RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy1096
(239 letters)
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 248 bits (635), Expect = 2e-82
Identities = 65/160 (40%), Positives = 101/160 (63%), Gaps = 1/160 (0%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSI 135
PENI+ +R S IKII+FG A+++ P R+LF PE+ PE+ ++ + +DMWS+
Sbjct: 130 PENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSL 189
Query: 136 GVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEKR 195
G + YVLLSG++PF+ E + + NI AE+ FD+EAF+ +S +A DF+ LLVK ++ R
Sbjct: 190 GTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSR 249
Query: 196 LTAKQCLSHLWIAQKDSSPGVNKIISTDKLKKYIYRRKWQ 235
+TA + L H W+ QK K+I T K ++Y + +
Sbjct: 250 MTASEALQHPWLKQKIERVS-TKVIRTLKHRRYYHTLIKK 288
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 247 bits (632), Expect = 5e-82
Identities = 82/165 (49%), Positives = 112/165 (67%), Gaps = 5/165 (3%)
Query: 76 PENIMCVSRT--SHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMW 133
PENIM + R IKIIDFGLA KI+ + + +FGTPEF+ PEI+NYEP+G+E+DMW
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
Query: 134 SIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKE 193
SIGVITY+LLSG SPF+G+ ET AN++ ++F+DE F S AKDFI LLVK +
Sbjct: 202 SIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK 261
Query: 194 KRLTAKQCLSHLWIAQKDSSPGVNKI---ISTDKLKKYIYRRKWQ 235
KR+T + L H WI KD+ +++ ++ +K KK+ R+K
Sbjct: 262 KRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEKFKKFAARKKSN 306
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 246 bits (631), Expect = 6e-82
Identities = 83/165 (50%), Positives = 111/165 (67%), Gaps = 5/165 (3%)
Query: 76 PENIMCVSRTSH--HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMW 133
PENIM + + HIK+IDFGLA +I + +FGTPEF+ PEI+NYEP+G+E+DMW
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMW 202
Query: 134 SIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKE 193
SIGVITY+LLSG SPF+G+ ET ANIT +DFD+E F SE AKDFI LLVK
Sbjct: 203 SIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETR 262
Query: 194 KRLTAKQCLSHLWIAQKDSSPGVNK---IISTDKLKKYIYRRKWQ 235
KRLT ++ L H WI D+ + + +++ + +K RR+W+
Sbjct: 263 KRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRWK 307
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 246 bits (629), Expect = 4e-81
Identities = 84/165 (50%), Positives = 111/165 (67%), Gaps = 5/165 (3%)
Query: 76 PENIMCVSRTSH--HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMW 133
PENIM + + HIK+IDFGLA +I + +FGTPEF+ PEI+NYEP+G+E+DMW
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMW 202
Query: 134 SIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKE 193
SIGVITY+LLSG SPF+G+ ET ANIT +DFD+E F SE AKDFI LLVK
Sbjct: 203 SIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETR 262
Query: 194 KRLTAKQCLSHLWIAQKDSSPGVNK---IISTDKLKKYIYRRKWQ 235
KRLT ++ L H WI D+ + + +++ + KK RR+W+
Sbjct: 263 KRLTIQEALRHPWITPVDTQQAMVRRESVVNLENFKKQYVRRRWK 307
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 244 bits (624), Expect = 8e-81
Identities = 69/163 (42%), Positives = 103/163 (63%), Gaps = 3/163 (1%)
Query: 76 PENIMCVSRTS-HHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWS 134
P+NI+ S IKI+DFG+++KI R + GTPE++ PEI+NY+PI +DMW+
Sbjct: 159 PQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWN 218
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
IG+I Y+LL+ SPF+GE++ ET+ NI++ D+ +E F ++S+ A DFI SLLVK EK
Sbjct: 219 IGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEK 278
Query: 195 RLTAKQCLSHLWIAQKDSSPGVNKI--ISTDKLKKYIYRRKWQ 235
R TA+ CLSH W+ Q D + S+ + + + R
Sbjct: 279 RPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQDHSVRSSED 321
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 242 bits (620), Expect = 2e-79
Identities = 75/164 (45%), Positives = 106/164 (64%), Gaps = 2/164 (1%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSI 135
PENIMC ++ + +KIIDFGLA K+NPD +V T EF PEI++ EP+G +DMW+I
Sbjct: 177 PENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAI 236
Query: 136 GVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEKR 195
GV+ YVLLSGLSPF GE+D ET N+ R +++FD++AF ++S +AKDFI +LL K KR
Sbjct: 237 GVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKR 296
Query: 196 LTAKQCLSHLWIAQKDSSPGVNKIISTDKLKKYIYRRKWQFSRH 239
LT L H W+ S+ I + + K + K +++
Sbjct: 297 LTVHDALEHPWLKGDHSNL--TSRIPSSRYNKIRQKIKEKYADW 338
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 247 bits (632), Expect = 4e-79
Identities = 68/163 (41%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSI 135
PENIM ++ S+ +K+IDFGL ++P +V GT EF PE+ +P+G +DMWS+
Sbjct: 283 PENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSV 342
Query: 136 GVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEKR 195
GV++Y+LLSGLSPF GEND ET N+ +++ DD AF +SED KDFI LL+ R
Sbjct: 343 GVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTR 402
Query: 196 LTAKQCLSHLWIAQKDSSPGVNKIISTDKLKKYIYRRKWQFSR 238
+T Q L H W+ ++PG + I + + K K ++
Sbjct: 403 MTIHQALEHPWL-TPGNAPGRDSQIPSSRYTKIRDSIKTKYDA 444
Score = 65.2 bits (159), Expect = 2e-12
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSERLFES 57
P+PP I + +V+++W P DGG ++T Y +E + A W ++ +
Sbjct: 10 PEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAKSRYTY 66
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 240 bits (615), Expect = 8e-79
Identities = 74/158 (46%), Positives = 107/158 (67%), Gaps = 4/158 (2%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSI 135
PENI+CV+R + IKIIDFGLA++ P +V FGTPEF+ PE++NY+ + +DMWS+
Sbjct: 215 PENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSV 274
Query: 136 GVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEKR 195
GVI Y+LLSGLSPF+G+ND+ET NI +D +DE F+ +SE+AK+FIS LL+K K R
Sbjct: 275 GVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWR 334
Query: 196 LTAKQCLSHLWIAQKDSSPGVNKIISTDKLKKYIYRRK 233
++A + L H W++ ++ +S K K +
Sbjct: 335 ISASEALKHPWLSDHK----LHSRLSAQKKKNRGSDAQ 368
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 230 bits (588), Expect = 8e-76
Identities = 75/141 (53%), Positives = 96/141 (68%), Gaps = 2/141 (1%)
Query: 76 PENIMCVSRT--SHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMW 133
PENIM + + + IK+IDFG+A KI + + +FGTPEF+ PEI+NYEP+G+E+DMW
Sbjct: 136 PENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 195
Query: 134 SIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKE 193
SIGVITY+LLSG SPF+GE ET NI+ +DFD+E F SE AKDFI LLVK +
Sbjct: 196 SIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPK 255
Query: 194 KRLTAKQCLSHLWIAQKDSSP 214
+R+T Q L H WI
Sbjct: 256 RRMTIAQSLEHSWIKAIRRRN 276
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 182 bits (464), Expect = 1e-56
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 7/146 (4%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPP-----RVLFGTPEFIPPEIINY--EPIGI 128
PEN + + S IK++DFGL+++ + GTP F+ PE++N E G
Sbjct: 196 PENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255
Query: 129 ESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLL 188
+ D WS GV+ ++LL G PF G ND++T + + + F++ + LS A+D +S+LL
Sbjct: 256 KCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLL 315
Query: 189 VKRKEKRLTAKQCLSHLWIAQKDSSP 214
+ ++R A + L H WI+Q
Sbjct: 316 NRNVDERFDAMRALQHPWISQFSDKI 341
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 181 bits (461), Expect = 2e-56
Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWS 134
PEN++ ++ + I I DFGL+ K+ + GTP ++ PE++ +P D WS
Sbjct: 134 PENLLYLTPEENSKIMITDFGLS-KMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWS 192
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
IGVITY+LL G PF E +S+ F I ++F+ ++ +SE AKDFI LL K +
Sbjct: 193 IGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNE 252
Query: 195 RLTAKQCLSHLWIAQKDSSPGVNKIISTDKLKKYIYRRKWQ 235
R T ++ LSH WI + + +++K + KW+
Sbjct: 253 RYTCEKALSHPWIDGNTALHRDIYPSVSLQIQKNFAKSKWR 293
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 182 bits (464), Expect = 3e-56
Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 2/162 (1%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWS 134
PEN++ S+ +K+ DFGLA ++N GTP ++ PE++ +P D+W+
Sbjct: 156 PENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWA 215
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
GVI Y+LL G PF E+ +A I +D+ ++ ++ +AK I S+L +K
Sbjct: 216 CGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKK 275
Query: 195 RLTAKQCLSHLWIAQKDSSP-GVNKIISTDKLKKYIYRRKWQ 235
R+TA Q L WI ++ +++ + D LKK+ RRK +
Sbjct: 276 RITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLK 317
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 178 bits (453), Expect = 9e-55
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 3/162 (1%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWS 134
PEN++ + +KI DFGL++ + + + GTP + PEI+ G E DMWS
Sbjct: 176 PENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWS 235
Query: 135 IGVITYVLLSGLSPFMGE-NDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKE 193
+G+ITY+LL G PF E D F I E+ F ++ +S +AKD + L+V +
Sbjct: 236 VGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPK 295
Query: 194 KRLTAKQCLSHLWIAQKDSSPGVNKIISTDKLKKYIYRRKWQ 235
KRLT Q L H W+ ++ V+ + KL+++ RRK +
Sbjct: 296 KRLTTFQALQHPWV-TGKAANFVHMDTAQKKLQEFNARRKLK 336
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 178 bits (453), Expect = 9e-55
Identities = 47/163 (28%), Positives = 85/163 (52%), Gaps = 4/163 (2%)
Query: 76 PENIMCVSRTSHH-IKIIDFGLAQKINPDHPP-RVLFGTPEFIPPEIINYEPIGIESDMW 133
P ++ S+ + +K+ FG+A ++ GTP F+ PE++ EP G D+W
Sbjct: 158 PHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVW 217
Query: 134 SIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKE 193
GVI ++LLSG PF G + F I + ++ + + +SE AKD + +L+
