BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10958
(321 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1F05|A Chain A, Crystal Structure Of Human Transaldolase
pdb|1F05|B Chain B, Crystal Structure Of Human Transaldolase
Length = 337
Score = 298 bits (764), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/236 (62%), Positives = 173/236 (73%), Gaps = 17/236 (7%)
Query: 1 MDKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKL 60
+DKL +LFG EIL IPGRVSTEVDARLSFDKDA +A+A++ I++Y+EAGI K+RILIKL
Sbjct: 84 IDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVARARRLIELYKEAGISKDRILIKL 143
Query: 61 ASTWEGIQAAKVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISP--------------- 105
+STWEGIQA K LE ++GIHCN+TLLF GVTLISP
Sbjct: 144 SSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTLISPFVGRILDWHVANTDK 203
Query: 106 --YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEEL 163
Y P EDPGV SVTKIYNYYKKF YKT+VMGASFRNTGEI ALAGCD +TI PKLL EL
Sbjct: 204 KSYEPLEDPGVKSVTKIYNYYKKFSYKTIVMGASFRNTGEIKALAGCDFLTISPKLLGEL 263
Query: 164 ENSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDS 219
+ +LS K+A+ ++L+KI LDE +FRW NED MA EKLSDGIRKFA D+
Sbjct: 264 LQDNAKLVPVLSAKAAQASDLEKIHLDEKSFRWLHNEDQMAVEKLSDGIRKFAADA 319
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 289 EQTEAAMDKLVILFGTEILNIIPGRVSTEVDAR 321
+Q + A+DKL +LFG EIL IPGRVSTEVDAR
Sbjct: 78 DQIKNAIDKLFVLFGAEILKKIPGRVSTEVDAR 110
>pdb|2CWN|A Chain A, Crystal Structure Of Mouse Transaldolase
pdb|2CWN|B Chain B, Crystal Structure Of Mouse Transaldolase
Length = 332
Score = 295 bits (755), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/236 (62%), Positives = 172/236 (72%), Gaps = 17/236 (7%)
Query: 1 MDKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKL 60
+DKL +LFG EIL IPGRVSTEVDARLSFDKDA +A+A++ I++Y+EAG+ K+RILIKL
Sbjct: 79 IDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVARARRLIELYKEAGVGKDRILIKL 138
Query: 61 ASTWEGIQAAKVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISP--------------- 105
+STWEGIQA K LE ++GIHCN+TLLF GVTLISP
Sbjct: 139 SSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTLISPFVGRILDWHVANTDK 198
Query: 106 --YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEEL 163
Y P DPGV SVTKIYNYYKKFGYKT+VMGASFRNTGEI ALAGCD +TI PKLL EL
Sbjct: 199 KSYEPQGDPGVKSVTKIYNYYKKFGYKTIVMGASFRNTGEIKALAGCDFLTISPKLLGEL 258
Query: 164 ENSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDS 219
+ + LS K+A+ ++ +KI LDE AFRW NED MA EKLSDGIRKFA D+
Sbjct: 259 LKDNSKLAPALSVKAAQTSDSEKIHLDEKAFRWLHNEDQMAVEKLSDGIRKFAADA 314
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 27/33 (81%)
Query: 289 EQTEAAMDKLVILFGTEILNIIPGRVSTEVDAR 321
EQ + A+DKL +LFG EIL IPGRVSTEVDAR
Sbjct: 73 EQIKNAIDKLFVLFGAEILKKIPGRVSTEVDAR 105
>pdb|2E1D|A Chain A, Crystal Structure Of Mouse Transaldolase
pdb|2E1D|B Chain B, Crystal Structure Of Mouse Transaldolase
Length = 331
Score = 295 bits (755), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/236 (62%), Positives = 172/236 (72%), Gaps = 17/236 (7%)
Query: 1 MDKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKL 60
+DKL +LFG EIL IPGRVSTEVDARLSFDKDA +A+A++ I++Y+EAG+ K+RILIKL
Sbjct: 81 IDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVARARRLIELYKEAGVGKDRILIKL 140
Query: 61 ASTWEGIQAAKVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISP--------------- 105
+STWEGIQA K LE ++GIHCN+TLLF GVTLISP
Sbjct: 141 SSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTLISPFVGRILDWHVANTDK 200
Query: 106 --YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEEL 163
Y P DPGV SVTKIYNYYKKFGYKT+VMGASFRNTGEI ALAGCD +TI PKLL EL
Sbjct: 201 KSYEPQGDPGVKSVTKIYNYYKKFGYKTIVMGASFRNTGEIKALAGCDFLTISPKLLGEL 260
Query: 164 ENSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDS 219
+ + LS K+A+ ++ +KI LDE AFRW NED MA EKLSDGIRKFA D+
Sbjct: 261 LKDNSKLAPALSVKAAQTSDSEKIHLDEKAFRWLHNEDQMAVEKLSDGIRKFAADA 316
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 27/33 (81%)
Query: 289 EQTEAAMDKLVILFGTEILNIIPGRVSTEVDAR 321
EQ + A+DKL +LFG EIL IPGRVSTEVDAR
Sbjct: 75 EQIKNAIDKLFVLFGAEILKKIPGRVSTEVDAR 107
>pdb|1I2P|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant D17a
pdb|1I2P|B Chain B, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant D17a
Length = 316
Score = 260 bits (664), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 138/242 (57%), Positives = 168/242 (69%), Gaps = 22/242 (9%)
Query: 2 DKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLA 61
DKL + G EIL ++PGR+STEVDARLS+D +ASIAKAK+ IK+Y +AGI +RILIKLA
Sbjct: 74 DKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKLYNDAGISNDRILIKLA 133
Query: 62 STWEGIQAAKVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISP---------------- 105
STW+GI+AA+ LE E GI+CNLTLLF GV LISP
Sbjct: 134 STWQGIRAAEQLEKE-GINCNLTLLFSFAQARACAEAGVFLISPFVGRILDWYKANTDKK 192
Query: 106 -YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELE 164
YAP EDPGVVSV++IY YYK+ GY+TVVMGASFRN GEIL LAGCD +TI P LL+EL
Sbjct: 193 EYAPAEDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEILELAGCDRLTIAPALLKELA 252
Query: 165 NSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEKL 224
S +++ LS KA +IT ES F W+ N+DPMA +KL++GIRKFA+D EKL
Sbjct: 253 ESEGAIERKLSYTGEVKARPARIT--ESEFLWQHNQDPMAVDKLAEGIRKFAID--QEKL 308
Query: 225 TK 226
K
Sbjct: 309 EK 310
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 288 AEQTEAAMDKLVILFGTEILNIIPGRVSTEVDAR 321
A+Q A DKL + G EIL ++PGR+STEVDAR
Sbjct: 66 AQQIVDATDKLAVNIGLEILKLVPGRISTEVDAR 99
>pdb|1I2N|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant N35a
pdb|1I2N|B Chain B, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant N35a
Length = 316
Score = 260 bits (664), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 138/242 (57%), Positives = 168/242 (69%), Gaps = 22/242 (9%)
Query: 2 DKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLA 61
DKL + G EIL ++PGR+STEVDARLS+D +ASIAKAK+ IK+Y +AGI +RILIKLA
Sbjct: 74 DKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKLYNDAGISNDRILIKLA 133
Query: 62 STWEGIQAAKVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISP---------------- 105
STW+GI+AA+ LE E GI+CNLTLLF GV LISP
Sbjct: 134 STWQGIRAAEQLEKE-GINCNLTLLFSFAQARACAEAGVFLISPFVGRILDWYKANTDKK 192
Query: 106 -YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELE 164
YAP EDPGVVSV++IY YYK+ GY+TVVMGASFRN GEIL LAGCD +TI P LL+EL
Sbjct: 193 EYAPAEDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEILELAGCDRLTIAPALLKELA 252
Query: 165 NSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEKL 224
S +++ LS KA +IT ES F W+ N+DPMA +KL++GIRKFA+D EKL
Sbjct: 253 ESEGAIERKLSYTGEVKARPARIT--ESEFLWQHNQDPMAVDKLAEGIRKFAID--QEKL 308
Query: 225 TK 226
K
Sbjct: 309 EK 310
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 288 AEQTEAAMDKLVILFGTEILNIIPGRVSTEVDAR 321
A+Q A DKL + G EIL ++PGR+STEVDAR
Sbjct: 66 AQQIVDATDKLAVNIGLEILKLVPGRISTEVDAR 99
>pdb|1ONR|A Chain A, Structure Of Transaldolase B
pdb|1ONR|B Chain B, Structure Of Transaldolase B
Length = 316
Score = 259 bits (663), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/242 (57%), Positives = 168/242 (69%), Gaps = 22/242 (9%)
Query: 2 DKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLA 61
DKL + G EIL ++PGR+STEVDARLS+D +ASIAKAK+ IK+Y +AGI +RILIKLA
Sbjct: 74 DKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKLYNDAGISNDRILIKLA 133
Query: 62 STWEGIQAAKVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISP---------------- 105
STW+GI+AA+ LE E GI+CNLTLLF GV LISP
Sbjct: 134 STWQGIRAAEQLEKE-GINCNLTLLFSFAQARACAEAGVFLISPFVGRILDWYKANTDKK 192
Query: 106 -YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELE 164
YAP EDPGVVSV++IY YYK+ GY+TVVMGASFRN GEIL LAGCD +TI P LL+EL
Sbjct: 193 EYAPAEDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEILELAGCDRLTIAPALLKELA 252
Query: 165 NSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEKL 224
S +++ LS KA +IT ES F W+ N+DPMA +KL++GIRKFA+D EKL
Sbjct: 253 ESEGAIERKLSYTGEVKARPARIT--ESEFLWQHNQDPMAVDKLAEGIRKFAID--QEKL 308
Query: 225 TK 226
K
Sbjct: 309 EK 310
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 288 AEQTEAAMDKLVILFGTEILNIIPGRVSTEVDAR 321
A+Q A DKL + G EIL ++PGR+STEVDAR
Sbjct: 66 AQQIVDATDKLAVNIGLEILKLVPGRISTEVDAR 99
>pdb|3CWN|A Chain A, Escherichia Coli Transaldolase B Mutant F178y
pdb|3CWN|B Chain B, Escherichia Coli Transaldolase B Mutant F178y
Length = 337
Score = 259 bits (662), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/242 (57%), Positives = 168/242 (69%), Gaps = 22/242 (9%)
Query: 2 DKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLA 61
DKL + G EIL ++PGR+STEVDARLS+D +ASIAKAK+ IK+Y +AGI +RILIKLA
Sbjct: 95 DKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKLYNDAGISNDRILIKLA 154
Query: 62 STWEGIQAAKVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISP---------------- 105
STW+GI+AA+ LE E GI+CNLTLLF GV LISP
Sbjct: 155 STWQGIRAAEQLEKE-GINCNLTLLFSFAQARACAEAGVFLISPYVGRILDWYKANTDKK 213
Query: 106 -YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELE 164
YAP EDPGVVSV++IY YYK+ GY+TVVMGASFRN GEIL LAGCD +TI P LL+EL
Sbjct: 214 EYAPAEDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEILELAGCDRLTIAPTLLKELA 273
Query: 165 NSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEKL 224
