RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10956
(582 letters)
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes
[TaxId: 1639]}
Length = 384
Score = 96.2 bits (238), Expect = 4e-22
Identities = 87/383 (22%), Positives = 154/383 (40%), Gaps = 39/383 (10%)
Query: 167 ANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDN 226
L + L + + L + L IK++ ++YL+NL+ ++ +N
Sbjct: 19 TALAEKMKTVLGKTNVTDTV-SQTDLDQVTTLQADRLGIKSI-DGVEYLNNLTQINFSNN 76
Query: 227 KIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLIN 286
++ ++ P L L LV D+ N+ + +T N + D L NL N
Sbjct: 77 QLTDITP-LKNLTKLV--DILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTN 133
Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
L RL LS N + + L++LT++ + +S NK +
Sbjct: 134 LNRLELSSNTISDISALSGLTSLQQLSFGNQV----TDLKPLANLTTLERLDISSNKVSD 189
Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
+ T++ S+ +NQI I NL ++++ N L + L + LT
Sbjct: 190 ISV--LAKLTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKDIG-TLASLTNLT 244
Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG-------------------- 446
+L+L NQIS L+ + L L L L N + + G
Sbjct: 245 DLDLANNQISNLAP-LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPI 303
Query: 447 -NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGEN 505
NL+ L L L N + + + L +LQRL +N++ + ++ +LTN+++LS G N
Sbjct: 304 SNLKNLTYLTLYFNNISDIS-PVSSLTKLQRLFFANNKVSDVS-SLANLTNINWLSAGHN 361
Query: 506 NLQSIPEEIGTLENLHTLYLNDN 528
+ + + L + L LND
Sbjct: 362 QISDLT-PLANLTRITQLGLNDQ 383
Score = 95.8 bits (237), Expect = 6e-22
Identities = 85/382 (22%), Positives = 151/382 (39%), Gaps = 20/382 (5%)
Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
+ L K+++T S L + L + S+ + Y+ NLT + + N LT
Sbjct: 22 AEKMKTVLGKTNVTD-TVSQTDLDQVTTLQADRLGIKSIDG-VEYLNNLTQINFSNNQLT 79
Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
+ L NL +L D+ N + + FN T ++ L+NL+
Sbjct: 80 DIT-PLKNLTKLV--DILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNR 136
Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
L + N I ++ G + + K + N T L LD+ N+ V+ +
Sbjct: 137 LELSSNTISDISALSGLTSLQQL---SFGNQVTDLKPLANLTTLERLDISSNK-VSDISV 192
Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLS 340
L L NL L + N++ + +L+E ++ G L + L+SLT++ ++ L+
Sbjct: 193 LAKLTNLESLIATNNQISDITPL-GILTNLDELSLNGNQLKDIGT--LASLTNLTDLDLA 249
Query: 341 RNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLG 400
N+ + T + + NQI I A ++N S +L
Sbjct: 250 NNQISNLAPLS--GLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLK 307
Query: 401 TWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENK 460
LT L L N IS +S + +L L+ L +NN + + S+ NL + L N+
Sbjct: 308 N---LTYLTLYFNNISDISP-VSSLTKLQRLFFANNKVSDVS-SLANLTNINWLSAGHNQ 362
Query: 461 LESLPNEIGFLKELQRLILQSN 482
+ L + L + +L L
Sbjct: 363 ISDLT-PLANLTRITQLGLNDQ 383
Score = 82.4 bits (202), Expect = 2e-17
Identities = 62/368 (16%), Positives = 136/368 (36%), Gaps = 26/368 (7%)
Query: 205 IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTML 264
I + D L+ + + + + +L + TL ++ + + L
Sbjct: 12 INQIFTD-TALAEKMKTVLGKTNVTDTVSQ-TDLDQVTTLQADRLGIKSI-DGVEYLNNL 68
Query: 265 VTLDLQHNELVNIPDMLGNLINLTRLRLSYNR--------------LESVPETLSKCVHL 310
++ +N+L +I L NL L + ++ N+ ++ +
Sbjct: 69 TQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDP 127
Query: 311 NEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDK 370
+ L + + +L + F + + +
Sbjct: 128 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKV 187
Query: 371 IPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEV 430
+ ++ NL + +N ++ + LG L EL+L NQ+ + + +L NL
Sbjct: 188 SDISVLAKLTNLESLIATNNQISDIT-PLGILTNLDELSLNGNQLKDIGT-LASLTNLTD 245
Query: 431 LVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRA 490
L L+NN + L + L KL L L N++ ++ G + + +
Sbjct: 246 LDLANNQISNLAP-LSGLTKLTELKLGANQISNISPLAGLTA--LTNLELNENQLEDISP 302
Query: 491 IGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLD 550
I +L NL+YL++ NN+ I + +L L L+ +N ++++ LA +N+ +S
Sbjct: 303 ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFANNK-VSDVS-SLANLTNINWLSAG 359
Query: 551 NCPLSQIP 558
+ +S +
Sbjct: 360 HNQISDLT 367
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Length = 305
Score = 93.2 bits (230), Expect = 1e-21
Identities = 58/300 (19%), Positives = 118/300 (39%), Gaps = 19/300 (6%)
Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSMLSMRDNKIR 229
LRV+ L ++P + +L L+ N+I + D + L NL L + +NKI
Sbjct: 11 HLRVVQCSDLGLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS 68
Query: 230 ELPP-ELGELKNLVTLDLAHNHLEELPKEIG-NCTMLVTLDLQHNELV-NIPDMLGNLIN 286
++ P L L L L+ N L+ELP+++ L + + ++ ++ + L +I
Sbjct: 69 KISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIV 128
Query: 287 LTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTA 346
+ L+ + ++++P GL SLT ++ L NK T
Sbjct: 129 VELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELH---LDGNKITK 185
Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLT 406
+ ++ + N I + G + +L ++++ +N L +P L +
Sbjct: 186 VDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQ 245
Query: 407 ELNLGTNQISKLSED-------IQNLVNLEVLVLSNNLLKKL---PSSIGNLRKLKCLDL 456
+ L N IS + + + + L +N ++ PS+ + + L
Sbjct: 246 VVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 305
Score = 86.2 bits (212), Expect = 3e-19
Identities = 62/306 (20%), Positives = 123/306 (40%), Gaps = 29/306 (9%)
Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPK-EIGNCTMLVTLDLQHNELVNI-PDML 281
D + ++P +L + LDL +N + E+ + N L TL L +N++ I P
Sbjct: 18 SDLGLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAF 75
Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL-- 339
L+ L RL LS N+L+ +PE + L E V ++ + + + L + + L
Sbjct: 76 APLVKLERLYLSKNQLKELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGT 133
Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTS-LPLD 398
+ K + +G + I I IP G+ +L+++++ N +T
Sbjct: 134 NPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPP---SLTELHLDGNKITKVDAAS 190
Query: 399 LGTWVGLTELNL-GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
L L +L L + + + + N +L L L+NN L K+P + + + ++ + L
Sbjct: 191 LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLH 250
Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTL 517
N + ++ + P + S +S+ N +Q + T
Sbjct: 251 NNNISAIGSND----------------FCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTF 294
Query: 518 ENLHTL 523
++
Sbjct: 295 RCVYVR 300
Score = 83.2 bits (204), Expect = 4e-18
Identities = 43/273 (15%), Positives = 93/273 (34%), Gaps = 14/273 (5%)
Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPE-TLSKCVHLNEFNVEGCALSSLP 324
+ L +P L + L L N++ + + +L+ + +S +
Sbjct: 14 VVQCSDLGLEKVPKDLPP--DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKIS 71
Query: 325 DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
G + L + + LS+N+ P P + E ++ K + ++ +
Sbjct: 72 PGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVEL 131
Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKK-LPS 443
L+ + + I+ + + + +L L L N + K +
Sbjct: 132 GTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGL--PPSLTELHLDGNKITKVDAA 189
Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGF-LKELQRLILQSNQLVSLPRAIGHLTNLSYLSV 502
S+ L L L L N + ++ N L+ L L +N+LV +P + + + +
Sbjct: 190 SLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYL 249
Query: 503 GENNLQSIPEE-------IGTLENLHTLYLNDN 528
NN+ +I + + L N
Sbjct: 250 HNNNISAIGSNDFCPPGYNTKKASYSGVSLFSN 282
Score = 80.5 bits (197), Expect = 3e-17
Identities = 56/259 (21%), Positives = 100/259 (38%), Gaps = 14/259 (5%)
Query: 102 NILNLDLSKSSITHLPPSV-EKLTHLEELYLYGNKLASL-PSQIGYVTNLTCLGLAENSL 159
+ LDL + IT + + L +L L L NK++ + P + L L L++N L
Sbjct: 32 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL 91
Query: 160 TSLPDSL-ANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD-IQYLSN 217
LP+ + LQ+LRV + K+ + + L + + Q +
Sbjct: 92 KELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK 151
Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEE-LPKEIGNCTMLVTLDLQHNELV- 275
LS + + D I +P L +L L L N + + + L L L N +
Sbjct: 152 LSYIRIADTNITTIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 209
Query: 276 NIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD------GLLS 329
L N +L L L+ N+L VP L+ ++ + +S++ G +
Sbjct: 210 VDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNT 269
Query: 330 SLTSINNITLSRNKFTAYP 348
S + ++L N +
Sbjct: 270 KKASYSGVSLFSNPVQYWE 288
Score = 78.9 bits (193), Expect = 1e-16
Identities = 62/310 (20%), Positives = 114/310 (36%), Gaps = 29/310 (9%)
Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASL-PSQIGYVTNLTCLGLAENSLTSL-P 163
+ S + +P + L L NK+ + + NL L L N ++ + P
Sbjct: 15 VQCSDLGLEKVPKDL--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISP 72
Query: 164 DSLANLQQLRVLDLRHNKLNELP-MVVYKLTSLKILYLRFNRIKT-VHPDIQYLSNLSML 221
+ A L +L L L N+L ELP + L L++ +++ V + + + +
Sbjct: 73 GAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELG 132
Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV-NIPDM 280
+ +K L + +A ++ +P+ G L L L N++
Sbjct: 133 TNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQ--GLPPSLTELHLDGNKITKVDAAS 190
Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCV-HLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
L L NL +L LS+N + +V HL E ++ L +P G L+ I + L
Sbjct: 191 LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGG-LADHKYIQVVYL 249
Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDL 399
N +A S D P G ++ + S V++ N + +
Sbjct: 250 HNNNISAIGSN------------------DFCPPGYNTKKASYSGVSLFSNPVQYWEIQP 291
Query: 400 GTWVGLTELN 409
T+ +
Sbjct: 292 STFRCVYVRA 301
Score = 77.8 bits (190), Expect = 2e-16
Identities = 53/257 (20%), Positives = 103/257 (40%), Gaps = 12/257 (4%)
Query: 309 HLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQI 368
HL L +P L ++ L NK T G +++++ +N+I
Sbjct: 11 HLRVVQCSDLGLEKVPKDLPPDTALLD---LQNNKITEIKDGDFKNLKNLHTLILINNKI 67
Query: 369 DKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
KI G F+ L ++ + N L LP + + EL + N+I+K+ + + N +N
Sbjct: 68 SKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTL--QELRVHENEITKVRKSVFNGLNQ 125
Query: 429 EVLVL----SNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL 484
++V + ++KL + + + + ++P G L L L N++
Sbjct: 126 MIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQ--GLPPSLTELHLDGNKI 183
Query: 485 VS-LPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
++ L NL+ L + N++ ++ +N L +P LA
Sbjct: 184 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKY 243
Query: 544 LQIMSLDNCPLSQIPSE 560
+Q++ L N +S I S
Sbjct: 244 IQVVYLHNNNISAIGSN 260
Score = 59.3 bits (142), Expect = 3e-10
Identities = 29/138 (21%), Positives = 49/138 (35%), Gaps = 3/138 (2%)
Query: 427 NLEVLVLSNNLLKKL-PSSIGNLRKLKCLDLEENKLESL-PNEIGFLKELQRLILQSNQL 484
+ +L L NN + ++ NL+ L L L NK+ + P L +L+RL L NQL
Sbjct: 32 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL 91
Query: 485 VSLPRAIG-HLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSN 543
LP + L L ++ + L N
Sbjct: 92 KELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK 151
Query: 544 LQIMSLDNCPLSQIPSEI 561
L + + + ++ IP +
Sbjct: 152 LSYIRIADTNITTIPQGL 169
Score = 51.6 bits (122), Expect = 9e-08
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 4/149 (2%)
Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL-PNEIGFLKELQRLILQSNQLV 485
+L V+ S+ L+K+P + LDL+ NK+ + + LK L LIL +N++
Sbjct: 11 HLRVVQCSDLGLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS 68
Query: 486 SL-PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
+ P A L L L + +N L+ +PE++ ++ N+ T + F +
Sbjct: 69 KISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIV 128
Query: 545 QIMSLDNCPLSQIPSEIVVGGPSLIIRYL 573
+ + S I + G L +
Sbjct: 129 VELGTNPLKSSGIENGAFQGMKKLSYIRI 157
Score = 45.8 bits (107), Expect = 8e-06
Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPE-EIGTLENLHTLYLNDNTCLNNIPFEL 538
L +P+ + + + L + N + I + + L+NLHTL L +N P
Sbjct: 18 SDLGLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAF 75
Query: 539 ALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYLKMQG 577
A L+ + L L ++P ++ L + ++
Sbjct: 76 APLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITK 114
Score = 36.9 bits (84), Expect = 0.005
Identities = 26/134 (19%), Positives = 60/134 (44%), Gaps = 12/134 (8%)
Query: 102 NILNLDLSKSSITHLPP-SVEKLTHLEELYLYGNKLASLP-SQIGYVTNLTCLGLAENSL 159
++ L L + IT + S++ L +L +L L N ++++ + +L L L N L
Sbjct: 172 SLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL 231
Query: 160 TSLPDSLANLQQLRVLDLRHNKLNELPMVVY-------KLTSLKILYLRFNRIKT--VHP 210
+P LA+ + ++V+ L +N ++ + + K S + L N ++ + P
Sbjct: 232 VKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQP 291
Query: 211 D-IQYLSNLSMLSM 223
+ + + + +
Sbjct: 292 STFRCVYVRAAVQL 305
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia
pestis [TaxId: 632]}
Length = 353
Score = 82.9 bits (203), Expect = 9e-18
Identities = 59/329 (17%), Positives = 108/329 (32%), Gaps = 16/329 (4%)
Query: 147 TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK 206
L L L+SLP+ +L+ L N L ELP + SLK L + N +
Sbjct: 38 RQAHELELNNLGLSSLPELPPHLE---SLVASCNSLTELPEL---PQSLKSLLVDNNNL- 90
Query: 207 TVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVT 266
+ L L N E PEL L +D+ +N L++LP + +
Sbjct: 91 ---KALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAA 147
Query: 267 LDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDG 326
+ Q EL + ++ + S N +
Sbjct: 148 GNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLT 207
Query: 327 LLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVN 386
+ + ++ + T + + +D ++ +
Sbjct: 208 TIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLY 267
Query: 387 MKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
+ + L ELN+ N++ +L L E L+ S N L ++P
Sbjct: 268 YLNASSNEIRSLCDLPPSLEELNVSNNKLIELPALPPRL---ERLIASFNHLAEVPELPQ 324
Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQ 475
NL++ L +E N L P+ +++L+
Sbjct: 325 NLKQ---LHVEYNPLREFPDIPESVEDLR 350
Score = 79.1 bits (193), Expect = 2e-16
Identities = 54/322 (16%), Positives = 101/322 (31%), Gaps = 25/322 (7%)
Query: 216 SNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELV 275
L + + + LP +L +L + N L ELP+ + L+ + L
Sbjct: 38 RQAHELELNNLGLSSLPELPP---HLESLVASCNSLTELPELPQSLKSLLVDNNNLKALS 94
Query: 276 NIPDML-----GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
++P +L N L + + + + + + + L
Sbjct: 95 DLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEE 154
Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
L + N+ + S + + L+ + +N
Sbjct: 155 LPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNN 214
Query: 391 LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ-----------NLVNLEVLVLSNNLLK 439
LL +LP + L + + +L + + L N
Sbjct: 215 LLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSN 274
Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
++ S L+ L++ NKL LP L+RLI N L +P NL
Sbjct: 275 EIRSLCDLPPSLEELNVSNNKLIELPALPP---RLERLIASFNHLAEVP---ELPQNLKQ 328
Query: 500 LSVGENNLQSIPEEIGTLENLH 521
L V N L+ P+ ++E+L
Sbjct: 329 LHVEYNPLREFPDIPESVEDLR 350
Score = 75.6 bits (184), Expect = 2e-15
Identities = 56/329 (17%), Positives = 105/329 (31%), Gaps = 16/329 (4%)
Query: 124 THLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLN 183
EL L L+SLP +L L + NSLT LP+ +L+ L V + L
Sbjct: 38 RQAHELELNNLGLSSLPELPP---HLESLVASCNSLTELPELPQSLKSLLVDNNNLKAL- 93
Query: 184 ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVT 243
L L N P++Q S L ++ + +N +++LP L+ +
Sbjct: 94 ------SDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAA 147
Query: 244 LDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPET 303
+ L EL + + + + L T
Sbjct: 148 GNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLT 207
Query: 304 LSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINF 363
+ + S + + + F + + + +
Sbjct: 208 TIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLY 267
Query: 364 EHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQ 423
N + +L ++N+ +N L LP L L N ++++ E Q
Sbjct: 268 YLNASSNEIRSLCDLPPSLEELNVSNNKLIELPALPPR---LERLIASFNHLAEVPELPQ 324
Query: 424 NLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
NL+ L + N L++ P ++ L+
Sbjct: 325 ---NLKQLHVEYNPLREFPDIPESVEDLR 350
Score = 73.3 bits (178), Expect = 1e-14
Identities = 53/327 (16%), Positives = 105/327 (32%), Gaps = 16/327 (4%)
Query: 171 QLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRE 230
Q L+L + L+ LP + L+ L N + + +L L + +N ++
Sbjct: 39 QAHELELNNLGLSSLPEL---PPHLESLVASCNSLTELPE---LPQSLKSLLVDNNNLKA 92
Query: 231 LPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRL 290
L L L+ N+ E E+ N + L +D+ +N L +PD+ +L +
Sbjct: 93 LSD----LPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAG 148
Query: 291 RLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSG 350
L + + N + L + + +
Sbjct: 149 NNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTT 208
Query: 351 GPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNL 410
+ ++ ++ + L S + G L
Sbjct: 209 IYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYY 268
Query: 411 GTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGF 470
+++ +LE L +SNN L +LP+ L + L N L +P
Sbjct: 269 LNASSNEIRSLCDLPPSLEELNVSNNKLIELPALPPRLER---LIASFNHLAEVPEL--- 322
Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNL 497
+ L++L ++ N L P + +L
Sbjct: 323 PQNLKQLHVEYNPLREFPDIPESVEDL 349
Score = 64.1 bits (154), Expect = 1e-11
Identities = 50/323 (15%), Positives = 102/323 (31%), Gaps = 17/323 (5%)
Query: 239 KNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLE 298
+ L+L + L LP+ + L +L N L +P++ +L L + N L+
Sbjct: 38 RQAHELELNNLGLSSLPELPPH---LESLVASCNSLTELPELPQ---SLKSLLVDNNNLK 91
Query: 299 SVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSV 358
++ + +L N + L L + + ++N +L + +
Sbjct: 92 ALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQ 151
Query: 359 YSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
E + + ++ +L + + + L EL +
Sbjct: 152 LEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGN-NILEELPELQNLPFLTTIY 210
Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLI 478
+++ ++ L + + L + L L
Sbjct: 211 ADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLN 270
Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFEL 538
SN++ SL L L+V N L +P L L + N L +P
Sbjct: 271 ASSNEIRSLCDLPPSLE---ELNVSNNKLIELPALPP---RLERLIASFN-HLAEVP--- 320
Query: 539 ALCSNLQIMSLDNCPLSQIPSEI 561
L NL+ + ++ PL + P
Sbjct: 321 ELPQNLKQLHVEYNPLREFPDIP 343
Score = 62.5 bits (150), Expect = 4e-11
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 123 LTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
LEEL + NKL LP+ L L + N L +P+ NL+QL + +N L
Sbjct: 283 PPSLEELNVSNNKLIELPALPP---RLERLIASFNHLAEVPELPQNLKQL---HVEYNPL 336
Query: 183 NELPMVVYKLTSLKI 197
E P + + L++
Sbjct: 337 REFPDIPESVEDLRM 351
Score = 56.8 bits (135), Expect = 3e-09
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
++ L++S + + LP LE L N LA +P NL L + N L
Sbjct: 285 SLEELNVSNNKLIELPAL---PPRLERLIASFNHLAEVPELPQ---NLKQLHVEYNPLRE 338
Query: 162 LPDSLANLQQLRV 174
PD +++ LR+
Sbjct: 339 FPDIPESVEDLRM 351
Score = 55.2 bits (131), Expect = 7e-09
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Query: 260 NCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA 319
L L++ +N+L+ +P + L RL S+N L VPE +L + +VE
Sbjct: 282 LPPSLEELNVSNNKLIELPALPPRL---ERLIASFNHLAEVPELPQ---NLKQLHVEYNP 335
Query: 320 LSSLPDGLLSSLTS--INN 336
L PD + S+ +N+
Sbjct: 336 LREFPD-IPESVEDLRMNS 353
Score = 54.8 bits (130), Expect = 1e-08
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Query: 142 QIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLR 201
+L L ++ N L LP L+ L N L E+P + +LK L++
Sbjct: 279 LCDLPPSLEELNVSNNKLIELPALPPRLE---RLIASFNHLAEVPEL---PQNLKQLHVE 332
Query: 202 FNRIKTVHPDIQYLSNLSM 220
+N ++ + + +L M
Sbjct: 333 YNPLREFPDIPESVEDLRM 351
Score = 37.9 bits (86), Expect = 0.003
Identities = 47/309 (15%), Positives = 97/309 (31%), Gaps = 16/309 (5%)
Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTS 161
++ +L S +S+T LP + L L L+ LP + Y+ L +
Sbjct: 59 HLESLVASCNSLTELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQN 118
Query: 162 LPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSML 221
+ ++ +D K + + L P + + +
Sbjct: 119 S-----SFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNS 173
Query: 222 SMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDML 281
+ + + N++ +L L + +L TL L +
Sbjct: 174 LKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRD 233
Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
L +L L S L+ S L A S+ L S+ + +S
Sbjct: 234 NYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSN 293
Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
NK P+ + + N + ++P +NL +++++ N L P +
Sbjct: 294 NKLIELPAL----PPRLERLIASFNHLAEVPELP----QNLKQLHVEYNPLREFPDIPES 345
Query: 402 WVGLTELNL 410
+ +L +
Sbjct: 346 ---VEDLRM 351
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of
glycoprotein Ib alpha {Human (Homo sapiens) [TaxId:
9606]}
Length = 266
Score = 62.4 bits (150), Expect = 2e-11
Identities = 53/260 (20%), Positives = 87/260 (33%), Gaps = 32/260 (12%)
Query: 119 SVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLP-DSLANLQQLRVLDL 177
V K+ E+ L +LP + + T L L+EN L + +L +L L+L
Sbjct: 5 EVSKVASHLEVNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNL 62
Query: 178 RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHP------------------------DIQ 213
+L + V L L L L N+++++ ++
Sbjct: 63 DRAELTK-LQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALR 121
Query: 214 YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH--LEELPKEIGNCTMLVTLDLQH 271
L L L ++ N+++ LPP L + N+ E + L TL LQ
Sbjct: 122 GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQE 181
Query: 272 NELVNIPDMLGNLINLTRLRLSYNRLESVPE--TLSKCVHLNEFNVEGCALSSLPDGLLS 329
N L IP L L N E + + N NV + S
Sbjct: 182 NSLYTIPKGFFGSHLLPFAFLHGNPWLCNCEILYFRRWLQDNAENVYVWKQGVDVKAMTS 241
Query: 330 SLTSINNITLSRNKFTAYPS 349
++ S+ + YP
Sbjct: 242 NVASVQCDNSDKFPVYKYPG 261
Score = 60.9 bits (146), Expect = 7e-11
Identities = 36/205 (17%), Positives = 65/205 (31%), Gaps = 6/205 (2%)
Query: 282 GNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSR 341
+ + + L ++P L K ++ L + L T + + L R
Sbjct: 7 SKVASHLEVNCDKRNLTALPPDLPK--DTTILHLSENLLYTFSLATLMPYTRLTQLNLDR 64
Query: 342 NKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT 401
+ T + +++ HNQ+ +P + + L + L
Sbjct: 65 AELTKLQV--DGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRG 122
Query: 402 WVGLTELNLGTNQISKLSEDIQNLVNLEVLVLS--NNLLKKLPSSIGNLRKLKCLDLEEN 459
L EL L N++ L + + NNL + + L L L L+EN
Sbjct: 123 LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN 182
Query: 460 KLESLPNEIGFLKELQRLILQSNQL 484
L ++P L L N
Sbjct: 183 SLYTIPKGFFGSHLLPFAFLHGNPW 207
Score = 55.9 bits (133), Expect = 3e-09
Identities = 43/234 (18%), Positives = 79/234 (33%), Gaps = 11/234 (4%)
Query: 102 NILNLDLSKSSITHLPPSV-EKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
+ L LS++ + + T L +L L +L L T +
Sbjct: 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQS 91
Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
+ + + + L L+ LYL+ N +KT+ P + +
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 221 LSMRD-NKIRELPPE-LGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHN------ 272
N + ELP L L+NL TL L N L +PK +L L N
Sbjct: 152 KLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211
Query: 273 ELVNIPDMLGNLINLTRLRLSYNRLESVPETLS--KCVHLNEFNVEGCALSSLP 324
E++ L + + ++++ ++ +C + ++F V P
Sbjct: 212 EILYFRRWLQDNAENVYVWKQGVDVKAMTSNVASVQCDNSDKFPVYKYPGKGCP 265