Sbjct: 218 GCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPA 276
Query: 194 KRLTAKQCLSHLWIAQKDSSPGVNKIIST-DKLKKYIYRRKWQ 235
+R+T + L+H W+ ++D + T ++L+K+ RRK +
Sbjct: 277 ERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLK 319
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 174 bits (444), Expect = 4e-54
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 2/152 (1%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWS 134
PEN++ S+ +K+ DFGLA ++N GTP ++ PE++ +P D+W+
Sbjct: 133 PENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWA 192
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
GVI Y+LL G PF E+ +A I +D+ ++ ++ +AK I S+L +K
Sbjct: 193 CGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKK 252
Query: 195 RLTAKQCLSHLWIAQKD-SSPGVNKIISTDKL 225
R+TA Q L WI ++ + +++ + D L
Sbjct: 253 RITADQALKVPWICNRERVASAIHRQDTVDCL 284
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 172 bits (439), Expect = 2e-53
Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWS 134
PENI+ + H IKIIDFGLA+ D GT ++ PE+ + + + D+WS
Sbjct: 152 PENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRD-VTFKCDIWS 210
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
GV+ Y LL+G PF G + E T E ++ E L+ A D + +L K E+
Sbjct: 211 AGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE-CRPLTPQAVDLLKQMLTKDPER 269
Query: 195 RLTAKQCLSHLWIAQ 209
R +A Q L H W Q
Sbjct: 270 RPSAAQVLHHEWFKQ 284
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 175 bits (446), Expect = 9e-53
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 3/163 (1%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPP-RVLFGTPEFIPPEIINYEPIGIESDMW 133
PEN++ S+ +K+ DFGLA ++ + GTP ++ PE++ +P G D+W
Sbjct: 138 PENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLW 197
Query: 134 SIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKE 193
+ GVI Y+LL G PF E+ + I +DF ++ ++ +AKD I+ +L
Sbjct: 198 ACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPS 257
Query: 194 KRLTAKQCLSHLWIAQKDSSPGVNKIIST-DKLKKYIYRRKWQ 235
KR+TA + L H WI+ + + T D LKK+ RRK +
Sbjct: 258 KRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK 300
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 175 bits (446), Expect = 2e-52
Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWS 134
PEN++ S+ IKI+DFGL+ + GT +I PE++ + + D+WS
Sbjct: 164 PENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWS 222
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
IGVI ++LL+G PF G+ D E + + ++ FD ++ +SE AKD I +L ++
Sbjct: 223 IGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQR 282
Query: 195 RLTAKQCLSHLWIAQKDSSPGVNKIISTD-----KLKKYIYRRKWQ 235
R++A+Q L H WI + S + + ++K+ +K
Sbjct: 283 RISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLA 328
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 174 bits (444), Expect = 4e-52
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 7/166 (4%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWS 134
PENI+ S+ IKIIDFGL+ + + GT +I PE++ + D+WS
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWS 207
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
GVI Y+LLSG PF G+N+ + + ++ FD + +S+DAKD I +L
Sbjct: 208 AGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSL 267
Query: 195 RLTAKQCLSHLWIAQKDSSPGVNKIISTD-----KLKKYIYRRKWQ 235
R+TA QCL H WI + S + + ++++ +K
Sbjct: 268 RITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLA 313
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 174 bits (443), Expect = 7e-52
Identities = 50/165 (30%), Positives = 90/165 (54%), Gaps = 6/165 (3%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWS 134
PENI+ ++ S +IKI+DFGL+ + D+ R GT +I PE++ + + D+WS
Sbjct: 174 PENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWS 232
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
GVI Y+LL G PF G+ND + + + ++ FD ++ +S++AK+ I +L K
Sbjct: 233 CGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNK 292
Query: 195 RLTAKQCLSHLWIAQKDSSPGVNKIIST----DKLKKYIYRRKWQ 235
R TA++ L+ WI + ++ + + ++K+ +K
Sbjct: 293 RCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLA 337
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 168 bits (428), Expect = 8e-52
Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEII--NYEPIGIESDM 132
PEN + ++ + +K+IDFGLA + P R GTP ++ P+++ Y G E D
Sbjct: 134 PENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLY---GPECDE 190
Query: 133 WSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRK 192
WS GV+ YVLL G PF DSE I F F ++ + +S A+ I LL K
Sbjct: 191 WSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSP 250
Query: 193 EKRLTAKQCLSHLWIAQKDSSPGVN 217
++R+T+ Q L H W ++ SS N
Sbjct: 251 KQRITSLQALEHEWFEKQLSSSPRN 275
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 171 bits (436), Expect = 4e-51
Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 6/165 (3%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWS 134
PEN++ S++ +I+IIDFGL+ + GT +I PE+++ + D+WS
Sbjct: 154 PENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWS 212
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
GVI Y+LLSG PF G N+ + + + ++ F+ ++ +SE AKD I +L
Sbjct: 213 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 272
Query: 195 RLTAKQCLSHLWIAQKDSSPGVNKIISTD----KLKKYIYRRKWQ 235
R++A+ L H WI + S D ++++ +K
Sbjct: 273 RISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLA 317
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 164 bits (417), Expect = 5e-50
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWS 134
PENI+ S+ IKIIDFGL+ + + GT +I PE++ + D+WS
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWS 207
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
GVI Y+LLSG PF G+N+ + + ++ FD + +S+DAKD I +L
Sbjct: 208 AGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSL 267
Query: 195 RLTAKQCLSHLWIAQKDS 212
R+TA QCL H WI + S
Sbjct: 268 RITATQCLEHPWIQKYSS 285
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 162 bits (413), Expect = 2e-49
Identities = 49/145 (33%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEII------NYEPIGIE 129
PENI+ + IK+ DFG + +++P R + GTP ++ PEII N+ G E
Sbjct: 152 PENILLDDDMN--IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKE 209
Query: 130 SDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLV 189
DMWS GVI Y LL+G PF I + F ++ S+ KD +S LV
Sbjct: 210 VDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLV 269
Query: 190 KRKEKRLTAKQCLSHLWIAQKDSSP 214
+ +KR TA++ L+H + Q
Sbjct: 270 VQPQKRYTAEEALAHPFFQQYVVEE 294
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 157 bits (399), Expect = 7e-47
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 76 PENIMCVSRTSHH--IKIIDFGLAQKINPDHPP-RVLFGTPEFIPPEIINYEPIGIESDM 132
P NI+ V + + I+I DFG A+++ ++ T F+ PE++ + D+
Sbjct: 144 PSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDI 203
Query: 133 WSIGVITYVLLSGLSPFMG---ENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLV 189
WS+GV+ Y +L+G +PF + E A I +F + ++S+ AKD +S +L
Sbjct: 204 WSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLH 263
Query: 190 KRKEKRLTAKQCLSHLWIAQKDSSPGVNKIISTDKLKKYIYRRKWQ 235
+RLTA L H WI D P +L + +
Sbjct: 264 VDPHQRLTAALVLRHPWIVHWDQLP-------QYQLNRQDAPHLVK 302
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 157 bits (399), Expect = 1e-46
Identities = 46/140 (32%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEII------NYEPIGIE 129
PENI+ I++ DFG + + P R L GTP ++ PEI+ + G E
Sbjct: 228 PENILLDDNMQ--IRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKE 285
Query: 130 SDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLV 189
D+W+ GVI + LL+G PF I ++ F ++ S KD IS LL
Sbjct: 286 VDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQ 345
Query: 190 KRKEKRLTAKQCLSHLWIAQ 209
E RLTA+Q L H + +
Sbjct: 346 VDPEARLTAEQALQHPFFER 365
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 155 bits (395), Expect = 2e-46
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIIN---YEPIGIESD 131
PEN++ S+ IKI DFG ++ + R L GTP ++ PE++ D
Sbjct: 142 PENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVD 201
Query: 132 MWSIGVITYVLLSGLSPFMGENDSET-FANITRAEFDFDDEAFEALSEDAKDFISSLLVK 190
WS+GVI ++ LSG PF + IT +++F E + +SE A D + LLV
Sbjct: 202 CWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVV 261
Query: 191 RKEKRLTAKQCLSHLWIAQKDSSPGVNKIISTDKLK 226
+ R T ++ L H W+ +D ++S +
Sbjct: 262 DPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENES 297
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 157 bits (398), Expect = 4e-46
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 6/163 (3%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWS 134
PEN++ S+ + +K+ DFG A++ + TP ++ PE++ E DMWS
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 248
Query: 135 IGVITYVLLSGLSPFMGENDSET----FANITRAEFDFDDEAFEALSEDAKDFISSLLVK 190
+GVI Y+LL G PF + I +++F + + +SE+ K I +LL
Sbjct: 249 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT 308
Query: 191 RKEKRLTAKQCLSHLWIAQKDSSPGVNKIISTDKLKKYIYRRK 233
+R+T + ++H WI Q P + ++ LK+ R +
Sbjct: 309 EPTQRMTITEFMNHPWIMQSTKVPQTP-LHTSRVLKEDKERWE 350
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 154 bits (391), Expect = 9e-46
Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPP-RVLFGTPEFIPPEIINYEPIGIESDMW 133
PEN++ + IKIIDFG A+ PD+ P + T + PE++N D+W
Sbjct: 134 PENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLW 193
Query: 134 SIGVITYVLLSGLSPFMGENDS-------ETFANITRAEFDFDDEAFEALSEDAKDFISS 186
S+GVI Y +LSG PF + S E I + +F F+ EA++ +S++AKD I
Sbjct: 194 SLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQG 253
Query: 187 LLVKRKEKRLTAKQCLSHLWIAQKDSSP 214
LL KRL + W+
Sbjct: 254 LLTVDPNKRLKMSGLRYNEWLQDGSQLS 281
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 153 bits (388), Expect = 2e-45