S +++ LS KA +IT ES F W+ N+DPMA +KL++GIRKFA+D EKL
Sbjct: 274 ESEGAIERKLSYTGEVKARPARIT--ESEFLWQHNQDPMAVDKLAEGIRKFAID--QEKL 329
Query: 225 TK 226
K
Sbjct: 330 EK 331
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 288 AEQTEAAMDKLVILFGTEILNIIPGRVSTEVDAR 321
A+Q A DKL + G EIL ++PGR+STEVDAR
Sbjct: 87 AQQIVDATDKLAVNIGLEILKLVPGRISTEVDAR 120
>pdb|3KOF|A Chain A, Crystal Structure Of The Double Mutant F178yR181E OF
E.COLI Transaldolase B
pdb|3KOF|B Chain B, Crystal Structure Of The Double Mutant F178yR181E OF
E.COLI Transaldolase B
Length = 337
Score = 259 bits (662), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/242 (57%), Positives = 168/242 (69%), Gaps = 22/242 (9%)
Query: 2 DKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLA 61
DKL + G EIL ++PGR+STEVDARLS+D +ASIAKAK+ IK+Y +AGI +RILIKLA
Sbjct: 95 DKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKLYNDAGISNDRILIKLA 154
Query: 62 STWEGIQAAKVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISP---------------- 105
STW+GI+AA+ LE E GI+CNLTLLF GV LISP
Sbjct: 155 STWQGIRAAEQLEKE-GINCNLTLLFSFAQARACAEAGVFLISPYVGEILDWYKANTDKK 213
Query: 106 -YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELE 164
YAP EDPGVVSV++IY YYK+ GY+TVVMGASFRN GEIL LAGCD +TI P LL+EL
Sbjct: 214 EYAPAEDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEILELAGCDRLTIAPTLLKELA 273
Query: 165 NSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEKL 224
S +++ LS KA +IT ES F W+ N+DPMA +KL++GIRKFA+D EKL
Sbjct: 274 ESEGAIERKLSYTGEVKARPARIT--ESEFLWQHNQDPMAVDKLAEGIRKFAID--QEKL 329
Query: 225 TK 226
K
Sbjct: 330 EK 331
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 288 AEQTEAAMDKLVILFGTEILNIIPGRVSTEVDAR 321
A+Q A DKL + G EIL ++PGR+STEVDAR
Sbjct: 87 AQQIVDATDKLAVNIGLEILKLVPGRISTEVDAR 120
>pdb|3M16|A Chain A, Structure Of A Transaldolase From Oleispira Antarctica
Length = 329
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/234 (55%), Positives = 163/234 (69%), Gaps = 20/234 (8%)
Query: 2 DKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLA 61
DKL + G E+L IPG +STEVDARLSFD A++AKA+K I++Y++AGID +RILIK+A
Sbjct: 83 DKLAVNIGCEVLTSIPGVISTEVDARLSFDTQATVAKARKLIRLYQDAGIDSDRILIKIA 142
Query: 62 STWEGIQAAKVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISP---------------- 105
STWEGIQAAK+LE+E GIHCNLTLLF G TLISP
Sbjct: 143 STWEGIQAAKILEAE-GIHCNLTLLFHFAQAQACAEAGTTLISPFVGRILDWYKANSGQS 201
Query: 106 -YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELE 164
Y+ +EDPGVVSVT+IYN+YK G+KT+V GASFRNTGEI LAGCD +TI P+LL +LE
Sbjct: 202 EYSASEDPGVVSVTEIYNFYKSHGFKTIVXGASFRNTGEIEELAGCDRLTISPELLAQLE 261
Query: 165 NSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVD 218
T+P++Q L K + +T E++FRW N DP A +KL+DGIR+FA D
Sbjct: 262 ADTSPLEQKLFPIKETKDTPELLT--EASFRWAXNNDPXAHDKLADGIRRFAAD 313
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 19/26 (73%)
Query: 296 DKLVILFGTEILNIIPGRVSTEVDAR 321
DKL + G E+L IPG +STEVDAR
Sbjct: 83 DKLAVNIGCEVLTSIPGVISTEVDAR 108
>pdb|1I2R|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant S176a
pdb|1I2R|B Chain B, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant S176a
Length = 316
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/242 (56%), Positives = 168/242 (69%), Gaps = 22/242 (9%)
Query: 2 DKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLA 61
DKL + G EIL ++PGR+STEVDARLS+D +ASIAKAK+ IK+Y +AGI +RILIKLA
Sbjct: 74 DKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKLYNDAGISNDRILIKLA 133
Query: 62 STWEGIQAAKVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISP---------------- 105
STW+GI+AA+ LE E GI+CNLTLLF GV LI+P
Sbjct: 134 STWQGIRAAEQLEKE-GINCNLTLLFSFAQARACAEAGVFLIAPFVGRILDWYKANTDKK 192
Query: 106 -YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELE 164
YAP EDPGVVSV++IY YYK+ GY+TVVMGASFRN GEIL LAGCD +TI P LL+EL
Sbjct: 193 EYAPAEDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEILELAGCDRLTIAPALLKELA 252
Query: 165 NSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEKL 224
S +++ LS KA +IT ES F W+ N+DPMA +KL++GIRKFA+D EKL
Sbjct: 253 ESEGAIERKLSYTGEVKARPARIT--ESEFLWQHNQDPMAVDKLAEGIRKFAID--QEKL 308
Query: 225 TK 226
K
Sbjct: 309 EK 310
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 288 AEQTEAAMDKLVILFGTEILNIIPGRVSTEVDAR 321
A+Q A DKL + G EIL ++PGR+STEVDAR
Sbjct: 66 AQQIVDATDKLAVNIGLEILKLVPGRISTEVDAR 99
>pdb|1I2Q|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant T156a
pdb|1I2Q|B Chain B, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant T156a
Length = 316
Score = 258 bits (659), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 137/242 (56%), Positives = 167/242 (69%), Gaps = 22/242 (9%)