Score = 50.9 bits (120), Expect = 1e-07
Identities = 40/202 (19%), Positives = 70/202 (34%), Gaps = 5/202 (2%)
Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
S + S + + TA P P ++ N + L+++N+
Sbjct: 7 SKVASHLEVNCDKRNLTALPPDLPK---DTTILHLSENLLYTFSLATLMPYTRLTQLNLD 63
Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
LT L +D V T S + V N L ++ L
Sbjct: 64 RAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGL 123
Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQS--NQLVSLPRAIGHLTNLSYLSVGENN 506
+L+ L L+ N+L++LP + + + N + L NL L + EN+
Sbjct: 124 GELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENS 183
Query: 507 LQSIPEEIGTLENLHTLYLNDN 528
L +IP+ L +L+ N
Sbjct: 184 LYTIPKGFFGSHLLPFAFLHGN 205
Score = 50.9 bits (120), Expect = 1e-07
Identities = 47/205 (22%), Positives = 67/205 (32%), Gaps = 29/205 (14%)
Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLS-EDIQNLVNLEVLVLS 434
S+ + +VN LT+LP DL T L+L N + S + L L L
Sbjct: 6 VSKVASHLEVNCDKRNLTALPPDLPK--DTTILHLSENLLYTFSLATLMPYTRLTQLNLD 63
Query: 435 NNL---------LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRL-------- 477
L L + + +L+ L L L +L L L
Sbjct: 64 RAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGL 123
Query: 478 ------ILQSNQLVSLPRAIGHLTNLSYLSVGENN--LQSIPEEIGTLENLHTLYLNDNT 529
L+ N+L +LP + T NN + + LENL TL L +N+
Sbjct: 124 GELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENS 183
Query: 530 CLNNIPFELALCSNLQIMSLDNCPL 554
IP L L P
Sbjct: 184 L-YTIPKGFFGSHLLPFAFLHGNPW 207
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase
alpha-subunit, C-terminal domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 59.3 bits (143), Expect = 2e-11
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Query: 173 RVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELP 232
RVL L H L L + +L + L L NR++ + P + L L +L DN + +
Sbjct: 1 RVLHLAHKDLTVLC-HLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD 59
Query: 233 PELGELKNLVTLDLAHNHLEELP--KEIGNCTMLVTLDLQHNELVNIPDMLGNLINL 287
L L L +N L++ + + +C LV L+LQ N L + L +
Sbjct: 60 GVANL-PRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
Score = 54.3 bits (130), Expect = 1e-09
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 408 LNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
L+L ++ L ++ L+ + L LS+N L+ LP ++ LR L+ L +N LE++
Sbjct: 3 LHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDGV 61
Query: 468 IGFLKELQRLILQSNQLVSLP--RAIGHLTNLSYLSVGENNLQSIPEEIGTLENL 520
LQ L+L +N+L + + L L++ N+L L +
Sbjct: 62 ANL-PRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
Score = 54.0 bits (129), Expect = 2e-09
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 4/117 (3%)
Query: 196 KILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP 255
++L+L + + ++ L ++ L + N++R LPP L L+ L L + N LE +
Sbjct: 1 RVLHLAHKDLTVL-CHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD 59
Query: 256 KEIGNCTMLVTLDLQHNELVNIPDM--LGNLINLTRLRLSYNRLESVPETLSKCVHL 310
+ N L L L +N L + L + L L L N L + +
Sbjct: 60 -GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
Score = 51.6 bits (123), Expect = 1e-08
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 152 LGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD 211
L LA LT L L L + LDL HN+L LP + L L++L N ++ V
Sbjct: 3 LHLAHKDLTVLC-HLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENV-DG 60
Query: 212 IQYLSNLSMLSMRDNKIRELPP--ELGELKNLVTLDLAHNHLEELPKEIGN 260
+ L L L + +N++++ L LV L+L N L +
Sbjct: 61 VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQER 111
Score = 47.8 bits (113), Expect = 2e-07
Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 10/123 (8%)
Query: 220 MLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPD 279
+L + + L L +L + LDL+HN L LP + L L N L N+
Sbjct: 2 VLHLAHKDLTVLC-HLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDG 60
Query: 280 MLGNLINLTRLRLSYNRLESVP--ETLSKCVHLNEFNVEGCALSSLPD------GLLSSL 331
+ L L L NRL+ + L C L N++G +L +L S+
Sbjct: 61 VANL-PRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 119
Query: 332 TSI 334
+SI
Sbjct: 120 SSI 122
Score = 47.0 bits (111), Expect = 4e-07
Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 25/114 (21%)
Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL---------------- 149
L L+ +T L +E+L + L L N+L +LP + + L
Sbjct: 3 LHLAHKDLTVLC-HLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDGV 61
Query: 150 ------TCLGLAENSLTSLPD--SLANLQQLRVLDLRHNKLNELPMVVYKLTSL 195
L L N L L + +L +L+L+ N L + + +L +
Sbjct: 62 ANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
Score = 46.6 bits (110), Expect = 5e-07
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 129 LYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMV 188
L+L L L + + +T L L+ N L +LP +LA L+ L VL N L + V
Sbjct: 3 LHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDGV 61
Query: 189 VYKLTSLKILYLRFNRIKTVHP--DIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
L+ L L NR++ + L +L+++ N + + L ++
Sbjct: 62 ANL-PRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEML 116
Score = 45.5 bits (107), Expect = 1e-06
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 3/111 (2%)
Query: 452 KCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP 511
+ L L L L + + L + L L N+L +LP A+ L L L +N L+++
Sbjct: 1 RVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD 59
Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFE-LALCSNLQIMSLDNCPLSQIPSEI 561
L L L +N + + L C L +++L L Q
Sbjct: 60 GVANL-PRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 109
Score = 45.1 bits (106), Expect = 2e-06
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 4/117 (3%)
Query: 430 VLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPR 489
VL L++ L L + L + LDL N+L +LP + L+ L+ L N L ++
Sbjct: 2 VLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD- 59
Query: 490 AIGHLTNLSYLSVGENNLQSIP--EEIGTLENLHTLYLNDNTCLNNIPFELALCSNL 544
+ +L L L + N LQ + + + L L L N+ + L L
Sbjct: 60 GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEML 116
Score = 42.8 bits (100), Expect = 1e-05
Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 5/116 (4%)
Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
++ H + + + + ++ +++ N L +LP L L L N + +
Sbjct: 3 LHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDG 60
Query: 421 DIQNLVNLEVLVLSNNLLKKLP--SSIGNLRKLKCLDLEENKLESLPNEIGFLKEL 474
L+ L+L NN L++ + + +L L+L+ N L L E+
Sbjct: 61 VANL-PRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
Score = 33.5 bits (76), Expect = 0.017
Identities = 20/117 (17%), Positives = 38/117 (32%), Gaps = 7/117 (5%)
Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
++ L+ L L L + ++ LS N+ A P ++ +
Sbjct: 4 HLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDGV 61
Query: 374 GIFSRAKNLSKVNMKDNLLTSLPL--DLGTWVGLTELNLGTNQISKLSEDIQNLVNL 428
R + L + +N L L + L LNL N + + + L +
Sbjct: 62 ANLPRLQEL---LLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
Score = 29.7 bits (66), Expect = 0.34
Identities = 8/54 (14%), Positives = 14/54 (25%), Gaps = 2/54 (3%)
Query: 98 CKEENILNLDLSKSSITHLPP--SVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
+ L L + + + L L L GN L + +
Sbjct: 62 ANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 58.7 bits (140), Expect = 5e-10
Identities = 53/290 (18%), Positives = 98/290 (33%), Gaps = 33/290 (11%)
Query: 156 ENSLTSLPDSLANLQQLRVLDLRHNKLNELP-MVVYKLTSLKILYLRFNRIKTVHPDIQY 214
+ L ++P + + + L N+++ +P +L IL+L N + +
Sbjct: 20 QQGLQAVPVGIPAA--SQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFT 77
Query: 215 LSNLSMLSMRDNKI---RELPPELGELKNLVTLDLAHNHLEELPKEIGNCTM-LVTLDLQ 270
L + P L L TL L L+EL + L L LQ
Sbjct: 78 GLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ 137
Query: 271 HNELVNI-PDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLS 329
N L + D +L NLT L L NR+ S+P+
Sbjct: 138 DNALQALPDDTFRDLGNLTHLFLHGNRIS-----------------------SVPERAFR 174
Query: 330 SLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKD 389
L S++ + L +N+ + ++ N + +P + + L + + D
Sbjct: 175 GLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLND 234
Query: 390 NLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
N W L + ++++ Q L ++ L+ N L+
Sbjct: 235 NPWVCDCRARPLWAWLQKFRGSSSEVP--CSLPQRLAGRDLKRLAANDLQ 282
Score = 57.1 bits (136), Expect = 1e-09
Identities = 55/280 (19%), Positives = 95/280 (33%), Gaps = 60/280 (21%)
Query: 97 RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQ-IGYVTNLTCLGLA 155
C E + + + +P + + ++L+GN+++ +P+ NLT L L
Sbjct: 7 VCYNEPKVTTSCPQQGLQAVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLH 64
Query: 156 ENSLTS--------------------------LPDSLANLQQLRVLDLRHNKLNELPM-V 188
N L P + L +L L L L EL +
Sbjct: 65 SNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGL 124
Query: 189 VYKLTSLKILYLRFNRIKTVHPD-IQYLSNLSMLSMRDNKIRELPPE-LGELKNLVTLDL 246
L +L+ LYL+ N ++ + D + L NL+ L + N+I +P L +L L L
Sbjct: 125 FRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLL 184
Query: 247 AHNHLEELPKEI-------------------------GNCTMLVTLDLQHNELVNIPDML 281
N + + L L L N V
Sbjct: 185 HQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR 244
Query: 282 GNLINLTRLRLSYNRLE-SVPETLS--KCVHLNEFNVEGC 318
L + R S + + S+P+ L+ L +++GC
Sbjct: 245 PLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQGC 284
Score = 57.1 bits (136), Expect = 1e-09
Identities = 52/268 (19%), Positives = 92/268 (34%), Gaps = 12/268 (4%)
Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKE-IGNCTMLVTLDLQHNELVNIPDMLG 282
++ +P + + L N + +P C L L L N L I
Sbjct: 19 PQQGLQAVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAF 76
Query: 283 NLINLTRLRLSYNRLES---VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITL 339
+ L + + P T L+ +++ C L L GL L ++ + L
Sbjct: 77 TGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYL 136
Query: 340 SRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSL-PLD 398
N A P ++ + N+I +P F +L ++ + N + + P
Sbjct: 137 QDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHA 196
Query: 399 LGTWVGLTELNLGTNQISKL-SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLE 457
L L L N +S L +E + L L+ L L++N + L+
Sbjct: 197 FRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGS 256
Query: 458 ENKLE-SLPNEIGFLKELQRLILQSNQL 484
+++ SLP L L +N L
Sbjct: 257 SSEVPCSLPQR---LAGRDLKRLAANDL 281
Score = 53.7 bits (127), Expect = 2e-08
Identities = 52/273 (19%), Positives = 91/273 (33%), Gaps = 10/273 (3%)
Query: 288 TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSIN-NITLSRNKFTA 346
L++VP + + G +S +P + ++ S
Sbjct: 14 VTTSCPQQGLQAVPVGIPA--ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARI 71
Query: 347 YPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVG-L 405
+ ++ Q+ + F L +++ L L L + L
Sbjct: 72 DAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAAL 131
Query: 406 TELNLGTNQISKLSED-IQNLVNLEVLVLSNNLLKKLP-SSIGNLRKLKCLDLEENKLES 463
L L N + L +D ++L NL L L N + +P + L L L L +N++
Sbjct: 132 QYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191
Query: 464 L-PNEIGFLKELQRLILQSNQLVSL-PRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLH 521
+ P+ L L L L +N L +L A+ L L YL + +N L
Sbjct: 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQ 251
Query: 522 TLYLNDNTCLNNIPFELA--LCSNLQIMSLDNC 552
+ + ++P LA L L C
Sbjct: 252 KFRGSSSEVPCSLPQRLAGRDLKRLAANDLQGC 284
Score = 44.0 bits (102), Expect = 2e-05
Identities = 34/183 (18%), Positives = 67/183 (36%), Gaps = 8/183 (4%)
Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL-SEDIQNLVNLEVLVLSNNLLKKLPS 443
+ L ++P+ + + L N+IS + + + NL +L L +N+L ++ +
Sbjct: 16 TSCPQQGLQAVPVGIPA--ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDA 73
Query: 444 SIGNLRKLKCLDLEENKLES---LPNEIGFLKELQRLILQSNQLVSLPRAIGHL-TNLSY 499
+ L + + P L L L L L L + L Y
Sbjct: 74 AAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQY 133