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 15/171 (8%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLF---GTPEFIPPEIINYEPIGIESD 131
PEN++ S+ +K+ DFG A++ + L TP ++ PE++ E D
Sbjct: 156 PENLLYTSKEKDAVLKLTDFGFAKETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCD 211
Query: 132 MWSIGVITYVLLSGLSPFMGENDSET----FANITRAEFDFDDEAFEALSEDAKDFISSL 187
MWS+GVI Y+LL G PF I ++ F + + +SEDAK I L
Sbjct: 212 MWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLL 271
Query: 188 LVKRKEKRLTAKQCLSHLWIAQKDSSPGVNKIISTDKLK--KYIYRRKWQF 236
L +RLT Q ++H WI Q P + + L+ K + +
Sbjct: 272 LKTDPTERLTITQFMNHPWINQSMVVPQTP-LHTARVLQEDKDHWDEVKEE 321
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 152 bits (387), Expect = 2e-44
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 5/151 (3%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEII---NYEPIGIESD 131
PEN++ S+ IKI DFG ++ + R L GTP ++ PE++ D
Sbjct: 267 PENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVD 326
Query: 132 MWSIGVITYVLLSGLSPFMGENDSET-FANITRAEFDFDDEAFEALSEDAKDFISSLLVK 190
WS+GVI ++ LSG PF + IT +++F E + +SE A D + LLV
Sbjct: 327 CWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVV 386
Query: 191 RKEKRLTAKQCLSHLWIAQKDSSPGVNKIIS 221
+ R T ++ L H W+ +D ++S
Sbjct: 387 DPKARFTTEEALRHPWLQDEDMKRKFQDLLS 417
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 140 bits (356), Expect = 1e-40
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 29/167 (17%)
Query: 76 PENIMCVSRTSHH-IKIIDFGLAQKINPDHPPRVLF--------GTPEFIPPEIINYEPI 126
PENI+C +KI DF L I + + G+ E++ PE++
Sbjct: 139 PENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSE 198
Query: 127 GIES-----DMWSIGVITYVLLSGLSPFMGENDSET---------------FANITRAEF 166
D+WS+GVI Y+LLSG PF+G S+ F +I ++
Sbjct: 199 EASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKY 258
Query: 167 DFDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQCLSHLWIAQKDSS 213
+F D+ + +S AKD IS LLV+ ++RL+A Q L H W+
Sbjct: 259 EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPE 305
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 137 bits (347), Expect = 2e-39
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 27/163 (16%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWS 134
PEN++ S+ + +K+ DFG A E E DMWS
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFA--------------------KETTG-EKYDKSCDMWS 183
Query: 135 IGVITYVLLSGLSPFMGENDSET----FANITRAEFDFDDEAFEALSEDAKDFISSLLVK 190
+GVI Y+LL G PF + I +++F + + +SE+ K I +LL
Sbjct: 184 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT 243
Query: 191 RKEKRLTAKQCLSHLWIAQKDSSPGVNKIISTDKLKKYIYRRK 233
+R+T + ++H WI Q P + ++ LK+ R +
Sbjct: 244 EPTQRMTITEFMNHPWIMQSTKVPQTP-LHTSRVLKEDKERWE 285
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 128 bits (324), Expect = 2e-36
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSI 135
PEN++ S +KI DFG + P L GT +++PPE+I + D+WS+
Sbjct: 137 PENLLLGSA--GELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSL 193
Query: 136 GVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEKR 195
GV+ Y L G PF ET+ I+R EF F D ++E A+D IS LL +R
Sbjct: 194 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----VTEGARDLISRLLKHNPSQR 249
Query: 196 LTAKQCLSHLWIAQKDSSPGVN 217
++ L H WI +SS N
Sbjct: 250 PMLREVLEHPWI-TANSSKPSN 270
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 125 bits (316), Expect = 4e-35
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSI 135
PEN++ + +KI DFG + P R + GT +++PPE+I + + D+W
Sbjct: 142 PENLLMGYK--GELKIADFGWS-VHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCA 198
Query: 136 GVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEKR 195
GV+ Y L G+ PF + +ET I + F LS+ +KD IS LL +R
Sbjct: 199 GVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF----LSDGSKDLISKLLRYHPPQR 254
Query: 196 LTAKQCLSHLWIAQKDSSP 214
L K + H W+ + +S
Sbjct: 255 LPLKGVMEHPWV-KANSRR 272
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 123 bits (311), Expect = 3e-34
Identities = 31/161 (19%), Positives = 60/161 (37%), Gaps = 20/161 (12%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF---------------GTPEFIPPEI 120
P NI S ++KI DFGLA+ ++ L GT ++ E+
Sbjct: 144 PMNIFIDE--SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEV 201
Query: 121 INYEPI-GIESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSED 179
++ + DM+S+G+I + ++ G + +F + + +
Sbjct: 202 LDGTGHYNEKIDMYSLGIIFFEMIYP--FSTGMERVNILKKLRSVSIEFPPDFDDNKMKV 259
Query: 180 AKDFISSLLVKRKEKRLTAKQCLSHLWIAQKDSSPGVNKII 220
K I L+ KR A+ L+ W+ K + + +
Sbjct: 260 EKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKEAL 300
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 121 bits (306), Expect = 1e-32
Identities = 54/227 (23%), Positives = 84/227 (37%), Gaps = 39/227 (17%)
Query: 36 YVVEMKAGTQPWVELSE----RLFESTERGLGH-HSLVTV--DPKILPENIMCVSRTSHH 88
V + E L G+ H HSL + D K P+NI+ + +
Sbjct: 98 LVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLK--PQNILVSTSSRFT 155
Query: 89 -----------IKIIDFGLAQKINPDHPPRVLF-----GTPEFIPPEIIN-------YEP 125
I I DFGL +K++ GT + PE++
Sbjct: 156 ADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRR 215
Query: 126 IGIESDMWSIGVITYVLLS-GLSPFMGENDSETFANITRAEFDFDDEAF---EALSEDAK 181
+ D++S+G + Y +LS G PF + E +NI R F D+ +L +A
Sbjct: 216 LTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEAT 273
Query: 182 DFISSLLVKRKEKRLTAKQCLSHLWIAQKDSSPGVNKIISTDKLKKY 228
D IS ++ KR TA + L H K +S D+L+
Sbjct: 274 DLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLLKVS-DRLEIE 319
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 116 bits (293), Expect = 1e-31
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF-GTPEFIPPEIINYEPIGIESDMWS 134
N++ +IKI DFGLA ++ H GTP +I PEI G+ESD+WS
Sbjct: 140 LSNLLLTRN--MNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWS 197
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
+G + Y LL G PF + T + A+++ LS +AKD I LL +
Sbjct: 198 LGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSF----LSIEAKDLIHQLLRRNPAD 253
Query: 195 RLTAKQCLSHLWIAQKDSSP 214
RL+ L H ++ ++SS
Sbjct: 254 RLSLSSVLDHPFM-SRNSST 272
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 118 bits (298), Expect = 2e-31
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 18/181 (9%)
Query: 61 GLGH-HSLVTV--DPKILPENIMCVSRTSHH---IKIIDFGLAQKINPDHPPRVLF---- 110
GL H HSL V D K P NI+ +H I DFGL +K+
Sbjct: 130 GLAHLHSLNIVHRDLK--PHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP 187
Query: 111 GTPEFIPPEIIN---YEPIGIESDMWSIGVITYVLLS-GLSPFMGENDSETFANITRAEF 166
GT +I PE+++ E D++S G + Y ++S G PF + +
Sbjct: 188 GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSL 247
Query: 167 DFDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQCLSHLWIAQKDSSPGVNKIISTDKLK 226
D + A++ I ++ +KR +AK L H + + + +S D+++
Sbjct: 248 DC-LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQFFQDVS-DRIE 305
Query: 227 K 227
K
Sbjct: 306 K 306
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 117 bits (294), Expect = 2e-31
Identities = 21/148 (14%), Positives = 44/148 (29%), Gaps = 24/148 (16%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYE----------- 124
P +I+ + + + + F + + F PPE+
Sbjct: 234 PVDIV-LDQRGG-VFLTGFEHLVRDGARVVSS---VSRGFEPPELEARRATISYHRDRRT 288
Query: 125 PIGIESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFI 184
+ D W++G++ Y + P + I R+ + + + +
Sbjct: 289 LMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKNI--------PQPVRALL 340
Query: 185 SSLLVKRKEKRLTAKQCLSHLWIAQKDS 212
L KE RL Q + Q +
Sbjct: 341 EGFLRYPKEDRLLPLQAMETPEYEQLRT 368
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 115 bits (290), Expect = 3e-31
Identities = 41/140 (29%), Positives = 60/140 (42%), Gaps = 8/140 (5%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKI-NPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWS 134
N+ +KI DFGLA K+ +VL GTP +I PE+++ + E D+WS
Sbjct: 143 LGNLFLNED--LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWS 200
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
IG I Y LL G PF ET+ I + E+ ++ A I +L
Sbjct: 201 IGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTA 256
Query: 195 RLTAKQCLSHLWIAQKDSSP 214
R T + L+ + P
Sbjct: 257 RPTINELLNDEFF-TSGYIP 275
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 116 bits (292), Expect = 3e-31
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 21/157 (13%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPI--GIESDMW 133
P NI+ +K+ DFG + + D + GT EF+PPE + E G + D+W
Sbjct: 180 PSNILMDKN--GRVKLSDFGES-EYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIW 236
Query: 134 SIGVITYVLLSGLSPFMGE-NDSETFANITRAEFDF---------------DDEAFEALS 177
S+G+ YV+ + PF + + E F NI ++ + LS
Sbjct: 237 SLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLS 296
Query: 178 EDAKDFISSLLVKRKEKRLTAKQCLSHLWIAQKDSSP 214
+ DF+ L K +R+T++ L H W+A +
Sbjct: 297 NEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIED 333
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 116 bits (291), Expect = 4e-31
Identities = 36/167 (21%), Positives = 59/167 (35%), Gaps = 35/167 (20%)
Query: 76 PENIMCVSRTSHH--IKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPI------- 126
P NIM V K+ DFG A+++ D L+GT E++ P++ +
Sbjct: 140 PGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKK 199
Query: 127 -GIESDMWSIGVITYVLLSGLSPF----MGENDSETFANITRA----------------- 164
G D+WSIGV Y +G PF + E I
Sbjct: 200 YGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPI 259
Query: 165 EFDFDDEAFEALSEDAKD----FISSLLVKRKEKRLTAKQCLSHLWI 207
++ D +LS + ++++L +EK Q +
Sbjct: 260 DWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 115 bits (290), Expect = 7e-31
Identities = 41/140 (29%), Positives = 60/140 (42%), Gaps = 8/140 (5%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKI-NPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWS 134