Query: 2 DKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLA 61
DKL + G EIL ++PGR+STEVDARLS+D +ASIAKAK+ IK+Y +AGI +RILIKLA
Sbjct: 74 DKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKLYNDAGISNDRILIKLA 133
Query: 62 STWEGIQAAKVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISP---------------- 105
STW+GI+AA+ LE E GI+CNL LLF GV LISP
Sbjct: 134 STWQGIRAAEQLEKE-GINCNLALLFSFAQARACAEAGVFLISPFVGRILDWYKANTDKK 192
Query: 106 -YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELE 164
YAP EDPGVVSV++IY YYK+ GY+TVVMGASFRN GEIL LAGCD +TI P LL+EL
Sbjct: 193 EYAPAEDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEILELAGCDRLTIAPALLKELA 252
Query: 165 NSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEKL 224
S +++ LS KA +IT ES F W+ N+DPMA +KL++GIRKFA+D EKL
Sbjct: 253 ESEGAIERKLSYTGEVKARPARIT--ESEFLWQHNQDPMAVDKLAEGIRKFAID--QEKL 308
Query: 225 TK 226
K
Sbjct: 309 EK 310
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 288 AEQTEAAMDKLVILFGTEILNIIPGRVSTEVDAR 321
A+Q A DKL + G EIL ++PGR+STEVDAR
Sbjct: 66 AQQIVDATDKLAVNIGLEILKLVPGRISTEVDAR 99
>pdb|1UCW|A Chain A, Complex Of Transaldolase With The Reduced Schiff-Base
Intermediate
pdb|1UCW|B Chain B, Complex Of Transaldolase With The Reduced Schiff-Base
Intermediate
Length = 317
Score = 258 bits (658), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 137/242 (56%), Positives = 167/242 (69%), Gaps = 22/242 (9%)
Query: 2 DKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLA 61
DKL + G EIL ++PGR+STEVDARLS+D +ASIAKAK+ IK+Y +AGI +RILI LA
Sbjct: 75 DKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKLYNDAGISNDRILIXLA 134
Query: 62 STWEGIQAAKVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISP---------------- 105
STW+GI+AA+ LE E GI+CNLTLLF GV LISP
Sbjct: 135 STWQGIRAAEQLEKE-GINCNLTLLFSFAQARACAEAGVFLISPFVGRILDWYKANTDKK 193
Query: 106 -YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELE 164
YAP EDPGVVSV++IY YYK+ GY+TVVMGASFRN GEIL LAGCD +TI P LL+EL
Sbjct: 194 EYAPAEDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEILELAGCDRLTIAPALLKELA 253
Query: 165 NSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEKL 224
S +++ LS KA +IT ES F W+ N+DPMA +KL++GIRKFA+D EKL
Sbjct: 254 ESEGAIERKLSYTGEVKARPARIT--ESEFLWQHNQDPMAVDKLAEGIRKFAID--QEKL 309
Query: 225 TK 226
K
Sbjct: 310 EK 311
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 288 AEQTEAAMDKLVILFGTEILNIIPGRVSTEVDAR 321
A+Q A DKL + G EIL ++PGR+STEVDAR
Sbjct: 67 AQQIVDATDKLAVNIGLEILKLVPGRISTEVDAR 100
>pdb|3CQ0|A Chain A, Crystal Structure Of Tal2_yeast
pdb|3CQ0|B Chain B, Crystal Structure Of Tal2_yeast
Length = 339
Score = 258 bits (658), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/236 (55%), Positives = 165/236 (69%), Gaps = 18/236 (7%)
Query: 1 MDKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKL 60
MDK+++ FGT+IL ++PGRVSTEVDARLSFDK A++ KA IK+Y++AG+ KER+LIK+
Sbjct: 86 MDKILVEFGTQILKVVPGRVSTEVDARLSFDKKATVKKALHIIKLYKDAGVPKERVLIKI 145
Query: 61 ASTWEGIQAAKVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISP--------------- 105
ASTWEGIQAA+ LE ++GIHCN+TLLF VTLISP
Sbjct: 146 ASTWEGIQAARELEVKHGIHCNMTLLFSFTQAVACAEANVTLISPFVGRIMDFYKALSGK 205
Query: 106 -YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELE 164
Y DPGV+SV KIY+YYK+ GY T VM ASFRN E+ ALAG D MT+ LLE+L
Sbjct: 206 DYTAETDPGVLSVKKIYSYYKRHGYATEVMAASFRNLDELKALAGIDNMTLPLNLLEQLY 265
Query: 165 NSTTPVDQMLSEKSAKKANLDKITL--DESAFRWELNEDPMATEKLSDGIRKFAVD 218
ST P++ L+ +SAK+ ++K++ DE FR+ LNED MATEKLSDGIRKF+ D
Sbjct: 266 ESTDPIENKLNSESAKEEGVEKVSFINDEPHFRYVLNEDQMATEKLSDGIRKFSAD 321
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 29/33 (87%)
Query: 289 EQTEAAMDKLVILFGTEILNIIPGRVSTEVDAR 321
E+ E AMDK+++ FGT+IL ++PGRVSTEVDAR
Sbjct: 80 EKIENAMDKILVEFGTQILKVVPGRVSTEVDAR 112
>pdb|1I2O|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant E96a
pdb|1I2O|B Chain B, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant E96a
Length = 316
Score = 257 bits (657), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 137/242 (56%), Positives = 167/242 (69%), Gaps = 22/242 (9%)
Query: 2 DKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLA 61
DKL + G EIL ++PGR+ST VDARLS+D +ASIAKAK+ IK+Y +AGI +RILIKLA
Sbjct: 74 DKLAVNIGLEILKLVPGRISTAVDARLSYDTEASIAKAKRLIKLYNDAGISNDRILIKLA 133
Query: 62 STWEGIQAAKVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISP---------------- 105
STW+GI+AA+ LE E GI+CNLTLLF GV LISP
Sbjct: 134 STWQGIRAAEQLEKE-GINCNLTLLFSFAQARACAEAGVFLISPFVGRILDWYKANTDKK 192
Query: 106 -YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELE 164
YAP EDPGVVSV++IY YYK+ GY+TVVMGASFRN GEIL LAGCD +TI P LL+EL
