  +  L  L L+ N     IP   AL S
Sbjct: 516 TGTIPREISNLTLLQGLGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIP---ALFS 572

Query: 543 NLQIMS 548
            LQ ++
Sbjct: 573 KLQSLT 578



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 137/429 (31%), Positives = 204/429 (47%), Gaps = 84/429 (19%)

Query: 162 LPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           L  ++ANL  L+VLDL  N    E+P  + KLT L  L L  N          Y S    
Sbjct: 88  LSPAIANLTYLQVLDLTSNNFTGEIPAEIGKLTELNELSLYLN----------YFSG--- 134

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELV-NIP 278
                     +P E+ ELKNL++LDL +N L  ++PK I     LV + + +N L  NIP
Sbjct: 135 ---------SIPSEIWELKNLMSLDLRNNLLTGDVPKAICKTRTLVVVGVGNNNLTGNIP 185

Query: 279 DMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           D LG+L++L       NRL  S+P ++   V+L                         N+
Sbjct: 186 DCLGDLVHLEVFVADINRLSGSIPVSVGTLVNL------------------------TNL 221

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS-LP 396
            LS N+ T                        +IP  I     N+  + + DNLL   +P
Sbjct: 222 DLSGNQLTG-----------------------RIPREI-GNLLNIQALVLFDNLLEGEIP 257

Query: 397 LDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVL-SNNLLKKLPSSIGNLRKLKCL 454
            ++G    L +L L  NQ++ ++  ++ NLV LE L L  NNL   LPSS+  L +L+ L
Sbjct: 258 AEIGNCTTLIDLELYGNQLTGRIPAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLRYL 317

Query: 455 DLEENKLES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IP 511
            L EN+L   +P EIG LK LQ L L SN L    P++I +L NL+ +++G N +   +P
Sbjct: 318 GLSENQLVGPIPEEIGSLKSLQVLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGELP 377

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIR 571
            ++G L NL  L  +DN     IP  ++ C+ L+++ L     +++  +I  G  SL + 
Sbjct: 378 ADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLKLLDLS---FNKMTGKIPWGLGSLNLT 434

Query: 572 YLKMQGPYR 580
            L + GP R
Sbjct: 435 ALSL-GPNR 442



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 220/473 (46%), Gaps = 43/473 (9%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSL-TSLPDSLANLQQLR 173
           +P  +   T L +L LYGN+L   +P+++G +  L  L L  N+L +SLP SL  L +LR
Sbjct: 256 IPAEIGNCTTLIDLELYGNQLTGRIPAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLR 315

Query: 174 VLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIR-E 230
            L L  N+L   +P  +  L SL++L L  N +    P  I  L NL++++M  N I  E
Sbjct: 316 YLGLSENQLVGPIPEEIGSLKSLQVLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGE 375

Query: 231 LPPELGELKNLVTLDLAHNHLEE-LPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLT 288
           LP +LG L NL  L    NHL   +P  I NCT L  LDL  N++   IP  LG+L NLT
Sbjct: 376 LPADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLKLLDLSFNKMTGKIPWGLGSL-NLT 434

Query: 289 RLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            L L  NR    +P+ +  C ++   N+ G  L+     L+  L  +    +S N  T  
Sbjct: 435 ALSLGPNRFTGEIPDDIFNCSNMETLNLAGNNLTGTLKPLIGKLKKLRIFQVSSNSLTG- 493

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLT 406
                                 KIP G     + L  + +  N  T ++P ++     L 
Sbjct: 494 ----------------------KIP-GEIGNLRELILLYLHSNRFTGTIPREISNLTLLQ 530

Query: 407 ELNLGTNQI-SKLSEDIQNLVNLEVLVLSNNLLKK-LPSSIGNLRKLKCLDLEENKLE-S 463
            L L  N +   + E++ +++ L  L LS+N     +P+    L+ L  L L  NK   S
Sbjct: 531 GLGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIPALFSKLQSLTYLGLHGNKFNGS 590

Query: 464 LPNEIGFLKELQRLILQSNQLV-SLPRAI-GHLTNLS-YLSVGENNLQ-SIPEEIGTLEN 519
           +P  +  L  L    +  N L  ++P  +   + N+  YL+   N L  +I  E+G LE 
Sbjct: 591 IPASLKSLSLLNTFDISGNLLTGTIPEELLSSMKNMQLYLNFSNNFLTGTISNELGKLEM 650

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS-QIPSEIV-VGGPSLII 570
           +  +  ++N    +IP  L  C N+  +      LS QIP E+   GG  +II
Sbjct: 651 VQEIDFSNNLFSGSIPRSLKACKNVFTLDFSRNNLSGQIPDEVFHQGGMDMII 703



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 196/431 (45%), Gaps = 65/431 (15%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
            P S+  L +L  + +  N ++  LP+ +G +TNL  L   +N LT  +P S++N   L+
Sbjct: 352 FPQSITNLRNLTVMTMGFNYISGELPADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLK 411

Query: 174 VLDLRHNKL------------------------NELPMVVYKLTSLKILYLRFNRI-KTV 208
           +LDL  NK+                         E+P  ++  ++++ L L  N +  T+
Sbjct: 412 LLDLSFNKMTGKIPWGLGSLNLTALSLGPNRFTGEIPDDIFNCSNMETLNLAGNNLTGTL 471

Query: 209 HPDIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVT 266
            P I  L  L +  +  N +  ++P E+G L+ L+ L L  N     +P+EI N T+L  
Sbjct: 472 KPLIGKLKKLRIFQVSSNSLTGKIPGEIGNLRELILLYLHSNRFTGTIPREISNLTLLQG 531

Query: 267 LDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE-------------------------SV 300
           L L  N+L   IP+ + +++ L+ L LS N+                           S+
Sbjct: 532 LGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIPALFSKLQSLTYLGLHGNKFNGSI 591

Query: 301 PETLSKCVHLNEFNVEGCALS-SLPDGLLSSLTSIN-NITLSRNKFTAYPSGGPTQFTSV 358
           P +L     LN F++ G  L+ ++P+ LLSS+ ++   +  S N  T   S    +   V
Sbjct: 592 PASLKSLSLLNTFDISGNLLTGTIPEELLSSMKNMQLYLNFSNNFLTGTISNELGKLEMV 651

Query: 359 YSINFEHNQID-KIPYGIFSRAKNLSKVNM-KDNLLTSLPLDL---GTWVGLTELNLGTN 413
             I+F +N     IP  +    KN+  ++  ++NL   +P ++   G    +  LNL  N
Sbjct: 652 QEIDFSNNLFSGSIPRSL-KACKNVFTLDFSRNNLSGQIPDEVFHQGGMDMIISLNLSRN 710

Query: 414 QISK-LSEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
            +S  + E   NL +L  L LS NNL  ++P S+ NL  LK L L  N L+    E G  
Sbjct: 711 SLSGGIPEGFGNLTHLVSLDLSSNNLTGEIPESLVNLSTLKHLKLASNHLKGHVPETGVF 770

Query: 472 KELQRLILQSN 482
           K +    L  N
Sbjct: 771 KNINASDLMGN 781


>gi|299115332|emb|CBN74150.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
          Length = 1385

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 220/456 (48%), Gaps = 50/456 (10%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLSK  +  +   V +L  L+ L L  N+L  +   +  + +L  +    N + ++PD 
Sbjct: 326 LDLSKLDMDRVTSRVYRLDWLQRLDLSNNRLYRISPDLAGMESLVDVNFRHNRIQAIPDE 385

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L  L +L+ L L HN ++     +Y ++SL+ L L  NR+K V   +    +L +L    
Sbjct: 386 LEALTKLKHLQLGHNLISGFRGNIYLISSLETLDLGHNRLKEVPLQV---GDLQLL---- 438

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
            + RE    L  L+ LVTLD+++N L+  P ++  C  L  L L HN+L  +P ++G+  
Sbjct: 439 KRTREWEIGLRLLRELVTLDVSYNRLKTWPPQVEECRNLRDLRLDHNKLQEVPAIVGDNT 498

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            LT L LS N L+ +P T++                        SL+++  + LS NK  
Sbjct: 499 ALTNLNLSGNSLKGLPHTIN------------------------SLSALARLDLSDNKLK 534

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +         S+  +  +     K P     R  +L  + +  N LT  P  + T+  L
Sbjct: 535 TH---------SILPVGRKQ----KGP-----RLVSLEVLRLDGNRLTERPDMVETFKTL 576

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
           TEL++  N I   S D+ NL  ++ L L    L + P  IG+L KL+ LD  EN +++L 
Sbjct: 577 TELDVSNNPIKNWSLDVSNLRKMKHLRLRGVGLDRCPEGIGHLNKLESLDFSENHIDTLD 636

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
             +  L +L++L L+ N +  L   +G + +L+ L  G NNL+ I  E+     L TL +
Sbjct: 637 QSMAALFKLKKLGLRGNNIRDLGSCVGSMISLTSLDAGGNNLELISPELSRCTALETLDV 696

Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +  T +N +P  L++ + L+++   +  L  IP + 
Sbjct: 697 SGGT-INQLPDGLSMLTRLRVLRAQDNGLRAIPPDF 731



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 209/436 (47%), Gaps = 40/436 (9%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS + +  + P +  +  L ++    N++ ++P ++  +T L  L L  N ++    +
Sbjct: 349 LDLSNNRLYRISPDLAGMESLVDVNFRHNRIQAIPDELEALTKLKHLQLGHNLISGFRGN 408

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  +  L  LDL HN+L E+P+ V  L  LK       R +     ++ L  L  L +  
Sbjct: 409 IYLISSLETLDLGHNRLKEVPLQVGDLQLLK-------RTREWEIGLRLLRELVTLDVSY 461

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+++  PP++ E +NL  L L HN L+E+P  +G+ T L  L+L  N L  +P  + +L 
Sbjct: 462 NRLKTWPPQVEECRNLRDLRLDHNKLQEVPAIVGDNTALTNLNLSGNSLKGLPHTINSLS 521

Query: 286 NLTRLRLSYNRLES---VP----ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
            L RL LS N+L++   +P    +   + V L    ++G  L+  PD ++ +  ++  + 
Sbjct: 522 ALARLDLSDNKLKTHSILPVGRKQKGPRLVSLEVLRLDGNRLTERPD-MVETFKTLTELD 580

Query: 339 LSRNKFTAY-----------------------PSGGPTQFTSVYSINFEHNQIDKIPYGI 375
           +S N    +                       P G       + S++F  N ID +   +
Sbjct: 581 VSNNPIKNWSLDVSNLRKMKHLRLRGVGLDRCPEG-IGHLNKLESLDFSENHIDTLDQSM 639

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
            +  K L K+ ++ N +  L   +G+ + LT L+ G N +  +S ++     LE L +S 
Sbjct: 640 AALFK-LKKLGLRGNNIRDLGSCVGSMISLTSLDAGGNNLELISPELSRCTALETLDVSG 698

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
             + +LP  +  L +L+ L  ++N L ++P +   L  L+ L L  NQL SLP ++  LT
Sbjct: 699 GTINQLPDGLSMLTRLRVLRAQDNGLRAIPPDFQTLTALEELRLGGNQLSSLPASLITLT 758

Query: 496 NLSYLSVGENNLQSIP 511
            + Y  +  N+++S P
Sbjct: 759 KMRYAELSRNSMESPP 774



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 6/202 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           +  LD+S + I +    V  L  ++ L L G  L   P  IG++  L  L  +EN + +L
Sbjct: 576 LTELDVSNNPIKNWSLDVSNLRKMKHLRLRGVGLDRCPEGIGHLNKLESLDFSENHIDTL 635

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
             S+A L +L+ L LR N + +L   V  + SL  L    N ++ + P++   + L  L 
Sbjct: 636 DQSMAALFKLKKLGLRGNNIRDLGSCVGSMISLTSLDAGGNNLELISPELSRCTALETLD 695

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +    I +LP  L  L  L  L    N L  +P +    T L  L L  N+L ++P    
Sbjct: 696 VSGGTINQLPDGLSMLTRLRVLRAQDNGLRAIPPDFQTLTALEELRLGGNQLSSLP---A 752

Query: 283 NLINLTRLR---LSYNRLESVP 301
           +LI LT++R   LS N +ES P
Sbjct: 753 SLITLTKMRYAELSRNSMESPP 774



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 5/183 (2%)

Query: 97  RCKE-----ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTC 151
           RC E       + +LD S++ I  L  S+  L  L++L L GN +  L S +G + +LT 
Sbjct: 611 RCPEGIGHLNKLESLDFSENHIDTLDQSMAALFKLKKLGLRGNNIRDLGSCVGSMISLTS 670

Query: 152 LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD 211
           L    N+L  +   L+    L  LD+    +N+LP  +  LT L++L  + N ++ + PD
Sbjct: 671 LDAGGNNLELISPELSRCTALETLDVSGGTINQLPDGLSMLTRLRVLRAQDNGLRAIPPD 730

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
            Q L+ L  L +  N++  LP  L  L  +   +L+ N +E  P       +L  L L  
Sbjct: 731 FQTLTALEELRLGGNQLSSLPASLITLTKMRYAELSRNSMESPPPVTRQWPLLTHLVLSR 790

Query: 272 NEL 274
           N L
Sbjct: 791 NPL 793



 Score = 45.4 bits (106), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 61/128 (47%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++ +LD   +++  + P + + T LE L + G  +  LP  +  +T L  L   +N L +
Sbjct: 667 SLTSLDAGGNNLELISPELSRCTALETLDVSGGTINQLPDGLSMLTRLRVLRAQDNGLRA 726

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           +P     L  L  L L  N+L+ LP  +  LT ++   L  N +++  P  +    L+ L
Sbjct: 727 IPPDFQTLTALEELRLGGNQLSSLPASLITLTKMRYAELSRNSMESPPPVTRQWPLLTHL 786

Query: 222 SMRDNKIR 229
            +  N +R
Sbjct: 787 VLSRNPLR 794


>gi|440296929|gb|ELP89675.1| leucine-rich repeat containing protein, putative [Entamoeba
           invadens IP1]
          Length = 850

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 142/480 (29%), Positives = 240/480 (50%), Gaps = 25/480 (5%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDLS +SI+ +P  + ++++L+E+ L  NK+ SLP ++  +T+L  + +  N L 
Sbjct: 73  QNLKTLDLSNNSISIVPSRIGEMSNLQEIILGQNKIESLPDEMSKMTSLVNMTITANRLK 132

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP SL+ L +L  +DL +NK  + P V+ KL S+K L+L +N +  ++  I  + NL+ 
Sbjct: 133 DLPSSLSTLTKLTFVDLCNNKFTQFPGVLGKLYSIKTLWLCYNYLSELN-GIGGMRNLNQ 191

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N    +P E+  L  L +++   N ++ +P EI N T L ++      L +IP+ 
Sbjct: 192 LKLLHNNFTHIPKEVLTLTQLYSIEFGDNLIQTIPTEISNLTNLKSIAFTDCLLKDIPEE 251

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHL------------NEFNVEGCALSSLPDGL- 327
           + +L NL  L +  +RL   P+ L K  +L             EF V+ C L    + L 
Sbjct: 252 ITHLTNLNSLVIVRSRLTKFPKFLRKLPNLYDIMITDSMMPKAEFTVDNCELMFERNRLE 311

Query: 328 ---LSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
               ++  S+ ++ L  N     P+       ++  ++  +N I  +        ++L  
Sbjct: 312 ALNCTANDSVASLKLKDNFLQRVPNTA--DLKTIAELDLTNNVIYNVEQNRLH--QDLKS 367

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL-SEDIQNLVNLEVLVLSNNLLKKLPS 443
           +N+  N ++  P     +  L +LNL  N +S+L S   Q + +L+ L L+ N L  LP+
Sbjct: 368 LNLASNRISVFPEKGINYSHLLKLNLSNNALSQLPSSLFQYIPHLQHLQLALNNLVTLPT 427

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
           S+  L  L  L++  NK    P +I  LK+L  L    N +  LP+ +  L NL  L +G
Sbjct: 428 SLTQLNGLLELNISHNKFAEFPQDILKLKKLTNLFATCNYISDLPKNLSLLENLVVLDLG 487

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL-DNCPLSQIPSEIV 562
            NNL S  +++  L N+ +L L  N  L  IP  L+L   L+ +S     P  Q P EIV
Sbjct: 488 CNNLIS-ADQVVQLSNVKSLSLAFNRNL-TIPSNLSLLQKLEDVSFTGTVPCVQYPLEIV 545



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 185/394 (46%), Gaps = 24/394 (6%)

Query: 154 LAENSLTSLP-DSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
           +    L ++P D+    + L++LDL  N + EL +   K T+L ++  R N +  V   +
Sbjct: 10  MKSQGLDAVPQDAFRQYRTLKMLDLSLNNIRELDLNFGKFTALTLVRFRGNLLSKVPEVL 69

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L NL  L + +N I  +P  +GE+ NL  + L  N +E LP E+   T LV + +  N
Sbjct: 70  LSLQNLKTLDLSNNSISIVPSRIGEMSNLQEIILGQNKIESLPDEMSKMTSLVNMTITAN 129

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
            L ++P  L  L  LT + L  N+    P  L K   +    +    LS L +G +  + 
Sbjct: 130 RLKDLPSSLSTLTKLTFVDLCNNKFTQFPGVLGKLYSIKTLWLCYNYLSEL-NG-IGGMR 187

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
           ++N + L  N FT  P    T  T +YSI F  N I  IP  I S   NL  +   D LL
Sbjct: 188 NLNQLKLLHNNFTHIPKEVLT-LTQLYSIEFGDNLIQTIPTEI-SNLTNLKSIAFTDCLL 245

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGN----- 447
             +P ++     L  L +  ++++K  + ++ L NL  ++++++++ K   ++ N     
Sbjct: 246 KDIPEEITHLTNLNSLVIVRSRLTKFPKFLRKLPNLYDIMITDSMMPKAEFTVDNCELMF 305

Query: 448 ----LRKLKC--------LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
               L  L C        L L++N L+ +PN    LK +  L L +N + ++ +   H  
Sbjct: 306 ERNRLEALNCTANDSVASLKLKDNFLQRVPNTAD-LKTIAELDLTNNVIYNVEQNRLH-Q 363

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
           +L  L++  N +   PE+     +L  L L++N 
Sbjct: 364 DLKSLNLASNRISVFPEKGINYSHLLKLNLSNNA 397



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 113/239 (47%), Gaps = 46/239 (19%)

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
           +D +P   F + + L  +++  N +  L L+ G +  LT +    N +SK+ E + +L N
Sbjct: 15  LDAVPQDAFRQYRTLKMLDLSLNNIRELDLNFGKFTALTLVRFRGNLLSKVPEVLLSLQN 74

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           L+ L LSNN +  +PS IG +  L+ + L +NK+ESLP+E+  +  L  + + +N+L  L
Sbjct: 75  LKTLDLSNNSISIVPSRIGEMSNLQEIILGQNKIESLPDEMSKMTSLVNMTITANRLKDL 134

Query: 488 PRA---------------------------------------------IGHLTNLSYLSV 502
           P +                                             IG + NL+ L +
Sbjct: 135 PSSLSTLTKLTFVDLCNNKFTQFPGVLGKLYSIKTLWLCYNYLSELNGIGGMRNLNQLKL 194

Query: 503 GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             NN   IP+E+ TL  L+++   DN  +  IP E++  +NL+ ++  +C L  IP EI
Sbjct: 195 LHNNFTHIPKEVLTLTQLYSIEFGDNL-IQTIPTEISNLTNLKSIAFTDCLLKDIPEEI 252


>gi|242007056|ref|XP_002424358.1| leucine-rich repeat-containing protein 1, lrrc1/lap4, putative
           [Pediculus humanus corporis]
 gi|212507758|gb|EEB11620.1| leucine-rich repeat-containing protein 1, lrrc1/lap4, putative
           [Pediculus humanus corporis]
          Length = 1463

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 199/390 (51%), Gaps = 28/390 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L  +P  V + + SL+ L L  N I+ +  +   L  L  L + DN+I
Sbjct: 13  RQVEYVDKRHCFLQSVPEDVMRYSRSLEELLLDANHIRDLPKNFFRLQRLRRLGLSDNEI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LPP++G  +NLV LD++ N ++++P+ I +   L   D   N +  +P    +L NLT
Sbjct: 73  QNLPPDIGNFENLVELDVSRNDIQDIPENIKSLQALQVADFSSNPIQRLPPGFVHLKNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L S+P  L     L    +    L SLPD  LS LT +  + L  N+    P
Sbjct: 133 TLGLNDMSLTSLPPDLGNLTSLQSLELRENLLKSLPD-TLSQLTKLERLDLGDNEIEILP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
                            + I K+P         L ++ +  N L  +P ++G    LT L
Sbjct: 192 -----------------HHIGKLPA--------LLELWLDHNQLQHIPPEIGQLKKLTCL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++  L E+I+ L NL  L LS N+++ LP  IG+L KL  L +++N+L  L   I
Sbjct: 227 DISENRLEDLPEEIRGLTNLTDLHLSQNVIENLPDGIGDLEKLTILKVDQNRLAVLNPNI 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G    LQ LIL  N L+ LP  IG+L NL+ L+V  N+LQ +P EIG L +L  L L DN
Sbjct: 287 GKCLNLQELILTENFLLELPITIGNLVNLNNLNVDRNSLQRLPVEIGNLSHLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L ++P E+  CS L ++ +    L  +P
Sbjct: 347 K-LTHLPNEVGNCSELHVLHVSGNRLQYLP 375



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 194/405 (47%), Gaps = 50/405 (12%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           LEEL L  N +  LP     +  L  LGL++N + +LP  + N + L  LD+  N + ++
Sbjct: 39  LEELLLDANHIRDLPKNFFRLQRLRRLGLSDNEIQNLPPDIGNFENLVELDVSRNDIQDI 98

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  +  L +L++     N I+ + P   +L NL+ L + D  +  LPP+LG L +L +L+
Sbjct: 99  PENIKSLQALQVADFSSNPIQRLPPGFVHLKNLTTLGLNDMSLTSLPPDLGNLTSLQSLE 158

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           L  N L+ LP  +   T L  LDL  NE+  +P  +G L  L  L L +N+L+ +P  + 
Sbjct: 159 LRENLLKSLPDTLSQLTKLERLDLGDNEIEILPHHIGKLPALLELWLDHNQLQHIPPEIG 218

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
           +   L   ++    L  LP+  +  LT++ ++ LS+N     P G               
Sbjct: 219 QLKKLTCLDISENRLEDLPEE-IRGLTNLTDLHLSQNVIENLPDG--------------- 262

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
                                            +G    LT L +  N+++ L+ +I   
Sbjct: 263 ---------------------------------IGDLEKLTILKVDQNRLAVLNPNIGKC 289

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
           +NL+ L+L+ N L +LP +IGNL  L  L+++ N L+ LP EIG L  L  L L+ N+L 
Sbjct: 290 LNLQELILTENFLLELPITIGNLVNLNNLNVDRNSLQRLPVEIGNLSHLGVLSLRDNKLT 349

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
            LP  +G+ + L  L V  N LQ +P  +  L NL  ++L++N  
Sbjct: 350 HLPNEVGNCSELHVLHVSGNRLQYLPFSLAKL-NLKAVWLSENQA 393



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 182/364 (50%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P +++ L  L+      N +  LP    ++ NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIQDIPENIKSLQALQVADFSSNPIQRLPPGFVHLKNLTTLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP  L NL  L+ L+LR N L  LP  + +LT L+ L L  N I+ +   I  L  L  
Sbjct: 143 SLPPDLGNLTSLQSLELRENLLKSLPDTLSQLTKLERLDLGDNEIEILPHHIGKLPALLE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ +PPE+G+LK L  LD++ N LE+LP+EI   T L  L L  N + N+PD 
Sbjct: 203 LWLDHNQLQHIPPEIGQLKKLTCLDISENRLEDLPEEIRGLTNLTDLHLSQNVIENLPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G+L  LT L++  NRL  +   + KC++L E  +    L  LP            IT+ 
Sbjct: 263 IGDLEKLTILKVDQNRLAVLNPNIGKCLNLQELILTENFLLELP------------ITIG 310

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
                           ++ ++N + N + ++P  I     +L  ++++DN LT LP ++G
Sbjct: 311 -------------NLVNLNNLNVDRNSLQRLPVEI-GNLSHLGVLSLRDNKLTHLPNEVG 356

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
                                  N   L VL +S N L+ LP S+  L  LK + L EN+
Sbjct: 357 -----------------------NCSELHVLHVSGNRLQYLPFSLAKL-NLKAVWLSENQ 392

Query: 461 LESL 464
            + L
Sbjct: 393 AQPL 396



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 152/345 (44%), Gaps = 48/345 (13%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  NH+ +LPK       L  L L  NE+ N+P  +GN  NL  L +S N ++
Sbjct: 37  RSLEELLLDANHIRDLPKNFFRLQRLRRLGLSDNEIQNLPPDIGNFENLVELDVSRNDIQ 96

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
            +PE +     L   +     +  LP G +  L ++  + L+    T+ P          
Sbjct: 97  DIPENIKSLQALQVADFSSNPIQRLPPGFVH-LKNLTTLGLNDMSLTSLPPD-------- 147

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
                                 +L  + +++NLL SLP  L     L  L+LG N+I  L
Sbjct: 148 -----------------LGNLTSLQSLELRENLLKSLPDTLSQLTKLERLDLGDNEIEIL 190

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
              I  L  L  L L +N L+ +P  IG L+KL CLD+ EN+LE LP EI  L  L  L 
Sbjct: 191 PHHIGKLPALLELWLDHNQLQHIPPEIGQLKKLTCLDISENRLEDLPEEIRGLTNLTDLH 250

Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN---------- 528
           L  N + +LP  IG L  L+ L V +N L  +   IG   NL  L L +N          
Sbjct: 251 LSQNVIENLPDGIGDLEKLTILKVDQNRLAVLNPNIGKCLNLQELILTENFLLELPITIG 310

Query: 529 ------------TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                         L  +P E+   S+L ++SL +  L+ +P+E+
Sbjct: 311 NLVNLNNLNVDRNSLQRLPVEIGNLSHLGVLSLRDNKLTHLPNEV 355


>gi|410909357|ref|XP_003968157.1| PREDICTED: protein scribble homolog [Takifugu rubripes]
          Length = 1701

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 194/389 (49%), Gaps = 32/389 (8%)

Query: 175 LDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           +D RH  L+ +P  +++ + SL+ L L  N++K +      L NL  L + DN+I+ LPP
Sbjct: 17  VDKRHCNLHTVPDEIFRYSRSLEELLLDANQLKELPKPFFRLLNLRKLGLSDNEIQRLPP 76

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM------------- 280
           E+     LV LD++ N + E+P+ I  C  L   D   N L  +PD              
Sbjct: 77  EVANFMQLVELDISRNDIPEIPESIKFCRALEIADFSGNPLSRLPDGFTQLRTLAHLALN 136

Query: 281 ----------LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
                     +GNL NL  L L  N L+S+P +LS  V L + ++    L  LPD  L +
Sbjct: 137 DVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLDLGSNELEDLPD-TLGA 195

Query: 331 LTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           L ++  + L RN+ +  P   G       +  ++   N+++++P  +         +  +
Sbjct: 196 LPNLRELWLDRNQLSTLPEELG---NLRRLVCLDVSENRLEELPSELNGLLALTDLLLTQ 252

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
            NLL  +P  +G+   L+ L +  N+++ L++ I    NL  LVL+ NLL+ LP S+G L
Sbjct: 253 -NLLEFVPDSIGSLKQLSILKVDQNRMTNLTDSIGECENLTELVLTENLLQSLPQSLGKL 311

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
           +KL  L+++ N+L S+P E+G    L  L L+ N+L  LP  +   T L  L V  N LQ
Sbjct: 312 KKLTNLNVDRNRLSSVPKELGGCSSLNVLSLRDNRLGKLPAELADATELHVLDVAGNRLQ 371

Query: 509 SIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           ++P  +  L NL  ++L +N     + F+
Sbjct: 372 NLPFSLTNL-NLKAMWLAENQSQPMLKFQ 399



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 172/347 (49%), Gaps = 50/347 (14%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L+ELPK       L  L L  NE+  +P  + N + L  L +S N + 
Sbjct: 36  RSLEELLLDANQLKELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIP 95

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
            +PE++  C  L   +  G  LS LPDG                          TQ  ++
Sbjct: 96  EIPESIKFCRALEIADFSGNPLSRLPDGF-------------------------TQLRTL 130

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
             +      +  +P  I + A NL  + +++NLL SLP  L   V L +L+LG+N++  L
Sbjct: 131 AHLALNDVSLQTLPNDIGNLA-NLVTLELRENLLKSLPTSLSFLVKLEQLDLGSNELEDL 189

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE----------- 467
            + +  L NL  L L  N L  LP  +GNLR+L CLD+ EN+LE LP+E           
Sbjct: 190 PDTLGALPNLRELWLDRNQLSTLPEELGNLRRLVCLDVSENRLEELPSELNGLLALTDLL 249

Query: 468 ------------IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
                       IG LK+L  L +  N++ +L  +IG   NL+ L + EN LQS+P+ +G
Sbjct: 250 LTQNLLEFVPDSIGSLKQLSILKVDQNRMTNLTDSIGECENLTELVLTENLLQSLPQSLG 309

Query: 516 TLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
            L+ L  L ++ N  L+++P EL  CS+L ++SL +  L ++P+E+ 
Sbjct: 310 KLKKLTNLNVDRNR-LSSVPKELGGCSSLNVLSLRDNRLGKLPAELA 355



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 120/359 (33%), Positives = 190/359 (52%), Gaps = 6/359 (1%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           LEEL L  N+L  LP     + NL  LGL++N +  LP  +AN  QL  LD+  N + E+
Sbjct: 38  LEELLLDANQLKELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEI 97

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  +    +L+I     N +  +      L  L+ L++ D  ++ LP ++G L NLVTL+
Sbjct: 98  PESIKFCRALEIADFSGNPLSRLPDGFTQLRTLAHLALNDVSLQTLPNDIGNLANLVTLE 157

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           L  N L+ LP  +     L  LDL  NEL ++PD LG L NL  L L  N+L ++PE L 
Sbjct: 158 LRENLLKSLPTSLSFLVKLEQLDLGSNELEDLPDTLGALPNLRELWLDRNQLSTLPEELG 217

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP-SGGPTQFTSVYSINFE 364
               L   +V    L  LP   L+ L ++ ++ L++N     P S G  +  S+  ++  
Sbjct: 218 NLRRLVCLDVSENRLEELP-SELNGLLALTDLLLTQNLLEFVPDSIGSLKQLSILKVD-- 274

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN 424
            N++  +   I    +NL+++ + +NLL SLP  LG    LT LN+  N++S + +++  
Sbjct: 275 QNRMTNLTDSI-GECENLTELVLTENLLQSLPQSLGKLKKLTNLNVDRNRLSSVPKELGG 333

Query: 425 LVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
             +L VL L +N L KLP+ + +  +L  LD+  N+L++LP  +  L  L+ + L  NQ
Sbjct: 334 CSSLNVLSLRDNRLGKLPAELADATELHVLDVAGNRLQNLPFSLTNLN-LKAMWLAENQ 391



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 165/315 (52%), Gaps = 8/315 (2%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
            ++ LD+S++ I  +P S++    LE     GN L+ LP     +  L  L L + SL +
Sbjct: 83  QLVELDISRNDIPEIPESIKFCRALEIADFSGNPLSRLPDGFTQLRTLAHLALNDVSLQT 142

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP+ + NL  L  L+LR N L  LP  +  L  L+ L L  N ++ +   +  L NL  L
Sbjct: 143 LPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLDLGSNELEDLPDTLGALPNLREL 202

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  LP ELG L+ LV LD++ N LEELP E+     L  L L  N L  +PD +
Sbjct: 203 WLDRNQLSTLPEELGNLRRLVCLDVSENRLEELPSELNGLLALTDLLLTQNLLEFVPDSI 262

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G+L  L+ L++  NR+ ++ +++ +C +L E  +    L SLP   L  L  + N+ + R
Sbjct: 263 GSLKQLSILKVDQNRMTNLTDSIGECENLTELVLTENLLQSLPQS-LGKLKKLTNLNVDR 321

Query: 342 NKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           N+ ++ P   GG    +S+  ++   N++ K+P  + + A  L  +++  N L +LP  L
Sbjct: 322 NRLSSVPKELGG---CSSLNVLSLRDNRLGKLPAEL-ADATELHVLDVAGNRLQNLPFSL 377

Query: 400 GTWVGLTELNLGTNQ 414
            T + L  + L  NQ
Sbjct: 378 -TNLNLKAMWLAENQ 391


>gi|167519697|ref|XP_001744188.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777274|gb|EDQ90891.1| predicted protein [Monosiga brevicollis MX1]
          Length = 570

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 223/514 (43%), Gaps = 92/514 (17%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           L  L L  N+L +LP Q+  + +LT L   +N +T + + L  L QL+ L+L  N L  L
Sbjct: 59  LARLILSCNQLTTLPEQLELLPDLTLLDAHDNKITVISERLGQLAQLKALNLGQNCLENL 118

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  +Y L +L+ L L  N ++++ P ++ LS L  L    N++ ELP  L +L +L  L 
Sbjct: 119 PQSLYHLPALQSLKLDNNALRSLAPALRQLSELRELDASHNRLVELPESLCDLPHLARLR 178

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           L HN LE LP   G    L  LD+ HN L ++P  LG+L ++TRL + YN L+ +P    
Sbjct: 179 LGHNQLESLPAPFGQLEALQELDIVHNRLTSLPTKLGSLSHITRLDVRYNALQRLPS--- 235

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
                                 L+S+T +  + +  N+       G      +  ++   
Sbjct: 236 ----------------------LASMTQLKELLVGYNQIHTLGDLGALLPAGLVLLDVRD 273

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI--- 422
           N+I  IP  I +  + L ++ + +N ++SLP +LG    +  ++L  N +  L  DI   
Sbjct: 274 NKIADIPATIAA-LRQLERLELSNNDISSLPPELGLVRSIKAISLDGNPLRSLRRDIVRR 332

Query: 423 ------------------------------------QNLVNLEVLVLSNNLLKKLPSSI- 445
                                                +L     L LSN  L  +PS I 
Sbjct: 333 GTLAILEHLRSRLPETAEVEPEAQQYAEQVAQRERQTDLAQTGALNLSNQGLDHVPSDIF 392

Query: 446 ------GNLRK----------------LKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
                 G L+K                L  LDL  N+L +L + IG L  L  L L+ N 
Sbjct: 393 QEAVEQGTLQKNKLLHLPAQVDQLSSTLTHLDLGFNRLSTLSSAIGLLPRLVSLELEGNA 452

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
           L SLP  +  L+ L  L +G N   ++P+ +  L  L  L LNDN      P  L  C  
Sbjct: 453 LTSLPEELALLSELQDLGLGHNRFTALPDVVRHLRALQNLMLNDNQVSTVDPDVLLACPM 512

Query: 544 LQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQG 577
           L+ + L N  + Q+P  + +    L +  LK++G
Sbjct: 513 LRCVDLHNNAIQQVPPRLGL----LNLHTLKLEG 542


>gi|330793753|ref|XP_003284947.1| leucine-rich repeat-containing protein [Dictyostelium purpureum]
 gi|325085163|gb|EGC38576.1| leucine-rich repeat-containing protein [Dictyostelium purpureum]
          Length = 509

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 239/498 (47%), Gaps = 58/498 (11%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +DL K +I  LPP+V  L   +EL L  N L ++P +IG ++ +  +  ++N +  +P  
Sbjct: 20  VDLRKMNIDKLPPTVGAL-QCKELLLSENDLITIPEEIGKLSKVEIIDFSKNRINYIPPE 78

Query: 166 LANLQQLRVLDLRHNKLNELPMV--VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           + +L  L+ L L +NKL   P+   +  L SL  L L  N++  +  ++  L  L  L +
Sbjct: 79  IGSLSTLKQLFLSNNKLFYTPLTPNLGSLKSLTRLDLSANQLDDLPVELSKLEALEYLDI 138

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
            DN+++  P E G+L NL   + + N L+ LP EI     L  L++ +N+L  +P+ +  
Sbjct: 139 SDNQLQSFPLEFGKLYNLQVFNCSKNSLKSLPGEISGWVKLQELNVSNNQLTFLPNQICL 198

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVE-GCALSSLPDGLLSSLTSINNITLSRN 342
           L  L+ L + +N+L+ VPE LS  V L + +++    L  +P   LS+L  +  +++   
Sbjct: 199 LGLLSTLNVGFNKLQQVPEELSSMVSLTDLDLKVNPPLQYVPQ--LSNLRQLKKLSIRNL 256

Query: 343 KFTAYPSGGPTQFTSVYSINFEHN-QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           + T  P G     + +  ++   N Q+ +IPY I +   NL K+++  N +  +P ++G 
Sbjct: 257 QITHLPLG-LGLLSELIELDIRDNPQLKEIPYDIATLI-NLQKLDLFGNNMRIVPREIGN 314

Query: 402 WVGLTELNLGTNQIS-------------------------KLSEDIQNLVNLEVLVLSNN 436
            + L  L+L  N+++                          L  +I ++  L+    SNN
Sbjct: 315 LINLQHLDLRQNKLTIDNIPSEIGKLVNLKKLLLSNNLLVALPPEISSMKALKEFEASNN 374

Query: 437 LLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
            L+ +P+ IG L  L  ++L  NKL S+P   G L EL    L+SN++  LP  +  L  
Sbjct: 375 QLQSVPAEIGELTGLTKINLSGNKLTSIPPSFGNLSELVICDLKSNEIAELPNTLNGLKA 434

Query: 497 LSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ 556
            +   +  N L  +P E G L                        + L I+ + + PL+ 
Sbjct: 435 CTKFDLSHNMLTELPWEFGDL------------------------TGLTILDVGHNPLTI 470

Query: 557 IPSEIVVGGPSLIIRYLK 574
            P+ IV+ G   II++LK
Sbjct: 471 PPNPIVMKGTETIIQWLK 488


>gi|149019124|gb|EDL77765.1| similar to RIKEN cDNA A430093J20 gene, isoform CRA_b [Rattus
           norvegicus]
          Length = 524

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 195/390 (50%), Gaps = 28/390 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + +  +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I
Sbjct: 12  RHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LPPE+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLT 131

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L ++   L+S+PE +    +L    +    L+ LPD L                     
Sbjct: 132 CLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL--------------------- 170

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
               TQ   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L
Sbjct: 171 ----TQLRRLEELDLGNNEIYSLPESIGALL-HLKDLWLDGNQLSELPQEIGNLRNLLCL 225

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L E+I  L++L  LV+S NLL+ +P  IG L+KL  L L++N+L  LP  I
Sbjct: 226 DVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAI 285

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + L  L+L  N+L++LP +IG L  L+ L+   N L S+P+EIG   +L    + DN
Sbjct: 286 GDCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFCIRDN 345

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L  IP E++    L ++ +    L  +P
Sbjct: 346 R-LTRIPSEVSQAMELHVLDVAGNRLHHLP 374



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 195/405 (48%), Gaps = 28/405 (6%)

Query: 125 HLEELYLYGNKLASLPSQI-GYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLN 183
           H+E +      L  +P +I  Y  +L  L L  N L  LP+    L +LR L L  N++ 
Sbjct: 13  HVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQ 72

Query: 184 ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVT 243
            LP  +     L  L +  N I  +   I +   L +     N +  LP    EL+NL  
Sbjct: 73  RLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTC 132

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L +    L+ LP+ IGN   L +L+L+ N L  +PD L  L  L  L L  N + S+PE+
Sbjct: 133 LSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPES 192

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           +   +HL +  ++G  LS LP         I N+   RN               +  ++ 
Sbjct: 193 IGALLHLKDLWLDGNQLSELPQ-------EIGNL---RN---------------LLCLDV 227

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
             N+++++P  I S   +L+ + +  NLL ++P  +G    L+ L L  N++++L E I 
Sbjct: 228 SENRLERLPEEI-SGLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAIG 286

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           +  NL  LVL+ N L  LP+SIG L+KL  L+ + NKL SLP EIG    L    ++ N+
Sbjct: 287 DCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFCIRDNR 346

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L  +P  +     L  L V  N L  +P  + TL+ L  L+L+DN
Sbjct: 347 LTRIPSEVSQAMELHVLDVAGNRLHHLPLSLTTLK-LKALWLSDN 390



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 201/434 (46%), Gaps = 55/434 (12%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++  +D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 7   LWRCNR-HVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFN---RIKTVHP 210
           L++N +  LP  +AN  QL  LD+  N + E+P  +    +L++     N   R+    P
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 211 DIQYLS--------------------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
           ++Q L+                    NL+ L +R+N +  LP  L +L+ L  LDL +N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           +  LP+ IG    L  L L  N+L  +P  +GNL NL  L +S NRLE +PE +S  + L
Sbjct: 186 IYSLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISL 245

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK 370
            +  V    L ++PDG+                          +   +  +  + N++ +
Sbjct: 246 TDLVVSQNLLETVPDGI-------------------------GKLKKLSILKLDQNRLTQ 280

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           +P  I    +NL+++ + +N L +LP  +G    L  LN   N++  L ++I    +L V
Sbjct: 281 LPEAI-GDCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTV 339

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ---LVSL 487
             + +N L ++PS +    +L  LD+  N+L  LP  +  LK L+ L L  NQ   L++ 
Sbjct: 340 FCIRDNRLTRIPSEVSQAMELHVLDVAGNRLHHLPLSLTTLK-LKALWLSDNQSQPLLTF 398

Query: 488 PRAIGHLTNLSYLS 501
              + H T    L+
Sbjct: 399 QTDVDHTTGEKILT 412



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 169/350 (48%), Gaps = 58/350 (16%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L ELP++      L  L L  NE+  +P  + N + L  L +S N + 
Sbjct: 36  RSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIP 95

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQ 354
            +PE++S C  L   +  G  L+ LP+    L +LT  S+N+I+L            P  
Sbjct: 96  EIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQ---------SLPEN 146

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
             ++Y                     NL+ + +++NLLT LP  L     L EL+LG N+
Sbjct: 147 IGNLY---------------------NLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           I  L E I  L++L+ L L  N L +LP  IGNLR L CLD+ EN+LE LP EI  L  L
Sbjct: 186 IYSLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISL 245

Query: 475 QRLIL-----------------------QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
             L++                         N+L  LP AIG   NL+ L + EN L ++P
Sbjct: 246 TDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLP 305

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             IG L+ L+ L  + N  L ++P E+  C +L +  + +  L++IPSE+
Sbjct: 306 TSIGKLKKLNNLNADRNK-LVSLPKEIGGCCSLTVFCIRDNRLTRIPSEV 354


>gi|359487164|ref|XP_003633525.1| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase At1g35710-like [Vitis vinifera]
          Length = 1378

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 168/488 (34%), Positives = 257/488 (52%), Gaps = 31/488 (6%)

Query: 105 NLDLSKSSITH-LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS- 161
           +L+LS ++++  +PPS+  L +L  LYL+ N+L  S+P +IG + +L  L L+ N+L+  
Sbjct: 199 DLELSTNNLSGPIPPSIGNLRNLTTLYLHRNELSGSIPQEIGLLRSLNDLQLSTNNLSGP 258

Query: 162 LPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKT-VHPDIQYLSNLS 219
           +P S+ NL+ L  L L  N+L   +P  +  L SL  L L  N +   + P I  L NL+
Sbjct: 259 IPPSIENLRNLTTLYLYQNELSGSIPQEIGLLISLNYLALSTNNLSGPILPSIGNLRNLT 318

Query: 220 MLSMRDNKIREL-PPELGELKNLVTLDLAHNHLEE-LPKEIGNCTMLVTLDLQHNELVN- 276
            L +  N++  L P E+G L++L  L+L+ N+L   +P  IGN   L TL L  NEL + 
Sbjct: 319 TLYLYQNELFGLIPQEIGLLRSLNDLELSTNNLSGPIPPSIGNLRNLTTLYLHRNELSSS 378

Query: 277 IPDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSS-LPD--GLLSSLT 332
           IP  +G L +L  L LS N L   +P ++    +L    +    LS  +P   GLL SL 
Sbjct: 379 IPQEIGLLRSLNNLALSTNNLSGPIPPSIGNLRNLTNLYLYNNELSGPIPQEIGLLRSLI 438

Query: 333 SI----NNITLSR--------NKFTAYPSGGPTQFTSVYSINFEHNQ-IDKIPYGIFSRA 379
            +    NN+T S         NK + +         S+  ++  +N  I  IP  I + +
Sbjct: 439 ELDLSDNNLTGSTPTSIGNLGNKLSGFIPSEIGLLRSLKDLDLSNNNLIGSIPTSIGNLS 498

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL-SEDIQNLVNLEVLVLSNNLL 438
             ++     + L  S+P D+     L+ L L  N +S +    +  L +L  L L NN L
Sbjct: 499 NLVTLFVHSNKLNGSIPQDIHLLSSLSVLALSNNNLSGIIPHSLGKLGSLTALYLRNNSL 558

Query: 439 K-KLPSSIGNLRKLKCLDLEENKL-ESLPNEIGFLKELQRLILQSNQLV-SLPRAIGHLT 495
              +P SIGNL KL  LDL  N+L  S+P E+GFL+ L  L   +N+L  S+P +IG+L 
Sbjct: 559 SGSIPYSIGNLSKLDTLDLHSNQLFGSIPREVGFLRSLFALDSSNNKLTGSIPTSIGNLV 618

Query: 496 NLSYLSVGENNLQ-SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL-DNCP 553
           NL+ L + +N L  SIP+E+G L++L  L L+DN    +IP  +    NL ++ L DN  
Sbjct: 619 NLTTLHISKNQLSGSIPQEVGWLKSLDKLDLSDNKITGSIPASIGNLGNLTVLYLSDNKI 678

Query: 554 LSQIPSEI 561
              IP E+
Sbjct: 679 NGSIPPEM 686



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 159/579 (27%), Positives = 268/579 (46%), Gaps = 105/579 (18%)

Query: 105 NLDLSKSSITH-LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLT-S 161
           NL LS ++++  +PPS+  L +L  LYLY N+L+  +P +IG + +L  L L++N+LT S
Sbjct: 391 NLALSTNNLSGPIPPSIGNLRNLTNLYLYNNELSGPIPQEIGLLRSLIELDLSDNNLTGS 450

Query: 162 LPDSLANL---------------QQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRI 205
            P S+ NL               + L+ LDL +N L   +P  +  L++L  L++  N++
Sbjct: 451 TPTSIGNLGNKLSGFIPSEIGLLRSLKDLDLSNNNLIGSIPTSIGNLSNLVTLFVHSNKL 510

Query: 206 KTVHP-DIQY------------------------LSNLSMLSMRDNKIR-ELPPELGELK 239
               P DI                          L +L+ L +R+N +   +P  +G L 
Sbjct: 511 NGSIPQDIHLLSSLSVLALSNNNLSGIIPHSLGKLGSLTALYLRNNSLSGSIPYSIGNLS 570

Query: 240 NLVTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRL 297
            L TLDL  N L   +P+E+G    L  LD  +N+L   IP  +GNL+NLT L +S N+L
Sbjct: 571 KLDTLDLHSNQLFGSIPREVGFLRSLFALDSSNNKLTGSIPTSIGNLVNLTTLHISKNQL 630

Query: 298 E-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFT 356
             S+P+ +     L++ ++    ++      + +L ++  + LS NK            T
Sbjct: 631 SGSIPQEVGWLKSLDKLDLSDNKITGSIPASIGNLGNLTVLYLSDNKINGSIPPEMRHLT 690

Query: 357 SVYSINFEHNQI-DKIPYGI--------FSRAKN---------------LSKVNMKDNLL 392
            + S+    N +  ++P+ I        F+   N               L +V ++ N L
Sbjct: 691 RLRSLELSENHLTGQLPHEICLGGVLENFTAEGNHLTGSIPKSLRNCTSLFRVRLERNQL 750

Query: 393 TS-LPLDLGTWVGLTELNLGTNQI-SKLSEDIQNLVNLEVLVLSNNLLKKL-PSSIGNLR 449
              +  D G +  L  ++L  N++  +LS       +L  L +SNN +  + P  +G   
Sbjct: 751 AGNITEDFGIYPNLLFIDLSYNKLYGELSHKWGQCNSLTSLKISNNNISGMIPHQLGEAT 810

Query: 450 KLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNL 507
           KL+ LDL  N L   +P E+G LK L  L++ +N+L   +P   G+L++L +L++  N+L
Sbjct: 811 KLEQLDLSSNHLVGEIPKELGMLKSLFNLVIDNNKLSGNIPLEFGNLSDLVHLNLASNHL 870

Query: 508 -------------------------QSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
                                    +SIP EIG +  L +L L  N     IP +L    
Sbjct: 871 SGPIPQQVRNFRKLLSLNLSNNKFGESIPAEIGNVITLESLDLCQNMLTGEIPQQLGELQ 930

Query: 543 NLQIMSLDNCPLS-QIPSEI--VVGGPSLIIRYLKMQGP 578
           +L+ ++L +  LS  IP     + G  S+ I Y +++GP
Sbjct: 931 SLETLNLSHNNLSGTIPPTFDDLRGLTSINISYNQLEGP 969



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 140/413 (33%), Positives = 198/413 (47%), Gaps = 48/413 (11%)

Query: 137 ASLPSQIGYVTNLTCLGLAENSLTS--LPDSLANLQQLRVLDLRHNKLNEL-PMVVYKLT 193
            ++P+ IG ++ L  L L+ N+L+   LP S+ NL+ L  L L  N+L+ L P  +  L 
Sbjct: 137 GTIPTNIGNISKLIYLALSTNNLSGPILP-SIGNLRNLTTLYLYQNELSGLIPQEIGLLR 195

Query: 194 SLKILYLRFNRIKT-VHPDIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHL 251
           SL  L L  N +   + P I  L NL+ L +  N++   +P E+G L++L  L L+ N+L
Sbjct: 196 SLNDLELSTNNLSGPIPPSIGNLRNLTTLYLHRNELSGSIPQEIGLLRSLNDLQLSTNNL 255

Query: 252 EE-LPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLES-VPETLSKCV 308
              +P  I N   L TL L  NEL   IP  +G LI+L  L LS N L   +  ++    
Sbjct: 256 SGPIPPSIENLRNLTTLYLYQNELSGSIPQEIGLLISLNYLALSTNNLSGPILPSIGNLR 315

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L    +    L  L    +  L S+N++ LS N  +     GP                
Sbjct: 316 NLTTLYLYQNELFGLIPQEIGLLRSLNDLELSTNNLS-----GP---------------- 354

Query: 369 DKIPYGIFSRAKNLSKVNMKDN-LLTSLPLDLGTWVGLTELNLGTNQISK-LSEDIQNLV 426
             IP  I    +NL+ + +  N L +S+P ++G    L  L L TN +S  +   I NL 
Sbjct: 355 --IPPSI-GNLRNLTTLYLHRNELSSSIPQEIGLLRSLNNLALSTNNLSGPIPPSIGNLR 411

Query: 427 NLEVLVLSNNLLKK-LPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQL 484
           NL  L L NN L   +P  IG LR L  LDL +N L  S P  IG L          N+L
Sbjct: 412 NLTNLYLYNNELSGPIPQEIGLLRSLIELDLSDNNLTGSTPTSIGNL---------GNKL 462

Query: 485 VS-LPRAIGHLTNLSYLSVGENNL-QSIPEEIGTLENLHTLYLNDNTCLNNIP 535
              +P  IG L +L  L +  NNL  SIP  IG L NL TL+++ N    +IP
Sbjct: 463 SGFIPSEIGLLRSLKDLDLSNNNLIGSIPTSIGNLSNLVTLFVHSNKLNGSIP 515


>gi|431838264|gb|ELK00196.1| Leucine-rich repeat-containing protein 1 [Pteropus alecto]
          Length = 489

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 174/344 (50%), Gaps = 27/344 (7%)

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L  L  L + DN+I+ LPPE+     LV LD++ N + E+P+ I  C  L   D   N L
Sbjct: 23  LVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPL 82

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+    L NLT L ++   L+S+PE +    +L    +    L+ LPD L       
Sbjct: 83  TRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL------- 135

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                             TQ   +  ++  +N+I  +P  I +   +L  + +  N L+ 
Sbjct: 136 ------------------TQLRRLEELDLGNNEIYSLPESIGALL-HLKDLWLDGNQLSE 176

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP ++G    L  L++  N++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L
Sbjct: 177 LPQEVGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPEGIGKLKKLSIL 236

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            +++N+L  LP  +G  + L  L+L  N+L++LP++IG L  LS L+   N L S+P+EI
Sbjct: 237 KVDQNRLTQLPETVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLMSLPKEI 296

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           G   +L    + DN  L  IP E++  + L ++ +    L  +P
Sbjct: 297 GGCCSLTVFCVRDNR-LTRIPAEVSQATELHVLDVAGNRLLHLP 339



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 121/346 (34%), Positives = 180/346 (52%), Gaps = 13/346 (3%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 49  LVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 108

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I ++   I  L +L  L 
Sbjct: 109 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLW 168

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IP+ +G
Sbjct: 169 LDGNQLSELPQEVGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPEGIG 228

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PET+  C  L E  +    L +LP   +  L  ++N+   RN
Sbjct: 229 KLKKLSILKVDQNRLTQLPETVGDCESLTELVLTENRLLTLPKS-IGKLKKLSNLNADRN 287

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +    N++ +IP  + S+A  L  +++  N L  LPL L 
Sbjct: 288 KLMSLPKEIGGCCSLT-VFCV--RDNRLTRIPAEV-SQATELHVLDVAGNRLLHLPLSL- 342

Query: 401 TWVGLTELNLGTNQISKL---SEDIQNLVNLEVLVLSNNLLKKLPS 443
           T + L  L L  NQ   L     DI +    ++L     LL +LPS
Sbjct: 343 TALKLKALWLSDNQSQPLLTFQTDIDHTTGEKILTCV--LLPQLPS 386



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 178/387 (45%), Gaps = 50/387 (12%)

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
           Q   +  L  LGL++N +  LP  +AN  QL  LD+  N + E+P  +    +L+I    
Sbjct: 19  QFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFS 78

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N +  +      L NL+ LS+ D  ++ LP  +G L NL +L+L  N L  LP  +   
Sbjct: 79  GNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQL 138

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L  LDL +NE+ ++P+ +G L++L  L L  N+L  +P+ +    +L   +V    L 
Sbjct: 139 RRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEVGNLKNLLCLDVSENRLE 198

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
            LP+  +S LTS+ ++ +S+N     P G                           + K 
Sbjct: 199 RLPEE-ISGLTSLTDLVISQNLLEIIPEG-------------------------IGKLKK 232

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           LS + +  N LT LP  +G    LTE                       LVL+ N L  L
Sbjct: 233 LSILKVDQNRLTQLPETVGDCESLTE-----------------------LVLTENRLLTL 269

Query: 442 PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLS 501
           P SIG L+KL  L+ + NKL SLP EIG    L    ++ N+L  +P  +   T L  L 
Sbjct: 270 PKSIGKLKKLSNLNADRNKLMSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLD 329

Query: 502 VGENNLQSIPEEIGTLENLHTLYLNDN 528
           V  N L  +P  +  L+ L  L+L+DN
Sbjct: 330 VAGNRLLHLPLSLTALK-LKALWLSDN 355



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 155/324 (47%), Gaps = 56/324 (17%)

Query: 264 LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSL 323
           L  L L  NE+  +P  + N + L  L +S N +  +PE++S C  L   +  G  L+ L
Sbjct: 26  LRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRL 85

Query: 324 PDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           P+    L +LT  S+N+I+L            P    ++Y                    
Sbjct: 86  PESFPELQNLTCLSVNDISLQ---------SLPENIGNLY-------------------- 116

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
            NL+ + +++NLLT LP  L     L EL+LG N+I  L E I  L++L+ L L  N L 
Sbjct: 117 -NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLS 175

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
           +LP  +GNL+ L CLD+ EN+LE LP EI  L  L  L++  N L  +P  IG L  LS 
Sbjct: 176 ELPQEVGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPEGIGKLKKLSI 235

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN----------------------NIPFE 537
           L V +N L  +PE +G  E+L  L L +N  L                       ++P E
Sbjct: 236 LKVDQNRLTQLPETVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLMSLPKE 295

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +  C +L +  + +  L++IP+E+
Sbjct: 296 IGGCCSLTVFCVRDNRLTRIPAEV 319



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 165/359 (45%), Gaps = 27/359 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + I  LPP +     L EL +  N +  +P  I +   L     + N LT LP+S
Sbjct: 29  LGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPES 88

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
              LQ L  L +    L  LP  +  L +L  L LR N +  +   +  L  L  L + +
Sbjct: 89  FPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGN 148

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I  LP  +G L +L  L L  N L ELP+E+GN   L+ LD+  N L  +P+ +  L 
Sbjct: 149 NEIYSLPESIGALLHLKDLWLDGNQLSELPQEVGNLKNLLCLDVSENRLERLPEEISGLT 208

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +LT L +S N LE +PE + K   L+   V+   L+ LP+  +    S+  + L+ N+  
Sbjct: 209 SLTDLVISQNLLEIIPEGIGKLKKLSILKVDQNRLTQLPET-VGDCESLTELVLTENRLL 267

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                             + K LS +N   N L SLP ++G    L
Sbjct: 268 TLPKS-------------------------IGKLKKLSNLNADRNKLMSLPKEIGGCCSL 302

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           T   +  N+++++  ++     L VL ++ N L  LP S+  L KLK L L +N+ + L
Sbjct: 303 TVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDNQSQPL 360



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 197/403 (48%), Gaps = 34/403 (8%)

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK 181
           +L  L +L L  N++  LP +I     L  L ++ N +  +P+S++  + L++ D   N 
Sbjct: 22  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNP 81

Query: 182 LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNL 241
           L  LP    +L +L  L +    ++++  +I  L NL+ L +R+N +  LP  L +L+ L
Sbjct: 82  LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL 141

Query: 242 VTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
             LDL +N +  LP+ IG    L  L L  N+L  +P  +GNL NL  L +S NRLE +P
Sbjct: 142 EELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEVGNLKNLLCLDVSENRLERLP 201

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYS 360
           E                         +S LTS+ ++ +S+N     P G G  +  S+  
Sbjct: 202 EE------------------------ISGLTSLTDLVISQNLLEIIPEGIGKLKKLSILK 237

Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
           +  + N++ ++P  +    ++L+++ + +N L +LP  +G    L+ LN   N++  L +
Sbjct: 238 V--DQNRLTQLPETV-GDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLMSLPK 294

Query: 421 DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQ 480
           +I    +L V  + +N L ++P+ +    +L  LD+  N+L  LP  +  LK L+ L L 
Sbjct: 295 EIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTALK-LKALWLS 353

Query: 481 SNQ---LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
            NQ   L++    I H T    L+     L  +P E    ENL
Sbjct: 354 DNQSQPLLTFQTDIDHTTGEKILTCVL--LPQLPSEPTCQENL 394



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 124/223 (55%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +L+L ++ +T+LP S+ +L  LEEL L  N++ SLP  IG + +L  L L  N L+ 
Sbjct: 117 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSE 176

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + NL+ L  LD+  N+L  LP  +  LTSL  L +  N ++ +   I  L  LS+L
Sbjct: 177 LPQEVGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPEGIGKLKKLSIL 236

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++ +LP  +G+ ++L  L L  N L  LPK IG    L  L+   N+L+++P  +
Sbjct: 237 KVDQNRLTQLPETVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLMSLPKEI 296

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
           G   +LT   +  NRL  +P  +S+   L+  +V G  L  LP
Sbjct: 297 GGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLP 339



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 1/199 (0%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            E N  ++     F +   L K+ + DN +  LP ++  ++ L EL++  N I ++ E I
Sbjct: 7   LELNMCERKQLRQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESI 66

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
                L++   S N L +LP S   L+ L CL + +  L+SLP  IG L  L  L L+ N
Sbjct: 67  SFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELREN 126

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
            L  LP ++  L  L  L +G N + S+PE IG L +L  L+L+ N  L+ +P E+    
Sbjct: 127 LLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQ-LSELPQEVGNLK 185

Query: 543 NLQIMSLDNCPLSQIPSEI 561
           NL  + +    L ++P EI
Sbjct: 186 NLLCLDVSENRLERLPEEI 204



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 4/125 (3%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E++  L L+++ +  LP S+ KL  L  L    NKL SLP +IG   +LT   + +N LT
Sbjct: 254 ESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLMSLPKEIGGCCSLTVFCVRDNRLT 313

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK---TVHPDIQYLSN 217
            +P  ++   +L VLD+  N+L  LP+ +  L  LK L+L  N+ +   T   DI + + 
Sbjct: 314 RIPAEVSQATELHVLDVAGNRLLHLPLSLTAL-KLKALWLSDNQSQPLLTFQTDIDHTTG 372

Query: 218 LSMLS 222
             +L+
Sbjct: 373 EKILT 377


>gi|149026333|gb|EDL82576.1| similar to hypothetical protein FLJ20331, isoform CRA_b [Rattus
           norvegicus]
          Length = 602

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 241/516 (46%), Gaps = 67/516 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LD+  + +T LP ++ +L +L++L +  NKL  LP +I  + NL  L L  N LT +P+ 
Sbjct: 110 LDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKMLPEEITSLKNLKALHLQHNELTCIPEG 169

Query: 166 LANLQQLRVLDLRHNKL-----------------------NELPMVVYKLTSLKILYLRF 202
             +L  L  LDL  N+L                         LP  + ++  LK L    
Sbjct: 170 FEHLSSLEDLDLSSNRLATVPADFALLSNLLRLNLSSNQLKNLPAEISRMKRLKHLDCDA 229

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE-IGNC 261
           N ++TV PD+  + +L +L +R NK+R LP E    + L  L LA N +E+L  E + + 
Sbjct: 230 NLLETVPPDVGSMESLELLYLRRNKLRVLP-EFPSCRQLKELYLAENQIEKLGAEHLQHL 288

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             ++ LDL+ N+L ++P+ +  L +L RL LS N + S+P +L   +HL    +EG  L 
Sbjct: 289 QAILVLDLRSNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGN-LHLKFLALEGNPLR 347

Query: 322 SLPDGLLSSLTS---------INNITLSRNKFT-----AYPSGGPTQFTSVYSI---NFE 364
           ++   +++  T          I +   ++N          PS       ++ ++   ++ 
Sbjct: 348 TIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIVTLKLLDYS 407

Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQN 424
             Q   IP  IF   KN                       +T +N   NQ+ ++ + I  
Sbjct: 408 DKQATLIPDDIFDATKN---------------------TVVTSINFSKNQLCEIPQRIAE 446

Query: 425 LVNLEVLV-LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           L  + + V LS N L  +   +  L+KL  LDL  N L SLP E+  L +LQ + L  N+
Sbjct: 447 LKEMVLDVNLSFNKLSLVSHELCLLQKLAFLDLRNNFLSSLPEEMSSLTKLQTINLSFNR 506

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSI-PEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
               P  + H++ L  + +  N + S+ P ++  +ENL TL L +N  L  IP EL  C 
Sbjct: 507 FKVFPAVLYHISTLETILISNNQVGSVDPLKMKLMENLSTLDLQNNDLLQ-IPPELGNCV 565

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGP 578
            L+ + LD  P     + I++ G + ++ YL+ + P
Sbjct: 566 QLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 601



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 171/332 (51%), Gaps = 7/332 (2%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L+LA  +L E+P+ +    + +  +   N   +  +      +LT+L +S N+L+S+ + 
Sbjct: 41  LNLAGRNLGEVPQCVWRINVDIPEEANQNLSFSSTERWWEQTDLTKLIISSNKLQSLSDD 100

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           L     L   ++    L+SLP   +  L ++  + +S NK    P    T   ++ +++ 
Sbjct: 101 LRLLPALTVLDIHDNQLTSLPSA-IRELDNLQKLNVSHNKLKMLPEEI-TSLKNLKALHL 158

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
           +HN++  IP G F    +L  +++  N L ++P D      L  LNL +NQ+  L  +I 
Sbjct: 159 QHNELTCIPEG-FEHLSSLEDLDLSSNRLATVPADFALLSNLLRLNLSSNQLKNLPAEIS 217

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
            +  L+ L    NLL+ +P  +G++  L+ L L  NKL  LP E    ++L+ L L  NQ
Sbjct: 218 RMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLP-EFPSCRQLKELYLAENQ 276

Query: 484 LVSL-PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           +  L    + HL  +  L +  N L+S+PEE+  L++L  L L++N  ++++P  L    
Sbjct: 277 IEKLGAEHLQHLQAILVLDLRSNKLRSVPEEMALLQSLERLDLSNND-ISSLPCSLGNL- 334

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
           +L+ ++L+  PL  I  EI+  G   +++YL+
Sbjct: 335 HLKFLALEGNPLRTIRREIIAKGTQEVLKYLR 366



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 169/337 (50%), Gaps = 37/337 (10%)

Query: 190 YKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHN 249
           ++ T L  L +  N+++++  D++ L  L++L + DN++  LP  + EL NL  L+++HN
Sbjct: 79  WEQTDLTKLIISSNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHN 138

Query: 250 HLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVH 309
            L+ LP+EI +   L  L LQHNEL  IP+   +L +L  L LS NRL +VP   +   +
Sbjct: 139 KLKMLPEEITSLKNLKALHLQHNELTCIPEGFEHLSSLEDLDLSSNRLATVPADFALLSN 198

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
           L   N+    L +LP              +SR K   +             ++ + N ++
Sbjct: 199 LLRLNLSSNQLKNLP------------AEISRMKRLKH-------------LDCDANLLE 233

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL-SEDIQNLVNL 428
            +P  + S  ++L  + ++ N L  LP +  +   L EL L  NQI KL +E +Q+L  +
Sbjct: 234 TVPPDVGS-MESLELLYLRRNKLRVLP-EFPSCRQLKELYLAENQIEKLGAEHLQHLQAI 291

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
            VL L +N L+ +P  +  L+ L+ LDL  N + SLP  +G L  L+ L L+ N L ++ 
Sbjct: 292 LVLDLRSNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HLKFLALEGNPLRTIR 350

Query: 489 RAI---GHLTNLSYLSVG-----ENNLQSIPEEIGTL 517
           R I   G    L YL         N   S+PE   TL
Sbjct: 351 REIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTL 387



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 139/325 (42%), Gaps = 50/325 (15%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           + IL LDL  + +  +P  +  L  LE L L  N ++SLP  +G + +L  L L  N L 
Sbjct: 289 QAILVLDLRSNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HLKFLALEGNPLR 347

Query: 161 SLPDSLAN------LQQLR--VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
           ++   +        L+ LR  + D R N+ + +P     L S                +I
Sbjct: 348 TIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPS------------EARVNI 395

Query: 213 QYLSNLSMLSMRDNKIRELPPELGEL-KNLV--TLDLAHNHLEELPKEIGNCT-MLVTLD 268
             +  L +L   D +   +P ++ +  KN V  +++ + N L E+P+ I     M++ ++
Sbjct: 396 HAIVTLKLLDYSDKQATLIPDDIFDATKNTVVTSINFSKNQLCEIPQRIAELKEMVLDVN 455

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
           L  N+L  +   L  L  L  L L  N L S+PE +S    L   N              
Sbjct: 456 LSFNKLSLVSHELCLLQKLAFLDLRNNFLSSLPEEMSSLTKLQTIN-------------- 501

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
                     LS N+F  +P+      +++ +I   +NQ+  +        +NLS ++++
Sbjct: 502 ----------LSFNRFKVFPAVL-YHISTLETILISNNQVGSVDPLKMKLMENLSTLDLQ 550

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTN 413
           +N L  +P +LG  V L  L L  N
Sbjct: 551 NNDLLQIPPELGNCVQLRTLLLDGN 575


>gi|297794625|ref|XP_002865197.1| flagellin-sensitive 2 [Arabidopsis lyrata subsp. lyrata]
 gi|297311032|gb|EFH41456.1| flagellin-sensitive 2 [Arabidopsis lyrata subsp. lyrata]
          Length = 1175

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 163/486 (33%), Positives = 241/486 (49%), Gaps = 51/486 (10%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-L 162
           LDL+ ++ T  +P  + KLT L EL LY N    S+PS+I  + NL  L L  N LT  +
Sbjct: 101 LDLTSNNFTGEIPAEIGKLTELNELSLYLNYFSGSIPSEIWELKNLMSLDLRNNLLTGDV 160

Query: 163 PDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSM 220
           P ++   + L V+ + +N L   +P  +  L  L++     NR+    P  +  L NL+ 
Sbjct: 161 PKAICKTRTLVVVGVGNNNLTGNIPDCLGDLVHLEVFVADINRLSGSIPVTVGTLVNLTN 220

Query: 221 LSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-I 277
           L +  N++   +P E+G L N+  L L  N LE E+P EIGNCT L+ L+L  N+L   I
Sbjct: 221 LDLSGNQLTGRIPREIGNLLNIQALVLFDNLLEGEIPAEIGNCTTLIDLELYGNQLTGRI 280

Query: 278 PDMLGNLINLTRLRLSYNRL-ESVPETLSKCVHLNEFNV-EGCALSSLPDGLLSSLTSIN 335
           P  LGNL+ L  LRL  N L  S+P +L +   L    + E   +  +P+  + SL S+ 
Sbjct: 281 PAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLRYLGLSENQLVGPIPEE-IGSLKSLQ 339

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI-DKIPY--GIFSRAKNLSKVNMKDNLL 392
            +TL  N  T       T   ++  +    N I  ++P   G+ +  +NLS     DN L
Sbjct: 340 VLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGELPADLGLLTNLRNLSA---HDNHL 396

Query: 393 TS-------------------------LPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLV 426
           T                          +P  LG+ + LT L+LG N+ + ++ +DI N  
Sbjct: 397 TGPIPSSISNCTGLKLLDLSFNKMTGKIPWGLGS-LNLTALSLGPNRFTGEIPDDIFNCS 455

Query: 427 NLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQL 484
           N+E L L+ NNL   L   IG L+KL+   +  N L   +P EIG L+EL  L L SN+ 
Sbjct: 456 NMETLNLAGNNLTGTLKPLIGKLKKLRIFQVSSNSLTGKIPGEIGNLRELILLYLHSNRF 515

Query: 485 VS-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
              +PR I +LT L  L +  N+L+  IPEE+  +  L  L L+ N     IP   AL S
Sbjct: 516 TGIIPREISNLTLLQGLGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIP---ALFS 572

Query: 543 NLQIMS 548
            LQ ++
Sbjct: 573 KLQSLT 578



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 138/429 (32%), Positives = 204/429 (47%), Gaps = 84/429 (19%)

Query: 162 LPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           L  ++ANL  L+VLDL  N    E+P  + KLT L  L L  N          Y S    
Sbjct: 88  LSPAIANLTYLQVLDLTSNNFTGEIPAEIGKLTELNELSLYLN----------YFSG--- 134

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELV-NIP 278
                     +P E+ ELKNL++LDL +N L  ++PK I     LV + + +N L  NIP
Sbjct: 135 ---------SIPSEIWELKNLMSLDLRNNLLTGDVPKAICKTRTLVVVGVGNNNLTGNIP 185

Query: 279 DMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           D LG+L++L       NRL  S+P T+   V+L                         N+
Sbjct: 186 DCLGDLVHLEVFVADINRLSGSIPVTVGTLVNL------------------------TNL 221

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS-LP 396
            LS N+ T                        +IP  I     N+  + + DNLL   +P
Sbjct: 222 DLSGNQLTG-----------------------RIPREI-GNLLNIQALVLFDNLLEGEIP 257

Query: 397 LDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVL-SNNLLKKLPSSIGNLRKLKCL 454
            ++G    L +L L  NQ++ ++  ++ NLV LE L L  NNL   LPSS+  L +L+ L
Sbjct: 258 AEIGNCTTLIDLELYGNQLTGRIPAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLRYL 317

Query: 455 DLEENKLES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IP 511
            L EN+L   +P EIG LK LQ L L SN L    P++I +L NL+ +++G N +   +P
Sbjct: 318 GLSENQLVGPIPEEIGSLKSLQVLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGELP 377

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIR 571
            ++G L NL  L  +DN     IP  ++ C+ L+++ L     +++  +I  G  SL + 
Sbjct: 378 ADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLKLLDLS---FNKMTGKIPWGLGSLNLT 434

Query: 572 YLKMQGPYR 580
            L + GP R
Sbjct: 435 ALSL-GPNR 442



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 144/473 (30%), Positives = 219/473 (46%), Gaps = 43/473 (9%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSL-TSLPDSLANLQQLR 173
           +P  +   T L +L LYGN+L   +P+++G +  L  L L  N+L +SLP SL  L +LR
Sbjct: 256 IPAEIGNCTTLIDLELYGNQLTGRIPAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLR 315

Query: 174 VLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIR-E 230
            L L  N+L   +P  +  L SL++L L  N +    P  I  L NL++++M  N I  E
Sbjct: 316 YLGLSENQLVGPIPEEIGSLKSLQVLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGE 375

Query: 231 LPPELGELKNLVTLDLAHNHLEE-LPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLT 288
           LP +LG L NL  L    NHL   +P  I NCT L  LDL  N++   IP  LG+L NLT
Sbjct: 376 LPADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLKLLDLSFNKMTGKIPWGLGSL-NLT 434

Query: 289 RLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            L L  NR    +P+ +  C ++   N+ G  L+     L+  L  +    +S N  T  
Sbjct: 435 ALSLGPNRFTGEIPDDIFNCSNMETLNLAGNNLTGTLKPLIGKLKKLRIFQVSSNSLTG- 493