N+ +KI DFGLA K+ +VL GTP +I PE+++ + E D+WS
Sbjct: 169 LGNLFLNED--LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWS 226
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
IG I Y LL G PF ET+ I + E+ ++ A I +L
Sbjct: 227 IGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTA 282
Query: 195 RLTAKQCLSHLWIAQKDSSP 214
R T + L+ + P
Sbjct: 283 RPTINELLNDEFF-TSGYIP 301
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 115 bits (289), Expect = 1e-30
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 20/169 (11%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF---GTPEFIPPEII----------- 121
P N + V +K+IDFG+A ++ PD V GT ++PPE I
Sbjct: 136 PANFLIVDGM---LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 192
Query: 122 NYEPIGIESDMWSIGVITYVLLSGLSPFMGENDS-ETFANITRAEFDFDDEAFEALSEDA 180
+ I +SD+WS+G I Y + G +PF + I + + +D
Sbjct: 193 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI--PEKDL 250
Query: 181 KDFISSLLVKRKEKRLTAKQCLSHLWIAQKDSSPGVNKIISTDKLKKYI 229
+D + L + ++R++ + L+H ++ + +T+++K +
Sbjct: 251 QDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVL 299
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 113 bits (285), Expect = 2e-30
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 21/154 (13%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF---GTPEFIPPEIINYEP------- 125
P N + V +K+IDFG+A ++ PD V GT ++PPE I
Sbjct: 155 PANFLIVDGM---LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 211
Query: 126 ----IGIESDMWSIGVITYVLLSGLSPFMGENDS-ETFANITRAEFDFDDEAFEALSEDA 180
I +SD+WS+G I Y + G +PF + I + + +D
Sbjct: 212 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI--PEKDL 269
Query: 181 KDFISSLLVKRKEKRLTAKQCLSHLWIAQKDSSP 214
+D + L + ++R++ + L+H ++ Q + P
Sbjct: 270 QDVLKCCLKRDPKQRISIPELLAHPYV-QIQTHP 302
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 112 bits (282), Expect = 2e-29
Identities = 37/169 (21%), Positives = 71/169 (42%), Gaps = 20/169 (11%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF---GTPEFIPPEIINYEP------- 125
P N + V +K+IDFG+A ++ PD V G ++PPE I
Sbjct: 183 PANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGK 239
Query: 126 ----IGIESDMWSIGVITYVLLSGLSPFMGENDS-ETFANITRAEFDFDDEAFEALSEDA 180
I +SD+WS+G I Y + G +PF + I + + +D
Sbjct: 240 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI--PEKDL 297
Query: 181 KDFISSLLVKRKEKRLTAKQCLSHLWIAQKDSSPGVNKIISTDKLKKYI 229
+D + L + ++R++ + L+H ++ + +T+++K +
Sbjct: 298 QDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVL 346
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 110 bits (277), Expect = 6e-29
Identities = 22/141 (15%), Positives = 44/141 (31%), Gaps = 11/141 (7%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEII--NYEPIGIESDMW 133
P+N+ + + + D K+ P + P E + + + W
Sbjct: 222 PDNLF-IMPDGR-LMLGDVSALWKVGTRGPASS--VPVTYAPREFLNASTATFTHALNAW 277
Query: 134 SIGVITYVLLSGLSPFMGENDS--ETFANITRAEFDFDDEAFEA---LSEDAKDFISSLL 188
+G+ Y + PF ++ + D AF + L + K I L
Sbjct: 278 QLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFL 337
Query: 189 VKRKEKRLTAKQCLSHLWIAQ 209
+ +RL + + Q
Sbjct: 338 NFDRRRRLLPLEAMETPEFLQ 358
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 108 bits (271), Expect = 3e-28
Identities = 40/140 (28%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEP-IGIESDMWS 134
EN++ + +IKI DFG + + G P + PE+ + G E D+WS
Sbjct: 142 AENLLLDAD--MNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWS 199
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
+GVI Y L+SG PF G+N E + R ++ +S D ++ + LV K
Sbjct: 200 LGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY----MSTDCENLLKRFLVLNPIK 255
Query: 195 RLTAKQCLSHLWIAQKDSSP 214
R T +Q + WI
Sbjct: 256 RGTLEQIMKDRWINAGHEED 275
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 105 bits (263), Expect = 2e-27
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 61 GLGH-HSLVTVDPKIL-----PENIMCVSRTSHHIKIIDFGLAQKINPDHP-PRVLFGTP 113
L H +L P N+ ++K+ DFGLA+ +N D + GTP
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDG--KQNVKLGDFGLARILNHDTSFAKTFVGTP 180
Query: 114 EFIPPEIINYEPIGIESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAF 173
++ PE +N +SD+WS+G + Y L + + PF + E I +F +
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY 240
Query: 174 EALSEDAKDFISSLLVKRKEKRLTAKQCLSHLWIAQ 209
S++ + I+ +L + R + ++ L + I +
Sbjct: 241 ---SDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 105 bits (264), Expect = 3e-27
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 13/130 (10%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRV----LFGTPEFIPPEIINYEPIGIES 130
PENI+ HI+I DFG A K+ + GT +++ PE++ + S
Sbjct: 158 PENILL---NEDMHIQITDFGTA-KVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS 213
Query: 131 DMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVK 190
D+W++G I Y L++GL PF N+ F I + E+DF ++ A+D + LLV
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKLLVL 269
Query: 191 RKEKRLTAKQ 200
KRL ++
Sbjct: 270 DATKRLGCEE 279
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 105 bits (264), Expect = 7e-27
Identities = 34/166 (20%), Positives = 55/166 (33%), Gaps = 35/166 (21%)
Query: 76 PENIMCVSRTSHH--IKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPI------- 126
P NIM V K+ DFG A+++ D L+GT E++ P++ +
Sbjct: 140 PGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKK 199
Query: 127 -GIESDMWSIGVITYVLLSGLSPF----MGENDSETFANITRAEFDFDDEAFE------- 174
G D+WSIGV Y +G PF + E I + +
Sbjct: 200 YGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPI 259
Query: 175 --------------ALSEDAKDFISSLLVKRKEKRLTAKQCLSHLW 206
L ++++L +EK Q +
Sbjct: 260 DWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 103 bits (260), Expect = 1e-26
Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 61 GLGH-HSLVTV--DPKILPENIMCVSRTSHHIKIIDFGLA-QKINPDHPPRVLFGTPEFI 116
LGH H + D K PENIM + H+K+ DFGL + I+ GT E++
Sbjct: 133 ALGHLHQKGIIYRDLK--PENIMLNHQG--HVKLTDFGLCKESIHDGTVTHTFCGTIEYM 188
Query: 117 PPEIINYEPIGIESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEAL 176
PEI+ D WS+G + Y +L+G PF GEN +T I + + + L
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPY----L 244
Query: 177 SEDAKDFISSLLVKRKEKRL 196
+++A+D + LL + RL
Sbjct: 245 TQEARDLLKKLLKRNAASRL 264
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 103 bits (258), Expect = 1e-26
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 14/139 (10%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF----GTPEFIPPEIINYEP---IGI 128
P N++ HIKI DFG++ + L GTP F+ PE ++ G
Sbjct: 165 PSNLLVGE--DGHIKIADFGVSNEFKGSDA---LLSNTVGTPAFMAPESLSETRKIFSGK 219
Query: 129 ESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLL 188
D+W++GV Y + G PFM E + I +F D ++ED KD I+ +L
Sbjct: 220 ALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPD--QPDIAEDLKDLITRML 277
Query: 189 VKRKEKRLTAKQCLSHLWI 207
K E R+ + H W+
Sbjct: 278 DKNPESRIVVPEIKLHPWV 296
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 103 bits (260), Expect = 1e-26
Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 61 GLGH-HSLVTV--DPKILPENIMCVSRTSHHIKIIDFGLA-QKINPDHPPRVLFGTPEFI 116
GL HS V D K +NI+ HIKI DFG+ + + D GTP++I
Sbjct: 130 GLQFLHSKGIVYRDLK--LDNILLDKDG--HIKIADFGMCKENMLGDAKTNTFCGTPDYI 185
Query: 117 PPEIINYEPIGIESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEAL 176
PEI+ + D WS GV+ Y +L G SPF G+++ E F +I + L
Sbjct: 186 APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW----L 241
Query: 177 SEDAKDFISSLLVKRKEKRLTAKQ 200
++AKD + L V+ EKRL +
Sbjct: 242 EKEAKDLLVKLFVREPEKRLGVRG 265
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 105 bits (262), Expect = 2e-26
Identities = 20/141 (14%), Positives = 44/141 (31%), Gaps = 17/141 (12%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRV--LFGTPEFIPPEIINYEP-----IGI 128
P +I+ + + + + F + + F PE ++ + +
Sbjct: 239 PVDIV-LDQ-RGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTF 296
Query: 129 ESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLL 188
D W++G+ Y + P + I R+ + + + + + L
Sbjct: 297 AFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKN--------IPQPVRALLEGFL 348
Query: 189 VKRKEKRLTAKQCLSHLWIAQ 209
KE RL Q + Q
Sbjct: 349 RYPKEDRLLPLQAMETPEYEQ 369
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 104 bits (262), Expect = 2e-26
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPR--VLFGTPEFIPPEIINYEPI----GIE 129
P+N++ S H+K+ DFG K+N + R GTP++I PE++ + G E
Sbjct: 196 PDNMLLDK--SGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRE 253
Query: 130 SDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLV 189
D WS+GV Y +L G +PF ++ T++ I + +S++AK+ I + L
Sbjct: 254 CDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT 313
Query: 190 KRKEKRL 196
R E RL
Sbjct: 314 DR-EVRL 319
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 103 bits (259), Expect = 2e-26
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 61 GLGH-HSLVTV--DPKILPENIMCVSRTSHHIKIIDFGLA-QKINPDHPPRVLFGTPEFI 116
L H HSL + D K PENI+ HIK+ DFGL+ + I+ + GT E++
Sbjct: 138 ALDHLHSLGIIYRDLK--PENILLDE--EGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 193
Query: 117 PPEIINYEPIGIESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEAL 176
PE++N +D WS GV+ + +L+G PF G++ ET I +A+ L
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF----L 249
Query: 177 SEDAKDFISSLLVKRKEKRL 196
S +A+ + L + RL
Sbjct: 250 SPEAQSLLRMLFKRNPANRL 269
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 105 bits (264), Expect = 2e-26
Identities = 42/140 (30%), Positives = 61/140 (43%), Gaps = 9/140 (6%)
Query: 61 GLGH-HSLVTV--DPKILPENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFI 116
GL H V D K PENI+ H HI+I D GLA + + GT ++
Sbjct: 298 GLEDLHRERIVYRDLK--PENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYM 352
Query: 117 PPEIINYEPIGIESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEAL 176