Sbjct: 193 EYAPAEDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEILELAGCDRLTIAPALLKELA 252
Query: 165 NSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEKL 224
S +++ LS KA +IT ES F W+ N+DPMA +KL++GIRKFA+D EKL
Sbjct: 253 ESEGAIERKLSYTGEVKARPARIT--ESEFLWQHNQDPMAVDKLAEGIRKFAID--QEKL 308
Query: 225 TK 226
K
Sbjct: 309 EK 310
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 288 AEQTEAAMDKLVILFGTEILNIIPGRVSTEVDAR 321
A+Q A DKL + G EIL ++PGR+ST VDAR
Sbjct: 66 AQQIVDATDKLAVNIGLEILKLVPGRISTAVDAR 99
>pdb|3HJZ|A Chain A, The Structure Of An Aldolase From Prochlorococcus Marinus
Length = 334
Score = 211 bits (538), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 149/233 (63%), Gaps = 19/233 (8%)
Query: 1 MDKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKL 60
+D++ + FG EIL II GRVSTEVDARLSFD +A++ KA+K I +Y+ GI+KERILIK+
Sbjct: 78 VDQVSVFFGKEILKIISGRVSTEVDARLSFDTEATVKKARKLINLYKNFGIEKERILIKI 137
Query: 61 ASTWEGIQAAKVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISPYA------------- 107
A+TWEGI+AA++LE E GI CNLTLLF +TLISP+
Sbjct: 138 AATWEGIKAAEILEKE-GIKCNLTLLFNFCQAVTCANANITLISPFVGRILDWHKAKTGK 196
Query: 108 ----PTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEEL 163
EDPGV+SVT+IY Y+K+ G+KT V GASFRN EI LAGCDL+TI PK LEEL
Sbjct: 197 TSFIGAEDPGVISVTQIYKYFKEKGFKTEVXGASFRNLDEIKELAGCDLLTIAPKFLEEL 256
Query: 164 ENSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFA 216
+ + + L + S K N +E FR ED A+EKLS+GI F+
Sbjct: 257 KREKGVLIRKL-DASTKINNSIDYKFEEKDFRLSXLEDQXASEKLSEGITGFS 308
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 22/27 (81%)
Query: 295 MDKLVILFGTEILNIIPGRVSTEVDAR 321
+D++ + FG EIL II GRVSTEVDAR
Sbjct: 78 VDQVSVFFGKEILKIISGRVSTEVDAR 104
>pdb|3TK7|A Chain A, 2.0 Angstrom Resolution Crystal Structure Of Transaldolase
B (Tala) From Francisella Tularensis In Covalent Complex
With Fructose 6- Phosphate
pdb|3TK7|B Chain B, 2.0 Angstrom Resolution Crystal Structure Of Transaldolase
B (Tala) From Francisella Tularensis In Covalent Complex
With Fructose 6- Phosphate
pdb|3TNO|A Chain A, 1.65 Angstrom Resolution Crystal Structure Of
Transaldolase B (Tala) From Francisella Tularensis In
Covalent Complex With Sedoheptulose-7- Phosphate
pdb|3TNO|B Chain B, 1.65 Angstrom Resolution Crystal Structure Of
Transaldolase B (Tala) From Francisella Tularensis In
Covalent Complex With Sedoheptulose-7- Phosphate
pdb|3UPB|A Chain A, 1.5 Angstrom Resolution Crystal Structure Of Transaldolase
From Francisella Tularensis In Covalent Complex With
Arabinose-5-Phosphate
pdb|3UPB|B Chain B, 1.5 Angstrom Resolution Crystal Structure Of Transaldolase
From Francisella Tularensis In Covalent Complex With
Arabinose-5-Phosphate
pdb|4E0C|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Transaldolase
From Francisella Tularensis (Phosphate-Free)
pdb|4E0C|B Chain B, 1.8 Angstrom Resolution Crystal Structure Of Transaldolase
From Francisella Tularensis (Phosphate-Free)
Length = 345
Score = 201 bits (512), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/239 (46%), Positives = 152/239 (63%), Gaps = 29/239 (12%)
Query: 3 KLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLAS 62
++++ FG +IL++I G+VS+EVDAR+SF+ +I AK+ I YE GI K+R+LIK+A+
Sbjct: 103 EILVSFGIKILDVIEGKVSSEVDARVSFNSATTIDYAKRIIARYESNGIPKDRVLIKIAA 162
Query: 63 TWEGIQAAKVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISPY---------------- 106
TWEGI+AAK+L+ E GI+CNLTL+F GV L+SP+
Sbjct: 163 TWEGIKAAKLLQKE-GINCNLTLIFDKAQAKACAEAGVYLVSPFVGRITDWQMQQNNLKT 221
Query: 107 --APTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELE 164
A +D GV SV IY YK G+KT+VMGASFRN +++ALAGCD +TI P LLEEL+
Sbjct: 222 FPAIADDDGVNSVKAIYKLYKSHGFKTIVMGASFRNVEQVIALAGCDALTISPVLLEELK 281
Query: 165 NSTTPVDQMLSEKSAKKANLDKIT----LDESAFRWELNEDPMATEKLSDGIRKFAVDS 219
N D+ L K K N D +T + E+ FRW +NE+ MAT KL++GIR F D+
Sbjct: 282 NR----DEHLEVKLTK--NDDVVTQSPQISEADFRWLMNENAMATHKLAEGIRLFTKDT 334
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 22/25 (88%)
Query: 297 KLVILFGTEILNIIPGRVSTEVDAR 321
++++ FG +IL++I G+VS+EVDAR
Sbjct: 103 EILVSFGIKILDVIEGKVSSEVDAR 127
>pdb|3TE9|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of K135m Mutant
Of Transaldolase B (Tala) From Francisella Tularensis In
Complex With Fructose 6-Phosphate
pdb|3TE9|B Chain B, 1.8 Angstrom Resolution Crystal Structure Of K135m Mutant
Of Transaldolase B (Tala) From Francisella Tularensis In
Complex With Fructose 6-Phosphate
pdb|3TKF|A Chain A, 1.5 Angstrom Resolution Crystal Structure Of K135m Mutant
Of Transaldolase B (Tala) From Francisella Tularensis In
Complex With Sedoheptulose 7-Phosphate.