Query: 500 LSVGENNLQSI-PEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIP 558
L + +N LQ++ + L NL L+L+ N + +L + L ++ +
Sbjct: 134 LYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVH 193
Query: 559 SEI 561
Sbjct: 194 PHA 196
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes
[TaxId: 1639]}
Length = 227
Score = 57.0 bits (136), Expect = 9e-10
Identities = 39/231 (16%), Positives = 79/231 (34%), Gaps = 13/231 (5%)
Query: 205 IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTML 264
I + PD L+N ++ + + + +L + TL + + + L
Sbjct: 9 INVIFPD-PALANAIKIAAGKSNVTDTVT-QADLDGITTLSAFGTGVTTIE-GVQYLNNL 65
Query: 265 VTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
+ L+L+ N++ ++ + NL +T L LS N L++V P
Sbjct: 66 IGLELKDNQITDLAPL-KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTP 124
Query: 325 DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
+ + + + L+
Sbjct: 125 -------LAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTT 177
Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
+ DN ++ + L + L E++L NQIS +S + N NL ++ L+N
Sbjct: 178 LKADDNKISDIS-PLASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTN 226
Score = 52.7 bits (125), Expect = 2e-08
Identities = 38/216 (17%), Positives = 73/216 (33%), Gaps = 9/216 (4%)
Query: 101 ENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT 160
N + + KS++T + L + L +G + ++ + Y+ NL L L +N +T
Sbjct: 19 ANAIKIAAGKSNVTD-TVTQADLDGITTLSAFGTGVTTIEG-VQYLNNLIGLELKDNQIT 76
Query: 161 SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSM 220
L + + + N + + L T + L L +
Sbjct: 77 DLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYL 136
Query: 221 LSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDM 280
+ I L + N + N + L TL N++ +I
Sbjct: 137 DLNQITNISPLAG-----LTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP- 190
Query: 281 LGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVE 316
L +L NL + L N++ V L+ +L +
Sbjct: 191 LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLT 225
Score = 46.6 bits (109), Expect = 2e-06
Identities = 25/217 (11%), Positives = 64/217 (29%), Gaps = 22/217 (10%)
Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
L N ++ + + T + + + G ++++ + L ++ + L N
Sbjct: 17 ALANAIKIAAGKSNVTDTV-TQADLDGITTLSAFGTGVTTIEG--VQYLNNLIGLELKDN 73
Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
+ T + ++ + G+ S ++ L
Sbjct: 74 QITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 133
Query: 403 VGLTELNLGTNQI----------------SKLSEDIQNLVNLEVLVLSNNLLKKLPSSIG 446
+ L + + NL L L +N + + +
Sbjct: 134 LYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP-LA 192
Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
+L L + L+ N++ + + L + L +NQ
Sbjct: 193 SLPNLIEVHLKNNQISDVS-PLANTSNLFIVTL-TNQ 227
Score = 39.6 bits (91), Expect = 5e-04
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 125 HLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRH 179
L L NK++ + + + NL + L N ++ + LAN L ++ L +
Sbjct: 174 KLTTLKADDNKISDISP-LASLPNLIEVHLKNNQISDVS-PLANTSNLFIVTLTN 226
Score = 34.2 bits (77), Expect = 0.025
Identities = 41/228 (17%), Positives = 79/228 (34%), Gaps = 15/228 (6%)
Query: 324 PDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLS 383
PD L++ I ++ T + + +++ + I NL
Sbjct: 14 PDPALANAIKIA---AGKSNVTDTVT--QADLDGITTLSAFGTGVTTIE--GVQYLNNLI 66
Query: 384 KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPS 443
+ +KDN +T L G + + + L + +
Sbjct: 67 GLELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLA 126
Query: 444 SIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVG 503
+ NL+ L + + L + + N VS + +L+ L+ L
Sbjct: 127 GLSNLQVLYLDLNQITNISPLAGLTNL-----QYLSIGNAQVSDLTPLANLSKLTTLKAD 181
Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDN 551
+N + I + +L NL ++L +N + P LA SNL I++L N
Sbjct: 182 DNKISDISP-LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP
{Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Length = 313
Score = 56.7 bits (135), Expect = 2e-09
Identities = 48/257 (18%), Positives = 92/257 (35%), Gaps = 8/257 (3%)
Query: 236 GELKNLVTLDLAHNHLE---ELPKEIGNCTMLVTLDLQ--HNELVNIPDMLGNLINLTRL 290
+ + LDL+ +L +P + N L L + +N + IP + L L L
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106
Query: 291 RLSYNRLESVPETLSK-CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPS 349
+++ + L + ALS +SSL ++ IT N+ +
Sbjct: 107 YITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
Query: 350 GGPTQFTS-VYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTEL 408
F+ S+ N++ F+ ++ L + G+ ++
Sbjct: 167 DSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKI 226
Query: 409 NLGTNQISKLSEDIQNLVNLEVLVLSNN-LLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
+L N ++ + NL L L NN + LP + L+ L L++ N L +
Sbjct: 227 HLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
Query: 468 IGFLKELQRLILQSNQL 484
G L+ +N+
Sbjct: 287 GGNLQRFDVSAYANNKC 303
Score = 55.5 bits (132), Expect = 6e-09
Identities = 52/272 (19%), Positives = 104/272 (38%), Gaps = 10/272 (3%)
Query: 279 DMLGNLINLTRLRLSYNRLE---SVPETLSKCVHLNEFNVEGCA-LSSLPDGLLSSLTSI 334
D + L LS L +P +L+ +LN + G L ++ LT +
Sbjct: 44 DTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQL 103
Query: 335 NNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN-LLT 393
+ + ++ + +Q ++ +++F +N + S NL + N +
Sbjct: 104 HYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISG 163
Query: 394 SLPLDLGTWVGLTELNLGT-NQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLK 452
++P G++ L + N+++ +NL + LS N+L+ S + K
Sbjct: 164 AIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNT 223
Query: 453 CLDLEENKLESLPNEIGFLKELQRLI-LQSNQLV-SLPRAIGHLTNLSYLSVGENNLQSI 510
+ L + + L++N++ +LP+ + L L L+V NNL
Sbjct: 224 QKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283
Query: 511 PEEIGTLENLHTLYLNDNTCLNNIPFELALCS 542
+ G L+ +N CL P L C+
Sbjct: 284 IPQGGNLQRFDVSAYANNKCLCGSP--LPACT 313
Score = 52.8 bits (125), Expect = 4e-08
Identities = 48/252 (19%), Positives = 87/252 (34%), Gaps = 5/252 (1%)
Query: 215 LSNLSMLSMRDNKIRELPPELGELKNLVTLDLA--HNHLEELPKEIGNCTMLVTLDLQHN 272
++NL + + K +P L L L L + +N + +P I T L L + H
Sbjct: 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHT 111
Query: 273 ELVNIPDMLGNLINL--TRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSS 330
+ + I T ++P ++S +L +G +S S
Sbjct: 112 NVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS 171
Query: 331 LTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
+ + ++ ++ N ++ +F KN K+++ N
Sbjct: 172 FSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKN 231
Query: 391 LLTSLPLDLGTWVGLTELNLGTNQIS-KLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLR 449
L +G L L+L N+I L + + L L L +S N L GNL+
Sbjct: 232 SLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQ 291
Query: 450 KLKCLDLEENKL 461
+ NK
Sbjct: 292 RFDVSAYANNKC 303
Score = 52.1 bits (123), Expect = 7e-08
Identities = 49/257 (19%), Positives = 83/257 (32%), Gaps = 8/257 (3%)
Query: 259 GNCTMLVTLDLQHNELVN---IPDMLGNLINLTRLRLS--YNRLESVPETLSKCVHLNEF 313
+ LDL L IP L NL L L + N + +P ++K L+
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106
Query: 314 NVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPY 373
+ +S LS + ++ + S N + + ++ I F+ N+I
Sbjct: 107 YITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
Query: 374 GIFSRAKNLSKVNMKDN--LLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVL 431
+ L L +P S + N + +
Sbjct: 167 DSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKI 226
Query: 432 VLSNNLLKKLPSSIGNLRKLKCLDLEENKLE-SLPNEIGFLKELQRLILQSNQLVSLPRA 490
L+ N L +G + L LDL N++ +LP + LK L L + N L
Sbjct: 227 HLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
Query: 491 IGHLTNLSYLSVGENNL 507
G+L + N
Sbjct: 287 GGNLQRFDVSAYANNKC 303
Score = 48.6 bits (114), Expect = 9e-07
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 209 HPDIQYLSNLSMLSMRDNKIR-ELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTL 267
+ NL+ L +R+N+I LP L +LK L +L+++ N+L + GN
Sbjct: 237 LGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVS 296
Query: 268 DLQHN 272
+N
Sbjct: 297 AYANN 301
Score = 44.7 bits (104), Expect = 2e-05
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 130 YLYGNKL-ASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKL 182
L N++ +LP + + L L ++ N+L NLQ+ V +NK
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKC 303
Score = 42.8 bits (99), Expect = 6e-05
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Query: 154 LAENSLT-SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR 204
L N + +LP L L+ L L++ N L L + N+
Sbjct: 251 LRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK 302
Score = 42.4 bits (98), Expect = 9e-05
Identities = 41/300 (13%), Positives = 76/300 (25%), Gaps = 46/300 (15%)
Query: 141 SQIGYVTNLTCLGLAENSLT---SLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKI 197
+ L L+ +L +P SLANL L L +
Sbjct: 44 DTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGI----------------- 86
Query: 198 LYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKE 257
N + + P I L+ L L + +
Sbjct: 87 ----NNLVGPIPPAIAKLTQLHYLYITHT---------------------NVSGAIPDFL 121
Query: 258 IGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEG 317
T++ + +P + +L NL + NR+ ++
Sbjct: 122 SQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI 181
Query: 318 CALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFS 377
+ + G
Sbjct: 182 SRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVG 241
Query: 378 RAKNLSKVNMKDNLLT-SLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNN 436
+KNL+ +++++N + +LP L L LN+ N + NL +V +NN
Sbjct: 242 LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANN 301
Score = 41.7 bits (96), Expect = 2e-04
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 176 DLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNK 227
DLR+N++ LP + +L L L + FN + P L + + +NK
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK 302
Score = 38.6 bits (88), Expect = 0.002
Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 98 CKEENILNLDLSKSSIT-HLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE 156
+N+ LDL + I LP + +L L L + N L Q G + A
Sbjct: 241 GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYAN 300
Query: 157 NS-LTSLP 163
N L P
Sbjct: 301 NKCLCGSP 308
Score = 28.2 bits (61), Expect = 2.7
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLS-QIPS 559
NL+ L L +N +P L L +++ L +IP
Sbjct: 245 NLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
Score = 27.4 bits (59), Expect = 4.4
Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Query: 492 GHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCL-NNIPFELALCSNLQIMSLD 550
+ NL + IP + L L+ LY+ L IP +A + L + +
Sbjct: 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYIT 109
Query: 551 NCP 553
+
Sbjct: 110 HTN 112
Score = 27.0 bits (58), Expect = 6.7
Identities = 29/131 (22%), Positives = 43/131 (32%), Gaps = 7/131 (5%)
Query: 424 NLVNLEVLVLSNNLLKK---LPSSIGNLRKLKCLDLE--ENKLESLPNEIGFLKELQRLI 478
+ L LS L K +PSS+ NL L L + N + +P I L +L L
Sbjct: 48 QTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLY 107
Query: 479 LQSNQLVSLPRAIGHLTNLSYLSVGENNL--QSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
+ + N ++P I +L NL + + N IP
Sbjct: 108 ITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD 167
Query: 537 ELALCSNLQIM 547
S L
Sbjct: 168 SYGSFSKLFTS 178
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes
[TaxId: 1639]}
Length = 210
Score = 54.6 bits (130), Expect = 4e-09
Identities = 50/207 (24%), Positives = 80/207 (38%), Gaps = 25/207 (12%)
Query: 83 EPIQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQ 142
E I I++ F + +L K S+T E L ++++ + + S+
Sbjct: 6 ETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQNE-LNSIDQIIANNSDIKSVQG- 63