PE++ E D W++G + Y +++G SPF + R + +E E
Sbjct: 353 APEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERF 412
Query: 177 SEDAKDFISSLLVKRKEKRL 196
S A+ S LL K +RL
Sbjct: 413 SPQARSLCSQLLCKDPAERL 432
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 103 bits (259), Expect = 2e-26
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 11/139 (7%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIIN---YEPIGIESDM 132
EN + + +KI DFG ++ P+ GTP +I PE++ Y+ G +D+
Sbjct: 144 LENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYD--GKIADV 201
Query: 133 WSIGVITYVLLSGLSPFMGENDSETF----ANITRAEFDFDDEAFEALSEDAKDFISSLL 188
WS GV YV+L G PF + + I ++ D+ +S + IS +
Sbjct: 202 WSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIR--ISPECCHLISRIF 259
Query: 189 VKRKEKRLTAKQCLSHLWI 207
V R++ + +H W
Sbjct: 260 VADPATRISIPEIKTHSWF 278
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 103 bits (258), Expect = 3e-26
Identities = 46/140 (32%), Positives = 66/140 (47%), Gaps = 12/140 (8%)
Query: 61 GLGH-HSLVTV--DPKILPENIMCVSRTSHHIKIIDFGLA-QKINPDHPPRVLFGTPEFI 116
L + HS V D K EN+M HIKI DFGL + I+ + GTPE++
Sbjct: 117 ALEYLHSRDVVYRDIK--LENLMLDK--DGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172
Query: 117 PPEIINYEPIGIESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEAL 176
PE++ G D W +GV+ Y ++ G PF ++ F I E F L
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----L 228
Query: 177 SEDAKDFISSLLVKRKEKRL 196
S +AK ++ LL K ++RL
Sbjct: 229 SPEAKSLLAGLLKKDPKQRL 248
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 103 bits (258), Expect = 3e-26
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 12/140 (8%)
Query: 61 GLGH-HSLVTV--DPKILPENIMCVSRTSHHIKIIDFGLA-QKINPDHPPRVLFGTPEFI 116
L H + D K +N++ H K+ DFG+ + I GTP++I
Sbjct: 136 ALMFLHDKGIIYRDLK--LDNVLLDHEG--HCKLADFGMCKEGICNGVTTATFCGTPDYI 191
Query: 117 PPEIINYEPIGIESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEAL 176
PEI+ G D W++GV+ Y +L G +PF EN+ + F I E + L
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTW----L 247
Query: 177 SEDAKDFISSLLVKRKEKRL 196
EDA + S + K RL
Sbjct: 248 HEDATGILKSFMTKNPTMRL 267
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 104 bits (260), Expect = 4e-26
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPR--VLFGTPEFIPPEII-------NYEPI 126
P+NI+ HI++ DFG K+ D R V GTP+++ PEI+
Sbjct: 190 PDNILLDR--CGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSY 247
Query: 127 GIESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFE-ALSEDAKDFIS 185
G E D W++GV Y + G +PF ++ +ET+ I + + + E+A+DFI
Sbjct: 248 GPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQ 307
Query: 186 SLLVKRKEKRL 196
LL E RL
Sbjct: 308 RLLCPP-ETRL 317
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 102 bits (256), Expect = 4e-26
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 15/139 (10%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF---GTPEFIPPEIIN----YEPIGI 128
P N++ + +KI G+A+ ++P G+P F PPEI N + G
Sbjct: 137 PGNLLLTTG--GTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFS--GF 192
Query: 129 ESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLL 188
+ D+WS GV Y + +GL PF G+N + F NI + + + D + +L
Sbjct: 193 KVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGD----CGPPLSDLLKGML 248
Query: 189 VKRKEKRLTAKQCLSHLWI 207
KR + +Q H W
Sbjct: 249 EYEPAKRFSIRQIRQHSWF 267
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 102 bits (255), Expect = 5e-26
Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 15/154 (9%)
Query: 60 RGLGH-HSLVTV--DPKILPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFI 116
L H HS V D K P NI + K+ DFGL ++ V G P ++
Sbjct: 168 LALAHLHSQGLVHLDVK--PANIF-LGPRGR-CKLGDFGLLVELGTAGAGEVQEGDPRYM 223
Query: 117 PPEIINYEPIGIESDMWSIGVITYVLLSGLS-PFMGENDSETFANITRAEFDFDDEAFEA 175
PE++ G +D++S+G+ + + P GE + EF
Sbjct: 224 APELLQ-GSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEF------TAG 276
Query: 176 LSEDAKDFISSLLVKRKEKRLTAKQCLSHLWIAQ 209
LS + + + +L + R TA+ L+ + Q
Sbjct: 277 LSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 102 bits (257), Expect = 6e-26
Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 61 GLGH-HSLVTV--DPKILPENIMCVSRTSHHIKIIDFGLA-QKINPDHPPRVLFGTPEFI 116
GL S + D K +N+M S HIKI DFG+ + I + GTP++I
Sbjct: 133 GLFFLQSKGIIYRDLK--LDNVMLDSEG--HIKIADFGMCKENIWDGVTTKTFCGTPDYI 188
Query: 117 PPEIINYEPIGIESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEAL 176
PEII Y+P G D W+ GV+ Y +L+G +PF GE++ E F +I + +
Sbjct: 189 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----M 244
Query: 177 SEDAKDFISSLLVKRKEKRL 196
S++A L+ K KRL
Sbjct: 245 SKEAVAICKGLMTKHPGKRL 264
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 103 bits (259), Expect = 1e-25
Identities = 29/165 (17%), Positives = 62/165 (37%), Gaps = 21/165 (12%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWS 134
PENI+ KIID G A++++ GT +++ PE++ + + D WS
Sbjct: 149 PENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWS 208
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFE-------------------- 174
G + + ++G PF+ + R + + ++
Sbjct: 209 FGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSG 268
Query: 175 ALSEDAKDFISSLLVKRKEKRLTAKQCLSHLWIAQKDSSPGVNKI 219
L+ + ++ +L+ + +R T Q + DS + +
Sbjct: 269 ILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLKLL 313
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 102 bits (257), Expect = 1e-25
Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 11/129 (8%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPR--VLFGTPEFIPPEIINYEPI-----GI 128
P+NI+ + HI++ DFG K+ D + V GTP++I PEI+ G
Sbjct: 203 PDNILMDM--NGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGP 260
Query: 129 ESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFD-DEAFEALSEDAKDFISSL 187
E D WS+GV Y +L G +PF E+ ET+ I + F +SE+AKD I L
Sbjct: 261 ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRL 320
Query: 188 LVKRKEKRL 196
+ +E RL
Sbjct: 321 I-CSREHRL 328
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 101 bits (255), Expect = 1e-25
Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 14/144 (9%)
Query: 61 GLGH-HSLVTV--DPKILPENIMCVSRTSH-HIKIIDFGLA-QKINPDHPPRVLFGTPEF 115
LG+ HSL V D K PENI+ S HI + DFGL + I + GTPE+
Sbjct: 151 ALGYLHSLNIVYRDLK--PENILL---DSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEY 205
Query: 116 IPPEIINYEPIGIESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEA 175
+ PE+++ +P D W +G + Y +L GL PF N +E + NI
Sbjct: 206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPN---- 261
Query: 176 LSEDAKDFISSLLVKRKEKRLTAK 199
++ A+ + LL K + KRL AK
Sbjct: 262 ITNSARHLLEGLLQKDRTKRLGAK 285
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 100 bits (252), Expect = 2e-25
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEP-IGIESDMWS 134
PEN++ + ++KI DFGL+ + + + G+P + PE+IN + G E D+WS
Sbjct: 136 PENLLLDD--NLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWS 193
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
G++ YV+L G PF E F + + D LS A+ I ++V +
Sbjct: 194 CGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDF----LSPGAQSLIRRMIVADPMQ 249
Query: 195 RLTAKQCLSHLWI 207
R+T ++ W
Sbjct: 250 RITIQEIRRDPWF 262
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 99.6 bits (249), Expect = 2e-25
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 7/133 (5%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEP-IGIESDMWS 134
PEN++ + + KI DFGL+ ++ R G+P + PE+I+ G E D+WS
Sbjct: 139 PENVLLDAH--MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWS 196
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
GVI Y LL G PF E+ F I F + L+ + +L K
Sbjct: 197 CGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY----LNRSVATLLMHMLQVDPLK 252
Query: 195 RLTAKQCLSHLWI 207
R T K H W
Sbjct: 253 RATIKDIREHEWF 265
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 99.2 bits (248), Expect = 3e-25
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 7/133 (5%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEP-IGIESDMWS 134
PEN++ ++KI DFGL+ + + + G+P + PE+I+ + G E D+WS
Sbjct: 140 PENLLLDEH--LNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWS 197
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
GVI YV+L PF E+ F NI+ + LS A I +L+
Sbjct: 198 CGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKF----LSPGAAGLIKRMLIVNPLN 253
Query: 195 RLTAKQCLSHLWI 207
R++ + + W
Sbjct: 254 RISIHEIMQDDWF 266
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 102 bits (256), Expect = 3e-25
Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 61 GLGH-HSLVTV--DPKILPENIMCVSRTSHHIKIIDFGLA-QKINPDHPPRVLFGTPEFI 116
GL S + D K +N+M S HIKI DFG+ + I + GTP++I
Sbjct: 454 GLFFLQSKGIIYRDLK--LDNVMLDSEG--HIKIADFGMCKENIWDGVTTKTFCGTPDYI 509
Query: 117 PPEIINYEPIGIESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEAL 176
PEII Y+P G D W+ GV+ Y +L+G +PF GE++ E F +I + +
Sbjct: 510 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----M 565
Query: 177 SEDAKDFISSLLVKRKEKRL 196
S++A L+ K KRL
Sbjct: 566 SKEAVAICKGLMTKHPGKRL 585
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 98.5 bits (246), Expect = 6e-25
Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 10/135 (7%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSI 135
P NI V + +KI DFGL + D GT ++ PE I+ + G E D++++
Sbjct: 150 PSNIFLVD--TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYAL 207
Query: 136 GVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEKR 195
G+I LL S+ F ++ + + K + LL K+ E R
Sbjct: 208 GLILAELLHVCDTAF--ETSKFFTDLRDGIIS------DIFDKKEKTLLQKLLSKKPEDR 259
Query: 196 LTAKQCLSHLWIAQK 210
+ L L + +K
Sbjct: 260 PNTSEILRTLTVWKK 274
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 100 bits (250), Expect = 1e-24
Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
Query: 61 GLGH-HSLVTV---DPKILPENIMCVSRTSHHIKIIDFGLA-QKINPDHPPRVLFGTPEF 115
L + HS V D K EN+M HIKI DFGL + I + GTPE+
Sbjct: 260 ALDYLHSEKNVVYRDLK--LENLMLDK--DGHIKITDFGLCKEGIKDGATMKTFCGTPEY 315
Query: 116 IPPEIINYEPIGIESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEA 175
+ PE++ G D W +GV+ Y ++ G PF ++ + F I E F
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RT 371
Query: 176 LSEDAKDFISSLLVKRKEKRL 196
L +AK +S LL K ++RL
Sbjct: 372 LGPEAKSLLSGLLKKDPKQRL 392
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 100 bits (251), Expect = 1e-24
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 18/149 (12%)
Query: 61 GLGH-HSLVTV--DPKILPENIMCVSRTSH-HIKIIDFGLA-QKINPDHPPRVLFGTPEF 115
GL H H + D K PEN++ +++I D GLA + + GTP F
Sbjct: 301 GLEHLHQRNIIYRDLK--PENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGF 355
Query: 116 IPPEIINYEPIGIESDMWSIGVITYVLLSGLSPFMGENDS----ETFANITRAEFDFDDE 171
+ PE++ E D +++GV Y +++ PF + E + + D+
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK 415
Query: 172 AFEALSEDAKDFISSLLVKRKEKRLTAKQ 200
S +KDF +LL K EKRL +
Sbjct: 416 ----FSPASKDFCEALLQKDPEKRLGFRD 440
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 98.2 bits (245), Expect = 1e-24
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 14/140 (10%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEP-IGIESDMWS 134
ENI+ + +K+IDFG + D GT + PPE I Y G + +WS
Sbjct: 177 DENIL-IDLNRGELKLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 234
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
+G++ Y ++ G PF + + I R + F +S + + I L R
Sbjct: 235 LGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR----VSSECQHLIRWCLALRPSD 284
Query: 195 RLTAKQCLSHLWIAQKDSSP 214
R T ++ +H W+ Q P
Sbjct: 285 RPTFEEIQNHPWM-QDVLLP 303
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 97.8 bits (244), Expect = 2e-24
Identities = 33/206 (16%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 39 EMKAGTQPWVELSE----RLFESTERGLGH-HSLVTVDPKIL-----PENIMCVSRTSHH 88
E++ L+E L RGL H+ P NI+
Sbjct: 120 EIERLKDKGNFLTEDQILWLLLGICRGLEAIHA-----KGYAHRDLKPTNILLGD--EGQ 172
Query: 89 IKIIDFGLAQKINPDHPPRV----------LFGTPEFIPPEIIN---YEPIGIESDMWSI 135
++D G + T + PE+ + + I +D+WS+
Sbjct: 173 PVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSL 232
Query: 136 GVITYVLLSGLSPFMGENDS-ETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
G + Y ++ G P+ ++ A + + S ++S++ +
Sbjct: 233 GCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQ--SPRHSSALWQLLNSMMTVDPHQ 290
Query: 195 RLTAKQCLSHLWIAQKDSSPGVNKII 220
R LS L Q + I
Sbjct: 291 RPHIPLLLSQLEALQPPAPGQHTTQI 316
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 98.3 bits (245), Expect = 6e-24
Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 12/142 (8%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIIN---YEPIGIESDM 132
PEN++ + + KI DFGL+ ++ R G+P + PE+I+ Y G E D+
Sbjct: 144 PENVLLDA--HMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYA--GPEVDI 199
Query: 133 WSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRK 192
WS GVI Y LL G PF ++ F I F L+ + +L
Sbjct: 200 WSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQY----LNPSVISLLKHMLQVDP 255
Query: 193 EKRLTAKQCLSHLWIAQKDSSP 214
KR T K H W ++D
Sbjct: 256 MKRATIKDIREHEWF-KQDLPK 276
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 96.3 bits (240), Expect = 9e-24
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEP-IGIESDMWS 134
ENI+ IK+IDFG A + GT E+ PE++ P G E +MWS
Sbjct: 158 DENIVIAED--FTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWS 215
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
+GV Y L+ +PF A +S++ +S LL E+
Sbjct: 216 LGVTLYTLVFEENPF------CELEETVEAAIHPPYL----VSKELMSLVSGLLQPVPER 265
Query: 195 RLTAKQCLSHLWIAQKDSSPGVN 217
R T ++ ++ W+ Q +
Sbjct: 266 RTTLEKLVTDPWVTQPVNLADYT 288
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 95.7 bits (239), Expect = 1e-23
Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 8/121 (6%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSI 135
PENI+ HIKI DFG A K PD L GTP++I PE+++ +P D WS
Sbjct: 134 PENILLDKNG--HIKITDFGFA-KYVPDVT-YTLCGTPDYIAPEVVSTKPYNKSIDWWSF 189
Query: 136 GVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEKR 195
G++ Y +L+G +PF N +T+ I AE F +ED KD +S L+ + +R
Sbjct: 190 GILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPF----FNEDVKDLLSRLITRDLSQR 245
Query: 196 L 196
L
Sbjct: 246 L 246
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 97.3 bits (242), Expect = 2e-23
Identities = 38/144 (26%), Positives = 57/144 (39%), Gaps = 18/144 (12%)
Query: 61 GLGH-HSLVTV--DPKILPENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFI 116
GL H H+ V D K P NI+ H H++I D GLA P GT ++
Sbjct: 304 GLEHMHNRFVVYRDLK--PANILL---DEHGHVRISDLGLA-CDFSKKKPHASVGTHGYM 357
Query: 117 PPEIINY-EPIGIESDMWSIGVITYVLLSGLSPFMGEND---SETFANITRAEFDFDDEA 172
PE++ +D +S+G + + LL G SPF E + D
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS- 416
Query: 173 FEALSEDAKDFISSLLVKRKEKRL 196
S + + + LL + +RL
Sbjct: 417 ---FSPELRSLLEGLLQRDVNRRL 437
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 94.7 bits (236), Expect = 3e-23
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 13/133 (9%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEP-IGIESDMWS 134
ENI+ + K+IDFG + D P GT + PPE I+ + + +WS
Sbjct: 167 DENIL-IDLRRGCAKLIDFGSGALL-HDEPYTDFDGTRVYSPPEWISRHQYHALPATVWS 224
Query: 135 IGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
+G++ Y ++ G PF + + I AE F +S D I L +
Sbjct: 225 LGILLYDMVCGDIPFERDQE------ILEAELHFPAH----VSPDCCALIRRCLAPKPSS 274
Query: 195 RLTAKQCLSHLWI 207
R + ++ L W+
Sbjct: 275 RPSLEEILLDPWM 287
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 94.6 bits (236), Expect = 5e-23
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 21/149 (14%)
Query: 61 GLGH-HSLVTV--DPKILPENIMCVSRTSHHIKIIDFGLA-QKINPDHPPRVLFGTPEFI 116
L + H + D K +N++ S HIK+ D+G+ + + P GTP +I
Sbjct: 122 ALNYLHERGIIYRDLK--LDNVLLDSEG--HIKLTDYGMCKEGLRPGDTTSTFCGTPNYI 177
Query: 117 PPEIINYEPIGIESDMWSIGVITYVLLSGLSPFM---------GENDSETFANITRAEFD 167
PEI+ E G D W++GV+ + +++G SPF + F I +
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 237
Query: 168 FDDEAFEALSEDAKDFISSLLVKRKEKRL 196
LS A + S L K ++RL
Sbjct: 238 IPRS----LSVKAASVLKSFLNKDPKERL 262
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 94.7 bits (236), Expect = 5e-23
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSI 135
PEN++ + +I++ DFG A+++ L GTPE + PEII + D W++
Sbjct: 169 PENLLIDQQG--YIQVTDFGFAKRV--KGRTWTLCGTPEALAPEIILSKGYNKAVDWWAL 224
Query: 136 GVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEKR 195
GV+ Y + +G PF + + + I + F S D KD + +LL KR
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKR 280
Query: 196 L 196
Sbjct: 281 F 281
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 94.0 bits (234), Expect = 8e-23
Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 6/161 (3%)
Query: 74 ILPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF-GTPEFIPPEIINYEPIGIESDM 132
I +NI +++ DFG+A+ +N GTP ++ PEI +P +SD+
Sbjct: 151 IKSQNIFLTK--DGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDI 208
Query: 133 WSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRK 192
W++G + Y L + F + I F + S D + +S L +
Sbjct: 209 WALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHY---SYDLRSLVSQLFKRNP 265
Query: 193 EKRLTAKQCLSHLWIAQKDSSPGVNKIISTDKLKKYIYRRK 233
R + L +IA++ ++I+ + K +
Sbjct: 266 RDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFG 306
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 92.3 bits (230), Expect = 1e-22
Identities = 29/139 (20%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF---GTPEFIPPEIIN---YEPIGIE 129
PEN++ R ++KI DFGLA ++ R+L GT ++ PE++ +
Sbjct: 133 PENLLLDER--DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH--AEP 188
Query: 130 SDMWSIGVITYVLLSGLSPF-MGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLL 188
D+WS G++ +L+G P+ + + +++ + + ++ + + +L
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP--WKKIDSAPLALLHKIL 246
Query: 189 VKRKEKRLTAKQCLSHLWI 207
V+ R+T W
Sbjct: 247 VENPSARITIPDIKKDRWY 265
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 93.6 bits (233), Expect = 2e-22
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 21/149 (14%)
Query: 61 GLGH-HSLVTV--DPKILPENIMCVSRTSHHIKIIDFGLA-QKINPDHPPRVLFGTPEFI 116
L + H + D K +N++ S HIK+ D+G+ + + P GTP +I
Sbjct: 165 ALNYLHERGIIYRDLK--LDNVLLDSEG--HIKLTDYGMCKEGLRPGDTTSTFCGTPNYI 220
Query: 117 PPEIINYEPIGIESDMWSIGVITYVLLSGLSPFM---------GENDSETFANITRAEFD 167
PEI+ E G D W++GV+ + +++G SPF + F I +
Sbjct: 221 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 280
Query: 168 FDDEAFEALSEDAKDFISSLLVKRKEKRL 196
LS A + S L K ++RL
Sbjct: 281 IPRS----LSVKAASVLKSFLNKDPKERL 305
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 92.8 bits (231), Expect = 3e-22
Identities = 29/139 (20%), Positives = 51/139 (36%), Gaps = 15/139 (10%)
Query: 76 PENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPI---GIESD 131
P+NI+ H H+ I DF +A + + + GT ++ PE+ + D
Sbjct: 143 PDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVD 199
Query: 132 MWSIGVITYVLLSGLSPFMG---ENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLL 188
WS+GV Y LL G P+ + E + A S++ + LL
Sbjct: 200 WWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPS----AWSQEMVSLLKKLL 255
Query: 189 VKRKEKRL-TAKQCLSHLW 206
++R + +
Sbjct: 256 EPNPDQRFSQLSDVQNFPY 274
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 90.8 bits (226), Expect = 7e-22
Identities = 29/139 (20%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF---GTPEFIPPEIIN---YEPIGIE 129
PEN++ R ++KI DFGLA ++ R+L GT ++ PE++ +
Sbjct: 133 PENLLLDER--DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH--AEP 188