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL-PLDLGTWVGLT 406
                                 KIP G     + L  + +  N  T + P ++     L 
Sbjct: 494 ----------------------KIP-GEIGNLRELILLYLHSNRFTGIIPREISNLTLLQ 530

Query: 407 ELNLGTNQI-SKLSEDIQNLVNLEVLVLSNNLLKK-LPSSIGNLRKLKCLDLEENKLE-S 463
            L L  N +   + E++ +++ L  L LS+N     +P+    L+ L  L L  NK   S
Sbjct: 531 GLGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIPALFSKLQSLTYLGLHGNKFNGS 590

Query: 464 LPNEIGFLKELQRLILQSNQLV-SLPRAI-GHLTNLS-YLSVGENNLQ-SIPEEIGTLEN 519
           +P  +  L  L    +  N L  ++P  +   + N+  YL+   N L  +I  E+G LE 
Sbjct: 591 IPASLKSLSLLNTFDISGNLLTGTIPEELLSSMKNMQLYLNFSNNFLTGTISNELGKLEM 650

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS-QIPSEIV-VGGPSLII 570
           +  +  ++N    +IP  L  C N+  +      LS QIP ++   GG  +II
Sbjct: 651 VQEIDFSNNLFSGSIPISLKACKNVFTLDFSRNNLSGQIPDDVFHQGGMDMII 703



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 194/423 (45%), Gaps = 65/423 (15%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
            P S+  L +L  + +  N ++  LP+ +G +TNL  L   +N LT  +P S++N   L+
Sbjct: 352 FPQSITNLRNLTVMTMGFNYISGELPADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLK 411

Query: 174 VLDLRHNKL------------------------NELPMVVYKLTSLKILYLRFNRI-KTV 208
           +LDL  NK+                         E+P  ++  ++++ L L  N +  T+
Sbjct: 412 LLDLSFNKMTGKIPWGLGSLNLTALSLGPNRFTGEIPDDIFNCSNMETLNLAGNNLTGTL 471

Query: 209 HPDIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLEEL-PKEIGNCTMLVT 266
            P I  L  L +  +  N +  ++P E+G L+ L+ L L  N    + P+EI N T+L  
Sbjct: 472 KPLIGKLKKLRIFQVSSNSLTGKIPGEIGNLRELILLYLHSNRFTGIIPREISNLTLLQG 531

Query: 267 LDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE-------------------------SV 300
           L L  N+L   IP+ + +++ L+ L LS N+                           S+
Sbjct: 532 LGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIPALFSKLQSLTYLGLHGNKFNGSI 591

Query: 301 PETLSKCVHLNEFNVEGCALS-SLPDGLLSSLTSIN-NITLSRNKFTAYPSGGPTQFTSV 358
           P +L     LN F++ G  L+ ++P+ LLSS+ ++   +  S N  T   S    +   V
Sbjct: 592 PASLKSLSLLNTFDISGNLLTGTIPEELLSSMKNMQLYLNFSNNFLTGTISNELGKLEMV 651

Query: 359 YSINFEHNQID-KIPYGIFSRAKNLSKVNM-KDNLLTSLPLDL---GTWVGLTELNLGTN 413
             I+F +N     IP  +    KN+  ++  ++NL   +P D+   G    +  LNL  N
Sbjct: 652 QEIDFSNNLFSGSIPISL-KACKNVFTLDFSRNNLSGQIPDDVFHQGGMDMIISLNLSRN 710

Query: 414 QISK-LSEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
            +S  + E   NL +L  L LS NNL  ++P S+ NL  LK L L  N L+    E G  
Sbjct: 711 SLSGGIPEGFGNLTHLVYLDLSSNNLTGEIPESLANLSTLKHLRLASNHLKGHVPESGVF 770

Query: 472 KEL 474
           K +
Sbjct: 771 KNI 773


>gi|321460374|gb|EFX71417.1| hypothetical protein DAPPUDRAFT_327214 [Daphnia pulex]
          Length = 1847

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 190/376 (50%), Gaps = 27/376 (7%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  + I  LP +  +L  L +L L  N++  +P  I    NL  L ++ N ++ +P+++ 
Sbjct: 41  LDANHIRDLPKNFFRLAKLRKLSLSDNEIQRIPQDIQNFENLVELDVSRNDISDIPETIK 100

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
           +++ L+V D   N +  LP    +L +L +L L    + ++  D   LSNL  + +R+N 
Sbjct: 101 HVKALQVADFSSNPIPRLPAGFVQLKNLTVLGLNDMSLSSLPLDFGSLSNLQSVELRENL 160

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           +R LP  + +L  L  LDL  N +E LP  IG+   L  L L HN+L  +P  L  L NL
Sbjct: 161 LRTLPESMSQLTKLERLDLGDNDIEILPAHIGSLPALTELWLDHNQLGQLPKELCQLTNL 220

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L +S N L+S+PE +   + L + ++    L SLPDG + +L+ +  + + +N+ T  
Sbjct: 221 ACLDVSENHLDSMPEEIGGLISLTDLHLSQNFLESLPDG-IGALSKLTILKVDQNRLT-- 277

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
                       ++N+              +   L ++ + +N LT LP  +G    LT 
Sbjct: 278 ------------TLNY-----------AIGKCVALQELILTENFLTELPTSIGNMTKLTN 314

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           LN+  N++ +L  ++ +LV L VL L  N L  LP+ +G+  +L  LD+  N+L+ LP  
Sbjct: 315 LNVDRNRLHELPVEVGHLVCLNVLSLRENKLHFLPNELGDCSELHVLDVSGNRLQYLPLS 374

Query: 468 IGFLKELQRLILQSNQ 483
           +  L  L+ + L  NQ
Sbjct: 375 LTGLN-LKAIWLSENQ 389



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 197/392 (50%), Gaps = 32/392 (8%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L  +P  +++ + SL+ L L  N I+ +  +   L+ L  LS+ DN+I
Sbjct: 10  RQVEYVDKRHCSLPSVPEDLWRYSRSLEELLLDANHIRDLPKNFFRLAKLRKLSLSDNEI 69

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + +P ++   +NLV LD++ N + ++P+ I +   L   D   N +  +P     L NLT
Sbjct: 70  QRIPQDIQNFENLVELDVSRNDISDIPETIKHVKALQVADFSSNPIPRLPAGFVQLKNLT 129

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L S+P       +L    +    L +LP+ + S LT +  + L  N     P
Sbjct: 130 VLGLNDMSLSSLPLDFGSLSNLQSVELRENLLRTLPESM-SQLTKLERLDLGDNDIEILP 188

Query: 349 S--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
           +  G     T ++    +HNQ+ ++P  +  +  NL+ +++ +N L S+P ++G  + LT
Sbjct: 189 AHIGSLPALTELW---LDHNQLGQLPKEL-CQLTNLACLDVSENHLDSMPEEIGGLISLT 244

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
           +L+L                       S N L+ LP  IG L KL  L +++N+L +L  
Sbjct: 245 DLHL-----------------------SQNFLESLPDGIGALSKLTILKVDQNRLTTLNY 281

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            IG    LQ LIL  N L  LP +IG++T L+ L+V  N L  +P E+G L  L+ L L 
Sbjct: 282 AIGKCVALQELILTENFLTELPTSIGNMTKLTNLNVDRNRLHELPVEVGHLVCLNVLSLR 341

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           +N  L+ +P EL  CS L ++ +    L  +P
Sbjct: 342 ENK-LHFLPNELGDCSELHVLDVSGNRLQYLP 372



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 188/385 (48%), Gaps = 27/385 (7%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           LEEL L  N +  LP     +  L  L L++N +  +P  + N + L  LD+  N ++++
Sbjct: 36  LEELLLDANHIRDLPKNFFRLAKLRKLSLSDNEIQRIPQDIQNFENLVELDVSRNDISDI 95

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  +  + +L++     N I  +      L NL++L + D  +  LP + G L NL +++
Sbjct: 96  PETIKHVKALQVADFSSNPIPRLPAGFVQLKNLTVLGLNDMSLSSLPLDFGSLSNLQSVE 155

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           L  N L  LP+ +   T L  LDL  N++  +P  +G+L  LT L L +N+L  +P+ L 
Sbjct: 156 LRENLLRTLPESMSQLTKLERLDLGDNDIEILPAHIGSLPALTELWLDHNQLGQLPKELC 215

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
           +  +L   +V    L S+P+  +  L S+ ++ LS+N   + P G               
Sbjct: 216 QLTNLACLDVSENHLDSMPE-EIGGLISLTDLHLSQNFLESLPDG--------------- 259

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
                   G  S+   L+ + +  N LT+L   +G  V L EL L  N +++L   I N+
Sbjct: 260 -------IGALSK---LTILKVDQNRLTTLNYAIGKCVALQELILTENFLTELPTSIGNM 309

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
             L  L +  N L +LP  +G+L  L  L L ENKL  LPNE+G   EL  L +  N+L 
Sbjct: 310 TKLTNLNVDRNRLHELPVEVGHLVCLNVLSLRENKLHFLPNELGDCSELHVLDVSGNRLQ 369

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSI 510
            LP ++  L NL  + + EN  Q +
Sbjct: 370 YLPLSLTGL-NLKAIWLSENQAQPM 393



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 181/364 (49%), Gaps = 50/364 (13%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I+ +P +++ +  L+      N +  LP+    + NLT LGL + SL+
Sbjct: 80  ENLVELDVSRNDISDIPETIKHVKALQVADFSSNPIPRLPAGFVQLKNLTVLGLNDMSLS 139

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP    +L  L+ ++LR N L  LP  + +LT L+ L L  N I+ +   I  L  L+ 
Sbjct: 140 SLPLDFGSLSNLQSVELRENLLRTLPESMSQLTKLERLDLGDNDIEILPAHIGSLPALTE 199

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N++ +LP EL +L NL  LD++ NHL+ +P+EIG    L  L L  N L ++PD 
Sbjct: 200 LWLDHNQLGQLPKELCQLTNLACLDVSENHLDSMPEEIGGLISLTDLHLSQNFLESLPDG 259

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L  LT L++  NRL ++   + KCV L E  +    L+ LP       TSI N+T  
Sbjct: 260 IGALSKLTILKVDQNRLTTLNYAIGKCVALQELILTENFLTELP-------TSIGNMT-- 310

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
                                                    L+ +N+  N L  LP+++G
Sbjct: 311 ----------------------------------------KLTNLNVDRNRLHELPVEVG 330

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
             V L  L+L  N++  L  ++ +   L VL +S N L+ LP S+  L  LK + L EN+
Sbjct: 331 HLVCLNVLSLRENKLHFLPNELGDCSELHVLDVSGNRLQYLPLSLTGL-NLKAIWLSENQ 389

Query: 461 LESL 464
            + +
Sbjct: 390 AQPM 393



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 149/327 (45%), Gaps = 35/327 (10%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  NH+ +LPK       L  L L  NE+  IP  + N  NL  L +S N + 
Sbjct: 34  RSLEELLLDANHIRDLPKNFFRLAKLRKLSLSDNEIQRIPQDIQNFENLVELDVSRNDIS 93

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLS----SLTSINNITLSRNKFTAYPSGGPTQ 354
            +PET+     L   +     +  LP G +     ++  +N+++LS           P  
Sbjct: 94  DIPETIKHVKALQVADFSSNPIPRLPAGFVQLKNLTVLGLNDMSLSSL---------PLD 144

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
           F S+                      NL  V +++NLL +LP  +     L  L+LG N 
Sbjct: 145 FGSL---------------------SNLQSVELRENLLRTLPESMSQLTKLERLDLGDND 183

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           I  L   I +L  L  L L +N L +LP  +  L  L CLD+ EN L+S+P EIG L  L
Sbjct: 184 IEILPAHIGSLPALTELWLDHNQLGQLPKELCQLTNLACLDVSENHLDSMPEEIGGLISL 243

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
             L L  N L SLP  IG L+ L+ L V +N L ++   IG    L  L L +N  L  +
Sbjct: 244 TDLHLSQNFLESLPDGIGALSKLTILKVDQNRLTTLNYAIGKCVALQELILTEN-FLTEL 302

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEI 561
           P  +   + L  +++D   L ++P E+
Sbjct: 303 PTSIGNMTKLTNLNVDRNRLHELPVEV 329


>gi|110626183|ref|NP_001007176.1| protein scribble homolog [Danio rerio]
 gi|123904207|sp|Q4H4B6.1|SCRIB_DANRE RecName: Full=Protein scribble homolog; AltName: Full=Scribble1
 gi|71000206|dbj|BAE07162.1| scribble1 [Danio rerio]
          Length = 1724

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 132/391 (33%), Positives = 201/391 (51%), Gaps = 8/391 (2%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++ ++D    S+T +P  + +    LEEL L  N+L  LP     + NL  LG
Sbjct: 7   LWRCNR-HVESVDKRHCSLTAVPDEIYRYNRSLEELLLDANQLRELPKPFFRLHNLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N ++E+P  +    SL+I     N +  +     
Sbjct: 66  LSDNEIQKLPPDVANFTQLVELDISRNDISEIPENIKFCQSLEIADFSGNPLTRLPDGFT 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L  L+ LS+ D  ++ LP ++G L NLVTL+L  N L+ LP  +     L  LDL  N 
Sbjct: 126 QLRGLAHLSLNDVSLQSLPNDIGNLSNLVTLELRENLLKSLPSSLSFLVKLEQLDLGSNV 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L  +PD LG L NL  L L  N+L S+P  L     L   +V    LS LP   +S L +
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRQLVCLDVSENRLSELPTE-ISGLIA 244

Query: 334 INNITLSRNKFTAYP-SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
           + ++ LS N     P S G  +  S+  +N   N++  +   I    +NL+++ + +NLL
Sbjct: 245 LTDLLLSENLLEILPDSIGSLKKLSILKVN--QNRLVHLTDSI-GECENLTELMLTENLL 301

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
            SLP  LG    LT LN+  N++S +  ++   V+L VL L +N L KLP  + N  +L 
Sbjct: 302 QSLPRSLGKLKKLTNLNVDRNRLSSVPAELGGCVSLNVLSLRDNRLGKLPPELANATELH 361

Query: 453 CLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
            LD+  N+L++LP  +  L  L+ + L  NQ
Sbjct: 362 VLDVAGNRLQNLPFALANLN-LKAMWLAENQ 391



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 194/391 (49%), Gaps = 30/391 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + +  +D RH  L  +P  +Y+   SL+ L L  N+++ +      L NL  L + DN+I
Sbjct: 12  RHVESVDKRHCSLTAVPDEIYRYNRSLEELLLDANQLRELPKPFFRLHNLRKLGLSDNEI 71

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           ++LPP++     LV LD++ N + E+P+ I  C  L   D   N L  +PD    L  L 
Sbjct: 72  QKLPPDVANFTQLVELDISRNDISEIPENIKFCQSLEIADFSGNPLTRLPDGFTQLRGLA 131

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS-RNKFTAY 347
            L L+   L+S+P  +                     G LS+L     +TL  R      
Sbjct: 132 HLSLNDVSLQSLPNDI---------------------GNLSNL-----VTLELRENLLKS 165

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
                +    +  ++   N ++ +P        NL ++ +  N L+SLP +LG    L  
Sbjct: 166 LPSSLSFLVKLEQLDLGSNVLEVLP-DTLGALPNLRELWLDRNQLSSLPPELGNLRQLVC 224

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           L++  N++S+L  +I  L+ L  L+LS NLL+ LP SIG+L+KL  L + +N+L  L + 
Sbjct: 225 LDVSENRLSELPTEISGLIALTDLLLSENLLEILPDSIGSLKKLSILKVNQNRLVHLTDS 284

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLND 527
           IG  + L  L+L  N L SLPR++G L  L+ L+V  N L S+P E+G   +L+ L L D
Sbjct: 285 IGECENLTELMLTENLLQSLPRSLGKLKKLTNLNVDRNRLSSVPAELGGCVSLNVLSLRD 344

Query: 528 NTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           N  L  +P ELA  + L ++ +    L  +P
Sbjct: 345 NR-LGKLPPELANATELHVLDVAGNRLQNLP 374



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 173/372 (46%), Gaps = 29/372 (7%)

Query: 93  KEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCL 152
           K F R    N+  L LS + I  LPP V   T L EL +  N ++ +P  I +  +L   
Sbjct: 53  KPFFRL--HNLRKLGLSDNEIQKLPPDVANFTQLVELDISRNDISEIPENIKFCQSLEIA 110

Query: 153 GLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDI 212
             + N LT LPD    L+ L  L L    L  LP  +  L++L  L LR N +K++   +
Sbjct: 111 DFSGNPLTRLPDGFTQLRGLAHLSLNDVSLQSLPNDIGNLSNLVTLELRENLLKSLPSSL 170

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
            +L  L  L +  N +  LP  LG L NL  L L  N L  LP E+GN   LV LD+  N
Sbjct: 171 SFLVKLEQLDLGSNVLEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRQLVCLDVSEN 230

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
            L  +P  +  LI LT L LS N LE +P+++     L+   V    L  L D  +    
Sbjct: 231 RLSELPTEISGLIALTDLLLSENLLEILPDSIGSLKKLSILKVNQNRLVHLTDS-IGECE 289

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
           ++  + L+ N   + P                             + K L+ +N+  N L
Sbjct: 290 NLTELMLTENLLQSLPRS-------------------------LGKLKKLTNLNVDRNRL 324

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
           +S+P +LG  V L  L+L  N++ KL  ++ N   L VL ++ N L+ LP ++ NL  LK
Sbjct: 325 SSVPAELGGCVSLNVLSLRDNRLGKLPPELANATELHVLDVAGNRLQNLPFALANL-NLK 383

Query: 453 CLDLEENKLESL 464
            + L EN+ + +
Sbjct: 384 AMWLAENQSQPM 395



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/328 (33%), Positives = 164/328 (50%), Gaps = 7/328 (2%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTM-LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           +++ ++D  H  L  +P EI      L  L L  N+L  +P     L NL +L LS N +
Sbjct: 12  RHVESVDKRHCSLTAVPDEIYRYNRSLEELLLDANQLRELPKPFFRLHNLRKLGLSDNEI 71

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
           + +P  ++    L E ++    +S +P+ +     S+     S N  T  P G  TQ   
Sbjct: 72  QKLPPDVANFTQLVELDISRNDISEIPENI-KFCQSLEIADFSGNPLTRLPDGF-TQLRG 129

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +  ++     +  +P  I     NL  + +++NLL SLP  L   V L +L+LG+N +  
Sbjct: 130 LAHLSLNDVSLQSLPNDI-GNLSNLVTLELRENLLKSLPSSLSFLVKLEQLDLGSNVLEV 188

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L + +  L NL  L L  N L  LP  +GNLR+L CLD+ EN+L  LP EI  L  L  L
Sbjct: 189 LPDTLGALPNLRELWLDRNQLSSLPPELGNLRQLVCLDVSENRLSELPTEISGLIALTDL 248

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +L  N L  LP +IG L  LS L V +N L  + + IG  ENL  L L +N  L ++P  
Sbjct: 249 LLSENLLEILPDSIGSLKKLSILKVNQNRLVHLTDSIGECENLTELMLTEN-LLQSLPRS 307

Query: 538 LALCSNLQIMSLDNCPLSQIPSEIVVGG 565
           L     L  +++D   LS +P+E+  GG
Sbjct: 308 LGKLKKLTNLNVDRNRLSSVPAEL--GG 333


>gi|359751203|emb|CCF03504.1| receptor kinase [Arabidopsis lyrata]
          Length = 1162

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 163/486 (33%), Positives = 241/486 (49%), Gaps = 51/486 (10%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-L 162
           LDL+ ++ T  +P  + KLT L EL LY N    S+PS+I  + NL  L L  N LT  +
Sbjct: 101 LDLTSNNFTGEIPAEIGKLTELNELSLYLNYFSGSIPSEIWELKNLMSLDLRNNLLTGDV 160

Query: 163 PDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSM 220
           P ++   + L V+ + +N L   +P  +  L  L++     NR+    P  +  L NL+ 
Sbjct: 161 PKAICKTRTLVVVGVGNNNLTGNIPDCLGDLVHLEVFVADINRLSGSIPVTVGTLVNLTN 220

Query: 221 LSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-I 277
           L +  N++   +P E+G L N+  L L  N LE E+P EIGNCT L+ L+L  N+L   I
Sbjct: 221 LDLSGNQLTGRIPREIGNLLNIQALVLFDNLLEGEIPAEIGNCTTLIDLELYGNQLTGRI 280

Query: 278 PDMLGNLINLTRLRLSYNRL-ESVPETLSKCVHLNEFNV-EGCALSSLPDGLLSSLTSIN 335
           P  LGNL+ L  LRL  N L  S+P +L +   L    + E   +  +P+  + SL S+ 
Sbjct: 281 PAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLRYLGLSENQLVGPIPEE-IGSLKSLQ 339

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI-DKIPY--GIFSRAKNLSKVNMKDNLL 392
            +TL  N  T       T   ++  +    N I  ++P   G+ +  +NLS     DN L
Sbjct: 340 VLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGELPADLGLLTNLRNLSA---HDNHL 396

Query: 393 TS-------------------------LPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLV 426
           T                          +P  LG+ + LT L+LG N+ + ++ +DI N  
Sbjct: 397 TGPIPSSISNCTGLKLLDLSFNKMTGKIPWGLGS-LNLTALSLGPNRFTGEIPDDIFNCS 455

Query: 427 NLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQL 484
           N+E L L+ NNL   L   IG L+KL+   +  N L   +P EIG L+EL  L L SN+ 
Sbjct: 456 NMETLNLAGNNLTGTLKPLIGKLKKLRIFQVSSNSLTGKIPGEIGNLRELILLYLHSNRF 515

Query: 485 VS-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
              +PR I +LT L  L +  N+L+  IPEE+  +  L  L L+ N     IP   AL S
Sbjct: 516 TGIIPREISNLTLLQGLGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIP---ALFS 572

Query: 543 NLQIMS 548
            LQ ++
Sbjct: 573 KLQSLT 578



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 138/429 (32%), Positives = 204/429 (47%), Gaps = 84/429 (19%)

Query: 162 LPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           L  ++ANL  L+VLDL  N    E+P  + KLT L  L L  N          Y S    
Sbjct: 88  LSPAIANLTYLQVLDLTSNNFTGEIPAEIGKLTELNELSLYLN----------YFSG--- 134

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELV-NIP 278
                     +P E+ ELKNL++LDL +N L  ++PK I     LV + + +N L  NIP
Sbjct: 135 ---------SIPSEIWELKNLMSLDLRNNLLTGDVPKAICKTRTLVVVGVGNNNLTGNIP 185

Query: 279 DMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           D LG+L++L       NRL  S+P T+   V+L                         N+
Sbjct: 186 DCLGDLVHLEVFVADINRLSGSIPVTVGTLVNL------------------------TNL 221

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS-LP 396
            LS N+ T                        +IP  I     N+  + + DNLL   +P
Sbjct: 222 DLSGNQLTG-----------------------RIPREI-GNLLNIQALVLFDNLLEGEIP 257

Query: 397 LDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVL-SNNLLKKLPSSIGNLRKLKCL 454
            ++G    L +L L  NQ++ ++  ++ NLV LE L L  NNL   LPSS+  L +L+ L
Sbjct: 258 AEIGNCTTLIDLELYGNQLTGRIPAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLRYL 317

Query: 455 DLEENKLES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IP 511
            L EN+L   +P EIG LK LQ L L SN L    P++I +L NL+ +++G N +   +P
Sbjct: 318 GLSENQLVGPIPEEIGSLKSLQVLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGELP 377

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIR 571
            ++G L NL  L  +DN     IP  ++ C+ L+++ L     +++  +I  G  SL + 
Sbjct: 378 ADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLKLLDLS---FNKMTGKIPWGLGSLNLT 434

Query: 572 YLKMQGPYR 580
            L + GP R
Sbjct: 435 ALSL-GPNR 442



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 220/473 (46%), Gaps = 43/473 (9%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSL-TSLPDSLANLQQLR 173
           +P  +   T L +L LYGN+L   +P+++G +  L  L L  N+L +SLP SL  L +LR
Sbjct: 256 IPAEIGNCTTLIDLELYGNQLTGRIPAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLR 315

Query: 174 VLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIR-E 230
            L L  N+L   +P  +  L SL++L L  N +    P  I  L NL++++M  N I  E
Sbjct: 316 YLGLSENQLVGPIPEEIGSLKSLQVLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGE 375

Query: 231 LPPELGELKNLVTLDLAHNHLEE-LPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLT 288
           LP +LG L NL  L    NHL   +P  I NCT L  LDL  N++   IP  LG+L NLT
Sbjct: 376 LPADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLKLLDLSFNKMTGKIPWGLGSL-NLT 434

Query: 289 RLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            L L  NR    +P+ +  C ++   N+ G  L+     L+  L  +    +S N  T  
Sbjct: 435 ALSLGPNRFTGEIPDDIFNCSNMETLNLAGNNLTGTLKPLIGKLKKLRIFQVSSNSLTG- 493

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL-PLDLGTWVGLT 406
                                 KIP G     + L  + +  N  T + P ++     L 
Sbjct: 494 ----------------------KIP-GEIGNLRELILLYLHSNRFTGIIPREISNLTLLQ 530

Query: 407 ELNLGTNQI-SKLSEDIQNLVNLEVLVLSNNLLKK-LPSSIGNLRKLKCLDLEENKLE-S 463
            L L  N +   + E++ +++ L  L LS+N     +P+    L+ L  L L  NK   S
Sbjct: 531 GLGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIPALFSKLQSLTYLGLHGNKFNGS 590

Query: 464 LPNEIGFLKELQRLILQSNQLV-SLPRAI-GHLTNLS-YLSVGENNLQ-SIPEEIGTLEN 519
           +P  +  L  L    +  N L  ++P  +   + N+  YL+   N L  +I  E+G LE 
Sbjct: 591 IPASLKSLSLLNTFDISGNLLTGTIPEELLSSMKNMQLYLNFSNNFLTGTISNELGKLEM 650

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS-QIPSEIV-VGGPSLII 570
           +  +  ++N    +IP  L  C N+ I+      LS QIP ++   GG  +II
Sbjct: 651 VQEIDFSNNLFSGSIPISLKACKNVFILDFSRNNLSGQIPDDVFHQGGMDMII 703



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 194/423 (45%), Gaps = 65/423 (15%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
            P S+  L +L  + +  N ++  LP+ +G +TNL  L   +N LT  +P S++N   L+
Sbjct: 352 FPQSITNLRNLTVMTMGFNYISGELPADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLK 411

Query: 174 VLDLRHNKL------------------------NELPMVVYKLTSLKILYLRFNRI-KTV 208
           +LDL  NK+                         E+P  ++  ++++ L L  N +  T+
Sbjct: 412 LLDLSFNKMTGKIPWGLGSLNLTALSLGPNRFTGEIPDDIFNCSNMETLNLAGNNLTGTL 471

Query: 209 HPDIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLEEL-PKEIGNCTMLVT 266
            P I  L  L +  +  N +  ++P E+G L+ L+ L L  N    + P+EI N T+L  
Sbjct: 472 KPLIGKLKKLRIFQVSSNSLTGKIPGEIGNLRELILLYLHSNRFTGIIPREISNLTLLQG 531

Query: 267 LDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE-------------------------SV 300
           L L  N+L   IP+ + +++ L+ L LS N+                           S+
Sbjct: 532 LGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIPALFSKLQSLTYLGLHGNKFNGSI 591

Query: 301 PETLSKCVHLNEFNVEGCALS-SLPDGLLSSLTSIN-NITLSRNKFTAYPSGGPTQFTSV 358
           P +L     LN F++ G  L+ ++P+ LLSS+ ++   +  S N  T   S    +   V
Sbjct: 592 PASLKSLSLLNTFDISGNLLTGTIPEELLSSMKNMQLYLNFSNNFLTGTISNELGKLEMV 651

Query: 359 YSINFEHNQI-DKIPYGIFSRAKNLSKVNM-KDNLLTSLPLDL---GTWVGLTELNLGTN 413
             I+F +N     IP  +    KN+  ++  ++NL   +P D+   G    +  LNL  N
Sbjct: 652 QEIDFSNNLFSGSIPISL-KACKNVFILDFSRNNLSGQIPDDVFHQGGMDMIISLNLSRN 710

Query: 414 QISK-LSEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
            +S  + E   NL +L  L LS NNL  ++P S+ NL  LK L L  N L+    E G  
Sbjct: 711 SLSGGIPEGFGNLTHLVYLDLSSNNLTGEIPESLANLSTLKHLRLASNHLKGHVPESGVF 770

Query: 472 KEL 474
           K +
Sbjct: 771 KNI 773


>gi|456972990|gb|EMG13268.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 379

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/335 (35%), Positives = 181/335 (54%), Gaps = 26/335 (7%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           LYL G KL +LP +IG + NL  L L EN L + P  +  L+ LRVL+L +N+L   P  
Sbjct: 53  LYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKTFPKE 112

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +L  LYL  N++ T+   I  L NL  L +  N++  LP E+G+LKNL  L+L +
Sbjct: 113 IGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNN 172

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L  LP+EIG    L TL+L +N+L+ +   +G L NL  L L+YN+L  +P  + +  
Sbjct: 173 NQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLK 232

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L    +    L +L    +  L ++  + L  N+F   P                 N+I
Sbjct: 233 NLQALELNNNQLKTLSKE-IGQLKNLKRLDLGYNQFKIIP-----------------NEI 274

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
           +++        +NL  + + +N LT+L  ++G    L EL L  NQ + L E+I  L NL
Sbjct: 275 EQL--------QNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTLPEEIGQLKNL 326

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           +VL L+NN LK L   IG L+ LK L+L+ N+L S
Sbjct: 327 QVLELNNNQLKTLSKEIGQLKNLKRLELDNNQLSS 361



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 112/335 (33%), Positives = 178/335 (53%), Gaps = 26/335 (7%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
            ++ LYL   ++ T+  +I  L NL  L++ +N +   P E+G+L+NL  L+L +N L+ 
Sbjct: 49  DVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKT 108

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
            PKEIG    L+ L L +N+L+ +   +G L NL  L L+YN+L  +P  + +  +L   
Sbjct: 109 FPKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQAL 168

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
            +    L +LP+ +                          Q  ++ ++N  +NQ+  +  
Sbjct: 169 ELNNNQLMTLPEEI-------------------------GQLKNLQTLNLWNNQLMTLSK 203

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
           GI  + KNL ++ +  N LT LP ++G    L  L L  NQ+  LS++I  L NL+ L L
Sbjct: 204 GI-GQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDL 262

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
             N  K +P+ I  L+ L+ L+L  N+L +L  EIG L+ LQ L L  NQ  +LP  IG 
Sbjct: 263 GYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTLPEEIGQ 322

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L NL  L +  N L+++ +EIG L+NL  L L++N
Sbjct: 323 LKNLQVLELNNNQLKTLSKEIGQLKNLKRLELDNN 357



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/339 (34%), Positives = 173/339 (51%), Gaps = 27/339 (7%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++  L +   K+  LP E+G+LKNL  L+L  N L   PKEIG    L  L+L +N+L  
Sbjct: 49  DVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKT 108

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
            P  +G      +  L+     +   TLSK +                      L ++  
Sbjct: 109 FPKEIGQ----LKNLLALYLNNNQLMTLSKGI--------------------GQLKNLQE 144

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L+ N+ T  P+    Q  ++ ++   +NQ+  +P  I  + KNL  +N+ +N L +L 
Sbjct: 145 LYLNYNQLTILPNE-IGQLKNLQALELNNNQLMTLPEEI-GQLKNLQTLNLWNNQLMTLS 202

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +G    L EL L  NQ++ L  +I  L NL+ L L+NN LK L   IG L+ LK LDL
Sbjct: 203 KGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDL 262

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+ + +PNEI  L+ LQ L L +NQL +L + IG L NL  L +  N   ++PEEIG 
Sbjct: 263 GYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTLPEEIGQ 322

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           L+NL  L LN+N  L  +  E+    NL+ + LDN  LS
Sbjct: 323 LKNLQVLELNNNQ-LKTLSKEIGQLKNLKRLELDNNQLS 360



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 131/231 (56%), Gaps = 1/231 (0%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           L   + +L +L+ELYL  N+L  LP++IG + NL  L L  N L +LP+ +  L+ L+ L
Sbjct: 132 LSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLKNLQTL 191

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           +L +N+L  L   + +L +L+ LYL +N++  +  +I  L NL  L + +N+++ L  E+
Sbjct: 192 NLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEI 251

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
           G+LKNL  LDL +N  + +P EI     L  L+L +N+L  +   +G L NL  L LSYN
Sbjct: 252 GQLKNLKRLDLGYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYN 311

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           +  ++PE + +  +L    +    L +L    +  L ++  + L  N+ ++
Sbjct: 312 QFTTLPEEIGQLKNLQVLELNNNQLKTLSKE-IGQLKNLKRLELDNNQLSS 361



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 127/245 (51%), Gaps = 4/245 (1%)

Query: 317 GCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIF 376
           G  L++LP  +   L +++++ L  N   A+P     Q  ++  +   +NQ+   P  I 
Sbjct: 57  GQKLTTLPKEI-GQLKNLHDLNLDENPLGAFPKE-IGQLENLRVLELNNNQLKTFPKEIG 114

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
                L+     + L+T L   +G    L EL L  NQ++ L  +I  L NL+ L L+NN
Sbjct: 115 QLKNLLALYLNNNQLMT-LSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNN 173

Query: 437 LLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
            L  LP  IG L+ L+ L+L  N+L +L   IG LK LQ L L  NQL  LP  IG L N
Sbjct: 174 QLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKN 233

Query: 497 LSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ 556
           L  L +  N L+++ +EIG L+NL  L L  N     IP E+    NLQ++ L+N  L+ 
Sbjct: 234 LQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQ-FKIIPNEIEQLQNLQVLELNNNQLTT 292

Query: 557 IPSEI 561
           +  EI
Sbjct: 293 LSKEI 297



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 167/360 (46%), Gaps = 60/360 (16%)

Query: 69  HPESNKPKPTTKKKEPIQADLNIEKEFLRCKE-----------ENILNLDLSKSSITHLP 117
             E  +PK      E IQ  L++   +L  ++           +N+ +L+L ++ +   P
Sbjct: 28  QTEKVEPKTYRDLTEAIQNPLDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFP 87

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGY-----------------------VTNLTCLGL 154
             + +L +L  L L  N+L + P +IG                        + NL  L L
Sbjct: 88  KEIGQLENLRVLELNNNQLKTFPKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYL 147

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
             N LT LP+ +  L+ L+ L+L +N+L  LP  + +L +L+ L L  N++ T+   I  
Sbjct: 148 NYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQ 207

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL  L +  N++  LP E+G+LKNL  L+L +N L+ L KEIG    L  LDL +N+ 
Sbjct: 208 LKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQF 267

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             IP+ +  L NL  L L+ N+L ++ + + +  +L E                      
Sbjct: 268 KIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQE---------------------- 305

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + LS N+FT  P     Q  ++  +   +NQ+  +   I  + KNL ++ + +N L+S
Sbjct: 306 --LYLSYNQFTTLPE-EIGQLKNLQVLELNNNQLKTLSKEI-GQLKNLKRLELDNNQLSS 361



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 94/157 (59%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L+ + +T LP  + +L +L+ L L  N+L +L  +IG + NL  L L  N   
Sbjct: 209 KNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFK 268

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            +P+ +  LQ L+VL+L +N+L  L   + +L +L+ LYL +N+  T+  +I  L NL +
Sbjct: 269 IIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTLPEEIGQLKNLQV 328

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L + +N+++ L  E+G+LKNL  L+L +N L    KE
Sbjct: 329 LELNNNQLKTLSKEIGQLKNLKRLELDNNQLSSEEKE 365



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 85/144 (59%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L+E IQN +++  L L+   L  LP  IG L+ L  L+L+EN L + P EIG L+ L+ L
Sbjct: 40  LTEAIQNPLDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVL 99

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L +NQL + P+ IG L NL  L +  N L ++ + IG L+NL  LYLN N  L  +P E
Sbjct: 100 ELNNNQLKTFPKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQ-LTILPNE 158

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    NLQ + L+N  L  +P EI
Sbjct: 159 IGQLKNLQALELNNNQLMTLPEEI 182


>gi|432885659|ref|XP_004074704.1| PREDICTED: protein LAP2-like [Oryzias latipes]
          Length = 1250

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 193/395 (48%), Gaps = 31/395 (7%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
           LR +EE + +LD S  S+  +P  +      L+ELYL  N++  LP Q+     L  L +
Sbjct: 16  LRGEEEVVTSLDYSHCSLETVPKEIFSFEKTLQELYLDANQIEELPKQLFNCQLLNRLSV 75

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRI--------- 205
            +N L  LP ++ANL  LR LD+  N + E P  +     L I+    NR+         
Sbjct: 76  PDNDLAVLPAAIANLINLRELDVSKNGIQEFPDSIKNCKGLTIVEASVNRMPKLPEGFTL 135

Query: 206 --------------KTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHL 251
                         + +      L+ L +L +R+N+++ LP  + +L  L  LDL  N  
Sbjct: 136 LLNLTQLYLNDGYLEFLPASFGRLAKLQILELRENQLQNLPKSMQKLTQLERLDLGSNEF 195

Query: 252 EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN 311
            E+P+ + + + +  L +  N+L  +P M+G L NL  L +S N LE V E +S C +L 
Sbjct: 196 TEVPEVLEHLSGIKELWMDGNKLTVLPAMVGKLKNLEYLDMSKNNLEMVDEQISGCENLQ 255

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQID 369
           +  +   AL+ LP   + SL  +  + +  N+    P   GG    T++  ++   N+I+
Sbjct: 256 DLLLSNNALTQLP-ASIGSLKKLTALKVDENQLMFLPDSVGG---LTAIDELDCSFNEIE 311

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
            +P  I  +   +       N LT LP ++G W  LT L L +N++  L E++ ++  L+
Sbjct: 312 ALPSSI-GQWVAIRTFAADHNFLTELPPEMGNWKNLTVLFLHSNKLESLPEEMGDMQKLK 370

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           V+ LSNN LK LP S   L ++  + L EN+ + L
Sbjct: 371 VINLSNNKLKNLPYSFTKLSEMTAMWLSENQSKPL 405



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 186/385 (48%), Gaps = 28/385 (7%)

Query: 175 LDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           LD  H  L  +P  ++    +L+ LYL  N+I+ +   +     L+ LS+ DN +  LP 
Sbjct: 26  LDYSHCSLETVPKEIFSFEKTLQELYLDANQIEELPKQLFNCQLLNRLSVPDNDLAVLPA 85

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
            +  L NL  LD++ N ++E P  I NC  L  ++   N +  +P+    L+NLT+L L+
Sbjct: 86  AIANLINLRELDVSKNGIQEFPDSIKNCKGLTIVEASVNRMPKLPEGFTLLLNLTQLYLN 145

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              LE +P +  +   L    +    L +LP  +   LT +  + L  N+FT  P     
Sbjct: 146 DGYLEFLPASFGRLAKLQILELRENQLQNLPKSM-QKLTQLERLDLGSNEFTEVPE---- 200

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
                                +      + ++ M  N LT LP  +G    L  L++  N
Sbjct: 201 ---------------------VLEHLSGIKELWMDGNKLTVLPAMVGKLKNLEYLDMSKN 239

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
            +  + E I    NL+ L+LSNN L +LP+SIG+L+KL  L ++EN+L  LP+ +G L  
Sbjct: 240 NLEMVDEQISGCENLQDLLLSNNALTQLPASIGSLKKLTALKVDENQLMFLPDSVGGLTA 299

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           +  L    N++ +LP +IG    +   +   N L  +P E+G  +NL  L+L+ N  L +
Sbjct: 300 IDELDCSFNEIEALPSSIGQWVAIRTFAADHNFLTELPPEMGNWKNLTVLFLHSNK-LES 358

Query: 534 IPFELALCSNLQIMSLDNCPLSQIP 558
           +P E+     L++++L N  L  +P
Sbjct: 359 LPEEMGDMQKLKVINLSNNKLKNLP 383



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 117/222 (52%), Gaps = 25/222 (11%)

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
            + NQI+++P  +F+  + L+++++ DN L  LP  +   + L EL++  N I +  + I
Sbjct: 52  LDANQIEELPKQLFN-CQLLNRLSVPDNDLAVLPAAIANLINLRELDVSKNGIQEFPDSI 110

Query: 423 QNLVNLEVLVLSNNLLKKLP-----------------------SSIGNLRKLKCLDLEEN 459
           +N   L ++  S N + KLP                       +S G L KL+ L+L EN
Sbjct: 111 KNCKGLTIVEASVNRMPKLPEGFTLLLNLTQLYLNDGYLEFLPASFGRLAKLQILELREN 170

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           +L++LP  +  L +L+RL L SN+   +P  + HL+ +  L +  N L  +P  +G L+N
Sbjct: 171 QLQNLPKSMQKLTQLERLDLGSNEFTEVPEVLEHLSGIKELWMDGNKLTVLPAMVGKLKN 230

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           L  L ++ N  L  +  +++ C NLQ + L N  L+Q+P+ I
Sbjct: 231 LEYLDMSKNN-LEMVDEQISGCENLQDLLLSNNALTQLPASI 271



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 1/204 (0%)

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           V S+++ H  ++ +P  IFS  K L ++ +  N +  LP  L     L  L++  N ++ 
Sbjct: 23  VTSLDYSHCSLETVPKEIFSFEKTLQELYLDANQIEELPKQLFNCQLLNRLSVPDNDLAV 82

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L   I NL+NL  L +S N +++ P SI N + L  ++   N++  LP     L  L +L
Sbjct: 83  LPAAIANLINLRELDVSKNGIQEFPDSIKNCKGLTIVEASVNRMPKLPEGFTLLLNLTQL 142

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L    L  LP + G L  L  L + EN LQ++P+ +  L  L  L L  N     +P  
Sbjct: 143 YLNDGYLEFLPASFGRLAKLQILELRENQLQNLPKSMQKLTQLERLDLGSNE-FTEVPEV 201

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           L   S ++ + +D   L+ +P+ +
Sbjct: 202 LEHLSGIKELWMDGNKLTVLPAMV 225



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 66/128 (51%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L + ++ +  LP SV  LT ++EL    N++ +LPS IG    +       N LT LP  
Sbjct: 280 LKVDENQLMFLPDSVGGLTAIDELDCSFNEIEALPSSIGQWVAIRTFAADHNFLTELPPE 339

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + N + L VL L  NKL  LP  +  +  LK++ L  N++K +      LS ++ + + +
Sbjct: 340 MGNWKNLTVLFLHSNKLESLPEEMGDMQKLKVINLSNNKLKNLPYSFTKLSEMTAMWLSE 399

Query: 226 NKIRELPP 233
           N+ + L P
Sbjct: 400 NQSKPLIP 407


>gi|395860098|ref|XP_003802352.1| PREDICTED: protein scribble homolog isoform 1 [Otolemur garnettii]
          Length = 1616

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 128/390 (32%), Positives = 196/390 (50%), Gaps = 6/390 (1%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++ ++D    S+  +P  + + +  LEEL L  N+L  LP     + NL  LG
Sbjct: 7   LWRCNR-HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N + E+P  +    +L+I     N +  +     
Sbjct: 66  LSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFT 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L +L+ L++ D  ++ LP ++G L NLVTL+L  N L+ LP  +     L  LDL  N+
Sbjct: 126 QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L  +PD LG L NL  L L  N+L ++P  L     L   +V    L  LP   L  L  
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELP-AELGGLVL 244

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ LS+N     P G   Q   +  +  + N++ ++P  I    +NLS++ + +NLLT
Sbjct: 245 LTDLLLSQNLLQRLPDGI-GQLKQLSILKVDQNRLCEVPEAIGD-CENLSELILTENLLT 302

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP  LG    LT LN+  N +  L  +I   V L VL L +N L  LP  + +  +L  
Sbjct: 303 ALPHSLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHV 362

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           LD+  N+L SLP  +  L  L+ L L  NQ
Sbjct: 363 LDVAGNRLRSLPFALTHLN-LKALWLAENQ 391



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 173/387 (44%), Gaps = 72/387 (18%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           +D RH  L  +P  +Y+                      Y  +L  L +  N++RELP  
Sbjct: 17  VDKRHCSLQAVPEEIYR----------------------YSRSLEELLLDANQLRELPKP 54

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
              L NL  L L+ N ++ LP E+ N   LV LD+  N   +IP+               
Sbjct: 55  FFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRN---DIPE--------------- 96

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
                +PE++  C  L   +  G  LS LPDG  + L S+ ++ L+     A P      
Sbjct: 97  -----IPESIKFCKALEIADFSGNPLSRLPDGF-TQLRSLAHLALNDVSLQALP------ 144

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
                              G      NL  + +++NLL SLP  L   V L +L+LG N 
Sbjct: 145 -------------------GDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +  L + +  L NL  L L  N L  LP  +GNLR+L CLD+ EN+LE LP E+G L  L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
             L+L  N L  LP  IG L  LS L V +N L  +PE IG  ENL  L L +N  L  +
Sbjct: 246 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVPEAIGDCENLSELILTEN-LLTAL 304

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEI 561
           P  L   + L  +++D   L  +P EI
Sbjct: 305 PHSLGKLTKLTNLNVDRNHLEVLPPEI 331



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 174/363 (47%), Gaps = 50/363 (13%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
            ++ LD+S++ I  +P S++    LE     GN L+ LP     + +L  L L + SL +
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + NL  L  L+LR N L  LP  +  L  L+ L L  N ++ +   +  L NL  L
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  LPPELG L+ LV LD++ N LEELP E+G   +L  L L  N L  +PD +
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGI 262

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  L+ L++  NRL  VPE +  C +L+E  +    L++LP   L  LT + N+ + R
Sbjct: 263 GQLKQLSILKVDQNRLCEVPEAIGDCENLSELILTENLLTALPHS-LGKLTKLTNLNVDR 321

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N                                                 L  LP ++G 
Sbjct: 322 NH------------------------------------------------LEVLPPEIGG 333

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
            V L+ L+L  N+++ L  ++ +   L VL ++ N L+ LP ++ +L  LK L L EN+ 
Sbjct: 334 CVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHL-NLKALWLAENQA 392

Query: 462 ESL 464
           + +
Sbjct: 393 QPM 395


>gi|383856855|ref|XP_003703922.1| PREDICTED: LOW QUALITY PROTEIN: protein lap4-like [Megachile
           rotundata]
          Length = 2047

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 191/394 (48%), Gaps = 28/394 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           +Q+  +D RH  L  +P  + + + SL+ L L  N I  +  +   L  L  L + DN I
Sbjct: 13  RQVEYVDKRHCSLVSVPDDILRYSRSLEELLLDANHISDLPKNFFRLQRLRKLGLSDNDI 72

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
             LPP++   +NLV LD++ N + ++P+ I N   L   D   N +  +P     L NLT
Sbjct: 73  HRLPPDIQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLT 132

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L L+   L ++P        L    +    L +LP+ L S L  +  + L  N     P
Sbjct: 133 VLGLNDMSLTNLPPDFGSLEALQSLELRENLLKTLPESL-SKLYKLERLDLGDNDIDVLP 191

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
           +                  I K+P         L ++ +  N L  LP +LG    L  L
Sbjct: 192 A-----------------HIGKLPA--------LQELWLDHNQLQHLPPELGQLKTLACL 226

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++  L E+I  L +L  L LS N+++KLP  +G L+KL  L +++N+L +L   I
Sbjct: 227 DVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELKKLTILKVDQNRLSTLNPNI 286

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + LQ LIL  N L  LP  IG L NL+ L+V  N+LQS+P EIG L+ L  L L DN
Sbjct: 287 GSCENLQELILTENFLFELPSTIGKLLNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDN 346

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             L  +P E+  C+ L ++ +    L  +P  ++
Sbjct: 347 K-LQYLPVEVGQCTALHVLDVSGNRLQYLPYSLI 379



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 191/403 (47%), Gaps = 50/403 (12%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  + I+ LP +  +L  L +L L  N +  LP  I    NL  L ++ N +  +P+++ 
Sbjct: 44  LDANHISDLPKNFFRLQRLRKLGLSDNDIHRLPPDIQNFENLVELDVSRNDIPDIPENIK 103

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
           NL+ L+V D   N +  LP    +L +L +L L    +  + PD   L  L  L +R+N 
Sbjct: 104 NLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENL 163

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           ++ LP  L +L  L  LDL  N ++ LP  IG    L  L L HN+L ++P  LG L  L
Sbjct: 164 LKTLPESLSKLYKLERLDLGDNDIDVLPAHIGKLPALQELWLDHNQLQHLPPELGQLKTL 223

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L +S NRLE +PE +                     G L SLT ++            
Sbjct: 224 ACLDVSENRLEDLPEEI---------------------GGLESLTDLH------------ 250

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
                             N I+K+P G+    K L+ + +  N L++L  ++G+   L E
Sbjct: 251 ---------------LSQNVIEKLPDGL-GELKKLTILKVDQNRLSTLNPNIGSCENLQE 294

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           L L  N + +L   I  L+NL  L +  N L+ LP+ IGNL++L  L L +NKL+ LP E
Sbjct: 295 LILTENFLFELPSTIGKLLNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPVE 354

Query: 468 IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           +G    L  L +  N+L  LP ++ +L NL  + + EN  Q +
Sbjct: 355 VGQCTALHVLDVSGNRLQYLPYSLINL-NLKAVWLSENQAQPM 396



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 173/336 (51%), Gaps = 27/336 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN++ LD+S++ I  +P +++ L  L+      N +  LP+    + NLT LGL + SLT
Sbjct: 83  ENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLT 142

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP    +L+ L+ L+LR N L  LP  + KL  L+ L L  N I  +   I  L  L  
Sbjct: 143 NLPPDFGSLEALQSLELRENLLKTLPESLSKLYKLERLDLGDNDIDVLPAHIGKLPALQE 202

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N+++ LPPELG+LK L  LD++ N LE+LP+EIG    L  L L  N +  +PD 
Sbjct: 203 LWLDHNQLQHLPPELGQLKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDG 262

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           LG L  LT L++  NRL ++   +  C +L E  +    L  LP   +  L ++NN+ + 
Sbjct: 263 LGELKKLTILKVDQNRLSTLNPNIGSCENLQELILTENFLFELP-STIGKLLNLNNLNVD 321

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           RN   + P+                 +I  +        K L  ++++DN L  LP+++G
Sbjct: 322 RNSLQSLPT-----------------EIGNL--------KQLGVLSLRDNKLQYLPVEVG 356

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
               L  L++  N++  L   + NL NL+ + LS N
Sbjct: 357 QCTALHVLDVSGNRLQYLPYSLINL-NLKAVWLSEN 391



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 31/376 (8%)

Query: 90  NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
           ++ K F R   + +  L LS + I  LPP ++   +L EL +  N +  +P  I  +  L
Sbjct: 51  DLPKNFFRL--QRLRKLGLSDNDIHRLPPDIQNFENLVELDVSRNDIPDIPENIKNLRAL 108

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
                + N +  LP     L+ L VL L    L  LP     L +L+ L LR N +KT+ 
Sbjct: 109 QVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLKTLP 168

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
             +  L  L  L + DN I  LP  +G+L  L  L L HN L+ LP E+G    L  LD+
Sbjct: 169 ESLSKLYKLERLDLGDNDIDVLPAHIGKLPALQELWLDHNQLQHLPPELGQLKTLACLDV 228

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSL-PDGLL 328
             N L ++P+ +G L +LT L LS N +E +P+ L +   L    V+   LS+L P+  +
Sbjct: 229 SENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELKKLTILKVDQNRLSTLNPN--I 286

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
            S  ++  + L+ N     PS                            +  NL+ +N+ 
Sbjct: 287 GSCENLQELILTENFLFELPS-------------------------TIGKLLNLNNLNVD 321

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
            N L SLP ++G    L  L+L  N++  L  ++     L VL +S N L+ LP S+ NL
Sbjct: 322 RNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPVEVGQCTALHVLDVSGNRLQYLPYSLINL 381

Query: 449 RKLKCLDLEENKLESL 464
             LK + L EN+ + +
Sbjct: 382 -NLKAVWLSENQAQPM 396


>gi|62079263|ref|NP_001014290.1| leucine-rich repeat-containing protein 1 [Rattus norvegicus]
 gi|50925909|gb|AAH79423.1| Leucine rich repeat containing 1 [Rattus norvegicus]
          Length = 524

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 195/390 (50%), Gaps = 28/390 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + +  +D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN++
Sbjct: 12  RHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEV 71

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LPPE+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLT 131

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L ++   L+S+PE +    +L    +    L+ LPD L                     
Sbjct: 132 CLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL--------------------- 170

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
               TQ   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L
Sbjct: 171 ----TQLRRLEELDLGNNEIYSLPESIGALL-HLKDLWLDGNQLSELPQEIGNLRNLLCL 225

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L E+I  L++L  LV+S NLL+ +P  IG L+KL  L L++N+L  LP  I
Sbjct: 226 DVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAI 285

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           G  + L  L+L  N+L++LP +IG L  L+ L+   N L S+P+EIG   +L    + DN
Sbjct: 286 GDCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFCIRDN 345

Query: 529 TCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L  IP E++    L ++ +    L  +P
Sbjct: 346 R-LTRIPSEVSQAMELHVLDVAGNRLHHLP 374



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 195/405 (48%), Gaps = 28/405 (6%)

Query: 125 HLEELYLYGNKLASLPSQI-GYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLN 183
           H+E +      L  +P +I  Y  +L  L L  N L  LP+    L +LR L L  N++ 
Sbjct: 13  HVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEVQ 72

Query: 184 ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVT 243
            LP  +     L  L +  N I  +   I +   L +     N +  LP    EL+NL  
Sbjct: 73  RLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTC 132

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L +    L+ LP+ IGN   L +L+L+ N L  +PD L  L  L  L L  N + S+PE+
Sbjct: 133 LSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPES 192

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           +   +HL +  ++G  LS LP         I N+   RN               +  ++ 
Sbjct: 193 IGALLHLKDLWLDGNQLSELPQ-------EIGNL---RN---------------LLCLDV 227

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
             N+++++P  I S   +L+ + +  NLL ++P  +G    L+ L L  N++++L E I 
Sbjct: 228 SENRLERLPEEI-SGLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAIG 286

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           +  NL  LVL+ N L  LP+SIG L+KL  L+ + NKL SLP EIG    L    ++ N+
Sbjct: 287 DCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFCIRDNR 346

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L  +P  +     L  L V  N L  +P  + TL+ L  L+L+DN
Sbjct: 347 LTRIPSEVSQAMELHVLDVAGNRLHHLPLSLTTLK-LKALWLSDN 390



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 201/434 (46%), Gaps = 55/434 (12%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++  +D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LG
Sbjct: 7   LWRCNR-HVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFN---RIKTVHP 210
           L++N +  LP  +AN  QL  LD+  N + E+P  +    +L++     N   R+    P
Sbjct: 66  LSDNEVQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 211 DIQYLS--------------------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
           ++Q L+                    NL+ L +R+N +  LP  L +L+ L  LDL +N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           +  LP+ IG    L  L L  N+L  +P  +GNL NL  L +S NRLE +PE +S  + L
Sbjct: 186 IYSLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISL 245

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK 370
            +  V    L ++PDG+                          +   +  +  + N++ +
Sbjct: 246 TDLVVSQNLLETVPDGI-------------------------GKLKKLSILKLDQNRLTQ 280

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           +P  I    +NL+++ + +N L +LP  +G    L  LN   N++  L ++I    +L V
Sbjct: 281 LPEAI-GDCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTV 339

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ---LVSL 487
             + +N L ++PS +    +L  LD+  N+L  LP  +  LK L+ L L  NQ   L++ 
Sbjct: 340 FCIRDNRLTRIPSEVSQAMELHVLDVAGNRLHHLPLSLTTLK-LKALWLSDNQSQPLLTF 398

Query: 488 PRAIGHLTNLSYLS 501
              + H T    L+
Sbjct: 399 QTDVDHTTGEKILT 412



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 178/376 (47%), Gaps = 81/376 (21%)

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
           +Y  +L  L +  N++RELP +  +L  L  L L+ N ++ LP EI N   LV LD+  N
Sbjct: 33  RYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEVQRLPPEIANFMQLVELDVSRN 92

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGL--LSS 330
              +IP+                    +PE++S C  L   +  G  L+ LP+    L +
Sbjct: 93  ---DIPE--------------------IPESISFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 331 LT--SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
           LT  S+N+I+L            P    ++Y                     NL+ + ++
Sbjct: 130 LTCLSVNDISLQ---------SLPENIGNLY---------------------NLASLELR 159

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
           +NLLT LP  L     L EL+LG N+I  L E I  L++L+ L L  N L +LP  IGNL
Sbjct: 160 ENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEIGNL 219

Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLIL-----------------------QSNQLV 485
           R L CLD+ EN+LE LP EI  L  L  L++                         N+L 
Sbjct: 220 RNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLT 279

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
            LP AIG   NL+ L + EN L ++P  IG L+ L+ L  + N  L ++P E+  C +L 
Sbjct: 280 QLPEAIGDCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNK-LVSLPKEIGGCCSLT 338

Query: 546 IMSLDNCPLSQIPSEI 561
           +  + +  L++IPSE+
Sbjct: 339 VFCIRDNRLTRIPSEV 354


>gi|359751197|emb|CCF03501.1| receptor kinase [Arabidopsis lyrata]
          Length = 1162

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 163/486 (33%), Positives = 242/486 (49%), Gaps = 51/486 (10%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-L 162
           LDL+ ++ T  +P  + KLT L EL LY N    S+PS+I  + NL  L L  N LT  +
Sbjct: 101 LDLTSNNFTGEIPAEIGKLTELNELSLYLNYFSGSIPSEIWELKNLMSLDLRNNLLTGDV 160

Query: 163 PDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSM 220
           P ++   + L V+ + +N L   +P  +  L  L++     NR+    P  +  L NL+ 
Sbjct: 161 PKAICKTRTLVVVGVGNNNLTGNIPDCLGDLVHLEVFVADINRLSGSIPVTVGTLVNLTN 220

Query: 221 LSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-I 277
           L +  N++   +P E+G L N+  L L  N LE E+P EIGNCT L+ L+L  N+L   I
Sbjct: 221 LDLSGNQLTGRIPREIGNLLNIQALVLFDNLLEGEIPAEIGNCTTLIDLELYGNQLTGRI 280

Query: 278 PDMLGNLINLTRLRLSYNRL-ESVPETLSKCVHLNEFNV-EGCALSSLPDGLLSSLTSIN 335
           P  LGNL+ L  LRL  N L  S+P +L +   L    + E   +  +P+  + SL S+ 
Sbjct: 281 PAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLRYLGLSENQLVGPIPEE-IGSLKSLQ 339

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI-DKIPY--GIFSRAKNLSKVNMKDNLL 392
            +TL  N  T       T   ++  +    N I  ++P   G+ +  +NLS     DN L
Sbjct: 340 VLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGELPADLGLLTNLRNLSA---HDNHL 396

Query: 393 TS-------------------------LPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLV 426
           T                          +P  LG+ + LT L+LG N+ + ++ +DI N  
Sbjct: 397 TGPIPSSISNCTGLKLLDLSFNKMTGKIPWGLGS-LNLTALSLGPNRFTGEIPDDIFNCS 455

Query: 427 NLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQL 484
           N+E L L+ NNL   L   IG L+KL+   +  N L   +P EIG L+EL  L L SN+ 
Sbjct: 456 NMETLNLAGNNLTGTLKPLIGKLKKLRIFQVSSNSLTGKIPGEIGNLRELILLYLHSNRF 515

Query: 485 V-SLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
             ++PR I +LT L  L +  N+L+  IPEE+  +  L  L L+ N     IP   AL S
Sbjct: 516 TGTIPREISNLTLLQGLGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIP---ALFS 572

Query: 543 NLQIMS 548
            LQ ++
Sbjct: 573 KLQSLT 578



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 138/429 (32%), Positives = 204/429 (47%), Gaps = 84/429 (19%)

Query: 162 LPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           L  ++ANL  L+VLDL  N    E+P  + KLT L  L L  N          Y S    
Sbjct: 88  LSPAIANLTYLQVLDLTSNNFTGEIPAEIGKLTELNELSLYLN----------YFSG--- 134

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELV-NIP 278
                     +P E+ ELKNL++LDL +N L  ++PK I     LV + + +N L  NIP
Sbjct: 135 ---------SIPSEIWELKNLMSLDLRNNLLTGDVPKAICKTRTLVVVGVGNNNLTGNIP 185

Query: 279 DMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           D LG+L++L       NRL  S+P T+   V+L                         N+
Sbjct: 186 DCLGDLVHLEVFVADINRLSGSIPVTVGTLVNL------------------------TNL 221

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS-LP 396
            LS N+ T                        +IP  I     N+  + + DNLL   +P
Sbjct: 222 DLSGNQLTG-----------------------RIPREI-GNLLNIQALVLFDNLLEGEIP 257

Query: 397 LDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVL-SNNLLKKLPSSIGNLRKLKCL 454
            ++G    L +L L  NQ++ ++  ++ NLV LE L L  NNL   LPSS+  L +L+ L
Sbjct: 258 AEIGNCTTLIDLELYGNQLTGRIPAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLRYL 317

Query: 455 DLEENKLES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IP 511
            L EN+L   +P EIG LK LQ L L SN L    P++I +L NL+ +++G N +   +P
Sbjct: 318 GLSENQLVGPIPEEIGSLKSLQVLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGELP 377

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIR 571
            ++G L NL  L  +DN     IP  ++ C+ L+++ L     +++  +I  G  SL + 
Sbjct: 378 ADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLKLLDLS---FNKMTGKIPWGLGSLNLT 434

Query: 572 YLKMQGPYR 580
            L + GP R
Sbjct: 435 ALSL-GPNR 442



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 220/473 (46%), Gaps = 43/473 (9%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSL-TSLPDSLANLQQLR 173
           +P  +   T L +L LYGN+L   +P+++G +  L  L L  N+L +SLP SL  L +LR
Sbjct: 256 IPAEIGNCTTLIDLELYGNQLTGRIPAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLR 315

Query: 174 VLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIR-E 230
            L L  N+L   +P  +  L SL++L L  N +    P  I  L NL++++M  N I  E
Sbjct: 316 YLGLSENQLVGPIPEEIGSLKSLQVLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGE 375

Query: 231 LPPELGELKNLVTLDLAHNHLEE-LPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLT 288
           LP +LG L NL  L    NHL   +P  I NCT L  LDL  N++   IP  LG+L NLT
Sbjct: 376 LPADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLKLLDLSFNKMTGKIPWGLGSL-NLT 434

Query: 289 RLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            L L  NR    +P+ +  C ++   N+ G  L+     L+  L  +    +S N  T  
Sbjct: 435 ALSLGPNRFTGEIPDDIFNCSNMETLNLAGNNLTGTLKPLIGKLKKLRIFQVSSNSLTG- 493

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLT 406
                                 KIP G     + L  + +  N  T ++P ++     L 
Sbjct: 494 ----------------------KIP-GEIGNLRELILLYLHSNRFTGTIPREISNLTLLQ 530

Query: 407 ELNLGTNQI-SKLSEDIQNLVNLEVLVLSNNLLKK-LPSSIGNLRKLKCLDLEENKLE-S 463
            L L  N +   + E++ +++ L  L LS+N     +P+    L+ L  L L  NK   S
Sbjct: 531 GLGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIPALFSKLQSLTYLGLHGNKFNGS 590

Query: 464 LPNEIGFLKELQRLILQSNQLV-SLPRAI-GHLTNLS-YLSVGENNLQ-SIPEEIGTLEN 519
           +P  +  L  L    +  N L  ++P  +   + N+  YL+   N L  +I  E+G LE 
Sbjct: 591 IPASLKSLSLLNTFDISDNLLTGTIPEELLSSMKNMQLYLNFSNNFLTGTISNELGKLEM 650

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS-QIPSEIV-VGGPSLII 570
           +  +  ++N    +IP  L  C N+  +      LS QIP E+   GG  +II
Sbjct: 651 VQEIDFSNNLFSGSIPRSLKACKNVFTLDFSRNNLSGQIPDEVFHQGGMDMII 703



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 194/431 (45%), Gaps = 65/431 (15%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
            P S+  L +L  + +  N ++  LP+ +G +TNL  L   +N LT  +P S++N   L+
Sbjct: 352 FPQSITNLRNLTVMTMGFNYISGELPADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLK 411

Query: 174 VLDLRHNKL------------------------NELPMVVYKLTSLKILYLRFNRI-KTV 208
           +LDL  NK+                         E+P  ++  ++++ L L  N +  T+
Sbjct: 412 LLDLSFNKMTGKIPWGLGSLNLTALSLGPNRFTGEIPDDIFNCSNMETLNLAGNNLTGTL 471

Query: 209 HPDIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVT 266
            P I  L  L +  +  N +  ++P E+G L+ L+ L L  N     +P+EI N T+L  
Sbjct: 472 KPLIGKLKKLRIFQVSSNSLTGKIPGEIGNLRELILLYLHSNRFTGTIPREISNLTLLQG 531

Query: 267 LDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE-------------------------SV 300
           L L  N+L   IP+ + +++ L+ L LS N+                           S+
Sbjct: 532 LGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIPALFSKLQSLTYLGLHGNKFNGSI 591

Query: 301 PETLSKCVHLNEFNVEGCALS-SLPDGLLSSLTSIN-NITLSRNKFTAYPSGGPTQFTSV 358
           P +L     LN F++    L+ ++P+ LLSS+ ++   +  S N  T   S    +   V
Sbjct: 592 PASLKSLSLLNTFDISDNLLTGTIPEELLSSMKNMQLYLNFSNNFLTGTISNELGKLEMV 651

Query: 359 YSINFEHNQID-KIPYGIFSRAKNLSKVNM-KDNLLTSLPLDL---GTWVGLTELNLGTN 413
             I+F +N     IP  +    KN+  ++  ++NL   +P ++   G    +  LNL  N
Sbjct: 652 QEIDFSNNLFSGSIPRSL-KACKNVFTLDFSRNNLSGQIPDEVFHQGGMDMIISLNLSRN 710

Query: 414 QISK-LSEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
            +S  + E   NL +L  L LS NNL  ++P S+  L  LK L L  N L+    E G  
Sbjct: 711 SLSGGIPEGFGNLTHLVSLDLSSNNLTGEIPESLAYLSTLKHLKLASNHLKGHVPESGVF 770

Query: 472 KELQRLILQSN 482
           K +    L  N
Sbjct: 771 KNINASDLMGN 781


>gi|421137163|ref|ZP_15597251.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410018657|gb|EKO85494.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
          Length = 313

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/304 (34%), Positives = 158/304 (51%), Gaps = 26/304 (8%)

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           +++  LP  +G  +NL  L+L  N L  LPKEIG    L  L+L  N+  ++P  +G L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           NL RL L  N+  S+P+ + +  +L   N+ G  L+SLP  +   L ++  + L  N+FT
Sbjct: 64  NLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEI-GQLQNLERLDLDGNQFT 122

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
           + P                             + +NL  +N+  N LTSLP ++G    L
Sbjct: 123 SLPKE-------------------------IGQLQNLRVLNLAGNQLTSLPKEIGQLQNL 157

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLP 465
             L+L  NQ + L ++I  L  LE L L +N     P  I   + LK L L  ++L++LP
Sbjct: 158 ERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLP 217

Query: 466 NEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
            EI  L+ LQ L L SNQL SLP+ IG L NL  L++ +N L+++P+EIG L+ L  L L
Sbjct: 218 KEILLLQNLQSLHLDSNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRL 277

Query: 526 NDNT 529
             N+
Sbjct: 278 YSNS 281



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 160/315 (50%), Gaps = 27/315 (8%)

Query: 113 ITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQL 172
           +  LP  +    +LE+L L GN+L SLP +IG + NL  L LA N  TSLP  +  LQ L
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNL 65

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
             LDL  N+   LP  + +L +L++L L  N++ ++  +I  L NL  L +  N+   LP
Sbjct: 66  ERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQFTSLP 125

Query: 233 PELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRL 292
            E+G+L+NL  L+LA N L  LPKEIG    L  LDL  N+  ++P  +G L  L  L L
Sbjct: 126 KEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNL 185

Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
            +NR    P+ + +   L    + G  L +LP  +L                        
Sbjct: 186 DHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILL----------------------- 222

Query: 353 TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGT 412
               ++ S++ + NQ+  +P  I  + +NL ++N++DN L +LP ++G    L  L L +
Sbjct: 223 --LQNLQSLHLDSNQLTSLPKEI-GQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLYS 279

Query: 413 NQIS-KLSEDIQNLV 426
           N  S K  + IQ L+
Sbjct: 280 NSFSLKEKQKIQELL 294



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 159/303 (52%), Gaps = 26/303 (8%)

Query: 134 NKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLT 193
           ++L SLP  IG   NL  L L  N LTSLP  +  LQ LRVL+L  N+   LP  + +L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
           +L+ L L  N+  ++  +I  L NL +L++  N++  LP E+G+L+NL  LDL  N    
Sbjct: 64  NLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQFTS 123

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
           LPKEIG    L  L+L  N+L ++P  +G L NL RL L+ N+  S+P+ +         
Sbjct: 124 LPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEI--------- 174

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
                       G L  L ++N   L  N+FT +P     Q  S+  +    +Q+  +P 
Sbjct: 175 ------------GQLQKLEALN---LDHNRFTIFPKEIRQQ-QSLKWLRLSGDQLKTLPK 218

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
            I    +NL  +++  N LTSLP ++G    L ELNL  N++  L ++I  L  LEVL L
Sbjct: 219 EIL-LLQNLQSLHLDSNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRL 277

Query: 434 SNN 436
            +N
Sbjct: 278 YSN 280



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 138/248 (55%), Gaps = 1/248 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + +T LP  + +L +L  L L GN+  SLP +IG + NL  L L  N  T
Sbjct: 17  QNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFT 76

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           SLP  +  LQ LRVL+L  N+L  LP  + +L +L+ L L  N+  ++  +I  L NL +
Sbjct: 77  SLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRV 136

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  N++  LP E+G+L+NL  LDLA N    LPKEIG    L  L+L HN     P  
Sbjct: 137 LNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKE 196

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +    +L  LRLS ++L+++P+ +    +L   +++   L+SLP   +  L ++  + L 
Sbjct: 197 IRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKE-IGQLQNLFELNLQ 255

Query: 341 RNKFTAYP 348
            NK    P
Sbjct: 256 DNKLKTLP 263



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 152/270 (56%), Gaps = 4/270 (1%)

Query: 292 LSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGG 351
           +  + LES+P  +    +L + N++G  L+SLP   +  L ++  + L+ N+FT+ P   
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKE-IGQLQNLRVLNLAGNQFTSLPK-E 58

Query: 352 PTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLG 411
             Q  ++  ++ + NQ   +P  I  + +NL  +N+  N LTSLP ++G    L  L+L 
Sbjct: 59  IGQLQNLERLDLDGNQFTSLPKEI-GQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLD 117

Query: 412 TNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
            NQ + L ++I  L NL VL L+ N L  LP  IG L+ L+ LDL  N+  SLP EIG L
Sbjct: 118 GNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQL 177

Query: 472 KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
           ++L+ L L  N+    P+ I    +L +L +  + L+++P+EI  L+NL +L+L+ N  L
Sbjct: 178 QKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQ-L 236

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            ++P E+    NL  ++L +  L  +P EI
Sbjct: 237 TSLPKEIGQLQNLFELNLQDNKLKTLPKEI 266



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 43/75 (57%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS   +  LP  +  L +L+ L+L  N+L SLP +IG + NL  L L +N L +LP  
Sbjct: 206 LRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKE 265

Query: 166 LANLQQLRVLDLRHN 180
           +  LQ+L VL L  N
Sbjct: 266 IGQLQKLEVLRLYSN 280


>gi|395860100|ref|XP_003802353.1| PREDICTED: protein scribble homolog isoform 2 [Otolemur garnettii]
          Length = 1641

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 128/390 (32%), Positives = 196/390 (50%), Gaps = 6/390 (1%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++ ++D    S+  +P  + + +  LEEL L  N+L  LP     + NL  LG
Sbjct: 7   LWRCNR-HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N + E+P  +    +L+I     N +  +     
Sbjct: 66  LSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFT 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L +L+ L++ D  ++ LP ++G L NLVTL+L  N L+ LP  +     L  LDL  N+
Sbjct: 126 QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L  +PD LG L NL  L L  N+L ++P  L     L   +V    L  LP   L  L  
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELP-AELGGLVL 244

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ LS+N     P G   Q   +  +  + N++ ++P  I    +NLS++ + +NLLT
Sbjct: 245 LTDLLLSQNLLQRLPDGI-GQLKQLSILKVDQNRLCEVPEAIGD-CENLSELILTENLLT 302

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP  LG    LT LN+  N +  L  +I   V L VL L +N L  LP  + +  +L  
Sbjct: 303 ALPHSLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHV 362

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           LD+  N+L SLP  +  L  L+ L L  NQ
Sbjct: 363 LDVAGNRLRSLPFALTHLN-LKALWLAENQ 391



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 173/387 (44%), Gaps = 72/387 (18%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           +D RH  L  +P  +Y+                      Y  +L  L +  N++RELP  
Sbjct: 17  VDKRHCSLQAVPEEIYR----------------------YSRSLEELLLDANQLRELPKP 54