Query: 143 IGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRF 202
I Y+ N+T L L N LT LANL+ L L L NK+ +L + +
Sbjct: 64 IQYLPNVTKLFLNGNKLTD-IKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHN 122
Query: 203 NR--------------------IKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLV 242
T + L+ L LS+ DN+I ++ P L L L
Sbjct: 123 GISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQ 181
Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDL 269
L L+ NH+ +L + L L+L
Sbjct: 182 NLYLSKNHISDLR-ALAGLKNLDVLEL 207
Score = 43.8 bits (102), Expect = 2e-05
Identities = 27/197 (13%), Positives = 67/197 (34%), Gaps = 11/197 (5%)
Query: 260 NCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCA 319
+ +L+ + + L ++ ++ + + ++SV + ++ + + G
Sbjct: 22 AFAETIKDNLKKKSVTDAVT-QNELNSIDQIIANNSDIKSVQG-IQYLPNVTKLFLNGNK 79
Query: 320 LSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRA 379
L+ + L++L ++ + L NK S + S+ +
Sbjct: 80 LTDIKP--LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLE 137
Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
N ++ L + L + + + L L+ L LS N +
Sbjct: 138 SLYLGNNKITDITVLSRLTKLDTLSLEDNQISD------IVPLAGLTKLQNLYLSKNHIS 191
Query: 440 KLPSSIGNLRKLKCLDL 456
L ++ L+ L L+L
Sbjct: 192 DLR-ALAGLKNLDVLEL 207
Score = 43.5 bits (101), Expect = 3e-05
Identities = 35/218 (16%), Positives = 78/218 (35%), Gaps = 18/218 (8%)
Query: 272 NELVNIPDMLG------NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
+E + +P + + L + T ++ +++ + S+
Sbjct: 5 SETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAV-TQNELNSIDQIIANNSDIKSVQG 63
Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
+ L ++ + L+ NK T ++ ++ + +K+ + K
Sbjct: 64 --IQYLPNVTKLFLNGNKLT-----DIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKS 116
Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
++ S L L L LG N+I+ ++ + + + N + +P +
Sbjct: 117 LSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--L 174
Query: 446 GNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQ 483
L KL+ L L +N + L + LK L L L +Q
Sbjct: 175 AGLTKLQNLYLSKNHISDLR-ALAGLKNLDVLEL-FSQ 210
Score = 35.8 bits (81), Expect = 0.009
Identities = 30/155 (19%), Positives = 51/155 (32%), Gaps = 7/155 (4%)
Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESL 464
+ ++ + I + + IQ L N+ L L+ N L + I L LK L +
Sbjct: 48 IDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKL----TDIKPLANLKNLGWLFLDENKV 102
Query: 465 PNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLY 524
+ + L NN + + L L TL
Sbjct: 103 KDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLS 162
Query: 525 LNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPS 559
L DN + +P A + LQ + L +S + +
Sbjct: 163 LEDNQISDIVPL--AGLTKLQNLYLSKNHISDLRA 195
Score = 31.9 bits (71), Expect = 0.16
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 490 AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
+ LT L L + +N++ + + L+NL L L
Sbjct: 173 PLAGLTKLQNLYLSKNHISDLR-ALAGLKNLDVLEL 207
Score = 30.7 bits (68), Expect = 0.30
Identities = 10/61 (16%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 447 NLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN 506
+ +L++ + + L + ++I ++ + S+ I +L N++ L + N
Sbjct: 22 AFAETIKDNLKKKSVTDAVTQ-NELNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNK 79
Query: 507 L 507
L
Sbjct: 80 L 80
Score = 29.6 bits (65), Expect = 0.92
Identities = 12/82 (14%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
Query: 471 LKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTC 530
E + L+ + L ++ + ++++S+ I L N+ L+LN N
Sbjct: 23 FAETIKDNLKKKSVTDAV-TQNELNSIDQIIANNSDIKSVQG-IQYLPNVTKLFLNGNKL 80
Query: 531 LNNIPFELALCSNLQIMSLDNC 552
+ P + +
Sbjct: 81 TDIKPLANLKNLGWLFLDENKV 102
Score = 26.9 bits (58), Expect = 5.7
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 102 NILNLDLSKSSITHLPPSVEKLTHLEELYLYG 133
+ NL LSK+ I+ L + L +L+ L L+
Sbjct: 179 KLQNLYLSKNHISDLRA-LAGLKNLDVLELFS 209
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain
{Fission yeast (Schizosaccharomyces pombe) [TaxId:
4896]}
Length = 344
Score = 49.9 bits (117), Expect = 4e-07
Identities = 44/340 (12%), Positives = 91/340 (26%), Gaps = 34/340 (10%)
Query: 148 NLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNE-----LPMVVYKLTSLKILYLRF 202
+L + S+ L ++ + L N + L + L+I
Sbjct: 9 SLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSD 68
Query: 203 NRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCT 262
V +I +R L L + L T+ L+ N +E
Sbjct: 69 IFTGRVKDEI------------PEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDF 116
Query: 263 MLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
+ L+H L N + R + + N
Sbjct: 117 LSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMK 176
Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
S ++ + + +N Y + + + +
Sbjct: 177 EWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALA 236
Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVN--LEVLVLSNNLL-- 438
+ N +GL + L + + + L N L+ L L N +
Sbjct: 237 IALKSWPN---------LRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 287
Query: 439 ---KKLPSSI-GNLRKLKCLDLEENKLESLPNEIGFLKEL 474
+ L + I + L L+L N+ + + ++E+
Sbjct: 288 DAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREV 327
Score = 44.9 bits (104), Expect = 2e-05
Identities = 38/366 (10%), Positives = 86/366 (23%), Gaps = 44/366 (12%)
Query: 104 LNLD-LSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSL 162
L LD ++ + + + ++E+ L GN + + L
Sbjct: 10 LKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNT------------------IGTEAARWL 51
Query: 163 PDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
+++A+ + L + + + + + L + +
Sbjct: 52 SENIASKKDLEIAEFSDIFTGRVK---------DEIPEALRLLLQALLKCPKLHTVRLSD 102
Query: 223 MRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLG 282
+ P K+ G + + + +
Sbjct: 103 NAFGPTAQEPLIDFLSKH-------TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAK 155
Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
N L + NRLE+ + + + +
Sbjct: 156 NAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQ 215
Query: 343 KFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTW 402
+ T S + + LS +
Sbjct: 216 ELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVV---DAFSKLEN 272
Query: 403 VGLTELNLGTNQISK-----LSEDIQ-NLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDL 456
+GL L L N+I L I + +L L L+ N + + +R++
Sbjct: 273 IGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRG 332
Query: 457 EENKLE 462
E
Sbjct: 333 RGELDE 338
Score = 44.9 bits (104), Expect = 2e-05
Identities = 40/324 (12%), Positives = 88/324 (27%), Gaps = 25/324 (7%)
Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHL-----EELPKEIGNCTMLVTLDLQH 271
+L + ++ + + L E ++ + L+ N + L + I + L +
Sbjct: 9 SLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSD 68
Query: 272 NELVNIPDMLGNLI---------NLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSS 322
+ D + + + + P + + L
Sbjct: 69 IFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYL 128
Query: 323 LPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNL 382
+GL + L P + + N N K F + L
Sbjct: 129 HNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLL 188
Query: 383 SKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP 442
V M N + ++ GL + + + + L + +
Sbjct: 189 HTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL 248
Query: 443 SSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL-----VSLPRAI-GHLTN 496
L + + L N LQ L LQ N++ +L I + +
Sbjct: 249 GLNDCLLSARGAAAVVDAFSKLEN-----IGLQTLRLQYNEIELDAVRTLKTVIDEKMPD 303
Query: 497 LSYLSVGENNLQSIPEEIGTLENL 520
L +L + N + + + +
Sbjct: 304 LLFLELNGNRFSEEDDVVDEIREV 327
Score = 40.6 bits (93), Expect = 4e-04
Identities = 13/93 (13%), Positives = 29/93 (31%), Gaps = 5/93 (5%)
Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQL-----VSLPRAIGHLTNLSYLSVG 503
+ LK + +S+ + ++ ++L N + L I +L
Sbjct: 8 KSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFS 67
Query: 504 ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPF 536
+ + +EI L L L+ +
Sbjct: 68 DIFTGRVKDEIPEALRLLLQALLKCPKLHTVRL 100
Score = 38.7 bits (88), Expect = 0.002
Identities = 11/88 (12%), Positives = 27/88 (30%), Gaps = 5/88 (5%)
Query: 472 KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNL-----QSIPEEIGTLENLHTLYLN 526
K L+ + + S+ + ++ + + N + + + E I + ++L +
Sbjct: 8 KSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFS 67
Query: 527 DNTCLNNIPFELALCSNLQIMSLDNCPL 554
D L L L
Sbjct: 68 DIFTGRVKDEIPEALRLLLQALLKCPKL 95
Score = 36.8 bits (83), Expect = 0.007
Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS-----KLSEDIQNLVNLEVLVLS 434
K+L + S+ L + E+ L N I LSE+I + +LE+ S
Sbjct: 8 KSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFS 67
Query: 435 NNLLKKLPSSI 445
+ ++ I
Sbjct: 68 DIFTGRVKDEI 78
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 48.0 bits (112), Expect = 1e-06
Identities = 31/233 (13%), Positives = 63/233 (27%), Gaps = 13/233 (5%)
Query: 243 TLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIP-DMLGNLINLTRLRLSYNRLESVP 301
+ + E+P ++ + L +L I +L ++ +S N + V
Sbjct: 12 VFLCQESKVTEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVI 69
Query: 302 ETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSI 361
E + ++L + ++ N+ T
Sbjct: 70 EADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQK 129
Query: 362 NFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGT------WVGLTELNLGTNQI 415
Q + + I + L + N +
Sbjct: 130 VLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNL 189
Query: 416 SKLSEDI-QNLVNLEVLVLSNNLLKKLPSSI-GNLRKLKCLDLEENKLESLPN 466
+L D+ +L +S + LPS NL+KL+ L+ LP
Sbjct: 190 EELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKKLPT 240
Score = 46.8 bits (109), Expect = 2e-06
Identities = 34/229 (14%), Positives = 73/229 (31%), Gaps = 13/229 (5%)
Query: 224 RDNKIRELPPELGELKNLVTLDLAHNHLEELPKE-IGNCTMLVTLDLQHNELVNIPDMLG 282
+++K+ E+P +L +N + L L + K L +++ N+++ + +
Sbjct: 16 QESKVTEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADV 73
Query: 283 NLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRN 342
+ + ++ + ++ L + + +
Sbjct: 74 FSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLD 133
Query: 343 KFTAYPSGGPTQFTSVY------SINFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLP 396
+ + V + N I +I F+ + +N L LP
Sbjct: 134 IQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELP 193
Query: 397 LD-LGTWVGLTELNLGTNQISKLSEDI-QNLVNLEVLVLSNNLLKKLPS 443
D G L++ +I L +NL L S LKKLP+
Sbjct: 194 NDVFHGASGPVILDISRTRIHSLPSYGLENLKKLR--ARSTYNLKKLPT 240
Score = 41.0 bits (94), Expect = 2e-04
Identities = 35/248 (14%), Positives = 78/248 (31%), Gaps = 22/248 (8%)
Query: 266 TLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
Q +++ IP L N LR +L + + A S D
Sbjct: 12 VFLCQESKVTEIPSDL--PRNAIELRFVLTKLRVIQKG---------------AFSGFGD 54
Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKV 385
++ + + + + + N + + + +S
Sbjct: 55 LEKIEISQNDVLEVIEADVF-SNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNT 113
Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
+K L + + N+ + I + S + ++ + + N + + +
Sbjct: 114 GIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAF 173
Query: 446 GNLRKLKCLDLEENKLESLPNEI-GFLKELQRLILQSNQLVSLP-RAIGHLTNLSYLSVG 503
+ + + N LE LPN++ L + ++ SLP + +L L S
Sbjct: 174 NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST- 232
Query: 504 ENNLQSIP 511
NL+ +P
Sbjct: 233 -YNLKKLP 239
Score = 40.7 bits (93), Expect = 3e-04
Identities = 38/231 (16%), Positives = 69/231 (29%), Gaps = 16/231 (6%)
Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPS---------QIGYVTNLTCLGLAE 156
+S +T +P + + EL KL + + ++ L + E
Sbjct: 13 FLCQESKVTEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIE 70
Query: 157 NSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLS 216