Query: 130 SDMWSIGVITYVLLSGLSPF-MGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLL 188
D+WS G++ +L+G P+ + + +++ + + ++ + + +L
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP--WKKIDSAPLALLHKIL 246
Query: 189 VKRKEKRLTAKQCLSHLWI 207
V+ R+T W
Sbjct: 247 VENPSARITIPDIKKDRWY 265
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 90.8 bits (226), Expect = 1e-21
Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 21/148 (14%)
Query: 61 GLGH-HSLVTV--DPKILPENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRV--LFGTPE 114
L H H L + D K ENI+ S+ H+ + DFGL+++ D R GT E
Sbjct: 171 ALEHLHKLGIIYRDIK--LENILL---DSNGHVVLTDFGLSKEFVADETERAYDFCGTIE 225
Query: 115 FIPPEIINYEPIGIES--DMWSIGVITYVLLSGLSPFMGEND----SETFANITRAEFDF 168
++ P+I+ G + D WS+GV+ Y LL+G SPF + + +E I ++E +
Sbjct: 226 YMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY 285
Query: 169 DDEAFEALSEDAKDFISSLLVKRKEKRL 196
E +S AKD I LL+K +KRL
Sbjct: 286 PQE----MSALAKDLIQRLLMKDPKKRL 309
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 87.0 bits (215), Expect = 3e-20
Identities = 25/156 (16%), Positives = 47/156 (30%), Gaps = 24/156 (15%)
Query: 65 HSLVTVDPKILPENIMCVSR---------TSHHIKIIDFGLAQKINPDHPPRVLF----G 111
H + I P+N + + S + +ID G + + P +F
Sbjct: 189 HDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMK-LFPKGTIFTAKCE 247
Query: 112 TPEFIPPEIINYEPIGIESDMWSIGVITYVLLSGLSPFMG-ENDSETFANITRAEFDFDD 170
T F E+++ +P + D + + Y +L G + E + R D
Sbjct: 248 TSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHLD- 306
Query: 171 EAFEALSEDAKDFISSLLVKRKEKRLTAKQCLSHLW 206
+F +L L + L
Sbjct: 307 --------MWNEFFHVMLNIPDCHHLPSLDLLRQKL 334
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 86.0 bits (213), Expect = 5e-20
Identities = 43/198 (21%), Positives = 70/198 (35%), Gaps = 37/198 (18%)
Query: 50 LSE----RLFESTERGLGH-HSLVTVDPKIL-----PENIMCVSRTSHHIKIIDFGLAQK 99
LS ++F T R + H H P I+ EN++ + IK+ DFG A
Sbjct: 133 LSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSN--QGTIKLCDFGSATT 187
Query: 100 INPDHPPRVL-------------FGTPEFIPPEIIN---YEPIGIESDMWSIGVITYVLL 143
I+ TP + PEII+ PIG + D+W++G I Y+L
Sbjct: 188 ISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLC 247
Query: 144 SGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQCLS 203
PF I ++ + I ++L E+RL+ + +
Sbjct: 248 FRQHPFEDGA----KLRIVNGKYSIPP--HDTQYTVFHSLIRAMLQVNPEERLSIAEVVH 301
Query: 204 HLWIAQKDSSPGVNKIIS 221
L + I+
Sbjct: 302 QLQEIAAARNVNPKSPIT 319
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 82.4 bits (204), Expect = 6e-19
Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 22/150 (14%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF-------------GTPEFIPPEIIN 122
P NI +K+ DFGL ++ D + + GT ++ PE I+
Sbjct: 146 PSNIFFTM--DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIH 203
Query: 123 YEPIGIESDMWSIGVITYVLLSGLSPFMGEND-SETFANITRAEFDFDDEAFEALSEDAK 181
+ D++S+G+I + L L PF + + T ++ +F F
Sbjct: 204 GNSYSHKVDIFSLGLILFEL---LYPFSTQMERVRTLTDVRNLKF---PPLFTQKYPCEY 257
Query: 182 DFISSLLVKRKEKRLTAKQCLSHLWIAQKD 211
+ +L +R A + + D
Sbjct: 258 VMVQDMLSPSPMERPEAINIIENAVFEDLD 287
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 81.5 bits (201), Expect = 3e-18
Identities = 27/145 (18%), Positives = 50/145 (34%), Gaps = 20/145 (13%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF-------------GTPEFIPPEIIN 122
P NI +K+ DFGL ++ D + + GT ++ PE I+
Sbjct: 192 PSNIFFTM--DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIH 249
Query: 123 YEPIGIESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKD 182
+ D++S+G+I + LL S M ++ +F F
Sbjct: 250 GNNYSHKVDIFSLGLILFELLYSFSTQM--ERVRIITDVRNLKFPLL---FTQKYPQEHM 304
Query: 183 FISSLLVKRKEKRLTAKQCLSHLWI 207
+ +L +R A + +
Sbjct: 305 MVQDMLSPSPTERPEATDIIENAIF 329
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 79.3 bits (196), Expect = 1e-17
Identities = 31/144 (21%), Positives = 60/144 (41%), Gaps = 7/144 (4%)
Query: 74 ILPENIMCVSRTSHHIKIIDFGLAQKINPDHP-PRVLFGTPEFIPPEIINYEPIGIESDM 132
I P N+ ++ + +K+ D GL + + L GTP ++ PE I+ +SD+
Sbjct: 162 IKPANVF-ITA-TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDI 219
Query: 133 WSIGVITYVLLSGLSPFMGENDS--ETFANITRAEFDFDDEAFEALSEDAKDFISSLLVK 190
WS+G + Y + + SPF G+ + I + D+ + SE+ + ++ +
Sbjct: 220 WSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC--DYPPLPSDHYSEELRQLVNMCINP 277
Query: 191 RKEKRLTAKQCLSHLWIAQKDSSP 214
EKR ++
Sbjct: 278 DPEKRPDVTYVYDVAKRMHACTAS 301
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 76.6 bits (189), Expect = 9e-17
Identities = 29/134 (21%), Positives = 61/134 (45%), Gaps = 6/134 (4%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGV 137
NI ++ + +KI D GLA V+ GTPEF+ PE+ E D+++ G+
Sbjct: 161 NIF-ITGPTGSVKIGDLGLATLKRASFAKAVI-GTPEFMAPEMYE-EKYDESVDVYAFGM 217
Query: 138 ITYVLLSGLSPFMG-ENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEKRL 196
+ + P+ +N ++ + +T + + + K+ I + + K++R
Sbjct: 218 CMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFD--KVAIPEVKEIIEGCIRQNKDERY 275
Query: 197 TAKQCLSHLWIAQK 210
+ K L+H + ++
Sbjct: 276 SIKDLLNHAFFQEE 289
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 70.4 bits (173), Expect = 1e-14
Identities = 18/121 (14%), Positives = 46/121 (38%), Gaps = 10/121 (8%)
Query: 90 KIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYE-PIGIESDMWSIGVITYVLLSGLSP 148
KI D G +I+ P+V G F+ E++ ++D++++ +
Sbjct: 174 KIGDLGHVTRISS---PQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPL 230
Query: 149 FMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQCLSHLWIA 208
+ + + I + + LS++ + + ++ E+R +A + H +
Sbjct: 231 P---RNGDQWHEIRQGRLP---RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLL 284
Query: 209 Q 209
Sbjct: 285 S 285
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 71.3 bits (175), Expect = 1e-14
Identities = 40/211 (18%), Positives = 63/211 (29%), Gaps = 71/211 (33%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPP-------RVLFGTPEFIPPEIINYEPIGI 128
PENI+ + IK+IDFG + + R PE+I G+
Sbjct: 228 PENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYR---------APEVILGARYGM 278
Query: 129 ESDMWSIGVITYVLLSGLSPFMGENDSETFANI---------------TRAEFDFDDEAF 173
DMWS+G I LL+G GE++ + A + RA+ + +
Sbjct: 279 PIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGY 338
Query: 174 EALSEDAK----------------------------------------DFISSLLVKRKE 193
DF+ L
Sbjct: 339 PRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPA 398
Query: 194 KRLTAKQCLSHLWIAQKDSSPGVNKIISTDK 224
R+T Q L H W+ ++ P + S +
Sbjct: 399 VRMTPGQALRHPWLRRRLPKPPTGEKTSVKR 429
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 71.0 bits (174), Expect = 2e-14
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 60 RGLGH-HS--LVTVDPKILPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFI 116
L + HS LV D K PENIM T +K+ID G +IN L+GTP F
Sbjct: 193 PALSYLHSIGLVYNDLK--PENIM---LTEEQLKLIDLGAVSRINSFGY---LYGTPGFQ 244
Query: 117 PPEIINYEPIGIESDMWSIGVITYVLLSGLSPFMGE 152
PEI+ P + +D++++G L L G
Sbjct: 245 APEIVRTGPT-VATDIYTVGRTLAALTLDLPTRNGR 279
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 70.2 bits (172), Expect = 3e-14
Identities = 27/148 (18%), Positives = 53/148 (35%), Gaps = 10/148 (6%)
Query: 74 ILPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF------GTPEFIPPEIINYEPIG 127
+ +N++ +S + DFG A + PD + L GT + PE++ +P
Sbjct: 176 VKADNVL-LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 234
Query: 128 IESDMWSIGVITYV-LLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISS 186
+ D+WS + +L+G P+ I + + + I
Sbjct: 235 AKVDIWSSC-CMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIP-PSCAPLTAQAIQE 292
Query: 187 LLVKRKEKRLTAKQCLSHLWIAQKDSSP 214
L K R +A + + A ++
Sbjct: 293 GLRKEPVHRASAMELRRKVGKALQEVGG 320
Score = 26.2 bits (58), Expect = 9.6
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 9/31 (29%)
Query: 22 WSSPPYDGGCMITGYVVEMKAGTQPWVELSE 52
WSS CM ++ M G PW +
Sbjct: 240 WSS-----CCM----MLHMLNGCHPWTQYFR 261
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 68.1 bits (167), Expect = 9e-14
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 17/149 (11%)
Query: 74 ILPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF-GTPEFIPPEIINYEPIG--IES 130
I +N++ ++ S +KI DFG ++++ +P F GT +++ PEII+ P G +
Sbjct: 148 IKGDNVL-INTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAA 206
Query: 131 DMWSIGVITYV-LLSGLSPFMGENDSETFANITRAEF-----DFDDEAFEALSEDAKDFI 184
D+WS+G T + + +G PF E A F E E++S +AK FI
Sbjct: 207 DIWSLG-CTIIEMATGKPPF-----YE-LGEPQAAMFKVGMFKVHPEIPESMSAEAKAFI 259
Query: 185 SSLLVKRKEKRLTAKQCLSHLWIAQKDSS 213
+KR A L ++
Sbjct: 260 LKCFEPDPDKRACANDLLVDEFLKVSSKK 288
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 112
Score = 61.2 bits (149), Expect = 2e-12
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSERLFESTE 59
DPP + ++ R +V + W+ P Y GG IT Y+VE + W++ + E
Sbjct: 11 IDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENE 69
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain,
SLOW- type protein, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 110
Score = 60.8 bits (148), Expect = 2e-12
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSERLFESTE 59
PP+ S T+V + W P + G + GYV+E GT+ W+ ++ L + T+
Sbjct: 8 TSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKTK 66
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 63.9 bits (156), Expect = 3e-12
Identities = 32/124 (25%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLF-GTPEFIPPEIINYEPIGIESDMWSIGVITYVLLSGL 146
+K+ DFG +I+ D P R GTP ++ PE+I+ E D+WS+G++ ++ G
Sbjct: 179 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
Query: 147 SPFMGENDSETFANITRAEF-DFDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQCLSHL 205
P+ ++ + + + + +S +DF+ +LV+ ++R TA++ L H
Sbjct: 239 PPYFSDSPVQAMKRLRDSPPPKLKNS--HKVSPVLRDFLERMLVRDPQERATAQELLDHP 296