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
              L NL  L L+ N ++ LP E+ N   LV LD+  N   +IP+               
Sbjct: 55  FFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRN---DIPE--------------- 96

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
                +PE++  C  L   +  G  LS LPDG  + L S+ ++ L+     A P      
Sbjct: 97  -----IPESIKFCKALEIADFSGNPLSRLPDGF-TQLRSLAHLALNDVSLQALP------ 144

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
                              G      NL  + +++NLL SLP  L   V L +L+LG N 
Sbjct: 145 -------------------GDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +  L + +  L NL  L L  N L  LP  +GNLR+L CLD+ EN+LE LP E+G L  L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
             L+L  N L  LP  IG L  LS L V +N L  +PE IG  ENL  L L +N  L  +
Sbjct: 246 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVPEAIGDCENLSELILTEN-LLTAL 304

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEI 561
           P  L   + L  +++D   L  +P EI
Sbjct: 305 PHSLGKLTKLTNLNVDRNHLEVLPPEI 331



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 174/363 (47%), Gaps = 50/363 (13%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
            ++ LD+S++ I  +P S++    LE     GN L+ LP     + +L  L L + SL +
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + NL  L  L+LR N L  LP  +  L  L+ L L  N ++ +   +  L NL  L
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  LPPELG L+ LV LD++ N LEELP E+G   +L  L L  N L  +PD +
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGI 262

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  L+ L++  NRL  VPE +  C +L+E  +    L++LP   L  LT + N+ + R
Sbjct: 263 GQLKQLSILKVDQNRLCEVPEAIGDCENLSELILTENLLTALPHS-LGKLTKLTNLNVDR 321

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N                                                 L  LP ++G 
Sbjct: 322 NH------------------------------------------------LEVLPPEIGG 333

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
            V L+ L+L  N+++ L  ++ +   L VL ++ N L+ LP ++ +L  LK L L EN+ 
Sbjct: 334 CVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHL-NLKALWLAENQA 392

Query: 462 ESL 464
           + +
Sbjct: 393 QPM 395


>gi|320162887|gb|EFW39786.1| protein kinase C delta-PA [Capsaspora owczarzaki ATCC 30864]
          Length = 1301

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 218/436 (50%), Gaps = 24/436 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +DLS++ I  +PP + KL++L  L ++ N+L++LP+++  +  LT L LA N   +LP  
Sbjct: 265 IDLSRNQIRAIPPGISKLSNLRILAVHNNQLSTLPNELSTLNKLTTLVLAFNDFATLPPV 324

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  L +L  L L  N L  LP  +  LT L +L +RFN++ ++   +  L +L+ + +R 
Sbjct: 325 ICQLVELHQLILTSNALEVLPDGIGNLTKLTLLDVRFNKLSSLPASMSRLVSLTRIDIRQ 384

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N +++ PP L  L  L TLD+  N+    P         + + L   + +  P+     +
Sbjct: 385 NPLQQFPPVLANLPKLETLDIGPNNFARAPA--------LDVALPALKTIRAPEAFLGSL 436

Query: 286 N-------LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
           N       LT++ L+ N L S+PE +    +L    V+   L SLP  +  ++ ++  + 
Sbjct: 437 NFTVLPQMLTKINLTDNGLTSLPEAIGDLPNLESLIVKNNQLRSLPAKIF-AIPTLKWLY 495

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL- 397
            + N+    P         ++ +  +HN++ K+P  +         +N+ +N+LT LP  
Sbjct: 496 AAYNQIEVLPEKFAKCLIQIFEV--QHNRLQKLPDKLLKFCYMTRVLNVSNNMLTELPAL 553

Query: 398 -DLGTWVGLTELNLGTNQISKLSED-IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
            D      + EL +G N+++    D I  ++ L +L +S N L  +  +I  L +L  L+
Sbjct: 554 SDTDELNAVEELYVGQNRLNDAQVDKITGMLKLRILDVSYNGLTAVSGNISRLTELGTLN 613

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           +  NKL  LP  I  LK+L+ ++  SN+L  LP       +L +L +G N L +IP  + 
Sbjct: 614 VAGNKLTELPRSINRLKKLKYVLANSNKLRDLPPLP---ESLVHLDLGCNRLAAIPASVR 670

Query: 516 TLENLHTLYLNDNTCL 531
            L  L  L ++ NT L
Sbjct: 671 ALPVLELLDVSGNTKL 686



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 187/408 (45%), Gaps = 50/408 (12%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C+   +  L L+ +++  LP  +  LT L  L +  NKL+SLP+ +  + +LT + + +N
Sbjct: 326 CQLVELHQLILTSNALEVLPDGIGNLTKLTLLDVRFNKLSSLPASMSRLVSLTRIDIRQN 385

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L   P  LANL +L  LD+  N     P +   L +L          KT+     +L +
Sbjct: 386 PLQQFPPVLANLPKLETLDIGPNNFARAPALDVALPAL----------KTIRAPEAFLGS 435

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L+   +         P++     L  ++L  N L  LP+ IG+   L +L +++N+L ++
Sbjct: 436 LNFTVL---------PQM-----LTKINLTDNGLTSLPEAIGDLPNLESLIVKNNQLRSL 481

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  +  +  L  L  +YN++E +PE  +KC+ +  F V+   L  LPD LL        +
Sbjct: 482 PAKIFAIPTLKWLYAAYNQIEVLPEKFAKCL-IQIFEVQHNRLQKLPDKLLKFCYMTRVL 540

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
            +S N  T  P+   T          E N ++++  G      N ++V+    +L     
Sbjct: 541 NVSNNMLTELPALSDTD---------ELNAVEELYVG--QNRLNDAQVDKITGMLK---- 585

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
                  L  L++  N ++ +S +I  L  L  L ++ N L +LP SI  L+KLK +   
Sbjct: 586 -------LRILDVSYNGLTAVSGNISRLTELGTLNVAGNKLTELPRSINRLKKLKYVLAN 638

Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
            NKL  LP      + L  L L  N+L ++P ++  L  L  L V  N
Sbjct: 639 SNKLRDLPP---LPESLVHLDLGCNRLAAIPASVRALPVLELLDVSGN 683


>gi|91094303|ref|XP_971940.1| PREDICTED: similar to Lap1 CG10255-PA [Tribolium castaneum]
 gi|270014406|gb|EFA10854.1| hypothetical protein TcasGA2_TC001631 [Tribolium castaneum]
          Length = 692

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 131/425 (30%), Positives = 221/425 (52%), Gaps = 24/425 (5%)

Query: 167 ANLQQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
            N +++  LD     ++E+P+ VY  + +L++L+L  N++K + P +    +L  L++ D
Sbjct: 11  TNQEKIVELDYSRCGISEVPVDVYNNSPTLEVLHLEGNKLKDLSPQLFQCIDLRYLNVSD 70

Query: 226 NKIRELPPELGELKNLVTLDLAHNHL--EELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
           N+IR +PP + +L +L  L  + N L  E +   I     L  LDL  N+L  +P+ + +
Sbjct: 71  NEIRSIPPLISKLNSLQVLIFSKNALVLEGVSPNIDKLNKLTILDLSMNDLGKVPEAIMS 130

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           LINL +L L+   ++ VP  + +  +L    +   +L  LP  +   LT++  + +S N 
Sbjct: 131 LINLQQLCLNDTGIDYVPANIGRLSNLRILELRDNSLRELPKSI-RRLTNLQRLDVSDNN 189

Query: 344 FTAYPSGGPTQFTSV-------YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
            +        Q T V         +    N I K+   I +  K ++  +   N L ++P
Sbjct: 190 LS--------QLTEVCESHGNLTELWINGNNITKLSPSI-THLKKMNDFDASYNNLQTIP 240

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
            ++G W  +T L L  NQIS L + I NL NL+VL L +N L++LP++I  L  L+ L+L
Sbjct: 241 KEIGQWTKITNLILSFNQISVLPKAIGNLRNLQVLKLESNNLEELPNTISKLTNLEELNL 300

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
           + N +  LP+ IG L++L  LIL  N+L  LP  IG   +L+ L+V  N L  +P+E+G 
Sbjct: 301 QNNFIIKLPSGIGHLRKLATLILSDNKLEQLPPEIGSCCSLTILNVHNNYLHRLPDEVGH 360

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSL---DNCPLSQIPSEIVVGGPSLIIRYL 573
           L+ L TL L  N  L  +P  ++  +NL+ + L      PL  + +E +  G  ++   L
Sbjct: 361 LQKLTTLGLIGNK-LEYLPITVSKLTNLKALWLTPNQTQPLIHLQNEQLPDGQVVLTSVL 419

Query: 574 KMQGP 578
             Q P
Sbjct: 420 FPQVP 424



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 163/347 (46%), Gaps = 49/347 (14%)

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
           P+++KL  L  L L  N L  +P  I  + NL  L L +  +  +P ++  L  LR+L+L
Sbjct: 103 PNIDKLNKLTILDLSMNDLGKVPEAIMSLINLQQLCLNDTGIDYVPANIGRLSNLRILEL 162

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
           R N L ELP  + +LT+L+ L +  N +  +    +   NL+ L +  N I +L P +  
Sbjct: 163 RDNSLRELPKSIRRLTNLQRLDVSDNNLSQLTEVCESHGNLTELWINGNNITKLSPSITH 222

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           LK +   D ++N+L+ +PKEIG  T +  L L  N++  +P  +GNL NL  L+L  N L
Sbjct: 223 LKKMNDFDASYNNLQTIPKEIGQWTKITNLILSFNQISVLPKAIGNLRNLQVLKLESNNL 282

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
           E +P T+SK  +L E N++   +  LP G +  L  +  + LS NK              
Sbjct: 283 EELPNTISKLTNLEELNLQNNFIIKLPSG-IGHLRKLATLILSDNK-------------- 327

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
                                             L  LP ++G+   LT LN+  N + +
Sbjct: 328 ----------------------------------LEQLPPEIGSCCSLTILNVHNNYLHR 353

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L +++ +L  L  L L  N L+ LP ++  L  LK L L  N+ + L
Sbjct: 354 LPDEVGHLQKLTTLGLIGNKLEYLPITVSKLTNLKALWLTPNQTQPL 400


>gi|418707285|ref|ZP_13268113.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|421128256|ref|ZP_15588473.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421133246|ref|ZP_15593395.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410022575|gb|EKO89351.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410434268|gb|EKP83407.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410772424|gb|EKR47610.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 374

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/335 (35%), Positives = 181/335 (54%), Gaps = 26/335 (7%)

Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
           LYL G KL +LP +IG + NL  L L EN L + P  +  L+ LRVL+L +N+L   P  
Sbjct: 48  LYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKTFPKE 107

Query: 189 VYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH 248
           + +L +L  LYL  N++ T+   I  L NL  L +  N++  LP E+G+LKNL  L+L +
Sbjct: 108 IGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNN 167

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
           N L  LP+EIG    L TL+L +N+L+ +   +G L NL  L L+YN+L  +P  + +  
Sbjct: 168 NQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLK 227

Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
           +L    +    L +L    +  L ++  + L  N+F   P                 N+I
Sbjct: 228 NLQALELNNNQLKTLSKE-IGQLKNLKRLDLGYNQFKIIP-----------------NEI 269

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
           +++        +NL  + + +N LT+L  ++G    L EL L  NQ + L E+I  L NL
Sbjct: 270 EQL--------QNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTLPEEIGQLKNL 321

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           +VL L+NN LK L   IG L+ LK L+L+ N+L S
Sbjct: 322 QVLELNNNQLKTLSKEIGQLKNLKRLELDNNQLSS 356



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 112/335 (33%), Positives = 178/335 (53%), Gaps = 26/335 (7%)

Query: 194 SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE 253
            ++ LYL   ++ T+  +I  L NL  L++ +N +   P E+G+L+NL  L+L +N L+ 
Sbjct: 44  DVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKT 103

Query: 254 LPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEF 313
            PKEIG    L+ L L +N+L+ +   +G L NL  L L+YN+L  +P  + +  +L   
Sbjct: 104 FPKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQAL 163

Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
            +    L +LP+ +                          Q  ++ ++N  +NQ+  +  
Sbjct: 164 ELNNNQLMTLPEEI-------------------------GQLKNLQTLNLWNNQLMTLSK 198

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
           GI  + KNL ++ +  N LT LP ++G    L  L L  NQ+  LS++I  L NL+ L L
Sbjct: 199 GI-GQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDL 257

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
             N  K +P+ I  L+ L+ L+L  N+L +L  EIG L+ LQ L L  NQ  +LP  IG 
Sbjct: 258 GYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTLPEEIGQ 317

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L NL  L +  N L+++ +EIG L+NL  L L++N
Sbjct: 318 LKNLQVLELNNNQLKTLSKEIGQLKNLKRLELDNN 352



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/339 (34%), Positives = 173/339 (51%), Gaps = 27/339 (7%)

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ++  L +   K+  LP E+G+LKNL  L+L  N L   PKEIG    L  L+L +N+L  
Sbjct: 44  DVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKT 103

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
            P  +G      +  L+     +   TLSK +                      L ++  
Sbjct: 104 FPKEIGQ----LKNLLALYLNNNQLMTLSKGI--------------------GQLKNLQE 139

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           + L+ N+ T  P+    Q  ++ ++   +NQ+  +P  I  + KNL  +N+ +N L +L 
Sbjct: 140 LYLNYNQLTILPNE-IGQLKNLQALELNNNQLMTLPEEI-GQLKNLQTLNLWNNQLMTLS 197

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +G    L EL L  NQ++ L  +I  L NL+ L L+NN LK L   IG L+ LK LDL
Sbjct: 198 KGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDL 257

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N+ + +PNEI  L+ LQ L L +NQL +L + IG L NL  L +  N   ++PEEIG 
Sbjct: 258 GYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTLPEEIGQ 317

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           L+NL  L LN+N  L  +  E+    NL+ + LDN  LS
Sbjct: 318 LKNLQVLELNNNQ-LKTLSKEIGQLKNLKRLELDNNQLS 355



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 131/231 (56%), Gaps = 1/231 (0%)

Query: 116 LPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVL 175
           L   + +L +L+ELYL  N+L  LP++IG + NL  L L  N L +LP+ +  L+ L+ L
Sbjct: 127 LSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLKNLQTL 186

Query: 176 DLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPEL 235
           +L +N+L  L   + +L +L+ LYL +N++  +  +I  L NL  L + +N+++ L  E+
Sbjct: 187 NLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEI 246

Query: 236 GELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
           G+LKNL  LDL +N  + +P EI     L  L+L +N+L  +   +G L NL  L LSYN
Sbjct: 247 GQLKNLKRLDLGYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYN 306

Query: 296 RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           +  ++PE + +  +L    +    L +L    +  L ++  + L  N+ ++
Sbjct: 307 QFTTLPEEIGQLKNLQVLELNNNQLKTLSKE-IGQLKNLKRLELDNNQLSS 356



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 127/245 (51%), Gaps = 4/245 (1%)

Query: 317 GCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIF 376
           G  L++LP  +   L +++++ L  N   A+P     Q  ++  +   +NQ+   P  I 
Sbjct: 52  GQKLTTLPKEI-GQLKNLHDLNLDENPLGAFPKE-IGQLENLRVLELNNNQLKTFPKEIG 109

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
                L+     + L+T L   +G    L EL L  NQ++ L  +I  L NL+ L L+NN
Sbjct: 110 QLKNLLALYLNNNQLMT-LSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNN 168

Query: 437 LLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
            L  LP  IG L+ L+ L+L  N+L +L   IG LK LQ L L  NQL  LP  IG L N
Sbjct: 169 QLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKN 228

Query: 497 LSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ 556
           L  L +  N L+++ +EIG L+NL  L L  N     IP E+    NLQ++ L+N  L+ 
Sbjct: 229 LQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQ-FKIIPNEIEQLQNLQVLELNNNQLTT 287

Query: 557 IPSEI 561
           +  EI
Sbjct: 288 LSKEI 292



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 167/360 (46%), Gaps = 60/360 (16%)

Query: 69  HPESNKPKPTTKKKEPIQADLNIEKEFLRCKE-----------ENILNLDLSKSSITHLP 117
             E  +PK      E IQ  L++   +L  ++           +N+ +L+L ++ +   P
Sbjct: 23  QTEKVEPKTYRDLTEAIQNPLDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFP 82

Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGY-----------------------VTNLTCLGL 154
             + +L +L  L L  N+L + P +IG                        + NL  L L
Sbjct: 83  KEIGQLENLRVLELNNNQLKTFPKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYL 142

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
             N LT LP+ +  L+ L+ L+L +N+L  LP  + +L +L+ L L  N++ T+   I  
Sbjct: 143 NYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQ 202

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL  L +  N++  LP E+G+LKNL  L+L +N L+ L KEIG    L  LDL +N+ 
Sbjct: 203 LKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQF 262

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             IP+ +  L NL  L L+ N+L ++ + + +  +L E                      
Sbjct: 263 KIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQE---------------------- 300

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
             + LS N+FT  P     Q  ++  +   +NQ+  +   I  + KNL ++ + +N L+S
Sbjct: 301 --LYLSYNQFTTLPE-EIGQLKNLQVLELNNNQLKTLSKEI-GQLKNLKRLELDNNQLSS 356



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 94/157 (59%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L+ + +T LP  + +L +L+ L L  N+L +L  +IG + NL  L L  N   
Sbjct: 204 KNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFK 263

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            +P+ +  LQ L+VL+L +N+L  L   + +L +L+ LYL +N+  T+  +I  L NL +
Sbjct: 264 IIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTLPEEIGQLKNLQV 323

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
           L + +N+++ L  E+G+LKNL  L+L +N L    KE
Sbjct: 324 LELNNNQLKTLSKEIGQLKNLKRLELDNNQLSSEEKE 360



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 85/144 (59%), Gaps = 1/144 (0%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L+E IQN +++  L L+   L  LP  IG L+ L  L+L+EN L + P EIG L+ L+ L
Sbjct: 35  LTEAIQNPLDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVL 94

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
            L +NQL + P+ IG L NL  L +  N L ++ + IG L+NL  LYLN N  L  +P E
Sbjct: 95  ELNNNQLKTFPKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQ-LTILPNE 153

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +    NLQ + L+N  L  +P EI
Sbjct: 154 IGQLKNLQALELNNNQLMTLPEEI 177


>gi|79330883|ref|NP_001032080.1| leucine-rich receptor-like protein kinase [Arabidopsis thaliana]
 gi|332009331|gb|AED96714.1| leucine-rich receptor-like protein kinase [Arabidopsis thaliana]
          Length = 1090

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 145/446 (32%), Positives = 217/446 (48%), Gaps = 39/446 (8%)

Query: 115 HLPPSVEKLTHLEELYLYGNK--LASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQ 171
            +P ++ +L +LE     GNK     LP +IG   +L  LGLAE SL+  LP S+ NL++
Sbjct: 183 EIPRTIGELKNLEIFRAGGNKNLRGELPWEIGNCESLVTLGLAETSLSGRLPASIGNLKK 242

Query: 172 LRVLDLRHNKLNE-LPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           ++ + L  + L+  +P  +   T L+ LYL  N I                         
Sbjct: 243 VQTIALYTSLLSGPIPDEIGNCTELQNLYLYQNSISG----------------------S 280

Query: 231 LPPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNELV-NIPDMLGNLINLT 288
           +P  +G LK L +L L  N+L  ++P E+G C  L  +DL  N L  NIP   GNL NL 
Sbjct: 281 IPVSMGRLKKLQSLLLWQNNLVGKIPTELGTCPELFLVDLSENLLTGNIPRSFGNLPNLQ 340

Query: 289 RLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            L+LS N+L  ++PE L+ C  L    ++   +S     L+  LTS+      +N+ T  
Sbjct: 341 ELQLSVNQLSGTIPEELANCTKLTHLEIDNNQISGEIPPLIGKLTSLTMFFAWQNQLTGI 400

Query: 348 PSGGPTQFTSVYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLLTS-LPLDLGTWVGL 405
                +Q   + +I+  +N +   IP GIF   +NL+K+ +  N L+  +P D+G    L
Sbjct: 401 IPESLSQCQELQAIDLSYNNLSGSIPNGIF-EIRNLTKLLLLSNYLSGFIPPDIGNCTNL 459

Query: 406 TELNLGTNQISK-LSEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLES 463
             L L  N+++  +  +I NL NL  + +S N L+  +P  I     L+ +DL  N L  
Sbjct: 460 YRLRLNGNRLAGNIPAEIGNLKNLNFIDISENRLIGNIPPEISGCTSLEFVDLHSNGLTG 519

Query: 464 -LPNEIGFLKELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENL 520
            LP  +   K LQ + L  N L  SLP  IG LT L+ L++ +N     IP EI +  +L
Sbjct: 520 GLPGTLP--KSLQFIDLSDNSLTGSLPTGIGSLTELTKLNLAKNRFSGEIPREISSCRSL 577

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQI 546
             L L DN     IP EL    +L I
Sbjct: 578 QLLNLGDNGFTGEIPNELGRIPSLAI 603



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 138/422 (32%), Positives = 219/422 (51%), Gaps = 22/422 (5%)

Query: 146 VTNLTCLGLAENSLT-SLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFN 203
           + +LT L L   +LT S+P  L +L +L VLDL  N L  E+P+ ++KL  LKIL L  N
Sbjct: 95  IKSLTLLSLTSVNLTGSIPKELGDLSELEVLDLADNSLSGEIPVDIFKLKKLKILSLNTN 154

Query: 204 RIKTVHP-DIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNH--LEELPKEIG 259
            ++ V P ++  L NL  L++ DNK+  E+P  +GELKNL       N     ELP EIG
Sbjct: 155 NLEGVIPSELGNLVNLIELTLFDNKLAGEIPRTIGELKNLEIFRAGGNKNLRGELPWEIG 214

Query: 260 NCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEG 317
           NC  LVTL L    L   +P  +GNL  +  + L  + L   +P+ +  C  L    +  
Sbjct: 215 NCESLVTLGLAETSLSGRLPASIGNLKKVQTIALYTSLLSGPIPDEIGNCTELQNLYLYQ 274

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS---VYSINFEHNQI-DKIPY 373
            ++S      +  L  + ++ L +N         PT+  +   ++ ++   N +   IP 
Sbjct: 275 NSISGSIPVSMGRLKKLQSLLLWQNNLVGKI---PTELGTCPELFLVDLSENLLTGNIPR 331

Query: 374 GIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVL 431
             F    NL ++ +  N L+ ++P +L     LT L +  NQIS ++   I  L +L + 
Sbjct: 332 S-FGNLPNLQELQLSVNQLSGTIPEELANCTKLTHLEIDNNQISGEIPPLIGKLTSLTMF 390

Query: 432 -VLSNNLLKKLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQLVS-LP 488
               N L   +P S+   ++L+ +DL  N L  S+PN I  ++ L +L+L SN L   +P
Sbjct: 391 FAWQNQLTGIIPESLSQCQELQAIDLSYNNLSGSIPNGIFEIRNLTKLLLLSNYLSGFIP 450

Query: 489 RAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIM 547
             IG+ TNL  L +  N L   IP EIG L+NL+ + +++N  + NIP E++ C++L+ +
Sbjct: 451 PDIGNCTNLYRLRLNGNRLAGNIPAEIGNLKNLNFIDISENRLIGNIPPEISGCTSLEFV 510

Query: 548 SL 549
            L
Sbjct: 511 DL 512



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 30/219 (13%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
           +PP +   T+L  L L GN+LA  +P++IG + NL  + ++EN L   +P  ++    L 
Sbjct: 449 IPPDIGNCTNLYRLRLNGNRLAGNIPAEIGNLKNLNFIDISENRLIGNIPPEISGCTSLE 508

Query: 174 VLDLRHNKL-----------------------NELPMVVYKLTSLKILYLRFNRIKTVHP 210
            +DL  N L                         LP  +  LT L  L L  NR     P
Sbjct: 509 FVDLHSNGLTGGLPGTLPKSLQFIDLSDNSLTGSLPTGIGSLTELTKLNLAKNRFSGEIP 568

Query: 211 -DIQYLSNLSMLSMRDNKIR-ELPPELGELKNL-VTLDLAHNHLE-ELPKEIGNCTMLVT 266
            +I    +L +L++ DN    E+P ELG + +L ++L+L+ NH   E+P    + T L T
Sbjct: 569 REISSCRSLQLLNLGDNGFTGEIPNELGRIPSLAISLNLSCNHFTGEIPSRFSSLTNLGT 628

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLES-VPETL 304
           LD+ HN+L    ++L +L NL  L +S+N     +P TL
Sbjct: 629 LDVSHNKLAGNLNVLADLQNLVSLNISFNEFSGELPNTL 667



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 101/206 (49%), Gaps = 11/206 (5%)

Query: 363 FEHNQIDKIPYGIFSRAKNLS--KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS-KLS 419
           F++    +IP  I    KNL   +     NL   LP ++G    L  L L    +S +L 
Sbjct: 176 FDNKLAGEIPRTI-GELKNLEIFRAGGNKNLRGELPWEIGNCESLVTLGLAETSLSGRLP 234

Query: 420 EDIQNLVNLEVLVLSNNLLKK-LPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRL 477
             I NL  ++ + L  +LL   +P  IGN  +L+ L L +N +  S+P  +G LK+LQ L
Sbjct: 235 ASIGNLKKVQTIALYTSLLSGPIPDEIGNCTELQNLYLYQNSISGSIPVSMGRLKKLQSL 294

Query: 478 ILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIP 535
           +L  N LV  +P  +G    L  + + EN L   IP   G L NL  L L+ N     IP
Sbjct: 295 LLWQNNLVGKIPTELGTCPELFLVDLSENLLTGNIPRSFGNLPNLQELQLSVNQLSGTIP 354

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEI 561
            ELA C+ L  + +DN   +QI  EI
Sbjct: 355 EELANCTKLTHLEIDN---NQISGEI 377



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 28/150 (18%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTS-- 161
           +DLS +S+T  LP  +  LT L +L L  N+ +  +P +I    +L  L L +N  T   
Sbjct: 532 IDLSDNSLTGSLPTGIGSLTELTKLNLAKNRFSGEIPREISSCRSLQLLNLGDNGFTGEI 591

Query: 162 ------------------------LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
                                   +P   ++L  L  LD+ HNKL     V+  L +L  
Sbjct: 592 PNELGRIPSLAISLNLSCNHFTGEIPSRFSSLTNLGTLDVSHNKLAGNLNVLADLQNLVS 651

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
           L + FN      P+  +   L +  +  NK
Sbjct: 652 LNISFNEFSGELPNTLFFRKLPLSVLESNK 681


>gi|432905687|ref|XP_004077467.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Oryzias
           latipes]
          Length = 724

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 191/389 (49%), Gaps = 29/389 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR 229
           + + V+D RH  L  +P  +++                      Y  +L  L +  N+IR
Sbjct: 12  RHVEVIDYRHRSLLYVPDEIFR----------------------YGRSLEELQLDANQIR 49

Query: 230 ELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTR 289
           +LP EL +L  L  L L+ N ++ LP EI N  +LV LD+  N++  IP+ + +   L  
Sbjct: 50  QLPKELFQLLKLRKLTLSDNEIQVLPPEIANLMLLVDLDVSRNDVYEIPESISHCKALQV 109

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS 349
              S N L  +P T      L   ++   +L  LPD    S +     +L+   +++   
Sbjct: 110 ADFSGNPLTRLPATFPDLQSLVCLSINDISLQRLPDDFGKSPSCCIPTSLASFIYSSL-- 167

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELN 409
              ++   +  ++   N+++++P  I     NL ++ +  N L  LP  L     L  L+
Sbjct: 168 ---SELHKLEGLDLGSNELEELPKSI-GNLSNLKELWLDGNQLVELPATLCRIRNLVCLD 223

Query: 410 LGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIG 469
           +  N++  L +++  L NL  L++S N ++ LP SIG L+KL  L +++N+L  LP  IG
Sbjct: 224 VSENKLEGLPQELGGLENLTDLLVSQNSIEALPESIGKLQKLSILKVDQNRLNCLPESIG 283

Query: 470 FLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNT 529
             + L  LIL  NQ+ SLPR+IG L  L  L+   N L S+P+EIG   +L+   + DN 
Sbjct: 284 SCESLAELILTENQIKSLPRSIGKLKKLFNLNCDRNQLTSLPKEIGGCCSLNVFCMRDNR 343

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIP 558
            L  IP EL+  + L ++ +    L+ +P
Sbjct: 344 -LTRIPAELSQATELHVLDVSGNRLAYLP 371



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 191/395 (48%), Gaps = 34/395 (8%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++  +D    S+ ++P  + +    LEEL L  N++  LP ++  +  L  L 
Sbjct: 7   LWRCNR-HVEVIDYRHRSLLYVPDEIFRYGRSLEELQLDANQIRQLPKELFQLLKLRKLT 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFN---RIKTVHP 210
           L++N +  LP  +ANL  L  LD+  N + E+P  +    +L++     N   R+    P
Sbjct: 66  LSDNEIQVLPPEIANLMLLVDLDVSRNDVYEIPESISHCKALQVADFSGNPLTRLPATFP 125

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELG--------------------ELKNLVTLDLAHNH 250
           D+Q   +L  LS+ D  ++ LP + G                    EL  L  LDL  N 
Sbjct: 126 DLQ---SLVCLSINDISLQRLPDDFGKSPSCCIPTSLASFIYSSLSELHKLEGLDLGSNE 182

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           LEELPK IGN + L  L L  N+LV +P  L  + NL  L +S N+LE +P+ L    +L
Sbjct: 183 LEELPKSIGNLSNLKELWLDGNQLVELPATLCRIRNLVCLDVSENKLEGLPQELGGLENL 242

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP-SGGPTQFTSVYSINFEHNQID 369
            +  V   ++ +LP+  +  L  ++ + + +N+    P S G  +  S+  +    NQI 
Sbjct: 243 TDLLVSQNSIEALPES-IGKLQKLSILKVDQNRLNCLPESIGSCE--SLAELILTENQIK 299

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
            +P  I  + K L  +N   N LTSLP ++G    L    +  N+++++  ++     L 
Sbjct: 300 SLPRSI-GKLKKLFNLNCDRNQLTSLPKEIGGCCSLNVFCMRDNRLTRIPAELSQATELH 358

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           VL +S N L  LP S+  L +LK L L EN+ + L
Sbjct: 359 VLDVSGNRLAYLPLSLTTL-QLKALWLSENQSQPL 392


>gi|198426048|ref|XP_002120095.1| PREDICTED: similar to leucine-rich repeats and IQ motif containing
           4 [Ciona intestinalis]
          Length = 599

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 205/414 (49%), Gaps = 21/414 (5%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +DL    +  +P  + +    EEL+L  N+L  +P ++G + NL  L +  N L  + D+
Sbjct: 138 IDLGNKQLDAIPEELYEFVETEELHLEHNQLQCMPPELGCLVNLRILYMDNNKLEDVNDN 197

Query: 166 LANLQQLRVLDLRHNKLNELPMV-VYKLTSLKILYL-RFNRIKTVHPDIQYLSNLSMLSM 223
           +A+LQ L  LDL  N    LP+  + +L +L  L L   N ++      + + +L +L +
Sbjct: 198 IASLQNLISLDLSFNPSLNLPISSIARLANLTDLRLYNINLMEFPTKFCRSMLHLELLGI 257

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
            +N +R LPPE+  LK L  L + +N L + P+ I +   L  LDL  N +  IP  +  
Sbjct: 258 SNNNLRNLPPEMERLKKLKELYVENNQLVDFPQCICSLANLKVLDLDGNRIYRIPQQVAG 317

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
           L++L +L L+ N L S+P+ L    +L   ++   ALS+LPD +   L    NI      
Sbjct: 318 LVSLNQLHLARNALTSLPDALCLLENLQLLDLGLNALSALPDSIQWLLHLPANI------ 371

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
                       TS+  +  + N++  +P   F   K+L+ + +  N     PL L +  
Sbjct: 372 ---------CALTSLQMLALDDNELQDLPEH-FGNLKSLAILGLTGNQFEEFPLSLCSVT 421

Query: 404 GLTELNLGTNQ---ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
            L +L LG +Q    +++ E +Q L  LE L L NNLL  LP  + +L+KL+  D+  N+
Sbjct: 422 SLQKLYLGQDQGKPFTRIPEQVQYLKELEELYLDNNLLITLPHVLRHLKKLRIFDISNNR 481

Query: 461 LESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           L +LP     +  L  + L +N L  LP  I    +L  LSV  N +Q  P+E+
Sbjct: 482 LSTLPATFTEITWLHSIKLDNNDLDKLPEEIDTFKSLKVLSVKNNPMQYPPKEV 535



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 223/467 (47%), Gaps = 27/467 (5%)

Query: 122 KLTHLEELYLYGNKLASLPSQIGYVTNLT-CLGLAENSLTSLPDSLANLQQLRVLDLRHN 180
           +L  L+++  +  K+ SLP+    + +    + L    L ++P+ L    +   L L HN
Sbjct: 107 RLQLLKDILEFPVKIESLPTAEKVLRHKKKYIDLGNKQLDAIPEELYEFVETEELHLEHN 166

Query: 181 KLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP-PELGELK 239
           +L  +P  +  L +L+ILY+  N+++ V+ +I  L NL  L +  N    LP   +  L 
Sbjct: 167 QLQCMPPELGCLVNLRILYMDNNKLEDVNDNIASLQNLISLDLSFNPSLNLPISSIARLA 226

Query: 240 NLVTLDLAHNHLEELPKEIGNCTMLVTLDL---QHNELVNIPDMLGNLINLTRLRLSYNR 296
           NL  L L + +L E P +   C  ++ L+L    +N L N+P  +  L  L  L +  N+
Sbjct: 227 NLTDLRLYNINLMEFPTKF--CRSMLHLELLGISNNNLRNLPPEMERLKKLKELYVENNQ 284

Query: 297 LESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFT 356
           L   P+ +    +L   +++G  +  +P  + + L S+N + L+RN  T+ P        
Sbjct: 285 LVDFPQCICSLANLKVLDLDGNRIYRIPQQV-AGLVSLNQLHLARNALTSLPDAL-CLLE 342

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS 416
           ++  ++   N +  +P  I                L  LP ++     L  L L  N++ 
Sbjct: 343 NLQLLDLGLNALSALPDSI--------------QWLLHLPANICALTSLQMLALDDNELQ 388

Query: 417 KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK---LESLPNEIGFLKE 473
            L E   NL +L +L L+ N  ++ P S+ ++  L+ L L +++      +P ++ +LKE
Sbjct: 389 DLPEHFGNLKSLAILGLTGNQFEEFPLSLCSVTSLQKLYLGQDQGKPFTRIPEQVQYLKE 448

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L+ L L +N L++LP  + HL  L    +  N L ++P     +  LH++ L DN  L+ 
Sbjct: 449 LEELYLDNNLLITLPHVLRHLKKLRIFDISNNRLSTLPATFTEITWLHSIKL-DNNDLDK 507

Query: 534 IPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYR 580
           +P E+    +L+++S+ N P+   P E+   G   I+ ++  +   R
Sbjct: 508 LPEEIDTFKSLKVLSVKNNPMQYPPKEVCENGLESILAFITHEKNVR 554



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 3/135 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYL---YGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           L L+ +     P S+  +T L++LYL    G     +P Q+ Y+  L  L L  N L +L
Sbjct: 403 LGLTGNQFEEFPLSLCSVTSLQKLYLGQDQGKPFTRIPEQVQYLKELEELYLDNNLLITL 462

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P  L +L++LR+ D+ +N+L+ LP    ++T L  + L  N +  +  +I    +L +LS
Sbjct: 463 PHVLRHLKKLRIFDISNNRLSTLPATFTEITWLHSIKLDNNDLDKLPEEIDTFKSLKVLS 522

Query: 223 MRDNKIRELPPELGE 237
           +++N ++  P E+ E
Sbjct: 523 VKNNPMQYPPKEVCE 537



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 83/155 (53%), Gaps = 2/155 (1%)

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR-KLKCLDLEENKLESLPN 466
           LN+   Q +KL E+ +  +  ++L     + + LP++   LR K K +DL   +L+++P 
Sbjct: 92  LNISNTQNTKLEENARLQLLKDILEFPVKI-ESLPTAEKVLRHKKKYIDLGNKQLDAIPE 150

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
           E+    E + L L+ NQL  +P  +G L NL  L +  N L+ + + I +L+NL +L L+
Sbjct: 151 ELYEFVETEELHLEHNQLQCMPPELGCLVNLRILYMDNNKLEDVNDNIASLQNLISLDLS 210

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            N  LN     +A  +NL  + L N  L + P++ 
Sbjct: 211 FNPSLNLPISSIARLANLTDLRLYNINLMEFPTKF 245


>gi|405971281|gb|EKC36127.1| Leucine-rich repeat-containing protein 40 [Crassostrea gigas]
          Length = 606

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 217/437 (49%), Gaps = 32/437 (7%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +LDLS + ++ LPP V  L H+ +  +  N+L+SLP +IG +  L CL +  N LT LP+
Sbjct: 176 DLDLSNNQLSELPPQVGHLYHVLKFNVSNNRLSSLPPEIGSMNALKCLDVTHNQLTHLPE 235

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSM 223
            L NL  L  L LRHN+L+ +P++     +LK ++L  N+I+ +  + +Q+L ++++L +
Sbjct: 236 DLGNLPNLEQLYLRHNQLSGIPLL-KNCKNLKEIHLGNNQIRKITAEHLQHLESVTVLDI 294

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD--ML 281
           RDNKI ELP E+  L  L  LDL +N L  LP  +G  T L ++ L  N + +I    ++
Sbjct: 295 RDNKISELPEEITCLSGLQRLDLTNNDLTGLPFVLGTITSLKSIVLDGNPMKSIRRDIIM 354

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS-SLTSINNITLS 340
              + L +   S  R+E  P+ +       +   +   +    +GL +  +    ++  S
Sbjct: 355 RGTVELKKYLCS--RIED-PQPVEPTNKGIQNGGDTGIVGGSGEGLKAHDIQQSKSLDYS 411

Query: 341 RNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD 398
             K TA P           V S+N   NQ   +P  +      L + N   N LT L  D
Sbjct: 412 NKKATAVPDDIWEVAMKAGVTSVNLSKNQFTDLPSNLILLESTLKEFNFGFNKLTKLNPD 471

Query: 399 LGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEE 458
           +  ++ LT L+L  N +S L  D+++L ++  +VLS N    LPSS+  ++KL+ +  + 
Sbjct: 472 ISLFLRLTTLDLRNNGLSDLPRDMESLQDMREIVLSCNRFTTLPSSLYEMKKLEIIFADN 531

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE 518
           NK+ ++ +  GF                      +L  L+ L +  NN+  +P E+G   
Sbjct: 532 NKITTI-DAAGF---------------------KNLPMLATLDLQNNNIDQVPPELGNCT 569

Query: 519 NLHTLYLNDNTCLNNIP 535
            + +L LN N   N  P
Sbjct: 570 QIKSLLLNGNAFRNPRP 586



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 143/534 (26%), Positives = 236/534 (44%), Gaps = 95/534 (17%)

Query: 124 THLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLN 183
           T L +L L  N L  +  +I     L+ L + +N L SLP S+  L+ L  LD+  NKL 
Sbjct: 80  TELTKLILASNLLTEISQEISNFQALSVLDIHDNRLESLPQSIRELENLVKLDVSRNKLK 139

Query: 184 ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVT 243
           ELP  V  L +L+ L++ +N +  V   I +L  L  L + +N++ ELPP++G L +++ 
Sbjct: 140 ELPESVTYLRNLRSLHVEYNELVRVSEGIGHLDKLEDLDLSNNQLSELPPQVGHLYHVLK 199

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
            ++++N L  LP EIG+   L  LD+ HN+L ++P+ LGNL NL +L L +N+L  +P  
Sbjct: 200 FNVSNNRLSSLPPEIGSMNALKCLDVTHNQLTHLPEDLGNLPNLEQLYLRHNQLSGIP-L 258

Query: 304 LSKCVHLNE------------------------FNVEGCALSSLPDGLLSSLTSINNITL 339
           L  C +L E                         ++    +S LP+ + + L+ +  + L
Sbjct: 259 LKNCKNLKEIHLGNNQIRKITAEHLQHLESVTVLDIRDNKISELPEEI-TCLSGLQRLDL 317

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR--------------------- 378
           + N  T  P    T  TS+ SI  + N +  I   I  R                     
Sbjct: 318 TNNDLTGLPFVLGT-ITSLKSIVLDGNPMKSIRRDIIMRGTVELKKYLCSRIEDPQPVEP 376

Query: 379 ----------------------------AKNLSKVNMKDNLLTSLPLDLGTW-----VGL 405
                                       +K+L   N K    T++P D+  W      G+
Sbjct: 377 TNKGIQNGGDTGIVGGSGEGLKAHDIQQSKSLDYSNKK---ATAVPDDI--WEVAMKAGV 431

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLV----LSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
           T +NL  NQ + L     NL+ LE  +       N L KL   I    +L  LDL  N L
Sbjct: 432 TSVNLSKNQFTDLP---SNLILLESTLKEFNFGFNKLTKLNPDISLFLRLTTLDLRNNGL 488

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE-IGTLENL 520
             LP ++  L++++ ++L  N+  +LP ++  +  L  +    N + +I       L  L
Sbjct: 489 SDLPRDMESLQDMREIVLSCNRFTTLPSSLYEMKKLEIIFADNNKITTIDAAGFKNLPML 548

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
            TL L +N  ++ +P EL  C+ ++ + L+          I+  G   ++ YL+
Sbjct: 549 ATLDLQNNN-IDQVPPELGNCTQIKSLLLNGNAFRNPRPAILTKGTLALLEYLR 601



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 45/177 (25%)

Query: 100 EENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSL 159
           E  +   +   + +T L P +     L  L L  N L+ LP  +  + ++  + L+ N  
Sbjct: 452 ESTLKEFNFGFNKLTKLNPDISLFLRLTTLDLRNNGLSDLPRDMESLQDMREIVLSCNRF 511

Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLS 219
           T+LP SL                       Y++  L+I++   N+I T+  D     NL 
Sbjct: 512 TTLPSSL-----------------------YEMKKLEIIFADNNKITTI--DAAGFKNLP 546

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           ML+                    TLDL +N+++++P E+GNCT + +L L  N   N
Sbjct: 547 MLA--------------------TLDLQNNNIDQVPPELGNCTQIKSLLLNGNAFRN 583


>gi|255575336|ref|XP_002528571.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223532015|gb|EEF33826.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 571

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 204/406 (50%), Gaps = 40/406 (9%)

Query: 190 YKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHN 249
           ++   L+ L L  N I+++  D++ L  L++L++ +NK+  LP  +GEL  L +LD++ N
Sbjct: 41  WETVELQKLILAHNSIESLKEDLRLLPQLTVLNVSNNKLTALPAAIGELSLLKSLDVSFN 100

Query: 250 HLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVH 309
            ++ +P EIG+ T LV  D   N+L  +P  +G  ++L+ L++S N + S PE L+KC+ 
Sbjct: 101 MIQTVPDEIGSATSLVKFDCSSNQLKELPGSVGRCLDLSELKVSNNLITSFPEDLAKCLK 160

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
           L + +VEG  L +  + L++S T +  +  S+N  T  P    +  + +  ++F  N+I 
Sbjct: 161 LTKVDVEGNKLQTFSENLMASWTMLTELNASKNLLTCIPDNVGS-LSRLIRLDFHQNKIS 219

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
            IP  I     +L +  M +NLL++LP ++G    L  L+L +NQ+ +   +   L +L 
Sbjct: 220 SIPPSI-KGCCSLLEFYMGNNLLSTLPAEIGEVSRLATLDLHSNQLKEFPVEGCKL-HLS 277

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL---------PNEIGFLKE------- 473
           VL LSNN L  LP  IG +  L+ L L  N L ++         P  + +L+        
Sbjct: 278 VLDLSNNSLSGLPLEIGRMTTLRKLLLTGNPLRTIRSSLVSGPTPALLRYLRSRLSEGED 337

Query: 474 --------------LQRLILQSNQLV-------SLPRAIGHLTNLSYLSVGENNLQSIPE 512
                           RL + + +L        ++P  +     +  + + +N++Q +P 
Sbjct: 338 SEANTPPRKDVIAMASRLSISTKELFLVGLGLSAVPSEVWESGEIVKVDLSKNSIQKLPV 397

Query: 513 EIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           E+ +  +L TL L+ N         L   SNL  + LDN PL QIP
Sbjct: 398 ELSSCVSLQTLILSKNKIQEWPGAILKSLSNLSCLKLDNNPLRQIP 443



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 215/464 (46%), Gaps = 42/464 (9%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +LD+S + I  +P  +   T L +     N+L  LP  +G   +L+ L ++ N +TS P+
Sbjct: 94  SLDVSFNMIQTVPDEIGSATSLVKFDCSSNQLKELPGSVGRCLDLSELKVSNNLITSFPE 153

Query: 165 SLANLQQLRVLDLRHNKLNELPM-VVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
            LA   +L  +D+  NKL      ++   T L  L    N +  +  ++  LS L  L  
Sbjct: 154 DLAKCLKLTKVDVEGNKLQTFSENLMASWTMLTELNASKNLLTCIPDNVGSLSRLIRLDF 213

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
             NKI  +PP +    +L+   + +N L  LP EIG  + L TLDL  N+L   P + G 
Sbjct: 214 HQNKISSIPPSIKGCCSLLEFYMGNNLLSTLPAEIGEVSRLATLDLHSNQLKEFP-VEGC 272

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT-SINNITLSR- 341
            ++L+ L LS N L  +P  + +   L +  + G  L ++   L+S  T ++     SR 
Sbjct: 273 KLHLSVLDLSNNSLSGLPLEIGRMTTLRKLLLTGNPLRTIRSSLVSGPTPALLRYLRSRL 332

Query: 342 -----NKFTAYPSGGPTQFTSVYSINFEHN-----QIDKIPYGIFSRAKNLSKVNMKDNL 391
                ++    P        S  SI+ +        +  +P  ++   + + KV++  N 
Sbjct: 333 SEGEDSEANTPPRKDVIAMASRLSISTKELFLVGLGLSAVPSEVWESGE-IVKVDLSKNS 391

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDI-QNLVNLEVLVLSNNLLKKLP-SSIGNLR 449
           +  LP++L + V L  L L  N+I +    I ++L NL  L L NN L+++P      + 
Sbjct: 392 IQKLPVELSSCVSLQTLILSKNKIQEWPGAILKSLSNLSCLKLDNNPLRQIPLDGFQAVS 451

Query: 450 KLKCLDLEEN------------------------KLESLPNEIGFLKELQRLILQSNQLV 485
            L+ LDL  N                        +L  +P++I  L +L+ L L  N L 
Sbjct: 452 MLQILDLSGNPASVCELPPFSKLPHLQELYLRHVQLHEVPSDILSLLQLRILDLSRNSLQ 511

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLE-NLHTLYLNDN 528
           S+P     LT+L+ L + +N++ ++P E+G LE +L  L L+ N
Sbjct: 512 SIPEGFKSLTSLTELDLSDNSIAALPPELGFLEPSLQALRLDGN 555



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 228/516 (44%), Gaps = 70/516 (13%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L+ +SI  L   +  L  L  L +  NKL +LP+ IG ++ L  L ++ N + ++PD 
Sbjct: 49  LILAHNSIESLKEDLRLLPQLTVLNVSNNKLTALPAAIGELSLLKSLDVSFNMIQTVPDE 108

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           + +   L   D   N+L ELP  V +   L  L +  N I +   D+     L+ + +  
Sbjct: 109 IGSATSLVKFDCSSNQLKELPGSVGRCLDLSELKVSNNLITSFPEDLAKCLKLTKVDVEG 168

Query: 226 NKIRE------------------------LPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
           NK++                         +P  +G L  L+ LD   N +  +P  I  C
Sbjct: 169 NKLQTFSENLMASWTMLTELNASKNLLTCIPDNVGSLSRLIRLDFHQNKISSIPPSIKGC 228

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L+   + +N L  +P  +G +  L  L L  N+L+  P    K +HL+  ++   +LS
Sbjct: 229 CSLLEFYMGNNLLSTLPAEIGEVSRLATLDLHSNQLKEFPVEGCK-LHLSVLDLSNNSLS 287

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPS---GGPT----QFTSVYSINFEHNQIDKIPY- 373
            LP   +  +T++  + L+ N      S    GPT    ++        E ++ +  P  
Sbjct: 288 GLPLE-IGRMTTLRKLLLTGNPLRTIRSSLVSGPTPALLRYLRSRLSEGEDSEANTPPRK 346

Query: 374 GIFSRAKNLSKVNMKDNLLTSLPLDL---GTWVG--LTELNLGTNQISKLSEDIQNLVNL 428
            + + A  LS ++ K+  L  L L       W    + +++L  N I KL  ++ + V+L
Sbjct: 347 DVIAMASRLS-ISTKELFLVGLGLSAVPSEVWESGEIVKVDLSKNSIQKLPVELSSCVSL 405

Query: 429 EVLVLSNNLLKKLPSSI-GNLRKLKCLDLEENKLESLPNEIGF----------------- 470
           + L+LS N +++ P +I  +L  L CL L+ N L  +P + GF                 
Sbjct: 406 QTLILSKNKIQEWPGAILKSLSNLSCLKLDNNPLRQIPLD-GFQAVSMLQILDLSGNPAS 464

Query: 471 ---------LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
                    L  LQ L L+  QL  +P  I  L  L  L +  N+LQSIPE   +L +L 
Sbjct: 465 VCELPPFSKLPHLQELYLRHVQLHEVPSDILSLLQLRILDLSRNSLQSIPEGFKSLTSLT 524

Query: 522 TLYLNDNTCLNNIPFELALCS-NLQIMSLDNCPLSQ 556
            L L+DN+ +  +P EL     +LQ + LD  PL +
Sbjct: 525 ELDLSDNS-IAALPPELGFLEPSLQALRLDGNPLRR 559



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 214/453 (47%), Gaps = 52/453 (11%)

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           LA NS+ SL + L  L QL VL++ +NKL  LP  + +L+ LK L + FN I+TV  +I 
Sbjct: 51  LAHNSIESLKEDLRLLPQLTVLNVSNNKLTALPAAIGELSLLKSLDVSFNMIQTVPDEIG 110

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC------------ 261
             ++L       N+++ELP  +G   +L  L +++N +   P+++  C            
Sbjct: 111 SATSLVKFDCSSNQLKELPGSVGRCLDLSELKVSNNLITSFPEDLAKCLKLTKVDVEGNK 170

Query: 262 ------------TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVH 309
                       TML  L+   N L  IPD +G+L  L RL    N++ S+P ++  C  
Sbjct: 171 LQTFSENLMASWTMLTELNASKNLLTCIPDNVGSLSRLIRLDFHQNKISSIPPSIKGCCS 230

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
           L EF +    LS+LP   +  ++ +  + L  N+   +P  G     SV  ++  +N + 
Sbjct: 231 LLEFYMGNNLLSTLP-AEIGEVSRLATLDLHSNQLKEFPVEGCKLHLSV--LDLSNNSLS 287

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL- 428
            +P  I  R   L K+ +  N L ++   L +  G T   L   + S+LSE   +  N  
Sbjct: 288 GLPLEI-GRMTTLRKLLLTGNPLRTIRSSLVS--GPTPALLRYLR-SRLSEGEDSEANTP 343

Query: 429 ---EVLVLSNNL-------------LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
              +V+ +++ L             L  +PS +    ++  +DL +N ++ LP E+    
Sbjct: 344 PRKDVIAMASRLSISTKELFLVGLGLSAVPSEVWESGEIVKVDLSKNSIQKLPVELSSCV 403

Query: 473 ELQRLILQSNQLVSLPRAI-GHLTNLSYLSVGENNLQSIP-EEIGTLENLHTLYLNDN-T 529
            LQ LIL  N++   P AI   L+NLS L +  N L+ IP +    +  L  L L+ N  
Sbjct: 404 SLQTLILSKNKIQEWPGAILKSLSNLSCLKLDNNPLRQIPLDGFQAVSMLQILDLSGNPA 463

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
            +  +P   +   +LQ + L +  L ++PS+I+
Sbjct: 464 SVCELP-PFSKLPHLQELYLRHVQLHEVPSDIL 495



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 194/445 (43%), Gaps = 63/445 (14%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYV--------------- 146
           +++  D S + +  LP SV +   L EL +  N + S P  +                  
Sbjct: 114 SLVKFDCSSNQLKELPGSVGRCLDLSELKVSNNLITSFPEDLAKCLKLTKVDVEGNKLQT 173

Query: 147 ---------TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
                    T LT L  ++N LT +PD++ +L +L  LD   NK++ +P  +    SL  
Sbjct: 174 FSENLMASWTMLTELNASKNLLTCIPDNVGSLSRLIRLDFHQNKISSIPPSIKGCCSLLE 233

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
            Y+  N + T+  +I  +S L+ L +  N+++E P E  +L +L  LDL++N L  LP E
Sbjct: 234 FYMGNNLLSTLPAEIGEVSRLATLDLHSNQLKEFPVEGCKL-HLSVLDLSNNSLSGLPLE 292

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGN-----LINLTRLRLSYN---------RLESVPET 303
           IG  T L  L L  N L  I   L +     L+   R RLS           R + +   
Sbjct: 293 IGRMTTLRKLLLTGNPLRTIRSSLVSGPTPALLRYLRSRLSEGEDSEANTPPRKDVIAMA 352

Query: 304 LSKCVHLNEFNVEGCALSSLPDGL----------------------LSSLTSINNITLSR 341
               +   E  + G  LS++P  +                      LSS  S+  + LS+
Sbjct: 353 SRLSISTKELFLVGLGLSAVPSEVWESGEIVKVDLSKNSIQKLPVELSSCVSLQTLILSK 412

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL-DLG 400
           NK   +P       +++  +  ++N + +IP   F     L  +++  N  +   L    
Sbjct: 413 NKIQEWPGAILKSLSNLSCLKLDNNPLRQIPLDGFQAVSMLQILDLSGNPASVCELPPFS 472

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
               L EL L   Q+ ++  DI +L+ L +L LS N L+ +P    +L  L  LDL +N 
Sbjct: 473 KLPHLQELYLRHVQLHEVPSDILSLLQLRILDLSRNSLQSIPEGFKSLTSLTELDLSDNS 532

Query: 461 LESLPNEIGFLK-ELQRLILQSNQL 484
           + +LP E+GFL+  LQ L L  N L
Sbjct: 533 IAALPPELGFLEPSLQALRLDGNPL 557



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 154/291 (52%), Gaps = 6/291 (2%)

Query: 285 INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKF 344
           + L +L L++N +ES+ E L     L   NV    L++LP  +   L+ + ++ +S N  
Sbjct: 44  VELQKLILAHNSIESLKEDLRLLPQLTVLNVSNNKLTALPAAI-GELSLLKSLDVSFNMI 102

Query: 345 TAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
              P    +  TS+   +   NQ+ ++P G   R  +LS++ + +NL+TS P DL   + 
Sbjct: 103 QTVPDEIGSA-TSLVKFDCSSNQLKELP-GSVGRCLDLSELKVSNNLITSFPEDLAKCLK 160

Query: 405 LTELNLGTNQISKLSEDI-QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           LT++++  N++   SE++  +   L  L  S NLL  +P ++G+L +L  LD  +NK+ S
Sbjct: 161 LTKVDVEGNKLQTFSENLMASWTMLTELNASKNLLTCIPDNVGSLSRLIRLDFHQNKISS 220

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           +P  I     L    + +N L +LP  IG ++ L+ L +  N L+  P E G   +L  L
Sbjct: 221 IPPSIKGCCSLLEFYMGNNLLSTLPAEIGEVSRLATLDLHSNQLKEFPVE-GCKLHLSVL 279

Query: 524 YLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
            L++N+ L+ +P E+   + L+ + L   PL  I S +V G    ++RYL+
Sbjct: 280 DLSNNS-LSGLPLEIGRMTTLRKLLLTGNPLRTIRSSLVSGPTPALLRYLR 329


>gi|198432797|ref|XP_002122413.1| PREDICTED: similar to leucine rich repeat containing 7 [Ciona
           intestinalis]
          Length = 2484

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 213/463 (46%), Gaps = 57/463 (12%)

Query: 89  LNIEKEFLR---CKEEN----ILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLP 140
           +N  K+F     C  E+    +  LD   +++  +P  +   +  L +L L  N +  LP
Sbjct: 451 MNRAKDFFGQCLCHSEDSADQVTELDYCSTNLKEVPAEIWSYSATLTKLLLESNTITELP 510

Query: 141 SQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL 200
            ++    NL  L +++N ++ LP SLA+L  L  LD+  N + ++P  +    +L +L  
Sbjct: 511 KELFTCQNLRYLSVSDNDISVLPASLASLVNLNHLDISKNVIEDVPECIRCCKNLHVLDA 570

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
             N ++ +      L +L  L M D     LP   G +  L  L+L  N L+ LPK +  
Sbjct: 571 SVNPVERLSEGFTQLMSLRELYMNDCFFDFLPANFGRMSQLRVLELRDNQLQILPKSMRR 630

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
            T+L  LDL  N     PD++  L NLT L L  N L  VP ++                
Sbjct: 631 LTLLSRLDLGGNVFQEWPDVICELTNLTELWLDCNELNRVPTSI---------------- 674

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
                G L+ LT ++   LSRN   + PS                 QI  +        +
Sbjct: 675 -----GDLTKLTYLD---LSRNFLESIPS-----------------QIGNL--------E 701

Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
            L  + + +N L  LP  +G    L  LNL  NQ++ L E +  L  LE L +++N L  
Sbjct: 702 CLKDLLLSENSLGYLPDTIGFLRQLNILNLEMNQLTTLPESMGKLTMLEELDITHNKLDI 761

Query: 441 LPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYL 500
           LP+SIGNLR LK L L++N +  +P E+G   +L  L L  N +  LP ++G L NL  L
Sbjct: 762 LPTSIGNLRSLKTLLLDDNNIYEVPAELGSCTQLNILQLSRNNIEQLPDSLGDLVNLCVL 821

Query: 501 SVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
           ++ +N L  +P  +  L  LH L+++ N    N+P    LC +
Sbjct: 822 NLCQNRLPYLPITMIKLTKLHALWVSSNQSKPNVPLHAELCPD 864



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 176/335 (52%), Gaps = 5/335 (1%)

Query: 228 IRELPPELGELK-NLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
           ++E+P E+      L  L L  N + ELPKE+  C  L  L +  N++  +P  L +L+N
Sbjct: 482 LKEVPAEIWSYSATLTKLLLESNTITELPKELFTCQNLRYLSVSDNDISVLPASLASLVN 541

Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           L  L +S N +E VPE +  C +L+  +     +  L +G  + L S+  + ++   F  
Sbjct: 542 LNHLDISKNVIEDVPECIRCCKNLHVLDASVNPVERLSEGF-TQLMSLRELYMNDCFFDF 600

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
            P+    + + +  +    NQ+  +P  +  R   LS++++  N+    P  +     LT
Sbjct: 601 LPANF-GRMSQLRVLELRDNQLQILPKSM-RRLTLLSRLDLGGNVFQEWPDVICELTNLT 658

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
           EL L  N+++++   I +L  L  L LS N L+ +PS IGNL  LK L L EN L  LP+
Sbjct: 659 ELWLDCNELNRVPTSIGDLTKLTYLDLSRNFLESIPSQIGNLECLKDLLLSENSLGYLPD 718

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            IGFL++L  L L+ NQL +LP ++G LT L  L +  N L  +P  IG L +L TL L+
Sbjct: 719 TIGFLRQLNILNLEMNQLTTLPESMGKLTMLEELDITHNKLDILPTSIGNLRSLKTLLLD 778

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           DN  +  +P EL  C+ L I+ L    + Q+P  +
Sbjct: 779 DNN-IYEVPAELGSCTQLNILQLSRNNIEQLPDSL 812


>gi|387016772|gb|AFJ50505.1| Leucine-rich repeat-containing protein 1-like [Crotalus adamanteus]
          Length = 524

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 191/383 (49%), Gaps = 28/383 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + + ++D RH  L  +P  +Y+ + SL+ L L  N+++ +      L  L  L + DN+I
Sbjct: 12  RHVEMIDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPFFQLIKLRKLGLSDNEI 71

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM-------- 280
           + LPPE+     LV LDL+ N + E+P+ I  C  L   D   N L  +P+         
Sbjct: 72  QRLPPEIANFMQLVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPESFPELQNLT 131

Query: 281 ---------------LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
                          +GNL NL  L L  N L  +PE+++    L E ++    L +LP 
Sbjct: 132 CLSANDISLQALPENIGNLYNLASLELRENLLTYLPESVAHLQRLEELDLGNNELYNLP- 190

Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
           G + +L ++ ++ L  N+    P    +   ++  ++   N+++K+P  I      L+ +
Sbjct: 191 GTIGALYNLKDLWLDGNQLAEIPQEIGS-LKNLLCLDISENKLEKLPEEINGLTA-LTDL 248

Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
            +  NLL  LP  +G    L+ L +  N++++L+E + N   L  LVL+ N L  LP SI
Sbjct: 249 LISQNLLEMLPDGVGKLKKLSILKVDQNRLTQLTEAVGNCECLTELVLTENQLLTLPKSI 308

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
           G L+KL  L+++ NKL SLP EIG    L    ++ NQL  +P  I H T L  L V  N
Sbjct: 309 GKLKKLNILNVDRNKLVSLPKEIGGCCSLNVFSVRDNQLSRIPPEISHATELHVLDVAGN 368

Query: 506 NLQSIPEEIGTLENLHTLYLNDN 528
            L  +P  + +L+ L  L+L+DN
Sbjct: 369 RLIHLPMSLTSLK-LKALWLSDN 390



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 193/417 (46%), Gaps = 29/417 (6%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++  +D    S+  +P  + + +  LEEL L  N+L  LP     +  L  LG
Sbjct: 7   LWRCNR-HVEMIDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPFFQLIKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LDL  N + E+P  +    SL++     N +  +     
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPESFP 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L NL+ LS  D  ++ LP  +G L NL +L+L  N L  LP+ + +   L  LDL +NE
Sbjct: 126 ELQNLTCLSANDISLQALPENIGNLYNLASLELRENLLTYLPESVAHLQRLEELDLGNNE 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L N+P  +G L NL  L L  N+L  +P+ +    +L   ++    L  LP+  ++ LT+
Sbjct: 186 LYNLPGTIGALYNLKDLWLDGNQLAEIPQEIGSLKNLLCLDISENKLEKLPEE-INGLTA 244

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ +S+N     P G                           + K LS + +  N LT
Sbjct: 245 LTDLLISQNLLEMLPDG-------------------------VGKLKKLSILKVDQNRLT 279

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
            L   +G    LTEL L  NQ+  L + I  L  L +L +  N L  LP  IG    L  
Sbjct: 280 QLTEAVGNCECLTELVLTENQLLTLPKSIGKLKKLNILNVDRNKLVSLPKEIGGCCSLNV 339

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
             + +N+L  +P EI    EL  L +  N+L+ LP ++  L  L  L + +N  Q +
Sbjct: 340 FSVRDNQLSRIPPEISHATELHVLDVAGNRLIHLPMSLTSL-KLKALWLSDNQSQPL 395



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 167/351 (47%), Gaps = 32/351 (9%)

Query: 217 NLSMLSMRDNKIRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
           ++ M+  R   +  +P E+    ++L  L L  N L ELPK       L  L L  NE+ 
Sbjct: 13  HVEMIDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPFFQLIKLRKLGLSDNEIQ 72

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            +P  + N + L  L LS N +  +PE++S C  L   +  G  L+ LP+    S   + 
Sbjct: 73  RLPPEIANFMQLVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPE----SFPELQ 128

Query: 336 NIT-LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
           N+T LS N  +      P    ++Y                     NL+ + +++NLLT 
Sbjct: 129 NLTCLSANDISL--QALPENIGNLY---------------------NLASLELRENLLTY 165

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +     L EL+LG N++  L   I  L NL+ L L  N L ++P  IG+L+ L CL
Sbjct: 166 LPESVAHLQRLEELDLGNNELYNLPGTIGALYNLKDLWLDGNQLAEIPQEIGSLKNLLCL 225

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           D+ ENKLE LP EI  L  L  L++  N L  LP  +G L  LS L V +N L  + E +
Sbjct: 226 DISENKLEKLPEEINGLTALTDLLISQNLLEMLPDGVGKLKKLSILKVDQNRLTQLTEAV 285

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGG 565
           G  E L  L L +N  L  +P  +     L I+++D   L  +P EI  GG
Sbjct: 286 GNCECLTELVLTENQLL-TLPKSIGKLKKLNILNVDRNKLVSLPKEI--GG 333


>gi|301773446|ref|XP_002922120.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog
           [Ailuropoda melanoleuca]
          Length = 1629

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 189/388 (48%), Gaps = 31/388 (7%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           +D RH        +     SL+ L L  N+++ +      L NL  L + DN+I+ LPPE
Sbjct: 17  VDKRHCXXXXXXXIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPE 76

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM-------------- 280
           +     LV LD++ N + E+P+ I  C  L   D   N L  +P+               
Sbjct: 77  VANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALND 136

Query: 281 ---------LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
                    +GNL NL  L L  N L+S+P +LS  V L + ++ G  L  LPD  L +L
Sbjct: 137 VSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVLPD-TLGAL 195

Query: 332 TSINNITLSRNKFTAYPSGGP--TQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
            ++  + L RN+ +A P   P       +  ++   N+++++P         L+ + +  
Sbjct: 196 PNLRELWLDRNQLSALP---PELGNLRRLVCLDVSENRLEELPA-ELGGLLLLTDLLLSQ 251

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
           NLL  LP  +G    L+ L +  N++ +++E I +  NL  LVL+ NLL  LP S+G L 
Sbjct: 252 NLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELVLTENLLTALPRSLGKLT 311

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
           KL  L+++ N+LE LP EIG    L  L L+ N+L +LP  + H   L  L V  N L+S
Sbjct: 312 KLTNLNVDRNRLEVLPPEIGGCVALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRS 371

Query: 510 IPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +P  +  L NL  L+L +N     + F+
Sbjct: 372 LPFALTHL-NLKALWLAENQAQPMLRFQ 398



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 123/358 (34%), Positives = 182/358 (50%), Gaps = 4/358 (1%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           LEEL L  N+L  LP     + NL  LGL++N +  LP  +AN  QL  LD+  N + E+
Sbjct: 37  LEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEI 96

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  +    +L+I     N +  +      L +L+ L++ D  ++ LP ++G L NLVTL+
Sbjct: 97  PESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLE 156

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           L  N L+ LP  +     L  LDL  NEL  +PD LG L NL  L L  N+L ++P  L 
Sbjct: 157 LRENLLKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALPNLRELWLDRNQLSALPPELG 216

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
               L   +V    L  LP   L  L  + ++ LS+N     P  G  Q   +  +  + 
Sbjct: 217 NLRRLVCLDVSENRLEELP-AELGGLLLLTDLLLSQNLLQRLPD-GIGQLKQLSILKVDQ 274

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           N++ ++   I    +NLS++ + +NLLT+LP  LG    LT LN+  N++  L  +I   
Sbjct: 275 NRLCEVTEAIGD-CENLSELVLTENLLTALPRSLGKLTKLTNLNVDRNRLEVLPPEIGGC 333

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           V L VL L +N L  LP  + +  +L  LD+  N+L SLP  +  L  L+ L L  NQ
Sbjct: 334 VALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRSLPFALTHLN-LKALWLAENQ 390



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/323 (34%), Positives = 155/323 (47%), Gaps = 27/323 (8%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L ELPK       L  L L  NE+  +P  + N + L  L +S N + 
Sbjct: 35  RSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIP 94

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
            +PE++  C  L   +  G  LS LP+G  + L S+ ++ L+     A P          
Sbjct: 95  EIPESIKFCKALEIADFSGNPLSRLPEGF-TQLRSLAHLALNDVSLQALP---------- 143

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
                          G      NL  + +++NLL SLP  L   V L +L+LG N++  L
Sbjct: 144 ---------------GDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVL 188

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
            + +  L NL  L L  N L  LP  +GNLR+L CLD+ EN+LE LP E+G L  L  L+
Sbjct: 189 PDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLLLLTDLL 248

Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFEL 538
           L  N L  LP  IG L  LS L V +N L  + E IG  ENL  L L +N  L  +P  L
Sbjct: 249 LSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELVLTEN-LLTALPRSL 307

Query: 539 ALCSNLQIMSLDNCPLSQIPSEI 561
              + L  +++D   L  +P EI
Sbjct: 308 GKLTKLTNLNVDRNRLEVLPPEI 330



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 174/363 (47%), Gaps = 50/363 (13%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
            ++ LD+S++ I  +P S++    LE     GN L+ LP     + +L  L L + SL +
Sbjct: 82  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQA 141

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + NL  L  L+LR N L  LP  +  L  L+ L L  N ++ +   +  L NL  L
Sbjct: 142 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALPNLREL 201

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  LPPELG L+ LV LD++ N LEELP E+G   +L  L L  N L  +PD +
Sbjct: 202 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLLLLTDLLLSQNLLQRLPDGI 261

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  L+ L++  NRL  V E +  C +L+E  +    L++LP   L  LT + N+ + R
Sbjct: 262 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELVLTENLLTALPRS-LGKLTKLTNLNVDR 320

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+                                                L  LP ++G 
Sbjct: 321 NR------------------------------------------------LEVLPPEIGG 332

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
            V L+ L+L  N+++ L  ++ +   L VL ++ N L+ LP ++ +L  LK L L EN+ 
Sbjct: 333 CVALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRSLPFALTHL-NLKALWLAENQA 391

Query: 462 ESL 464
           + +
Sbjct: 392 QPM 394



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 1/187 (0%)

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           I+  +++L ++ +  N L  LP      + L +L L  N+I +L  ++ N + L  L +S
Sbjct: 30  IYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVS 89

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
            N + ++P SI   + L+  D   N L  LP     L+ L  L L    L +LP  +G+L
Sbjct: 90  RNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQALPGDVGNL 149

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
            NL  L + EN L+S+P  +  L  L  L L  N  L  +P  L    NL+ + LD   L
Sbjct: 150 ANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNE-LEVLPDTLGALPNLRELWLDRNQL 208

Query: 555 SQIPSEI 561
           S +P E+
Sbjct: 209 SALPPEL 215



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 64/108 (59%), Gaps = 1/108 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN+  L L+++ +T LP S+ KLT L  L +  N+L  LP +IG    L+ L L +N L 
Sbjct: 288 ENLSELVLTENLLTALPRSLGKLTKLTNLNVDRNRLEVLPPEIGGCVALSVLSLRDNRLA 347

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           +LP  LA+  +L VLD+  N+L  LP  +  L +LK L+L  N+ + +
Sbjct: 348 TLPPELAHTAELHVLDVAGNRLRSLPFALTHL-NLKALWLAENQAQPM 394



 Score = 43.5 bits (101), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 3/90 (3%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
            + NL++ ++ +  LPP +     L  L L  N+LA+LP ++ +   L  L +A N L S
Sbjct: 312 KLTNLNVDRNRLEVLPPEIGGCVALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRS 371

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYK 191
           LP +L +L  L+ L L  N+    PM+ ++
Sbjct: 372 LPFALTHL-NLKALWLAENQAQ--PMLRFQ 398


>gi|395860102|ref|XP_003802354.1| PREDICTED: protein scribble homolog isoform 3 [Otolemur garnettii]
          Length = 1669

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 128/390 (32%), Positives = 196/390 (50%), Gaps = 6/390 (1%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++ ++D    S+  +P  + + +  LEEL L  N+L  LP     + NL  LG
Sbjct: 7   LWRCNR-HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N + E+P  +    +L+I     N +  +     
Sbjct: 66  LSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFT 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L +L+ L++ D  ++ LP ++G L NLVTL+L  N L+ LP  +     L  LDL  N+
Sbjct: 126 QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L  +PD LG L NL  L L  N+L ++P  L     L   +V    L  LP   L  L  
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELP-AELGGLVL 244

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ LS+N     P G   Q   +  +  + N++ ++P  I    +NLS++ + +NLLT
Sbjct: 245 LTDLLLSQNLLQRLPDGI-GQLKQLSILKVDQNRLCEVPEAIGD-CENLSELILTENLLT 302

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP  LG    LT LN+  N +  L  +I   V L VL L +N L  LP  + +  +L  
Sbjct: 303 ALPHSLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHV 362

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           LD+  N+L SLP  +  L  L+ L L  NQ
Sbjct: 363 LDVAGNRLRSLPFALTHLN-LKALWLAENQ 391



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 173/387 (44%), Gaps = 72/387 (18%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           +D RH  L  +P  +Y+                      Y  +L  L +  N++RELP  
Sbjct: 17  VDKRHCSLQAVPEEIYR----------------------YSRSLEELLLDANQLRELPKP 54

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
              L NL  L L+ N ++ LP E+ N   LV LD+  N   +IP+               
Sbjct: 55  FFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRN---DIPE--------------- 96

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
                +PE++  C  L   +  G  LS LPDG  + L S+ ++ L+     A P      
Sbjct: 97  -----IPESIKFCKALEIADFSGNPLSRLPDGF-TQLRSLAHLALNDVSLQALP------ 144