+ S L ++ + +L + + L +
Sbjct: 71 ADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKV 130
Query: 217 NLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVN 276
L + + E +G V L L N ++E+ N T L L+L N +
Sbjct: 131 LLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLE 190
Query: 277 --IPDMLGNLINLTRLRLSYNRLESVP-ETLSKCVHLNEFNVEGCALSSLP 324
D+ L +S R+ S+P L L + L LP
Sbjct: 191 ELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKKLP 239
Score = 38.7 bits (88), Expect = 0.001
Identities = 29/230 (12%), Positives = 60/230 (26%), Gaps = 13/230 (5%)
Query: 125 HLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLP-DSLANLQQLRVLDLRHNK-- 181
+K+ +PS + N L L + + + L +++ N
Sbjct: 9 SNRVFLCQESKVTEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVL 66
Query: 182 --LNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELK 239
+ + N + Q L NL L + + I+ LP
Sbjct: 67 EVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHS 126
Query: 240 NLVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLES 299
L +++ E + L + N + N N ++
Sbjct: 127 LQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDN 186
Query: 300 ------VPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNK 343
+ ++ + SLP L +L + + K
Sbjct: 187 NNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK 236
Score = 36.8 bits (83), Expect = 0.004
Identities = 10/46 (21%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Query: 490 AIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIP 535
+ L + + S+P LENL L L +P
Sbjct: 196 VFHGASGPVILDISRTRIHSLPSYG--LENLKKLRARSTYNLKKLP 239
Score = 36.8 bits (83), Expect = 0.004
Identities = 31/227 (13%), Positives = 70/227 (30%), Gaps = 14/227 (6%)
Query: 156 ENSLTSLPDSLANLQQLRVLDLRHNKLNELP-MVVYKLTSLKILYLRFNR----IKTVHP 210
E+ +T +P L + L KL + L+ + + N I+
Sbjct: 17 ESKVTEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVF 74
Query: 211 DIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNCTMLVTLDLQ 270
+ + +N + P L NL L +++ ++ LP ++ L
Sbjct: 75 SNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDI 134
Query: 271 HNELVNIPDMLGNLINLTR-----LRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLPD 325
+ + + + L+ E + + L LP+
Sbjct: 135 QDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPN 194
Query: 326 GLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIP 372
+ + + +SR + + PS G + + + + K+P
Sbjct: 195 DVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKKLP 239
Score = 32.6 bits (72), Expect = 0.10
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 102 NILNLDLSKSSITHLPPSV-EKLTHLEELYLYGNKLASLPS 141
+ LD+S++ I LP E L L Y K LP+
Sbjct: 202 GPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK--KLPT 240
Score = 29.5 bits (64), Expect = 0.95
Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Query: 333 SINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNM 387
S +K T PS P + + F ++ I G FS +L K+ +
Sbjct: 9 SNRVFLCQESKVTEIPSDLPR---NAIELRFVLTKLRVIQKGAFSGFGDLEKIEI 60
Score = 29.1 bits (63), Expect = 1.5
Identities = 5/50 (10%), Positives = 15/50 (30%), Gaps = 2/50 (4%)
Query: 510 IPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPS 559
+ L ++ + + L L+ + L ++P+
Sbjct: 193 PNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLR--ARSTYNLKKLPT 240
Score = 28.3 bits (61), Expect = 2.2
Identities = 10/58 (17%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Query: 480 QSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEE-IGTLENLHTLYLNDNTCLNNIPF 536
Q +++ +P + N L L+ I + +L + ++ N L I
Sbjct: 16 QESKVTEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEA 71
Score = 28.0 bits (60), Expect = 3.1
Identities = 7/41 (17%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 427 NLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNE 467
+ V + + + ++PS + R L KL +
Sbjct: 9 SNRVFLCQESKVTEIPSDL--PRNAIELRFVLTKLRVIQKG 47
Score = 28.0 bits (60), Expect = 3.2
Identities = 7/55 (12%), Positives = 14/55 (25%)
Query: 519 NLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSLIIRYL 573
++N S I+ + + +PS + L R
Sbjct: 178 LDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 232
Score = 26.4 bits (56), Expect = 9.6
Identities = 5/52 (9%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLP-SSIGNLRKLKCLDL 456
++++++ D+ N L L+ + + L+ +++
Sbjct: 11 RVFLCQESKVTEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEI 60
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes
[TaxId: 1639]}
Length = 199
Score = 47.4 bits (111), Expect = 1e-06
Identities = 36/202 (17%), Positives = 71/202 (35%), Gaps = 23/202 (11%)
Query: 85 IQADLNIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIG 144
I D I + F + L K+++T S L + L + S+ +
Sbjct: 2 ITQDTPINQIFTDTALAEKMKTVLGKTNVTD-TVSQTDLDQVTTLQADRLGIKSIDG-VE 59
Query: 145 YVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNR 204
Y+ NLT + + N LT + + + +L + + P+ + L+
Sbjct: 60 YLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQIT 119
Query: 205 IKTVHPDIQYLSNLSMLSMR-------------------DNKIRELPPELGELKNLVTLD 245
++ L+ L + S N++ +L P L L L LD
Sbjct: 120 DIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKP-LANLTTLERLD 178
Query: 246 LAHNHLEELPKEIGNCTMLVTL 267
++ N + ++ + T L +L
Sbjct: 179 ISSNKVSDIS-VLAKLTNLESL 199
Score = 44.3 bits (103), Expect = 1e-05
Identities = 31/192 (16%), Positives = 61/192 (31%), Gaps = 8/192 (4%)
Query: 121 EKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHN 180
L + L + SQ + +T L + S+ D + L L ++ +N
Sbjct: 15 TALAEKMKTVLGKTNVTDTVSQ-TDLDQVTTLQADRLGIKSI-DGVEYLNNLTQINFSNN 72
Query: 181 KLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKN 240
+L ++ + + IL L + L L
Sbjct: 73 QLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNR 132
Query: 241 LVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESV 300
L + + L + + N++ ++ L NL L RL +S N++ +
Sbjct: 133 LELSSNTISDISALSGLTSLQQL----NFSSNQVTDLKP-LANLTTLERLDISSNKVSDI 187
Query: 301 PETLSKCVHLNE 312
L+K +L
Sbjct: 188 SV-LAKLTNLES 198
Score = 40.8 bits (94), Expect = 2e-04
Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 15/213 (7%)
Query: 265 VTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCALSSLP 324
+T D N++ D L + L + + + + + + S+
Sbjct: 2 ITQDTPINQI--FTD--TALAEKMKTVLGKTNVTDTV-SQTDLDQVTTLQADRLGIKSID 56
Query: 325 DGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSK 384
+ L ++ I S N+ T T ++ + ++I
Sbjct: 57 G--VEYLNNLTQINFSNNQLT-----DITPLKNLTKLVDILMNNNQIADITPLANLTNLT 109
Query: 385 VNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSS 444
N + L L L L +N IS +S ++ SN +
Sbjct: 110 GLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTD--LKP 167
Query: 445 IGNLRKLKCLDLEENKLESLPNEIGFLKELQRL 477
+ NL L+ LD+ NK+ + + L L+ L
Sbjct: 168 LANLTTLERLDISSNKVSDIS-VLAKLTNLESL 199
Score = 31.2 bits (69), Expect = 0.27
Identities = 31/195 (15%), Positives = 61/195 (31%), Gaps = 10/195 (5%)
Query: 329 SSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAKNLSKVNMK 388
++L L + T S T V ++ + I I NL+++N
Sbjct: 15 TALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSID--GVEYLNNLTQINFS 70
Query: 389 DNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNL 448
+N LT + + L + L + ++ NL
Sbjct: 71 NNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNL 130
Query: 449 RKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ 508
+L+ + + + S+ V+ + + +LT L L + N +
Sbjct: 131 NRLELSSNTIS-----DISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKVS 185
Query: 509 SIPEEIGTLENLHTL 523
I + L NL +L
Sbjct: 186 DIS-VLAKLTNLESL 199
Score = 27.3 bits (59), Expect = 4.2
Identities = 28/184 (15%), Positives = 56/184 (30%), Gaps = 22/184 (11%)
Query: 380 KNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLK 439
K + +T + +T L I + + ++ L NL + SNN L
Sbjct: 18 AEKMKTVLGKTNVTD-TVSQTDLDQVTTLQADRLGIKSI-DGVEYLNNLTQINFSNNQLT 75
Query: 440 KLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIGHLTNLSY 499
+ + + L + P L + + + +L L
Sbjct: 76 DITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 135
Query: 500 LSVG------------------ENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELALC 541
S +N + + + L L L ++ N +++I LA
Sbjct: 136 SSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSN-KVSDIS-VLAKL 193
Query: 542 SNLQ 545
+NL+
Sbjct: 194 TNLE 197
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 162
Score = 46.5 bits (109), Expect = 1e-06
Identities = 24/148 (16%), Positives = 55/148 (37%), Gaps = 3/148 (2%)
Query: 412 TNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFL 471
T ++ + + N V L L + + + L + +D +N++ L
Sbjct: 4 TAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLR 63
Query: 472 KELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIP--EEIGTLENLHTLYLNDNT 529
+ L+ + L +L+ L + N+L + + + +L++L L + N
Sbjct: 64 RLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNP 123
Query: 530 CLNNIPFELALCSNL-QIMSLDNCPLSQ 556
N + L + + Q+ LD +
Sbjct: 124 VTNKKHYRLYVIYKVPQVRVLDFQKVKL 151
Score = 46.1 bits (108), Expect = 1e-06
Identities = 29/139 (20%), Positives = 49/139 (35%), Gaps = 8/139 (5%)
Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNL 218
L N + R LDLR K+ + + L + N I+ + L L
Sbjct: 7 LIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKL-DGFPLLRRL 65
Query: 219 SMLSMRDNKIRE-LPPELGELKNLVTLDLAHNHLEELP--KEIGNCTMLVTLDLQHNELV 275
L + +N+I L +L L L +N L EL + + L L + N +
Sbjct: 66 KTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 125
Query: 276 NIPD----MLGNLINLTRL 290
N ++ + + L
Sbjct: 126 NKKHYRLYVIYKVPQVRVL 144
Score = 41.1 bits (95), Expect = 7e-05
Identities = 26/131 (19%), Positives = 42/131 (32%), Gaps = 8/131 (6%)
Query: 147 TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIK 206
L L + + + A L Q +D N++ +L L LK L + NRI
Sbjct: 18 VRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDG-FPLLRRLKTLLVNNNRIC 76
Query: 207 TVHPDIQY---LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELP----KEIG 259
+ + +L+ L LK+L L + N + I
Sbjct: 77 RIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIY 136
Query: 260 NCTMLVTLDLQ 270
+ LD Q
Sbjct: 137 KVPQVRVLDFQ 147
Score = 39.5 bits (91), Expect = 3e-04
Identities = 22/146 (15%), Positives = 47/146 (32%), Gaps = 3/146 (2%)
Query: 246 LAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLS 305
L +E+ + N LDL+ ++ I ++ L + S N + +
Sbjct: 3 LTAELIEQAAQYT-NAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGF-P 60
Query: 306 KCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPT-QFTSVYSINFE 364
L V + + +GL +L + + L+ N P S+ +
Sbjct: 61 LLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCIL 120
Query: 365 HNQIDKIPYGIFSRAKNLSKVNMKDN 390
N + + + +V + D
Sbjct: 121 RNPVTNKKHYRLYVIYKVPQVRVLDF 146
Score = 39.2 bits (90), Expect = 4e-04
Identities = 22/135 (16%), Positives = 49/135 (36%), Gaps = 8/135 (5%)
Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDL 177
EL L G K+ + + + + ++N + L L++L+ L +
Sbjct: 12 AQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGF-PLLRRLKTLLV 70
Query: 178 RHNKLNE-LPMVVYKLTSLKILYLRFNRIKTVHPD--IQYLSNLSMLSMRDNKIRELPPE 234
+N++ + L L L L N + + + L +L+ L + N +
Sbjct: 71 NNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHY 130
Query: 235 ----LGELKNLVTLD 245
+ ++ + LD
Sbjct: 131 RLYVIYKVPQVRVLD 145
Score = 38.0 bits (87), Expect = 0.001
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 405 LTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLES- 463
EL+L +I + L + + S+N ++KL LR+LK L + N++
Sbjct: 20 DRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNNRICRI 78
Query: 464 LPNEIGFLKELQRLILQSNQLVSLP 488
L +L LIL +N LV L
Sbjct: 79 GEGLDQALPDLTELILTNNSLVELG 103
Score = 34.5 bits (78), Expect = 0.012
Identities = 24/131 (18%), Positives = 40/131 (30%), Gaps = 6/131 (4%)
Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDS 165
LDL I + L + + N++ L T L
Sbjct: 23 LDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGL 82