pdb|3TKF|B Chain B, 1.5 Angstrom Resolution Crystal Structure Of K135m Mutant
Of Transaldolase B (Tala) From Francisella Tularensis In
Complex With Sedoheptulose 7-Phosphate
Length = 345
Score = 199 bits (505), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/239 (46%), Positives = 151/239 (63%), Gaps = 29/239 (12%)
Query: 3 KLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLAS 62
++++ FG +IL++I G+VS+EVDAR+SF+ +I AK+ I YE GI K+R+LI +A+
Sbjct: 103 EILVSFGIKILDVIEGKVSSEVDARVSFNSATTIDYAKRIIARYESNGIPKDRVLIMIAA 162
Query: 63 TWEGIQAAKVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISPY---------------- 106
TWEGI+AAK+L+ E GI+CNLTL+F GV L+SP+
Sbjct: 163 TWEGIKAAKLLQKE-GINCNLTLIFDKAQAKACAEAGVYLVSPFVGRITDWQMQQNNLKT 221
Query: 107 --APTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELE 164
A +D GV SV IY YK G+KT+VMGASFRN +++ALAGCD +TI P LLEEL+
Sbjct: 222 FPAIADDDGVNSVKAIYKLYKSHGFKTIVMGASFRNVEQVIALAGCDALTISPVLLEELK 281
Query: 165 NSTTPVDQMLSEKSAKKANLDKIT----LDESAFRWELNEDPMATEKLSDGIRKFAVDS 219
N D+ L K K N D +T + E+ FRW +NE+ MAT KL++GIR F D+
Sbjct: 282 NR----DEHLEVKLTK--NDDVVTQSPQISEADFRWLMNENAMATHKLAEGIRLFTKDT 334
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 22/25 (88%)
Query: 297 KLVILFGTEILNIIPGRVSTEVDAR 321
++++ FG +IL++I G+VS+EVDAR
Sbjct: 103 EILVSFGIKILDVIEGKVSSEVDAR 127
>pdb|3IGX|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of
Transaldolase B (Tala) From Francisella Tularensis.
pdb|3IGX|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of
Transaldolase B (Tala) From Francisella Tularensis
Length = 324
Score = 195 bits (495), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 149/239 (62%), Gaps = 29/239 (12%)
Query: 3 KLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLAS 62
++++ FG +IL++I G+VS+EVDAR+SF+ +I AK+ I YE GI K+R+LIK+A+
Sbjct: 82 EILVSFGIKILDVIEGKVSSEVDARVSFNSATTIDYAKRIIARYESNGIPKDRVLIKIAA 141
Query: 63 TWEGIQAAKVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISPY---------------- 106
TWEGI+AAK+L+ E GI+CNLTL+F GV L+SP+
Sbjct: 142 TWEGIKAAKLLQKE-GINCNLTLIFDKAQAKACAEAGVYLVSPFVGRITDWQXQQNNLKT 200
Query: 107 --APTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELE 164
A +D GV SV IY YK G+KT+V GASFRN +++ALAGCD +TI P LLEEL+
Sbjct: 201 FPAIADDDGVNSVKAIYKLYKSHGFKTIVXGASFRNVEQVIALAGCDALTISPVLLEELK 260
Query: 165 NSTTPVDQMLSEKSAKKANLDKIT----LDESAFRWELNEDPMATEKLSDGIRKFAVDS 219
N D+ L K K N D +T + E+ FRW NE+ AT KL++GIR F D+
Sbjct: 261 NR----DEHLEVKLTK--NDDVVTQSPQISEADFRWLXNENAXATHKLAEGIRLFTKDT 313
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 22/25 (88%)
Query: 297 KLVILFGTEILNIIPGRVSTEVDAR 321
++++ FG +IL++I G+VS+EVDAR
Sbjct: 82 EILVSFGIKILDVIEGKVSSEVDAR 106
>pdb|1VPX|A Chain A, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|B Chain B, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|C Chain C, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|D Chain D, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|E Chain E, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|F Chain F, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|G Chain G, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|H Chain H, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|I Chain I, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|J Chain J, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|K Chain K, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|L Chain L, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|M Chain M, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|N Chain N, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|O Chain O, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|P Chain P, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|Q Chain Q, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|R Chain R, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|S Chain S, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|T Chain T, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
Length = 230
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 17/159 (10%)
Query: 11 EILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLASTWEGIQAA 70
EI +++ G VS EV +S D + + +A++ ++ E ++IK+ T +GI+A
Sbjct: 57 EICDLVKGPVSAEV---VSLDYEGMVREARELAQI-------SEYVVIKIPMTPDGIKAV 106
Query: 71 KVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISPYAPTED----PGVVSVTKIYNYYKK 126
K L +E GI N+TL+F G T +SP+ D G+ + +I Y
Sbjct: 107 KTLSAE-GIKTNVTLVFSPAQAILAAKAGATYVSPFVGRMDDLSNDGMRMLGEIVEIYNN 165
Query: 127 FGYKTVVMGASFRNTGEIL--ALAGCDLMTIGPKLLEEL 163
+G++T ++ AS R+ ++ AL G D++T+ +LE+L
Sbjct: 166 YGFETEIIAASIRHPMHVVEAALMGVDIVTMPFAVLEKL 204
>pdb|3S0C|A Chain A, Transaldolase Wt Of Thermoplasma Acidophilum
pdb|3S0C|B Chain B, Transaldolase Wt Of Thermoplasma Acidophilum
pdb|3S0C|C Chain C, Transaldolase Wt Of Thermoplasma Acidophilum
pdb|3S0C|D Chain D, Transaldolase Wt Of Thermoplasma Acidophilum