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
                              G      NL  + +++NLL SLP  L   V L +L+LG N 
Sbjct: 145 -------------------GDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +  L + +  L NL  L L  N L  LP  +GNLR+L CLD+ EN+LE LP E+G L  L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
             L+L  N L  LP  IG L  LS L V +N L  +PE IG  ENL  L L +N  L  +
Sbjct: 246 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVPEAIGDCENLSELILTEN-LLTAL 304

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEI 561
           P  L   + L  +++D   L  +P EI
Sbjct: 305 PHSLGKLTKLTNLNVDRNHLEVLPPEI 331



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 174/363 (47%), Gaps = 50/363 (13%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
            ++ LD+S++ I  +P S++    LE     GN L+ LP     + +L  L L + SL +
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + NL  L  L+LR N L  LP  +  L  L+ L L  N ++ +   +  L NL  L
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  LPPELG L+ LV LD++ N LEELP E+G   +L  L L  N L  +PD +
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGI 262

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  L+ L++  NRL  VPE +  C +L+E  +    L++LP   L  LT + N+ + R
Sbjct: 263 GQLKQLSILKVDQNRLCEVPEAIGDCENLSELILTENLLTALPHS-LGKLTKLTNLNVDR 321

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N                                                 L  LP ++G 
Sbjct: 322 NH------------------------------------------------LEVLPPEIGG 333

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
            V L+ L+L  N+++ L  ++ +   L VL ++ N L+ LP ++ +L  LK L L EN+ 
Sbjct: 334 CVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHL-NLKALWLAENQA 392

Query: 462 ESL 464
           + +
Sbjct: 393 QPM 395


>gi|296227601|ref|XP_002759487.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Callithrix jacchus]
          Length = 560

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 218/460 (47%), Gaps = 54/460 (11%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL--- 162
           +D S  S+T +P  +   T +EE++L  N++  +P +I  +  +  L L +N+L SL   
Sbjct: 30  IDASNQSLTAIPLEIFTFTEVEEVHLENNQIEEIPQEIQCLKKIRVLYLDKNNLRSLCPA 89

Query: 163 --------------------------------------------PDSLA-NLQQLRVLDL 177
                                                       P ++  NL  L +L L
Sbjct: 90  LGLLSSLESLDLSYNPIFSSSLLVVSFLRALRELRLYQTDLKEIPVTICKNLHHLELLGL 149

Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
             N L  LP  +   T L+ +YL+ N+++    ++  L NL ++ + +NKI  +P E+G 
Sbjct: 150 TGNHLKCLPKEIVNQTKLREIYLKRNQLEVFPQELCVLYNLEIIDLDENKIGAIPEEIGH 209

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L  L    LA N+L  LP  +  C+ L  LDL HN L +IP+ L  L  +T + LS NRL
Sbjct: 210 LTQLQKFFLASNNLPVLPVSLCQCSQLSVLDLSHNLLHSIPNSLAELREMTEIGLSGNRL 269

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
           E VP  + +   L+   +    L  L  G    L ++  + LS+N     P        +
Sbjct: 270 EKVPHLICRWTSLHLLYLRNTGLRRL-RGSFRRLVNLRCLDLSQNHLDHCPPQICV-LKN 327

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +  +  + N+I ++P  + S +K L  + +  N   S P ++ +   L +L +G +Q SK
Sbjct: 328 LEVLALDDNKIGQLPSELNSLSK-LKILGLTGNEFLSFPEEVLSLESLEKLYIGQDQGSK 386

Query: 418 LS---EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           L+   E I  L +L+ L + NN L+ LP S+G++  L+ LD   N L+ LP+ I   + L
Sbjct: 387 LTYVPEHIGKLQSLKELYIENNRLEYLPMSLGSIPNLEVLDCRHNSLKQLPDAICQAQAL 446

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           + L+L+ N L  LP  +  L N+  L++ +N ++  P+E+
Sbjct: 447 KELLLEDNLLTHLPENLDSLVNIKVLTLMDNPMKEPPKEV 486



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 174/351 (49%), Gaps = 52/351 (14%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   N+  +DL ++ I  +P  +  LT L++ +L  N L  LP  +   + L+ L L+ N
Sbjct: 185 CVLYNLEIIDLDENKIGAIPEEIGHLTQLQKFFLASNNLPVLPVSLCQCSQLSVLDLSHN 244

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L S+P+SLA L+++  + L  N+L ++P ++ + TSL +LYLR   ++ +    + L N
Sbjct: 245 LLHSIPNSLAELREMTEIGLSGNRLEKVPHLICRWTSLHLLYLRNTGLRRLRGSFRRLVN 304

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N +   PP++  LKNL  L L  N + +LP E+ + + L  L L  NE ++ 
Sbjct: 305 LRCLDLSQNHLDHCPPQICVLKNLEVLALDDNKIGQLPSELNSLSKLKILGLTGNEFLSF 364

Query: 278 PDMLGNLINLTRLRLSYN---RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
           P+ + +L +L +L +  +   +L  VPE + K   L E  +E   L  LP     SL SI
Sbjct: 365 PEEVLSLESLEKLYIGQDQGSKLTYVPEHIGKLQSLKELYIENNRLEYLP----MSLGSI 420

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            N+ +                     ++  HN + ++P  I  +A+ L ++ ++DNLLT 
Sbjct: 421 PNLEV---------------------LDCRHNSLKQLPDAI-CQAQALKELLLEDNLLTH 458

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
           LP                       E++ +LVN++VL L +N +K+ P  +
Sbjct: 459 LP-----------------------ENLDSLVNIKVLTLMDNPMKEPPKEV 486



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 184/377 (48%), Gaps = 9/377 (2%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEK-LTHLEELYLYGNKLASLPSQIGYVTNLTCLG 153
           FLR   E    L L ++ +  +P ++ K L HLE L L GN L  LP +I   T L  + 
Sbjct: 116 FLRALRE----LRLYQTDLKEIPVTICKNLHHLELLGLTGNHLKCLPKEIVNQTKLREIY 171

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L  N L   P  L  L  L ++DL  NK+  +P  +  LT L+  +L  N +  +   + 
Sbjct: 172 LKRNQLEVFPQELCVLYNLEIIDLDENKIGAIPEEIGHLTQLQKFFLASNNLPVLPVSLC 231

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
             S LS+L +  N +  +P  L EL+ +  + L+ N LE++P  I   T L  L L++  
Sbjct: 232 QCSQLSVLDLSHNLLHSIPNSLAELREMTEIGLSGNRLEKVPHLICRWTSLHLLYLRNTG 291

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L  +      L+NL  L LS N L+  P  +    +L    ++   +  LP   L+SL+ 
Sbjct: 292 LRRLRGSFRRLVNLRCLDLSQNHLDHCPPQICVLKNLEVLALDDNKIGQLPSE-LNSLSK 350

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY--GIFSRAKNLSKVNMKDNL 391
           +  + L+ N+F ++P        S+  +    +Q  K+ Y      + ++L ++ +++N 
Sbjct: 351 LKILGLTGNEFLSFPEEV-LSLESLEKLYIGQDQGSKLTYVPEHIGKLQSLKELYIENNR 409

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           L  LP+ LG+   L  L+   N + +L + I     L+ L+L +NLL  LP ++ +L  +
Sbjct: 410 LEYLPMSLGSIPNLEVLDCRHNSLKQLPDAICQAQALKELLLEDNLLTHLPENLDSLVNI 469

Query: 452 KCLDLEENKLESLPNEI 468
           K L L +N ++  P E+
Sbjct: 470 KVLTLMDNPMKEPPKEV 486



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 193/397 (48%), Gaps = 25/397 (6%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           +D  +  L  +P+ ++  T ++ ++L  N+I+ +  +IQ L  + +L +  N +R L P 
Sbjct: 30  IDASNQSLTAIPLEIFTFTEVEEVHLENNQIEEIPQEIQCLKKIRVLYLDKNNLRSLCPA 89

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVT--------LDLQHNELVNIP-DMLGNLI 285
           LG L +L +LDL++N        I + ++LV         L L   +L  IP  +  NL 
Sbjct: 90  LGLLSSLESLDLSYN-------PIFSSSLLVVSFLRALRELRLYQTDLKEIPVTICKNLH 142

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +L  L L+ N L+ +P+ +     L E  ++   L   P  L   L ++  I L  NK  
Sbjct: 143 HLELLGLTGNHLKCLPKEIVNQTKLREIYLKRNQLEVFPQEL-CVLYNLEIIDLDENKIG 201

Query: 346 AYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
           A P   G  TQ    +      N +  +P  +  +   LS +++  NLL S+P  L    
Sbjct: 202 AIPEEIGHLTQLQKFF---LASNNLPVLPVSL-CQCSQLSVLDLSHNLLHSIPNSLAELR 257

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            +TE+ L  N++ K+   I    +L +L L N  L++L  S   L  L+CLDL +N L+ 
Sbjct: 258 EMTEIGLSGNRLEKVPHLICRWTSLHLLYLRNTGLRRLRGSFRRLVNLRCLDLSQNHLDH 317

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
            P +I  LK L+ L L  N++  LP  +  L+ L  L +  N   S PEE+ +LE+L  L
Sbjct: 318 CPPQICVLKNLEVLALDDNKIGQLPSELNSLSKLKILGLTGNEFLSFPEEVLSLESLEKL 377

Query: 524 YL--NDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           Y+  +  + L  +P  +    +L+ + ++N  L  +P
Sbjct: 378 YIGQDQGSKLTYVPEHIGKLQSLKELYIENNRLEYLP 414


>gi|429962677|gb|ELA42221.1| hypothetical protein VICG_00620, partial [Vittaforma corneae ATCC
           50505]
          Length = 633

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/313 (34%), Positives = 167/313 (53%), Gaps = 3/313 (0%)

Query: 205 IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTML 264
           I+ +  D+  L  L  L +  N +  LPPE+GELKNL  L L  N L  LP E+     L
Sbjct: 56  IRFIGSDVGRLVKLEKLDLSFNNLETLPPEIGELKNLQHLGLYGNRLRTLPSEVEELKNL 115

Query: 265 VTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
             LDL++NE  + P ++  L NL RL L+ N+    P  +++   L    +    L  LP
Sbjct: 116 QHLDLRYNEFESFPTVIRKLKNLERLILNGNKFGLFPIEIAELKKLQRLELHDNKLKLLP 175

Query: 325 DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
           D +   +  +  + L  N+F ++P+    +  ++  +    N+++ +P  I  + K+L K
Sbjct: 176 DEI-GGMKELQTLYLGYNEFESFPTV-IVKLKNLQHLFLGGNKLETLPVEIV-KLKSLQK 232

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
           +N+  N     P  +G    L  LNL  N++  L + I  L NL+ L L  N  +  P+ 
Sbjct: 233 LNLLKNRFEIFPNVVGELENLKILNLSNNKLETLPDTIGELENLQELYLLKNRFEIFPNV 292

Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGE 504
           +G L  LK L+L  NKL+ LP+EIG L+ LQ L+L +N+L +LP AIG L NL  L++G 
Sbjct: 293 VGELENLKILNLSNNKLKILPSEIGKLENLQHLLLINNKLETLPAAIGELQNLRELNLGG 352

Query: 505 NNLQSIPEEIGTL 517
           N L+++P EI  L
Sbjct: 353 NKLETLPIEIEKL 365



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/360 (32%), Positives = 183/360 (50%), Gaps = 10/360 (2%)

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
           +Y  +++ +S+    IR +  ++G L  L  LDL+ N+LE LP EIG    L  L L  N
Sbjct: 41  EYPVDVTEISICRQGIRFIGSDVGRLVKLEKLDLSFNNLETLPPEIGELKNLQHLGLYGN 100

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLT 332
            L  +P  +  L NL  L L YN  ES P  + K  +L    + G      P   ++ L 
Sbjct: 101 RLRTLPSEVEELKNLQHLDLRYNEFESFPTVIRKLKNLERLILNGNKFGLFPIE-IAELK 159

Query: 333 SINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
            +  + L  NK    P   GG  +  ++Y     +N+ +  P  +  + KNL  + +  N
Sbjct: 160 KLQRLELHDNKLKLLPDEIGGMKELQTLY---LGYNEFESFPT-VIVKLKNLQHLFLGGN 215

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
            L +LP+++     L +LNL  N+       +  L NL++L LSNN L+ LP +IG L  
Sbjct: 216 KLETLPVEIVKLKSLQKLNLLKNRFEIFPNVVGELENLKILNLSNNKLETLPDTIGELEN 275

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L+ L L +N+ E  PN +G L+ L+ L L +N+L  LP  IG L NL +L +  N L+++
Sbjct: 276 LQELYLLKNRFEIFPNVVGELENLKILNLSNNKLKILPSEIGKLENLQHLLLINNKLETL 335

Query: 511 PEEIGTLENLHTLYLNDNTCLNNIPFEL-ALCSNLQIMSLDNCPLSQI-PSEIVVGGPSL 568
           P  IG L+NL  L L  N  L  +P E+  L  +L++++L    +S++   E  VG   L
Sbjct: 336 PAAIGELQNLRELNLGGNK-LETLPIEIEKLAGSLRLLNLRGNNISEVGDGERTVGWREL 394



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 183/378 (48%), Gaps = 31/378 (8%)

Query: 140 PSQI----GYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           PS+I     Y  ++T + +    +  +   +  L +L  LDL  N L  LP  + +L +L
Sbjct: 33  PSEIYSFDEYPVDVTEISICRQGIRFIGSDVGRLVKLEKLDLSFNNLETLPPEIGELKNL 92

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           + L L  NR++T+  +++ L NL  L +R N+    P  + +LKNL  L L  N     P
Sbjct: 93  QHLGLYGNRLRTLPSEVEELKNLQHLDLRYNEFESFPTVIRKLKNLERLILNGNKFGLFP 152

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
            EI     L  L+L  N+L  +PD +G +  L  L L YN  ES P  + K  +L    +
Sbjct: 153 IEIAELKKLQRLELHDNKLKLLPDEIGGMKELQTLYLGYNEFESFPTVIVKLKNLQHLFL 212

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
            G  L +LP  ++  L S+  + L +N+F  +P+                         +
Sbjct: 213 GGNKLETLPVEIV-KLKSLQKLNLLKNRFEIFPN-------------------------V 246

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
               +NL  +N+ +N L +LP  +G    L EL L  N+       +  L NL++L LSN
Sbjct: 247 VGELENLKILNLSNNKLETLPDTIGELENLQELYLLKNRFEIFPNVVGELENLKILNLSN 306

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N LK LPS IG L  L+ L L  NKLE+LP  IG L+ L+ L L  N+L +LP  I  L 
Sbjct: 307 NKLKILPSEIGKLENLQHLLLINNKLETLPAAIGELQNLRELNLGGNKLETLPIEIEKLA 366

Query: 496 -NLSYLSVGENNLQSIPE 512
            +L  L++  NN+  + +
Sbjct: 367 GSLRLLNLRGNNISEVGD 384



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 168/325 (51%), Gaps = 3/325 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++  + + +  I  +   V +L  LE+L L  N L +LP +IG + NL  LGL  N L +
Sbjct: 45  DVTEISICRQGIRFIGSDVGRLVKLEKLDLSFNNLETLPPEIGELKNLQHLGLYGNRLRT 104

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  L+ L+ LDLR+N+    P V+ KL +L+ L L  N+      +I  L  L  L
Sbjct: 105 LPSEVEELKNLQHLDLRYNEFESFPTVIRKLKNLERLILNGNKFGLFPIEIAELKKLQRL 164

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + DNK++ LP E+G +K L TL L +N  E  P  I     L  L L  N+L  +P  +
Sbjct: 165 ELHDNKLKLLPDEIGGMKELQTLYLGYNEFESFPTVIVKLKNLQHLFLGGNKLETLPVEI 224

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
             L +L +L L  NR E  P  + +  +L   N+    L +LPD  +  L ++  + L +
Sbjct: 225 VKLKSLQKLNLLKNRFEIFPNVVGELENLKILNLSNNKLETLPD-TIGELENLQELYLLK 283

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+F  +P+    +  ++  +N  +N++  +P  I  + +NL  + + +N L +LP  +G 
Sbjct: 284 NRFEIFPN-VVGELENLKILNLSNNKLKILPSEI-GKLENLQHLLLINNKLETLPAAIGE 341

Query: 402 WVGLTELNLGTNQISKLSEDIQNLV 426
              L ELNLG N++  L  +I+ L 
Sbjct: 342 LQNLRELNLGGNKLETLPIEIEKLA 366



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 163/339 (48%), Gaps = 33/339 (9%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD- 164
           LDLS +++  LPP + +L +L+ L LYGN+L +LPS++  + NL  L L  N   S P  
Sbjct: 72  LDLSFNNLETLPPEIGELKNLQHLGLYGNRLRTLPSEVEELKNLQHLDLRYNEFESFPTV 131

Query: 165 ----------------------SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
                                  +A L++L+ L+L  NKL  LP  +  +  L+ LYL +
Sbjct: 132 IRKLKNLERLILNGNKFGLFPIEIAELKKLQRLELHDNKLKLLPDEIGGMKELQTLYLGY 191

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
           N  ++    I  L NL  L +  NK+  LP E+ +LK+L  L+L  N  E  P  +G   
Sbjct: 192 NEFESFPTVIVKLKNLQHLFLGGNKLETLPVEIVKLKSLQKLNLLKNRFEIFPNVVGELE 251

Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
            L  L+L +N+L  +PD +G L NL  L L  NR E  P  + +  +L   N+    L  
Sbjct: 252 NLKILNLSNNKLETLPDTIGELENLQELYLLKNRFEIFPNVVGELENLKILNLSNNKLKI 311

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LP   +  L ++ ++ L  NK    P+    +  ++  +N   N+++ +P  I   A +L
Sbjct: 312 LPSE-IGKLENLQHLLLINNKLETLPA-AIGELQNLRELNLGGNKLETLPIEIEKLAGSL 369

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
             +N++ N ++         VG  E  +G  ++ ++  D
Sbjct: 370 RLLNLRGNNISE--------VGDGERTVGWRELREIFGD 400



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 127/247 (51%), Gaps = 23/247 (9%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +LDL  +     P  + KL +LE L L GNK    P +I  +  L  L L +N L 
Sbjct: 113 KNLQHLDLRYNEFESFPTVIRKLKNLERLILNGNKFGLFPIEIAELKKLQRLELHDNKLK 172

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKT------------- 207
            LPD +  +++L+ L L +N+    P V+ KL +L+ L+L  N+++T             
Sbjct: 173 LLPDEIGGMKELQTLYLGYNEFESFPTVIVKLKNLQHLFLGGNKLETLPVEIVKLKSLQK 232

Query: 208 ---------VHPDI-QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
                    + P++   L NL +L++ +NK+  LP  +GEL+NL  L L  N  E  P  
Sbjct: 233 LNLLKNRFEIFPNVVGELENLKILNLSNNKLETLPDTIGELENLQELYLLKNRFEIFPNV 292

Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
           +G    L  L+L +N+L  +P  +G L NL  L L  N+LE++P  + +  +L E N+ G
Sbjct: 293 VGELENLKILNLSNNKLKILPSEIGKLENLQHLLLINNKLETLPAAIGELQNLRELNLGG 352

Query: 318 CALSSLP 324
             L +LP
Sbjct: 353 NKLETLP 359



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 102/183 (55%), Gaps = 1/183 (0%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            K +N+ +L L  + +  LP  + KL  L++L L  N+    P+ +G + NL  L L+ N
Sbjct: 202 VKLKNLQHLFLGGNKLETLPVEIVKLKSLQKLNLLKNRFEIFPNVVGELENLKILNLSNN 261

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L +LPD++  L+ L+ L L  N+    P VV +L +LKIL L  N++K +  +I  L N
Sbjct: 262 KLETLPDTIGELENLQELYLLKNRFEIFPNVVGELENLKILNLSNNKLKILPSEIGKLEN 321

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN-CTMLVTLDLQHNELVN 276
           L  L + +NK+  LP  +GEL+NL  L+L  N LE LP EI      L  L+L+ N +  
Sbjct: 322 LQHLLLINNKLETLPAAIGELQNLRELNLGGNKLETLPIEIEKLAGSLRLLNLRGNNISE 381

Query: 277 IPD 279
           + D
Sbjct: 382 VGD 384


>gi|354483191|ref|XP_003503778.1| PREDICTED: leucine-rich repeat-containing protein 1-like
           [Cricetulus griseus]
          Length = 526

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 195/391 (49%), Gaps = 28/391 (7%)

Query: 170 QQLRVLDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKI 228
           + + V+D RH  L  +P  +Y+   SL+ L L  N+++ +      L  L  L + DN+I
Sbjct: 12  RHVEVIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 229 RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLT 288
           + LPPE+     LV LD++ N + E+P+ I  C  L   D   N L  +P+    L NLT
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLT 131

Query: 289 RLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
            L ++   L+S+PE +    +L    +    L+ LPD L                     
Sbjct: 132 CLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL--------------------- 170

Query: 349 SGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
               TQ   +  ++  +N+I  +P  I +   +L  + +  N L+ LP ++G    L  L
Sbjct: 171 ----TQLRRLEELDLGNNEIYNLPESIGA-LLHLKDLWLDGNQLSELPQEIGNLKSLLCL 225

Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           ++  N++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L L++N+L  LP  I
Sbjct: 226 DVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKLDQNRLTQLPEAI 285

Query: 469 GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH-TLYLND 527
           G  + L  L+L  N+L++LP++IG L  LS L+   N L S+P+E+  L     T++   
Sbjct: 286 GDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEVADLGCCSLTVFCVR 345

Query: 528 NTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           N  L  IP E++    L ++ +    L  +P
Sbjct: 346 NNRLTRIPSEVSQAMELHVLDVAGNRLRHLP 376



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 170/352 (48%), Gaps = 60/352 (17%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L ELP++      L  L L  NE+  +P  + N + L  L +S N + 
Sbjct: 36  RSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIP 95

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQ 354
            +PE++S C  L   +  G  L+ LP+    L +LT  S+N+I+L            P  
Sbjct: 96  EIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQ---------SLPEN 146

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
             ++Y                     NL+ + +++NLLT LP  L     L EL+LG N+
Sbjct: 147 IGNLY---------------------NLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           I  L E I  L++L+ L L  N L +LP  IGNL+ L CLD+ EN+LE LP EI  L  L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKSLLCLDVSENRLERLPEEISGLTSL 245

Query: 475 QRLIL-----------------------QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
             L++                         N+L  LP AIG   NL+ L + EN L ++P
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLP 305

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELA--LCSNLQIMSLDNCPLSQIPSEI 561
           + IG L+ L  L  + N  L ++P E+A   C +L +  + N  L++IPSE+
Sbjct: 306 KSIGKLKKLSNLNADRNK-LVSLPKEVADLGCCSLTVFCVRNNRLTRIPSEV 356



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 109/313 (34%), Positives = 163/313 (52%), Gaps = 4/313 (1%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 84  LVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LK+L+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 204 LDGNQLSELPQEIGNLKSLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L+L  NRL  +PE +  C +L E  +    L +LP   +  L  ++N+   RN
Sbjct: 264 KLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKS-IGKLKKLSNLNADRN 322

Query: 343 KFTAYPSG-GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           K  + P         S+      +N++ +IP  + S+A  L  +++  N L  LPL L T
Sbjct: 323 KLVSLPKEVADLGCCSLTVFCVRNNRLTRIPSEV-SQAMELHVLDVAGNRLRHLPLSLTT 381

Query: 402 WVGLTELNLGTNQ 414
            + L  L L  NQ
Sbjct: 382 -LKLKALWLSDNQ 393



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 193/404 (47%), Gaps = 53/404 (13%)

Query: 106 LDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +D    S+ ++P  + +    LEEL L  N+L  LP Q   +  L  LGL++N +  LP 
Sbjct: 17  IDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPP 76

Query: 165 SLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFN---RIKTVHPDIQYLS----- 216
            +AN  QL  LD+  N + E+P  +    +L++     N   R+    P++Q L+     
Sbjct: 77  EIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVN 136

Query: 217 ---------------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
                          NL+ L +R+N +  LP  L +L+ L  LDL +N +  LP+ IG  
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L  L L  N+L  +P  +GNL +L  L +S NRLE +PE                   
Sbjct: 197 LHLKDLWLDGNQLSELPQEIGNLKSLLCLDVSENRLERLPEE------------------ 238

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
                 +S LTS+ ++ +S+N     P G   +   +  +  + N++ ++P  I    +N
Sbjct: 239 ------ISGLTSLTDLVISQNLLETIPDGI-GKLKKLSILKLDQNRLTQLPEAI-GDCEN 290

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL--VNLEVLVLSNNLLK 439
           L+++ + +N L +LP  +G    L+ LN   N++  L +++ +L   +L V  + NN L 
Sbjct: 291 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEVADLGCCSLTVFCVRNNRLT 350

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           ++PS +    +L  LD+  N+L  LP  +  LK L+ L L  NQ
Sbjct: 351 RIPSEVSQAMELHVLDVAGNRLRHLPLSLTTLK-LKALWLSDNQ 393



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 168/362 (46%), Gaps = 31/362 (8%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + I  LPP +     L EL +  N +  +P  I +   L     + N LT LP+S
Sbjct: 64  LGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPES 123

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
              LQ L  L +    L  LP  +  L +L  L LR N +  +   +  L  L  L + +
Sbjct: 124 FPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGN 183

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N+I  LP  +G L +L  L L  N L ELP+EIGN   L+ LD+  N L  +P+ +  L 
Sbjct: 184 NEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKSLLCLDVSENRLERLPEEISGLT 243

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +LT L +S N LE++P+ + K   L+   ++   L+ LP+  +    ++  + L+ N+  
Sbjct: 244 SLTDLVISQNLLETIPDGIGKLKKLSILKLDQNRLTQLPEA-IGDCENLTELVLTENRLL 302

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP---LDLGTW 402
             P                             + K LS +N   N L SLP    DLG  
Sbjct: 303 TLPKS-------------------------IGKLKKLSNLNADRNKLVSLPKEVADLGC- 336

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
             LT   +  N+++++  ++   + L VL ++ N L+ LP S+  L KLK L L +N+ +
Sbjct: 337 CSLTVFCVRNNRLTRIPSEVSQAMELHVLDVAGNRLRHLPLSLTTL-KLKALWLSDNQSQ 395

Query: 463 SL 464
            L
Sbjct: 396 PL 397



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 127/225 (56%), Gaps = 2/225 (0%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +L+L ++ +T+LP S+ +L  LEEL L  N++ +LP  IG + +L  L L  N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + NL+ L  LD+  N+L  LP  +  LTSL  L +  N ++T+   I  L  LS+L
Sbjct: 212 LPQEIGNLKSLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++ +LP  +G+ +NL  L L  N L  LPK IG    L  L+   N+LV++P  +
Sbjct: 272 KLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEV 331

Query: 282 GNL--INLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
            +L   +LT   +  NRL  +P  +S+ + L+  +V G  L  LP
Sbjct: 332 ADLGCCSLTVFCVRNNRLTRIPSEVSQAMELHVLDVAGNRLRHLP 376


>gi|3894383|gb|AAC78591.1| disease resistance protein [Solanum lycopersicum var. cerasiforme]
          Length = 968

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 160/462 (34%), Positives = 239/462 (51%), Gaps = 47/462 (10%)

Query: 105 NLDLSKSSITH-LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS- 161
           NLDLS ++I+  +PP +  LT+L  L L  N++  ++P QIG +  L  + +  N L   
Sbjct: 99  NLDLSNNNISGTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNNHLNGF 158

Query: 162 LPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLS 219
           +P+ +  L+ L  L L  N L   +P  +  +T+L  L+L  N++    P+ I YL +L+
Sbjct: 159 IPEEIGYLRSLTKLSLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGYLRSLT 218

Query: 220 MLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN- 276
            LS+  N +   +P  LG L NL  L L +N L   +P+EIG    L  L L  N L   
Sbjct: 219 KLSLDINFLSGSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFLSGS 278

Query: 277 IPDMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCAL-SSLPDGLLSSLTSI 334
           IP  LGNL NL+RL L  N+L  S+PE +     L   ++   AL  S+P    SSL ++
Sbjct: 279 IPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIP----SSLGNL 334

Query: 335 NNIT---LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
           NN++   L  NK +                         IP  I    ++L+ +++ +N 
Sbjct: 335 NNLSRLDLYNNKLSG-----------------------SIPEEI-GYLRSLTYLDLGENA 370

Query: 392 LT-SLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVLSNNLL-KKLPSSIGNL 448
           L  S+P  LG    L  L L  NQ+S  + E+I  L +L  L L NN L   +P+S+GNL
Sbjct: 371 LNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELYLGNNSLNGSIPASLGNL 430

Query: 449 RKLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQL-VSLPRAIGHLTNLSYLSVGENN 506
             L  L L  N+L  S+P EIG+L  L  L L +N L  S+P ++G+L NLS L +  N 
Sbjct: 431 NNLFMLYLYNNQLSGSIPEEIGYLSSLTELFLGNNSLNGSIPASLGNLNNLSRLYLYNNQ 490

Query: 507 LQ-SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIM 547
           L  SIP   G + NL TL+L+DN  +  IP  +   ++L+++
Sbjct: 491 LSGSIPASFGNMRNLQTLFLSDNDLIGEIPSFVCNLTSLEVL 532



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 169/535 (31%), Positives = 263/535 (49%), Gaps = 52/535 (9%)

Query: 92  EKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLT 150
           E  +LR   +  L ++    SI   P S+  +T+L  L+LY N+L+  +P +IGY+ +LT
Sbjct: 162 EIGYLRSLTKLSLGINFLSGSI---PASLGNMTNLSFLFLYENQLSGFIPEEIGYLRSLT 218

Query: 151 CLGLAENSLT-SLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTV 208
            L L  N L+ S+P SL NL  L  L L +N+L   +P  +  L SL  L L  N +   
Sbjct: 219 KLSLDINFLSGSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFLSGS 278

Query: 209 HP-DIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLV 265
            P  +  L+NLS L + +NK+   +P E+G L++L  LDL  N L   +P  +GN   L 
Sbjct: 279 IPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPSSLGNLNNLS 338

Query: 266 TLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALS-S 322
            LDL +N+L   IP+ +G L +LT L L  N L  S+P +L    +L    +    LS S
Sbjct: 339 RLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGS 398

Query: 323 LPD--GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID-KIPYGIFSRA 379
           +P+  G LSSLT +    L  N              +++ +   +NQ+   IP  I    
Sbjct: 399 IPEEIGYLSSLTEL---YLGNNSLNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEI-GYL 454

Query: 380 KNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVLSNN- 436
            +L+++ + +N L  S+P  LG    L+ L L  NQ+S  +     N+ NL+ L LS+N 
Sbjct: 455 SSLTELFLGNNSLNGSIPASLGNLNNLSRLYLYNNQLSGSIPASFGNMRNLQTLFLSDND 514

Query: 437 LLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHL 494
           L+ ++PS + NL  L+ L +  N L+  +P  +G + +L  L + SN     LP +I +L
Sbjct: 515 LIGEIPSFVCNLTSLEVLYMSRNNLKGKVPQCLGNISDLHILSMSSNSFRGELPSSISNL 574

Query: 495 TNLSYLSVGENNLQ-SIPEEIGTLENLH------------------------TLYLNDNT 529
           T+L  L  G NNL+ +IP+  G + +L                         +L L+ N 
Sbjct: 575 TSLKILDFGRNNLEGAIPQFFGNISSLQVFDMQNNKLSGTLPTNFSIGCSLISLNLHGNE 634

Query: 530 CLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYL---KMQGPYRT 581
             + IP  L  C  LQ++ L +  L+      +   P L +  L   K+ GP R+
Sbjct: 635 LADEIPRSLDNCKKLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNKLHGPIRS 689



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 132/367 (35%), Positives = 197/367 (53%), Gaps = 37/367 (10%)

Query: 207 TVHPDIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLEE-LPKEIGNCTML 264
           T+ P+I  L+NL  L +  N+I   +PP++G L  L  + + +NHL   +P+EIG    L
Sbjct: 110 TIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNNHLNGFIPEEIGYLRSL 169

Query: 265 VTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALS- 321
             L L  N L   IP  LGN+ NL+ L L  N+L   +PE +     L + +++   LS 
Sbjct: 170 TKLSLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGYLRSLTKLSLDINFLSG 229

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
           S+P    +SL ++NN++                F  +Y+     +  ++I Y      ++
Sbjct: 230 SIP----ASLGNLNNLS----------------FLYLYNNQLSGSIPEEIGY-----LRS 264

Query: 382 LSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVLSNNLL- 438
           L+K+++  N L+ S+P  LG    L+ L+L  N++S  + E+I  L +L  L L  N L 
Sbjct: 265 LTKLSLGINFLSGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALN 324

Query: 439 KKLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQL-VSLPRAIGHLTN 496
             +PSS+GNL  L  LDL  NKL  S+P EIG+L+ L  L L  N L  S+P ++G+L N
Sbjct: 325 GSIPSSLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNN 384

Query: 497 LSYLSVGENNLQ-SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           L  L +  N L  SIPEEIG L +L  LYL +N+   +IP  L   +NL ++ L N  LS
Sbjct: 385 LFMLYLYNNQLSGSIPEEIGYLSSLTELYLGNNSLNGSIPASLGNLNNLFMLYLYNNQLS 444

Query: 556 -QIPSEI 561
             IP EI
Sbjct: 445 GSIPEEI 451



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 149/482 (30%), Positives = 237/482 (49%), Gaps = 67/482 (13%)

Query: 98  CKEENILNLDLSKSSI--THLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGL 154
           C    +  L+++ +S+  T        L  LE L L  N +  ++P +IG +TNL  L L
Sbjct: 67  CLNGRVNTLNITNASVIGTLYAFPFSSLPFLENLDLSNNNISGTIPPEIGNLTNLVYLDL 126

Query: 155 AENSLT-SLPDSLANLQQLRVLDLRHNKLNE-LPMVVYKLTSLKILYLRFNRIKTVHP-D 211
             N ++ ++P  + +L +L+++ + +N LN  +P  +  L SL  L L  N +    P  
Sbjct: 127 NTNQISGTIPPQIGSLAKLQIIRIFNNHLNGFIPEEIGYLRSLTKLSLGINFLSGSIPAS 186

Query: 212 IQYLSNLSMLSMRDNKIRE-LPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDL 269
           +  ++NLS L + +N++   +P E+G L++L  L L  N L   +P  +GN   L  L L
Sbjct: 187 LGNMTNLSFLFLYENQLSGFIPEEIGYLRSLTKLSLDINFLSGSIPASLGNLNNLSFLYL 246

Query: 270 QHNELVN-IPDMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALS-SLPD- 325
            +N+L   IP+ +G L +LT+L L  N L  S+P +L    +L+  ++    LS S+P+ 
Sbjct: 247 YNNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSRLDLYNNKLSGSIPEE 306

Query: 326 -GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
            G L SLT ++   L  N                            IP  +     NLS+
Sbjct: 307 IGYLRSLTYLD---LGENALNG-----------------------SIPSSL-GNLNNLSR 339

Query: 385 VNMKDNLLT-SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
           +++ +N L+ S+P ++G    LT L+LG N ++                        +P+
Sbjct: 340 LDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNG----------------------SIPA 377

Query: 444 SIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQL-VSLPRAIGHLTNLSYLS 501
           S+GNL  L  L L  N+L  S+P EIG+L  L  L L +N L  S+P ++G+L NL  L 
Sbjct: 378 SLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELYLGNNSLNGSIPASLGNLNNLFMLY 437

Query: 502 VGENNLQ-SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS-QIPS 559
           +  N L  SIPEEIG L +L  L+L +N+   +IP  L   +NL  + L N  LS  IP+
Sbjct: 438 LYNNQLSGSIPEEIGYLSSLTELFLGNNSLNGSIPASLGNLNNLSRLYLYNNQLSGSIPA 497

Query: 560 EI 561
             
Sbjct: 498 SF 499



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 151/486 (31%), Positives = 250/486 (51%), Gaps = 52/486 (10%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLT-SL 162
           LDL ++++   +P S+  L +L  LYLY N+L  S+P +IGY+++LT L L  NSL  S+
Sbjct: 364 LDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELYLGNNSLNGSI 423

Query: 163 PDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSM 220
           P SL NL  L +L L +N+L   +P  +  L+SL  L+L  N +    P  +  L+NLS 
Sbjct: 424 PASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELFLGNNSLNGSIPASLGNLNNLSR 483

Query: 221 LSMRDNKIR-ELPPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNELVN-I 277
           L + +N++   +P   G ++NL TL L+ N L  E+P  + N T L  L +  N L   +
Sbjct: 484 LYLYNNQLSGSIPASFGNMRNLQTLFLSDNDLIGEIPSFVCNLTSLEVLYMSRNNLKGKV 543

Query: 278 PDMLGNLINLTRLRLSYNRLES-VPETLS-----KCVHLNEFNVEGCALSSLPDGLLSSL 331
           P  LGN+ +L  L +S N     +P ++S     K +     N+EG    ++P     ++
Sbjct: 544 PQCLGNISDLHILSMSSNSFRGELPSSISNLTSLKILDFGRNNLEG----AIPQ-FFGNI 598

Query: 332 TSINNITLSRNKFTAYPSGGPTQFT---SVYSINFEHNQI-DKIPYGIFSRAKNLSKVNM 387
           +S+    +  NK +      PT F+   S+ S+N   N++ D+IP  +    K L  +++
Sbjct: 599 SSLQVFDMQNNKLSGTL---PTNFSIGCSLISLNLHGNELADEIPRSL-DNCKKLQVLDL 654

Query: 388 KDNLLT-SLPLDLGTWVGLTELNLGTNQ----ISKLSEDIQNLVNLEVLVLSNNLLKK-L 441
            DN L  + P+ LGT   L  L L +N+    I     +I    +L ++ LS N   + L
Sbjct: 655 GDNQLNDTFPMWLGTLPELRVLRLTSNKLHGPIRSSGAEIM-FPDLRIIDLSRNAFSQDL 713

Query: 442 PSSIG-NLRKLKCLD--LEENKLESLPNEI------GFLKELQRLI-------LQSNQLV 485
           P+S+  +L+ ++ +D  +EE   ES  ++       G   E+ R++       L SN+  
Sbjct: 714 PTSLFEHLKGMRTVDKTMEEPSYESYYDDSVVVVTKGLELEIVRILSLYTIIDLSSNKFE 773

Query: 486 S-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
             +P  +G L  +  L+V  N LQ  IP  +G+L  L +L L+ N     IP +LA  + 
Sbjct: 774 GHIPSVLGDLIAIRVLNVSHNALQGYIPSSLGSLSILESLDLSFNQLSGEIPQQLASLTF 833

Query: 544 LQIMSL 549
           L++++L
Sbjct: 834 LEVLNL 839


>gi|395512688|ref|XP_003760567.1| PREDICTED: protein scribble homolog [Sarcophilus harrisii]
          Length = 1789

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 203/417 (48%), Gaps = 29/417 (6%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++ ++D    S+  +P  + + +  LEEL L  N+L  LP     + NL  LG
Sbjct: 7   LWRCNR-HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N + E+P  +    +L+I     N +  +     
Sbjct: 66  LSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFT 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L +L+ L++ D  ++ LP ++G L NLVTL+L  N L+ LP  +     L  LDL  N+
Sbjct: 126 QLRSLAHLALNDVSLQVLPGDVGNLANLVTLELRENLLKSLPTSLSFLVKLEQLDLGGND 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L  +PD LG L NL  L L  N+L ++P  L     L   +V    L  LP   +S LT 
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENKLEHLP-AEVSGLTL 244

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ LS+N     P  G  Q   +  +  + N++ ++   I    +NLS++ + +N+LT
Sbjct: 245 LTDLLLSQNLLERLPD-GIGQLKQLSILKVDQNRLCEVTEAI-GECENLSELILTENMLT 302

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP  LG    LT LN+  N+                       L  LP+ +G    L  
Sbjct: 303 ALPRSLGKLTKLTNLNVDRNR-----------------------LGTLPAEVGGCTSLNV 339

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L L +N+L SLP E+    EL  L +  N+L SLP A+ HL NL  L + EN  Q +
Sbjct: 340 LSLRDNRLASLPPELAGTTELHVLDVAGNRLQSLPFALTHL-NLKALWLAENQAQPM 395



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 177/411 (43%), Gaps = 95/411 (23%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           +D RH  L  +P  +Y+                      Y  +L  L +  N++RELP  
Sbjct: 17  VDKRHCSLQAVPEEIYR----------------------YSRSLEELLLDANQLRELPKP 54

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
              L NL  L L+ N ++ LP E+ N   LV LD+  N   +IP+               
Sbjct: 55  FFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRN---DIPE--------------- 96

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
                +PE++  C  L   +  G  LS LPDG                          TQ
Sbjct: 97  -----IPESIKFCKALEIADFSGNPLSRLPDGF-------------------------TQ 126

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
             S+  +      +  +P G      NL  + +++NLL SLP  L   V L +L+LG N 
Sbjct: 127 LRSLAHLALNDVSLQVLP-GDVGNLANLVTLELRENLLKSLPTSLSFLVKLEQLDLGGND 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE------- 467
           +  L + +  L NL  L L  N L  LP  +GNLR+L CLD+ ENKLE LP E       
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENKLEHLPAEVSGLTLL 245

Query: 468 ----------------IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
                           IG LK+L  L +  N+L  +  AIG   NLS L + EN L ++P
Sbjct: 246 TDLLLSQNLLERLPDGIGQLKQLSILKVDQNRLCEVTEAIGECENLSELILTENMLTALP 305

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
             +G L  L  L ++ N  L  +P E+  C++L ++SL +  L+ +P E+ 
Sbjct: 306 RSLGKLTKLTNLNVDRNR-LGTLPAEVGGCTSLNVLSLRDNRLASLPPELA 355



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 115/348 (33%), Positives = 175/348 (50%), Gaps = 15/348 (4%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
            ++ LD+S++ I  +P S++    LE     GN L+ LP     + +L  L L + SL  
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQV 142

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + NL  L  L+LR N L  LP  +  L  L+ L L  N ++ +   +  L NL  L
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  LPPELG L+ LV LD++ N LE LP E+   T+L  L L  N L  +PD +
Sbjct: 203 WLDRNQLSTLPPELGNLRRLVCLDVSENKLEHLPAEVSGLTLLTDLLLSQNLLERLPDGI 262

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  L+ L++  NRL  V E + +C +L+E  +    L++LP   L  LT + N+ + R
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGECENLSELILTENMLTALPRS-LGKLTKLTNLNVDR 321

Query: 342 NKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           N+    P+  GG    TS+  ++   N++  +P  +      L  +++  N L SLP  L
Sbjct: 322 NRLGTLPAEVGG---CTSLNVLSLRDNRLASLPPELAG-TTELHVLDVAGNRLQSLPFAL 377

Query: 400 GTWVGLTELNLGTNQISKL----SEDIQNLVNLEVLVLSNNLLKKLPS 443
            T + L  L L  NQ   +    +ED Q        VL+  LL + PS
Sbjct: 378 -THLNLKALWLAENQAQPMLKFQTEDDQKTGE---KVLTCYLLPQQPS 421


>gi|124010200|ref|ZP_01694856.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123983744|gb|EAY24171.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 356

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/341 (33%), Positives = 170/341 (49%), Gaps = 49/341 (14%)

Query: 188 VVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLA 247
           +V+  + LK + LR + +  +   I    +L  L++   +++ELP E+GEL+NL  L L+
Sbjct: 44  LVHSSSGLKSMVLRNDSLTVLSSRIAEFKSLKRLTIECKQLKELPEEIGELENLEILTLS 103

Query: 248 HNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKC 307
            + L  LPK IG    L  LDL   +L+++P  +GNL NL +LR+  N+L  +P+ +   
Sbjct: 104 GSKLTSLPKSIGKLKKLKILDLNRGKLISLPKEIGNLTNLYKLRVGLNQLVELPKEIG-- 161

Query: 308 VHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQ 367
                                                         Q  ++ S+    NQ
Sbjct: 162 ----------------------------------------------QLKNLISLTLNGNQ 175

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
           + ++P  I S  K L+ + +  N L  LP  +G    L  L+LG N +  L ++IQ L N
Sbjct: 176 LVELPQEIGSLGK-LALLYLGGNKLECLPKSIGNLRELESLHLGYNNLKGLPDEIQQLTN 234

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           L  L L NN L  LP+ IG L+KLK + L++N+L  LP EIG L  LQ L L++N+L  L
Sbjct: 235 LGWLYLENNQLTALPAGIGGLKKLKKMGLQDNRLRKLPKEIGQLGNLQELNLKNNRLRRL 294

Query: 488 PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           P  I  LT+L    +  N L+++PEEIG L NL  LYL  N
Sbjct: 295 PEEIDQLTSLREFDLENNRLRNLPEEIGQLANLQKLYLEHN 335



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 119/211 (56%), Gaps = 5/211 (2%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L +  + +  LP  + +L +L  L L GN+L  LP +IG +  L  L L  N L  
Sbjct: 142 NLYKLRVGLNQLVELPKEIGQLKNLISLTLNGNQLVELPQEIGSLGKLALLYLGGNKLEC 201

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP S+ NL++L  L L +N L  LP  + +LT+L  LYL  N++  +   I  L  L  +
Sbjct: 202 LPKSIGNLRELESLHLGYNNLKGLPDEIQQLTNLGWLYLENNQLTALPAGIGGLKKLKKM 261

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            ++DN++R+LP E+G+L NL  L+L +N L  LP+EI   T L   DL++N L N+P+ +
Sbjct: 262 GLQDNRLRKLPKEIGQLGNLQELNLKNNRLRRLPEEIDQLTSLREFDLENNRLRNLPEEI 321

Query: 282 GNLINLTRLRLSYNRL-----ESVPETLSKC 307
           G L NL +L L +NR        + + L KC
Sbjct: 322 GQLANLQKLYLEHNRFSKAKQRKIRQWLPKC 352



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 155/294 (52%), Gaps = 3/294 (1%)

Query: 147 TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK 206
           + L  + L  +SLT L   +A  + L+ L +   +L ELP  + +L +L+IL L  +++ 
Sbjct: 49  SGLKSMVLRNDSLTVLSSRIAEFKSLKRLTIECKQLKELPEEIGELENLEILTLSGSKLT 108

Query: 207 TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
           ++   I  L  L +L +   K+  LP E+G L NL  L +  N L ELPKEIG    L++
Sbjct: 109 SLPKSIGKLKKLKILDLNRGKLISLPKEIGNLTNLYKLRVGLNQLVELPKEIGQLKNLIS 168

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           L L  N+LV +P  +G+L  L  L L  N+LE +P+++     L   ++    L  LPD 
Sbjct: 169 LTLNGNQLVELPQEIGSLGKLALLYLGGNKLECLPKSIGNLRELESLHLGYNNLKGLPDE 228

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
           +   LT++  + L  N+ TA P+G       +  +  + N++ K+P  I  +  NL ++N
Sbjct: 229 I-QQLTNLGWLYLENNQLTALPAG-IGGLKKLKKMGLQDNRLRKLPKEI-GQLGNLQELN 285

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
           +K+N L  LP ++     L E +L  N++  L E+I  L NL+ L L +N   K
Sbjct: 286 LKNNRLRRLPEEIDQLTSLREFDLENNRLRNLPEEIGQLANLQKLYLEHNRFSK 339



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/263 (36%), Positives = 134/263 (50%), Gaps = 1/263 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN+  L LS S +T LP S+ KL  L+ L L   KL SLP +IG +TNL  L +  N L 
Sbjct: 95  ENLEILTLSGSKLTSLPKSIGKLKKLKILDLNRGKLISLPKEIGNLTNLYKLRVGLNQLV 154

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP  +  L+ L  L L  N+L ELP  +  L  L +LYL  N+++ +   I  L  L  
Sbjct: 155 ELPKEIGQLKNLISLTLNGNQLVELPQEIGSLGKLALLYLGGNKLECLPKSIGNLRELES 214

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L +  N ++ LP E+ +L NL  L L +N L  LP  IG    L  + LQ N L  +P  
Sbjct: 215 LHLGYNNLKGLPDEIQQLTNLGWLYLENNQLTALPAGIGGLKKLKKMGLQDNRLRKLPKE 274

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L L  NRL  +PE + +   L EF++E   L +LP+  +  L ++  + L 
Sbjct: 275 IGQLGNLQELNLKNNRLRRLPEEIDQLTSLREFDLENNRLRNLPEE-IGQLANLQKLYLE 333

Query: 341 RNKFTAYPSGGPTQFTSVYSINF 363
            N+F+        Q+     I F
Sbjct: 334 HNRFSKAKQRKIRQWLPKCRIPF 356



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 156/293 (53%), Gaps = 4/293 (1%)

Query: 264 LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSL 323
           L ++ L+++ L  +   +    +L RL +   +L+ +PE + +  +L    + G  L+SL
Sbjct: 51  LKSMVLRNDSLTVLSSRIAEFKSLKRLTIECKQLKELPEEIGELENLEILTLSGSKLTSL 110

Query: 324 PDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
           P  +   L  +  + L+R K  + P       T++Y +    NQ+ ++P  I  + KNL 
Sbjct: 111 PKSI-GKLKKLKILDLNRGKLISLPKE-IGNLTNLYKLRVGLNQLVELPKEI-GQLKNLI 167

Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
            + +  N L  LP ++G+   L  L LG N++  L + I NL  LE L L  N LK LP 
Sbjct: 168 SLTLNGNQLVELPQEIGSLGKLALLYLGGNKLECLPKSIGNLRELESLHLGYNNLKGLPD 227

Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
            I  L  L  L LE N+L +LP  IG LK+L+++ LQ N+L  LP+ IG L NL  L++ 
Sbjct: 228 EIQQLTNLGWLYLENNQLTALPAGIGGLKKLKKMGLQDNRLRKLPKEIGQLGNLQELNLK 287

Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQ 556
            N L+ +PEEI  L +L    L +N  L N+P E+   +NLQ + L++   S+
Sbjct: 288 NNRLRRLPEEIDQLTSLREFDLENNR-LRNLPEEIGQLANLQKLYLEHNRFSK 339



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 135/259 (52%), Gaps = 2/259 (0%)

Query: 112 SITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQ 171
            +  LP  + +L +LE L L G+KL SLP  IG +  L  L L    L SLP  + NL  
Sbjct: 83  QLKELPEEIGELENLEILTLSGSKLTSLPKSIGKLKKLKILDLNRGKLISLPKEIGNLTN 142

Query: 172 LRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
           L  L +  N+L ELP  + +L +L  L L  N++  +  +I  L  L++L +  NK+  L
Sbjct: 143 LYKLRVGLNQLVELPKEIGQLKNLISLTLNGNQLVELPQEIGSLGKLALLYLGGNKLECL 202

Query: 232 PPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLR 291
           P  +G L+ L +L L +N+L+ LP EI   T L  L L++N+L  +P  +G L  L ++ 
Sbjct: 203 PKSIGNLRELESLHLGYNNLKGLPDEIQQLTNLGWLYLENNQLTALPAGIGGLKKLKKMG 262

Query: 292 LSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGG 351
           L  NRL  +P+ + +  +L E N++   L  LP+  +  LTS+    L  N+    P   
Sbjct: 263 LQDNRLRKLPKEIGQLGNLQELNLKNNRLRRLPEE-IDQLTSLREFDLENNRLRNLPE-E 320

Query: 352 PTQFTSVYSINFEHNQIDK 370
             Q  ++  +  EHN+  K
Sbjct: 321 IGQLANLQKLYLEHNRFSK 339



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 94/283 (33%), Positives = 146/283 (51%), Gaps = 3/283 (1%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L   S+T L   + +   L+ L +   +L  LP +IG + NL  L L+ + LTSLP S+ 
Sbjct: 56  LRNDSLTVLSSRIAEFKSLKRLTIECKQLKELPEEIGELENLEILTLSGSKLTSLPKSIG 115

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
            L++L++LDL   KL  LP  +  LT+L  L +  N++  +  +I  L NL  L++  N+
Sbjct: 116 KLKKLKILDLNRGKLISLPKEIGNLTNLYKLRVGLNQLVELPKEIGQLKNLISLTLNGNQ 175

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           + ELP E+G L  L  L L  N LE LPK IGN   L +L L +N L  +PD +  L NL
Sbjct: 176 LVELPQEIGSLGKLALLYLGGNKLECLPKSIGNLRELESLHLGYNNLKGLPDEIQQLTNL 235

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L L  N+L ++P  +     L +  ++   L  LP   +  L ++  + L  N+    
Sbjct: 236 GWLYLENNQLTALPAGIGGLKKLKKMGLQDNRLRKLPKE-IGQLGNLQELNLKNNRLRRL 294

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           P     Q TS+   + E+N++  +P  I   A NL K+ ++ N
Sbjct: 295 PE-EIDQLTSLREFDLENNRLRNLPEEIGQLA-NLQKLYLEHN 335



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 133/278 (47%), Gaps = 26/278 (9%)

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
           C        +  A  S  D L+ S + + ++ L  +  T   S    +F S+  +  E  
Sbjct: 24  CFSWQASAGQAKAFFSWQDALVHSSSGLKSMVLRNDSLTVLSSR-IAEFKSLKRLTIECK 82

Query: 367 QIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL-----------------------DLGTWV 403
           Q+ ++P  I    +NL  + +  + LTSLP                        ++G   
Sbjct: 83  QLKELPEEI-GELENLEILTLSGSKLTSLPKSIGKLKKLKILDLNRGKLISLPKEIGNLT 141

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            L +L +G NQ+ +L ++I  L NL  L L+ N L +LP  IG+L KL  L L  NKLE 
Sbjct: 142 NLYKLRVGLNQLVELPKEIGQLKNLISLTLNGNQLVELPQEIGSLGKLALLYLGGNKLEC 201

Query: 464 LPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           LP  IG L+EL+ L L  N L  LP  I  LTNL +L +  N L ++P  IG L+ L  +
Sbjct: 202 LPKSIGNLRELESLHLGYNNLKGLPDEIQQLTNLGWLYLENNQLTALPAGIGGLKKLKKM 261

Query: 524 YLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            L DN  L  +P E+    NLQ ++L N  L ++P EI
Sbjct: 262 GLQDNR-LRKLPKEIGQLGNLQELNLKNNRLRRLPEEI 298



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 109/209 (52%), Gaps = 24/209 (11%)

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
           +  L  + ++++ LT L   +  +  L  L +   Q+ +L E+I  L NLE+L LS + L
Sbjct: 48  SSGLKSMVLRNDSLTVLSSRIAEFKSLKRLTIECKQLKELPEEIGELENLEILTLSGSKL 107

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLS 498
             LP SIG L+KLK LDL   KL SLP EIG L  L +L +  NQLV LP+ IG L NL 
Sbjct: 108 TSLPKSIGKLKKLKILDLNRGKLISLPKEIGNLTNLYKLRVGLNQLVELPKEIGQLKNLI 167

Query: 499 YLSVGENNLQSIPEEIGTLENLHTLYLNDNT--C--------------------LNNIPF 536
            L++  N L  +P+EIG+L  L  LYL  N   C                    L  +P 
Sbjct: 168 SLTLNGNQLVELPQEIGSLGKLALLYLGGNKLECLPKSIGNLRELESLHLGYNNLKGLPD 227

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEIVVGG 565
           E+   +NL  + L+N  L+ +P+ I  GG
Sbjct: 228 EIQQLTNLGWLYLENNQLTALPAGI--GG 254


>gi|222618555|gb|EEE54687.1| hypothetical protein OsJ_01997 [Oryza sativa Japonica Group]
          Length = 1014

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 150/487 (30%), Positives = 242/487 (49%), Gaps = 52/487 (10%)

Query: 103 ILNLDLSKSSIT-HLPPSVEKLTHLEELYLYGNKLAS-LPSQIGYV-------------- 146
           I ++DLS +++T  +PP++  LT L  L L GNKL+  +P Q+G +              
Sbjct: 160 ISSIDLSYNNLTGEIPPALGNLTKLTYLSLLGNKLSGNIPWQLGKLHDISFIDLSLNLLV 219

Query: 147 ----------TNLTCLGLAENSLTS-LPDSLANLQQLRVLDLRHNKLN-ELPMVVYKLTS 194
                     T LT L L  N L+  +PD L  +Q L+ LDL+ N LN  +   +  LT 
Sbjct: 220 GPILSLFGNLTKLTSLFLVGNHLSGPIPDELGEIQTLQYLDLQQNNLNGSITSTLGNLTM 279

Query: 195 LKILYLRFNRIKTVHPDI-QYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE 252
           LKILY+  N+     P +   LS+L  L + +N +   +P  +G L + V   L  NH+ 
Sbjct: 280 LKILYIYLNQHTGTIPQVFGMLSSLVELDLSENHLTGSIPSSVGNLTSSVYFSLWGNHIT 339

Query: 253 -ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLES-VPETLSKCVH 309
             +P+EIGN   L  LDL  N +   +P  +GN+ +L  + ++ N L + +PE       
Sbjct: 340 GSIPQEIGNLVNLQQLDLSVNFITGPVPSTIGNMSSLNYILINSNNLSAPIPEEFGNLAS 399

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
           L  F      LS      L  L S++ I L  N+ +          T++  I  + N + 
Sbjct: 400 LISFASYENQLSGPIPPSLGKLESVSEILLFSNQLSGQLPPALFNLTNLIDIELDKNYL- 458

Query: 370 KIPYGIFSRAKNLSKVNMKDNLL-TSLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVN 427
                      NL+ ++  DN++   +P +LG    L +L+L TN+++ ++  +I  LVN
Sbjct: 459 -----------NLTALSFADNMIKGGIPSELGNLKNLVKLSLSTNRLTGEIPPEIGKLVN 507

Query: 428 LEVLVLSNNLLK-KLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQL- 484
           L ++ L NN L  K+P+ IG L+ L+ LD   N+L  ++P+++G   +LQ L + +N L 
Sbjct: 508 LNLIDLRNNQLSGKVPNQIGQLKSLEILDFSSNQLSGAIPDDLGNCFKLQSLKMSNNSLN 567

Query: 485 VSLPRAIGHLTNL-SYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
            S+P  +GH  +L S L + +NNL   IP E+G LE L  + L+ N     IP  +A   
Sbjct: 568 GSIPSTLGHFLSLQSMLDLSQNNLSGPIPSELGMLEMLMYVNLSHNQFSGAIPGSIASMQ 627

Query: 543 NLQIMSL 549
           +L +  +
Sbjct: 628 SLSVFDV 634



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 181/377 (48%), Gaps = 23/377 (6%)

Query: 208 VHPDIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLV 265
           + P I  L  +S + +  N +  E+PP LG L  L  L L  N L   +P ++G    + 
Sbjct: 150 IPPSIGDLGRISSIDLSYNNLTGEIPPALGNLTKLTYLSLLGNKLSGNIPWQLGKLHDIS 209

Query: 266 TLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSL 323
            +DL  N LV  I  + GNL  LT L L  N L   +P+ L +   L   +++   L+  
Sbjct: 210 FIDLSLNLLVGPILSLFGNLTKLTSLFLVGNHLSGPIPDELGEIQTLQYLDLQQNNLNGS 269

Query: 324 PDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI-DKIPYGIFSRAKNL 382
               L +LT +  + +  N+ T          +S+  ++   N +   IP  + +   ++
Sbjct: 270 ITSTLGNLTMLKILYIYLNQHTGTIPQVFGMLSSLVELDLSENHLTGSIPSSVGNLTSSV 329

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK-LSEDIQNLVNLE-VLVLSNNLLKK 440
                 +++  S+P ++G  V L +L+L  N I+  +   I N+ +L  +L+ SNNL   
Sbjct: 330 YFSLWGNHITGSIPQEIGNLVNLQQLDLSVNFITGPVPSTIGNMSSLNYILINSNNLSAP 389

Query: 441 LPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNL- 497
           +P   GNL  L      EN+L   +P  +G L+ +  ++L SNQL   LP A+ +LTNL 
Sbjct: 390 IPEEFGNLASLISFASYENQLSGPIPPSLGKLESVSEILLFSNQLSGQLPPALFNLTNLI 449

Query: 498 -----------SYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQ 545
                      + LS  +N ++  IP E+G L+NL  L L+ N     IP E+    NL 
Sbjct: 450 DIELDKNYLNLTALSFADNMIKGGIPSELGNLKNLVKLSLSTNRLTGEIPPEIGKLVNLN 509

Query: 546 IMSLDNCPLS-QIPSEI 561
           ++ L N  LS ++P++I
Sbjct: 510 LIDLRNNQLSGKVPNQI 526



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 213/455 (46%), Gaps = 57/455 (12%)

Query: 137 ASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTS 194
            ++P  IG +  ++ + L+ N+LT  +P +L NL +L  L L  NKL   +P  + KL  
Sbjct: 148 GNIPPSIGDLGRISSIDLSYNNLTGEIPPALGNLTKLTYLSLLGNKLSGNIPWQLGKLHD 207

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLS----MRDNKIRELPPELGELKNLVTLDLAHNH 250
           +  + L  N +  V P +    NL+ L+    + ++    +P ELGE++ L  LDL  N+
Sbjct: 208 ISFIDLSLNLL--VGPILSLFGNLTKLTSLFLVGNHLSGPIPDELGEIQTLQYLDLQQNN 265

Query: 251 LE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE-SVPETLSKC 307
           L   +   +GN TML  L +  N+    IP + G L +L  L LS N L  S+P ++   
Sbjct: 266 LNGSITSTLGNLTMLKILYIYLNQHTGTIPQVFGMLSSLVELDLSENHLTGSIPSSVGNL 325

Query: 308 VHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF---- 363
                F++ G  ++      + +L ++  + LS N F   P   P+   ++ S+N+    
Sbjct: 326 TSSVYFSLWGNHITGSIPQEIGNLVNLQQLDLSVN-FITGPV--PSTIGNMSSLNYILIN 382

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS-KLSEDI 422
            +N    IP    + A  +S  + ++ L   +P  LG    ++E+ L +NQ+S +L   +
Sbjct: 383 SNNLSAPIPEEFGNLASLISFASYENQLSGPIPPSLGKLESVSEILLFSNQLSGQLPPAL 442

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQS 481
            NL NL  + L  N L            L  L   +N ++  +P+E+G LK L +L L +
Sbjct: 443 FNLTNLIDIELDKNYLN-----------LTALSFADNMIKGGIPSELGNLKNLVKLSLST 491

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           N+L                  GE     IP EIG L NL+ + L +N     +P ++   
Sbjct: 492 NRLT-----------------GE-----IPPEIGKLVNLNLIDLRNNQLSGKVPNQIGQL 529

Query: 542 SNLQIMSLDNCPLS-QIPSEIVVGGPSLIIRYLKM 575
            +L+I+   +  LS  IP ++   G    ++ LKM
Sbjct: 530 KSLEILDFSSNQLSGAIPDDL---GNCFKLQSLKM 561


>gi|125603860|gb|EAZ43185.1| hypothetical protein OsJ_27777 [Oryza sativa Japonica Group]
          Length = 1093

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 140/447 (31%), Positives = 214/447 (47%), Gaps = 43/447 (9%)

Query: 116 LPPSVEKLTHLEELYLYGNKL--ASLPSQIGYVTNLTCLGLAENSLT-SLPDSLANLQQL 172
           +P S+  L  L+ L   GN+     LP +IG  T+LT LGLAE  ++ SLP ++ NL+++
Sbjct: 191 IPASIGNLKKLQVLRAGGNQALKGPLPPEIGGCTDLTMLGLAETGISGSLPATIGNLKKI 250

Query: 173 RVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
           + + +    L   +P  +   T L  LYL  N +                         +
Sbjct: 251 QTIAIYTAMLTGSIPESIGNCTELTSLYLYQNTLSG----------------------GI 288

Query: 232 PPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTR 289
           PP+LG+LK L T+ L  N L   +P EIGNC  LV +DL  NEL   IP   G L NL +
Sbjct: 289 PPQLGQLKKLQTVLLWQNQLVGTIPPEIGNCKELVLIDLSLNELTGPIPRSFGGLPNLQQ 348

Query: 290 LRLSYNRLESV-PETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL---SRNKFT 345
           L+LS N+L  V P  LS C  L +  V+    + L   +      + N+TL    +N+ T
Sbjct: 349 LQLSTNKLTGVIPPELSNCTSLTDIEVDN---NQLTGAIGVDFPRLRNLTLFYAWQNRLT 405

Query: 346 AYPSGGPTQFTSVYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
                   Q   + S++  +N +   IP  +F+       + + ++L   +P ++G    
Sbjct: 406 GGIPASLAQCEGLQSLDLSYNNLTGAIPRELFALQNLTKLLLLSNDLAGFIPPEIGNCTN 465

Query: 405 LTELNLGTNQISK-LSEDIQNLVNLEVLVLSNN-LLKKLPSSIGNLRKLKCLDLEENKLE 462
           L  L L  N++S  +  +I NL NL  L L  N L   LP+++     L+ +DL  N L 
Sbjct: 466 LYRLRLNGNRLSGTIPAEIGNLKNLNFLDLGGNRLTGPLPAAMSGCDNLEFMDLHSNALT 525

Query: 463 -SLPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLEN 519
            +LP ++   + LQ + +  N+L   L   IG L  L+ L++G+N +   IP E+G+ E 
Sbjct: 526 GTLPGDL--PRSLQFVDVSDNRLTGVLGAGIGSLPELTKLNLGKNRISGGIPPELGSCEK 583

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQI 546
           L  L L DN     IP EL     L+I
Sbjct: 584 LQLLDLGDNALSGGIPPELGKLPFLEI 610



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 190/403 (47%), Gaps = 15/403 (3%)

Query: 161 SLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNL 218
           ++P  L +L +L  LDL  N+L   +P  + +L  L+ L L  N ++   PD I  L+ L
Sbjct: 118 AIPKELGDLAELSTLDLTKNQLTGAIPAELCRLRKLQSLALNSNSLRGAIPDAIGNLTGL 177

Query: 219 SMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHL--EELPKEIGNCTMLVTLDLQHNELV 275
           + L++ DN++   +P  +G LK L  L    N      LP EIG CT L  L L    + 
Sbjct: 178 TSLTLYDNELSGAIPASIGNLKKLQVLRAGGNQALKGPLPPEIGGCTDLTMLGLAETGIS 237

Query: 276 N-IPDMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
             +P  +GNL  +  + +    L  S+PE++  C  L    +    LS      L  L  
Sbjct: 238 GSLPATIGNLKKIQTIAIYTAMLTGSIPESIGNCTELTSLYLYQNTLSGGIPPQLGQLKK 297

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLL 392
           +  + L +N+              +  I+   N++   IP   F    NL ++ +  N L
Sbjct: 298 LQTVLLWQNQLVGTIPPEIGNCKELVLIDLSLNELTGPIPRS-FGGLPNLQQLQLSTNKL 356

Query: 393 TS-LPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVL-VLSNNLLKKLPSSIGNLR 449
           T  +P +L     LT++ +  NQ++  +  D   L NL +     N L   +P+S+    
Sbjct: 357 TGVIPPELSNCTSLTDIEVDNNQLTGAIGVDFPRLRNLTLFYAWQNRLTGGIPASLAQCE 416

Query: 450 KLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNL 507
            L+ LDL  N L  ++P E+  L+ L +L+L SN L   +P  IG+ TNL  L +  N L
Sbjct: 417 GLQSLDLSYNNLTGAIPRELFALQNLTKLLLLSNDLAGFIPPEIGNCTNLYRLRLNGNRL 476

Query: 508 Q-SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
             +IP EIG L+NL+ L L  N     +P  ++ C NL+ M L
Sbjct: 477 SGTIPAEIGNLKNLNFLDLGGNRLTGPLPAAMSGCDNLEFMDL 519



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 184/399 (46%), Gaps = 70/399 (17%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
           +PP + +L  L+ + L+ N+L  ++P +IG    L  + L+ N LT  +P S   L  L+
Sbjct: 288 IPPQLGQLKKLQTVLLWQNQLVGTIPPEIGNCKELVLIDLSLNELTGPIPRSFGGLPNLQ 347

Query: 174 VLDLRHNKLNE-LPMVVYKLTSLKILYLRFNRI-KTVHPDIQYLSNLSMLSMRDNKIRE- 230
            L L  NKL   +P  +   TSL  + +  N++   +  D   L NL++     N++   
Sbjct: 348 QLQLSTNKLTGVIPPELSNCTSLTDIEVDNNQLTGAIGVDFPRLRNLTLFYAWQNRLTGG 407

Query: 231 LPPELGELKNLVTLDLAHNHLEE-------------------------LPKEIGNCTMLV 265
           +P  L + + L +LDL++N+L                           +P EIGNCT L 
Sbjct: 408 IPASLAQCEGLQSLDLSYNNLTGAIPRELFALQNLTKLLLLSNDLAGFIPPEIGNCTNLY 467

Query: 266 TLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALS-S 322
            L L  N L   IP  +GNL NL  L L  NRL   +P  +S C +L   ++   AL+ +
Sbjct: 468 RLRLNGNRLSGTIPAEIGNLKNLNFLDLGGNRLTGPLPAAMSGCDNLEFMDLHSNALTGT 527

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LP  L  SL  ++   +S N+ T     G                I  +P         L
Sbjct: 528 LPGDLPRSLQFVD---VSDNRLTGVLGAG----------------IGSLP--------EL 560

Query: 383 SKVNMKDNLLTS-LPLDLGTWVGLTELNLGTNQISK-LSEDIQNLVNLEV-LVLS-NNLL 438
           +K+N+  N ++  +P +LG+   L  L+LG N +S  +  ++  L  LE+ L LS N L 
Sbjct: 561 TKLNLGKNRISGGIPPELGSCEKLQLLDLGDNALSGGIPPELGKLPFLEISLNLSCNRLS 620

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
            ++PS    L KL CLD+  N+L       G L+ L RL
Sbjct: 621 GEIPSQFAGLDKLGCLDVSYNQLS------GSLEPLARL 653



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 121/245 (49%), Gaps = 13/245 (5%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
           +PP +   T+L  L L GN+L  ++P++IG + NL  L L  N LT  LP +++    L 
Sbjct: 456 IPPEIGNCTNLYRLRLNGNRLSGTIPAEIGNLKNLNFLDLGGNRLTGPLPAAMSGCDNLE 515

Query: 174 VLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTV-HPDIQYLSNLSMLSMRDNKIRE- 230
            +DL  N L   LP  + +  SL+ + +  NR+  V    I  L  L+ L++  N+I   
Sbjct: 516 FMDLHSNALTGTLPGDLPR--SLQFVDVSDNRLTGVLGAGIGSLPELTKLNLGKNRISGG 573

Query: 231 LPPELGELKNLVTLDLAHNHLEE-LPKEIGNCTML-VTLDLQHNELVN-IPDMLGNLINL 287
           +PPELG  + L  LDL  N L   +P E+G    L ++L+L  N L   IP     L  L
Sbjct: 574 IPPELGSCEKLQLLDLGDNALSGGIPPELGKLPFLEISLNLSCNRLSGEIPSQFAGLDKL 633

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS-LPDGLLSSLTSINNITLSRNKFTA 346
             L +SYN+L    E L++  +L   N+   A S  LPD        IN+I  + N    
Sbjct: 634 GCLDVSYNQLSGSLEPLARLENLVTLNISYNAFSGELPDTAFFQKLPINDI--AGNHLLV 691

Query: 347 YPSGG 351
             SGG
Sbjct: 692 VGSGG 696



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 24/123 (19%)

Query: 427 NLEVLVLSN-NLLKKLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQL 484
           +L+ LVLS  NL   +P  +G+L +L  LDL +N+L  ++P E+  L++LQ L L SN L
Sbjct: 104 SLKTLVLSGTNLTGAIPKELGDLAELSTLDLTKNQLTGAIPAELCRLRKLQSLALNSNSL 163

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
                                   +IP+ IG L  L +L L DN     IP  +     L
Sbjct: 164 RG----------------------AIPDAIGNLTGLTSLTLYDNELSGAIPASIGNLKKL 201

Query: 545 QIM 547
           Q++
Sbjct: 202 QVL 204



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)

Query: 106 LDLSKSSITH-LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-L 162
           +D+S + +T  L   +  L  L +L L  N++   +P ++G    L  L L +N+L+  +
Sbjct: 539 VDVSDNRLTGVLGAGIGSLPELTKLNLGKNRISGGIPPELGSCEKLQLLDLGDNALSGGI 598

Query: 163 PDSLANLQQLRV-LDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           P  L  L  L + L+L  N+L  E+P     L  L  L + +N++      +  L NL  
Sbjct: 599 PPELGKLPFLEISLNLSCNRLSGEIPSQFAGLDKLGCLDVSYNQLSGSLEPLARLENLVT 658

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHL 251
           L++  N      P+    + L   D+A NHL
Sbjct: 659 LNISYNAFSGELPDTAFFQKLPINDIAGNHL 689


>gi|421124102|ref|ZP_15584372.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421135003|ref|ZP_15595133.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410020886|gb|EKO87681.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410438589|gb|EKP87675.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 399

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 129/379 (34%), Positives = 209/379 (55%), Gaps = 11/379 (2%)

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N LT +P  +  L+ L +L L++N+++ LP  + K  +L+ L LR NR+ T+  +I  L 
Sbjct: 4   NKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELK 63

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
            L  L++ +N+I+ LP E+G L+NL   +L+ N L  +PKEIGN   L  L L++N+L  
Sbjct: 64  LLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKT 123

Query: 277 IPDMLGNLINLTRLRLSYNRL-----ESVPETLSKC-VHLNEFNVEGCALSSLPDGLLSS 330
           +P  +  L +L  L L  N L     + +   L  C + L +   EG    +L   L   
Sbjct: 124 LPRQMEKLQDLEVLNLLINPLLFEERKKIQALLPDCDIDLRDVE-EGETYRNLNLALEQP 182