Query: 166 LANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPD------IQYLSNLS 219
L L L L +N L EL + + + YL R + I + +
Sbjct: 83 DQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVR 142
Query: 220 MLSMRDNKIRE 230
+L + K++E
Sbjct: 143 VLDFQKVKLKE 153
Score = 30.3 bits (67), Expect = 0.37
Identities = 25/132 (18%), Positives = 50/132 (37%), Gaps = 8/132 (6%)
Query: 376 FSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSN 435
++ A +++++ + + T ++ N+I KL + L L+ L+++N
Sbjct: 14 YTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNN 72
Query: 436 NLLK-KLPSSIGNLRKLKCLDLEENKLESLP--NEIGFLKELQRLILQSNQLVSLP---- 488
N + L L L L N L L + + LK L L + N + +
Sbjct: 73 NRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRL 132
Query: 489 RAIGHLTNLSYL 500
I + + L
Sbjct: 133 YVIYKVPQVRVL 144
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo
sapiens) [TaxId: 9606]}
Length = 162
Score = 45.6 bits (107), Expect = 2e-06
Identities = 23/131 (17%), Positives = 45/131 (34%), Gaps = 4/131 (3%)
Query: 433 LSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSLPRAIG 492
L +++L + L+ L S P+ + L +S+ +L
Sbjct: 4 LKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPD-LVAQNIDVVLNRRSSMAATLRIIEE 62
Query: 493 HLTNLSYLSVGENNL---QSIPEEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSL 549
++ L L++ N L + + NL L L+ N + + L+ + L
Sbjct: 63 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWL 122
Query: 550 DNCPLSQIPSE 560
D LS +
Sbjct: 123 DGNSLSDTFRD 133
Score = 45.6 bits (107), Expect = 2e-06
Identities = 28/140 (20%), Positives = 53/140 (37%), Gaps = 5/140 (3%)
Query: 107 DLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLPDSL 166
+L + L + K + L L S P + L + +L
Sbjct: 3 ELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPD-LVAQNIDVVLNRRSSMAATLRIIE 61
Query: 167 ANLQQLRVLDLRHNKL---NELPMVVYKLTSLKILYLRFNRIKTVHP-DIQYLSNLSMLS 222
N+ +L L+L +N+L +++ +V K +LKIL L N +K+ D L L
Sbjct: 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELW 121
Query: 223 MRDNKIRELPPELGELKNLV 242
+ N + + + + +
Sbjct: 122 LDGNSLSDTFRDQSTYISAI 141
Score = 42.5 bits (99), Expect = 2e-05
Identities = 26/143 (18%), Positives = 51/143 (35%), Gaps = 5/143 (3%)
Query: 154 LAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQ 213
L + L ++ L L P +V +L R + T+ +
Sbjct: 4 LKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLV-AQNIDVVLNRRSSMAATLRIIEE 62
Query: 214 YLSNLSMLSMRDNKIR---ELPPELGELKNLVTLDLAHNHLEELPK-EIGNCTMLVTLDL 269
+ L L++ +N++ ++ + + NL L+L+ N L+ + + L L L
Sbjct: 63 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWL 122
Query: 270 QHNELVNIPDMLGNLINLTRLRL 292
N L + I+ R R
Sbjct: 123 DGNSLSDTFRDQSTYISAIRERF 145
Score = 39.8 bits (92), Expect = 2e-04
Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 5/139 (3%)
Query: 200 LRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIG 259
L+ +++ + + + S ++ +R P +L V L+ + L
Sbjct: 4 LKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDP-DLVAQNIDVVLNRRSSMAATLRIIEE 62
Query: 260 NCTMLVTLDLQHNELVN---IPDMLGNLINLTRLRLSYNRLESVPE-TLSKCVHLNEFNV 315
N L++L+L +N L + ++ NL L LS N L+S E K + L E +
Sbjct: 63 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWL 122
Query: 316 EGCALSSLPDGLLSSLTSI 334
+G +LS + +++I
Sbjct: 123 DGNSLSDTFRDQSTYISAI 141
Score = 37.9 bits (87), Expect = 0.001
Identities = 24/132 (18%), Positives = 47/132 (35%), Gaps = 5/132 (3%)
Query: 386 NMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSI 445
+K + L L + ++ L + D+ VL +++ L
Sbjct: 3 ELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSD-PDLVAQNIDVVLNRRSSMAATLRIIE 61
Query: 446 GNLRKLKCLDLEENKL---ESLPNEIGFLKELQRLILQSNQLVSLPR-AIGHLTNLSYLS 501
N+ +L L+L N+L + + + + L+ L L N+L S L L
Sbjct: 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELW 121
Query: 502 VGENNLQSIPEE 513
+ N+L +
Sbjct: 122 LDGNSLSDTFRD 133
Score = 37.5 bits (86), Expect = 0.001
Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 7/126 (5%)
Query: 90 NIEKEFLRCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNL 149
++ + + + LDL P + L + A+L + L
Sbjct: 11 QLKLIMSKRYDGSQQALDLKG---LRSDPDLVAQNIDVVLNRRSSMAATLRIIEENIPEL 67
Query: 150 TCLGLAENSLTS---LPDSLANLQQLRVLDLRHNKLNELP-MVVYKLTSLKILYLRFNRI 205
L L+ N L + + L++L+L N+L + K L+ L+L N +
Sbjct: 68 LSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSL 127
Query: 206 KTVHPD 211
D
Sbjct: 128 SDTFRD 133
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae
(Chlamydomonas reinhardtii) [TaxId: 3055]}
Length = 198
Score = 46.2 bits (108), Expect = 3e-06
Identities = 25/141 (17%), Positives = 51/141 (36%), Gaps = 3/141 (2%)
Query: 423 QNLVNLEVLVLSNNL--LKKLPSSIGNLRKLKCLDLEENKLESLPNEIGFLKELQRLILQ 480
E + L + ++K+ +++ L+ K L L N +E + + + ++ L+ L L
Sbjct: 20 VVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKISS-LSGMENLRILSLG 78
Query: 481 SNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELAL 540
N + + L L + N + S+ + N+ +LA
Sbjct: 79 RNLIKKIENLDAVADTLEELWISYNQIASLSGIEKLVNLRVLYMSNNKITNWGEIDKLAA 138
Query: 541 CSNLQIMSLDNCPLSQIPSEI 561
L+ + L PL E
Sbjct: 139 LDKLEDLLLAGNPLYNDYKEN 159
Score = 36.6 bits (83), Expect = 0.004
Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 12/184 (6%)
Query: 76 KPTTKKKEPIQADLNIEKEFLRCKEENILNLDLS--KSSITHLPPSVEKLTHLEELYLYG 133
K TT I+ + I +E ++L I + ++ L + L L
Sbjct: 3 KATT-----IKDAIRIFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALST 57
Query: 134 NKLASLPSQIGYVTNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNKLNELPMVVYKLT 193
N + + S + + NL L L N ++L + + KL
Sbjct: 58 NNIEKISS-LSGMENLRILSLGRNL-IKKIENLDAVADTLEELWISYNQIASLSGIEKLV 115
Query: 194 SLKILYLRFNRIKTVHPDIQY--LSNLSMLSMRDNKIRELPPELGELKNLVTLDLAH-NH 250
+L++LY+ N+I + L L L + N + E + +
Sbjct: 116 NLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPN 175
Query: 251 LEEL 254
L++L
Sbjct: 176 LKKL 179
Score = 35.8 bits (81), Expect = 0.006
Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Query: 191 KLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNH 250
K T++K F K+V + L I ++ L LK L L+ N+
Sbjct: 3 KATTIKDAIRIFEERKSVVAT--EAEKVE-LHGMIPPIEKMDATLSTLKACKHLALSTNN 59
Query: 251 LEELPKEIGNCTMLVTLDLQHN 272
+E++ + L L L N
Sbjct: 60 IEKIS-SLSGMENLRILSLGRN 80
Score = 35.0 bits (79), Expect = 0.014
Identities = 29/148 (19%), Positives = 53/148 (35%), Gaps = 3/148 (2%)
Query: 407 ELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPN 466
EL+ I K+ + L + L LS N ++K+ S+ + L+ L L N ++ + N
Sbjct: 29 ELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKKIEN 87
Query: 467 EIGFLK-ELQRLILQSNQLVSLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHTLYL 525
+ I + + Y+S + +++ L+ L L L
Sbjct: 88 LDAVADTLEELWISYNQIASLSGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLL 147
Query: 526 NDNTCLNNIPFELALCSNLQIMSLDNCP 553
L N E S +I + P
Sbjct: 148 -AGNPLYNDYKENNATSEYRIEVVKRLP 174
Score = 33.1 bits (74), Expect = 0.049
Identities = 28/191 (14%), Positives = 49/191 (25%), Gaps = 15/191 (7%)
Query: 241 LVTLDLAHNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESV 300
T+ A EE + V L + + L L L LS N +E +
Sbjct: 4 ATTIKDAIRIFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKI 63
Query: 301 PETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYS 360
LS +L ++ L ++ A SG
Sbjct: 64 SS-LSGMENLRILSLGRN--LIKKIENLDAVADTLEELWISYNQIASLSGIEKLVNLRVL 120
Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKLSE 420
+ + + L + + N L + + E
Sbjct: 121 YMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEY------------RIE 168
Query: 421 DIQNLVNLEVL 431
++ L NL+ L
Sbjct: 169 VVKRLPNLKKL 179
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo
sapiens) [TaxId: 9606]}
Length = 460
Score = 46.5 bits (108), Expect = 6e-06
Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 13/89 (14%)
Query: 126 LEELYLYGNKL--ASLPSQIGYVTNLTCLGLAENSLT-----SLPDSLANLQQLRVLDLR 178
++ L + +L A + + + L + LT + +L L L+LR
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 179 HNKLNE------LPMVVYKLTSLKILYLR 201
N+L + L + ++ L L+
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQ 92
Score = 45.0 bits (104), Expect = 2e-05
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 405 LTELNLGTNQIS--KLSEDIQNLVNLEVLVLSNNLL-----KKLPSSIGNLRKLKCLDLE 457
+ L++ ++S + +E + L +V+ L + L K + S++ L L+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 458 ENKLESLPNEIGFLKELQRLILQSNQLVSL 487
N+L ++G LQ L S ++ L
Sbjct: 64 SNEL----GDVGVHCVLQGLQTPSCKIQKL 89
Score = 44.2 bits (102), Expect = 4e-05
Identities = 14/92 (15%), Positives = 32/92 (34%), Gaps = 13/92 (14%)
Query: 217 NLSMLSMRDNKIRELPPE--LGELKNLVTLDLAHNHL-----EELPKEIGNCTMLVTLDL 269
++ L ++ ++ + L L+ + L L +++ + L L+L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 270 QHNEL-----VNIPDMLG-NLINLTRLRLSYN 295
+ NEL + L + +L L
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
Score = 42.7 bits (98), Expect = 1e-04
Identities = 20/134 (14%), Positives = 35/134 (26%), Gaps = 25/134 (18%)
Query: 240 NLVTLDLAHNHL--EELPKEIGNCTMLVTLDLQHNEL-----VNIPDMLGNLINLTRLRL 292
++ +LD+ L + + + L L +I L L L L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 293 SYNRLESVPETLSKCVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGP 352
N L V + + GL + I ++L T G
Sbjct: 63 RSNELGDV------------------GVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVL 104
Query: 353 TQFTSVYSINFEHN 366
+ E +
Sbjct: 105 SSTLRTLPTLQELH 118
Score = 42.3 bits (97), Expect = 1e-04
Identities = 14/109 (12%), Positives = 37/109 (33%), Gaps = 26/109 (23%)
Query: 172 LRVLDLRHNKLNELPM--VVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIR 229
++ LD++ +L++ ++ L +++ L + + + +
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGL------------------TEARCK 45
Query: 230 ELPPELGELKNLVTLDLAHNHL-EELPKEIG-----NCTMLVTLDLQHN 272
++ L L L+L N L + + + L LQ+
Sbjct: 46 DISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
Score = 39.2 bits (89), Expect = 0.001
Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 16/92 (17%)
Query: 147 TNLTCLGLAENSLT-----SLPDSLANLQQLRVLDLRHNKLNE------LPMVVYKLTSL 195
+ L L LA+ ++ SL +L LR LDL +N L + + V L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 196 KILYLRFNRIKTVHPDI-----QYLSNLSMLS 222
+ L L D + +L ++S
Sbjct: 429 EQLVLYDIYWSEEMEDRLQALEKDKPSLRVIS 460
Score = 37.6 bits (85), Expect = 0.004
Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 12/92 (13%)
Query: 473 ELQRLILQSNQL--VSLPRAIGHLTNLSYLSVGENNL-----QSIPEEIGTLENLHTLYL 525
++Q L +Q +L + L + + + L + I + L L L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 526 NDNTCLNNIPFELA-----LCSNLQIMSLDNC 552
N + + +Q +SL NC
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
Score = 36.9 bits (83), Expect = 0.006
Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 12/81 (14%)
Query: 216 SNLSMLSMRDNKI-----RELPPELGELKNLVTLDLAHNHL-EELPKEIG-----NCTML 264
S L +L + D + L L +L LDL++N L + ++ +L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 265 VTLDLQHNEL-VNIPDMLGNL 284
L L + D L L
Sbjct: 429 EQLVLYDIYWSEEMEDRLQAL 449
Score = 36.9 bits (83), Expect = 0.006
Identities = 21/97 (21%), Positives = 30/97 (30%), Gaps = 16/97 (16%)
Query: 402 WVGLTELNLGTNQIS-----KLSEDIQNLVNLEVLVLSNNLL-----KKLPSSI-GNLRK 450
L L L +S L+ + +L L LSNN L +L S+
Sbjct: 368 GSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCL 427
Query: 451 LKCLDLEENKLESLPNEIGFLKELQRLILQSNQLVSL 487
L+ L L + LQ L L +
Sbjct: 428 LEQLVLYDIYWSE-----EMEDRLQALEKDKPSLRVI 459
Score = 36.5 bits (82), Expect = 0.009
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Query: 381 NLSKVNMKDNLLTSLPLDLGTWVGLTELNLGTNQIS-----KLSEDI-QNLVNLEVLVLS 434
L+ ++ D+ +SL L L EL+L N + +L E + Q LE LVL
Sbjct: 375 WLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLY 434
Query: 435 NNLL-KKLPSSIGNLRKLK 452
+ +++ + L K K
Sbjct: 435 DIYWSEEMEDRLQALEKDK 453
Score = 35.7 bits (80), Expect = 0.015