pdb|3S0C|E Chain E, Transaldolase Wt Of Thermoplasma Acidophilum
pdb|3S1U|A Chain A, Transaldolase From Thermoplasma Acidophilum In Complex
With D- Erythrose 4-Phosphate
pdb|3S1U|B Chain B, Transaldolase From Thermoplasma Acidophilum In Complex
With D- Erythrose 4-Phosphate
pdb|3S1U|C Chain C, Transaldolase From Thermoplasma Acidophilum In Complex
With D- Erythrose 4-Phosphate
pdb|3S1U|D Chain D, Transaldolase From Thermoplasma Acidophilum In Complex
With D- Erythrose 4-Phosphate
pdb|3S1U|E Chain E, Transaldolase From Thermoplasma Acidophilum In Complex
With D- Erythrose 4-Phosphate
pdb|3S1V|A Chain A, Transaldolase From Thermoplasma Acidophilum In Complex
With D-Fructose 6-Phosphate Schiff-Base Intermediate
pdb|3S1V|B Chain B, Transaldolase From Thermoplasma Acidophilum In Complex
With D-Fructose 6-Phosphate Schiff-Base Intermediate
pdb|3S1V|C Chain C, Transaldolase From Thermoplasma Acidophilum In Complex
With D-Fructose 6-Phosphate Schiff-Base Intermediate
pdb|3S1V|D Chain D, Transaldolase From Thermoplasma Acidophilum In Complex
With D-Fructose 6-Phosphate Schiff-Base Intermediate
pdb|3S1V|E Chain E, Transaldolase From Thermoplasma Acidophilum In Complex
With D-Fructose 6-Phosphate Schiff-Base Intermediate
pdb|3S1X|A Chain A, Transaldolase From Thermoplasma Acidophilum In Complex
With D- Sedoheptulose 7-Phosphate Schiff-Base
Intermediate
pdb|3S1X|B Chain B, Transaldolase From Thermoplasma Acidophilum In Complex
With D- Sedoheptulose 7-Phosphate Schiff-Base
Intermediate
pdb|3S1X|C Chain C, Transaldolase From Thermoplasma Acidophilum In Complex
With D- Sedoheptulose 7-Phosphate Schiff-Base
Intermediate
pdb|3S1X|D Chain D, Transaldolase From Thermoplasma Acidophilum In Complex
With D- Sedoheptulose 7-Phosphate Schiff-Base
Intermediate
pdb|3S1X|E Chain E, Transaldolase From Thermoplasma Acidophilum In Complex
With D- Sedoheptulose 7-Phosphate Schiff-Base
Intermediate
Length = 223
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 17/159 (10%)
Query: 11 EILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLASTWEGIQAA 70
EIL I+ G VS EV +S + + +A+K + + A ++K+ T +G++A
Sbjct: 48 EILKIVDGPVSVEV---VSTKYEGMVEEARKIHGLGDNA-------VVKIPMTEDGLRAI 97
Query: 71 KVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISPYAPTED----PGVVSVTKIYNYYKK 126
K L SE+ I+ N TL+F GVT +SP+ D G+ + I +
Sbjct: 98 KTLSSEH-INTNCTLVFNPIQALLAAKAGVTYVSPFVGRLDDIGEDGMQIIDMIRTIFNN 156
Query: 127 FGYKTVVMGASFRNTGEIL--ALAGCDLMTIGPKLLEEL 163
+ KT ++ AS RN +L A+ G D++T+ +L+ L
Sbjct: 157 YIIKTQILVASIRNPIHVLRSAVIGADVVTVPFNVLKSL 195
>pdb|3S1W|A Chain A, Transaldolase Variant Lys86ala From Thermoplasma
Acidophilum In Complex With Glycerol And Citrate
pdb|3S1W|B Chain B, Transaldolase Variant Lys86ala From Thermoplasma
Acidophilum In Complex With Glycerol And Citrate
pdb|3S1W|C Chain C, Transaldolase Variant Lys86ala From Thermoplasma
Acidophilum In Complex With Glycerol And Citrate
pdb|3S1W|D Chain D, Transaldolase Variant Lys86ala From Thermoplasma
Acidophilum In Complex With Glycerol And Citrate
pdb|3S1W|E Chain E, Transaldolase Variant Lys86ala From Thermoplasma
Acidophilum In Complex With Glycerol And Citrate
Length = 223
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 11 EILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLASTWEGIQAA 70
EIL I+ G VS EV +S + + +A+K + + A ++ + T +G++A
Sbjct: 48 EILKIVDGPVSVEV---VSTKYEGMVEEARKIHGLGDNA-------VVAIPMTEDGLRAI 97
Query: 71 KVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISPYAPTED----PGVVSVTKIYNYYKK 126
K L SE+ I+ N TL+F GVT +SP+ D G+ + I +
Sbjct: 98 KTLSSEH-INTNCTLVFNPIQALLAAKAGVTYVSPFVGRLDDIGEDGMQIIDMIRTIFNN 156
Query: 127 FGYKTVVMGASFRNTGEIL--ALAGCDLMTIGPKLLEEL 163
+ KT ++ AS RN +L A+ G D++T+ +L+ L
Sbjct: 157 YIIKTQILVASIRNPIHVLRSAVIGADVVTVPFNVLKSL 195
>pdb|3R8R|A Chain A, Transaldolase From Bacillus Subtilis
pdb|3R8R|B Chain B, Transaldolase From Bacillus Subtilis
pdb|3R8R|C Chain C, Transaldolase From Bacillus Subtilis
pdb|3R8R|D Chain D, Transaldolase From Bacillus Subtilis
pdb|3R8R|E Chain E, Transaldolase From Bacillus Subtilis
pdb|3R8R|F Chain F, Transaldolase From Bacillus Subtilis
pdb|3R8R|G Chain G, Transaldolase From Bacillus Subtilis
pdb|3R8R|H Chain H, Transaldolase From Bacillus Subtilis
pdb|3R8R|I Chain I, Transaldolase From Bacillus Subtilis
pdb|3R8R|J Chain J, Transaldolase From Bacillus Subtilis
pdb|3R8R|V Chain V, Transaldolase From Bacillus Subtilis
pdb|3R8R|K Chain K, Transaldolase From Bacillus Subtilis
pdb|3R8R|L Chain L, Transaldolase From Bacillus Subtilis
pdb|3R8R|M Chain M, Transaldolase From Bacillus Subtilis
pdb|3R8R|N Chain N, Transaldolase From Bacillus Subtilis
pdb|3R8R|W Chain W, Transaldolase From Bacillus Subtilis
pdb|3R8R|P Chain P, Transaldolase From Bacillus Subtilis
pdb|3R8R|R Chain R, Transaldolase From Bacillus Subtilis
pdb|3R8R|T Chain T, Transaldolase From Bacillus Subtilis
pdb|3R8R|U Chain U, Transaldolase From Bacillus Subtilis
Length = 212