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           L  I +++L   +F+ +P     +  ++ S++     +  +P  I  R K+L ++++  N
Sbjct: 183 L-KILSLSLEYQQFSLFPKEI-LKLKNLRSLSLYDTSLVALPKEIV-RLKHLERLSLGLN 239

Query: 391 LLTSLPLDLGTWVGLTELNLGT-NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
            L SLP ++G    L  L++G  N+   L ++I  L NL  L+L+ N  K  P  I  L+
Sbjct: 240 QLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELK 299

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
           KL  L++  N+L++LP +IG LK LQ L L  N+L +LP  IG L NL+ L +  N +++
Sbjct: 300 KLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKT 359

Query: 510 IPEEIGTLENLHTLYLNDN 528
           +PEEI  L+NL  L L +N
Sbjct: 360 LPEEIARLQNLRKLTLYEN 378



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 132/384 (34%), Positives = 200/384 (52%), Gaps = 16/384 (4%)

Query: 180 NKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELK 239
           NKL  +P  +++L +L IL L+ NRI T+  +I+   NL  L++R N++  LP E+GELK
Sbjct: 4   NKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELK 63

Query: 240 NLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLES 299
            L  L+L +N ++ LP EIG    L   +L  N+L +IP  +GNL NL  L L  N+L++
Sbjct: 64  LLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKT 123

Query: 300 VPETLSKCVHLNEFNV--------EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGG 351
           +P  + K   L   N+        E   + +L       L  +      RN   A     
Sbjct: 124 LPRQMEKLQDLEVLNLLINPLLFEERKKIQALLPDCDIDLRDVEEGETYRNLNLAL---- 179

Query: 352 PTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLG 411
             Q   + S++ E+ Q    P  I  + KNL  +++ D  L +LP ++     L  L+LG
Sbjct: 180 -EQPLKILSLSLEYQQFSLFPKEIL-KLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLG 237

Query: 412 TNQISKLSEDIQNLVNLEVL-VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
            NQ+  L ++I  L NL  L + +NN  + LP  I  L+ L+ L L +N+ +  P EI  
Sbjct: 238 LNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWE 297

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           LK+L  L + +NQL +LP  IG L  L  L +  N L ++P EIG L NL  LYL  N  
Sbjct: 298 LKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNR- 356

Query: 531 LNNIPFELALCSNLQIMSLDNCPL 554
           +  +P E+A   NL+ ++L   P+
Sbjct: 357 IKTLPEEIARLQNLRKLTLYENPI 380



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 191/380 (50%), Gaps = 34/380 (8%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN+  L L  + I+ LP  +EK  +L+EL L GN+L +LP +IG +  L  L L  N + 
Sbjct: 17  ENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIK 76

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP+ +  L+ L + +L  NKL  +P  +  L +L++LYL  N++KT+   ++ L +L +
Sbjct: 77  ILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 136

Query: 221 LSMRDN--------KIRELPP---------ELGE-LKNL----------VTLDLAHNHLE 252
           L++  N        KI+ L P         E GE  +NL          ++L L +    
Sbjct: 137 LNLLINPLLFEERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFS 196

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
             PKEI     L +L L    LV +P  +  L +L RL L  N+L+S+P+ +    +L  
Sbjct: 197 LFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRS 256

Query: 313 FNVEG-CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
            ++        LP   ++ L ++ ++ L++N+F  +P     +   +  +N   NQ+D +
Sbjct: 257 LDIGANNEFEVLPKE-IARLQNLRSLLLNQNRFKIFPKEI-WELKKLVILNVNTNQLDAL 314

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
           P  I  R K L  +++  N LT+LP ++G    LTEL L  N+I  L E+I  L NL  L
Sbjct: 315 PEKI-GRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKL 373

Query: 432 VLSNNLLKKLPSSIGNLRKL 451
            L  N +   P  +  +RKL
Sbjct: 374 TLYENPIP--PQELDKIRKL 391



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 145/318 (45%), Gaps = 54/318 (16%)

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           N+L  +P  +  L NLT LRL  NR+ ++P+ + K  +L E N+ G              
Sbjct: 4   NKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRG-------------- 49

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
                     N+    P G   +   +  +N E+N+I  +P  I +  +NL   N+  N 
Sbjct: 50  ----------NRLVTLP-GEIGELKLLEELNLENNRIKILPNEIGA-LENLWIFNLSGNK 97

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL-VLSNNLL----KK----LP 442
           L S+P ++G    L  L L  NQ+  L   ++ L +LEVL +L N LL    KK    LP
Sbjct: 98  LASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLFEERKKIQALLP 157

Query: 443 SSIGNLR-------------------KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
               +LR                   K+  L LE  +    P EI  LK L+ L L    
Sbjct: 158 DCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFSLFPKEILKLKNLRSLSLYDTS 217

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
           LV+LP+ I  L +L  LS+G N L+S+P+EIG L NL +L +  N     +P E+A   N
Sbjct: 218 LVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQN 277

Query: 544 LQIMSLDNCPLSQIPSEI 561
           L+ + L+       P EI
Sbjct: 278 LRSLLLNQNRFKIFPKEI 295



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/151 (39%), Positives = 88/151 (58%), Gaps = 4/151 (2%)

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           M  N LT +P ++     LT L L  N+IS L ++I+   NL+ L L  N L  LP  IG
Sbjct: 1   MNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIG 60

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            L+ L+ L+LE N+++ LPNEIG L+ L    L  N+L S+P+ IG+L NL  L +  N 
Sbjct: 61  ELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQ 120

Query: 507 LQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           L+++P ++  L++L  L    N  +N + FE
Sbjct: 121 LKTLPRQMEKLQDLEVL----NLLINPLLFE 147


>gi|392396972|ref|YP_006433573.1| Leucine Rich Repeat (LRR)-containing protein [Flexibacter litoralis
           DSM 6794]
 gi|390528050|gb|AFM03780.1| Leucine Rich Repeat (LRR)-containing protein [Flexibacter litoralis
           DSM 6794]
          Length = 439

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 184/361 (50%), Gaps = 6/361 (1%)

Query: 104 LNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLP 163
           + LD  KSS    P + +    + EL  Y N+L  +P +I  + +L  L    N +  LP
Sbjct: 63  IKLDTIKSSTIKSPQNAK--FRVVELKFYRNELKIVPVEIAQLIHLKKLSFPHNWIDDLP 120

Query: 164 DSLANLQQLRVLDLRHN-KLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
             LANL +L  L++ +N  L   P V+ KL +LK+L    + I  +  +I+ L  L  L 
Sbjct: 121 AELANLDKLEELEIDNNYGLKHFPDVITKLKNLKVLKFTDSFITKIPKEIENLKMLRELD 180

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N+I +LP  L +L  L +L L HN    LPK+I   T L  L+L  NEL  IP  +G
Sbjct: 181 LSQNRIEKLPKNLSKLNRLESLILNHNEFTSLPKQIATLTSLKELNLSMNELEVIPSFIG 240

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
           N   +  L +S  RL  +P+TLS  + L E ++    L   P  ++  LT +  + +S N
Sbjct: 241 NYREMRVLSISATRLIEIPDTLSNLLKLEELDIGFNHLREFPISII-KLTKLKKLDISAN 299

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
           + +  PS   +   +V  +N   N++   P  I S  K L K+++  N ++ +P  +   
Sbjct: 300 RISNIPSQI-SALKNVEELNVNSNKLYNFPEEITSLTK-LKKLDLSFNTISQIPFSIKKL 357

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLE 462
            GL  L++  NQ S   ++I +L  LEVL LS+N ++ +P SI  L  L+ L+  +N L 
Sbjct: 358 KGLESLDIAVNQFSSFPKEILSLTKLEVLYLSSNSIQTIPLSIEKLTNLEELNCRQNPLS 417

Query: 463 S 463
           +
Sbjct: 418 A 418



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 173/336 (51%), Gaps = 5/336 (1%)

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE-LVNIPD 279
           L    N+++ +P E+ +L +L  L   HN +++LP E+ N   L  L++ +N  L + PD
Sbjct: 86  LKFYRNELKIVPVEIAQLIHLKKLSFPHNWIDDLPAELANLDKLEELEIDNNYGLKHFPD 145

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
           ++  L NL  L+ + + +  +P+ +     L E ++    +  LP  L S L  + ++ L
Sbjct: 146 VITKLKNLKVLKFTDSFITKIPKEIENLKMLRELDLSQNRIEKLPKNL-SKLNRLESLIL 204

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           + N+FT+ P    T  TS+  +N   N+++ IP  I    + +  +++    L  +P  L
Sbjct: 205 NHNEFTSLPKQIAT-LTSLKELNLSMNELEVIPSFI-GNYREMRVLSISATRLIEIPDTL 262

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
              + L EL++G N + +    I  L  L+ L +S N +  +PS I  L+ ++ L++  N
Sbjct: 263 SNLLKLEELDIGFNHLREFPISIIKLTKLKKLDISANRISNIPSQISALKNVEELNVNSN 322

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           KL + P EI  L +L++L L  N +  +P +I  L  L  L +  N   S P+EI +L  
Sbjct: 323 KLYNFPEEITSLTKLKKLDLSFNTISQIPFSIKKLKGLESLDIAVNQFSSFPKEILSLTK 382

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           L  LYL+ N+ +  IP  +   +NL+ ++    PLS
Sbjct: 383 LEVLYLSSNS-IQTIPLSIEKLTNLEELNCRQNPLS 417



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 166/333 (49%), Gaps = 8/333 (2%)

Query: 195 LKILYLRF--NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH-L 251
            +++ L+F  N +K V  +I  L +L  LS   N I +LP EL  L  L  L++ +N+ L
Sbjct: 81  FRVVELKFYRNELKIVPVEIAQLIHLKKLSFPHNWIDDLPAELANLDKLEELEIDNNYGL 140

Query: 252 EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN 311
           +  P  I     L  L    + +  IP  + NL  L  L LS NR+E +P+ LSK   L 
Sbjct: 141 KHFPDVITKLKNLKVLKFTDSFITKIPKEIENLKMLRELDLSQNRIEKLPKNLSKLNRLE 200

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG-GPTQFTSVYSINFEHNQIDK 370
              +     +SLP  + ++LTS+  + LS N+    PS  G  +   V SI+    ++ +
Sbjct: 201 SLILNHNEFTSLPKQI-ATLTSLKELNLSMNELEVIPSFIGNYREMRVLSIS--ATRLIE 257

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           IP    S    L ++++  N L   P+ +     L +L++  N+IS +   I  L N+E 
Sbjct: 258 IP-DTLSNLLKLEELDIGFNHLREFPISIIKLTKLKKLDISANRISNIPSQISALKNVEE 316

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA 490
           L +++N L   P  I +L KLK LDL  N +  +P  I  LK L+ L +  NQ  S P+ 
Sbjct: 317 LNVNSNKLYNFPEEITSLTKLKKLDLSFNTISQIPFSIKKLKGLESLDIAVNQFSSFPKE 376

Query: 491 IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTL 523
           I  LT L  L +  N++Q+IP  I  L NL  L
Sbjct: 377 ILSLTKLEVLYLSSNSIQTIPLSIEKLTNLEEL 409



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 157/310 (50%), Gaps = 25/310 (8%)

Query: 264 LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG-CALSS 322
           +V L    NEL  +P  +  LI+L +L   +N ++ +P  L+    L E  ++    L  
Sbjct: 83  VVELKFYRNELKIVPVEIAQLIHLKKLSFPHNWIDDLPAELANLDKLEELEIDNNYGLKH 142

Query: 323 LPDGLLSSLTSINNITLSRNKFT-AYPSGGPTQFTSV---YSINFEHNQIDKIPYGIFSR 378
            PD     +T + N+ +   KFT ++ +  P +  ++     ++   N+I+K+P      
Sbjct: 143 FPD----VITKLKNLKVL--KFTDSFITKIPKEIENLKMLRELDLSQNRIEKLP------ 190

Query: 379 AKNLSKVNMKDNLL------TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV 432
            KNLSK+N  ++L+      TSLP  + T   L ELNL  N++  +   I N   + VL 
Sbjct: 191 -KNLSKLNRLESLILNHNEFTSLPKQIATLTSLKELNLSMNELEVIPSFIGNYREMRVLS 249

Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
           +S   L ++P ++ NL KL+ LD+  N L   P  I  L +L++L + +N++ ++P  I 
Sbjct: 250 ISATRLIEIPDTLSNLLKLEELDIGFNHLREFPISIIKLTKLKKLDISANRISNIPSQIS 309

Query: 493 HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
            L N+  L+V  N L + PEEI +L  L  L L+ NT ++ IPF +     L+ + +   
Sbjct: 310 ALKNVEELNVNSNKLYNFPEEITSLTKLKKLDLSFNT-ISQIPFSIKKLKGLESLDIAVN 368

Query: 553 PLSQIPSEIV 562
             S  P EI+
Sbjct: 369 QFSSFPKEIL 378



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 122/251 (48%), Gaps = 1/251 (0%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
            K +N+  L  + S IT +P  +E L  L EL L  N++  LP  +  +  L  L L  N
Sbjct: 148 TKLKNLKVLKFTDSFITKIPKEIENLKMLRELDLSQNRIEKLPKNLSKLNRLESLILNHN 207

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
             TSLP  +A L  L+ L+L  N+L  +P  +     +++L +   R+  +   +  L  
Sbjct: 208 EFTSLPKQIATLTSLKELNLSMNELEVIPSFIGNYREMRVLSISATRLIEIPDTLSNLLK 267

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N +RE P  + +L  L  LD++ N +  +P +I     +  L++  N+L N 
Sbjct: 268 LEELDIGFNHLREFPISIIKLTKLKKLDISANRISNIPSQISALKNVEELNVNSNKLYNF 327

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P+ + +L  L +L LS+N +  +P ++ K   L   ++     SS P  +L SLT +  +
Sbjct: 328 PEEITSLTKLKKLDLSFNTISQIPFSIKKLKGLESLDIAVNQFSSFPKEIL-SLTKLEVL 386

Query: 338 TLSRNKFTAYP 348
            LS N     P
Sbjct: 387 YLSSNSIQTIP 397


>gi|334326414|ref|XP_003340753.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog
           [Monodelphis domestica]
          Length = 1651

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 203/417 (48%), Gaps = 29/417 (6%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++ ++D    S+  +P  + + +  LEEL L  N+L  LP     + NL  LG
Sbjct: 7   LWRCNR-HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N + E+P  +    +L+I     N +  +     
Sbjct: 66  LSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFT 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L +L+ L++ D  ++ LP ++G L NLVTL+L  N L+ LP  +     L  LDL  N+
Sbjct: 126 QLRSLAHLALNDVSLQVLPGDVGNLANLVTLELRENLLKSLPTSLSFLVKLEQLDLGGND 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L  +PD LG L NL  L L  N+L ++P  L     L   +V    L  LP   +S LT 
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENKLEQLP-AEVSGLTL 244

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ LS+N     P  G  Q   +  +  + N++ ++   I    +NLS++ + +N+LT
Sbjct: 245 LTDLLLSQNLLERLPD-GIGQLKQLSILKVDQNRLCEVTETI-GECENLSELILTENMLT 302

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP  LG    LT LN+  N+                       L  LP+ +G    L  
Sbjct: 303 ALPRSLGKLTKLTNLNVDRNR-----------------------LGTLPAEVGGCTSLNV 339

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L L +N+L SLP E+    EL  L +  N+L SLP A+ HL NL  L + EN  Q +
Sbjct: 340 LSLRDNRLASLPPELAGTTELHVLDVAGNRLQSLPFALTHL-NLKALWLAENQAQPM 395



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 174/410 (42%), Gaps = 93/410 (22%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           +D RH  L  +P  +Y+                      Y  +L  L +  N++RELP  
Sbjct: 17  VDKRHCSLQAVPEEIYR----------------------YSRSLEELLLDANQLRELPKP 54

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
              L NL  L L+ N ++ LP E+ N   LV LD+  N   +IP+               
Sbjct: 55  FFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRN---DIPE--------------- 96

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
                +PE++  C  L   +  G  LS LPDG                          TQ
Sbjct: 97  -----IPESIKFCKALEIADFSGNPLSRLPDGF-------------------------TQ 126

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
             S+  +      +  +P G      NL  + +++NLL SLP  L   V L +L+LG N 
Sbjct: 127 LRSLAHLALNDVSLQVLP-GDVGNLANLVTLELRENLLKSLPTSLSFLVKLEQLDLGGND 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +  L + +  L NL  L L  N L  LP  +GNLR+L CLD+ ENKLE LP E+  L  L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENKLEQLPAEVSGLTLL 245

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC---- 530
             L+L  N L  LP  IG L  LS L V +N L  + E IG  ENL  L L +N      
Sbjct: 246 TDLLLSQNLLERLPDGIGQLKQLSILKVDQNRLCEVTETIGECENLSELILTENMLTALP 305

Query: 531 ------------------LNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
                             L  +P E+  C++L ++SL +  L+ +P E+ 
Sbjct: 306 RSLGKLTKLTNLNVDRNRLGTLPAEVGGCTSLNVLSLRDNRLASLPPELA 355



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 116/348 (33%), Positives = 177/348 (50%), Gaps = 15/348 (4%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
            ++ LD+S++ I  +P S++    LE     GN L+ LP     + +L  L L + SL  
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQV 142

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + NL  L  L+LR N L  LP  +  L  L+ L L  N ++ +   +  L NL  L
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  LPPELG L+ LV LD++ N LE+LP E+   T+L  L L  N L  +PD +
Sbjct: 203 WLDRNQLSTLPPELGNLRRLVCLDVSENKLEQLPAEVSGLTLLTDLLLSQNLLERLPDGI 262

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  L+ L++  NRL  V ET+ +C +L+E  +    L++LP   L  LT + N+ + R
Sbjct: 263 GQLKQLSILKVDQNRLCEVTETIGECENLSELILTENMLTALPRS-LGKLTKLTNLNVDR 321

Query: 342 NKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           N+    P+  GG    TS+  ++   N++  +P  +      L  +++  N L SLP  L
Sbjct: 322 NRLGTLPAEVGG---CTSLNVLSLRDNRLASLPPELAG-TTELHVLDVAGNRLQSLPFAL 377

Query: 400 GTWVGLTELNLGTNQISKL----SEDIQNLVNLEVLVLSNNLLKKLPS 443
            T + L  L L  NQ   +    +ED Q        VL+  LL + PS
Sbjct: 378 -THLNLKALWLAENQAQPMLKFQTEDDQKTGE---KVLTCYLLPQQPS 421


>gi|327274772|ref|XP_003222150.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387-like [Anolis carolinensis]
          Length = 871

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 144/481 (29%), Positives = 230/481 (47%), Gaps = 31/481 (6%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C   NI  L+LS++ I  LP  +E+L  L+EL L  N+L  LP Q+  +  L  + L  N
Sbjct: 312 CYLPNISKLNLSENLIQSLPKEIEELKTLKELSLSNNRLIFLPIQLFQLIQLEKMRLDCN 371

Query: 158 SLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSN 217
            L SL D + NLQ+L+ L+L  N    +   + K T L+ L L  N+ K +  ++  L  
Sbjct: 372 QLESLSDKVENLQKLQDLNLSKNLFQNITDNISKCTMLERLNLSDNQFKKLPNNLYQLKY 431

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L +  N++  L   +   K L  L+++ N L  +P EI NCT ++ +DL  N+L   
Sbjct: 432 LKELHLNRNQLILLDEHIAFNKELSVLEVSENALMYIPVEIKNCTEIIKIDLSCNKLALF 491

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  L  L+ L  L LS N +  +   +S   +L   N+    L S          SI+  
Sbjct: 492 PMGLCALVALRHLNLSGNYISEITTEISFIKYLQYLNLSKNKLPSF---------SIHLC 542

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPL 397
           TLSR  +                ++  +NQI  IP  +  + K+L  + +  +     P 
Sbjct: 543 TLSRLNY----------------LDLSYNQISSIPTNV-QKMKSLRTLLLHHSKFILFPR 585

Query: 398 DLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
           +L     L  L+L  N+I  +  DI++L  L+ L LSNN     P  I  +  L+ L + 
Sbjct: 586 ELCALNQLKVLDLSENKIQFIPSDIKDLEELKELNLSNNNFASFPVEICQILSLQKLTIC 645

Query: 458 EN---KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           +    KL+SLP EI  L  L+ L +  N+L  +P++IG +  L  L    N  + +P   
Sbjct: 646 QKNGLKLKSLPEEISKLLVLKELDISYNELQEMPKSIGEIKTLVTLIANNNFFKKLPSSF 705

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSL-IIRYL 573
            +L NL  L L +N  +  +P ++ L   L+ ++ D  PL + P+E+  G   + II Y+
Sbjct: 706 SSLRNLQHLNLKENE-IQRLPSDMHLLVGLRDINFDGNPLIRPPTEVCKGKQLIPIIHYI 764

Query: 574 K 574
           +
Sbjct: 765 R 765



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 188/393 (47%), Gaps = 38/393 (9%)

Query: 184 ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVT 243
           E+P  V  +  L  LYL  N IK +  +I+ L+ L +LS+  N++  LPPE+G L+NL T
Sbjct: 169 EIPTGVLDMKMLNYLYLNNNEIKIIPKEIRQLTGLEILSIERNRLTSLPPEIGLLQNLRT 228

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L+L HN L  LP E    + L  L   HN +   P  L  L +L  L LS N++  +   
Sbjct: 229 LNLRHNQLTGLPDEFSQLSELKYLLFSHNNIEKFPSALTTLRSLEVLDLSGNKVTLIEN- 287

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
                                   L+ +  +N + L+ NK   +P        ++  +N 
Sbjct: 288 ------------------------LTEMKKLNILYLNENKMKIFPKAL-CYLPNISKLNL 322

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
             N I  +P  I    K L ++++ +N L  LP+ L   + L ++ L  NQ+  LS+ ++
Sbjct: 323 SENLIQSLPKEI-EELKTLKELSLSNNRLIFLPIQLFQLIQLEKMRLDCNQLESLSDKVE 381

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           NL  L+ L LS NL + +  +I     L+ L+L +N+ + LPN +  LK L+ L L  NQ
Sbjct: 382 NLQKLQDLNLSKNLFQNITDNISKCTMLERLNLSDNQFKKLPNNLYQLKYLKELHLNRNQ 441

Query: 484 LVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS- 542
           L+ L   I     LS L V EN L  IP EI   +N   +   D +C     F + LC+ 
Sbjct: 442 LILLDEHIAFNKELSVLEVSENALMYIPVEI---KNCTEIIKIDLSCNKLALFPMGLCAL 498

Query: 543 -NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
             L+ ++L    +S+I +EI        I+YL+
Sbjct: 499 VALRHLNLSGNYISEITTEIS------FIKYLQ 525


>gi|224048615|ref|XP_002195329.1| PREDICTED: leucine-rich repeat-containing protein 1 [Taeniopygia
           guttata]
          Length = 524

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/355 (32%), Positives = 179/355 (50%), Gaps = 4/355 (1%)

Query: 175 LDLRHNKLNELPMVVYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           +D RH  L  +P  +Y+ + SL+ L L  N+++ +      L  L  L + DN+I+ LPP
Sbjct: 17  IDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPFFQLVKLRKLGLSDNEIQRLPP 76

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+     LV LDL+ N + E+P+ I  C  L   D   N L  +P+    L NLT L ++
Sbjct: 77  EIANFMQLVELDLSRNDIPEIPESISFCRALQIADFSGNPLTRLPESFPELQNLTCLSVN 136

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
              L+++PE +    +L    +    L+ LP+ L + L  +  + L  N+    P     
Sbjct: 137 DISLQALPENIGNLYNLASLELRENLLTYLPESL-AQLQRLEELDLGNNELYHLPETIGA 195

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
            F ++  +  + NQ+ +IP  +    KNL  +++ +N L  LP ++     LT+L +  N
Sbjct: 196 LF-NLKDLWLDGNQLAEIPQEV-GNLKNLLCLDVSENKLECLPEEISGLTSLTDLLVSQN 253

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
            +  L + I  L  L +L +  N L +L  SIG+   L  L L EN+L+SLP  IG LK+
Sbjct: 254 LLQVLPDGIGKLRRLSILKVDQNKLIQLTDSIGDCESLTELVLTENQLQSLPKSIGKLKK 313

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L  L    N+L SLP+ +G   +L+  SV +N L  IP EI     LH L +  N
Sbjct: 314 LNNLNADRNKLTSLPKEVGGCCSLNVFSVRDNRLSRIPSEISQATELHVLDVAGN 368



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 120/350 (34%), Positives = 168/350 (48%), Gaps = 58/350 (16%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L ELPK       L  L L  NE+  +P  + N + L  L LS N + 
Sbjct: 36  RSLEELLLDANQLRELPKPFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIP 95

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQ 354
            +PE++S C  L   +  G  L+ LP+    L +LT  S+N+I+L            P  
Sbjct: 96  EIPESISFCRALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQ---------ALPEN 146

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
             ++Y                     NL+ + +++NLLT LP  L     L EL+LG N+
Sbjct: 147 IGNLY---------------------NLASLELRENLLTYLPESLAQLQRLEELDLGNNE 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +  L E I  L NL+ L L  N L ++P  +GNL+ L CLD+ ENKLE LP EI  L  L
Sbjct: 186 LYHLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEISGLTSL 245

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVG-----------------------ENNLQSIP 511
             L++  N L  LP  IG L  LS L V                        EN LQS+P
Sbjct: 246 TDLLVSQNLLQVLPDGIGKLRRLSILKVDQNKLIQLTDSIGDCESLTELVLTENQLQSLP 305

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           + IG L+ L+ L  + N  L ++P E+  C +L + S+ +  LS+IPSEI
Sbjct: 306 KSIGKLKKLNNLNADRNK-LTSLPKEVGGCCSLNVFSVRDNRLSRIPSEI 354



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 128/372 (34%), Positives = 192/372 (51%), Gaps = 17/372 (4%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LDLS++ I  +P S+     L+     GN L  LP     + NLTCL + + SL +L
Sbjct: 84  LVELDLSRNDIPEIPESISFCRALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQAL 143

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N +  +   I  L NL  L 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLW 203

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ E+P E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  +PD +G
Sbjct: 204 LDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLPDGIG 263

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  N+L  + +++  C  L E  +    L SLP   +  L  +NN+   RN
Sbjct: 264 KLRRLSILKVDQNKLIQLTDSIGDCESLTELVLTENQLQSLPKS-IGKLKKLNNLNADRN 322

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K T+ P   GG     +V+S+    N++ +IP  I S+A  L  +++  N LT LP+ L 
Sbjct: 323 KLTSLPKEVGGCCSL-NVFSV--RDNRLSRIPSEI-SQATELHVLDVAGNRLTYLPISLT 378

Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEV--LVLSNNLLKKLPSSIGNLRKL-KCLDLE 457
           T + L  L L  NQ   L    Q   + E    +L+  LL ++PS  G    L +C    
Sbjct: 379 T-LRLKALWLSDNQSQPLL-TFQTDTDPETGEKILTCVLLPQMPSESGCQDNLPRC---- 432

Query: 458 ENKLESLPNEIG 469
              LESL NE+ 
Sbjct: 433 -GALESLVNEMS 443



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 190/394 (48%), Gaps = 29/394 (7%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++ ++D    S+  +P  + + +  LEEL L  N+L  LP     +  L  LG
Sbjct: 7   LWRCNR-HVESIDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPFFQLVKLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFN---RIKTVHP 210
           L++N +  LP  +AN  QL  LDL  N + E+P  +    +L+I     N   R+    P
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQIADFSGNPLTRLPESFP 125

Query: 211 DIQYLS--------------------NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
           ++Q L+                    NL+ L +R+N +  LP  L +L+ L  LDL +N 
Sbjct: 126 ELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNE 185

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
           L  LP+ IG    L  L L  N+L  IP  +GNL NL  L +S N+LE +PE +S    L
Sbjct: 186 LYHLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEISGLTSL 245

Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK 370
            +  V    L  LPDG +  L  ++ + + +NK     +       S+  +    NQ+  
Sbjct: 246 TDLLVSQNLLQVLPDG-IGKLRRLSILKVDQNKLIQL-TDSIGDCESLTELVLTENQLQS 303

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           +P  I  + K L+ +N   N LTSLP ++G    L   ++  N++S++  +I     L V
Sbjct: 304 LPKSI-GKLKKLNNLNADRNKLTSLPKEVGGCCSLNVFSVRDNRLSRIPSEISQATELHV 362

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           L ++ N L  LP S+  LR LK L L +N+ + L
Sbjct: 363 LDVAGNRLTYLPISLTTLR-LKALWLSDNQSQPL 395


>gi|122937315|ref|NP_001073929.1| leucine-rich repeat and IQ domain-containing protein 4 [Homo
           sapiens]
 gi|187661973|sp|A6NIV6.2|LRIQ4_HUMAN RecName: Full=Leucine-rich repeat and IQ domain-containing protein
           4; AltName: Full=Leucine-rich repeat-containing protein
           64
          Length = 560

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 217/460 (47%), Gaps = 54/460 (11%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +D S  S+T +P  +   T LEE++L  N++  +P +I  + N+  L L +N+L SL  +
Sbjct: 30  IDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPA 89

Query: 166 ------------------------LANLQQLRVLDLRHNKLNELPMVVYK---------- 191
                                   ++ L  LR L L    L E+P+V++K          
Sbjct: 90  LGLLSSLESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVIFKNLHHLELLGL 149

Query: 192 --------------LTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
                          T L+ +YL+ N+ +    ++  L  L ++ + +NKI  +P E+G 
Sbjct: 150 TGNHLKCLPKEIVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPEEIGH 209

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L  L    +A N+L  LP  +  C+ L  LDL HN L +IP     L  +T + LS NRL
Sbjct: 210 LTGLQKFYMASNNLPVLPASLCQCSQLSVLDLSHNLLHSIPKSFAELRKMTEIGLSGNRL 269

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
           E VP  + +   L+   +    L  L  G    L ++  + LS+N     P        +
Sbjct: 270 EKVPRLICRWTSLHLLYLGNTGLHRL-RGSFRCLVNLRFLDLSQNHLHHCPL-QICALKN 327

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +  +  + N+I ++P  + S +K L  + +  N   S P ++ +   L +L +G +Q  K
Sbjct: 328 LEVLGLDDNKIGQLPSELGSLSK-LKILGLTGNEFLSFPEEVLSLASLEKLYIGQDQGFK 386

Query: 418 LS---EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           L+   E I+ L +L+ L + NN L+ LP S+G++  L+ LD   N L+ LP+ I   + L
Sbjct: 387 LTYVPEHIRKLQSLKELYIENNHLEYLPVSLGSMPNLEVLDCRHNLLKQLPDAICQAQAL 446

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           + L L+ N L  LP  +  L NL  L++ +N ++  P+E+
Sbjct: 447 KELRLEDNLLTHLPENLDSLVNLKVLTLMDNPMEEPPKEV 486



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 188/410 (45%), Gaps = 49/410 (11%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
            +D  +  L  +P+ ++  T L+ ++L  N+I+ +  +IQ L N+ +L +  N +R L P
Sbjct: 29  FIDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCP 88

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
            LG L +L +LDL++N +          + LV +   H               L  LRL 
Sbjct: 89  ALGLLSSLESLDLSYNPIFS--------SSLVVVSFLHA--------------LRELRLY 126

Query: 294 YNRLESVPETLSKCVH-LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
              L+ +P  + K +H L    + G  L  LP  +++  T +  I L RN+F  +P    
Sbjct: 127 QTDLKEIPVVIFKNLHHLELLGLTGNHLKCLPKEIVNQ-TKLREIYLKRNQFEVFPQELC 185

Query: 353 TQFTSVYSINFEHNQIDKIPYGI--------FSRAKN--------------LSKVNMKDN 390
             +T +  I+ + N+I  IP  I        F  A N              LS +++  N
Sbjct: 186 VLYT-LEIIDLDENKIGAIPEEIGHLTGLQKFYMASNNLPVLPASLCQCSQLSVLDLSHN 244

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRK 450
           LL S+P        +TE+ L  N++ K+   I    +L +L L N  L +L  S   L  
Sbjct: 245 LLHSIPKSFAELRKMTEIGLSGNRLEKVPRLICRWTSLHLLYLGNTGLHRLRGSFRCLVN 304

Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           L+ LDL +N L   P +I  LK L+ L L  N++  LP  +G L+ L  L +  N   S 
Sbjct: 305 LRFLDLSQNHLHHCPLQICALKNLEVLGLDDNKIGQLPSELGSLSKLKILGLTGNEFLSF 364

Query: 511 PEEIGTLENLHTLYLNDNTC--LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           PEE+ +L +L  LY+  +    L  +P  +    +L+ + ++N  L  +P
Sbjct: 365 PEEVLSLASLEKLYIGQDQGFKLTYVPEHIRKLQSLKELYIENNHLEYLP 414



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 111/258 (43%), Gaps = 64/258 (24%)

Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS-NNL------ 437
           ++  +  LT++PL++ T+  L E++L  NQI ++ ++IQ L N+ VL L  NNL      
Sbjct: 30  IDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPA 89

Query: 438 ----------------------------------------LKKLPSSI-GNLRKLKCLDL 456
                                                   LK++P  I  NL  L+ L L
Sbjct: 90  LGLLSSLESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVIFKNLHHLELLGL 149

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
             N L+ LP EI    +L+ + L+ NQ    P+ +  L  L  + + EN + +IPEEIG 
Sbjct: 150 TGNHLKCLPKEIVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPEEIGH 209

Query: 517 LENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP---------SEIVVGG-- 565
           L  L   Y+  N  L  +P  L  CS L ++ L +  L  IP         +EI + G  
Sbjct: 210 LTGLQKFYMASNN-LPVLPASLCQCSQLSVLDLSHNLLHSIPKSFAELRKMTEIGLSGNR 268

Query: 566 ----PSLIIRYLKMQGPY 579
               P LI R+  +   Y
Sbjct: 269 LEKVPRLICRWTSLHLLY 286


>gi|359493861|ref|XP_003634682.1| PREDICTED: leucine-rich repeat-containing protein 40-like isoform 2
           [Vitis vinifera]
 gi|302143032|emb|CBI20327.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 155/504 (30%), Positives = 241/504 (47%), Gaps = 46/504 (9%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +LDLS++SI  +P  +   T L +L    NKL  LP+ +G  +NL  L  + N +TSLP+
Sbjct: 95  SLDLSQNSIVDIPEVIGSATSLVKLDCSNNKLKDLPNSLGRCSNLLELKASNNCITSLPE 154

Query: 165 SLANLQQLRVLDLRHNKLN------------------------ELPMVVYKLTSLKILYL 200
            LA+  +L  LD+  NKL                          LP  + +L+ L  L  
Sbjct: 155 DLAHCLKLIKLDVEGNKLTMLSENMIASWVLLTELNASRNLLTGLPENIGRLSRLIRLDF 214

Query: 201 RFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
             NRI ++   I+   +L+   M +N +  L  E+G L  L TLDL  N L+E P E   
Sbjct: 215 HQNRISSIPASIKGCCSLAEFYMGNNVLSSLTAEIGALSLLGTLDLHSNQLKEYPVEA-- 272

Query: 261 CTM-LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA 319
           C + L  LDL +N L  +P  +G +  L +L L+ N L ++  +L               
Sbjct: 273 CKLRLQVLDLSNNSLSGLPPEIGMMTTLRKLVLTGNPLRTLRSSLVSGPTPALLKFLRSR 332

Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           LS+  D   ++    N +T++               TS   ++ E   +  +P  ++  +
Sbjct: 333 LSTDEDSEAATTAKENVVTMAAR----------ISITS-KELSLEGMGLSAVPAQVWESS 381

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI-QNLVNLEVLVLSNNLL 438
           + + KV++  N +  LP +L + V L  L L  N+I +    I ++L NL  L L NN L
Sbjct: 382 E-IVKVDLSRNSIQELPPELTSCVSLQALILSRNKIQEWPGVILKSLPNLSCLKLDNNPL 440

Query: 439 KKLPS-SIGNLRKLKCLDLEENKLESLPNEIGF--LKELQRLILQSNQLVSLPRAIGHLT 495
           +++P+     + KL+ LDL  N   SLP+   F  L +LQ L L+  QL  +P  I  L 
Sbjct: 441 RQIPADGFQAVSKLQILDLSGNS-ASLPDNPAFSSLPQLQELYLRRMQLCEVPSDILSLQ 499

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS-NLQIMSLDNCPL 554
            L  L + +N+LQ IPE    L +L  L L+DN+ +  +P EL L   +LQ + LD  PL
Sbjct: 500 QLQILDLSQNSLQLIPEGFKNLTSLTELNLSDNS-IATLPPELGLLEPSLQALRLDGNPL 558

Query: 555 SQIPSEIVVGGPSLIIRYLKMQGP 578
             I   I+  G   +++YLK + P
Sbjct: 559 RSIRRTILDRGTKAVLKYLKDKIP 582



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 214/436 (49%), Gaps = 53/436 (12%)

Query: 175 LDLRHNKLNELPMVVYK-------------LTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L+L +  L E+P  VY+                L+ L L  N I+++  D++ LS LS+L
Sbjct: 14  LNLSNRALREVPDEVYRSLDAIGEGEKWWEAVELQKLILAHNDIESLREDLKNLSLLSVL 73

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++ +NK+  LP  +GEL  L +LDL+ N + ++P+ IG+ T LV LD  +N+L ++P+ L
Sbjct: 74  NLSNNKLVHLPAAIGELPMLKSLDLSQNSIVDIPEVIGSATSLVKLDCSNNKLKDLPNSL 133

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G   NL  L+ S N + S+PE L+ C+ L + +VEG  L+ L + +++S   +  +  SR
Sbjct: 134 GRCSNLLELKASNNCITSLPEDLAHCLKLIKLDVEGNKLTMLSENMIASWVLLTELNASR 193

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N  T  P     + + +  ++F  N+I  IP  I     +L++  M +N+L+SL  ++G 
Sbjct: 194 NLLTGLPE-NIGRLSRLIRLDFHQNRISSIPASIKG-CCSLAEFYMGNNVLSSLTAEIGA 251

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L  L+L +NQ+ +   +   L  L+VL LSNN L  LP  IG +  L+ L L  N L
Sbjct: 252 LSLLGTLDLHSNQLKEYPVEACKL-RLQVLDLSNNSLSGLPPEIGMMTTLRKLVLTGNPL 310

Query: 462 ESL---------PNEIGFLKEL----------------------------QRLILQSNQL 484
            +L         P  + FL+                              + L L+   L
Sbjct: 311 RTLRSSLVSGPTPALLKFLRSRLSTDEDSEAATTAKENVVTMAARISITSKELSLEGMGL 370

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
            ++P  +   + +  + +  N++Q +P E+ +  +L  L L+ N         L    NL
Sbjct: 371 SAVPAQVWESSEIVKVDLSRNSIQELPPELTSCVSLQALILSRNKIQEWPGVILKSLPNL 430

Query: 545 QIMSLDNCPLSQIPSE 560
             + LDN PL QIP++
Sbjct: 431 SCLKLDNNPLRQIPAD 446


>gi|432116060|gb|ELK37190.1| Leucine-rich repeat-containing protein 40 [Myotis davidii]
          Length = 561

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 149/506 (29%), Positives = 249/506 (49%), Gaps = 60/506 (11%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN+  L++S + +  LP  +  L +L+ LYL  N+L S+P     + NL  L ++ N LT
Sbjct: 87  ENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTSIPEGFEQLFNLEDLDISNNCLT 146

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++P S ++L  L  L+L  N+L  LP  +  +  LK L    N ++++  ++  + +L +
Sbjct: 147 TVPASFSSLSSLVRLNLSSNQLKNLPAEISGMKRLKHLDCNSNLLESIPSELAGMESLEL 206

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE-IGNCTMLVTLDLQHNELVNIPD 279
           L +R NK+R LP E    K L  L L  N +E L  E + +   ++ LDL+ N+L ++PD
Sbjct: 207 LYLRRNKLRFLP-EFPSCKLLKELHLGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPD 265

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +  L +L RL LS N + S+P +L K +HL    +EG  + ++   +++  T    +  
Sbjct: 266 EITLLQSLERLDLSNNDISSLPYSLGK-LHLKFLALEGNPMRTIRREIINKGTQ-EVLKY 323

Query: 340 SRNKFTAYPSGGPTQFTSVYS---------------------INFEHNQIDKIPYGIFSR 378
            R+K       GP Q  SV                       +++   Q   IP  +F  
Sbjct: 324 LRSKIK---DDGPRQSDSVIETAMTLPSESRVNVHAIITLKILDYSDKQTTLIPDEVFDA 380

Query: 379 AKN--LSKVNMKDNLLTSLP---LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVL 433
            K+  ++ +N   N L  +P   ++L   V  +++NLG N++S        L++LE+ +L
Sbjct: 381 VKSNIVTSINFSKNQLCEIPKRIIELKEMV--SDVNLGFNKLS--------LISLELCML 430

Query: 434 SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGH 493
                          +KL  LDL  N L SLP E+  L  LQ + L  N+   LP  +  
Sbjct: 431 ---------------QKLSFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKILPEVLYR 475

Query: 494 LTNLSYLSVGENNLQSI-PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
           ++ L  + +  N + S+ PE++  +ENL TL L +N  L  IP EL  C NL+ + LD  
Sbjct: 476 ISTLETILISNNQVGSVNPEKLKIMENLVTLDLQNNDLLQ-IPPELGNCVNLRTLLLDGN 534

Query: 553 PLSQIPSEIVVGGPSLIIRYLKMQGP 578
           P     + I++ G + I+ YL+ + P
Sbjct: 535 PFRVPRAAILMKGTAAILEYLRDRIP 560



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 176/337 (52%), Gaps = 11/337 (3%)

Query: 250 HLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVH 309
            L+E+P+ +    + +  +   N   +  +      +LT+L +S N+L+S+ + L     
Sbjct: 6   RLQEVPQCVWRINVDIPEEANQNLSFSATERWWEQTDLTKLIISNNKLQSLTDDLRLLPA 65

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
           L   ++    L+SLP   +  L ++  + +S NK    P    T   ++  +  +HN++ 
Sbjct: 66  LTVLDIHDNQLTSLPSA-IRELENLQKLNVSHNKLKILPEEI-TNLRNLKGLYLQHNELT 123

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
            IP G F +  NL  +++ +N LT++P    +   L  LNL +NQ+  L  +I  +  L+
Sbjct: 124 SIPEG-FEQLFNLEDLDISNNCLTTVPASFSSLSSLVRLNLSSNQLKNLPAEISGMKRLK 182

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL-P 488
            L  ++NLL+ +PS +  +  L+ L L  NKL  LP E    K L+ L L  NQ+  L  
Sbjct: 183 HLDCNSNLLESIPSELAGMESLELLYLRRNKLRFLP-EFPSCKLLKELHLGENQIEMLGA 241

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMS 548
             + HL ++  L + +N L+S+P+EI  L++L  L L++N  ++++P+ L    +L+ ++
Sbjct: 242 EHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNND-ISSLPYSLGKL-HLKFLA 299

Query: 549 LDNCPLSQIPSEIVVGGPSLIIRYLKMQ----GPYRT 581
           L+  P+  I  EI+  G   +++YL+ +    GP ++
Sbjct: 300 LEGNPMRTIRREIINKGTQEVLKYLRSKIKDDGPRQS 336


>gi|410921926|ref|XP_003974434.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Takifugu
           rubripes]
          Length = 1634

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 188/401 (46%), Gaps = 40/401 (9%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  ++    +L+ LYL  N+I+ +   +     L  LSM DN +  
Sbjct: 44  ISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFSCQALKKLSMPDNDLSN 103

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P  I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 104 LPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQL 163

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    +   L    +    L ++P  +   LT +  + L  N+F+  P  
Sbjct: 164 FLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSI-HRLTQLERLDLGSNEFSDVPE- 221

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                   +  +  +L ++ + +N L S+P  LG    L  L+L
Sbjct: 222 ------------------------VLEQIHSLKELWLDNNSLQSIPGCLGKLRQLRYLDL 257

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  L  DI     LE L+LS+N+L+ LP SIG L+KL  L +++N+L SLPN IG 
Sbjct: 258 AKNRIETLDTDISGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPNTIGS 317

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG-------TLENLHTL 523
           L  L+      N+L SLP  IG+L +L   +  EN L  +P E+G         E +   
Sbjct: 318 LSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLTELPREVGLCRPITAWAEEMSLF 377

Query: 524 YLND---NTC--LNNIPFELALCSNLQIMSL-DNCPLSQIP 558
            LN    + C  L N+PF      +L  + L DN   + IP
Sbjct: 378 SLNPLCWSVCLRLKNLPFTFTKLKDLAALWLSDNQSKALIP 418



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 177/352 (50%), Gaps = 32/352 (9%)

Query: 218 LSMLSMRDNKIRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           +S+L      ++++P E+    + L  L L  N +EELPK++ +C  L  L +  N+L N
Sbjct: 44  ISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFSCQALKKLSMPDNDLSN 103

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  + +L+NL  L +S N ++  P+ +  C  L+        ++ LPDG          
Sbjct: 104 LPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGF--------- 154

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
                           TQ  ++  +      ++ +P   F R   L  + +++N L ++P
Sbjct: 155 ----------------TQLLNLTQLFLNDAFLEYLPAN-FGRLSKLRILELRENHLKTMP 197

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +     L  L+LG+N+ S + E ++ + +L+ L L NN L+ +P  +G LR+L+ LDL
Sbjct: 198 KSIHRLTQLERLDLGSNEFSDVPEVLEQIHSLKELWLDNNSLQSIPGCLGKLRQLRYLDL 257

Query: 457 EENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGT 516
            +N++E+L  +I   + L+ L+L SN L  LP +IG L  L+ L V +N L S+P  IG+
Sbjct: 258 AKNRIETLDTDISGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPNTIGS 317

Query: 517 LENLHTLYLNDNTC--LNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGP 566
           L  L      D +C  L ++P  +    +L+  + D   L+++P E+ +  P
Sbjct: 318 LSLLEEF---DCSCNELESLPPTIGYLHSLRTFAADENFLTELPREVGLCRP 366



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 181/406 (44%), Gaps = 40/406 (9%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  +      LEELYL  N++  LP Q+     L  L +
Sbjct: 37  FRGEEEVISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFSCQALKKLSM 96

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQY 214
            +N L++LP ++A+L  L+ LD+  N + E P  +     L ++    N I  +      
Sbjct: 97  PDNDLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQ 156

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L NL+ L + D  +  LP   G L  L  L+L  NHL+ +PK I   T L  LDL  NE 
Sbjct: 157 LLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEF 216

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
            ++P++L  + +L  L L  N L+S+P  L K   L   ++    + +L D  +S   ++
Sbjct: 217 SDVPEVLEQIHSLKELWLDNNSLQSIPGCLGKLRQLRYLDLAKNRIETL-DTDISGCEAL 275

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
            ++ LS N     P                    D I  G+    K L+ + + DN LTS
Sbjct: 276 EDLLLSSNMLQHLP--------------------DSI--GML---KKLTTLKVDDNQLTS 310

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP  +G+   L E +   N++  L   I  L +L       N L +LP  +G  R +   
Sbjct: 311 LPNTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLTELPREVGLCRPITAW 370

Query: 455 DLEEN-------------KLESLPNEIGFLKELQRLILQSNQLVSL 487
             E +             +L++LP     LK+L  L L  NQ  +L
Sbjct: 371 AEEMSLFSLNPLCWSVCLRLKNLPFTFTKLKDLAALWLSDNQSKAL 416


>gi|456987322|gb|EMG22649.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 305

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 165/309 (53%), Gaps = 26/309 (8%)

Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
           ML + DN++  LP E+ +LKNL  L L +N L   PKEI     L  L L +N+L  +P 
Sbjct: 1   MLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPV 60

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +G L NL  L L  N+L+++ + + +  +L +  ++   L++L   +   L ++ ++ L
Sbjct: 61  EIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEI-GKLQNLKSLFL 119

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           S N+ T +P                             + +NL ++ + +N LT+ P ++
Sbjct: 120 SNNQLTTFPKE-------------------------IGKLQNLQELYLSNNQLTTFPKEI 154

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEEN 459
           G    L  L LG NQ++ +  +I  L  L+ L L  N L  +P  IG L+ L+ L L  N
Sbjct: 155 GKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN 214

Query: 460 KLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLEN 519
           + +++P E G LK L+ L L +NQL +LP+ IG L NL  L++  N L +IP+EIG L+N
Sbjct: 215 QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQN 274

Query: 520 LHTLYLNDN 528
           L TLYL +N
Sbjct: 275 LQTLYLRNN 283



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 105/295 (35%), Positives = 159/295 (53%), Gaps = 27/295 (9%)

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           LDL  N+L+ +P  +  L NL  L L+YN+L + P+ + +                    
Sbjct: 2   LDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQ-------------------- 41

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
               L S++ + LS N+ T  P     Q  ++  +N  +NQ+  I   I  + KNL K+ 
Sbjct: 42  ----LKSLHKLYLSNNQLTILPVE-IGQLQNLQELNLWNNQLKTISKEI-EQLKNLQKLY 95

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           + +N LT+L  ++G    L  L L  NQ++   ++I  L NL+ L LSNN L   P  IG
Sbjct: 96  LDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIG 155

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            L+KL+ L L +N+L ++PNEIG L++LQ L L  NQL ++P+ IG L NL  L +  N 
Sbjct: 156 KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQ 215

Query: 507 LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
            ++IP E G L+NL  L L+ N  L  +P E+    NL++++LD   L+ IP EI
Sbjct: 216 FKTIPVEFGQLKNLKMLSLDANQ-LTALPKEIGKLKNLKMLNLDANQLTTIPKEI 269



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 161/311 (51%), Gaps = 26/311 (8%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           LDLS + +  LP  + +L +L+EL+L  N+L + P +I  + +L  L L+ N LT LP  
Sbjct: 2   LDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVE 61

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           +  LQ L+ L+L +N+L                       KT+  +I+ L NL  L + +
Sbjct: 62  IGQLQNLQELNLWNNQL-----------------------KTISKEIEQLKNLQKLYLDN 98

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N++  L  E+G+L+NL +L L++N L   PKEIG    L  L L +N+L   P  +G L 
Sbjct: 99  NQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQ 158

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            L  L L  N+L ++P  + K   L E N++   L+++P  +   L ++  + LS N+F 
Sbjct: 159 KLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEI-GQLQNLQVLFLSYNQFK 217

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P     Q  ++  ++ + NQ+  +P  I  + KNL  +N+  N LT++P ++G    L
Sbjct: 218 TIPVEF-GQLKNLKMLSLDANQLTALPKEI-GKLKNLKMLNLDANQLTTIPKEIGQLQNL 275

Query: 406 TELNLGTNQIS 416
             L L  NQ S
Sbjct: 276 QTLYLRNNQFS 286



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 164/311 (52%), Gaps = 26/311 (8%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
           +LDL  N+L  LP  + +L +L+ L+L +N++ T   +I+ L +L  L + +N++  LP 
Sbjct: 1   MLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPV 60

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
           E+G+L+NL  L+L +N L+ + KEI     L  L L +N+L  +   +G L NL  L LS
Sbjct: 61  EIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLS 120

Query: 294 YNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT 353
            N+L + P+ + K  +L E  +    L++ P  +   L  +  + L  N+ T  P     
Sbjct: 121 NNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI-GKLQKLQWLGLGDNQLTTIP----- 174

Query: 354 QFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTN 413
                       N+I K+        + L ++N+  N LT++P ++G    L  L L  N
Sbjct: 175 ------------NEIGKL--------QKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN 214

Query: 414 QISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
           Q   +  +   L NL++L L  N L  LP  IG L+ LK L+L+ N+L ++P EIG L+ 
Sbjct: 215 QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQN 274

Query: 474 LQRLILQSNQL 484
           LQ L L++NQ 
Sbjct: 275 LQTLYLRNNQF 285



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 113/176 (64%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+ +L LS + +T  P  + KL +L+ELYL  N+L + P +IG +  L  LGL +N 
Sbjct: 110 KLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQ 169

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LT++P+ +  LQ+L+ L+L  N+L  +P  + +L +L++L+L +N+ KT+  +   L NL
Sbjct: 170 LTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNL 229

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
            MLS+  N++  LP E+G+LKNL  L+L  N L  +PKEIG    L TL L++N+ 
Sbjct: 230 KMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQF 285



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 134/249 (53%), Gaps = 1/249 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L L+ + +T  P  +E+L  L +LYL  N+L  LP +IG + NL  L L  N L 
Sbjct: 20  KNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLK 79

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++   +  L+ L+ L L +N+L  L   + KL +LK L+L  N++ T   +I  L NL  
Sbjct: 80  TISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQE 139

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L + +N++   P E+G+L+ L  L L  N L  +P EIG    L  L+L  N+L  IP  
Sbjct: 140 LYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKE 199

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           +G L NL  L LSYN+ +++P    +  +L   +++   L++LP   +  L ++  + L 
Sbjct: 200 IGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE-IGKLKNLKMLNLD 258

Query: 341 RNKFTAYPS 349
            N+ T  P 
Sbjct: 259 ANQLTTIPK 267



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 120/222 (54%), Gaps = 7/222 (3%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           I KE  + K  N+  L L  + +T L   + KL +L+ L+L  N+L + P +IG + NL 
Sbjct: 81  ISKEIEQLK--NLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQ 138

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L+ N LT+ P  +  LQ+L+ L L  N+L  +P  + KL  L+ L L  N++ T+  
Sbjct: 139 ELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPK 198

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           +I  L NL +L +  N+ + +P E G+LKNL  L L  N L  LPKEIG    L  L+L 
Sbjct: 199 EIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLD 258

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRL-----ESVPETLSKC 307
            N+L  IP  +G L NL  L L  N+      E + + L KC
Sbjct: 259 ANQLTTIPKEIGQLQNLQTLYLRNNQFSIEEKERIRKLLPKC 300



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 125/223 (56%), Gaps = 7/223 (3%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  L+L  + +  +   +E+L +L++LYL  N+L +L  +IG + NL  L L+ N LT
Sbjct: 66  QNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLT 125

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           + P  +  LQ L+ L L +N+L   P  + KL  L+ L L  N++ T+  +I  L  L  
Sbjct: 126 TFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQE 185

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
           L++  N++  +P E+G+L+NL  L L++N  + +P E G    L  L L  N+L  +P  
Sbjct: 186 LNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE 245

Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHL-------NEFNVE 316
           +G L NL  L L  N+L ++P+ + +  +L       N+F++E
Sbjct: 246 IGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQFSIE 288



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/132 (42%), Positives = 75/132 (56%), Gaps = 1/132 (0%)

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR 489
           +L LS+N L  LP  I  L+ L+ L L  N+L + P EI  LK L +L L +NQL  LP 
Sbjct: 1   MLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPV 60

Query: 490 AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
            IG L NL  L++  N L++I +EI  L+NL  LYL DN  L  +  E+    NL+ + L
Sbjct: 61  EIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYL-DNNQLTALSKEIGKLQNLKSLFL 119

Query: 550 DNCPLSQIPSEI 561
            N  L+  P EI
Sbjct: 120 SNNQLTTFPKEI 131


>gi|158536490|gb|ABW72739.1| flagellin-sensing 2-like protein [Eruca vesicaria]
          Length = 679

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 155/486 (31%), Positives = 243/486 (50%), Gaps = 46/486 (9%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-L 162
           LDL+ ++ +  +P  + KLT L +L LY N    S+PS+I  + N+  L L +N LT  +
Sbjct: 11  LDLTSNNFSGEIPSEMGKLTELNQLILYLNHFSGSIPSEIWRLKNIVYLDLRDNLLTGDV 70

Query: 163 PDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSM 220
           P+++     L ++   +N L   +P  +  L  L+I     NR     P  +  L NL+ 
Sbjct: 71  PEAICKTTSLELVGFENNNLTGRIPECLGDLVHLQIFIAGSNRFSGSVPVSVGTLVNLTD 130

Query: 221 LSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-I 277
            S+  N++  ++P E+G L NL +L L  N LE E+P EIGNC+ L+ L+L  N+L   I
Sbjct: 131 FSLDSNQLTGKIPREIGNLSNLQSLILTDNLLEGEIPAEIGNCSSLIQLELYGNQLTGAI 190

Query: 278 PDMLGNLINLTRLRLSYNRL-ESVPETLSKCVHLNEFNV-EGCALSSLPDGLLSSLTSIN 335
           P  LGNL+ L  LRL  N+L  S+P +L +   L    + E   +  +P+  +  LTS+ 
Sbjct: 191 PAELGNLVQLESLRLYKNKLNSSIPFSLFRLTKLTNLGLSENQLVGPIPEE-IGFLTSVK 249

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI-DKIPY--GIFSRAKNLSKVNMKDNLL 392
            +TL  N  T       T   ++  I    N I  ++P   G+ +  +NLS     DNLL
Sbjct: 250 VLTLHSNNLTGEFPQSITNMKNLTVITMGFNSISGELPANLGLLTNLRNLSA---HDNLL 306

Query: 393 TS-LPLDLGTWVGLTELNLGTNQIS------------------------KLSEDIQNLVN 427
           T  +P  +    GL  L+L  NQ++                        ++ +DI N  N
Sbjct: 307 TGPIPSSISNCTGLKVLDLSYNQMTGEIPSGLGRMNLTLLSLGPNRFTGEIPDDIFNCSN 366

Query: 428 LEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQLV 485
           +E+L L+ NN    L   IG L+KL+ L L  N L  ++P EIG L+EL  L L +N   
Sbjct: 367 MEILNLARNNFTGTLKPFIGKLQKLRILQLFSNSLTGAIPREIGNLRELSHLQLGTNHFT 426

Query: 486 S-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
             +P  I +LT L  + +  N+L+  IPEE+ +++ L  L L++N     IP   +   +
Sbjct: 427 GRIPGEISNLTLLQGIELDANDLEGPIPEEMFSMKQLTELDLSNNKFSGPIPVLFSKLES 486

Query: 544 LQIMSL 549
           L  ++L
Sbjct: 487 LTYLAL 492



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 224/489 (45%), Gaps = 92/489 (18%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSL-TSLPDSLANLQQLR 173
           +P  +   + L +L LYGN+L  ++P+++G +  L  L L +N L +S+P SL  L +L 
Sbjct: 166 IPAEIGNCSSLIQLELYGNQLTGAIPAELGNLVQLESLRLYKNKLNSSIPFSLFRLTKLT 225

Query: 174 VLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIR-E 230
            L L  N+L   +P  +  LTS+K+L L  N +    P  I  + NL++++M  N I  E
Sbjct: 226 NLGLSENQLVGPIPEEIGFLTSVKVLTLHSNNLTGEFPQSITNMKNLTVITMGFNSISGE 285

Query: 231 LPPELGELKNLVTLDLAHNHL--EELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINL 287
           LP  LG L NL  L  AH++L    +P  I NCT L  LDL +N++   IP  LG + NL
Sbjct: 286 LPANLGLLTNLRNLS-AHDNLLTGPIPSSISNCTGLKVLDLSYNQMTGEIPSGLGRM-NL 343

Query: 288 TRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
           T L L  NR    +P+ +  C ++   N                        L+RN FT 
Sbjct: 344 TLLSLGPNRFTGEIPDDIFNCSNMEILN------------------------LARNNFTG 379

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGL 405
                                    P+    + + L  + +  N LT ++P ++G    L
Sbjct: 380 TLK----------------------PF--IGKLQKLRILQLFSNSLTGAIPREIGNLREL 415

Query: 406 TELNLGTNQIS-KLSEDIQNLVNLEVLVL-SNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
           + L LGTN  + ++  +I NL  L+ + L +N+L   +P  + ++++L  LDL  NK   
Sbjct: 416 SHLQLGTNHFTGRIPGEISNLTLLQGIELDANDLEGPIPEEMFSMKQLTELDLSNNKFSG 475

Query: 464 -LPNEIGFLKELQRLILQSNQL-VSLPRAIGHLTNLSYLSVGEN---------------N 506
            +P     L+ L  L L  N+   S+P ++  L++L+ L +  N               N
Sbjct: 476 PIPVLFSKLESLTYLALHGNKFNGSIPGSLKSLSHLNTLDISRNLLTGTISSELISSMRN 535

Query: 507 LQ------------SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
           LQ            SIP E+G LE +  +  ++N    +IP  L  C N+  +      L
Sbjct: 536 LQLTLNFSNNLLSGSIPNELGKLEMVEQIDFSNNHFSGSIPRSLQACKNVFFLDFSRNNL 595

Query: 555 S-QIPSEIV 562
           S QIP E+ 
Sbjct: 596 SGQIPDEVF 604



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 184/408 (45%), Gaps = 81/408 (19%)

Query: 165 SLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
           ++ANL  L+VLDL  N    E+P  + KLT L  L L  N                    
Sbjct: 1   AIANLTYLQVLDLTSNNFSGEIPSEMGKLTELNQLILYLNHFSG---------------- 44

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDML 281
                  +P E+  LKN+V LDL  N L  ++P+ I   T L  +  ++N L   IP+ L
Sbjct: 45  ------SIPSEIWRLKNIVYLDLRDNLLTGDVPEAICKTTSLELVGFENNNLTGRIPECL 98

Query: 282 GNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
           G+L++L       NR   SVP ++   V+L +F                        +L 
Sbjct: 99  GDLVHLQIFIAGSNRFSGSVPVSVGTLVNLTDF------------------------SLD 134

Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS-LPLDL 399
            N+ T                        KIP  I     NL  + + DNLL   +P ++
Sbjct: 135 SNQLTG-----------------------KIPREI-GNLSNLQSLILTDNLLEGEIPAEI 170

Query: 400 GTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVLSNNLL-KKLPSSIGNLRKLKCLDLE 457
           G    L +L L  NQ++  +  ++ NLV LE L L  N L   +P S+  L KL  L L 
Sbjct: 171 GNCSSLIQLELYGNQLTGAIPAELGNLVQLESLRLYKNKLNSSIPFSLFRLTKLTNLGLS 230

Query: 458 ENKLES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IPEEI 514
           EN+L   +P EIGFL  ++ L L SN L    P++I ++ NL+ +++G N++   +P  +
Sbjct: 231 ENQLVGPIPEEIGFLTSVKVLTLHSNNLTGEFPQSITNMKNLTVITMGFNSISGELPANL 290

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLD-NCPLSQIPSEI 561
           G L NL  L  +DN     IP  ++ C+ L+++ L  N    +IPS +
Sbjct: 291 GLLTNLRNLSAHDNLLTGPIPSSISNCTGLKVLDLSYNQMTGEIPSGL 338



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 190/415 (45%), Gaps = 71/415 (17%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
            P S+  + +L  + +  N ++  LP+ +G +TNL  L   +N LT  +P S++N   L+
Sbjct: 262 FPQSITNMKNLTVITMGFNSISGELPANLGLLTNLRNLSAHDNLLTGPIPSSISNCTGLK 321

Query: 174 VLDLRHNKL------------------------NELPMVVYKLTSLKILYL-RFNRIKTV 208
           VLDL +N++                         E+P  ++  ++++IL L R N   T+
Sbjct: 322 VLDLSYNQMTGEIPSGLGRMNLTLLSLGPNRFTGEIPDDIFNCSNMEILNLARNNFTGTL 381

Query: 209 HPDIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVT 266
            P I  L  L +L +  N +   +P E+G L+ L  L L  NH    +P EI N T+L  
Sbjct: 382 KPFIGKLQKLRILQLFSNSLTGAIPREIGNLRELSHLQLGTNHFTGRIPGEISNLTLLQG 441

Query: 267 LDLQHNELVN-IPDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLP 324
           ++L  N+L   IP+ + ++  LT L LS N+    +P   SK   L    + G   +   
Sbjct: 442 IELDANDLEGPIPEEMFSMKQLTELDLSNNKFSGPIPVLFSKLESLTYLALHGNKFNGSI 501

Query: 325 DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVY-----SINFEHN------------- 366
            G L SL+ +N + +SRN  T   S   ++  S       ++NF +N             
Sbjct: 502 PGSLKSLSHLNTLDISRNLLTGTIS---SELISSMRNLQLTLNFSNNLLSGSIPNELGKL 558

Query: 367 ----QID--------KIPYGIFSRAKNLSKVNM-KDNLLTSLPLDLGTWVGL---TELNL 410
               QID         IP  +    KN+  ++  ++NL   +P ++    G+     LNL
Sbjct: 559 EMVEQIDFSNNHFSGSIPRSL-QACKNVFFLDFSRNNLSGQIPDEVFQQSGMDMIKSLNL 617

Query: 411 GTNQI-SKLSEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLES 463
             N + S + +   N+ +L  L LS NNL  ++P S+ NL  LK L+L  N L+ 
Sbjct: 618 SRNSLTSGIPQSFGNMTHLLSLDLSYNNLTGEIPESLANLSTLKHLNLASNNLKG 672


>gi|351706877|gb|EHB09796.1| Leucine-rich repeat-containing protein 1, partial [Heterocephalus
           glaber]
          Length = 472

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 175/344 (50%), Gaps = 27/344 (7%)

Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNEL 274
           L  L  L + DN+I+ LPPE+     LV LD++ N + E+P+ I  C  L   D   N L
Sbjct: 6   LVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPL 65

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSI 334
             +P+    L NLT L ++   L+S+PE +    +L    +    L+ LPD L       
Sbjct: 66  TRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL------- 118

Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS 394
                             TQ   +  ++  +N I  +P  I +   +L  + +  N L+ 
Sbjct: 119 ------------------TQLQRLEELDLGNNDIYNLPKSIGALL-HLKDLWLDGNQLSE 159

Query: 395 LPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCL 454
           LP ++G    L  L++  N++ +L E+I  L +L  LV+S NLL+ +P  IG L+KL  L
Sbjct: 160 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 219

Query: 455 DLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
            +++N+L  LP  +G  + L  L+L  N+L++LP+++G L  LS L+   N L S+P+EI
Sbjct: 220 KVDQNRLTHLPEALGDCENLTELVLTENRLLTLPKSVGKLKKLSNLNADRNKLVSLPKEI 279

Query: 515 GTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
           G   +L T++   N  L  IP E++  + L ++ +    LS +P
Sbjct: 280 GGCCSL-TVFCVRNNRLTWIPAEVSQATELHVLDVAGNRLSHLP 322



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/314 (35%), Positives = 167/314 (53%), Gaps = 8/314 (2%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+S++ I  +P S+     L+     GN L  LP     + NLTCL + + SL SL
Sbjct: 32  LVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 91

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P+++ NL  L  L+LR N L  LP  + +L  L+ L L  N I  +   I  L +L  L 
Sbjct: 92  PENIGNLYNLASLELRENLLTYLPDSLTQLQRLEELDLGNNDIYNLPKSIGALLHLKDLW 151

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
           +  N++ ELP E+G LKNL+ LD++ N LE LP+EI   T L  L +  N L  IPD +G
Sbjct: 152 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIG 211

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L  L+ L++  NRL  +PE L  C +L E  +    L +LP   +  L  ++N+   RN
Sbjct: 212 KLKKLSILKVDQNRLTHLPEALGDCENLTELVLTENRLLTLPKS-VGKLKKLSNLNADRN 270

Query: 343 KFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
           K  + P   GG    T V+ +   +N++  IP  + S+A  L  +++  N L+ LPL L 
Sbjct: 271 KLVSLPKEIGGCCSLT-VFCV--RNNRLTWIPAEV-SQATELHVLDVAGNRLSHLPLSLT 326

Query: 401 TWVGLTELNLGTNQ 414
           T + L  L L  NQ
Sbjct: 327 T-LKLKALWLSDNQ 339



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 121/387 (31%), Positives = 183/387 (47%), Gaps = 50/387 (12%)

Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
           Q   +  L  LGL++N +  LP  +AN  QL  LD+  N + E+P  +    +L+I    
Sbjct: 2   QFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFS 61

Query: 202 FNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
            N +  +      L NL+ LS+ D  ++ LP  +G L NL +L+L  N L  LP  +   
Sbjct: 62  GNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQL 121

Query: 262 TMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALS 321
             L  LDL +N++ N+P  +G L++L  L L  N+L  +P+ +    +L   +V    L 
Sbjct: 122 QRLEELDLGNNDIYNLPKSIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLE 181

Query: 322 SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKN 381
            LP+ + S LTS+ ++ +S+                        N ++ IP GI  + K 
Sbjct: 182 RLPEEI-SGLTSLTDLVISQ------------------------NLLETIPDGI-GKLKK 215

Query: 382 LSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKL 441
           LS + +  N LT LP  LG    LTEL                       VL+ N L  L
Sbjct: 216 LSILKVDQNRLTHLPEALGDCENLTEL-----------------------VLTENRLLTL 252

Query: 442 PSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLS 501
           P S+G L+KL  L+ + NKL SLP EIG    L    +++N+L  +P  +   T L  L 
Sbjct: 253 PKSVGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRNNRLTWIPAEVSQATELHVLD 312

Query: 502 VGENNLQSIPEEIGTLENLHTLYLNDN 528
           V  N L  +P  + TL+ L  L+L+DN
Sbjct: 313 VAGNRLSHLPLSLTTLK-LKALWLSDN 338



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 154/324 (47%), Gaps = 56/324 (17%)

Query: 264 LVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSL 323
           L  L L  NE+  +P  + N + L  L +S N +  +PE++S C  L   +  G  L+ L
Sbjct: 9   LRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRL 68

Query: 324 PDGL--LSSLT--SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
           P+    L +LT  S+N+I+L            P    ++Y                    
Sbjct: 69  PESFPELQNLTCLSVNDISLQ---------SLPENIGNLY-------------------- 99

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
            NL+ + +++NLLT LP  L     L EL+LG N I  L + I  L++L+ L L  N L 
Sbjct: 100 -NLASLELRENLLTYLPDSLTQLQRLEELDLGNNDIYNLPKSIGALLHLKDLWLDGNQLS 158

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
           +LP  IGNL+ L CLD+ EN+LE LP EI  L  L  L++  N L ++P  IG L  LS 
Sbjct: 159 ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSI 218

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN----------------------NIPFE 537
           L V +N L  +PE +G  ENL  L L +N  L                       ++P E
Sbjct: 219 LKVDQNRLTHLPEALGDCENLTELVLTENRLLTLPKSVGKLKKLSNLNADRNKLVSLPKE 278

Query: 538 LALCSNLQIMSLDNCPLSQIPSEI 561
           +  C +L +  + N  L+ IP+E+
Sbjct: 279 IGGCCSLTVFCVRNNRLTWIPAEV 302



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 164/359 (45%), Gaps = 27/359 (7%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS + I  LPP +     L EL +  N +  +P  I +   L     + N LT LP+S
Sbjct: 12  LGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPES 71

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
              LQ L  L +    L  LP  +  L +L  L LR N +  +   +  L  L  L + +
Sbjct: 72  FPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLQRLEELDLGN 131

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N I  LP  +G L +L  L L  N L ELP+EIGN   L+ LD+  N L  +P+ +  L 
Sbjct: 132 NDIYNLPKSIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLT 191

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
           +LT L +S N LE++P+ + K   L+   V+   L+ LP+  L    ++  + L+ N+  
Sbjct: 192 SLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTHLPEA-LGDCENLTELVLTENRLL 250

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
             P                             + K LS +N   N L SLP ++G    L
Sbjct: 251 TLPKS-------------------------VGKLKKLSNLNADRNKLVSLPKEIGGCCSL 285

Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
           T   +  N+++ +  ++     L VL ++ N L  LP S+  L KLK L L +N+ + L
Sbjct: 286 TVFCVRNNRLTWIPAEVSQATELHVLDVAGNRLSHLPLSLTTL-KLKALWLSDNQSQPL 343



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 124/223 (55%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+ +L+L ++ +T+LP S+ +L  LEEL L  N + +LP  IG + +L  L L  N L+ 
Sbjct: 100 NLASLELRENLLTYLPDSLTQLQRLEELDLGNNDIYNLPKSIGALLHLKDLWLDGNQLSE 159

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + NL+ L  LD+  N+L  LP  +  LTSL  L +  N ++T+   I  L  LS+L
Sbjct: 160 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 219

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  LP  LG+ +NL  L L  N L  LPK +G    L  L+   N+LV++P  +
Sbjct: 220 KVDQNRLTHLPEALGDCENLTELVLTENRLLTLPKSVGKLKKLSNLNADRNKLVSLPKEI 279

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
           G   +LT   +  NRL  +P  +S+   L+  +V G  LS LP
Sbjct: 280 GGCCSLTVFCVRNNRLTWIPAEVSQATELHVLDVAGNRLSHLP 322



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 1/186 (0%)

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
           F +   L K+ + DN +  LP ++  ++ L EL++  N I ++ E I     L++   S 
Sbjct: 3   FFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSG 62

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N L +LP S   L+ L CL + +  L+SLP  IG L  L  L L+ N L  LP ++  L 
Sbjct: 63  NPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLQ 122

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
            L  L +G N++ ++P+ IG L +L  L+L+ N  L+ +P E+    NL  + +    L 
Sbjct: 123 RLEELDLGNNDIYNLPKSIGALLHLKDLWLDGNQ-LSELPQEIGNLKNLLCLDVSENRLE 181

Query: 556 QIPSEI 561
           ++P EI
Sbjct: 182 RLPEEI 187


>gi|281341441|gb|EFB17025.1| hypothetical protein PANDA_011098 [Ailuropoda melanoleuca]
          Length = 1599