Identities = 10/91 (10%), Positives = 31/91 (34%), Gaps = 8/91 (8%)
Query: 381 NLSKVNMKDNLLTSLPLD--LGTWVGLTELNLGTNQIS-----KLSEDIQNLVNLEVLVL 433
++ ++++ L+ L + L ++ +S ++ L L L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 434 SNNLLK-KLPSSIGNLRKLKCLDLEENKLES 463
+N L + + +++ L++
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQN 93
Score = 35.3 bits (79), Expect = 0.019
Identities = 12/91 (13%), Positives = 26/91 (28%), Gaps = 23/91 (25%)
Query: 260 NCTMLVTLDLQHNEL-----VNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFN 314
++L L L ++ ++ L +L L LS N L
Sbjct: 367 PGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA-------------- 412
Query: 315 VEGCALSSLPDGLLSSLTSINNITLSRNKFT 345
+ L + + + + L ++
Sbjct: 413 ----GILQLVESVRQPGCLLEQLVLYDIYWS 439
Score = 35.3 bits (79), Expect = 0.022
Identities = 9/68 (13%), Positives = 21/68 (30%), Gaps = 8/68 (11%)
Query: 285 INLTRLRLSYNRL--ESVPETLSKCVHLNEFNVEGCALS-----SLPDGLLSSLTSINNI 337
+++ L + L E L ++ C L+ + L ++ +
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISS-ALRVNPALAEL 60
Query: 338 TLSRNKFT 345
L N+
Sbjct: 61 NLRSNELG 68
Score = 34.2 bits (76), Expect = 0.044
Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 12/84 (14%)
Query: 168 NLQQLRVLDLRHNKLNE-----LPMVVYKLTSLKILYLRFNRIKTVHPDI------QYLS 216
LRVL L +++ L + SL+ L L N + Q
Sbjct: 367 PGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGC 426
Query: 217 NLSMLSMRDNKI-RELPPELGELK 239
L L + D E+ L L+
Sbjct: 427 LLEQLVLYDIYWSEEMEDRLQALE 450
Score = 33.8 bits (75), Expect = 0.064
Identities = 18/108 (16%), Positives = 33/108 (30%), Gaps = 29/108 (26%)
Query: 102 NILNLDLSKSSIT-----HLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAE 156
+ L L+ ++ L ++ L EL L N L +
Sbjct: 370 VLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNC------------------LGD 411
Query: 157 NSLTSLPDSLA-NLQQLRVLDLRHNKLNE-----LPMVVYKLTSLKIL 198
+ L +S+ L L L +E L + SL+++
Sbjct: 412 AGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVI 459
Score = 32.6 bits (72), Expect = 0.13
Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Query: 496 NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELA-----LCSNLQIMSLD 550
L+ V +++ S+ + +L L L++N + +L L+ + L
Sbjct: 375 WLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLY 434
Query: 551 NCPLSQI 557
+ S+
Sbjct: 435 DIYWSEE 441
Score = 32.3 bits (71), Expect = 0.17
Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 11/73 (15%)
Query: 423 QNLVNLEVLVLSNNLL-----KKLPSSIGNLRKLKCLDLEENKL--ESLPNEIGFLKE-- 473
Q L VL L++ + L +++ L+ LDL N L + + +++
Sbjct: 366 QPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPG 425
Query: 474 --LQRLILQSNQL 484
L++L+L
Sbjct: 426 CLLEQLVLYDIYW 438
Score = 32.3 bits (71), Expect = 0.19
Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 15/90 (16%)
Query: 474 LQRLILQSNQL-----VSLPRAIGHLTNLSYLSVGENNL--QSIPEEIGTLEN----LHT 522
L+ L L + SL + +L L + N L I + + ++ L
Sbjct: 371 LRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQ 430
Query: 523 LYLNDNTCLNNIPFELA----LCSNLQIMS 548
L L D + L +L+++S
Sbjct: 431 LVLYDIYWSEEMEDRLQALEKDKPSLRVIS 460
Score = 31.1 bits (68), Expect = 0.39
Identities = 8/40 (20%), Positives = 19/40 (47%)
Query: 97 RCKEENILNLDLSKSSITHLPPSVEKLTHLEELYLYGNKL 136
+C+ + + L+++ + ++ L EL L N+L
Sbjct: 28 QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNEL 67
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 42.8 bits (99), Expect = 6e-05
Identities = 31/248 (12%), Positives = 64/248 (25%), Gaps = 18/248 (7%)
Query: 106 LDLSKSSITHLPPSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLT--SLP 163
LDL+ ++ + + + ++ + + L+ + + +L
Sbjct: 5 LDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLH 64
Query: 164 DSLANLQQLRVLDLRHNKLN-ELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLS 222
L+ +L+ L L +L+ + + K ++L L L + LS+ S L
Sbjct: 65 GILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 124
Query: 223 MRDNKIRELPPELGELKNLVT-------------LDLAHNHLEELPKEIGNCTMLVTLDL 269
+ E + + + L
Sbjct: 125 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSD 184
Query: 270 QHNELVNIPDMLGNLINLTRLRLSYNRL--ESVPETLSKCVHLNEFNVEGCALSSLPDGL 327
+ L L L LS L + L V G L
Sbjct: 185 SVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLL 244
Query: 328 LSSLTSIN 335
+L +
Sbjct: 245 KEALPHLQ 252
Score = 42.0 bits (97), Expect = 1e-04
Identities = 16/128 (12%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 406 TELNLGTNQISKLSEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKL--ES 463
L+L + + + + + + + +++ +DL + + +
Sbjct: 3 QTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVST 62
Query: 464 LPNEIGFLKELQRLILQSNQLV-SLPRAIGHLTNLSYLSVGENNLQSIPEEIGTLENLHT 522
L + +LQ L L+ +L + + +NL L++ + S L +
Sbjct: 63 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSR 122
Query: 523 LYLNDNTC 530
L + +
Sbjct: 123 LDELNLSW 130
Score = 33.5 bits (75), Expect = 0.061
Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 5/97 (5%)
Query: 475 QRLILQSNQLVSLPRAIGHLT--NLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLN 532
Q L L L P G L + + + E + + + L+++
Sbjct: 3 QTLDLTGKNL--HPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEV 60
Query: 533 N-IPFELALCSNLQIMSLDNCPLSQIPSEIVVGGPSL 568
+ + L+ CS LQ +SL+ LS + +L
Sbjct: 61 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNL 97
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor
receptor, N-terminal domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 156
Score = 40.9 bits (94), Expect = 8e-05
Identities = 20/156 (12%), Positives = 40/156 (25%), Gaps = 23/156 (14%)
Query: 261 CTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESVPETLSKCVHLNEFNVEGCAL 320
L + ++ L NLT L + + L
Sbjct: 7 PHGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQH----------------------L 44
Query: 321 SSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHNQIDKIPYGIFSRAK 380
L L L + N+T+ ++ + +N N ++ + +
Sbjct: 45 QHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS 104
Query: 381 NLSKVNMKDNLLTSLPL-DLGTWVGLTELNLGTNQI 415
V + L S L L W + ++
Sbjct: 105 LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKL 140
Score = 37.1 bits (84), Expect = 0.002
Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 3/108 (2%)
Query: 147 TNLTCLGLAENSLTSLPDSLANLQQLRVLDLRHNK-LNELPMVVYK-LTSLKILYLRFNR 204
+ L + L + L L + + + L L + + L L+ L + +
Sbjct: 8 HGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSG 67
Query: 205 IKTV-HPDIQYLSNLSMLSMRDNKIRELPPELGELKNLVTLDLAHNHL 251
++ V + LS L++ N + L + + +L L L+ N L
Sbjct: 68 LRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPL 115
Score = 36.7 bits (83), Expect = 0.003
Identities = 26/140 (18%), Positives = 43/140 (30%), Gaps = 4/140 (2%)
Query: 118 PSVEKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAEN-SLTSLP-DSLANLQQLRVL 175
P L + + NLT L + L L L L +LR L
Sbjct: 2 PDACCPHGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNL 61
Query: 176 DL-RHNKLNELPMVVYKLTSLKILYLRFNRIKTVHPDIQYLSNLSMLSMRDNKIRELPPE 234
+ + P + L L L FN ++++ +L L + N +
Sbjct: 62 TIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLH-CSCA 120
Query: 235 LGELKNLVTLDLAHNHLEEL 254
L L+ L ++L
Sbjct: 121 LRWLQRWEEEGLGGVPEQKL 140
Score = 34.4 bits (77), Expect = 0.014
Identities = 9/60 (15%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Query: 495 TNLSYLSVGENNLQSIPEEIGTLENLHTLYLNDNTCLNNIPFELAL-CSNLQIMSLDNCP 553
S L + + ENL LY+ + L ++ L+ +++
Sbjct: 8 HGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSG 67
Score = 31.7 bits (70), Expect = 0.10
Identities = 13/90 (14%), Positives = 25/90 (27%), Gaps = 2/90 (2%)
Query: 474 LQRLILQSNQLVSLPRAIGHLTNLSYLSVGENN-LQSIPEEI-GTLENLHTLYLNDNTCL 531
L + + + NL+ L + LQ + L L L + +
Sbjct: 10 SSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR 69
Query: 532 NNIPFELALCSNLQIMSLDNCPLSQIPSEI 561
P L ++L L + +
Sbjct: 70 FVAPDAFHFTPRLSRLNLSFNALESLSWKT 99
Score = 29.4 bits (64), Expect = 0.62
Identities = 15/103 (14%), Positives = 38/103 (36%), Gaps = 2/103 (1%)
Query: 454 LDLEENKLESLPNEIGFLKELQRLILQSNQLVSL--PRAIGHLTNLSYLSVGENNLQSIP 511
L + + + + L L +++ Q + R + L L L++ ++ L+ +
Sbjct: 13 LRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVA 72
Query: 512 EEIGTLENLHTLYLNDNTCLNNIPFELALCSNLQIMSLDNCPL 554
+ + L ++ ++ +LQ + L PL
Sbjct: 73 PDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPL 115
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 192
Score = 36.3 bits (82), Expect = 0.005
Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 3/104 (2%)
Query: 159 LTSLPDSLANLQQLRVLDLRHNKLNELPMVVYK-LTSLKILYLRFNRIKTVHPDIQYLSN 217
L QL+ L+L N+++ + ++ L SL L L N +
Sbjct: 91 KEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEW 150
Query: 218 LSMLSMRDNKIRELPPELGELKNLVTLDLAHNHLEELPKEIGNC 261
L S+ R P +++++ DL H+ + + C
Sbjct: 151 LRKKSLNGGAARCGAPS--KVRDVQIKDLPHSEFKCSSENSEGC 192
Score = 34.4 bits (77), Expect = 0.019
Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 4/174 (2%)
Query: 360 SINFEHNQIDKIPYGIFSRAKNLS-KVNMKDNLLTSLPLDLGTWVGLTELNLGTNQISKL 418
+++ + +IP I L N + + + EL +
Sbjct: 12 TVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEP 71
Query: 419 SEDIQNLVNLEVLVLSNNLLKKLPSSIGNLRKLKCLDLEENKLESLPNEI-GFLKELQRL 477
+ E+ + N + + L +LK L+L +N++ + L L L
Sbjct: 72 NAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSL 131
Query: 478 ILQSNQLVSLPRAIGHLTNLSYLSVGENNLQ-SIPEEIGTLENLHTLYLNDNTC 530
L SN L S+ + P ++ + + L ++ C
Sbjct: 132 NLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRDV-QIKDLPHSEFKC 184
Score = 30.5 bits (67), Expect = 0.34
Identities = 24/181 (13%), Positives = 51/181 (28%), Gaps = 15/181 (8%)
Query: 194 SLKILYLRFNRIKTVHPDIQ------YLSNLSMLSMRDNKIRELPPELGELKNLVTLDLA 247
+ +K + DI L++ + + + + P L +L+
Sbjct: 9 EGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTG 68
Query: 248 HNHLEELPKEIGNCTMLVTLDLQHNELVNIPDMLGNLINLTRLRLSYNRLESV-PETLSK 306
G + ++ M L L L L N++ V P +
Sbjct: 69 IEP----NAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEH 124
Query: 307 CVHLNEFNVEGCALSSLPDGLLSSLTSINNITLSRNKFTAYPSGGPTQFTSVYSINFEHN 366
L N+ + L + +L+ G P++ V + H+
Sbjct: 125 LNSLTSLNLASNPFNCNCH-LAWFAEWLRKKSLNGGAAR---CGAPSKVRDVQIKDLPHS 180
Query: 367 Q 367
+
Sbjct: 181 E 181
Score = 28.6 bits (62), Expect = 1.6
Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 3/80 (3%)
Query: 105 NLDLSKSSITHLPPSV-EKLTHLEELYLYGNKLASLPSQIGYVTNLTCLGLAENSLTSLP 163
L+L + I+ + P E L L L L N + L L +
Sbjct: 106 TLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARC-- 163
Query: 164 DSLANLQQLRVLDLRHNKLN 183
+ + ++ +++ DL H++
Sbjct: 164 GAPSKVRDVQIKDLPHSEFK 183
>d1gyoa_ a.138.1.1 (A:) Cytochrome c3 {Desulfovibrio gigas,
di-tetraheme cytochrome c3 [TaxId: 879]}
Length = 106
Score = 27.4 bits (60), Expect = 1.8
Identities = 7/27 (25%), Positives = 11/27 (40%), Gaps = 3/27 (11%)
Query: 59 VDVKKTVTVKHPESNKPKPTTKKKEPI 85
+DV V + PE P P + +
Sbjct: 1 LDVPCKVVITAPEGEDPHP---RFGKV 24
>d1pgsa2 b.121.1.1 (A:141-314) Peptide:N-glycosidase F, PNGase F
{Flavobacterium meningosepticum [TaxId: 238]}
Length = 174
Score = 26.0 bits (57), Expect = 9.9
Identities = 7/30 (23%), Positives = 12/30 (40%)
Query: 361 INFEHNQIDKIPYGIFSRAKNLSKVNMKDN 390
I + + ID +PYG + + N
Sbjct: 9 IQYNKSSIDGVPYGKAHTLGLKKNIQLPTN 38
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.133 0.371
Gapped
Lambda K H
0.267 0.0428 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,997,882
Number of extensions: 92095
Number of successful extensions: 808
Number of sequences better than 10.0: 1
Number of HSP's gapped: 350
Number of HSP's successfully gapped: 218
Length of query: 582
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 492
Effective length of database: 1,171,896
Effective search space: 576572832
Effective search space used: 576572832
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.7 bits)