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 11 EILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLASTWEGIQAA 70
EI +++ G VS EV +S + I + K+ K+ I +K+ T +G++A
Sbjct: 46 EITDVVKGSVSAEV---ISLKAEEMIEEGKELAKI-------APNITVKIPMTSDGLKAV 95
Query: 71 KVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISPYAPTEDP----GVVSVTKIYNYYKK 126
+ L ++ GI N+TL+F G T +SP+ D G+ ++++ +
Sbjct: 96 RAL-TDLGIKTNVTLIFNANQALLAARAGATYVSPFLGRLDDIGHNGLDLISEVKQIFDI 154
Query: 127 FGYKTVVMGASFRNTGEIL--ALAGCDLMTIGPKLLEEL 163
G T ++ AS R+ + AL G + T+ K++ L
Sbjct: 155 HGLDTQIIAASIRHPQHVTEAALRGAHIGTMPLKVIHAL 193
>pdb|3R5E|A Chain A, Transaldolase From Corynebacterium Glutamicum
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Query: 18 GRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLASTWEGIQAAKVLESEY 77
GRVS EVD R+S D+DA++A+AK+ A +D+ ++IK+ +T + A +E
Sbjct: 103 GRVSIEVDPRISADRDATLAQAKELW-----AKVDRPNVMIKIPATPGSLPAITDALAE- 156
Query: 78 GIHCNLTLLF 87
GI N+TL+F
Sbjct: 157 GISVNVTLIF 166
>pdb|1WX0|A Chain A, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|B Chain B, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|C Chain C, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|D Chain D, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|E Chain E, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|F Chain F, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|G Chain G, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|H Chain H, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|I Chain I, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|J Chain J, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
Length = 223
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 12 ILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLASTWEGIQAAK 71
I + G VS EV A + +A +A+ ++ ++ I++KL +T EG++A K
Sbjct: 55 ICETVGGPVSAEVTA---LEAEAMVAEGRRLAAIHP-------NIVVKLPTTEEGLKACK 104
Query: 72 VLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISPYAPTED----PGVVSVTKIYNYYKKF 127
L +E GI N+TL+F G + +SP+ D G + +I +
Sbjct: 105 RLSAE-GIKVNMTLIFSANQALLAARAGASYVSPFLGRVDDISWDGGELLREIVEMIQVQ 163
Query: 128 GYKTVVMGASFRNTGEI--LALAGCDLMTIGPKLLEEL 163
V+ AS R+ + AL G D+ T+ + ++L
Sbjct: 164 DLPVKVIAASIRHPRHVTEAALLGADIATMPHAVFKQL 201
>pdb|1TPZ|A Chain A, Crystal Structure Of Iigp1: A Paradigm For Interferon
Inducible P47 Resistance Gtpases
pdb|1TPZ|B Chain B, Crystal Structure Of Iigp1: A Paradigm For Interferon
Inducible P47 Resistance Gtpases
pdb|1TQ2|A Chain A, Crystal Structure Of Iigp1: A Paradigm For Interferon
Inducible P47 Resistance Gtpases
pdb|1TQ2|B Chain B, Crystal Structure Of Iigp1: A Paradigm For Interferon
Inducible P47 Resistance Gtpases
Length = 422
Score = 27.7 bits (60), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 11/59 (18%)
Query: 8 FGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEA-GIDKERILIKLASTWE 65
F +++NIIP L+F D+ + KK +K Y G+D E L +LA WE
Sbjct: 287 FAADLVNIIPS---------LTFLLDSDLETLKKSMKFYRTVFGVD-ETSLQRLARDWE 335
>pdb|1TQ6|A Chain A, Crystal Structure Of Iigp1: A Paradigm For Interferon
Inducible P47 Resistance Gtpases
Length = 413
Score = 27.7 bits (60), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 11/59 (18%)
Query: 8 FGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEA-GIDKERILIKLASTWE 65
F +++NIIP L+F D+ + KK +K Y G+D E L +LA WE
Sbjct: 287 FAADLVNIIPS---------LTFLLDSDLETLKKSMKFYRTVFGVD-ETSLQRLARDWE 335
>pdb|1TQD|A Chain A, Crystal Structure Of Iigp1: A Paradigm For Interferon
Inducible P47 Resistance Gtpases
pdb|1TQD|B Chain B, Crystal Structure Of Iigp1: A Paradigm For Interferon
Inducible P47 Resistance Gtpases
Length = 413
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 11/59 (18%)
Query: 8 FGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEA-GIDKERILIKLASTWE 65
F +++NIIP L+F D+ + KK +K Y G+D E L +LA WE
Sbjct: 287 FAADLVNIIPS---------LTFLLDSDLETLKKSMKFYRTVFGVD-ETSLQRLARDWE 335
>pdb|1TQ4|A Chain A, Crystal Structure Of Iigp1: A Paradigm For Interferon
Inducible P47 Resistance Gtpases
Length = 413
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 11/59 (18%)
Query: 8 FGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEA-GIDKERILIKLASTWE 65
F +++NIIP L+F D+ + KK +K Y G+D E L +LA WE
Sbjct: 287 FAADLVNIIPS---------LTFLLDSDLETLKKSMKFYRTVFGVD-ETSLQRLARDWE 335
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.133 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,855,761
Number of Sequences: 62578
Number of extensions: 280101
Number of successful extensions: 947
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 838
Number of HSP's gapped (non-prelim): 82
length of query: 321
length of database: 14,973,337
effective HSP length: 99
effective length of query: 222
effective length of database: 8,778,115
effective search space: 1948741530
effective search space used: 1948741530
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)