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 196/412 (47%), Gaps = 50/412 (12%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           LEEL L  N+L  LP     + NL  LGL++N +  LP  +AN  QL  LD+  N + E+
Sbjct: 8   LEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEI 67

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P                         I++   L +     N +  LP    +L++L  L 
Sbjct: 68  PE-----------------------SIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLA 104

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           L    L+ LP ++GN   LVTL+L+ N L ++P  L  L+ L +L L  N LE +P+TL 
Sbjct: 105 LNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVLPDTLG 164

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
              +L E  ++   LS+LP         + N+                    +  ++   
Sbjct: 165 ALPNLRELWLDRNQLSALP-------PELGNL------------------RRLVCLDVSE 199

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
           N+++++P         L+ + +  NLL  LP  +G    L+ L +  N++ +++E I + 
Sbjct: 200 NRLEELPA-ELGGLLLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDC 258

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
            NL  LVL+ NLL  LP S+G L KL  L+++ N+LE LP EIG    L  L L+ N+L 
Sbjct: 259 ENLSELVLTENLLTALPRSLGKLTKLTNLNVDRNRLEVLPPEIGGCVALSVLSLRDNRLA 318

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +LP  + H   L  L V  N L+S+P  +  L NL  L+L +N     + F+
Sbjct: 319 TLPPELAHTAELHVLDVAGNRLRSLPFALTHL-NLKALWLAENQAQPMLRFQ 369



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/323 (34%), Positives = 155/323 (47%), Gaps = 27/323 (8%)

Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
           ++L  L L  N L ELPK       L  L L  NE+  +P  + N + L  L +S N + 
Sbjct: 6   RSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIP 65

Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
            +PE++  C  L   +  G  LS LP+G  + L S+ ++ L+     A P          
Sbjct: 66  EIPESIKFCKALEIADFSGNPLSRLPEGF-TQLRSLAHLALNDVSLQALP---------- 114

Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
                          G      NL  + +++NLL SLP  L   V L +L+LG N++  L
Sbjct: 115 ---------------GDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVL 159

Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
            + +  L NL  L L  N L  LP  +GNLR+L CLD+ EN+LE LP E+G L  L  L+
Sbjct: 160 PDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLLLLTDLL 219

Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFEL 538
           L  N L  LP  IG L  LS L V +N L  + E IG  ENL  L L +N  L  +P  L
Sbjct: 220 LSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELVLTEN-LLTALPRSL 278

Query: 539 ALCSNLQIMSLDNCPLSQIPSEI 561
              + L  +++D   L  +P EI
Sbjct: 279 GKLTKLTNLNVDRNRLEVLPPEI 301



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 185/371 (49%), Gaps = 28/371 (7%)

Query: 189 VYKLT-SLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLA 247
           +Y+ + SL+ L L  N+++ +      L NL  L + DN+I+ LPPE+     LV LD++
Sbjct: 1   IYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVS 60

Query: 248 HNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKC 307
            N + E+P+ I  C  L   D   N L  +P+    L +L  L L+   L+++P  +   
Sbjct: 61  RNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQALPGDVGNL 120

Query: 308 VHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQ 367
            +L    +    L SLP   LS L  +  + L  N+    P                 + 
Sbjct: 121 ANLVTLELRENLLKSLP-ASLSFLVKLEQLDLGGNELEVLP-----------------DT 162

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
           +  +P        NL ++ +  N L++LP +LG    L  L++  N++ +L  ++  L+ 
Sbjct: 163 LGALP--------NLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLLL 214

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           L  L+LS NLL++LP  IG L++L  L +++N+L  +   IG  + L  L+L  N L +L
Sbjct: 215 LTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELVLTENLLTAL 274

Query: 488 PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIM 547
           PR++G LT L+ L+V  N L+ +P EIG    L  L L DN  L  +P ELA  + L ++
Sbjct: 275 PRSLGKLTKLTNLNVDRNRLEVLPPEIGGCVALSVLSLRDNR-LATLPPELAHTAELHVL 333

Query: 548 SLDNCPLSQIP 558
            +    L  +P
Sbjct: 334 DVAGNRLRSLP 344



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 178/376 (47%), Gaps = 27/376 (7%)

Query: 108 LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLA 167
           L  + +  LP    +L +L +L L  N++  LP ++     L  L ++ N +  +P+S+ 
Sbjct: 13  LDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIK 72

Query: 168 NLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
             + L + D   N L+ LP    +L SL  L L    ++ +  D+  L+NL  L +R+N 
Sbjct: 73  FCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENL 132

Query: 228 IRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
           ++ LP  L  L  L  LDL  N LE LP  +G    L  L L  N+L  +P  LGNL  L
Sbjct: 133 LKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 192

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
             L +S NRLE +P  L   + L +  +    L  LPDG+                    
Sbjct: 193 VCLDVSENRLEELPAELGGLLLLTDLLLSQNLLQRLPDGI-------------------- 232

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
                 Q   +  +  + N++ ++   I    +NLS++ + +NLLT+LP  LG    LT 
Sbjct: 233 -----GQLKQLSILKVDQNRLCEVTEAIGD-CENLSELVLTENLLTALPRSLGKLTKLTN 286

Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
           LN+  N++  L  +I   V L VL L +N L  LP  + +  +L  LD+  N+L SLP  
Sbjct: 287 LNVDRNRLEVLPPEIGGCVALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRSLPFA 346

Query: 468 IGFLKELQRLILQSNQ 483
           +  L  L+ L L  NQ
Sbjct: 347 LTHLN-LKALWLAENQ 361



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 174/363 (47%), Gaps = 50/363 (13%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
            ++ LD+S++ I  +P S++    LE     GN L+ LP     + +L  L L + SL +
Sbjct: 53  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQA 112

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + NL  L  L+LR N L  LP  +  L  L+ L L  N ++ +   +  L NL  L
Sbjct: 113 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALPNLREL 172

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  LPPELG L+ LV LD++ N LEELP E+G   +L  L L  N L  +PD +
Sbjct: 173 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLLLLTDLLLSQNLLQRLPDGI 232

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  L+ L++  NRL  V E +  C +L+E  +    L++LP   L  LT + N+ + R
Sbjct: 233 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELVLTENLLTALPRS-LGKLTKLTNLNVDR 291

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N+                                                L  LP ++G 
Sbjct: 292 NR------------------------------------------------LEVLPPEIGG 303

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
            V L+ L+L  N+++ L  ++ +   L VL ++ N L+ LP ++ +L  LK L L EN+ 
Sbjct: 304 CVALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRSLPFALTHL-NLKALWLAENQA 362

Query: 462 ESL 464
           + +
Sbjct: 363 QPM 365



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 1/187 (0%)

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           I+  +++L ++ +  N L  LP      + L +L L  N+I +L  ++ N + L  L +S
Sbjct: 1   IYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVS 60

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHL 494
            N + ++P SI   + L+  D   N L  LP     L+ L  L L    L +LP  +G+L
Sbjct: 61  RNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQALPGDVGNL 120

Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
            NL  L + EN L+S+P  +  L  L  L L  N  L  +P  L    NL+ + LD   L
Sbjct: 121 ANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNE-LEVLPDTLGALPNLRELWLDRNQL 179

Query: 555 SQIPSEI 561
           S +P E+
Sbjct: 180 SALPPEL 186



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 64/108 (59%), Gaps = 1/108 (0%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN+  L L+++ +T LP S+ KLT L  L +  N+L  LP +IG    L+ L L +N L 
Sbjct: 259 ENLSELVLTENLLTALPRSLGKLTKLTNLNVDRNRLEVLPPEIGGCVALSVLSLRDNRLA 318

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           +LP  LA+  +L VLD+  N+L  LP  +  L +LK L+L  N+ + +
Sbjct: 319 TLPPELAHTAELHVLDVAGNRLRSLPFALTHL-NLKALWLAENQAQPM 365



 Score = 43.1 bits (100), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 3/90 (3%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
            + NL++ ++ +  LPP +     L  L L  N+LA+LP ++ +   L  L +A N L S
Sbjct: 283 KLTNLNVDRNRLEVLPPEIGGCVALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRS 342

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYK 191
           LP +L +L  L+ L L  N+    PM+ ++
Sbjct: 343 LPFALTHL-NLKALWLAENQAQ--PMLRFQ 369


>gi|421111699|ref|ZP_15572172.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410802895|gb|EKS09040.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 360

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 157/294 (53%), Gaps = 32/294 (10%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+  LDL  + +T LP  + +L +L+ L LYGN L++LP +IG++ NL  L L+ N L 
Sbjct: 68  KNLRKLDLRYNQLTTLPKEIGQLHNLQSLSLYGNLLSTLPEEIGHLKNLKELSLSHNLLI 127

Query: 161 SLPDSLANLQQLRVLDLR-------------------------------HNKLNELPMVV 189
           +LP+++  LQ L VLDL                                 N+L  LP  +
Sbjct: 128 TLPENIGRLQNLEVLDLSVNLRSLIFRSEEIGISEEIGDLQNLKELNLTGNRLTTLPKEI 187

Query: 190 YKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHN 249
            KL SL+ L L  N +  +  +I  L NL  LS++ N++   P E+G+L++L  LDL++N
Sbjct: 188 GKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSLKGNRLTTFPKEIGKLQSLEKLDLSNN 247

Query: 250 HLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVH 309
            L  LPKEIG    L  L L+ N L  +P  +G L NL  L L  NRL ++P+ + K  +
Sbjct: 248 SLSTLPKEIGRLKNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGNRLTTLPKEIGKFQN 307

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           L E  +EG  L++LP G ++ L S+ ++ LS+N  + Y      ++   + ++F
Sbjct: 308 LIELRLEGNRLTTLPKG-IAKLQSLWSLNLSKNPLSVYEKKRIQKWFPEFGVDF 360



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/315 (34%), Positives = 167/315 (53%), Gaps = 25/315 (7%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L L+   ++ LP++I N   L  LDL++N+L  +P  +G L NL  L L  N L ++PE 
Sbjct: 50  LSLSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLSLYGNLLSTLPEE 109

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           +    +L E ++    L +LP+ +   L ++  + LS N               + S+ F
Sbjct: 110 IGHLKNLKELSLSHNLLITLPENI-GRLQNLEVLDLSVN---------------LRSLIF 153

Query: 364 EHNQIDKIPYGI---FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
              +I     GI       +NL ++N+  N LT+LP ++G    L +L+L  N ++ L +
Sbjct: 154 RSEEI-----GISEEIGDLQNLKELNLTGNRLTTLPKEIGKLQSLEKLDLSENSLAILPK 208

Query: 421 DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQ 480
           +I  L NL+ L L  N L   P  IG L+ L+ LDL  N L +LP EIG LK L+ L L+
Sbjct: 209 EIGRLQNLKRLSLKGNRLTTFPKEIGKLQSLEKLDLSNNSLSTLPKEIGRLKNLRELSLE 268

Query: 481 SNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELAL 540
            N+L +LP+ IG L NL  LS+G N L ++P+EIG  +NL  L L  N  L  +P  +A 
Sbjct: 269 GNRLSTLPKEIGRLKNLKELSLGGNRLTTLPKEIGKFQNLIELRLEGNR-LTTLPKGIAK 327

Query: 541 CSNLQIMSLDNCPLS 555
             +L  ++L   PLS
Sbjct: 328 LQSLWSLNLSKNPLS 342



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 113/332 (34%), Positives = 163/332 (49%), Gaps = 34/332 (10%)

Query: 184 ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVT 243
           +L     K + + IL L    IK +   I  L NL  L +R N++  LP E+G+L NL +
Sbjct: 36  DLREAFQKPSDVHILSLSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQS 95

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYN------RL 297
           L L  N L  LP+EIG+   L  L L HN L+ +P+ +G L NL  L LS N      R 
Sbjct: 96  LSLYGNLLSTLPEEIGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVNLRSLIFRS 155

Query: 298 E--SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQF 355
           E   + E +    +L E N+ G  L++LP   +  L S+  + LS N     P       
Sbjct: 156 EEIGISEEIGDLQNLKELNLTGNRLTTLPKE-IGKLQSLEKLDLSENSLAILPKE----- 209

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
                                 R +NL ++++K N LT+ P ++G    L +L+L  N +
Sbjct: 210 --------------------IGRLQNLKRLSLKGNRLTTFPKEIGKLQSLEKLDLSNNSL 249

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
           S L ++I  L NL  L L  N L  LP  IG L+ LK L L  N+L +LP EIG  + L 
Sbjct: 250 STLPKEIGRLKNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGNRLTTLPKEIGKFQNLI 309

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
            L L+ N+L +LP+ I  L +L  L++ +N L
Sbjct: 310 ELRLEGNRLTTLPKGIAKLQSLWSLNLSKNPL 341



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 163/296 (55%), Gaps = 11/296 (3%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L LS   I +LP  +  L +L +L L  N+L +LP +IG + NL  L L  N L++LP+ 
Sbjct: 50  LSLSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLSLYGNLLSTLPEE 109

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH--------PDIQYLSN 217
           + +L+ L+ L L HN L  LP  + +L +L++L L  N    +          +I  L N
Sbjct: 110 IGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVNLRSLIFRSEEIGISEEIGDLQN 169

Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNI 277
           L  L++  N++  LP E+G+L++L  LDL+ N L  LPKEIG    L  L L+ N L   
Sbjct: 170 LKELNLTGNRLTTLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSLKGNRLTTF 229

Query: 278 PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           P  +G L +L +L LS N L ++P+ + +  +L E ++EG  LS+LP   +  L ++  +
Sbjct: 230 PKEIGKLQSLEKLDLSNNSLSTLPKEIGRLKNLRELSLEGNRLSTLPKE-IGRLKNLKEL 288

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           +L  N+ T  P     +F ++  +  E N++  +P GI ++ ++L  +N+  N L+
Sbjct: 289 SLGGNRLTTLPK-EIGKFQNLIELRLEGNRLTTLPKGI-AKLQSLWSLNLSKNPLS 342



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 166/323 (51%), Gaps = 34/323 (10%)

Query: 147 TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK 206
           +++  L L+   + +LP  +ANL+ LR LDLR+N+L  LP                    
Sbjct: 45  SDVHILSLSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLP-------------------- 84

Query: 207 TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
               +I  L NL  LS+  N +  LP E+G LKNL  L L+HN L  LP+ IG    L  
Sbjct: 85  ---KEIGQLHNLQSLSLYGNLLSTLPEEIGHLKNLKELSLSHNLLITLPENIGRLQNLEV 141

Query: 267 LDLQHN--------ELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
           LDL  N        E + I + +G+L NL  L L+ NRL ++P+ + K   L + ++   
Sbjct: 142 LDLSVNLRSLIFRSEEIGISEEIGDLQNLKELNLTGNRLTTLPKEIGKLQSLEKLDLSEN 201

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
           +L+ LP   +  L ++  ++L  N+ T +P     +  S+  ++  +N +  +P  I  R
Sbjct: 202 SLAILPKE-IGRLQNLKRLSLKGNRLTTFPK-EIGKLQSLEKLDLSNNSLSTLPKEI-GR 258

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
            KNL +++++ N L++LP ++G    L EL+LG N+++ L ++I    NL  L L  N L
Sbjct: 259 LKNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGNRLTTLPKEIGKFQNLIELRLEGNRL 318

Query: 439 KKLPSSIGNLRKLKCLDLEENKL 461
             LP  I  L+ L  L+L +N L
Sbjct: 319 TTLPKGIAKLQSLWSLNLSKNPL 341



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 92/268 (34%), Positives = 146/268 (54%), Gaps = 12/268 (4%)

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
           E   K   ++  ++ G  + +LP  + ++L ++  + L  N+ T  P     Q  ++ S+
Sbjct: 39  EAFQKPSDVHILSLSGQEIKNLPRQI-ANLKNLRKLDLRYNQLTTLPKE-IGQLHNLQSL 96

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS----- 416
           +   N +  +P  I    KNL ++++  NLL +LP ++G    L  L+L  N  S     
Sbjct: 97  SLYGNLLSTLPEEI-GHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVNLRSLIFRS 155

Query: 417 ---KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKE 473
               +SE+I +L NL+ L L+ N L  LP  IG L+ L+ LDL EN L  LP EIG L+ 
Sbjct: 156 EEIGISEEIGDLQNLKELNLTGNRLTTLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQN 215

Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNN 533
           L+RL L+ N+L + P+ IG L +L  L +  N+L ++P+EIG L+NL  L L  N  L+ 
Sbjct: 216 LKRLSLKGNRLTTFPKEIGKLQSLEKLDLSNNSLSTLPKEIGRLKNLRELSLEGNR-LST 274

Query: 534 IPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +P E+    NL+ +SL    L+ +P EI
Sbjct: 275 LPKEIGRLKNLKELSLGGNRLTTLPKEI 302



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 11/153 (7%)

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
           L E  Q   ++ +L LS   +K LP  I NL+ L+ LDL  N+L +LP EIG L  LQ L
Sbjct: 37  LREAFQKPSDVHILSLSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSL 96

Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF- 536
            L  N L +LP  IGHL NL  LS+  N L ++PE IG L+NL  L L+ N  L ++ F 
Sbjct: 97  SLYGNLLSTLPEEIGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVN--LRSLIFR 154

Query: 537 --------ELALCSNLQIMSLDNCPLSQIPSEI 561
                   E+    NL+ ++L    L+ +P EI
Sbjct: 155 SEEIGISEEIGDLQNLKELNLTGNRLTTLPKEI 187


>gi|301780906|ref|XP_002925869.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Ailuropoda melanoleuca]
 gi|281346252|gb|EFB21836.1| hypothetical protein PANDA_015445 [Ailuropoda melanoleuca]
          Length = 603

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 144/481 (29%), Positives = 239/481 (49%), Gaps = 10/481 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           EN+  L++S + +  LP  +  L +L+ LYL  N+L  +P     + NL  L ++ N LT
Sbjct: 129 ENLQKLNVSHNKLQILPEEITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDISNNRLT 188

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           ++P S ++L  L  L+L  N+L  LP  +  +  LK L    N ++ V P++  + +L +
Sbjct: 189 TVPASFSSLSSLVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLEAVPPELANMESLEL 248

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL-PKEIGNCTMLVTLDLQHNELVNIPD 279
           L +R NK+R LP E    + L  L +  N +E L P+ + +   ++ LDL+ N+L ++PD
Sbjct: 249 LYLRRNKLRFLP-EFPSCRLLKELYVGENQIEILGPEHLKHLNSILVLDLRDNKLKSVPD 307

Query: 280 MLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
            +  L +L RL LS N + S+P +L K +HL    +EG  L ++   +++  T    +  
Sbjct: 308 EITLLQSLERLDLSNNDISSLPCSLGK-LHLKFLALEGNPLRTIRREIINKGTQ-EVLKY 365

Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
            R+K       GP+   SV           ++        K L     +  L+     D 
Sbjct: 366 LRSKIK---DDGPSPSDSVIGTAMTLPSESRVNVHAIITLKILDYSGKQTTLIPDEVFDA 422

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV-LSNNLLKKLPSSIGNLRKLKCLDLEE 458
                +T +N   NQ+ ++ + I  L  +   V LS N L  +   +  L+KL  LDL  
Sbjct: 423 VKGNIITSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRN 482

Query: 459 NKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI-PEEIGTL 517
           N L SLP E+  L +LQ + L  N+   LP  + H+  L  + +  N + S+ P+++  +
Sbjct: 483 NFLNSLPEEMESLIKLQTINLSFNRFKILPEVLYHIPTLETILISNNQVGSVDPQKMKAM 542

Query: 518 ENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQG 577
           ENL TL L +N  L  IP EL  C NL+ + LD  P     + I++ G + I+ YL+ + 
Sbjct: 543 ENLITLDLQNNDLLQ-IPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRI 601

Query: 578 P 578
           P
Sbjct: 602 P 602



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 174/332 (52%), Gaps = 7/332 (2%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L+L+  +L E+P+ +    + +  +   N      +      +LT+L +S N+L+S+ + 
Sbjct: 42  LNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSLTDD 101

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           L     L   ++    L+SLP   +  L ++  + +S NK    P    T   ++  +  
Sbjct: 102 LRLLPALTVLDIHDNQLTSLPSA-IRELENLQKLNVSHNKLQILPE-EITNLRNLKGLYL 159

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
           +HN++  IP G F +  NL  +++ +N LT++P    +   L  LNL +NQ+  L  +I 
Sbjct: 160 QHNELTCIPEG-FEQLFNLEDLDISNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAEIS 218

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
            +  L+ L  ++NLL+ +P  + N+  L+ L L  NKL  LP E    + L+ L +  NQ
Sbjct: 219 GMKRLKHLDCNSNLLEAVPPELANMESLELLYLRRNKLRFLP-EFPSCRLLKELYVGENQ 277

Query: 484 LVSL-PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           +  L P  + HL ++  L + +N L+S+P+EI  L++L  L L++N  ++++P  L    
Sbjct: 278 IEILGPEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNND-ISSLPCSLGKL- 335

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
           +L+ ++L+  PL  I  EI+  G   +++YL+
Sbjct: 336 HLKFLALEGNPLRTIRREIINKGTQEVLKYLR 367



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 154/303 (50%), Gaps = 29/303 (9%)

Query: 190 YKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHN 249
           ++ T L  L +  N+++++  D++ L  L++L + DN++  LP  + EL+NL  L+++HN
Sbjct: 80  WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN 139

Query: 250 HLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVH 309
            L+ LP+EI N   L  L LQHNEL  IP+    L NL  L +S NRL +VP + S    
Sbjct: 140 KLQILPEEITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDISNNRLTTVPASFSSLSS 199

Query: 310 LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
           L   N+    L SLP   +S +  + ++  + N   A P                     
Sbjct: 200 LVRLNLSSNQLKSLP-AEISGMKRLKHLDCNSNLLEAVPPE------------------- 239

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS-EDIQNLVNL 428
                  +  ++L  + ++ N L  LP +  +   L EL +G NQI  L  E +++L ++
Sbjct: 240 ------LANMESLELLYLRRNKLRFLP-EFPSCRLLKELYVGENQIEILGPEHLKHLNSI 292

Query: 429 EVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLP 488
            VL L +N LK +P  I  L+ L+ LDL  N + SLP  +G L  L+ L L+ N L ++ 
Sbjct: 293 LVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGKL-HLKFLALEGNPLRTIR 351

Query: 489 RAI 491
           R I
Sbjct: 352 REI 354


>gi|302788500|ref|XP_002976019.1| hypothetical protein SELMODRAFT_415912 [Selaginella moellendorffii]
 gi|300156295|gb|EFJ22924.1| hypothetical protein SELMODRAFT_415912 [Selaginella moellendorffii]
          Length = 1048

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 166/508 (32%), Positives = 245/508 (48%), Gaps = 21/508 (4%)

Query: 75  PKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGN 134
           P        P  A        + C    +  L L +  +      + +L  L+ L L+ N
Sbjct: 65  PGDRLSSWNPSNAGAPCRWRGVSCFAGRVWELHLPRMYLQGSIADLGRLGSLDTLSLHSN 124

Query: 135 KL-ASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLRVLDLRHNKL-NELPMVVYK 191
               S+P  +   +NL  + L  N+    +P SLA LQ+L+VL+L +N+L   +P  + K
Sbjct: 125 AFNGSIPDSLSAASNLRVIYLHNNAFDGQIPASLAALQKLQVLNLANNRLTGGIPRELGK 184

Query: 192 LTSLKILYLRFNRIKTVHP-DIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHN 249
           LTSLK L L  N +    P ++   S L  +++  N++   +PP LGEL  L  L L  N
Sbjct: 185 LTSLKTLDLSINFLSAGIPSEVSNCSRLLYINLSKNRLTGSIPPSLGELGLLRKLALGGN 244

Query: 250 HLEEL-PKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRL-ESVPETLSK 306
            L  + P  +GNC+ LV+LDL+HN L   IPD L  L  L RL LS N L   +   L  
Sbjct: 245 ELTGMIPSSLGNCSQLVSLDLEHNLLSGAIPDPLYQLRLLERLFLSTNMLIGGISPALGN 304

Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
              L++  ++  AL       + +L  +  + LS N  T          T++  ++   N
Sbjct: 305 FSVLSQLFLQDNALGGPIPASVGALKQLQVLNLSGNALTGNIPPQIAGCTTLQVLDVRVN 364

Query: 367 QID-KIP--YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS-KLSEDI 422
            ++ +IP   G  S+  NL+     +N+  S+P +L     L  L L  N++S KL +  
Sbjct: 365 ALNGEIPTELGSLSQLANLTL--SFNNISGSIPSELLNCRKLQILRLQGNKLSGKLPDSW 422

Query: 423 QNLVNLEVLVL-SNNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQ 480
            +L  L++L L  NNL  ++PSS+ N+  LK L L  N L   +P  IG L+ELQ L L 
Sbjct: 423 NSLTGLQILNLRGNNLSGEIPSSLLNILSLKRLSLSYNSLSGNVPLTIGRLQELQSLSLS 482

Query: 481 SNQL-VSLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFEL 538
            N L  S+P  IG+ +NL+ L    N L   +P EIG L  L  L L DN     IP  L
Sbjct: 483 HNSLEKSIPPEIGNCSNLAVLEASYNRLDGPLPPEIGYLSKLQRLQLRDNKLSGEIPETL 542

Query: 539 ALCSNLQIMSLDNCPLS-QIPSEIVVGG 565
             C NL  + + N  LS  IP  +++GG
Sbjct: 543 IGCKNLTYLHIGNNRLSGTIP--VLLGG 568



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 142/451 (31%), Positives = 225/451 (49%), Gaps = 19/451 (4%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTSL- 162
           LDLS + ++  +P  V   + L  + L  N+L  S+P  +G +  L  L L  N LT + 
Sbjct: 191 LDLSINFLSAGIPSEVSNCSRLLYINLSKNRLTGSIPPSLGELGLLRKLALGGNELTGMI 250

Query: 163 PDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNR-IKTVHPDIQYLSNLSM 220
           P SL N  QL  LDL HN L   +P  +Y+L  L+ L+L  N  I  + P +   S LS 
Sbjct: 251 PSSLGNCSQLVSLDLEHNLLSGAIPDPLYQLRLLERLFLSTNMLIGGISPALGNFSVLSQ 310

Query: 221 LSMRDNKIRE-LPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNEL-VNI 277
           L ++DN +   +P  +G LK L  L+L+ N L   +P +I  CT L  LD++ N L   I
Sbjct: 311 LFLQDNALGGPIPASVGALKQLQVLNLSGNALTGNIPPQIAGCTTLQVLDVRVNALNGEI 370

Query: 278 PDMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSS-LPDGLLSSLTSIN 335
           P  LG+L  L  L LS+N +  S+P  L  C  L    ++G  LS  LPD   +SLT + 
Sbjct: 371 PTELGSLSQLANLTLSFNNISGSIPSELLNCRKLQILRLQGNKLSGKLPDSW-NSLTGLQ 429

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK-IPYGIFSRAKNLSKVNMKDNLL-T 393
            + L  N  +           S+  ++  +N +   +P  I  R + L  +++  N L  
Sbjct: 430 ILNLRGNNLSGEIPSSLLNILSLKRLSLSYNSLSGNVPLTI-GRLQELQSLSLSHNSLEK 488

Query: 394 SLPLDLGTWVGLTELNLGTNQI-SKLSEDIQNLVNLEVLVLSNNLLK-KLPSSIGNLRKL 451
           S+P ++G    L  L    N++   L  +I  L  L+ L L +N L  ++P ++   + L
Sbjct: 489 SIPPEIGNCSNLAVLEASYNRLDGPLPPEIGYLSKLQRLQLRDNKLSGEIPETLIGCKNL 548

Query: 452 KCLDLEENKLE-SLPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS 509
             L +  N+L  ++P  +G L+++Q++ L++N L   +P +   L NL  L V  N+L  
Sbjct: 549 TYLHIGNNRLSGTIPVLLGGLEQMQQIRLENNHLTGGIPASFSALVNLQALDVSVNSLTG 608

Query: 510 -IPEEIGTLENLHTLYLNDNTCLNNIPFELA 539
            +P  +  LENL +L ++ N     IP  L+
Sbjct: 609 PVPSFLANLENLRSLNVSYNHLQGEIPPALS 639


>gi|42408787|dbj|BAD10022.1| putative receptor protein kinase [Oryza sativa Japonica Group]
          Length = 1104

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 140/447 (31%), Positives = 214/447 (47%), Gaps = 43/447 (9%)

Query: 116 LPPSVEKLTHLEELYLYGNKL--ASLPSQIGYVTNLTCLGLAENSLT-SLPDSLANLQQL 172
           +P S+  L  L+ L   GN+     LP +IG  T+LT LGLAE  ++ SLP ++ NL+++
Sbjct: 191 IPASIGNLKKLQVLRAGGNQALKGPLPPEIGGCTDLTMLGLAETGISGSLPATIGNLKKI 250

Query: 173 RVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
           + + +    L   +P  +   T L  LYL  N +                         +
Sbjct: 251 QTIAIYTAMLTGSIPESIGNCTELTSLYLYQNTLSG----------------------GI 288

Query: 232 PPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTR 289
           PP+LG+LK L T+ L  N L   +P EIGNC  LV +DL  NEL   IP   G L NL +
Sbjct: 289 PPQLGQLKKLQTVLLWQNQLVGTIPPEIGNCKELVLIDLSLNELTGPIPRSFGGLPNLQQ 348

Query: 290 LRLSYNRLESV-PETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL---SRNKFT 345
           L+LS N+L  V P  LS C  L +  V+    + L   +      + N+TL    +N+ T
Sbjct: 349 LQLSTNKLTGVIPPELSNCTSLTDIEVDN---NQLTGAIGVDFPRLRNLTLFYAWQNRLT 405

Query: 346 AYPSGGPTQFTSVYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
                   Q   + S++  +N +   IP  +F+       + + ++L   +P ++G    
Sbjct: 406 GGIPASLAQCEGLQSLDLSYNNLTGAIPRELFALQNLTKLLLLSNDLAGFIPPEIGNCTN 465

Query: 405 LTELNLGTNQISK-LSEDIQNLVNLEVLVLSNN-LLKKLPSSIGNLRKLKCLDLEENKLE 462
           L  L L  N++S  +  +I NL NL  L L  N L   LP+++     L+ +DL  N L 
Sbjct: 466 LYRLRLNGNRLSGTIPAEIGNLKNLNFLDLGGNRLTGPLPAAMSGCDNLEFMDLHSNALT 525

Query: 463 -SLPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLEN 519
            +LP ++   + LQ + +  N+L   L   IG L  L+ L++G+N +   IP E+G+ E 
Sbjct: 526 GTLPGDL--PRSLQFVDVSDNRLTGVLGAGIGSLPELTKLNLGKNRISGGIPPELGSCEK 583

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQI 546
           L  L L DN     IP EL     L+I
Sbjct: 584 LQLLDLGDNALSGGIPPELGKLPFLEI 610



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 190/403 (47%), Gaps = 15/403 (3%)

Query: 161 SLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNL 218
           ++P  L +L +L  LDL  N+L   +P  + +L  L+ L L  N ++   PD I  L+ L
Sbjct: 118 AIPKELGDLAELSTLDLTKNQLTGAIPAELCRLRKLQSLALNSNSLRGAIPDAIGNLTGL 177

Query: 219 SMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHL--EELPKEIGNCTMLVTLDLQHNELV 275
           + L++ DN++   +P  +G LK L  L    N      LP EIG CT L  L L    + 
Sbjct: 178 TSLTLYDNELSGAIPASIGNLKKLQVLRAGGNQALKGPLPPEIGGCTDLTMLGLAETGIS 237

Query: 276 N-IPDMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
             +P  +GNL  +  + +    L  S+PE++  C  L    +    LS      L  L  
Sbjct: 238 GSLPATIGNLKKIQTIAIYTAMLTGSIPESIGNCTELTSLYLYQNTLSGGIPPQLGQLKK 297

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLL 392
           +  + L +N+              +  I+   N++   IP   F    NL ++ +  N L
Sbjct: 298 LQTVLLWQNQLVGTIPPEIGNCKELVLIDLSLNELTGPIPRS-FGGLPNLQQLQLSTNKL 356

Query: 393 TS-LPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVL-VLSNNLLKKLPSSIGNLR 449
           T  +P +L     LT++ +  NQ++  +  D   L NL +     N L   +P+S+    
Sbjct: 357 TGVIPPELSNCTSLTDIEVDNNQLTGAIGVDFPRLRNLTLFYAWQNRLTGGIPASLAQCE 416

Query: 450 KLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNL 507
            L+ LDL  N L  ++P E+  L+ L +L+L SN L   +P  IG+ TNL  L +  N L
Sbjct: 417 GLQSLDLSYNNLTGAIPRELFALQNLTKLLLLSNDLAGFIPPEIGNCTNLYRLRLNGNRL 476

Query: 508 Q-SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
             +IP EIG L+NL+ L L  N     +P  ++ C NL+ M L
Sbjct: 477 SGTIPAEIGNLKNLNFLDLGGNRLTGPLPAAMSGCDNLEFMDL 519



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 184/399 (46%), Gaps = 70/399 (17%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
           +PP + +L  L+ + L+ N+L  ++P +IG    L  + L+ N LT  +P S   L  L+
Sbjct: 288 IPPQLGQLKKLQTVLLWQNQLVGTIPPEIGNCKELVLIDLSLNELTGPIPRSFGGLPNLQ 347

Query: 174 VLDLRHNKLNE-LPMVVYKLTSLKILYLRFNRI-KTVHPDIQYLSNLSMLSMRDNKIRE- 230
            L L  NKL   +P  +   TSL  + +  N++   +  D   L NL++     N++   
Sbjct: 348 QLQLSTNKLTGVIPPELSNCTSLTDIEVDNNQLTGAIGVDFPRLRNLTLFYAWQNRLTGG 407

Query: 231 LPPELGELKNLVTLDLAHNHLEE-------------------------LPKEIGNCTMLV 265
           +P  L + + L +LDL++N+L                           +P EIGNCT L 
Sbjct: 408 IPASLAQCEGLQSLDLSYNNLTGAIPRELFALQNLTKLLLLSNDLAGFIPPEIGNCTNLY 467

Query: 266 TLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALS-S 322
            L L  N L   IP  +GNL NL  L L  NRL   +P  +S C +L   ++   AL+ +
Sbjct: 468 RLRLNGNRLSGTIPAEIGNLKNLNFLDLGGNRLTGPLPAAMSGCDNLEFMDLHSNALTGT 527

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LP  L  SL  ++   +S N+ T     G                I  +P         L
Sbjct: 528 LPGDLPRSLQFVD---VSDNRLTGVLGAG----------------IGSLP--------EL 560

Query: 383 SKVNMKDNLLTS-LPLDLGTWVGLTELNLGTNQISK-LSEDIQNLVNLEV-LVLS-NNLL 438
           +K+N+  N ++  +P +LG+   L  L+LG N +S  +  ++  L  LE+ L LS N L 
Sbjct: 561 TKLNLGKNRISGGIPPELGSCEKLQLLDLGDNALSGGIPPELGKLPFLEISLNLSCNRLS 620

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
            ++PS    L KL CLD+  N+L       G L+ L RL
Sbjct: 621 GEIPSQFAGLDKLGCLDVSYNQLS------GSLEPLARL 653



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 121/245 (49%), Gaps = 13/245 (5%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
           +PP +   T+L  L L GN+L  ++P++IG + NL  L L  N LT  LP +++    L 
Sbjct: 456 IPPEIGNCTNLYRLRLNGNRLSGTIPAEIGNLKNLNFLDLGGNRLTGPLPAAMSGCDNLE 515

Query: 174 VLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTV-HPDIQYLSNLSMLSMRDNKIRE- 230
            +DL  N L   LP  + +  SL+ + +  NR+  V    I  L  L+ L++  N+I   
Sbjct: 516 FMDLHSNALTGTLPGDLPR--SLQFVDVSDNRLTGVLGAGIGSLPELTKLNLGKNRISGG 573

Query: 231 LPPELGELKNLVTLDLAHNHLEE-LPKEIGNCTML-VTLDLQHNELVN-IPDMLGNLINL 287
           +PPELG  + L  LDL  N L   +P E+G    L ++L+L  N L   IP     L  L
Sbjct: 574 IPPELGSCEKLQLLDLGDNALSGGIPPELGKLPFLEISLNLSCNRLSGEIPSQFAGLDKL 633

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS-LPDGLLSSLTSINNITLSRNKFTA 346
             L +SYN+L    E L++  +L   N+   A S  LPD        IN+I  + N    
Sbjct: 634 GCLDVSYNQLSGSLEPLARLENLVTLNISYNAFSGELPDTAFFQKLPINDI--AGNHLLV 691

Query: 347 YPSGG 351
             SGG
Sbjct: 692 VGSGG 696



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 24/123 (19%)

Query: 427 NLEVLVLSN-NLLKKLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQL 484
           +L+ LVLS  NL   +P  +G+L +L  LDL +N+L  ++P E+  L++LQ L L SN L
Sbjct: 104 SLKTLVLSGTNLTGAIPKELGDLAELSTLDLTKNQLTGAIPAELCRLRKLQSLALNSNSL 163

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
                                   +IP+ IG L  L +L L DN     IP  +     L
Sbjct: 164 RG----------------------AIPDAIGNLTGLTSLTLYDNELSGAIPASIGNLKKL 201

Query: 545 QIM 547
           Q++
Sbjct: 202 QVL 204



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)

Query: 106 LDLSKSSITH-LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-L 162
           +D+S + +T  L   +  L  L +L L  N++   +P ++G    L  L L +N+L+  +
Sbjct: 539 VDVSDNRLTGVLGAGIGSLPELTKLNLGKNRISGGIPPELGSCEKLQLLDLGDNALSGGI 598

Query: 163 PDSLANLQQLRV-LDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           P  L  L  L + L+L  N+L  E+P     L  L  L + +N++      +  L NL  
Sbjct: 599 PPELGKLPFLEISLNLSCNRLSGEIPSQFAGLDKLGCLDVSYNQLSGSLEPLARLENLVT 658

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHL 251
           L++  N      P+    + L   D+A NHL
Sbjct: 659 LNISYNAFSGELPDTAFFQKLPINDIAGNHL 689


>gi|359751209|emb|CCF03507.1| receptor kinase [Arabidopsis lyrata]
          Length = 1162

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 163/486 (33%), Positives = 241/486 (49%), Gaps = 51/486 (10%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-L 162
           LDL+ ++ T  +P  + KLT L EL LY N    S+PS+I  + NL  L L  N LT  +
Sbjct: 101 LDLTSNNFTGEIPAEIGKLTELNELSLYLNYFSGSIPSEIWELKNLMSLDLRNNLLTGDV 160

Query: 163 PDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSM 220
           P ++   + L V+ + +N L   +P  +  L  L++     NR+    P  +  L NL+ 
Sbjct: 161 PKAICKTRTLVVVGVGNNNLTGNIPDCLGDLVHLEVFVADINRLSGSIPVTVGTLVNLTN 220

Query: 221 LSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-I 277
           L +  N++   +P E+G L N+  L L  N LE E+P EIGNCT L+ L+L  N+L   I
Sbjct: 221 LDLSGNQLTGRIPREIGNLLNIQALVLFDNLLEGEIPAEIGNCTTLIDLELYGNQLTGRI 280

Query: 278 PDMLGNLINLTRLRLSYNRL-ESVPETLSKCVHLNEFNV-EGCALSSLPDGLLSSLTSIN 335
           P  LGNL+ L  LRL  N L  S+P +L +   L    + E   +  +P+  + SL S+ 
Sbjct: 281 PAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLRYLGLSENQLVGPIPEE-IGSLKSLQ 339

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI-DKIPY--GIFSRAKNLSKVNMKDNLL 392
            +TL  N  T       T   ++  +    N I  ++P   G+ +  +NLS     DN L
Sbjct: 340 VLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGELPADLGLLTNLRNLSA---HDNHL 396

Query: 393 TS-------------------------LPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLV 426
           T                          +P  LG  + LT L+LG N+ + ++ +DI N  
Sbjct: 397 TGPIPSSISNCTGLKLLDLSFNKMTGKIPRGLGR-LNLTALSLGPNRFTGEIPDDIFNCS 455

Query: 427 NLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQL 484
           N+E L L+ NNL   L   IG L+KL+   +  N L   +P EIG L+EL  L L SN+ 
Sbjct: 456 NMETLNLAGNNLTGTLKPLIGKLKKLRIFQVSSNSLTGKIPGEIGNLRELILLYLHSNRF 515

Query: 485 V-SLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
             ++PR I +LT L  L +  N+L+  IPEE+  +  L  L L+ N     IP   AL S
Sbjct: 516 TGTIPREISNLTLLQGLGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIP---ALFS 572

Query: 543 NLQIMS 548
            LQ ++
Sbjct: 573 KLQSLT 578



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 130/398 (32%), Positives = 190/398 (47%), Gaps = 80/398 (20%)

Query: 162 LPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           L  ++ANL  L+VLDL  N    E+P  + KLT L  L L  N          Y S    
Sbjct: 88  LSPAIANLTYLQVLDLTSNNFTGEIPAEIGKLTELNELSLYLN----------YFSG--- 134

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELV-NIP 278
                     +P E+ ELKNL++LDL +N L  ++PK I     LV + + +N L  NIP
Sbjct: 135 ---------SIPSEIWELKNLMSLDLRNNLLTGDVPKAICKTRTLVVVGVGNNNLTGNIP 185

Query: 279 DMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           D LG+L++L       NRL  S+P T+   V+L                         N+
Sbjct: 186 DCLGDLVHLEVFVADINRLSGSIPVTVGTLVNL------------------------TNL 221

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS-LP 396
            LS N+ T                        +IP  I     N+  + + DNLL   +P
Sbjct: 222 DLSGNQLTG-----------------------RIPREI-GNLLNIQALVLFDNLLEGEIP 257

Query: 397 LDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVL-SNNLLKKLPSSIGNLRKLKCL 454
            ++G    L +L L  NQ++ ++  ++ NLV LE L L  NNL   LPSS+  L +L+ L
Sbjct: 258 AEIGNCTTLIDLELYGNQLTGRIPAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLRYL 317

Query: 455 DLEENKLES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IP 511
            L EN+L   +P EIG LK LQ L L SN L    P++I +L NL+ +++G N +   +P
Sbjct: 318 GLSENQLVGPIPEEIGSLKSLQVLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGELP 377

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
            ++G L NL  L  +DN     IP  ++ C+ L+++ L
Sbjct: 378 ADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLKLLDL 415



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 219/473 (46%), Gaps = 43/473 (9%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSL-TSLPDSLANLQQLR 173
           +P  +   T L +L LYGN+L   +P+++G +  L  L L  N+L +SLP SL  L +LR
Sbjct: 256 IPAEIGNCTTLIDLELYGNQLTGRIPAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLR 315

Query: 174 VLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIR-E 230
            L L  N+L   +P  +  L SL++L L  N +    P  I  L NL++++M  N I  E
Sbjct: 316 YLGLSENQLVGPIPEEIGSLKSLQVLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGE 375

Query: 231 LPPELGELKNLVTLDLAHNHLEE-LPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLT 288
           LP +LG L NL  L    NHL   +P  I NCT L  LDL  N++   IP  LG L NLT
Sbjct: 376 LPADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLKLLDLSFNKMTGKIPRGLGRL-NLT 434

Query: 289 RLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            L L  NR    +P+ +  C ++   N+ G  L+     L+  L  +    +S N  T  
Sbjct: 435 ALSLGPNRFTGEIPDDIFNCSNMETLNLAGNNLTGTLKPLIGKLKKLRIFQVSSNSLTG- 493

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLT 406
                                 KIP G     + L  + +  N  T ++P ++     L 
Sbjct: 494 ----------------------KIP-GEIGNLRELILLYLHSNRFTGTIPREISNLTLLQ 530

Query: 407 ELNLGTNQI-SKLSEDIQNLVNLEVLVLSNNLLKK-LPSSIGNLRKLKCLDLEENKLE-S 463
            L L  N +   + E++ +++ L  L LS+N     +P+    L+ L  L L  NK   S
Sbjct: 531 GLGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIPALFSKLQSLTYLGLHGNKFNGS 590

Query: 464 LPNEIGFLKELQRLILQSNQLV-SLPRAI-GHLTNLS-YLSVGENNLQ-SIPEEIGTLEN 519
           +P  +  L  L    +  N L  ++P  +   + N+  YL+   N L  +I  E+G LE 
Sbjct: 591 IPASLKSLSLLNTFDISDNLLTGTIPEELLSSMKNMQLYLNFSNNFLTGTISNELGKLEM 650

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS-QIPSEIV-VGGPSLII 570
           +  +  ++N    +IP  L  C N+  +      LS QIP E+   GG  +II
Sbjct: 651 VQEIDFSNNLFSGSIPISLKACKNVFTLDFSRNNLSGQIPDEVFHQGGMDMII 703



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 195/431 (45%), Gaps = 65/431 (15%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
            P S+  L +L  + +  N ++  LP+ +G +TNL  L   +N LT  +P S++N   L+
Sbjct: 352 FPQSITNLRNLTVMTMGFNYISGELPADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLK 411

Query: 174 VLDLRHNKL------------------------NELPMVVYKLTSLKILYLRFNRI-KTV 208
           +LDL  NK+                         E+P  ++  ++++ L L  N +  T+
Sbjct: 412 LLDLSFNKMTGKIPRGLGRLNLTALSLGPNRFTGEIPDDIFNCSNMETLNLAGNNLTGTL 471

Query: 209 HPDIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVT 266
            P I  L  L +  +  N +  ++P E+G L+ L+ L L  N     +P+EI N T+L  
Sbjct: 472 KPLIGKLKKLRIFQVSSNSLTGKIPGEIGNLRELILLYLHSNRFTGTIPREISNLTLLQG 531

Query: 267 LDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE-------------------------SV 300
           L L  N+L   IP+ + +++ L+ L LS N+                           S+
Sbjct: 532 LGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIPALFSKLQSLTYLGLHGNKFNGSI 591

Query: 301 PETLSKCVHLNEFNVEGCALS-SLPDGLLSSLTSIN-NITLSRNKFTAYPSGGPTQFTSV 358
           P +L     LN F++    L+ ++P+ LLSS+ ++   +  S N  T   S    +   V
Sbjct: 592 PASLKSLSLLNTFDISDNLLTGTIPEELLSSMKNMQLYLNFSNNFLTGTISNELGKLEMV 651

Query: 359 YSINFEHNQI-DKIPYGIFSRAKNLSKVNM-KDNLLTSLPLDL---GTWVGLTELNLGTN 413
             I+F +N     IP  +    KN+  ++  ++NL   +P ++   G    +  LNL  N
Sbjct: 652 QEIDFSNNLFSGSIPISL-KACKNVFTLDFSRNNLSGQIPDEVFHQGGMDMIISLNLSRN 710

Query: 414 QISK-LSEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
            +S  + E   NL +L  L LS NNL  ++P S+ NL  LK L L  N L+    E G  
Sbjct: 711 SLSGGIPEGFGNLTHLVSLDLSSNNLTGEIPESLVNLSTLKHLKLASNHLKGHVPETGVF 770

Query: 472 KELQRLILQSN 482
           K +    L  N
Sbjct: 771 KNINASDLMGN 781



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 155/341 (45%), Gaps = 58/341 (17%)

Query: 231 LPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLT 288
           L P +  L  L  LDL  N+   E+P EIG  T L  L L  N     IP  +  L NL 
Sbjct: 88  LSPAIANLTYLQVLDLTSNNFTGEIPAEIGKLTELNELSLYLNYFSGSIPSEIWELKNLM 147

Query: 289 RLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSS-LPDGLLSSLTSINNITLSRNKFTA 346
            L L  N L   VP+ + K   L    V    L+  +PD  L  L  +       N+ + 
Sbjct: 148 SLDLRNNLLTGDVPKAICKTRTLVVVGVGNNNLTGNIPD-CLGDLVHLEVFVADINRLSG 206

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
                                                          S+P+ +GT V LT
Sbjct: 207 -----------------------------------------------SIPVTVGTLVNLT 219

Query: 407 ELNLGTNQIS-KLSEDIQNLVNLEVLVLSNNLLK-KLPSSIGNLRKLKCLDLEENKLES- 463
            L+L  NQ++ ++  +I NL+N++ LVL +NLL+ ++P+ IGN   L  L+L  N+L   
Sbjct: 220 NLDLSGNQLTGRIPREIGNLLNIQALVLFDNLLEGEIPAEIGNCTTLIDLELYGNQLTGR 279

Query: 464 LPNEIGFLKELQRLILQSNQL-VSLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLH 521
           +P E+G L +L+ L L  N L  SLP ++  LT L YL + EN L   IPEEIG+L++L 
Sbjct: 280 IPAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLRYLGLSENQLVGPIPEEIGSLKSLQ 339

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLD-NCPLSQIPSEI 561
            L L+ N      P  +    NL +M++  N    ++P+++
Sbjct: 340 VLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGELPADL 380


>gi|297830120|ref|XP_002882942.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328782|gb|EFH59201.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 584

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 153/493 (31%), Positives = 240/493 (48%), Gaps = 24/493 (4%)

Query: 105 NLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPD 164
           +LD+S +SIT LP  +     L +L    N+   LP  IG   +L+ L  + N ++SLP+
Sbjct: 95  SLDVSFNSITELPEQIGSAISLVKLDCSSNRFKELPESIGRCLDLSDLKASNNQISSLPE 154

Query: 165 SLANLQQLRVLDLRHNKLNELPM-VVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSM 223
            + N  +L  LD+  N+L  L    +   T L  L    N +  +  +I  LS L  L +
Sbjct: 155 DMVNCSKLSKLDVEGNRLTALSENHIASWTMLTELNASKNMLSGLPQNIGSLSRLIRLDL 214

Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGN 283
             NKI  +PP +G+  +LV   L  N L  LP EIG+ + L TLDL+ N+L   P     
Sbjct: 215 HQNKILSVPPSIGDCSSLVEFYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACK 274

Query: 284 LINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL----SSLPDGLLSSLTSINNITL 339
           L  L+ L LS N L  +   L     L +  + G  L    SSL +G  ++L       L
Sbjct: 275 L-KLSYLDLSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRL 333

Query: 340 SRNKFTAYPSGGPTQFTSVYS----------INFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
           S ++ T+  +  PT+   + S          ++ E   +  +P  ++   + ++KVN+  
Sbjct: 334 SNSEETS--ASTPTKENVIASAARMSISSKELSLEGLNLSAVPSEVWESGE-ITKVNLSK 390

Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI-QNLVNLEVLVLSNNLLKKLP-SSIGN 447
           N +  LP  L T V L  L L  N+I      I ++L NL  L L NN L ++P      
Sbjct: 391 NSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPNLVCLKLDNNPLTQIPLDGFQA 450

Query: 448 LRKLKCLDLEENKLESLPN-EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
           +  L+ LDL  N +    + +   L +LQ L L   QL  +P  I +L+NL  L + +N+
Sbjct: 451 VSGLRILDLSGNAVSFREHPKFCHLPQLQELYLSRIQLSEVPEDILNLSNLIILDLNQNS 510

Query: 507 LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS-NLQIMSLDNCPLSQIPSEIVVGG 565
           LQSIP+ I  + +L  L +++N  ++++P EL L    L+++ LD  PL  I   I+  G
Sbjct: 511 LQSIPKSIKNMTSLKHLDISNNN-ISSLPPELGLLEPTLEVLRLDGNPLRSIRRPILERG 569

Query: 566 PSLIIRYLKMQGP 578
              ++ YLK + P
Sbjct: 570 TKAVLNYLKDRLP 582



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 146/449 (32%), Positives = 217/449 (48%), Gaps = 51/449 (11%)

Query: 97  RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLP-SQIGYVTNLTCLGLA 155
           RC +  + +L  S + I+ LP  +   + L +L + GN+L +L  + I   T LT L  +
Sbjct: 135 RCLD--LSDLKASNNQISSLPEDMVNCSKLSKLDVEGNRLTALSENHIASWTMLTELNAS 192

Query: 156 ENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYL 215
           +N L+ LP ++ +L +L  LDL  NK+  +P  +   +SL   YL  N + T+  +I  L
Sbjct: 193 KNMLSGLPQNIGSLSRLIRLDLHQNKILSVPPSIGDCSSLVEFYLGINSLSTLPAEIGDL 252

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
           S L  L +R N+++E P    +LK L  LDL++N L  L  E+GN T L  L L  N L 
Sbjct: 253 SRLGTLDLRSNQLKEYPVGACKLK-LSYLDLSNNSLTGLHPELGNMTTLRKLVLVGNPLR 311

Query: 276 NIPDMLGN-----LINLTRLRLSYNRLESVPETLSK----------CVHLNEFNVEGCAL 320
            +   L N     L+   R RLS N  E+   T +K           +   E ++EG  L
Sbjct: 312 TLRSSLVNGPTAALLKYLRSRLS-NSEETSASTPTKENVIASAARMSISSKELSLEGLNL 370

Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
           S++P  +  S   I  + LS+N     P+   T   S+ ++    N+I   P  I     
Sbjct: 371 SAVPSEVWES-GEITKVNLSKNSIEELPAQLSTSV-SLQTLILSRNKIKDWPGAILKSLP 428

Query: 381 NLSKVNMKDNLLTSLPLDLGTWV-GLTELNLGTN------------------------QI 415
           NL  + + +N LT +PLD    V GL  L+L  N                        Q+
Sbjct: 429 NLVCLKLDNNPLTQIPLDGFQAVSGLRILDLSGNAVSFREHPKFCHLPQLQELYLSRIQL 488

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK-EL 474
           S++ EDI NL NL +L L+ N L+ +P SI N+  LK LD+  N + SLP E+G L+  L
Sbjct: 489 SEVPEDILNLSNLIILDLNQNSLQSIPKSIKNMTSLKHLDISNNNISSLPPELGLLEPTL 548

Query: 475 QRLILQSNQLVSLPRAI---GHLTNLSYL 500
           + L L  N L S+ R I   G    L+YL
Sbjct: 549 EVLRLDGNPLRSIRRPILERGTKAVLNYL 577



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 162/326 (49%), Gaps = 39/326 (11%)

Query: 175 LDLRHNKLNELPMVVYKL-------------TSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           L+L +  L ++P+ VY+                L+ L L  N I  +  D++ L+ L +L
Sbjct: 14  LNLSNRSLKDVPIEVYQCLETTGEGENWWEAVDLQKLILAHNDIAVLREDLKNLACLVVL 73

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++  N + +LP  +GEL  + +LD++ N + ELP++IG+   LV LD   N    +P+ +
Sbjct: 74  NVSHNNLSQLPAAIGELTAMKSLDVSFNSITELPEQIGSAISLVKLDCSSNRFKELPESI 133

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G  ++L+ L+ S N++ S+PE +  C  L++ +VEG  L++L +  ++S T +  +  S+
Sbjct: 134 GRCLDLSDLKASNNQISSLPEDMVNCSKLSKLDVEGNRLTALSENHIASWTMLTELNASK 193

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           N  +  P                         G  SR   L ++++  N + S+P  +G 
Sbjct: 194 NMLSGLPQN----------------------IGSLSR---LIRLDLHQNKILSVPPSIGD 228

Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL 461
              L E  LG N +S L  +I +L  L  L L +N LK+ P     L KL  LDL  N L
Sbjct: 229 CSSLVEFYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKL-KLSYLDLSNNSL 287

Query: 462 ESLPNEIGFLKELQRLILQSNQLVSL 487
             L  E+G +  L++L+L  N L +L
Sbjct: 288 TGLHPELGNMTTLRKLVLVGNPLRTL 313



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 202/430 (46%), Gaps = 46/430 (10%)

Query: 146 VTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRI 205
             +L  L LA N +  L + L NL  L VL++ HN L++LP  + +LT++K L + F   
Sbjct: 44  AVDLQKLILAHNDIAVLREDLKNLACLVVLNVSHNNLSQLPAAIGELTAMKSLDVSF--- 100

Query: 206 KTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLV 265
                               N I ELP ++G   +LV LD + N  +ELP+ IG C  L 
Sbjct: 101 --------------------NSITELPEQIGSAISLVKLDCSSNRFKELPESIGRCLDLS 140

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET-LSKCVHLNEFNVEGCALSSLP 324
            L   +N++ ++P+ + N   L++L +  NRL ++ E  ++    L E N     LS LP
Sbjct: 141 DLKASNNQISSLPEDMVNCSKLSKLDVEGNRLTALSENHIASWTMLTELNASKNMLSGLP 200

Query: 325 DGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
              + SL+ +  + L +NK  + P   G  +     Y      N +  +P  I   ++ L
Sbjct: 201 QN-IGSLSRLIRLDLHQNKILSVPPSIGDCSSLVEFY---LGINSLSTLPAEIGDLSR-L 255

Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
             ++++ N L   P+     + L+ L+L  N ++ L  ++ N+  L  LVL  N L+ L 
Sbjct: 256 GTLDLRSNQLKEYPVG-ACKLKLSYLDLSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLR 314

Query: 443 SSIGN------LRKLKC-LDLEENKLESLPNEIGFLKELQRLILQSNQ-------LVSLP 488
           SS+ N      L+ L+  L   E    S P +   +    R+ + S +       L ++P
Sbjct: 315 SSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISSKELSLEGLNLSAVP 374

Query: 489 RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMS 548
             +     ++ +++ +N+++ +P ++ T  +L TL L+ N   +     L    NL  + 
Sbjct: 375 SEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPNLVCLK 434

Query: 549 LDNCPLSQIP 558
           LDN PL+QIP
Sbjct: 435 LDNNPLTQIP 444


>gi|397493669|ref|XP_003817723.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Pan paniscus]
          Length = 573

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 222/520 (42%), Gaps = 101/520 (19%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +D S  S+T +P  +   T LEE++L  N++  +P +I  + N+  L L +N+L SL  +
Sbjct: 43  IDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPA 102

Query: 166 ------------------------LANLQQLRVLDLRHNKLNELPMVVYK---------- 191
                                   ++ L  LR L L    L E+P+VV K          
Sbjct: 103 LGLLSSLESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVVCKNLHHLELLGL 162

Query: 192 --------------LTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
                          T L+ +YL+ N+ +    ++  L  L ++ + +NKI  +P E+G 
Sbjct: 163 TGNHLKCLPKEIVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPEEIGH 222

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L  L    +A N+L  LP  +  C+ L  LDL HN L +IP  L  L  +T + LS NRL
Sbjct: 223 LTGLQKFYMASNNLPVLPASLCQCSQLSVLDLSHNLLHSIPKSLAELRKMTEIGLSGNRL 282

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
           E VP  +             C  +SL       L  + N  L R +      G      +
Sbjct: 283 EKVPRLI-------------CRWTSL------HLLYLGNTGLHRLR------GSFRCLVN 317

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +  ++   N +D  P  I +  KNL  + + DN +  LP +LG+   L  L L  N+   
Sbjct: 318 LRFLDLSQNHLDHCPLQICA-LKNLEVLGLDDNKIGQLPSELGSLSKLKILGLTGNEFLS 376

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKL---PSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
             E++ +L +LE L +  +   KL   P  I  L+ LK L +E N LE LP  +G +  L
Sbjct: 377 FPEEVLSLASLEKLYIGQDQGFKLTYVPEHIRKLQSLKELYIENNHLEYLPVSLGSMPNL 436

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           + L  + N L  LP AI     L  L + +N L  +PE + +L NL  L L DN      
Sbjct: 437 EVLDCRHNLLKQLPDAICQAQALKELRLEDNLLTHLPENLDSLVNLKVLTLMDN------ 490

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
                             P+ + P E+   G   I +YLK
Sbjct: 491 ------------------PMEEPPKEVCAEGNEAIWKYLK 512


>gi|125562017|gb|EAZ07465.1| hypothetical protein OsI_29720 [Oryza sativa Indica Group]
          Length = 1104

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 140/447 (31%), Positives = 214/447 (47%), Gaps = 43/447 (9%)

Query: 116 LPPSVEKLTHLEELYLYGNKL--ASLPSQIGYVTNLTCLGLAENSLT-SLPDSLANLQQL 172
           +P S+  L  L+ L   GN+     LP +IG  T+LT LGLAE  ++ SLP ++ NL+++
Sbjct: 191 IPASIGNLKKLQVLRAGGNQALKGPLPPEIGGCTDLTMLGLAETGISGSLPATIGNLKKI 250

Query: 173 RVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
           + + +    L   +P  +   T L  LYL  N +                         +
Sbjct: 251 QTIAIYTAMLTGSIPESIGNCTELTSLYLYQNTLSG----------------------GI 288

Query: 232 PPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTR 289
           PP+LG+LK L T+ L  N L   +P EIGNC  LV +DL  NEL   IP   G L NL +
Sbjct: 289 PPQLGQLKKLQTVLLWQNQLVGTIPPEIGNCKELVLIDLSLNELTGPIPRSFGGLPNLQQ 348

Query: 290 LRLSYNRLESV-PETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL---SRNKFT 345
           L+LS N+L  V P  LS C  L +  V+    + L   +      + N+TL    +N+ T
Sbjct: 349 LQLSTNKLTGVIPPELSNCTSLTDIEVDN---NQLTGAIGVDFPRLRNLTLFYAWQNRLT 405

Query: 346 AYPSGGPTQFTSVYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG 404
                   Q   + S++  +N +   IP  +F+       + + ++L   +P ++G    
Sbjct: 406 GGIPASLAQCEGLQSLDLSYNNLTGAIPRELFALQNLTKLLLLSNDLAGFIPPEIGNCTN 465

Query: 405 LTELNLGTNQISK-LSEDIQNLVNLEVLVLSNN-LLKKLPSSIGNLRKLKCLDLEENKLE 462
           L  L L  N++S  +  +I NL NL  L L  N L   LP+++     L+ +DL  N L 
Sbjct: 466 LYRLRLNGNRLSGTIPAEIGNLKNLNFLDLGGNRLTGPLPAAMSGCDNLEFMDLHSNALT 525

Query: 463 -SLPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLEN 519
            +LP ++   + LQ + +  N+L   L   IG L  L+ L++G+N +   IP E+G+ E 
Sbjct: 526 GTLPGDL--PRSLQFVDVSDNRLTGVLGAGIGSLPELTKLNLGKNRISGGIPPELGSCEK 583

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQI 546
           L  L L DN     IP EL     L+I
Sbjct: 584 LQLLDLGDNALSGGIPPELGKLPFLEI 610



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 190/403 (47%), Gaps = 15/403 (3%)

Query: 161 SLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNL 218
           ++P  L +L +L  LDL  N+L   +P  + +L  L+ L L  N ++   PD I  L+ L
Sbjct: 118 AIPKELGDLAELSTLDLTKNQLTGAIPAELCRLRKLQSLALNSNSLRGAIPDAIGNLTGL 177

Query: 219 SMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHL--EELPKEIGNCTMLVTLDLQHNELV 275
           + L++ DN++   +P  +G LK L  L    N      LP EIG CT L  L L    + 
Sbjct: 178 TSLTLYDNELSGAIPASIGNLKKLQVLRAGGNQALKGPLPPEIGGCTDLTMLGLAETGIS 237

Query: 276 N-IPDMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
             +P  +GNL  +  + +    L  S+PE++  C  L    +    LS      L  L  
Sbjct: 238 GSLPATIGNLKKIQTIAIYTAMLTGSIPESIGNCTELTSLYLYQNTLSGGIPPQLGQLKK 297

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLL 392
           +  + L +N+              +  I+   N++   IP   F    NL ++ +  N L
Sbjct: 298 LQTVLLWQNQLVGTIPPEIGNCKELVLIDLSLNELTGPIPRS-FGGLPNLQQLQLSTNKL 356

Query: 393 TS-LPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVL-VLSNNLLKKLPSSIGNLR 449
           T  +P +L     LT++ +  NQ++  +  D   L NL +     N L   +P+S+    
Sbjct: 357 TGVIPPELSNCTSLTDIEVDNNQLTGAIGVDFPRLRNLTLFYAWQNRLTGGIPASLAQCE 416

Query: 450 KLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNL 507
            L+ LDL  N L  ++P E+  L+ L +L+L SN L   +P  IG+ TNL  L +  N L
Sbjct: 417 GLQSLDLSYNNLTGAIPRELFALQNLTKLLLLSNDLAGFIPPEIGNCTNLYRLRLNGNRL 476

Query: 508 Q-SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
             +IP EIG L+NL+ L L  N     +P  ++ C NL+ M L
Sbjct: 477 SGTIPAEIGNLKNLNFLDLGGNRLTGPLPAAMSGCDNLEFMDL 519



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 184/399 (46%), Gaps = 70/399 (17%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
           +PP + +L  L+ + L+ N+L  ++P +IG    L  + L+ N LT  +P S   L  L+
Sbjct: 288 IPPQLGQLKKLQTVLLWQNQLVGTIPPEIGNCKELVLIDLSLNELTGPIPRSFGGLPNLQ 347

Query: 174 VLDLRHNKLNE-LPMVVYKLTSLKILYLRFNRI-KTVHPDIQYLSNLSMLSMRDNKIRE- 230
            L L  NKL   +P  +   TSL  + +  N++   +  D   L NL++     N++   
Sbjct: 348 QLQLSTNKLTGVIPPELSNCTSLTDIEVDNNQLTGAIGVDFPRLRNLTLFYAWQNRLTGG 407

Query: 231 LPPELGELKNLVTLDLAHNHLEE-------------------------LPKEIGNCTMLV 265
           +P  L + + L +LDL++N+L                           +P EIGNCT L 
Sbjct: 408 IPASLAQCEGLQSLDLSYNNLTGAIPRELFALQNLTKLLLLSNDLAGFIPPEIGNCTNLY 467

Query: 266 TLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALS-S 322
            L L  N L   IP  +GNL NL  L L  NRL   +P  +S C +L   ++   AL+ +
Sbjct: 468 RLRLNGNRLSGTIPAEIGNLKNLNFLDLGGNRLTGPLPAAMSGCDNLEFMDLHSNALTGT 527

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LP  L  SL  ++   +S N+ T     G                I  +P         L
Sbjct: 528 LPGDLPRSLQFVD---VSDNRLTGVLGAG----------------IGSLP--------EL 560

Query: 383 SKVNMKDNLLTS-LPLDLGTWVGLTELNLGTNQISK-LSEDIQNLVNLEV-LVLS-NNLL 438
           +K+N+  N ++  +P +LG+   L  L+LG N +S  +  ++  L  LE+ L LS N L 
Sbjct: 561 TKLNLGKNRISGGIPPELGSCEKLQLLDLGDNALSGGIPPELGKLPFLEISLNLSCNRLS 620

Query: 439 KKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
            ++PS    L KL CLD+  N+L       G L+ L RL
Sbjct: 621 GEIPSQFAGLDKLGCLDVSYNQLS------GSLEPLARL 653



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 121/245 (49%), Gaps = 13/245 (5%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
           +PP +   T+L  L L GN+L  ++P++IG + NL  L L  N LT  LP +++    L 
Sbjct: 456 IPPEIGNCTNLYRLRLNGNRLSGTIPAEIGNLKNLNFLDLGGNRLTGPLPAAMSGCDNLE 515

Query: 174 VLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTV-HPDIQYLSNLSMLSMRDNKIRE- 230
            +DL  N L   LP  + +  SL+ + +  NR+  V    I  L  L+ L++  N+I   
Sbjct: 516 FMDLHSNALTGTLPGDLPR--SLQFVDVSDNRLTGVLGAGIGSLPELTKLNLGKNRISGG 573

Query: 231 LPPELGELKNLVTLDLAHNHLEE-LPKEIGNCTML-VTLDLQHNELVN-IPDMLGNLINL 287
           +PPELG  + L  LDL  N L   +P E+G    L ++L+L  N L   IP     L  L
Sbjct: 574 IPPELGSCEKLQLLDLGDNALSGGIPPELGKLPFLEISLNLSCNRLSGEIPSQFAGLDKL 633

Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS-LPDGLLSSLTSINNITLSRNKFTA 346
             L +SYN+L    E L++  +L   N+   A S  LPD        IN+I  + N    
Sbjct: 634 GCLDVSYNQLSGSLEPLARLENLVTLNISYNAFSGELPDTAFFQKLPINDI--AGNHLLV 691

Query: 347 YPSGG 351
             SGG
Sbjct: 692 VGSGG 696



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 24/123 (19%)

Query: 427 NLEVLVLSN-NLLKKLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQL 484
           +L+ LVLS  NL   +P  +G+L +L  LDL +N+L  ++P E+  L++LQ L L SN L
Sbjct: 104 SLKTLVLSGTNLTGAIPKELGDLAELSTLDLTKNQLTGAIPAELCRLRKLQSLALNSNSL 163

Query: 485 VSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
                                   +IP+ IG L  L +L L DN     IP  +     L
Sbjct: 164 RG----------------------AIPDAIGNLTGLTSLTLYDNELSGAIPASIGNLKKL 201

Query: 545 QIM 547
           Q++
Sbjct: 202 QVL 204



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)

Query: 106 LDLSKSSITH-LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-L 162
           +D+S + +T  L   +  L  L +L L  N++   +P ++G    L  L L +N+L+  +
Sbjct: 539 VDVSDNRLTGVLGAGIGSLPELTKLNLGKNRISGGIPPELGSCEKLQLLDLGDNALSGGI 598

Query: 163 PDSLANLQQLRV-LDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           P  L  L  L + L+L  N+L  E+P     L  L  L + +N++      +  L NL  
Sbjct: 599 PPELGKLPFLEISLNLSCNRLSGEIPSQFAGLDKLGCLDVSYNQLSGSLEPLARLENLVT 658

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHL 251
           L++  N      P+    + L   D+A NHL
Sbjct: 659 LNISYNAFSGELPDTAFFQKLPINDIAGNHL 689


>gi|301764090|ref|XP_002917472.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and IQ
           domain-containing protein 4-like [Ailuropoda
           melanoleuca]
          Length = 560

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 225/508 (44%), Gaps = 61/508 (12%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +D S  S+T +P  + +L  LEE +L  N++ ++P  I  + N+  L L EN L +L   
Sbjct: 30  IDASNQSLTTIPSQILELEELEEAHLENNRIEAIPRGIQRLKNVRILYLNENKLRALCPE 89

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF----------------------- 202
           L  L  L  LDL HN L    + V            +                       
Sbjct: 90  LGRLSSLEGLDLSHNPLLRSSLPVLGGLRRLRELRLYHTGLAEIPVGLCKLLHHLELLGL 149

Query: 203 --NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGN 260
             N +K++  +I+  + L  + ++ N+    PPEL  L +L  +DL  N L  +P+EIGN
Sbjct: 150 SGNDLKSLPKEIENQTKLREIYLKQNQFEVFPPELCVLYDLEVIDLDKNRLTAVPEEIGN 209

Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
            T L    + HN L  +P+ LG     + L LSYNRL S+P TL++   + E  + G  L
Sbjct: 210 LTRLQKFYVAHNSLPVLPESLGRCSRXSVLDLSYNRLHSIPHTLAELTGMTEIGLSGNPL 269

Query: 321 SSLPDGLLSSLTSINNITLS----RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIF 376
             +P  L+   TS++ + L     R    ++   G  +F     ++   N +++ P  + 
Sbjct: 270 EKVPR-LICRWTSVHLLYLCNTGLRGLRRSFRRLGNLRF-----LDLSQNHLERCPSEV- 322

Query: 377 SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
           S  K+L  + + DN +  LP D G+   L  L L  NQ     E+I  L +LE L +  +
Sbjct: 323 SALKHLEILALDDNKIWQLPSDFGSLSKLKMLGLTGNQFLSFPEEILPLESLEKLYIGQD 382

Query: 437 LLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTN 496
                               +  K  SLP  I  L+ L+ L +++N L  LP ++G + N
Sbjct: 383 --------------------QGAKFTSLPEHISKLQSLKELYIENNHLEYLPTSLGSMPN 422

Query: 497 LSYLSVGENNLQSIPEEIGTLENLHTLYLNDN--TCLNNIPFELALCSNLQIMSLDNCPL 554
           L  L    N L+ +P+ I   + L  L L DN  TCL   P  L    NL++++L + PL
Sbjct: 423 LEILDCRHNRLKQLPDSICQAQALKELLLEDNLITCL---PENLDSLVNLKVLTLVDNPL 479

Query: 555 SQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
              P E+   G   I    K +   + M
Sbjct: 480 EDPPREVCAEGIQAIWANFKKKRNMKIM 507



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 3/209 (1%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLA 155
           L C+  ++  L L  + +  L  S  +L +L  L L  N L   PS++  + +L  L L 
Sbjct: 275 LICRWTSVHLLYLCNTGLRGLRRSFRRLGNLRFLDLSQNHLERCPSEVSALKHLEILALD 334

Query: 156 ENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYL---RFNRIKTVHPDI 212
           +N +  LP    +L +L++L L  N+    P  +  L SL+ LY+   +  +  ++   I
Sbjct: 335 DNKIWQLPSDFGSLSKLKMLGLTGNQFLSFPEEILPLESLEKLYIGQDQGAKFTSLPEHI 394

Query: 213 QYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN 272
             L +L  L + +N +  LP  LG + NL  LD  HN L++LP  I     L  L L+ N
Sbjct: 395 SKLQSLKELYIENNHLEYLPTSLGSMPNLEILDCRHNRLKQLPDSICQAQALKELLLEDN 454

Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVP 301
            +  +P+ L +L+NL  L L  N LE  P
Sbjct: 455 LITCLPENLDSLVNLKVLTLVDNPLEDPP 483


>gi|359751215|emb|CCF03510.1| receptor kinase [Arabidopsis lyrata]
          Length = 1162

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 163/486 (33%), Positives = 241/486 (49%), Gaps = 51/486 (10%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-L 162
           LDL+ ++ T  +P  + KLT L EL LY N    S+PS+I  + NL  L L  N LT  +
Sbjct: 101 LDLTSNNFTGEIPAEIGKLTELNELSLYLNYFSGSIPSEIWELKNLMSLDLRNNLLTGDV 160

Query: 163 PDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSM 220
           P ++   + L V+ + +N L   +P  +  L  L++     NR+    P  +  L NL+ 
Sbjct: 161 PKAICKTRTLVVVGVGNNNLTGNIPDCLGDLVHLEVFVADINRLSGSIPVTVGTLVNLTN 220

Query: 221 LSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-I 277
           L +  N++   +P E+G L N+  L L  N LE E+P EIGNCT L+ L+L  N+L   I
Sbjct: 221 LDLSGNQLTGRIPREIGNLLNIQALVLFDNLLEGEIPAEIGNCTSLIDLELYGNQLTGRI 280

Query: 278 PDMLGNLINLTRLRLSYNRL-ESVPETLSKCVHLNEFNV-EGCALSSLPDGLLSSLTSIN 335
           P  LGNL+ L  LRL  N L  S+P +L +   L    + E   +  +P+  + SL S+ 
Sbjct: 281 PAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLRYLGLSENQLVGPIPEE-IGSLKSLQ 339

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI-DKIPY--GIFSRAKNLSKVNMKDNLL 392
            +TL  N  T       T   ++  +    N I  ++P   G+ +  +NLS     DN L
Sbjct: 340 VLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGELPADLGLLTNLRNLSA---HDNHL 396

Query: 393 TS-------------------------LPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLV 426
           T                          +P  LG  + LT L+LG N+ + ++ +DI N  
Sbjct: 397 TGPIPSSISNCTGLKLLDLSFNKMTGKIPRGLGR-LNLTALSLGPNRFTGEIPDDIFNCS 455

Query: 427 NLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRLILQSNQL 484
           N+E L L+ NNL   L   IG L+KL+   +  N L   +P EIG L+EL  L L SN+ 
Sbjct: 456 NMETLNLAGNNLTGTLKPLIGKLKKLRIFQVSSNSLTGKIPGEIGNLRELILLYLHSNRF 515

Query: 485 V-SLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
             ++PR I +LT L  L +  N+L+  IPEE+  +  L  L L+ N     IP   AL S
Sbjct: 516 TGTIPREISNLTLLQGLGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIP---ALFS 572

Query: 543 NLQIMS 548
            LQ ++
Sbjct: 573 KLQSLT 578



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 130/398 (32%), Positives = 190/398 (47%), Gaps = 80/398 (20%)

Query: 162 LPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           L  ++ANL  L+VLDL  N    E+P  + KLT L  L L  N          Y S    
Sbjct: 88  LSPAIANLTYLQVLDLTSNNFTGEIPAEIGKLTELNELSLYLN----------YFSG--- 134

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELV-NIP 278
                     +P E+ ELKNL++LDL +N L  ++PK I     LV + + +N L  NIP
Sbjct: 135 ---------SIPSEIWELKNLMSLDLRNNLLTGDVPKAICKTRTLVVVGVGNNNLTGNIP 185

Query: 279 DMLGNLINLTRLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNI 337
           D LG+L++L       NRL  S+P T+   V+L                         N+
Sbjct: 186 DCLGDLVHLEVFVADINRLSGSIPVTVGTLVNL------------------------TNL 221

Query: 338 TLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS-LP 396
            LS N+ T                        +IP  I     N+  + + DNLL   +P
Sbjct: 222 DLSGNQLTG-----------------------RIPREI-GNLLNIQALVLFDNLLEGEIP 257

Query: 397 LDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVL-SNNLLKKLPSSIGNLRKLKCL 454
            ++G    L +L L  NQ++ ++  ++ NLV LE L L  NNL   LPSS+  L +L+ L
Sbjct: 258 AEIGNCTSLIDLELYGNQLTGRIPAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLRYL 317

Query: 455 DLEENKLES-LPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IP 511
            L EN+L   +P EIG LK LQ L L SN L    P++I +L NL+ +++G N +   +P
Sbjct: 318 GLSENQLVGPIPEEIGSLKSLQVLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGELP 377

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
            ++G L NL  L  +DN     IP  ++ C+ L+++ L
Sbjct: 378 ADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLKLLDL 415



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 219/473 (46%), Gaps = 43/473 (9%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSL-TSLPDSLANLQQLR 173
           +P  +   T L +L LYGN+L   +P+++G +  L  L L  N+L +SLP SL  L +LR
Sbjct: 256 IPAEIGNCTSLIDLELYGNQLTGRIPAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLR 315

Query: 174 VLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIR-E 230
            L L  N+L   +P  +  L SL++L L  N +    P  I  L NL++++M  N I  E
Sbjct: 316 YLGLSENQLVGPIPEEIGSLKSLQVLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGE 375

Query: 231 LPPELGELKNLVTLDLAHNHLEE-LPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLT 288
           LP +LG L NL  L    NHL   +P  I NCT L  LDL  N++   IP  LG L NLT
Sbjct: 376 LPADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLKLLDLSFNKMTGKIPRGLGRL-NLT 434

Query: 289 RLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            L L  NR    +P+ +  C ++   N+ G  L+     L+  L  +    +S N  T  
Sbjct: 435 ALSLGPNRFTGEIPDDIFNCSNMETLNLAGNNLTGTLKPLIGKLKKLRIFQVSSNSLTG- 493

Query: 348 PSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLT 406
                                 KIP G     + L  + +  N  T ++P ++     L 
Sbjct: 494 ----------------------KIP-GEIGNLRELILLYLHSNRFTGTIPREISNLTLLQ 530

Query: 407 ELNLGTNQI-SKLSEDIQNLVNLEVLVLSNNLLKK-LPSSIGNLRKLKCLDLEENKLE-S 463
            L L  N +   + E++ +++ L  L LS+N     +P+    L+ L  L L  NK   S
Sbjct: 531 GLGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIPALFSKLQSLTYLGLHGNKFNGS 590

Query: 464 LPNEIGFLKELQRLILQSNQLV-SLPRAI-GHLTNLS-YLSVGENNLQ-SIPEEIGTLEN 519
           +P  +  L  L    +  N L  ++P  +   + N+  YL+   N L  +I  E+G LE 
Sbjct: 591 IPASLKSLSLLNTFDISDNLLTGTIPEELLSSMKNMQLYLNFSNNFLTGTISNELGKLEM 650

Query: 520 LHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS-QIPSEIV-VGGPSLII 570
           +  +  ++N    +IP  L  C N+  +      LS QIP E+   GG  +II
Sbjct: 651 VQEIDFSNNLFSGSIPRSLKACKNVFTLDFSRNNLSGQIPDEVFHQGGMDMII 703



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 195/431 (45%), Gaps = 65/431 (15%)

Query: 116 LPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
            P S+  L +L  + +  N ++  LP+ +G +TNL  L   +N LT  +P S++N   L+
Sbjct: 352 FPQSITNLRNLTVMTMGFNYISGELPADLGLLTNLRNLSAHDNHLTGPIPSSISNCTGLK 411

Query: 174 VLDLRHNKL------------------------NELPMVVYKLTSLKILYLRFNRI-KTV 208
           +LDL  NK+                         E+P  ++  ++++ L L  N +  T+
Sbjct: 412 LLDLSFNKMTGKIPRGLGRLNLTALSLGPNRFTGEIPDDIFNCSNMETLNLAGNNLTGTL 471

Query: 209 HPDIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVT 266
            P I  L  L +  +  N +  ++P E+G L+ L+ L L  N     +P+EI N T+L  
Sbjct: 472 KPLIGKLKKLRIFQVSSNSLTGKIPGEIGNLRELILLYLHSNRFTGTIPREISNLTLLQG 531

Query: 267 LDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE-------------------------SV 300
           L L  N+L   IP+ + +++ L+ L LS N+                           S+
Sbjct: 532 LGLHRNDLEGPIPEEMFDMMQLSELELSSNKFSGPIPALFSKLQSLTYLGLHGNKFNGSI 591

Query: 301 PETLSKCVHLNEFNVEGCALS-SLPDGLLSSLTSIN-NITLSRNKFTAYPSGGPTQFTSV 358
           P +L     LN F++    L+ ++P+ LLSS+ ++   +  S N  T   S    +   V
Sbjct: 592 PASLKSLSLLNTFDISDNLLTGTIPEELLSSMKNMQLYLNFSNNFLTGTISNELGKLEMV 651

Query: 359 YSINFEHNQI-DKIPYGIFSRAKNLSKVNM-KDNLLTSLPLDL---GTWVGLTELNLGTN 413
             I+F +N     IP  +    KN+  ++  ++NL   +P ++   G    +  LNL  N
Sbjct: 652 QEIDFSNNLFSGSIPRSL-KACKNVFTLDFSRNNLSGQIPDEVFHQGGMDMIISLNLSRN 710

Query: 414 QISK-LSEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
            +S  + E   NL +L  L LS NNL  ++P S+ NL  LK L L  N L+    E G  
Sbjct: 711 SLSGGIPEGFGNLTHLVSLDLSSNNLTGEIPESLVNLSTLKHLKLASNHLKGHVPETGVF 770

Query: 472 KELQRLILQSN 482
           K +    L  N
Sbjct: 771 KNINASDLMGN 781



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 155/341 (45%), Gaps = 58/341 (17%)

Query: 231 LPPELGELKNLVTLDLAHNHLE-ELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLT 288
           L P +  L  L  LDL  N+   E+P EIG  T L  L L  N     IP  +  L NL 
Sbjct: 88  LSPAIANLTYLQVLDLTSNNFTGEIPAEIGKLTELNELSLYLNYFSGSIPSEIWELKNLM 147

Query: 289 RLRLSYNRLES-VPETLSKCVHLNEFNVEGCALSS-LPDGLLSSLTSINNITLSRNKFTA 346
            L L  N L   VP+ + K   L    V    L+  +PD  L  L  +       N+ + 
Sbjct: 148 SLDLRNNLLTGDVPKAICKTRTLVVVGVGNNNLTGNIPD-CLGDLVHLEVFVADINRLSG 206

Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
                                                          S+P+ +GT V LT
Sbjct: 207 -----------------------------------------------SIPVTVGTLVNLT 219

Query: 407 ELNLGTNQIS-KLSEDIQNLVNLEVLVLSNNLLK-KLPSSIGNLRKLKCLDLEENKLES- 463
            L+L  NQ++ ++  +I NL+N++ LVL +NLL+ ++P+ IGN   L  L+L  N+L   
Sbjct: 220 NLDLSGNQLTGRIPREIGNLLNIQALVLFDNLLEGEIPAEIGNCTSLIDLELYGNQLTGR 279

Query: 464 LPNEIGFLKELQRLILQSNQL-VSLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLH 521
           +P E+G L +L+ L L  N L  SLP ++  LT L YL + EN L   IPEEIG+L++L 
Sbjct: 280 IPAELGNLVQLEALRLYGNNLNSSLPSSLFRLTRLRYLGLSENQLVGPIPEEIGSLKSLQ 339

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIMSLD-NCPLSQIPSEI 561
            L L+ N      P  +    NL +M++  N    ++P+++
Sbjct: 340 VLTLHSNNLTGEFPQSITNLRNLTVMTMGFNYISGELPADL 380



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 106/215 (49%), Gaps = 15/215 (6%)

Query: 358 VYSINFEHNQIDKIPYGIFSRA-KNLSKVNMKD----NLLTSLPLDLGTWVGLTELNLGT 412
           V S++    Q++    G+ S A  NL+ + + D    N    +P ++G    L EL+L  
Sbjct: 74  VVSVSLLEKQLE----GVLSPAIANLTYLQVLDLTSNNFTGEIPAEIGKLTELNELSLYL 129

Query: 413 NQIS-KLSEDIQNLVNLEVLVLSNNLL-KKLPSSIGNLRKLKCLDLEENKLES-LPNEIG 469
           N  S  +  +I  L NL  L L NNLL   +P +I   R L  + +  N L   +P+ +G
Sbjct: 130 NYFSGSIPSEIWELKNLMSLDLRNNLLTGDVPKAICKTRTLVVVGVGNNNLTGNIPDCLG 189

Query: 470 FLKELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLND 527
            L  L+  +   N+L  S+P  +G L NL+ L +  N L   IP EIG L N+  L L D
Sbjct: 190 DLVHLEVFVADINRLSGSIPVTVGTLVNLTNLDLSGNQLTGRIPREIGNLLNIQALVLFD 249

Query: 528 NTCLNNIPFELALCSNLQIMSL-DNCPLSQIPSEI 561
           N     IP E+  C++L  + L  N    +IP+E+
Sbjct: 250 NLLEGEIPAEIGNCTSLIDLELYGNQLTGRIPAEL 284


>gi|414885940|tpg|DAA61954.1| TPA: putative leucine-rich repeat receptor protein kinase family
           protein [Zea mays]
          Length = 1138

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 145/455 (31%), Positives = 220/455 (48%), Gaps = 59/455 (12%)

Query: 116 LPPSVEKLTHLEELYLYGNKL--ASLPSQIGYVTNLTCLGLAENSLT-SLPDSLANLQQL 172
           +PPS+  L  L+ L   GN+     LP +IG  T+LT LGLAE  ++ SLP+++  L+++
Sbjct: 236 IPPSIGNLKKLQVLRAGGNQGMKGPLPQEIGGCTDLTMLGLAETGVSGSLPETIGQLKKI 295

Query: 173 RVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
           + + +    L   +P  +   T L  LYL  N +                         +
Sbjct: 296 QTIAIYTTLLSGRIPESIGNCTQLTSLYLYQNSLSG----------------------PI 333

Query: 232 PPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTR 289
           PP+LG LK L TL L  N L   +P E+G C  L  +DL  N L   IP  LG L NL +
Sbjct: 334 PPQLGYLKKLQTLLLWQNQLVGAIPPELGQCKELTLIDLSLNSLTGSIPASLGGLPNLQQ 393

Query: 290 LRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN-----NITL---S 340
           L+LS N+L  ++P  LS C  L +  V+        + LLS   SI+     N+TL    
Sbjct: 394 LQLSTNQLTGTIPPELSNCTSLTDIEVD--------NNLLSGAISIDFPRLRNLTLFYAW 445

Query: 341 RNKFTAYPSGGPTQFT---SVYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
           +N+ T    G PT      S+ +++  +N +   IP  +F        + + + L   +P
Sbjct: 446 KNRLTG---GVPTSLAEAPSLQAVDLSYNNLTGPIPKALFGLQNLTKLLLLNNELTGLIP 502

Query: 397 LDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCL 454
            ++G    L  L L  N++S  +  +I NL NL  L +S N+L+  +P++I     L+ L
Sbjct: 503 SEIGNCTNLYRLRLNGNRLSGAIPAEIGNLKNLNFLDMSENHLVGPVPAAISGCASLEFL 562

Query: 455 DLEENKLE-SLPNEIGFLKELQRLILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IP 511
           DL  N L  +LP+ +   + LQ + +  NQL   L  +IG L  L+ L +G N L   IP
Sbjct: 563 DLHSNALSGALPDTL--PRSLQLIDVSDNQLTGPLSSSIGSLPELTKLYMGNNRLTGGIP 620

Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQI 546
            E+G+ E L  L L  N     IP EL +  +L+I
Sbjct: 621 PELGSCEKLQLLDLGGNAFSGGIPSELGMLPSLEI 655



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 199/424 (46%), Gaps = 14/424 (3%)

Query: 146 VTNLTCLGLAENSLT-SLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFN 203
             +L  L L+  +LT ++P  +    +L  LDL  N+L   +P  + +L  L+ L L  N
Sbjct: 147 AASLKTLELSGTNLTGAIPKEIGEYGELTTLDLSKNQLTGAVPAELCRLAKLESLALNSN 206

Query: 204 RIKTVHPD-IQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLEE--LPKEIG 259
            ++   PD I  L++L+ L++ DN++   +PP +G LK L  L    N   +  LP+EIG
Sbjct: 207 SLRGAIPDDIGNLTSLTYLTLYDNELSGPIPPSIGNLKKLQVLRAGGNQGMKGPLPQEIG 266

Query: 260 NCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEG 317
            CT L  L L    +   +P+ +G L  +  + +    L   +PE++  C  L    +  
Sbjct: 267 GCTDLTMLGLAETGVSGSLPETIGQLKKIQTIAIYTTLLSGRIPESIGNCTQLTSLYLYQ 326

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
            +LS      L  L  +  + L +N+          Q   +  I+   N +         
Sbjct: 327 NSLSGPIPPQLGYLKKLQTLLLWQNQLVGAIPPELGQCKELTLIDLSLNSLTGSIPASLG 386

Query: 378 RAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVL-VLS 434
              NL ++ +  N LT ++P +L     LT++ +  N +S  +S D   L NL +     
Sbjct: 387 GLPNLQQLQLSTNQLTGTIPPELSNCTSLTDIEVDNNLLSGAISIDFPRLRNLTLFYAWK 446

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEI-GFLKELQRLILQSNQLVSLPRAIG 492
           N L   +P+S+     L+ +DL  N L   +P  + G     + L+L +     +P  IG
Sbjct: 447 NRLTGGVPTSLAEAPSLQAVDLSYNNLTGPIPKALFGLQNLTKLLLLNNELTGLIPSEIG 506

Query: 493 HLTNLSYLSVGENNLQ-SIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
           + TNL  L +  N L  +IP EIG L+NL+ L +++N  +  +P  ++ C++L+ + L +
Sbjct: 507 NCTNLYRLRLNGNRLSGAIPAEIGNLKNLNFLDMSENHLVGPVPAAISGCASLEFLDLHS 566

Query: 552 CPLS 555
             LS
Sbjct: 567 NALS 570



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 64/385 (16%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLT-SLPDSLANLQQLR 173
           +PP +  L  L+ L L+ N+L  ++P ++G    LT + L+ NSLT S+P SL  L  L+
Sbjct: 333 IPPQLGYLKKLQTLLLWQNQLVGAIPPELGQCKELTLIDLSLNSLTGSIPASLGGLPNLQ 392

Query: 174 VLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIK-TVHPDIQYLSNLSMLSMRDNKIRE- 230
            L L  N+L   +P  +   TSL  + +  N +   +  D   L NL++     N++   
Sbjct: 393 QLQLSTNQLTGTIPPELSNCTSLTDIEVDNNLLSGAISIDFPRLRNLTLFYAWKNRLTGG 452

Query: 231 LPPELGELKNLVTLDLAHNHLE-------------------------ELPKEIGNCTMLV 265
           +P  L E  +L  +DL++N+L                           +P EIGNCT L 
Sbjct: 453 VPTSLAEAPSLQAVDLSYNNLTGPIPKALFGLQNLTKLLLLNNELTGLIPSEIGNCTNLY 512

Query: 266 TLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEGCALS-S 322
            L L  N L   IP  +GNL NL  L +S N L   VP  +S C  L   ++   ALS +
Sbjct: 513 RLRLNGNRLSGAIPAEIGNLKNLNFLDMSENHLVGPVPAAISGCASLEFLDLHSNALSGA 572

Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
           LPD L  SL  I+   +S N+ T     GP             + I  +P         L
Sbjct: 573 LPDTLPRSLQLID---VSDNQLT-----GPLS-----------SSIGSLP--------EL 605

Query: 383 SKVNMKDNLLTS-LPLDLGTWVGLTELNLGTNQISK-LSEDIQNLVNLEV-LVLS-NNLL 438
           +K+ M +N LT  +P +LG+   L  L+LG N  S  +  ++  L +LE+ L LS N L 
Sbjct: 606 TKLYMGNNRLTGGIPPELGSCEKLQLLDLGGNAFSGGIPSELGMLPSLEISLNLSCNRLS 665

Query: 439 KKLPSSIGNLRKLKCLDLEENKLES 463
            ++PS    L KL  LDL  N+L  
Sbjct: 666 GEIPSQFAGLDKLGSLDLSHNELSG 690



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 29/209 (13%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
           +P  +   T+L  L L GN+L  ++P++IG + NL  L ++EN L   +P +++    L 
Sbjct: 501 IPSEIGNCTNLYRLRLNGNRLSGAIPAEIGNLKNLNFLDMSENHLVGPVPAAISGCASLE 560

Query: 174 VLDLRHNKL-----------------------NELPMVVYKLTSLKILYLRFNRI-KTVH 209
            LDL  N L                         L   +  L  L  LY+  NR+   + 
Sbjct: 561 FLDLHSNALSGALPDTLPRSLQLIDVSDNQLTGPLSSSIGSLPELTKLYMGNNRLTGGIP 620

Query: 210 PDIQYLSNLSMLSMRDNKIRE-LPPELGELKNL-VTLDLAHNHLE-ELPKEIGNCTMLVT 266
           P++     L +L +  N     +P ELG L +L ++L+L+ N L  E+P +      L +
Sbjct: 621 PELGSCEKLQLLDLGGNAFSGGIPSELGMLPSLEISLNLSCNRLSGEIPSQFAGLDKLGS 680

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYN 295
           LDL HNEL    + L  L NL  L +SYN
Sbjct: 681 LDLSHNELSGSLEPLAALQNLVTLNISYN 709



 Score = 38.9 bits (89), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 3/115 (2%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNL-TCLGLAENSLTS-LPDSLANLQQL 172
           +PP +     L+ L L GN     +PS++G + +L   L L+ N L+  +P   A L +L
Sbjct: 619 IPPELGSCEKLQLLDLGGNAFSGGIPSELGMLPSLEISLNLSCNRLSGEIPSQFAGLDKL 678

Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
             LDL HN+L+     +  L +L  L + +N      P+  +   L +  +  N+
Sbjct: 679 GSLDLSHNELSGSLEPLAALQNLVTLNISYNTFSGELPNTPFFQKLPLSDLAGNR 733


>gi|22327871|ref|NP_200415.2| leucine-rich receptor-like protein kinase [Arabidopsis thaliana]
 gi|18175662|gb|AAL59906.1| putative receptor protein kinase [Arabidopsis thaliana]
 gi|224589725|gb|ACN59394.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis
           thaliana]
 gi|332009330|gb|AED96713.1| leucine-rich receptor-like protein kinase [Arabidopsis thaliana]
          Length = 953

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 145/446 (32%), Positives = 217/446 (48%), Gaps = 39/446 (8%)

Query: 115 HLPPSVEKLTHLEELYLYGNK--LASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQ 171
            +P ++ +L +LE     GNK     LP +IG   +L  LGLAE SL+  LP S+ NL++
Sbjct: 183 EIPRTIGELKNLEIFRAGGNKNLRGELPWEIGNCESLVTLGLAETSLSGRLPASIGNLKK 242

Query: 172 LRVLDLRHNKLNE-LPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           ++ + L  + L+  +P  +   T L+ LYL  N I                         
Sbjct: 243 VQTIALYTSLLSGPIPDEIGNCTELQNLYLYQNSISG----------------------S 280

Query: 231 LPPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNELV-NIPDMLGNLINLT 288
           +P  +G LK L +L L  N+L  ++P E+G C  L  +DL  N L  NIP   GNL NL 
Sbjct: 281 IPVSMGRLKKLQSLLLWQNNLVGKIPTELGTCPELFLVDLSENLLTGNIPRSFGNLPNLQ 340

Query: 289 RLRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAY 347
            L+LS N+L  ++PE L+ C  L    ++   +S     L+  LTS+      +N+ T  
Sbjct: 341 ELQLSVNQLSGTIPEELANCTKLTHLEIDNNQISGEIPPLIGKLTSLTMFFAWQNQLTGI 400

Query: 348 PSGGPTQFTSVYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLLTS-LPLDLGTWVGL 405
                +Q   + +I+  +N +   IP GIF   +NL+K+ +  N L+  +P D+G    L
Sbjct: 401 IPESLSQCQELQAIDLSYNNLSGSIPNGIF-EIRNLTKLLLLSNYLSGFIPPDIGNCTNL 459

Query: 406 TELNLGTNQISK-LSEDIQNLVNLEVLVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLES 463
             L L  N+++  +  +I NL NL  + +S N L+  +P  I     L+ +DL  N L  
Sbjct: 460 YRLRLNGNRLAGNIPAEIGNLKNLNFIDISENRLIGNIPPEISGCTSLEFVDLHSNGLTG 519

Query: 464 -LPNEIGFLKELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENL 520
            LP  +   K LQ + L  N L  SLP  IG LT L+ L++ +N     IP EI +  +L
Sbjct: 520 GLPGTLP--KSLQFIDLSDNSLTGSLPTGIGSLTELTKLNLAKNRFSGEIPREISSCRSL 577

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQI 546
             L L DN     IP EL    +L I
Sbjct: 578 QLLNLGDNGFTGEIPNELGRIPSLAI 603



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 138/422 (32%), Positives = 219/422 (51%), Gaps = 22/422 (5%)

Query: 146 VTNLTCLGLAENSLT-SLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFN 203
           + +LT L L   +LT S+P  L +L +L VLDL  N L  E+P+ ++KL  LKIL L  N
Sbjct: 95  IKSLTLLSLTSVNLTGSIPKELGDLSELEVLDLADNSLSGEIPVDIFKLKKLKILSLNTN 154

Query: 204 RIKTVHP-DIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNH--LEELPKEIG 259
            ++ V P ++  L NL  L++ DNK+  E+P  +GELKNL       N     ELP EIG
Sbjct: 155 NLEGVIPSELGNLVNLIELTLFDNKLAGEIPRTIGELKNLEIFRAGGNKNLRGELPWEIG 214

Query: 260 NCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLES-VPETLSKCVHLNEFNVEG 317
           NC  LVTL L    L   +P  +GNL  +  + L  + L   +P+ +  C  L    +  
Sbjct: 215 NCESLVTLGLAETSLSGRLPASIGNLKKVQTIALYTSLLSGPIPDEIGNCTELQNLYLYQ 274

Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS---VYSINFEHNQI-DKIPY 373
            ++S      +  L  + ++ L +N         PT+  +   ++ ++   N +   IP 
Sbjct: 275 NSISGSIPVSMGRLKKLQSLLLWQNNLVGKI---PTELGTCPELFLVDLSENLLTGNIPR 331

Query: 374 GIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVL 431
             F    NL ++ +  N L+ ++P +L     LT L +  NQIS ++   I  L +L + 
Sbjct: 332 S-FGNLPNLQELQLSVNQLSGTIPEELANCTKLTHLEIDNNQISGEIPPLIGKLTSLTMF 390

Query: 432 -VLSNNLLKKLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQLVS-LP 488
               N L   +P S+   ++L+ +DL  N L  S+PN I  ++ L +L+L SN L   +P
Sbjct: 391 FAWQNQLTGIIPESLSQCQELQAIDLSYNNLSGSIPNGIFEIRNLTKLLLLSNYLSGFIP 450

Query: 489 RAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIM 547
             IG+ TNL  L +  N L   IP EIG L+NL+ + +++N  + NIP E++ C++L+ +
Sbjct: 451 PDIGNCTNLYRLRLNGNRLAGNIPAEIGNLKNLNFIDISENRLIGNIPPEISGCTSLEFV 510

Query: 548 SL 549
            L
Sbjct: 511 DL 512



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 30/220 (13%)

Query: 115 HLPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQL 172
            +PP +   T+L  L L GN+LA  +P++IG + NL  + ++EN L   +P  ++    L
Sbjct: 448 FIPPDIGNCTNLYRLRLNGNRLAGNIPAEIGNLKNLNFIDISENRLIGNIPPEISGCTSL 507

Query: 173 RVLDLRHNKL-----------------------NELPMVVYKLTSLKILYLRFNRIKTVH 209
             +DL  N L                         LP  +  LT L  L L  NR     
Sbjct: 508 EFVDLHSNGLTGGLPGTLPKSLQFIDLSDNSLTGSLPTGIGSLTELTKLNLAKNRFSGEI 567

Query: 210 P-DIQYLSNLSMLSMRDNKIR-ELPPELGELKNL-VTLDLAHNHLE-ELPKEIGNCTMLV 265
           P +I    +L +L++ DN    E+P ELG + +L ++L+L+ NH   E+P    + T L 
Sbjct: 568 PREISSCRSLQLLNLGDNGFTGEIPNELGRIPSLAISLNLSCNHFTGEIPSRFSSLTNLG 627

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLES-VPETL 304
           TLD+ HN+L    ++L +L NL  L +S+N     +P TL
Sbjct: 628 TLDVSHNKLAGNLNVLADLQNLVSLNISFNEFSGELPNTL 667



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 101/206 (49%), Gaps = 11/206 (5%)

Query: 363 FEHNQIDKIPYGIFSRAKNLS--KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS-KLS 419
           F++    +IP  I    KNL   +     NL   LP ++G    L  L L    +S +L 
Sbjct: 176 FDNKLAGEIPRTI-GELKNLEIFRAGGNKNLRGELPWEIGNCESLVTLGLAETSLSGRLP 234

Query: 420 EDIQNLVNLEVLVLSNNLLKK-LPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRL 477
             I NL  ++ + L  +LL   +P  IGN  +L+ L L +N +  S+P  +G LK+LQ L
Sbjct: 235 ASIGNLKKVQTIALYTSLLSGPIPDEIGNCTELQNLYLYQNSISGSIPVSMGRLKKLQSL 294

Query: 478 ILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLHTLYLNDNTCLNNIP 535
           +L  N LV  +P  +G    L  + + EN L   IP   G L NL  L L+ N     IP
Sbjct: 295 LLWQNNLVGKIPTELGTCPELFLVDLSENLLTGNIPRSFGNLPNLQELQLSVNQLSGTIP 354

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEI 561
            ELA C+ L  + +DN   +QI  EI
Sbjct: 355 EELANCTKLTHLEIDN---NQISGEI 377



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 28/150 (18%)

Query: 106 LDLSKSSIT-HLPPSVEKLTHLEELYLYGNKLAS-LPSQIGYVTNLTCLGLAENSLTS-- 161
           +DLS +S+T  LP  +  LT L +L L  N+ +  +P +I    +L  L L +N  T   
Sbjct: 532 IDLSDNSLTGSLPTGIGSLTELTKLNLAKNRFSGEIPREISSCRSLQLLNLGDNGFTGEI 591

Query: 162 ------------------------LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
                                   +P   ++L  L  LD+ HNKL     V+  L +L  
Sbjct: 592 PNELGRIPSLAISLNLSCNHFTGEIPSRFSSLTNLGTLDVSHNKLAGNLNVLADLQNLVS 651

Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
           L + FN      P+  +   L +  +  NK
Sbjct: 652 LNISFNEFSGELPNTLFFRKLPLSVLESNK 681


>gi|449704403|gb|EMD44652.1| leucinerich repeat-containing protein [Entamoeba histolytica KU27]
          Length = 861

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 221/462 (47%), Gaps = 42/462 (9%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGY-------------------- 145
           +D+S + I  +P  +  +  L++     N + +LPSQI                      
Sbjct: 34  IDVSMNRIQEIPSQINSIPKLQKFRGNDNMIKTLPSQINIPSLKTLDLSSNHLKRFCKSI 93

Query: 146 -VTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR 204
            +T+LT + L+ N +T + D   +L  LR +DL  N++  +P  + KLTSL  + +  N 
Sbjct: 94  KLTSLTEINLSINQITKIDDDFGSLHALRFMDLSINRIQSVPKHLSKLTSLTFIDISNNL 153

Query: 205 IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTML 264
           + +    +  LS+L +L +++NKI  +P  + ++ NL  LD+++N ++++   +   T L
Sbjct: 154 LTSFPTPLLELSSLIVLKVKENKITTIPNGMSKMSNLQILDISNNKIDKITPSLCKLTKL 213

Query: 265 VTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
             LD+  N +  I D + NL  +  + +SY+ L+++P++    V L +  ++  ++   P
Sbjct: 214 SVLDVSANPINEINDQIQNLTTIKEIDISYSPLKTLPKSFMSLVGLRKLTLQHTSVKVPP 273

Query: 325 DGLLSSLTSINNITLSRNKF---TAYPSGG--------------PTQFTSVYSINFEHNQ 367
            G L   T ++ + LS  +F   T  P  G              P    S++ +N   N+
Sbjct: 274 AG-LQKFTKVSELNLSNGEFEKVTELPCSGDIDLSCNQIVELDLPDMEYSIHKLNLGQNR 332

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
           +   P       + +  + ++ N+L S+PL++ T   LT L+L +N  +     I    N
Sbjct: 333 LKDFPN--IKCLREIKTLILQKNMLGSIPLEMFTGTSLTALDLSSNSFNAFPMSITTCTN 390

Query: 428 LEVLVLSNNLLKKLPS-SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
           L VL +SNN L  LP  S     KL+ L L  N ++ LP  +  L  L  L L+ N+L  
Sbjct: 391 LVVLNMSNNYLDSLPDISYSCFAKLEALLLGINIIDRLPETMSELTNLTTLHLEHNKLSK 450

Query: 487 LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           +P ++  +T L  L +  N +  +PE+   L NL  L L+ N
Sbjct: 451 IPESLFSMTKLVELFLNCNQIPELPEKFSLLTNLEILELSCN 492



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 195/406 (48%), Gaps = 10/406 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           ++LS + IT +      L  L  + L  N++ S+P  +  +T+LT + ++ N LTS P  
Sbjct: 101 INLSINQITKIDDDFGSLHALRFMDLSINRIQSVPKHLSKLTSLTFIDISNNLLTSFPTP 160

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L  L  L VL ++ NK+  +P  + K+++L+IL +  N+I  + P +  L+ LS+L +  
Sbjct: 161 LLELSSLIVLKVKENKITTIPNGMSKMSNLQILDISNNKIDKITPSLCKLTKLSVLDVSA 220

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N I E+  ++  L  +  +D++++ L+ LPK   +   L  L LQH  +   P  L    
Sbjct: 221 NPINEINDQIQNLTTIKEIDISYSPLKTLPKSFMSLVGLRKLTLQHTSVKVPPAGLQKFT 280

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            ++ L LS    E V E    C    + +        LPD       SI+ + L +N+  
Sbjct: 281 KVSELNLSNGEFEKVTEL--PCSGDIDLSCNQIVELDLPDMEY----SIHKLNLGQNRLK 334

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P+        + ++  + N +  IP  +F+   +L+ +++  N   + P+ + T   L
Sbjct: 335 DFPN--IKCLREIKTLILQKNMLGSIPLEMFT-GTSLTALDLSSNSFNAFPMSITTCTNL 391

Query: 406 TELNLGTNQISKLSE-DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
             LN+  N +  L +        LE L+L  N++ +LP ++  L  L  L LE NKL  +
Sbjct: 392 VVLNMSNNYLDSLPDISYSCFAKLEALLLGINIIDRLPETMSELTNLTTLHLEHNKLSKI 451

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           P  +  + +L  L L  NQ+  LP     LTNL  L +  N ++ I
Sbjct: 452 PESLFSMTKLVELFLNCNQIPELPEKFSLLTNLEILELSCNYIKEI 497



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 169/389 (43%), Gaps = 93/389 (23%)

Query: 228 IRELPPE--LGELKNLVTLDLAHNHLEELPKEI----------GNCTMLVTL-------- 267
           + E P E    ELK +V +D++ N ++E+P +I          GN  M+ TL        
Sbjct: 16  LTEFPQEEVKKELKTVVLIDVSMNRIQEIPSQINSIPKLQKFRGNDNMIKTLPSQINIPS 75

Query: 268 --------------------------DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
                                     +L  N++  I D  G+L  L  + LS NR++SVP
Sbjct: 76  LKTLDLSSNHLKRFCKSIKLTSLTEINLSINQITKIDDDFGSLHALRFMDLSINRIQSVP 135

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
           + LSK   L   ++    L+S P  LL  L+S+  + +  NK T  P+G  ++ +++  +
Sbjct: 136 KHLSKLTSLTFIDISNNLLTSFPTPLL-ELSSLIVLKVKENKITTIPNGM-SKMSNLQIL 193

Query: 362 NFEHNQIDKIPYGIFSRAK----------------------NLSKVNMKDNLLTSLPLDL 399
           +  +N+IDKI   +    K                       + ++++  + L +LP   
Sbjct: 194 DISNNKIDKITPSLCKLTKLSVLDVSANPINEINDQIQNLTTIKEIDISYSPLKTLPKSF 253

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK---LPSSIGNLRKLKC--- 453
            + VGL +L L    +      +Q    +  L LSN   +K   LP S G++  L C   
Sbjct: 254 MSLVGLRKLTLQHTSVKVPPAGLQKFTKVSELNLSNGEFEKVTELPCS-GDI-DLSCNQI 311

Query: 454 --------------LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
                         L+L +N+L+  PN I  L+E++ LILQ N L S+P  +   T+L+ 
Sbjct: 312 VELDLPDMEYSIHKLNLGQNRLKDFPN-IKCLREIKTLILQKNMLGSIPLEMFTGTSLTA 370

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L +  N+  + P  I T  NL  L +++N
Sbjct: 371 LDLSSNSFNAFPMSITTCTNLVVLNMSNN 399



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 158/358 (44%), Gaps = 47/358 (13%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           CK   +  LD+S + I  +   ++ LT ++E+ +  + L +LP     +  L  L L   
Sbjct: 208 CKLTKLSVLDVSANPINEINDQIQNLTTIKEIDISYSPLKTLPKSFMSLVGLRKLTLQHT 267

Query: 158 SLTSLPDSLANLQQLRVLDLRHN---KLNELP-----------MVVYKL----TSLKILY 199
           S+   P  L    ++  L+L +    K+ ELP           +V   L     S+  L 
Sbjct: 268 SVKVPPAGLQKFTKVSELNLSNGEFEKVTELPCSGDIDLSCNQIVELDLPDMEYSIHKLN 327

Query: 200 LRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIG 259
           L  NR+K   P+I+ L  +  L ++ N +  +P E+    +L  LDL+ N     P  I 
Sbjct: 328 LGQNRLKDF-PNIKCLREIKTLILQKNMLGSIPLEMFTGTSLTALDLSSNSFNAFPMSIT 386

Query: 260 NCTMLVTLDLQHNELVNIPDM-LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
            CT LV L++ +N L ++PD+       L  L L  N ++ +PET+S+  +L   ++E  
Sbjct: 387 TCTNLVVLNMSNNYLDSLPDISYSCFAKLEALLLGINIIDRLPETMSELTNLTTLHLEHN 446

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
            LS +P+ L S                          T +  +    NQI ++P   FS 
Sbjct: 447 KLSKIPESLFS-------------------------MTKLVELFLNCNQIPELPEK-FSL 480

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
             NL  + +  N +  +   +   VG+ +L+L TNQI K   D+  + +L  L LS N
Sbjct: 481 LTNLEILELSCNYIKEIT-PIVNLVGVKDLDLSTNQIEKCPSDLCGMTSLRSLDLSYN 537



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 81/141 (57%), Gaps = 4/141 (2%)

Query: 420 EDIQNLVNLEVLV-LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
           E+++  +   VL+ +S N ++++PS I ++ KL+     +N +++LP++I  +  L+ L 
Sbjct: 22  EEVKKELKTVVLIDVSMNRIQEIPSQINSIPKLQKFRGNDNMIKTLPSQIN-IPSLKTLD 80

Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFEL 538
           L SN L    ++I  LT+L+ +++  N +  I ++ G+L  L  + L+ N  + ++P  L
Sbjct: 81  LSSNHLKRFCKSI-KLTSLTEINLSINQITKIDDDFGSLHALRFMDLSINR-IQSVPKHL 138

Query: 539 ALCSNLQIMSLDNCPLSQIPS 559
           +  ++L  + + N  L+  P+
Sbjct: 139 SKLTSLTFIDISNNLLTSFPT 159


>gi|297672458|ref|XP_002814314.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Pongo abelii]
          Length = 560

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 215/460 (46%), Gaps = 54/460 (11%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +D S  S+T +P  +   T LEE++L  N++  +P +I  + N   L L +N+L SL  +
Sbjct: 30  IDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNTRVLYLDKNNLRSLCPA 89

Query: 166 ------------------------LANLQQLRVLDLRHNKLNELPMVVYK---------- 191
                                   +  L  LR L L    L E+P+V+ K          
Sbjct: 90  LGLLSSLESLDLSYNPIFSSSLVVVGFLHALRELRLYQTDLKEIPVVICKNLHHLELLGL 149

Query: 192 --------------LTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
                          T L+ +YL+ N+ +    ++  L  L ++ + +NKI  +P E+G 
Sbjct: 150 TGNHLKCLPKEIVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPEEIGH 209

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L  L    +A N+L  LP  +  C+ L  LDL HN L +IP  L  L  +T + LS NRL
Sbjct: 210 LTGLQKFYMASNNLPVLPASLCQCSQLSVLDLSHNLLHSIPKSLAELRKMTEIGLSGNRL 269

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
           E VP  + +   L+   +    L  L  G    L ++  + LSRN     P        +
Sbjct: 270 EKVPRLICRWTSLHLLYLGNTGLHRL-RGSFRCLVNLRFLDLSRNHLDHCPL-QICALKN 327

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +  +  + N+I ++P  + S +K L  + +  N   S P ++ +   L +L +G +Q  K
Sbjct: 328 LEVLGLDDNKIGQLPSELGSLSK-LKILGLTGNEFLSFPEEVLSLASLEKLYMGQDQGFK 386

Query: 418 LS---EDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           L+   E I+ L +L+ L + NN L+ LP S+G++  L+ LD   N L+ LP+ I   + L
Sbjct: 387 LTYVPEHIRKLQSLKELYIENNHLEYLPISLGSMPNLEVLDCRHNLLKQLPDAICQAQAL 446

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEI 514
           + L L+ N L  LP  +  L NL  L++ +N ++  P+E+
Sbjct: 447 KELQLEDNLLTHLPENLDSLVNLKVLTLMDNPMEEPPKEV 486



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 198/437 (45%), Gaps = 74/437 (16%)

Query: 174 VLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPP 233
            +D  +  L  +P+ ++  T L+ ++L  N+I+ +  +IQ L N  +L +  N +R L P
Sbjct: 29  FIDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNTRVLYLDKNNLRSLCP 88

Query: 234 ELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLS 293
            LG L +L +LDL++N        I + +++V               +G L  L  LRL 
Sbjct: 89  ALGLLSSLESLDLSYN-------PIFSSSLVV---------------VGFLHALRELRLY 126

Query: 294 YNRLESVPETLSKCVH-LNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
              L+ +P  + K +H L    + G  L  LP  +++  T +  I L RN+F  +P    
Sbjct: 127 QTDLKEIPVVICKNLHHLELLGLTGNHLKCLPKEIVNQ-TKLREIYLKRNQFEVFPQELC 185

Query: 353 TQFTSVYSINFEHNQIDKIPYGI--------FSRAKN--------------LSKVNMKDN 390
             +T +  I+ + N+I  IP  I        F  A N              LS +++  N
Sbjct: 186 VLYT-LEIIDLDENKIGAIPEEIGHLTGLQKFYMASNNLPVLPASLCQCSQLSVLDLSHN 244

Query: 391 LLTSLPLDLG-----------------------TWVGLTELNLGTNQISKLSEDIQNLVN 427
           LL S+P  L                         W  L  L LG   + +L    + LVN
Sbjct: 245 LLHSIPKSLAELRKMTEIGLSGNRLEKVPRLICRWTSLHLLYLGNTGLHRLRGSFRCLVN 304

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           L  L LS N L   P  I  L+ L+ L L++NK+  LP+E+G L +L+ L L  N+ +S 
Sbjct: 305 LRFLDLSRNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLSKLKILGLTGNEFLSF 364

Query: 488 PRAIGHLTNLSYLSVGENN---LQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
           P  +  L +L  L +G++    L  +PE I  L++L  LY+ +N  L  +P  L    NL
Sbjct: 365 PEEVLSLASLEKLYMGQDQGFKLTYVPEHIRKLQSLKELYIENNH-LEYLPISLGSMPNL 423

Query: 545 QIMSLDNCPLSQIPSEI 561
           +++   +  L Q+P  I
Sbjct: 424 EVLDCRHNLLKQLPDAI 440


>gi|58332470|ref|NP_001011310.1| leucine-rich repeat-containing protein 40 [Xenopus (Silurana)
           tropicalis]
 gi|82232111|sp|Q5M8G4.1|LRC40_XENTR RecName: Full=Leucine-rich repeat-containing protein 40
 gi|56789102|gb|AAH88034.1| hypothetical LOC496765 [Xenopus (Silurana) tropicalis]
          Length = 605

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 131/434 (30%), Positives = 226/434 (52%), Gaps = 12/434 (2%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           +N+ +L L  + +  LP S+  L+ LEEL +  N L S+ S +G +T L    L+ N LT
Sbjct: 151 QNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLT 210

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
           +LP  +  ++ L+ LD   N L  +P  V  + SL+ LYLR N++ T  P++ +L+ L  
Sbjct: 211 ALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKL-TYLPELPFLTKLKE 269

Query: 221 LSMRDNKIRELPPE-LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
           L + +N+I+ L PE L  L +L  L+L +N L+ LP+EI     L  LDL +N+L ++P 
Sbjct: 270 LHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGSLPC 329

Query: 280 MLGNLINLTRLRLSYNRLESVP-ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNIT 338
            LG+L NL  L+L  N L  +  + L+K        ++G     +PD          N T
Sbjct: 330 TLGSLPNLKSLQLEGNPLRGIRRDILNKGTQELLKYLKGRV--QVPD---VKTQEDENST 384

Query: 339 LSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKN--LSKVNMKDNLLTSLP 396
            +     +          ++ ++ +   Q   IP  +F+   +  ++ VN   N LT +P
Sbjct: 385 ATAMTLPSESVVNTHAIVTLKTLEYCEKQASLIPEAVFNATGSSFITTVNFSKNQLTEVP 444

Query: 397 LDLGTWV-GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
             +      + ++NLG N+IS +S ++  L+ L  + + NN+L  LPS +  + +L+ + 
Sbjct: 445 ARIVEMKDSVCDVNLGFNKISSISLNLCMLLKLTHIDMRNNVLTSLPSEMEAMTRLQSVI 504

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSL-PRAIGHLTNLSYLSVGENNLQSIPEEI 514
           L  N+ +  P+ +  +  L+ +++ SNQ+ S+ P  +  +T LS L +  N+L  IP  +
Sbjct: 505 LSFNRFKHFPDVLYRIPTLETILISSNQIGSIDPTQLIKMTKLSTLDLQNNDLLQIPPAL 564

Query: 515 GTLENLHTLYLNDN 528
           G  E+L  L+L  N
Sbjct: 565 GNCESLRALHLEGN 578



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 235/504 (46%), Gaps = 37/504 (7%)

Query: 75  PKPTTKKKEPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGN 134
           P P +  + P + +  +    ++   ++   L+LS   +T +P SV ++        + N
Sbjct: 11  PDPLSGFRAPKEQEPAVPHGLIKAARKSG-QLNLSARGLTDVPVSVWRINVDTPPEAHQN 69

Query: 135 KLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTS 194
                  +    T+LT L LA N L  L + ++ L  L VLD+  N++  LP  + +LT+
Sbjct: 70  VDFGGSDRWWEQTDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTN 129

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L+ L +  N+IK +  ++Q+L NL  L ++ N++ ELP  +G L  L  LD+++N L  +
Sbjct: 130 LQKLNISHNKIKQLPKELQHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSI 189

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
              +G  T LV  +L  N+L  +P  +G + NL +L  + N LE+VP +++    L +  
Sbjct: 190 SSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLY 249

Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYG 374
           +    L+ LP+  L  LT +  + +  N+            +S+  +   +N++  +P  
Sbjct: 250 LRQNKLTYLPE--LPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEE 307

Query: 375 IFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS 434
           I S    L ++++ +N L SLP  LG+   L  L L  N +  +  DI N    E     
Sbjct: 308 I-SLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQE----- 361

Query: 435 NNLLKKLPSSIGNLRKLKCLDLEENKLES--LPNE----IGFLKELQRLILQSNQLVSLP 488
             LLK L   +  +  +K  + E +   +  LP+E       +  L+ L     Q   +P
Sbjct: 362 --LLKYLKGRV-QVPDVKTQEDENSTATAMTLPSESVVNTHAIVTLKTLEYCEKQASLIP 418

Query: 489 RAIGHLTNLSYLSV---GENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF------ELA 539
            A+ + T  S+++     +N L  +P  I        + + D+ C  N+ F       L 
Sbjct: 419 EAVFNATGSSFITTVNFSKNQLTEVPARI--------VEMKDSVCDVNLGFNKISSISLN 470

Query: 540 LCSNLQIMSLD--NCPLSQIPSEI 561
           LC  L++  +D  N  L+ +PSE+
Sbjct: 471 LCMLLKLTHIDMRNNVLTSLPSEM 494



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 235/510 (46%), Gaps = 36/510 (7%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           ++ ++  L L+ + +  L   +  L  L  L ++ N++ SLP  I  +TNL  L ++ N 
Sbjct: 80  EQTDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNK 139

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           +  LP  L +LQ L+ L L+HN+L ELP  +  L+ L+ L +  N ++++   +  L+ L
Sbjct: 140 IKQLPKELQHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLTGL 199

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
              ++  NK+  LP E+G++KNL  LD   N LE +P  +     L  L L+ N+L  +P
Sbjct: 200 VKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLP 259

Query: 279 DM-----------------------LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
           ++                       L NL +L+ L L YN+L+ +PE +S    L   ++
Sbjct: 260 ELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDL 319

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
               L SLP   L SL ++ ++ L  N           + T    + +   ++ ++P   
Sbjct: 320 SNNDLGSLP-CTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQEL-LKYLKGRV-QVPDVK 376

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLV--- 432
               +N +   M   L +   ++    V L  L     Q S + E + N      +    
Sbjct: 377 TQEDENSTATAM--TLPSESVVNTHAIVTLKTLEYCEKQASLIPEAVFNATGSSFITTVN 434

Query: 433 LSNNLLKKLPSSIGNLRKLKC-LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            S N L ++P+ I  ++   C ++L  NK+ S+   +  L +L  + +++N L SLP  +
Sbjct: 435 FSKNQLTEVPARIVEMKDSVCDVNLGFNKISSISLNLCMLLKLTHIDMRNNVLTSLPSEM 494

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
             +T L  + +  N  +  P+ +  +  L T+ ++ N   +  P +L   + L  + L N
Sbjct: 495 EAMTRLQSVILSFNRFKHFPDVLYRIPTLETILISSNQIGSIDPTQLIKMTKLSTLDLQN 554

Query: 552 CPLSQIPSEIVVGGPSLIIRYLKMQG-PYR 580
             L QIP  +   G    +R L ++G P+R
Sbjct: 555 NDLLQIPPAL---GNCESLRALHLEGNPFR 581



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 176/332 (53%), Gaps = 6/332 (1%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           L+L+   L ++P  +    +    +   N      D      +LT+L L+ N+L+ + E 
Sbjct: 41  LNLSARGLTDVPVSVWRINVDTPPEAHQNVDFGGSDRWWEQTDLTKLILASNKLQLLSED 100

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
           +S    L   ++    + SLP  +   LT++  + +S NK    P        ++ S+  
Sbjct: 101 ISLLPALVVLDIHDNQIVSLPCAI-KELTNLQKLNISHNKIKQLPKEL-QHLQNLKSLLL 158

Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
           +HNQ++++P  I      L ++++ +N L S+   +G   GL + NL +N+++ L  +I 
Sbjct: 159 QHNQLEELPDSI-GHLSILEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTALPTEIG 217

Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
            + NL+ L  ++NLL+ +P+S+  +  L+ L L +NKL  LP E+ FL +L+ L + +NQ
Sbjct: 218 KMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLP-ELPFLTKLKELHVGNNQ 276

Query: 484 LVSL-PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
           + +L P  + +L++LS L +  N L+ +PEEI  L  L  L L++N  L ++P  L    
Sbjct: 277 IQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNND-LGSLPCTLGSLP 335

Query: 543 NLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
           NL+ + L+  PL  I  +I+  G   +++YLK
Sbjct: 336 NLKSLQLEGNPLRGIRRDILNKGTQELLKYLK 367



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 81/146 (55%), Gaps = 4/146 (2%)

Query: 134 NKLASLPSQIGYVTNLTC-LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKL 192
           N+L  +P++I  + +  C + L  N ++S+  +L  L +L  +D+R+N L  LP  +  +
Sbjct: 438 NQLTEVPARIVEMKDSVCDVNLGFNKISSISLNLCMLLKLTHIDMRNNVLTSLPSEMEAM 497

Query: 193 TSLKILYLRFNRIKTVHPDIQY-LSNLSMLSMRDNKIREL-PPELGELKNLVTLDLAHNH 250
           T L+ + L FNR K   PD+ Y +  L  + +  N+I  + P +L ++  L TLDL +N 
Sbjct: 498 TRLQSVILSFNRFKHF-PDVLYRIPTLETILISSNQIGSIDPTQLIKMTKLSTLDLQNND 556

Query: 251 LEELPKEIGNCTMLVTLDLQHNELVN 276
           L ++P  +GNC  L  L L+ N   N
Sbjct: 557 LLQIPPALGNCESLRALHLEGNPFRN 582



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 64/132 (48%), Gaps = 1/132 (0%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           C    + ++D+  + +T LP  +E +T L+ + L  N+    P  +  +  L  + ++ N
Sbjct: 472 CMLLKLTHIDMRNNVLTSLPSEMEAMTRLQSVILSFNRFKHFPDVLYRIPTLETILISSN 531

Query: 158 SLTSL-PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
            + S+ P  L  + +L  LDL++N L ++P  +    SL+ L+L  N  +     I    
Sbjct: 532 QIGSIDPTQLIKMTKLSTLDLQNNDLLQIPPALGNCESLRALHLEGNPFRNPRAAILAKG 591

Query: 217 NLSMLSMRDNKI 228
            +++L    ++I
Sbjct: 592 TVAVLEYLRSRI 603


>gi|196008717|ref|XP_002114224.1| hypothetical protein TRIADDRAFT_27850 [Trichoplax adhaerens]
 gi|190583243|gb|EDV23314.1| hypothetical protein TRIADDRAFT_27850 [Trichoplax adhaerens]
          Length = 608

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 226/467 (48%), Gaps = 41/467 (8%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           ++ LD+  + + ++P SV +L  L +L L  N L  LP+    + NL  L L  N LT L
Sbjct: 114 LVALDIRDNQLENIPESVRELQQLSKLALSRNALVGLPNATCDLINLKSLMLEHNKLTEL 173

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P  + NL  L +LD+ +N+L+ELP  + KL  LK L +  N+++ +  +I ++  L  L+
Sbjct: 174 PSEIGNLLHLEILDISNNQLSELPHSIQKLACLKFLNMSNNKLEVLPSEIAFMKGLKDLN 233

Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELP--------KEI---------------G 259
           +  NKI+EL  +   L  L  LD+  NH+EE+P        KE+                
Sbjct: 234 ISSNKIKELKVDFQLLNKLERLDIRCNHIEEVPVFSTDNTLKELYLGSNRIKNLLGSTLQ 293

Query: 260 NCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA 319
             +++  +D+  N++  +PD + N+  L R  L+ N +  +P  +     L    + G  
Sbjct: 294 KLSVVAIMDMSENKIEFVPDEVVNMKQLERFDLTNNDISGLPCNMGNMTQLKSLILNGNP 353

Query: 320 LSSLPDGLLSSLT-SINNITLSRNKFTA--YPSGGPTQFTSVYSINFEHN---------- 366
           L +L   ++   T +I     SR   T     S   T       IN  H+          
Sbjct: 354 LRTLRRDIVQRGTVAILKFLRSRIAGTIPDLASSVDTNTQGNTRINATHSSTGSNVDASE 413

Query: 367 QIDKIP---YGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG-LTELNLGTNQISKLSEDI 422
           +  +IP   + + + +  +  V+ + N+LT++P  L  +   + EL L +N++S+L   +
Sbjct: 414 KTSEIPGDLWSVVAGSDQIRVVDFRKNVLTTVPEPLIEFSSRIEELYLSSNKLSQLPSSM 473

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
            N   L  L L NN L  LP  + ++ KL+ + L  N+  ++P+ I  L  L+ L+   N
Sbjct: 474 ANFTKLTYLDLGNNQLGNLPIEMESMTKLREIILSNNRFAAIPSVIYTLSSLEVLLATDN 533

Query: 483 QLVSLP-RAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           ++ S+    +  L+ LS L +  N+++ +P E+GTL+ L +L L  N
Sbjct: 534 KIESIDVSGLKQLSELSVLDLQNNDIKEVPPELGTLKALKSLQLGGN 580



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 132/546 (24%), Positives = 233/546 (42%), Gaps = 76/546 (13%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLE-ELYLYGNKLASLPSQIGYVTNL 149
           I+  F R   +N  N     S  T +P ++ K       L L    LA +P  +  +   
Sbjct: 9   IKSNFDRQAFKNKFNQGKDNSIATGVPNALLKQARKSGSLNLSNRSLAEVPDDVWRINLD 68

Query: 150 TCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVH 209
                  +S+ +  D   +  +L  LDL  N+L  +   V  L +L  L +R N+++ + 
Sbjct: 69  ASKSQQSSSMDNDQDRWWDQVELSKLDLSSNQLKAISDDVKLLNALVALDIRDNQLENIP 128

Query: 210 PDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDL 269
             ++ L  LS L++  N +  LP    +L NL +L L HN L ELP EIGN   L  LD+
Sbjct: 129 ESVRELQQLSKLALSRNALVGLPNATCDLINLKSLMLEHNKLTELPSEIGNLLHLEILDI 188

Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG--- 326
            +N+L  +P  +  L  L  L +S N+LE +P  ++    L + N+    +  L      
Sbjct: 189 SNNQLSELPHSIQKLACLKFLNMSNNKLEVLPSEIAFMKGLKDLNISSNKIKELKVDFQL 248

Query: 327 ------------------LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
                             + S+  ++  + L  N+          + + V  ++   N+I
Sbjct: 249 LNKLERLDIRCNHIEEVPVFSTDNTLKELYLGSNRIKNLLGSTLQKLSVVAIMDMSENKI 308

Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
           + +P  + +  K L + ++ +N ++ LP ++G    L  L L  N +  L  DI     +
Sbjct: 309 EFVPDEVVN-MKQLERFDLTNNDISGLPCNMGNMTQLKSLILNGNPLRTLRRDIVQRGTV 367

Query: 429 EVL-VLSNNLLKKLP---SSI-----GNLR------------------------------ 449
            +L  L + +   +P   SS+     GN R                              
Sbjct: 368 AILKFLRSRIAGTIPDLASSVDTNTQGNTRINATHSSTGSNVDASEKTSEIPGDLWSVVA 427

Query: 450 ---KLKCLDLEENKLESLPNE-IGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
              +++ +D  +N L ++P   I F   ++ L L SN+L  LP ++ + T L+YL +G N
Sbjct: 428 GSDQIRVVDFRKNVLTTVPEPLIEFSSRIEELYLSSNKLSQLPSSMANFTKLTYLDLGNN 487

Query: 506 NLQSIPEEIGTLENLHTLYLNDNTCLNNIP--------FELALCSNLQIMSLDNCPLSQI 557
            L ++P E+ ++  L  + L++N     IP         E+ L ++ +I S+D   L Q+
Sbjct: 488 QLGNLPIEMESMTKLREIILSNNR-FAAIPSVIYTLSSLEVLLATDNKIESIDVSGLKQL 546

Query: 558 PSEIVV 563
            SE+ V
Sbjct: 547 -SELSV 551


>gi|124008181|ref|ZP_01692878.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123986280|gb|EAY26102.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 391

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 104/313 (33%), Positives = 172/313 (54%), Gaps = 3/313 (0%)

Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
           +++ M+ + +  +  L  ++   KNL  L+L  N L ELP EIG+ T L  L L +N+L 
Sbjct: 61  NDVYMMKLANKDMLVLSKKIARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQLE 120

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN 335
            +P  +G L +L  LR+S NRL ++P  + K   L    +    L +LP  +   L  + 
Sbjct: 121 KLPPEIGKLTHLLELRVSANRLTTLPPEIGKLQSLQYLYIPNNKLITLPPEI-GQLAQLK 179

Query: 336 NITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL 395
            + L  N+ T  P+    +  ++ S+   +N+++++P+ I  + KNL    + +N L  L
Sbjct: 180 RLFLEHNQLTQLPASI-GKLNNLQSLILNNNRVNQLPHEI-GQLKNLHTFYLANNRLKEL 237

Query: 396 PLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLD 455
           P ++ T   L +L L  NQ+ +L   +  L  L++L L  N   ++P++I  L  L+ L 
Sbjct: 238 PQEILTLQNLKKLYLVGNQLQQLPPQLAKLDKLQILDLQKNNFSEVPAAITKLTNLQKLW 297

Query: 456 LEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIG 515
           L  N+L SL  EIG L+ LQ L L+ N++  LP +IG + +L +LS+ +N L S+P+EIG
Sbjct: 298 LNNNQLTSLNAEIGKLQNLQILYLEENKITELPTSIGSIQSLKHLSLSDNMLTSLPQEIG 357

Query: 516 TLENLHTLYLNDN 528
            L  L  LYL +N
Sbjct: 358 QLRKLQALYLRNN 370



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 114/329 (34%), Positives = 173/329 (52%), Gaps = 28/329 (8%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           L + K+  R K   +LNL  +K  +T LPP +  LT L++L L  N+L  LP +IG +T+
Sbjct: 74  LVLSKKIARFKNLQVLNLQQNK--LTELPPEIGDLTKLQKLILSNNQLEKLPPEIGKLTH 131

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L ++ N LT+LP  +  LQ L+ L + +NKL  LP  + +L  LK L+L  N++  +
Sbjct: 132 LLELRVSANRLTTLPPEIGKLQSLQYLYIPNNKLITLPPEIGQLAQLKRLFLEHNQLTQL 191

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
              I  L+NL  L + +N++ +LP E+G+LKNL T  LA+N L+ELP+EI     L  L 
Sbjct: 192 PASIGKLNNLQSLILNNNRVNQLPHEIGQLKNLHTFYLANNRLKELPQEILTLQNLKKLY 251

Query: 269 LQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLL 328
           L  N+L  +P  L  L  L  L L  N    VP  ++K  +L +  +    L+SL +  +
Sbjct: 252 LVGNQLQQLPPQLAKLDKLQILDLQKNNFSEVPAAITKLTNLQKLWLNNNQLTSL-NAEI 310

Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
             L ++  + L  NK T  P       TS+ SI                  ++L  +++ 
Sbjct: 311 GKLQNLQILYLEENKITELP-------TSIGSI------------------QSLKHLSLS 345

Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           DN+LTSLP ++G    L  L L  NQ+ K
Sbjct: 346 DNMLTSLPQEIGQLRKLQALYLRNNQLPK 374



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 159/296 (53%), Gaps = 3/296 (1%)

Query: 212 IQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQH 271
           I    NL +L+++ NK+ ELPPE+G+L  L  L L++N LE+LP EIG  T L+ L +  
Sbjct: 80  IARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQLEKLPPEIGKLTHLLELRVSA 139

Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSL 331
           N L  +P  +G L +L  L +  N+L ++P  + +   L    +E   L+ LP  +   L
Sbjct: 140 NRLTTLPPEIGKLQSLQYLYIPNNKLITLPPEIGQLAQLKRLFLEHNQLTQLPASI-GKL 198

Query: 332 TSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNL 391
            ++ ++ L+ N+    P     Q  ++++    +N++ ++P  I +  +NL K+ +  N 
Sbjct: 199 NNLQSLILNNNRVNQLPHEI-GQLKNLHTFYLANNRLKELPQEILT-LQNLKKLYLVGNQ 256

Query: 392 LTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKL 451
           L  LP  L     L  L+L  N  S++   I  L NL+ L L+NN L  L + IG L+ L
Sbjct: 257 LQQLPPQLAKLDKLQILDLQKNNFSEVPAAITKLTNLQKLWLNNNQLTSLNAEIGKLQNL 316

Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
           + L LEENK+  LP  IG ++ L+ L L  N L SLP+ IG L  L  L +  N L
Sbjct: 317 QILYLEENKITELPTSIGSIQSLKHLSLSDNMLTSLPQEIGQLRKLQALYLRNNQL 372



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 183/350 (52%), Gaps = 11/350 (3%)

Query: 99  KEENILN-------LDLSKSSI-THLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLT 150
           KEE  LN       ++L K  I T L  ++E+   +  + L    +  L  +I    NL 
Sbjct: 28  KEEPFLNSPGLLSDIELDKKPIYTSLEVALEQPNDVYMMKLANKDMLVLSKKIARFKNLQ 87

Query: 151 CLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP 210
            L L +N LT LP  + +L +L+ L L +N+L +LP  + KLT L  L +  NR+ T+ P
Sbjct: 88  VLNLQQNKLTELPPEIGDLTKLQKLILSNNQLEKLPPEIGKLTHLLELRVSANRLTTLPP 147

Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
           +I  L +L  L + +NK+  LPPE+G+L  L  L L HN L +LP  IG    L +L L 
Sbjct: 148 EIGKLQSLQYLYIPNNKLITLPPEIGQLAQLKRLFLEHNQLTQLPASIGKLNNLQSLILN 207

Query: 271 HNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
           +N +  +P  +G L NL    L+ NRL+ +P+ +    +L +  + G  L  LP  L + 
Sbjct: 208 NNRVNQLPHEIGQLKNLHTFYLANNRLKELPQEILTLQNLKKLYLVGNQLQQLPPQL-AK 266

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           L  +  + L +N F+  P+   T+ T++  +   +NQ+  +   I  + +NL  + +++N
Sbjct: 267 LDKLQILDLQKNNFSEVPAAI-TKLTNLQKLWLNNNQLTSLNAEI-GKLQNLQILYLEEN 324

Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK 440
            +T LP  +G+   L  L+L  N ++ L ++I  L  L+ L L NN L K
Sbjct: 325 KITELPTSIGSIQSLKHLSLSDNMLTSLPQEIGQLRKLQALYLRNNQLPK 374



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 108/320 (33%), Positives = 157/320 (49%), Gaps = 31/320 (9%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           + LA+  +  L K+I     L  L+LQ N+L  +P  +G+L  L +L LS N+LE +P  
Sbjct: 66  MKLANKDMLVLSKKIARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQLEKLPPE 125

Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSI 361
           + K  HL E  V    L++LP  +   L S+  + +  NK    P   G   Q   ++  
Sbjct: 126 IGKLTHLLELRVSANRLTTLPPEI-GKLQSLQYLYIPNNKLITLPPEIGQLAQLKRLF-- 182

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSED 421
             EHNQ                        LT LP  +G    L  L L  N++++L  +
Sbjct: 183 -LEHNQ------------------------LTQLPASIGKLNNLQSLILNNNRVNQLPHE 217

Query: 422 IQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQS 481
           I  L NL    L+NN LK+LP  I  L+ LK L L  N+L+ LP ++  L +LQ L LQ 
Sbjct: 218 IGQLKNLHTFYLANNRLKELPQEILTLQNLKKLYLVGNQLQQLPPQLAKLDKLQILDLQK 277

Query: 482 NQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           N    +P AI  LTNL  L +  N L S+  EIG L+NL  LYL +N  +  +P  +   
Sbjct: 278 NNFSEVPAAITKLTNLQKLWLNNNQLTSLNAEIGKLQNLQILYLEENK-ITELPTSIGSI 336

Query: 542 SNLQIMSLDNCPLSQIPSEI 561
            +L+ +SL +  L+ +P EI
Sbjct: 337 QSLKHLSLSDNMLTSLPQEI 356



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/187 (41%), Positives = 109/187 (58%), Gaps = 1/187 (0%)

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
            +R KNL  +N++ N LT LP ++G    L +L L  NQ+ KL  +I  L +L  L +S 
Sbjct: 80  IARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQLEKLPPEIGKLTHLLELRVSA 139

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N L  LP  IG L+ L+ L +  NKL +LP EIG L +L+RL L+ NQL  LP +IG L 
Sbjct: 140 NRLTTLPPEIGKLQSLQYLYIPNNKLITLPPEIGQLAQLKRLFLEHNQLTQLPASIGKLN 199

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS 555
           NL  L +  N +  +P EIG L+NLHT YL +N  L  +P E+    NL+ + L    L 
Sbjct: 200 NLQSLILNNNRVNQLPHEIGQLKNLHTFYLANNR-LKELPQEILTLQNLKKLYLVGNQLQ 258

Query: 556 QIPSEIV 562
           Q+P ++ 
Sbjct: 259 QLPPQLA 265


>gi|421099998|ref|ZP_15560640.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796979|gb|EKR99096.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 310

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 133/223 (59%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           ++L LDL+ + +T LP  + KL +L++LYL GN+L +LP  IGY+  L  L L +N L +
Sbjct: 43  DVLILDLTNNQLTTLPKDIGKLQNLQKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQLKT 102

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  +  LQ LRVL L HNKL  LP  + +L  L+ L+L  N+++T+  DI  L  L  L
Sbjct: 103 LPKEIGQLQNLRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTLPKDIGKLQKLREL 162

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            + +N++  LP ++G+L+ L  L L  N L  LPK+IG    L  L L  N+L  +P  +
Sbjct: 163 LLYNNQLTMLPKDIGQLQKLQRLHLGDNQLRTLPKDIGKLQNLRVLKLDSNQLATLPKDI 222

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
           G L NL  L L  N+L ++P+ + K  +L + ++ G   +++P
Sbjct: 223 GKLQNLQVLDLGGNQLATLPKDIGKLQNLQKLHLNGYEFTTIP 265



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 145/280 (51%), Gaps = 26/280 (9%)

Query: 252 EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN 311
           + L + + N T ++ LDL +N+L  +P  +G L NL +L L  N+L ++PE +     L 
Sbjct: 32  QNLIEALQNPTDVLILDLTNNQLTTLPKDIGKLQNLQKLYLDGNQLTTLPEDIGYLKELQ 91

Query: 312 EFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKI 371
             ++    L +LP  +   L ++  + LS NK T+ P                       
Sbjct: 92  VLHLYDNQLKTLPKEI-GQLQNLRVLGLSHNKLTSLPKD--------------------- 129

Query: 372 PYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
                 + + L ++++ DN L +LP D+G    L EL L  NQ++ L +DI  L  L+ L
Sbjct: 130 ----IGQLQKLQRLHLDDNQLRTLPKDIGKLQKLRELLLYNNQLTMLPKDIGQLQKLQRL 185

Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAI 491
            L +N L+ LP  IG L+ L+ L L+ N+L +LP +IG L+ LQ L L  NQL +LP+ I
Sbjct: 186 HLGDNQLRTLPKDIGKLQNLRVLKLDSNQLATLPKDIGKLQNLQVLDLGGNQLATLPKDI 245

Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
           G L NL  L +      +IP+EIG L+ L  LYL+D   L
Sbjct: 246 GKLQNLQKLHLNGYEFTTIPKEIGQLQKLQELYLDDTFAL 285



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 135/250 (54%), Gaps = 7/250 (2%)

Query: 99  KEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENS 158
           K +N+  L L  + +T LP  +  L  L+ L+LY N+L +LP +IG + NL  LGL+ N 
Sbjct: 63  KLQNLQKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQLKTLPKEIGQLQNLRVLGLSHNK 122

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           LTSLP  +  LQ+L+ L L  N+L  LP  + KL  L+ L L  N++  +  DI  L  L
Sbjct: 123 LTSLPKDIGQLQKLQRLHLDDNQLRTLPKDIGKLQKLRELLLYNNQLTMLPKDIGQLQKL 182

Query: 219 SMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP 278
             L + DN++R LP ++G+L+NL  L L  N L  LPK+IG    L  LDL  N+L  +P
Sbjct: 183 QRLHLGDNQLRTLPKDIGKLQNLRVLKLDSNQLATLPKDIGKLQNLQVLDLGGNQLATLP 242

Query: 279 DMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC-ALSSLPDGLLSSLTSINNI 337
             +G L NL +L L+     ++P+ + +   L E  ++   AL S    +   L  I+ I
Sbjct: 243 KDIGKLQNLQKLHLNGYEFTTIPKEIGQLQKLQELYLDDTFALRSQEKKIRKLLPKIHII 302

Query: 338 TLSRNKFTAY 347
                 FT Y
Sbjct: 303 ------FTQY 306



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/206 (39%), Positives = 128/206 (62%), Gaps = 2/206 (0%)

Query: 356 TSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQI 415
           T V  ++  +NQ+  +P  I  + +NL K+ +  N LT+LP D+G    L  L+L  NQ+
Sbjct: 42  TDVLILDLTNNQLTTLPKDI-GKLQNLQKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQL 100

Query: 416 SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQ 475
             L ++I  L NL VL LS+N L  LP  IG L+KL+ L L++N+L +LP +IG L++L+
Sbjct: 101 KTLPKEIGQLQNLRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTLPKDIGKLQKLR 160

Query: 476 RLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
            L+L +NQL  LP+ IG L  L  L +G+N L+++P++IG L+NL  L L+ N  L  +P
Sbjct: 161 ELLLYNNQLTMLPKDIGQLQKLQRLHLGDNQLRTLPKDIGKLQNLRVLKLDSNQ-LATLP 219

Query: 536 FELALCSNLQIMSLDNCPLSQIPSEI 561
            ++    NLQ++ L    L+ +P +I
Sbjct: 220 KDIGKLQNLQVLDLGGNQLATLPKDI 245



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/279 (35%), Positives = 147/279 (52%), Gaps = 31/279 (11%)

Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTS 333
           N+ + L N  ++  L L+ N+L ++P+ + K  +L +  ++G  L++LP+  G L  L  
Sbjct: 33  NLIEALQNPTDVLILDLTNNQLTTLPKDIGKLQNLQKLYLDGNQLTTLPEDIGYLKEL-- 90

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
                               Q   +Y      NQ+  +P  I  + +NL  + +  N LT
Sbjct: 91  --------------------QVLHLYD-----NQLKTLPKEI-GQLQNLRVLGLSHNKLT 124

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           SLP D+G    L  L+L  NQ+  L +DI  L  L  L+L NN L  LP  IG L+KL+ 
Sbjct: 125 SLPKDIGQLQKLQRLHLDDNQLRTLPKDIGKLQKLRELLLYNNQLTMLPKDIGQLQKLQR 184

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE 513
           L L +N+L +LP +IG L+ L+ L L SNQL +LP+ IG L NL  L +G N L ++P++
Sbjct: 185 LHLGDNQLRTLPKDIGKLQNLRVLKLDSNQLATLPKDIGKLQNLQVLDLGGNQLATLPKD 244

Query: 514 IGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNC 552
           IG L+NL  L+LN       IP E+     LQ + LD+ 
Sbjct: 245 IGKLQNLQKLHLN-GYEFTTIPKEIGQLQKLQELYLDDT 282



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 91/150 (60%), Gaps = 1/150 (0%)

Query: 412 TNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
           T     L E +QN  ++ +L L+NN L  LP  IG L+ L+ L L+ N+L +LP +IG+L
Sbjct: 28  TKTYQNLIEALQNPTDVLILDLTNNQLTTLPKDIGKLQNLQKLYLDGNQLTTLPEDIGYL 87

Query: 472 KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL 531
           KELQ L L  NQL +LP+ IG L NL  L +  N L S+P++IG L+ L  L+L+DN  L
Sbjct: 88  KELQVLHLYDNQLKTLPKEIGQLQNLRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQ-L 146

Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
             +P ++     L+ + L N  L+ +P +I
Sbjct: 147 RTLPKDIGKLQKLRELLLYNNQLTMLPKDI 176


>gi|86438633|emb|CAJ26360.1| clavata-like kinase [Brachypodium sylvaticum]
          Length = 1128

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 213/445 (47%), Gaps = 38/445 (8%)

Query: 116 LPPSVEKLTHLEELYLYGNKL--ASLPSQIGYVTNLTCLGLAENSLT-SLPDSLANLQQL 172
           +P S+ KL  L+ +   GN      LPS+IG  TNLT LGLAE  ++ SLP+++  L++L
Sbjct: 190 IPGSIGKLKQLQVIRAGGNVALKGPLPSEIGGCTNLTMLGLAETGMSGSLPETIGRLEKL 249

Query: 173 RVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIREL 231
           + L +    L   +P  +   T L  +YL  N +                         +
Sbjct: 250 QTLAIYTTLLSGRIPESIGNCTELANIYLYQNSLSG----------------------PI 287

Query: 232 PPELGELKNLVTLDLAHNHL-EELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTR 289
           PP+LG L+ L TL L  N L   +P EIG C  L  +DL  N L   IP   G L NL +
Sbjct: 288 PPQLGRLRKLQTLLLWQNQLVGAIPPEIGQCEELTLMDLSLNSLSGSIPASFGRLKNLQQ 347

Query: 290 LRLSYNRLE-SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYP 348
           L+LS NRL  ++P  LS C  L +  V+  ALS         L S+      +N  T   
Sbjct: 348 LQLSTNRLTGAIPPELSNCTSLTDIEVDNNALSGDIRLDFPKLPSLTLFYAWKNGLTGGV 407

Query: 349 SGGPTQFTSVYSINFEHNQI-DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTE 407
                +  S+ S++  +N +   IP  +F+       + +++ L   +P D+G    L  
Sbjct: 408 PASLAECASLQSVDLSYNNLTGPIPRELFALQNLTKLLLLENELSGFVPPDIGNCTSLYR 467

Query: 408 LNLGTNQISK-LSEDIQNLVNLEVLVLSNN-LLKKLPSSIGNLRKLKCLDLEENKLE-SL 464
           L L  N++S  +  +I NL +L  L +S+N L+  +P++I     L+ LDL  N L  +L
Sbjct: 468 LRLNGNRLSGTIPAEIGNLKSLNFLDMSSNRLVGPVPAAISGCASLEFLDLHSNALSGAL 527

Query: 465 PNEIGFLKELQRLILQSNQLVS--LPRAIGHLTNLSYLSVGENNLQS-IPEEIGTLENLH 521
           P+ +   + LQ + +  NQL     P +I  +  L+ L +G+N L   IP E+G+ E L 
Sbjct: 528 PDVM--PRTLQLVDVSDNQLAGPLRPSSIVSMQELTKLYLGKNRLTGGIPPELGSCEKLQ 585

Query: 522 TLYLNDNTCLNNIPFELALCSNLQI 546
            L L +N     IP EL    +L+I
Sbjct: 586 LLDLGENAFSGGIPAELGELPSLEI 610



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 211/440 (47%), Gaps = 22/440 (5%)

Query: 131 LYGNKLASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLRVLDLRHNKL-NELPMV 188
           L G   ASLP+       L  L L+  +LT  +P  L    +L  +DL  N+L   +P  
Sbjct: 92  LRGPLPASLPA------TLATLVLSGTNLTGPIPPELGAYSELTTVDLSKNQLTGAIPPE 145

Query: 189 VYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDL 246
           + +L+ L+ L L  N ++   PD +  L++L+ L++ DN++   +P  +G+LK L  +  
Sbjct: 146 LCRLSKLETLALNTNSLRGAIPDDLGDLASLTHLTLYDNELSGTIPGSIGKLKQLQVIRA 205

Query: 247 AHNHL--EELPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLES--VP 301
             N      LP EIG CT L  L L    +   +P+ +G L  L  L + Y  L S  +P
Sbjct: 206 GGNVALKGPLPSEIGGCTNLTMLGLAETGMSGSLPETIGRLEKLQTLAI-YTTLLSGRIP 264

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
           E++  C  L    +   +LS      L  L  +  + L +N+          Q   +  +
Sbjct: 265 ESIGNCTELANIYLYQNSLSGPIPPQLGRLRKLQTLLLWQNQLVGAIPPEIGQCEELTLM 324

Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQISK-LS 419
           +   N +       F R KNL ++ +  N LT ++P +L     LT++ +  N +S  + 
Sbjct: 325 DLSLNSLSGSIPASFGRLKNLQQLQLSTNRLTGAIPPELSNCTSLTDIEVDNNALSGDIR 384

Query: 420 EDIQNLVNLEVL-VLSNNLLKKLPSSIGNLRKLKCLDLEENKLES-LPNEIGFLKELQRL 477
            D   L +L +     N L   +P+S+     L+ +DL  N L   +P E+  L+ L +L
Sbjct: 385 LDFPKLPSLTLFYAWKNGLTGGVPASLAECASLQSVDLSYNNLTGPIPRELFALQNLTKL 444

Query: 478 ILQSNQLVS-LPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTLENLHTLYLNDNTCLNNIP 535
           +L  N+L   +P  IG+ T+L  L +  N L  +IP EIG L++L+ L ++ N  +  +P
Sbjct: 445 LLLENELSGFVPPDIGNCTSLYRLRLNGNRLSGTIPAEIGNLKSLNFLDMSSNRLVGPVP 504

Query: 536 FELALCSNLQIMSLDNCPLS 555
             ++ C++L+ + L +  LS
Sbjct: 505 AAISGCASLEFLDLHSNALS 524



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 201/425 (47%), Gaps = 66/425 (15%)

Query: 91  IEKEFLRCKEENILNLDLSKSSITH-LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTN 148
           I +    C E  + N+ L ++S++  +PP + +L  L+ L L+ N+L  ++P +IG    
Sbjct: 263 IPESIGNCTE--LANIYLYQNSLSGPIPPQLGRLRKLQTLLLWQNQLVGAIPPEIGQCEE 320

Query: 149 LTCLGLAENSLT-SLPDSLANLQQLRVLDLRHNKL-NELPMVVYKLTSLKILYLRFNRIK 206
           LT + L+ NSL+ S+P S   L+ L+ L L  N+L   +P  +   TSL  + +  N + 
Sbjct: 321 LTLMDLSLNSLSGSIPASFGRLKNLQQLQLSTNRLTGAIPPELSNCTSLTDIEVDNNALS 380

Query: 207 T-VHPDIQYLSNLSMLSMRDNKIRE-LPPELGELKNLVTLDLAHNHLEE----------- 253
             +  D   L +L++     N +   +P  L E  +L ++DL++N+L             
Sbjct: 381 GDIRLDFPKLPSLTLFYAWKNGLTGGVPASLAECASLQSVDLSYNNLTGPIPRELFALQN 440

Query: 254 --------------LPKEIGNCTMLVTLDLQHNELVN-IPDMLGNLINLTRLRLSYNRLE 298
                         +P +IGNCT L  L L  N L   IP  +GNL +L  L +S NRL 
Sbjct: 441 LTKLLLLENELSGFVPPDIGNCTSLYRLRLNGNRLSGTIPAEIGNLKSLNFLDMSSNRLV 500

Query: 299 S-VPETLSKCVHLNEFNVEGCALS-SLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFT 356
             VP  +S C  L   ++   ALS +LPD +  +L  ++   +S N+       GP + +
Sbjct: 501 GPVPAAISGCASLEFLDLHSNALSGALPDVMPRTLQLVD---VSDNQLA-----GPLRPS 552

Query: 357 SVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS-LPLDLGTWVGLTELNLGTNQI 415
           S+ S+                  + L+K+ +  N LT  +P +LG+   L  L+LG N  
Sbjct: 553 SIVSM------------------QELTKLYLGKNRLTGGIPPELGSCEKLQLLDLGENAF 594

Query: 416 SK-LSEDIQNLVNLEV-LVLS-NNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLK 472
           S  +  ++  L +LE+ L LS N L  ++P     L KL  LDL  N+L    + +  L+
Sbjct: 595 SGGIPAELGELPSLEISLNLSCNRLSGEIPPQFAGLDKLGSLDLSHNQLSGSLDPLAALQ 654

Query: 473 ELQRL 477
            L  L
Sbjct: 655 NLVAL 659



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 30/210 (14%)

Query: 116 LPPSVEKLTHLEELYLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTS-LPDSLANLQQLR 173
           +PP +   T L  L L GN+L  ++P++IG + +L  L ++ N L   +P +++    L 
Sbjct: 455 VPPDIGNCTSLYRLRLNGNRLSGTIPAEIGNLKSLNFLDMSSNRLVGPVPAAISGCASLE 514

Query: 174 VLDLRHNKL-------------------NEL-----PMVVYKLTSLKILYLRFNRI-KTV 208
            LDL  N L                   N+L     P  +  +  L  LYL  NR+   +
Sbjct: 515 FLDLHSNALSGALPDVMPRTLQLVDVSDNQLAGPLRPSSIVSMQELTKLYLGKNRLTGGI 574

Query: 209 HPDIQYLSNLSMLSMRDNKIRE-LPPELGELKNL-VTLDLAHNHLE-ELPKEIGNCTMLV 265
            P++     L +L + +N     +P ELGEL +L ++L+L+ N L  E+P +      L 
Sbjct: 575 PPELGSCEKLQLLDLGENAFSGGIPAELGELPSLEISLNLSCNRLSGEIPPQFAGLDKLG 634

Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYN 295
           +LDL HN+L    D L  L NL  L +S+N
Sbjct: 635 SLDLSHNQLSGSLDPLAALQNLVALNVSFN 664



 Score = 42.7 bits (99), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 4/102 (3%)

Query: 464 LPNEIGFLKELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTLENLH 521
           +P E+G   EL  + L  NQL  ++P  +  L+ L  L++  N+L+ +IP+++G L +L 
Sbjct: 118 IPPELGAYSELTTVDLSKNQLTGAIPPELCRLSKLETLALNTNSLRGAIPDDLGDLASLT 177

Query: 522 TLYLNDNTCLNNIPFELALCSNLQIM-SLDNCPL-SQIPSEI 561
            L L DN     IP  +     LQ++ +  N  L   +PSEI
Sbjct: 178 HLTLYDNELSGTIPGSIGKLKQLQVIRAGGNVALKGPLPSEI 219


>gi|291234857|ref|XP_002737364.1| PREDICTED: leucine rich repeat containing 7-like, partial
           [Saccoglossus kowalevskii]
          Length = 1578

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 209/407 (51%), Gaps = 15/407 (3%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKL-TS 194
           L+ LP    Y+T+        +  TS       + +++VLD +H  L  +P  +Y+   S
Sbjct: 264 LSHLPGPDKYLTSFIMPRGCPSCFTS------QVDEIKVLDFKHCNLLFVPEEIYEFEKS 317

Query: 195 LKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           L+ LYL  N IK +   + +  NL  L   DN++  LPP +  L NL  LD++ N + +L
Sbjct: 318 LEELYLDSNNIKDLPRPLFHCHNLRKLGASDNELCVLPPAIASLVNLEELDISKNGIMDL 377

Query: 255 PKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
           P  I  C  L  ++L  N +  +PD    L+NLT L L+   L+ +P    + V L    
Sbjct: 378 PDNIKCCKTLNMVELSVNPIGKLPDGFTQLLNLTHLYLNDTFLDYLPANFGRLVKLKILE 437

Query: 315 VEGCALSSLPD--GLLSSLTSINNITLSRNKFTAYPS--GGPTQFTSVYSINFEHNQIDK 370
           +    L SLP    ++ +L ++  + +  N  +  PS  G       +   +   N+I+ 
Sbjct: 438 IRENHLKSLPKYPEVVGTLVNLTELWVDSNTLSKIPSFIG---NLKRLQYFDGSKNKIES 494

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           +P  +    ++L+ +++  N L  LP  +G    L+ L +  NQ+S L   I  ++++E 
Sbjct: 495 LPPEV-DGLESLTDMHLSTNCLKLLPESIGKLSKLSTLKVDDNQLSMLPYSIGGMISMEE 553

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA 490
           L+L+ N L++LP SIG LR ++ L++++N L  LP+E+G    ++ L L+ N+L  LP  
Sbjct: 554 LILNMNDLQELPPSIGLLRNIRHLNVDDNLLFDLPSELGSCSHIRLLSLRGNKLEVLPDE 613

Query: 491 IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFE 537
           +G ++ L+ +++  N L+ +P     L+NL  L+L+DN     IP +
Sbjct: 614 LGRISRLTVVNLSNNRLKYLPFNFCKLKNLQALWLSDNQSKPLIPLQ 660



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 174/386 (45%), Gaps = 48/386 (12%)

Query: 126 LEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNEL 185
           LEELYL  N +  LP  + +  NL  LG ++N L  LP ++A+L  L  LD+  N + +L
Sbjct: 318 LEELYLDSNNIKDLPRPLFHCHNLRKLGASDNELCVLPPAIASLVNLEELDISKNGIMDL 377

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  +    +L ++ L  N I  +      L NL+ L + D  +  LP   G L  L  L+
Sbjct: 378 PDNIKCCKTLNMVELSVNPIGKLPDGFTQLLNLTHLYLNDTFLDYLPANFGRLVKLKILE 437

Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
           +  NHL+ LPK                     P+++G L+NLT L +  N L  +P  + 
Sbjct: 438 IRENHLKSLPK--------------------YPEVVGTLVNLTELWVDSNTLSKIPSFIG 477

Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEH 365
               L  F+     + SLP   +  L S+ ++ LS N     P                 
Sbjct: 478 NLKRLQYFDGSKNKIESLPP-EVDGLESLTDMHLSTNCLKLLPES--------------- 521

Query: 366 NQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNL 425
                       +   LS + + DN L+ LP  +G  + + EL L  N + +L   I  L
Sbjct: 522 ----------IGKLSKLSTLKVDDNQLSMLPYSIGGMISMEELILNMNDLQELPPSIGLL 571

Query: 426 VNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLV 485
            N+  L + +NLL  LPS +G+   ++ L L  NKLE LP+E+G +  L  + L +N+L 
Sbjct: 572 RNIRHLNVDDNLLFDLPSELGSCSHIRLLSLRGNKLEVLPDELGRISRLTVVNLSNNRLK 631

Query: 486 SLPRAIGHLTNLSYLSVGENNLQSIP 511
            LP     L NL  L + +N  QS P
Sbjct: 632 YLPFNFCKLKNLQALWLSDN--QSKP 655



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 165/335 (49%), Gaps = 31/335 (9%)

Query: 231 LPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTR 289
           +P E+ E  K+L  L L  N++++LP+ + +C  L  L    NEL  +P  + +L+NL  
Sbjct: 307 VPEEIYEFEKSLEELYLDSNNIKDLPRPLFHCHNLRKLGASDNELCVLPPAIASLVNLEE 366

Query: 290 LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS 349
           L +S N +  +P+ +  C  LN   +    +  LPDG                       
Sbjct: 367 LDISKNGIMDLPDNIKCCKTLNMVELSVNPIGKLPDGF---------------------- 404

Query: 350 GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLD---LGTWVGLT 406
              TQ  ++  +      +D +P   F R   L  + +++N L SLP     +GT V LT
Sbjct: 405 ---TQLLNLTHLYLNDTFLDYLPAN-FGRLVKLKILEIRENHLKSLPKYPEVVGTLVNLT 460

Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
           EL + +N +SK+   I NL  L+    S N ++ LP  +  L  L  + L  N L+ LP 
Sbjct: 461 ELWVDSNTLSKIPSFIGNLKRLQYFDGSKNKIESLPPEVDGLESLTDMHLSTNCLKLLPE 520

Query: 467 EIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLN 526
            IG L +L  L +  NQL  LP +IG + ++  L +  N+LQ +P  IG L N+  L ++
Sbjct: 521 SIGKLSKLSTLKVDDNQLSMLPYSIGGMISMEELILNMNDLQELPPSIGLLRNIRHLNVD 580

Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           DN  L ++P EL  CS+++++SL    L  +P E+
Sbjct: 581 DN-LLFDLPSELGSCSHIRLLSLRGNKLEVLPDEL 614



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 124/235 (52%), Gaps = 26/235 (11%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQ---IGYVTNLTCLGLAENS 158
           N+ +L L+ + + +LP +  +L  L+ L +  N L SLP     +G + NLT L +  N+
Sbjct: 409 NLTHLYLNDTFLDYLPANFGRLVKLKILEIRENHLKSLPKYPEVVGTLVNLTELWVDSNT 468

Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
           L+ +P  + NL++L+  D   NK+  LP  V  L SL  ++L  N +K +   I  LS L
Sbjct: 469 LSKIPSFIGNLKRLQYFDGSKNKIESLPPEVDGLESLTDMHLSTNCLKLLPESIGKLSKL 528

Query: 219 SMLSMRDNKI-----------------------RELPPELGELKNLVTLDLAHNHLEELP 255
           S L + DN++                       +ELPP +G L+N+  L++  N L +LP
Sbjct: 529 STLKVDDNQLSMLPYSIGGMISMEELILNMNDLQELPPSIGLLRNIRHLNVDDNLLFDLP 588

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHL 310
            E+G+C+ +  L L+ N+L  +PD LG +  LT + LS NRL+ +P    K  +L
Sbjct: 589 SELGSCSHIRLLSLRGNKLEVLPDELGRISRLTVVNLSNNRLKYLPFNFCKLKNL 643



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 105/195 (53%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
           N+  L +  ++++ +P  +  L  L+      NK+ SLP ++  + +LT + L+ N L  
Sbjct: 458 NLTELWVDSNTLSKIPSFIGNLKRLQYFDGSKNKIESLPPEVDGLESLTDMHLSTNCLKL 517

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP+S+  L +L  L +  N+L+ LP  +  + S++ L L  N ++ + P I  L N+  L
Sbjct: 518 LPESIGKLSKLSTLKVDDNQLSMLPYSIGGMISMEELILNMNDLQELPPSIGLLRNIRHL 577

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
           ++ DN + +LP ELG   ++  L L  N LE LP E+G  + L  ++L +N L  +P   
Sbjct: 578 NVDDNLLFDLPSELGSCSHIRLLSLRGNKLEVLPDELGRISRLTVVNLSNNRLKYLPFNF 637

Query: 282 GNLINLTRLRLSYNR 296
             L NL  L LS N+
Sbjct: 638 CKLKNLQALWLSDNQ 652



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 91/154 (59%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
           E++ ++ LS + +  LP S+ KL+ L  L +  N+L+ LP  IG + ++  L L  N L 
Sbjct: 503 ESLTDMHLSTNCLKLLPESIGKLSKLSTLKVDDNQLSMLPYSIGGMISMEELILNMNDLQ 562

Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
            LP S+  L+ +R L++  N L +LP  +   + +++L LR N+++ +  ++  +S L++
Sbjct: 563 ELPPSIGLLRNIRHLNVDDNLLFDLPSELGSCSHIRLLSLRGNKLEVLPDELGRISRLTV 622

Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEEL 254
           +++ +N+++ LP    +LKNL  L L+ N  + L
Sbjct: 623 VNLSNNRLKYLPFNFCKLKNLQALWLSDNQSKPL 656



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 69/128 (53%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L +  + ++ LP S+  +  +EEL L  N L  LP  IG + N+  L + +N L  LP  
Sbjct: 531 LKVDDNQLSMLPYSIGGMISMEELILNMNDLQELPPSIGLLRNIRHLNVDDNLLFDLPSE 590

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L +   +R+L LR NKL  LP  + +++ L ++ L  NR+K +  +   L NL  L + D
Sbjct: 591 LGSCSHIRLLSLRGNKLEVLPDELGRISRLTVVNLSNNRLKYLPFNFCKLKNLQALWLSD 650

Query: 226 NKIRELPP 233
           N+ + L P
Sbjct: 651 NQSKPLIP 658


>gi|28317202|gb|AAO39608.1| GH22674p, partial [Drosophila melanogaster]
          Length = 647

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 154/551 (27%), Positives = 249/551 (45%), Gaps = 63/551 (11%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           L I++E     +  + NLDLS +++TH+ P +E L  L  L L+ N L  LP +IG +  
Sbjct: 98  LTIKEEDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEK 157

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L ++ N L+ LP ++ +L +LR L++ +N+  EL   +  L  L+ L    N I+++
Sbjct: 158 LVRLNVSHNKLSQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSL 217

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
              I +L  L+ L +  N I+ELPP+L  +++L  +DL HN L  LP+++G    L  L 
Sbjct: 218 PGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLY 277

Query: 269 LQHNELVNIPDMLGN--------------------LINLTRLRL---------------- 292
           LQHN+++ +P+  GN                      NL  L++                
Sbjct: 278 LQHNDILELPEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELC 337

Query: 293 ----------SYNRLESVPETLSKCVHLNEFNVEGCALSSLP-DGLLSSLTSINNITLSR 341
                     S N +  +P TLS   HL    VEG  + ++  D L    T I      R
Sbjct: 338 LLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRILKTLHDR 397

Query: 342 NKFTAYPSGGPTQFTSVYS----INFEHNQIDK--IPYGIFSRAKNLSKVNMKDNL--LT 393
               A   GG     S  +          Q+D   IP     R K      +  NL  LT
Sbjct: 398 AVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFPDRYKLRHTRTLAVNLEELT 457

Query: 394 SLP---LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV-LVLSNNLLKKLPSSIGNLR 449
           S+P     +    G+  ++   NQ+S L   +Q++ +L   LVLSNN++  +P  I    
Sbjct: 458 SVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQFT 517

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
           ++  L+L  N L  LP E G L  L+ L + +N+   +P  +  L  L  L   EN+++ 
Sbjct: 518 RISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHIKM 577

Query: 510 IPEEIGTLENLHTLYLND--NTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPS 567
           +   +  L+N+  L   D  N  +  +P  L   +N+  + L   P  Q   +I++ G  
Sbjct: 578 L--NVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTD 635

Query: 568 LIIRYLKMQGP 578
            I+ YL+ + P
Sbjct: 636 AIMSYLRDRIP 646


>gi|391336550|ref|XP_003742642.1| PREDICTED: LOW QUALITY PROTEIN: protein lap4-like [Metaseiulus
           occidentalis]
          Length = 1488

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 200/393 (50%), Gaps = 27/393 (6%)

Query: 136 LASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
           L ++P +IG   +L  L L  N +  LP  L  LQ+LRV     N++ E+P  +     L
Sbjct: 26  LVAVPEEIGRYRSLEQLALNSNHIKELPKHLFRLQKLRVFTASDNEIQEIPQDIGAWQLL 85

Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
           + L L  N I  +   +++L NL +L +  N +   P  L +LKNL  L L    L  LP
Sbjct: 86  QELDLSKNDISDIPEGLRHLRNLQLLDLSQNCLYRTPDFLVDLKNLNALYLNDVALAALP 145

Query: 256 KEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNV 315
              G  + L  L+L+ N L N+PD  G L +L RL L  N +E +   + +   L E  +
Sbjct: 146 VAFGMLSSLTILELRDNSLKNLPDSFGQLKHLERLDLGSNEIEELSPVIGRLESLEELWL 205

Query: 316 EGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGI 375
           +   LS LP G +  L+ +  + +S ++  A P                 N+I       
Sbjct: 206 DCNPLSRLP-GDIGKLSRLKCLDVSESRLEALP-----------------NEI------- 240

Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
             +  +LS + +  NLLT LP D+G    LT L +  N IS + + +    +L+ L+L++
Sbjct: 241 -CQLSSLSDLLLSQNLLTKLPKDIGKLRTLTILKVDQNHISHIPDSLGYCESLQELILTD 299

Query: 436 NLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLT 495
           N L ++P  IGNL KL  L+++ N L+ LP +IG L++L  L L+ N+L  LP  IG+L+
Sbjct: 300 NELTQVPPDIGNLTKLTNLNIDRNLLQRLPPDIGKLEKLTMLSLRENRLSELPLEIGNLS 359

Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           +L  + +  N L+++P  + +L  L  L+L +N
Sbjct: 360 SLHVMDISGNRLKNLPISMASLR-LKALWLAEN 391



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 180/398 (45%), Gaps = 96/398 (24%)

Query: 207 TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
            V  +I    +L  L++  N I+ELP  L  L+ L     + N ++E+P++IG   +L  
Sbjct: 28  AVPEEIGRYRSLEQLALNSNHIKELPKHLFRLQKLRVFTASDNEIQEIPQDIGAWQLLQE 87

Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
           LDL  N++ +IP+ L +L NL  L LS N L   P+ L    +LN   +   AL++LP  
Sbjct: 88  LDLSKNDISDIPEGLRHLRNLQLLDLSQNCLYRTPDFLVDLKNLNALYLNDVALAALP-- 145

Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
                                                       + +G+ S   +L+ + 
Sbjct: 146 --------------------------------------------VAFGMLS---SLTILE 158

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           ++DN L +LP   G    L  L+LG+N+I +LS  I  L +LE L L  N L +LP  IG
Sbjct: 159 LRDNSLKNLPDSFGQLKHLERLDLGSNEIEELSPVIGRLESLEELWLDCNPLSRLPGDIG 218

Query: 447 NLRKLKCLDLEENKLESLPNEI-------------------------------------- 468
            L +LKCLD+ E++LE+LPNEI                                      
Sbjct: 219 KLSRLKCLDVSESRLEALPNEICQLSSLSDLLLSQNLLTKLPKDIGKLRTLTILKVDQNH 278

Query: 469 --------GFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
                   G+ + LQ LIL  N+L  +P  IG+LT L+ L++  N LQ +P +IG LE L
Sbjct: 279 ISHIPDSLGYCESLQELILTDNELTQVPPDIGNLTKLTNLNIDRNLLQRLPPDIGKLEKL 338

Query: 521 HTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
             L L +N  L+ +P E+   S+L +M +    L  +P
Sbjct: 339 TMLSLRENR-LSELPLEIGNLSSLHVMDISGNRLKNLP 375



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 185/380 (48%), Gaps = 31/380 (8%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           L L+ + I  LP  + +L  L       N++  +P  IG    L  L L++N ++ +P+ 
Sbjct: 42  LALNSNHIKELPKHLFRLQKLRVFTASDNEIQEIPQDIGAWQLLQELDLSKNDISDIPEG 101

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L +L+ L++LDL  N L   P  +  L +L  LYL    +  +      LS+L++L +RD
Sbjct: 102 LRHLRNLQLLDLSQNCLYRTPDFLVDLKNLNALYLNDVALAALPVAFGMLSSLTILELRD 161

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N ++ LP   G+LK+L  LDL  N +EEL   IG    L  L L  N L  +P  +G L 
Sbjct: 162 NSLKNLPDSFGQLKHLERLDLGSNEIEELSPVIGRLESLEELWLDCNPLSRLPGDIGKLS 221

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLTSINNITLSRNK 343
            L  L +S +RLE++P  + +   L++  +    L+ LP   G L +LT           
Sbjct: 222 RLKCLDVSESRLEALPNEICQLSSLSDLLLSQNLLTKLPKDIGKLRTLT----------- 270

Query: 344 FTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWV 403
                            +  + N I  IP  +    ++L ++ + DN LT +P D+G   
Sbjct: 271 ----------------ILKVDQNHISHIPDSL-GYCESLQELILTDNELTQVPPDIGNLT 313

Query: 404 GLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES 463
            LT LN+  N + +L  DI  L  L +L L  N L +LP  IGNL  L  +D+  N+L++
Sbjct: 314 KLTNLNIDRNLLQRLPPDIGKLEKLTMLSLRENRLSELPLEIGNLSSLHVMDISGNRLKN 373

Query: 464 LPNEIGFLKELQRLILQSNQ 483
           LP  +  L+ L+ L L  NQ
Sbjct: 374 LPISMASLR-LKALWLAENQ 392



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 103/205 (50%), Gaps = 24/205 (11%)

Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
           + + +V+   + L ++P ++G +  L +L L +N I +L + +  L  L V   S+N ++
Sbjct: 14  RRVERVDRSHSNLVAVPEEIGRYRSLEQLALNSNHIKELPKHLFRLQKLRVFTASDNEIQ 73

Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN----------------- 482
           ++P  IG  + L+ LDL +N +  +P  +  L+ LQ L L  N                 
Sbjct: 74  EIPQDIGAWQLLQELDLSKNDISDIPEGLRHLRNLQLLDLSQNCLYRTPDFLVDLKNLNA 133

Query: 483 ------QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
                  L +LP A G L++L+ L + +N+L+++P+  G L++L  L L  N      P 
Sbjct: 134 LYLNDVALAALPVAFGMLSSLTILELRDNSLKNLPDSFGQLKHLERLDLGSNEIEELSPV 193

Query: 537 ELALCSNLQIMSLDNCPLSQIPSEI 561
            +    +L+ + LD  PLS++P +I
Sbjct: 194 -IGRLESLEELWLDCNPLSRLPGDI 217



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 1/117 (0%)

Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
           G+ R+++ +D   + L ++P EIG  + L++L L SN +  LP+ +  L  L   +  +N
Sbjct: 11  GSNRRVERVDRSHSNLVAVPEEIGRYRSLEQLALNSNHIKELPKHLFRLQKLRVFTASDN 70

Query: 506 NLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIV 562
            +Q IP++IG  + L  L L+ N  +++IP  L    NLQ++ L    L + P  +V
Sbjct: 71  EIQEIPQDIGAWQLLQELDLSKND-ISDIPEGLRHLRNLQLLDLSQNCLYRTPDFLV 126


>gi|390475905|ref|XP_002807686.2| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog
           [Callithrix jacchus]
          Length = 1471

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 127/390 (32%), Positives = 196/390 (50%), Gaps = 6/390 (1%)

Query: 95  FLRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLG 153
             RC   ++ ++D    S+  +P  + + +  LEEL L  N+L  LP     + NL  LG
Sbjct: 7   LWRCNR-HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLG 65

Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
           L++N +  LP  +AN  QL  LD+  N + E+P  +    +L+I     N +  +     
Sbjct: 66  LSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFT 125

Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNE 273
            L +L+ L++ D  ++ LP ++G L NLVTL+L  N L+ LP  +     L  LDL  N+
Sbjct: 126 QLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185

Query: 274 LVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTS 333
           L  +PD LG L NL  L L  N+L ++P  L     L   +V    L  LP   L  L  
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELP-AELGGLVL 244

Query: 334 INNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLT 393
           + ++ LS+N     P  G  Q   +  +  + N++ ++   I    +NLS++ + +NLL 
Sbjct: 245 LTDLLLSQNLLQRLPD-GIGQLKQLSILKVDQNRLCEVTEAIGD-CENLSELILTENLLM 302

Query: 394 SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKC 453
           +LP  LG    LT LN+  NQ+  L  +I   V L VL L +N L  LP  + +  +L  
Sbjct: 303 ALPRSLGKLTKLTNLNVDRNQLEALPSEIGGCVALSVLSLRDNRLAVLPPELAHTSELHV 362

Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQ 483
           LD+  N+L+SLP  +  L  L+ L L  NQ
Sbjct: 363 LDVAGNRLQSLPFALTHLN-LKALWLAENQ 391



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 173/387 (44%), Gaps = 72/387 (18%)

Query: 175 LDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
           +D RH  L  +P  +Y+                      Y  +L  L +  N++RELP  
Sbjct: 17  VDKRHCSLQAVPEEIYR----------------------YSRSLEELLLDANQLRELPKP 54

Query: 235 LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSY 294
              L NL  L L+ N ++ LP E+ N   LV LD+  N   +IP+               
Sbjct: 55  FFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRN---DIPE--------------- 96

Query: 295 NRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQ 354
                +PE++  C  L   +  G  LS LPDG  + L S+ ++ L+     A P      
Sbjct: 97  -----IPESIKFCKALEIADFSGNPLSRLPDGF-TQLRSLAHLALNDVSLQALP------ 144

Query: 355 FTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQ 414
                              G      NL  + +++NLL SLP  L   V L +L+LG N 
Sbjct: 145 -------------------GDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185

Query: 415 ISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
           +  L + +  L NL  L L  N L  LP  +GNLR+L CLD+ EN+LE LP E+G L  L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
             L+L  N L  LP  IG L  LS L V +N L  + E IG  ENL  L L +N  L  +
Sbjct: 246 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTEN-LLMAL 304

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEI 561
           P  L   + L  +++D   L  +PSEI
Sbjct: 305 PRSLGKLTKLTNLNVDRNQLEALPSEI 331



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 107/319 (33%), Positives = 164/319 (51%), Gaps = 8/319 (2%)

Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
            ++ LD+S++ I  +P S++    LE     GN L+ LP     + +L  L L + SL +
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
           LP  + NL  L  L+LR N L  LP  +  L  L+ L L  N ++ +   +  L NL  L
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
            +  N++  LPPELG L+ LV LD++ N LEELP E+G   +L  L L  N L  +PD +
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGI 262

Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
           G L  L+ L++  NRL  V E +  C +L+E  +    L +LP   L  LT + N+ + R
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRS-LGKLTKLTNLNVDR 321

Query: 342 NKFTAYPS--GGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
           N+  A PS  GG     ++  ++   N++  +P  + +    L  +++  N L SLP  L
Sbjct: 322 NQLEALPSEIGG---CVALSVLSLRDNRLAVLPPEL-AHTSELHVLDVAGNRLQSLPFAL 377

Query: 400 GTWVGLTELNLGTNQISKL 418
            T + L  L L  NQ   +
Sbjct: 378 -THLNLKALWLAENQAQPM 395


>gi|195452978|ref|XP_002073584.1| GK13066 [Drosophila willistoni]
 gi|194169669|gb|EDW84570.1| GK13066 [Drosophila willistoni]
          Length = 650

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 156/577 (27%), Positives = 251/577 (43%), Gaps = 111/577 (19%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           L I++E     +  I NLDLS ++++ L P +E L  L  L L+ N L  LP QIG +  
Sbjct: 97  LCIKEEDAWWNQVPITNLDLSSNTLSRLSPKIENLMTLTVLILHDNALVELPPQIGKLEK 156

Query: 149 LTCLGLAENSLTSLPDSL-----------------------ANLQQLRVLDLRHNKLNEL 185
           LT L L+ N L+ LP  L                       ++L  L  LD  HNKL  L
Sbjct: 157 LTRLNLSHNKLSQLPRELFSLPVLRHLNISYNEFTELNPDVSDLHMLEWLDASHNKLQSL 216

Query: 186 PMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLD 245
           P  +  L  L  L L +N IK + PD+  +  L  L +  N I +LP ++G ++ L  L 
Sbjct: 217 PGGIGFLVRLTSLLLPYNHIKELPPDLVNMRVLQKLDLMQNDIIKLPDDMGLIRKLECLY 276

Query: 246 LAHNHLEELPKEIGN--------------------CT---MLVTLDLQHNELVNIPDMLG 282
           + HN ++ELP+  GN                    CT    L   DL+ N++  +PD + 
Sbjct: 277 IQHNDIKELPEFEGNEALTEVHASNNYITSIPKGLCTNLPHLKIFDLRDNQITQLPDEVC 336

Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
            L NL RL +S N +  +P TLS   HL    VEG  + ++   ++   T+   + + ++
Sbjct: 337 LLRNLQRLDVSNNSISVLPVTLSSLAHLVNLQVEGNPIKTIRRDIIQCGTT-RILKVLQD 395

Query: 343 KFTAYP-------------------------SGG-------PTQFTSVYSINFEHN---- 366
           +  A P                          GG       P  F   Y +   H     
Sbjct: 396 RAQAQPKEKGGANGGSGSGGSLTETMDALRLGGGQTNDGIMPENFPDRYKLRHTHTLAVN 455

Query: 367 --QIDKIPYGIF--SRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             ++  +P  +F  +R++N++ V+   N L +LP  L                    + +
Sbjct: 456 LEELTNVPDQVFEIARSENVNVVDFARNKLGTLPNGL--------------------QYM 495

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
           ++LV  + LVLS+NL+  +P  I    ++  L+L  N L+ LP E G L  L+ L + +N
Sbjct: 496 RDLV--KELVLSHNLISFVPQFISQFTRITFLNLSNNLLKELPKEFGVLNTLRELNIANN 553

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSI-PEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
           +   +P  +  L  L  L   EN+++ +    +  +  L TL L +N  +  IP  L   
Sbjct: 554 RFDCIPSCLYELQRLEILVASENHIKELNVSGLKAMSCLATLDLRNND-IEFIPPILGNL 612

Query: 542 SNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGP 578
           +N+  + L   P  Q   +I++ G   I+ YL+ + P
Sbjct: 613 TNITHLELIGNPFRQPRHQILIKGTESIMSYLRDRIP 649


>gi|410037727|ref|XP_516869.3| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Pan troglodytes]
          Length = 573

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 145/520 (27%), Positives = 222/520 (42%), Gaps = 101/520 (19%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +D S  S+T +P  +   T LEE++L  N++  +P +I  + N+  L L +N+L SL  +
Sbjct: 43  IDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPA 102

Query: 166 ------------------------LANLQQLRVLDLRHNKLNELPMVVYK---------- 191
                                   ++ L  LR L L    L E+P+V+ K          
Sbjct: 103 LGLLSSLESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVICKNLHHLELLGL 162

Query: 192 --------------LTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGE 237
                          T L+ +YL+ N+ +    ++  L  L ++ + +NKI  +P E+G 
Sbjct: 163 TGNHLKCLPKEIVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPEEIGH 222

Query: 238 LKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRL 297
           L  L    +A N+L  LP  +  C+ L  LDL HN L +IP  L  L  +T + LS NRL
Sbjct: 223 LTGLQKFYMASNNLPVLPASLCQCSQLSVLDLSHNLLHSIPKSLAELRKMTEIGLSGNRL 282

Query: 298 ESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTS 357
           E VP  +             C  +SL       L  + N  L R +      G      +
Sbjct: 283 EKVPRLI-------------CRWTSL------HLLYLGNTGLHRLR------GSFRCLVN 317

Query: 358 VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISK 417
           +  ++   N +D  P  I +  KNL  + + DN +  LP +LG+   L  L L  N+   
Sbjct: 318 LRFLDLSQNHLDHCPLQICA-LKNLEVLGLDDNKIGQLPSELGSLSKLKILGLTGNEFLS 376

Query: 418 LSEDIQNLVNLEVLVLSNNLLKKL---PSSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
             E++ +L +LE L +  +   KL   P  I  L+ LK L +E N LE LP  +G +  L
Sbjct: 377 FPEEVLSLASLEKLYIGQDQGFKLTYVPEHIRKLQSLKELYIENNHLEYLPVSLGSMPNL 436

Query: 475 QRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNI 534
           + L  + N L  LP AI     L  L + +N L  +PE + +L NL  L L DN      
Sbjct: 437 EVLDCRHNLLKQLPDAICQAQALKELRLEDNLLTHLPENLDSLVNLKVLTLMDN------ 490

Query: 535 PFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLK 574
                             P+ + P E+   G   I +YLK
Sbjct: 491 ------------------PMEEPPKEVCAEGNEAIWKYLK 512


>gi|220942590|gb|ACL83838.1| CG9611-PB [synthetic construct]
          Length = 651

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 154/553 (27%), Positives = 250/553 (45%), Gaps = 63/553 (11%)

Query: 89  LNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTN 148
           L I++E     +  + NLDLS +++TH+ P +E L  L  L L+ N L  LP +IG +  
Sbjct: 101 LTIKEEDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEK 160

Query: 149 LTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTV 208
           L  L ++ N L+ LP ++ +L +LR L++ +N+  EL   +  L  L+ L    N I+++
Sbjct: 161 LVRLNVSHNKLSQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSL 220

Query: 209 HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLD 268
              I +L  L+ L +  N I+ELPP+L  +++L  +DL HN L  LP+++G    L  L 
Sbjct: 221 PGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLY 280

Query: 269 LQHNELVNIPDMLGN--------------------LINLTRLRL---------------- 292
           LQHN+++ +P+  GN                      NL  L++                
Sbjct: 281 LQHNDILELPEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELC 340

Query: 293 ----------SYNRLESVPETLSKCVHLNEFNVEGCALSSLP-DGLLSSLTSINNITLSR 341
                     S N +  +P TLS   HL    VEG  + ++  D L    T I      R
Sbjct: 341 LLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRILKTLHDR 400

Query: 342 NKFTAYPSGGPTQFTSVYS----INFEHNQIDK--IPYGIFSRAKNLSKVNMKDNL--LT 393
               A   GG     S  +          Q+D   IP     R K      +  NL  LT
Sbjct: 401 AVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFPDRYKLRHTRTLAVNLEELT 460

Query: 394 SLP---LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV-LVLSNNLLKKLPSSIGNLR 449
           S+P     +    G+  ++   NQ+S L   +Q++ +L   LVLSNN++  +P  I    
Sbjct: 461 SVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQFT 520

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
           ++  L+L  N L  LP E G L  L+ L + +N+   +P  +  L  L  L   EN+++ 
Sbjct: 521 RISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHIKM 580

Query: 510 IPEEIGTLENLHTLYLND--NTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPS 567
           +   +  L+N+  L   D  N  +  +P  L   +N+  + L   P  Q   +I++ G  
Sbjct: 581 L--NVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTD 638

Query: 568 LIIRYLKMQGPYR 580
            I+ YL+ + P +
Sbjct: 639 AIMSYLRDRIPTK 651


>gi|118404770|ref|NP_001072594.1| leucine rich repeat containing 7 [Xenopus (Silurana) tropicalis]
 gi|114108005|gb|AAI22963.1| densin-180 [Xenopus (Silurana) tropicalis]
          Length = 1388

 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 180/368 (48%), Gaps = 51/368 (13%)

Query: 218 LSMLSMRDNKIRELPPELGEL-KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
           +S+L      ++++P E+  L + L  L L  N +EELPK++ +C  L  L +Q N+L N
Sbjct: 37  ISVLDYSHCSLQQVPKEVFSLERTLEELYLDANQIEELPKQLFSCQALRKLSIQDNDLSN 96

Query: 277 IPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINN 336
           +P  + +L+NL  L +S N ++  PE +  C  L         +S LPDG          
Sbjct: 97  LPTTIASLVNLKELDISKNGIQEFPENIKCCKCLTIVEASVNPISKLPDGF--------- 147

Query: 337 ITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
                           TQ  ++  +      ++ +P   F R   L  + +++N L +LP
Sbjct: 148 ----------------TQLLNLTQLYLNDAFLEYLPAN-FGRLSKLRILELRENHLKTLP 190

Query: 397 LDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
             +     L  L+LG N+ ++L E ++ + NL+ L + NN L+ LP + G L++L  LD+
Sbjct: 191 KSMSKLAQLERLDLGNNEFTELPEGLELIQNLKELWIDNNSLQTLPGATGKLKQLIYLDM 250

Query: 457 EENKLESL-----------------------PNEIGFLKELQRLILQSNQLVSLPRAIGH 493
            +N++ES+                       P+ IG LK+L  L +  NQLV+LP  IG+
Sbjct: 251 SKNRIESVDTDISGCESLEDLLLSSNLLQQLPDSIGLLKKLTNLKVDDNQLVALPNTIGN 310

Query: 494 LTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCP 553
           L+ L       N L+S+P  IG L +L TL +++N  L  +P E+  C N+ +MSL    
Sbjct: 311 LSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDEN-FLTELPREIGNCKNVTVMSLRTNK 369

Query: 554 LSQIPSEI 561
           L  +P EI
Sbjct: 370 LEFLPEEI 377



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 195/388 (50%), Gaps = 28/388 (7%)

Query: 172 LRVLDLRHNKLNELPMVVYKL-TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
           + VLD  H  L ++P  V+ L  +L+ LYL  N+I+ +   +     L  LS++DN +  
Sbjct: 37  ISVLDYSHCSLQQVPKEVFSLERTLEELYLDANQIEELPKQLFSCQALRKLSIQDNDLSN 96

Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
           LP  +  L NL  LD++ N ++E P+ I  C  L  ++   N +  +PD    L+NLT+L
Sbjct: 97  LPTTIASLVNLKELDISKNGIQEFPENIKCCKCLTIVEASVNPISKLPDGFTQLLNLTQL 156

Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
            L+   LE +P    +   L    +    L +LP  + S L  +  + L  N+FT  P G
Sbjct: 157 YLNDAFLEYLPANFGRLSKLRILELRENHLKTLPKSM-SKLAQLERLDLGNNEFTELPEG 215

Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
                                        +NL ++ + +N L +LP   G    L  L++
Sbjct: 216 -------------------------LELIQNLKELWIDNNSLQTLPGATGKLKQLIYLDM 250

Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
             N+I  +  DI    +LE L+LS+NLL++LP SIG L+KL  L +++N+L +LPN IG 
Sbjct: 251 SKNRIESVDTDISGCESLEDLLLSSNLLQQLPDSIGLLKKLTNLKVDDNQLVALPNTIGN 310

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           L  L+      N+L SLP  IG+L +L  L+V EN L  +P EIG  +N+  + L  N  
Sbjct: 311 LSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLTELPREIGNCKNVTVMSLRTNK- 369

Query: 531 LNNIPFELALCSNLQIMSLDNCPLSQIP 558
           L  +P E+     L++++L +  L  +P
Sbjct: 370 LEFLPEEIGQMQKLRVLNLSDNRLKNLP 397



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 194/418 (46%), Gaps = 54/418 (12%)

Query: 96  LRCKEENILNLDLSKSSITHLPPSVEKLTH-LEELYLYGNKLASLPSQIGYVTNLTCLGL 154
            R +EE I  LD S  S+  +P  V  L   LEELYL  N++  LP Q+     L  L +
Sbjct: 30  FRGEEEIISVLDYSHCSLQQVPKEVFSLERTLEELYLDANQIEELPKQLFSCQALRKLSI 89

Query: 155 AENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVV-----------------------YK 191
            +N L++LP ++A+L  L+ LD+  N + E P  +                        +
Sbjct: 90  QDNDLSNLPTTIASLVNLKELDISKNGIQEFPENIKCCKCLTIVEASVNPISKLPDGFTQ 149

Query: 192 LTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHL 251
           L +L  LYL    ++ +  +   LS L +L +R+N ++ LP  + +L  L  LDL +N  
Sbjct: 150 LLNLTQLYLNDAFLEYLPANFGRLSKLRILELRENHLKTLPKSMSKLAQLERLDLGNNEF 209

Query: 252 EELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLN 311
            ELP+ +     L  L + +N L  +P   G L  L  L +S NR+ESV   +S C  L 
Sbjct: 210 TELPEGLELIQNLKELWIDNNSLQTLPGATGKLKQLIYLDMSKNRIESVDTDISGCESLE 269

Query: 312 EFNVEGCALSSLPD--GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQID 369
           +  +    L  LPD  GLL  LT   N+ +  N+  A P                 N I 
Sbjct: 270 DLLLSSNLLQQLPDSIGLLKKLT---NLKVDDNQLVALP-----------------NTIG 309

Query: 370 KIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLE 429
            +          L + +   N L SLP  +G    L  L +  N +++L  +I N  N+ 
Sbjct: 310 NLSL--------LEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLTELPREIGNCKNVT 361

Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
           V+ L  N L+ LP  IG ++KL+ L+L +N+L++LP     LKEL  L L  NQ  +L
Sbjct: 362 VMSLRTNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 419



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 72/131 (54%)

Query: 103 ILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
           + NL +  + +  LP ++  L+ LEE     N+L SLP  IGY+ +L  L + EN LT L
Sbjct: 291 LTNLKVDDNQLVALPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLTEL 350

Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
           P  + N + + V+ LR NKL  LP  + ++  L++L L  NR+K +      L  L+ L 
Sbjct: 351 PREIGNCKNVTVMSLRTNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALW 410

Query: 223 MRDNKIRELPP 233
           + DN+ + L P
Sbjct: 411 LSDNQSKALIP 421


>gi|359323789|ref|XP_003640188.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and IQ
           domain-containing protein 4 [Canis lupus familiaris]
          Length = 561

 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 204/458 (44%), Gaps = 86/458 (18%)

Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH-------------- 248
           N+I+ +  DIQ+L NL +L +  N++ +L PELG L +L  LDL+H              
Sbjct: 59  NQIEEIPQDIQHLKNLRILYLNKNRLGKLCPELGRLGSLEGLDLSHNPLLSSSLPVLGGL 118

Query: 249 ----------------------------------NHLEELPKEIGNCTMLVTLDLQHNEL 274
                                             NHL  LPKEI N T L  + L HN+ 
Sbjct: 119 RRLRELRLYHTHLGEIPNVLCKLLHHLELLGLTGNHLRSLPKEIVNQTQLREIYLGHNQF 178

Query: 275 VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD--GLLSSLT 332
              P  L  L NL  + L  N+L ++PE +     L +F V    L+ LP+  GL + L 
Sbjct: 179 AVFPPELCVLCNLEIIDLDENQLTAIPEEIGNLARLQKFYVADNGLAGLPEALGLCAGLA 238

Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLL 392
            ++   LSRN+  + P  G  Q  ++  +    N ++++P  +  R  ++  + ++D  L
Sbjct: 239 VLD---LSRNRLRSLPR-GLAQLAALTEVGLSGNHLERLPR-LVCRWSSVHLLYLRDTGL 293

Query: 393 TSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
            +L       V L  L+L  N + +   ++  L +L+VL L +N +++LPS   +L KLK
Sbjct: 294 RALRRSFRRLVHLRLLDLSQNHLERGPAELCALRHLQVLALDDNRIRQLPSDFSSLSKLK 353

Query: 453 CLDLEENKLESLPNE--------------------------IGFLKELQRLILQSNQLVS 486
            L L  N+  S P E                          I  L+ L+ L +++N L  
Sbjct: 354 MLGLTGNQFPSFPEEILSLESLEKLYIGQDQGMKLTYIPEHISKLQSLKELYVENNHLEY 413

Query: 487 LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN--TCLNNIPFELALCSNL 544
           LP ++G + NL  L    N L+ +P  I   + L  L L DN  TCL   P  L    NL
Sbjct: 414 LPTSLGSMPNLEILDCRHNWLKKLPNSICQAQALKELLLEDNLITCL---PENLDNLVNL 470

Query: 545 QIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQGPYRTM 582
           ++++L + P+   P E+ + G   I  YLK++   + M
Sbjct: 471 KVLTLMDNPMEDPPKEVCIEGSQAIWTYLKIKRNKKIM 508



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 164/343 (47%), Gaps = 52/343 (15%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           +DL ++ +T +P  +  L  L++ Y+  N LA LP  +G    L  L L+ N L SLP  
Sbjct: 194 IDLDENQLTAIPEEIGNLARLQKFYVADNGLAGLPEALGLCAGLAVLDLSRNRLRSLPRG 253

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           LA L  L  + L  N L  LP +V + +S+ +LYLR   ++ +    + L +L +L +  
Sbjct: 254 LAQLAALTEVGLSGNHLERLPRLVCRWSSVHLLYLRDTGLRALRRSFRRLVHLRLLDLSQ 313

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N +   P EL  L++L  L L  N + +LP +  + + L  L L  N+  + P+ + +L 
Sbjct: 314 NHLERGPAELCALRHLQVLALDDNRIRQLPSDFSSLSKLKMLGLTGNQFPSFPEEILSLE 373

Query: 286 NLTRLRLSYN---RLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
           +L +L +  +   +L  +PE +SK   L E  VE   L  LP    +SL S+ N+ +   
Sbjct: 374 SLEKLYIGQDQGMKLTYIPEHISKLQSLKELYVENNHLEYLP----TSLGSMPNLEI--- 426

Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
                             ++  HN + K+P  I  +A+ L ++ ++DNL+T LP      
Sbjct: 427 ------------------LDCRHNWLKKLPNSI-CQAQALKELLLEDNLITCLP------ 461

Query: 403 VGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
                            E++ NLVNL+VL L +N ++  P  +
Sbjct: 462 -----------------ENLDNLVNLKVLTLMDNPMEDPPKEV 487



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 162/338 (47%), Gaps = 4/338 (1%)

Query: 133 GNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKL 192
           GN L SLP +I   T L  + L  N     P  L  L  L ++DL  N+L  +P  +  L
Sbjct: 152 GNHLRSLPKEIVNQTQLREIYLGHNQFAVFPPELCVLCNLEIIDLDENQLTAIPEEIGNL 211

Query: 193 TSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLE 252
             L+  Y+  N +  +   +   + L++L +  N++R LP  L +L  L  + L+ NHLE
Sbjct: 212 ARLQKFYVADNGLAGLPEALGLCAGLAVLDLSRNRLRSLPRGLAQLAALTEVGLSGNHLE 271

Query: 253 ELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNE 312
            LP+ +   + +  L L+   L  +      L++L  L LS N LE  P  L    HL  
Sbjct: 272 RLPRLVCRWSSVHLLYLRDTGLRALRRSFRRLVHLRLLDLSQNHLERGPAELCALRHLQV 331

Query: 313 FNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG--GPTQFTSVYSINFEHNQIDK 370
             ++   +  LP    SSL+ +  + L+ N+F ++P           +Y    +  ++  
Sbjct: 332 LALDDNRIRQLPSD-FSSLSKLKMLGLTGNQFPSFPEEILSLESLEKLYIGQDQGMKLTY 390

Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
           IP  I S+ ++L ++ +++N L  LP  LG+   L  L+   N + KL   I     L+ 
Sbjct: 391 IPEHI-SKLQSLKELYVENNHLEYLPTSLGSMPNLEILDCRHNWLKKLPNSICQAQALKE 449

Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI 468
           L+L +NL+  LP ++ NL  LK L L +N +E  P E+
Sbjct: 450 LLLEDNLITCLPENLDNLVNLKVLTLMDNPMEDPPKEV 487



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 148/341 (43%), Gaps = 48/341 (14%)

Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
           +D +   L  +P+EI +   L  +  + N++  IP  + +L NL  L L+ NRL  +   
Sbjct: 31  IDASSQSLTTVPREITDLEELEEVHXEKNQIEEIPQDIQHLKNLRILYLNKNRLGKL--- 87

Query: 304 LSKCVHLNEF-NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSIN 362
              C  L    ++EG  LS  P  LLSS   +        +   Y               
Sbjct: 88  ---CPELGRLGSLEGLDLSHNP--LLSSSLPVLGGLRRLRELRLY--------------- 127

Query: 363 FEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDI 422
             H  + +IP  +     +L  + +  N L SLP ++     L E+ LG NQ +    ++
Sbjct: 128 --HTHLGEIPNVLCKLLHHLELLGLTGNHLRSLPKEIVNQTQLREIYLGHNQFAVFPPEL 185

Query: 423 QNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSN 482
             L NLE++ L  N L  +P  IGNL +L+   + +N L  LP  +G    L  L L  N
Sbjct: 186 CVLCNLEIIDLDENQLTAIPEEIGNLARLQKFYVADNGLAGLPEALGLCAGLAVLDLSRN 245

Query: 483 QLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC------------ 530
           +L SLPR +  L  L+ + +  N+L+ +P  +    ++H LYL D               
Sbjct: 246 RLRSLPRGLAQLAALTEVGLSGNHLERLPRLVCRWSSVHLLYLRDTGLRALRRSFRRLVH 305

Query: 531 ----------LNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
                     L   P EL    +LQ+++LD+  + Q+PS+ 
Sbjct: 306 LRLLDLSQNHLERGPAELCALRHLQVLALDDNRIRQLPSDF 346


>gi|407040320|gb|EKE40068.1| leucine rich repeat / protein phosphatase 2C domain containing
           protein [Entamoeba nuttalli P19]
          Length = 861

 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 221/462 (47%), Gaps = 42/462 (9%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGY-------------------- 145
           +D+S + I  +P  +  +  L++     N + +LPSQI                      
Sbjct: 34  IDVSMNRIQEIPSQINSIPKLQKFRGNDNMIKTLPSQINIPTLKTLDLSSNHLKRFCKSI 93

Query: 146 -VTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR 204
            +T+LT + L+ N +T + D   +L  LR +DL  N++  +P  + KLTSL  + +  N 
Sbjct: 94  KLTSLTEINLSINQITKIDDDFGSLHALRFMDLSINRIQSVPKHLSKLTSLTFIDISNNL 153

Query: 205 IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTML 264
           + +    +  LS+L +L +++NKI  +P  + ++ NL  LD+++N ++++   +   T L
Sbjct: 154 LTSFPTPLLELSSLIVLKVKENKITTIPNGMSKMSNLQILDISNNKIDKITPSLCKLTKL 213

Query: 265 VTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
             LD+  N +  I D + NL  +  + +SY+ L+++P++    V L +  ++  ++   P
Sbjct: 214 SVLDVSANPINEINDQIQNLTTIKEIDISYSPLKTLPKSFMSLVGLRKLTLQHTSVKVPP 273

Query: 325 DGLLSSLTSINNITLSRNKF---TAYPSGG--------------PTQFTSVYSINFEHNQ 367
            G L   T ++ + LS  +F   T  P  G              P    S++ +N   N+
Sbjct: 274 AG-LQKFTKVSELNLSNGEFEKVTELPCSGDIDLSCNQIVELDLPDMEYSIHKLNLGQNR 332

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
           +   P       K +  + ++ N+L S+PL++ T   LT L+L +N  +     I    N
Sbjct: 333 LKDFPN--IKCLKEIKTLILQKNMLGSIPLEMFTGTSLTALDLSSNSFNAFPMSITTCTN 390

Query: 428 LEVLVLSNNLLKKLPS-SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVS 486
           L +L +SNN L  LP  S     KL+ L L  N ++ LP  +  L  L  L L+ N+L  
Sbjct: 391 LVLLNMSNNYLDSLPDISYSCFAKLEALLLGINIIDRLPETMSELTNLTTLHLEHNKLSK 450

Query: 487 LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           +P ++  +T L  L +  N +  +PE+   L NL  L L+ N
Sbjct: 451 IPESLFSMTKLVELFLNCNQIPELPEKFSLLTNLEILELSCN 492



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 195/406 (48%), Gaps = 10/406 (2%)

Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
           ++LS + IT +      L  L  + L  N++ S+P  +  +T+LT + ++ N LTS P  
Sbjct: 101 INLSINQITKIDDDFGSLHALRFMDLSINRIQSVPKHLSKLTSLTFIDISNNLLTSFPTP 160

Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRD 225
           L  L  L VL ++ NK+  +P  + K+++L+IL +  N+I  + P +  L+ LS+L +  
Sbjct: 161 LLELSSLIVLKVKENKITTIPNGMSKMSNLQILDISNNKIDKITPSLCKLTKLSVLDVSA 220

Query: 226 NKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLI 285
           N I E+  ++  L  +  +D++++ L+ LPK   +   L  L LQH  +   P  L    
Sbjct: 221 NPINEINDQIQNLTTIKEIDISYSPLKTLPKSFMSLVGLRKLTLQHTSVKVPPAGLQKFT 280

Query: 286 NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
            ++ L LS    E V E    C    + +        LPD       SI+ + L +N+  
Sbjct: 281 KVSELNLSNGEFEKVTEL--PCSGDIDLSCNQIVELDLPDMEY----SIHKLNLGQNRLK 334

Query: 346 AYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGL 405
            +P+        + ++  + N +  IP  +F+   +L+ +++  N   + P+ + T   L
Sbjct: 335 DFPN--IKCLKEIKTLILQKNMLGSIPLEMFT-GTSLTALDLSSNSFNAFPMSITTCTNL 391

Query: 406 TELNLGTNQISKLSE-DIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
             LN+  N +  L +        LE L+L  N++ +LP ++  L  L  L LE NKL  +
Sbjct: 392 VLLNMSNNYLDSLPDISYSCFAKLEALLLGINIIDRLPETMSELTNLTTLHLEHNKLSKI 451

Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSI 510
           P  +  + +L  L L  NQ+  LP     LTNL  L +  N ++ I
Sbjct: 452 PESLFSMTKLVELFLNCNQIPELPEKFSLLTNLEILELSCNYIKEI 497



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 169/389 (43%), Gaps = 93/389 (23%)

Query: 228 IRELPPE--LGELKNLVTLDLAHNHLEELPKEI----------GNCTMLVTL-------- 267
           + E P E    ELK +V +D++ N ++E+P +I          GN  M+ TL        
Sbjct: 16  LTEFPQEEVKKELKTVVLIDVSMNRIQEIPSQINSIPKLQKFRGNDNMIKTLPSQINIPT 75

Query: 268 --------------------------DLQHNELVNIPDMLGNLINLTRLRLSYNRLESVP 301
                                     +L  N++  I D  G+L  L  + LS NR++SVP
Sbjct: 76  LKTLDLSSNHLKRFCKSIKLTSLTEINLSINQITKIDDDFGSLHALRFMDLSINRIQSVP 135

Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
           + LSK   L   ++    L+S P  LL  L+S+  + +  NK T  P+G  ++ +++  +
Sbjct: 136 KHLSKLTSLTFIDISNNLLTSFPTPLL-ELSSLIVLKVKENKITTIPNGM-SKMSNLQIL 193

Query: 362 NFEHNQIDKIPYGIFSRAK----------------------NLSKVNMKDNLLTSLPLDL 399
           +  +N+IDKI   +    K                       + ++++  + L +LP   
Sbjct: 194 DISNNKIDKITPSLCKLTKLSVLDVSANPINEINDQIQNLTTIKEIDISYSPLKTLPKSF 253

Query: 400 GTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK---LPSSIGNLRKLKC--- 453
            + VGL +L L    +      +Q    +  L LSN   +K   LP S G++  L C   
Sbjct: 254 MSLVGLRKLTLQHTSVKVPPAGLQKFTKVSELNLSNGEFEKVTELPCS-GDI-DLSCNQI 311

Query: 454 --------------LDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
                         L+L +N+L+  PN I  LKE++ LILQ N L S+P  +   T+L+ 
Sbjct: 312 VELDLPDMEYSIHKLNLGQNRLKDFPN-IKCLKEIKTLILQKNMLGSIPLEMFTGTSLTA 370

Query: 500 LSVGENNLQSIPEEIGTLENLHTLYLNDN 528
           L +  N+  + P  I T  NL  L +++N
Sbjct: 371 LDLSSNSFNAFPMSITTCTNLVLLNMSNN 399



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 158/358 (44%), Gaps = 47/358 (13%)

Query: 98  CKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN 157
           CK   +  LD+S + I  +   ++ LT ++E+ +  + L +LP     +  L  L L   
Sbjct: 208 CKLTKLSVLDVSANPINEINDQIQNLTTIKEIDISYSPLKTLPKSFMSLVGLRKLTLQHT 267

Query: 158 SLTSLPDSLANLQQLRVLDLRHN---KLNELP-----------MVVYKL----TSLKILY 199
           S+   P  L    ++  L+L +    K+ ELP           +V   L     S+  L 
Sbjct: 268 SVKVPPAGLQKFTKVSELNLSNGEFEKVTELPCSGDIDLSCNQIVELDLPDMEYSIHKLN 327

Query: 200 LRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIG 259
           L  NR+K   P+I+ L  +  L ++ N +  +P E+    +L  LDL+ N     P  I 
Sbjct: 328 LGQNRLKDF-PNIKCLKEIKTLILQKNMLGSIPLEMFTGTSLTALDLSSNSFNAFPMSIT 386

Query: 260 NCTMLVTLDLQHNELVNIPDM-LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGC 318
            CT LV L++ +N L ++PD+       L  L L  N ++ +PET+S+  +L   ++E  
Sbjct: 387 TCTNLVLLNMSNNYLDSLPDISYSCFAKLEALLLGINIIDRLPETMSELTNLTTLHLEHN 446

Query: 319 ALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSR 378
            LS +P+ L S                          T +  +    NQI ++P   FS 
Sbjct: 447 KLSKIPESLFS-------------------------MTKLVELFLNCNQIPELPEK-FSL 480

Query: 379 AKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
             NL  + +  N +  +   +   VG+ +L+L TNQI K   D+  + +L  L LS N
Sbjct: 481 LTNLEILELSCNYIKEIT-PIVNLVGVKDLDLSTNQIEKCPSDLCGMTSLRSLDLSYN 537



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 81/141 (57%), Gaps = 4/141 (2%)

Query: 420 EDIQNLVNLEVLV-LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
           E+++  +   VL+ +S N ++++PS I ++ KL+     +N +++LP++I  +  L+ L 
Sbjct: 22  EEVKKELKTVVLIDVSMNRIQEIPSQINSIPKLQKFRGNDNMIKTLPSQIN-IPTLKTLD 80

Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFEL 538
           L SN L    ++I  LT+L+ +++  N +  I ++ G+L  L  + L+ N  + ++P  L
Sbjct: 81  LSSNHLKRFCKSI-KLTSLTEINLSINQITKIDDDFGSLHALRFMDLSINR-IQSVPKHL 138

Query: 539 ALCSNLQIMSLDNCPLSQIPS 559
           +  ++L  + + N  L+  P+
Sbjct: 139 SKLTSLTFIDISNNLLTSFPT 159


>gi|417765439|ref|ZP_12413401.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352376|gb|EJP04572.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 399

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 135/384 (35%), Positives = 201/384 (52%), Gaps = 16/384 (4%)

Query: 180 NKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELK 239
           NKL  +P  +++L +L IL L  NRI T+  +I+   NL  L++R N++  LP E+GELK
Sbjct: 4   NKLTIVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELK 63

Query: 240 NLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLES 299
            L  L+L +N ++ LP EIG    L   +L  N+L +IP  +GNL NL  L L  N+L++
Sbjct: 64  LLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKT 123

Query: 300 VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS--------RNKFTAYPSGG 351
           +P  + K   L   N+    L S     + +L    NI L         RN   A     
Sbjct: 124 LPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLNLAL---- 179

Query: 352 PTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLG 411
             Q   + S++ E+ +    P  I  R KNL  +++ D  L +LP ++     L  L+LG
Sbjct: 180 -EQPLKILSLSLEYQEFSLFPKEIL-RLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLG 237

Query: 412 TNQISKLSEDIQNLVNLEVL-VLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
            NQ+  L ++I  L NL  L + +NN  + LP  I  L+ L+ L L +N+ +  P EI  
Sbjct: 238 LNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWE 297

Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
           LK+L  L + +NQL +LP  IG L  L  L +  N L ++P EIG L NL  LYL  N  
Sbjct: 298 LKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNR- 356

Query: 531 LNNIPFELALCSNLQIMSLDNCPL 554
           +  +P E+A   NL+ ++L   P+
Sbjct: 357 IKTLPEEIARLQNLRKLTLYENPI 380



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 129/379 (34%), Positives = 208/379 (54%), Gaps = 11/379 (2%)

Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
           N LT +P  +  L+ L +L L +N+++ LP  + K  +L+ L LR NR+ T+  +I  L 
Sbjct: 4   NKLTIVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELK 63

Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
            L  L++ +N+I+ LP E+G L+NL   +L+ N L  +PKEIGN   L  L L++N+L  
Sbjct: 64  LLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKT 123

Query: 277 IPDMLGNLINLTRLRLSYNRL-----ESVPETLSKC-VHLNEFNVEGCALSSLPDGLLSS 330
           +P  +  L +L  L L  N L     + +   L  C + L +   EG    +L   L   
Sbjct: 124 LPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVE-EGRTYRNLNLALEQP 182

Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
           L  I +++L   +F+ +P     +  ++ S++     +  +P  I  R K+L ++++  N
Sbjct: 183 L-KILSLSLEYQEFSLFPKEI-LRLKNLRSLSLYDTSLVALPKEIV-RLKHLERLSLGLN 239

Query: 391 LLTSLPLDLGTWVGLTELNLGT-NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
            L SLP ++G    L  L++G  N+   L ++I  L NL  L+L+ N  K  P  I  L+
Sbjct: 240 QLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELK 299

Query: 450 KLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQS 509
           KL  L++  N+L++LP +IG LK LQ L L  N+L +LP  IG L NL+ L +  N +++
Sbjct: 300 KLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKT 359

Query: 510 IPEEIGTLENLHTLYLNDN 528
           +PEEI  L+NL  L L +N
Sbjct: 360 LPEEIARLQNLRKLTLYEN 378



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 185/384 (48%), Gaps = 42/384 (10%)

Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIG---------------- 144
           EN+  L L  + I+ LP  +EK  +L+EL L GN+L +LP +IG                
Sbjct: 17  ENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIK 76

Query: 145 -------YVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
                   + NL    L+ N L S+P  + NLQ LR+L L +N+L  LP  + KL  L++
Sbjct: 77  ILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 136

Query: 198 LYLRFN--------RIKTVHPDIQYLSNLSMLSMRDNKI-RELPPELGELKNLVTLDLAH 248
           L L  N        +I+ + P+     N+ +  + + +  R L   L +   +++L L +
Sbjct: 137 LNLLINPLLSEERKKIQALLPN----CNIDLRDVEEGRTYRNLNLALEQPLKILSLSLEY 192

Query: 249 NHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCV 308
                 PKEI     L +L L    LV +P  +  L +L RL L  N+L+S+P+ +    
Sbjct: 193 QEFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLR 252

Query: 309 HLNEFNVEG-CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQ 367
           +L   ++        LP   ++ L ++ ++ L++N+F  +P     +   +  +N   NQ
Sbjct: 253 NLRSLDIGANNEFEVLPKE-IARLQNLRSLLLNQNRFKIFPKEI-WELKKLVILNVNTNQ 310

Query: 368 IDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN 427
           +D +P  I  R K L  +++  N LT+LP ++G    LTEL L  N+I  L E+I  L N
Sbjct: 311 LDALPEKI-GRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQN 369

Query: 428 LEVLVLSNNLLKKLPSSIGNLRKL 451
           L  L L  N +   P  +  +RKL
Sbjct: 370 LRKLTLYENPIP--PQELDKIRKL 391



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 128/294 (43%), Gaps = 76/294 (25%)

Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
           NK T  P     +  ++  +  E+N+I  +P  I  ++KNL ++N++ N L +LP ++G 
Sbjct: 4   NKLTIVPKEI-WELENLTILRLENNRISTLPKEI-EKSKNLQELNLRGNRLVTLPGEIGE 61

Query: 402 W-------------------VGLTE----LNLGTNQISKLSEDIQNLVNLEVLVLSNNLL 438
                               +G  E     NL  N+++ + ++I NL NL +L L NN L
Sbjct: 62  LKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQL 121

Query: 439 KKLPSSIGNLRKLKCLDL--------EENKLESL-------------------------- 464
           K LP  +  L+ L+ L+L        E  K+++L                          
Sbjct: 122 KTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLNLALEQ 181

Query: 465 -----------------PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL 507
                            P EI  LK L+ L L    LV+LP+ I  L +L  LS+G N L
Sbjct: 182 PLKILSLSLEYQEFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQL 241

Query: 508 QSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
           +S+P+EIG L NL +L +  N     +P E+A   NL+ + L+       P EI
Sbjct: 242 KSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI 295



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 85/145 (58%)

Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
           M  N LT +P ++     LT L L  N+IS L ++I+   NL+ L L  N L  LP  IG
Sbjct: 1   MNGNKLTIVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIG 60

Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
            L+ L+ L+LE N+++ LPNEIG L+ L    L  N+L S+P+ IG+L NL  L +  N 
Sbjct: 61  ELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQ 120

Query: 507 LQSIPEEIGTLENLHTLYLNDNTCL 531
           L+++P ++  L++L  L L  N  L
Sbjct: 121 LKTLPRQMEKLQDLEVLNLLINPLL 145


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.314    0.133    0.371 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,643,697,706
Number of Sequences: 23463169
Number of extensions: 358920239
Number of successful extensions: 1618409
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 15233
Number of HSP's successfully gapped in prelim test: 28838
Number of HSP's that attempted gapping in prelim test: 844597
Number of HSP's gapped (non-prelim): 263548
length of query: 582
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 434
effective length of database: 8,886,646,355
effective search space: 3856804518070
effective search space used: 3856804518070
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)