Query: 206 WIAQ 209
++ Q
Sbjct: 297 FLLQ 300
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 63.5 bits (155), Expect = 4e-12
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 20/161 (12%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLF-GTPEFIPPEIINYEPIGIESDMWSIGVITYVLLSGL 146
H K+ DFG+A ++ R GTP ++ PE+I +D+WS+G+ + G
Sbjct: 163 HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
Query: 147 SPFMGENDSETFANITRAEF--------DFDDEAFEALSEDAKDFISSLLVKRKEKRLTA 198
P+ + RA F F E S++ DF+ LVK E+R TA
Sbjct: 223 PPYADIH-------PMRAIFMIPTNPPPTFRKP--ELWSDNFTDFVKQCLVKSPEQRATA 273
Query: 199 KQCLSHLWIAQKDSSPGVNKIISTDKLKKYIYRRKWQFSRH 239
Q L H ++ + +I ++ +R+ R
Sbjct: 274 TQLLQHPFVRSAKGVSILRDLI--NEAMDVKLKRQESQQRE 312
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain,
structural genomics., NPPSFA; NMR {Homo sapiens}
Length = 120
Score = 60.1 bits (146), Expect = 4e-12
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSERLFEST 58
P PP +V +TW+ P DG ITGY ++ + W + E ++
Sbjct: 17 RPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHRTS 75
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin
type III domain containing protein, cytoskeleton,
muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Length = 111
Score = 59.7 bits (145), Expect = 6e-12
Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSERLFESTE 59
P T+ + W P G I GY+VE G++ WV ++ E
Sbjct: 9 TSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCG 67
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 63.2 bits (154), Expect = 7e-12
Identities = 34/183 (18%), Positives = 60/183 (32%), Gaps = 50/183 (27%)
Query: 76 PENIM----CVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESD 131
PEN++ IKI D G A + + + T E+ PE++ P G +D
Sbjct: 160 PENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSI--QTREYRSPEVLLGAPWGCGAD 217
Query: 132 MWSIGVITYVLLSGLSPFMGENDSETFANI---------------------TRAEFDFDD 170
+WS + + L++G F + + F+
Sbjct: 218 IWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNS 277
Query: 171 --------------------EAFEALSEDAK---DFISSLLVKRKEKRLTAKQCLSHLWI 207
E ++ ++AK DF+S +L KR A ++H W+
Sbjct: 278 RGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337
Query: 208 AQK 210
Sbjct: 338 KDT 340
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 62.3 bits (152), Expect = 1e-11
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLF-GTPEFIPPEIINYEPIGIESDMWSIGVITYVLLSGL 146
+K+ DFG +I P+ R GTP ++ PE++ + G + D+WS+G++ ++ G
Sbjct: 154 SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
Query: 147 SPFMGENDSETFANITRAEF-DFDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQCLSHL 205
P++ EN I + + E LS +DF++ L EKR +AK+ L H
Sbjct: 214 PPYLNENPLRALYLIATNGTPELQNP--EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQ 271
Query: 206 WIAQ 209
++
Sbjct: 272 FLKI 275
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 59.9 bits (146), Expect = 6e-11
Identities = 38/165 (23%), Positives = 59/165 (35%), Gaps = 45/165 (27%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFI-----PPEII----NYEPI 126
PENI+ + IK+ DFG A+ + P E PE++ Y P
Sbjct: 130 PENILITKHS--VIKLCDFGFARLLTG--PSDYY--DDEVATRWYRSPELLVGDTQYGP- 182
Query: 127 GIESDMWSIGVITYVLLSGLSPFMGENDSETFANITRA-------------------EFD 167
+ D+W+IG + LLSG+ + G++D + I +
Sbjct: 183 PV--DVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK 240
Query: 168 FDD--------EAFEALSEDAKDFISSLLVKRKEKRLTAKQCLSH 204
D F +S A + L +RLT +Q L H
Sbjct: 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 60.1 bits (146), Expect = 7e-11
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 16/95 (16%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPP-------RVLFGTPEFIPPEIINYEPIGI 128
PENI+ + IKI+DFG + ++ R PE++ P +
Sbjct: 187 PENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYR---------SPEVLLGMPYDL 237
Query: 129 ESDMWSIGVITYVLLSGLSPFMGENDSETFANITR 163
DMWS+G I + +G F G N+ + I
Sbjct: 238 AIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 272
Score = 33.1 bits (76), Expect = 0.066
Identities = 7/30 (23%), Positives = 12/30 (40%)
Query: 181 KDFISSLLVKRKEKRLTAKQCLSHLWIAQK 210
KD I +L + R+ L H + +
Sbjct: 350 KDLILRMLDYDPKTRIQPYYALQHSFFKKT 379
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 59.7 bits (145), Expect = 8e-11
Identities = 34/153 (22%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLF-GTPEFIPPEIINYEPIGIES-----DMWSIGVITYV 141
+K++DFG++ +++ R F GTP ++ PE+I + + D+WS+G+
Sbjct: 167 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE 226
Query: 142 LLSGLSPFMGENDSETFANITRAEF-DFDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQ 200
+ G P + I R + + S+ + FI S LVK +R +Q
Sbjct: 227 MAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQRPATEQ 283
Query: 201 CLSHLWIAQKDSSPGVNKIISTDKLKKYIYRRK 233
+ H +I + + V + D + + +R
Sbjct: 284 LMKHPFIRDQPNERQVRIQL-KDHIDRTKKKRG 315
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 59.6 bits (145), Expect = 9e-11
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLF-GTPEFIPPEIINYEPIGIESDMWSIGVITYVLLSGL 146
+K+ DFG+A ++ R F GTP ++ PE+I ++D+WS+G+ L G
Sbjct: 157 EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216
Query: 147 SPFMGENDSETFANITRAE---FDFDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQCLS 203
P + + I + + S+ K+F+ + L K R TAK+ L
Sbjct: 217 PPHSELHPMKVLFLIPKNNPPTLE------GNYSKPLKEFVEACLNKEPSFRPTAKELLK 270
Query: 204 HLWIAQK 210
H +I +
Sbjct: 271 HKFILRN 277
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 59.3 bits (144), Expect = 1e-10
Identities = 33/154 (21%), Positives = 62/154 (40%), Gaps = 23/154 (14%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLF-GTPEFIPPEIINYEPI-----GIESDMWSIGVITYV 141
I++ DFG++ K R F GTP ++ PE++ E + ++D+WS+G+
Sbjct: 155 DIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIE 214
Query: 142 LLSGLSPFMGENDSETFANITRAEF--------DFDDEAFEALSEDAKDFISSLLVKRKE 193
+ P N R S + +DF+ L K E
Sbjct: 215 MAQIEPPHHELN-------PMRVLLKIAKSDPPTLLTP--SKWSVEFRDFLKIALDKNPE 265
Query: 194 KRLTAKQCLSHLWIAQKDSSPGVNKIISTDKLKK 227
R +A Q L H +++ S+ + ++++ K +
Sbjct: 266 TRPSAAQLLEHPFVSSITSNKALRELVAEAKAEV 299
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 59.6 bits (145), Expect = 1e-10
Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 36/164 (21%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEII-NYEPIGIESDMWS 134
P N+M + +++ID+GLA+ +P V + F PE++ +Y+ DMWS
Sbjct: 158 PHNVM-IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 216
Query: 135 IGVITYVLLSGLSPF----------------MGENDSETFANITRAEFD----------- 167
+G + ++ PF +G D + + E D
Sbjct: 217 LGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHS 276
Query: 168 -------FDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQCLSH 204
E +S +A DF+ LL + RLTA++ + H
Sbjct: 277 RKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 59.5 bits (145), Expect = 1e-10
Identities = 31/154 (20%), Positives = 56/154 (36%), Gaps = 42/154 (27%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLFGTPEFI-----PPEII----NYEPIGIESDMWSIGVI 138
+K+ DFGLA+ P R T E + P+++ Y + D+WSIG I
Sbjct: 157 ALKLADFGLARAFGI--PVRSY--THEVVTLWYRAPDVLMGSKKYST-SV--DIWSIGCI 209
Query: 139 TYVLLSGLSPFMGENDSETFANITRA-------------------EFDFDD-------EA 172
+++G F G D + I + F
Sbjct: 210 FAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSI 269
Query: 173 FEALSEDAKDFISSLLVKRKEKRLTAKQCLSHLW 206
++ D +S++L KR++A+ ++H +
Sbjct: 270 IPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
>2crz_A Fibronectin type-III domain containing protein 3A; structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 110
Score = 55.8 bits (135), Expect = 1e-10
Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 2 PDPPSGAIGVSNNR-TSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSE 52
P P + + + W P DGG I+ Y VEM E+ +
Sbjct: 9 PGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQ 61
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 58.8 bits (143), Expect = 2e-10
Identities = 33/165 (20%), Positives = 53/165 (32%), Gaps = 45/165 (27%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFI-----PPEII----NYEPI 126
PENI+ +K+ DFG A+ + P V E PE++ Y
Sbjct: 152 PENILVSQSG--VVKLCDFGFARTLAA--PGEVY--DDEVATRWYRAPELLVGDVKYGK- 204
Query: 127 GIESDMWSIGVITYVLLSGLSPFMGENDSETFANITRA-------------------EFD 167
+ D+W+IG + + G F G++D + +I
Sbjct: 205 AV--DVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR 262
Query: 168 FDD--------EAFEALSEDAKDFISSLLVKRKEKRLTAKQCLSH 204
+ + LSE D L +KR + L H
Sbjct: 263 LPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307
>2crm_A Fibronectin type-III domain containing protein 3A; structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 120
Score = 55.9 bits (135), Expect = 2e-10
Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Query: 2 PDPPSGAIGVSN-NRTSVVITWSSPPYDGGCMITGYVVEMKAGTQ--PWVELSE 52
P P + S ITW P +GG I YVVEM G+ W +
Sbjct: 18 PGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYS 71
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 58.5 bits (142), Expect = 2e-10
Identities = 34/203 (16%), Positives = 58/203 (28%), Gaps = 73/203 (35%)
Query: 76 PENIMCVSRTSHH-----------------IKIIDFGLAQKINPDHPP-------RVLFG 111
PENI+ V+ I++ DFG A + H R
Sbjct: 151 PENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYR---- 206
Query: 112 TPEFIPPEIINYEPIGIESDMWSIGVITYVLLSGLSPFMGENDSETFANI---------- 161
PPE+I D+WSIG I + G + F + E +
Sbjct: 207 -----PPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSH 261
Query: 162 -----TRAEFDFDDEA-FEALSEDAK------------------------DFISSLLVKR 191
+ ++ + ++ S D + D + +L
Sbjct: 262 MIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFD 321
Query: 192 KEKRLTAKQCLSHLWIAQKDSSP 214
+R+T + L H + A
Sbjct: 322 PAQRITLAEALLHPFFAGLTPEE 344
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 58.4 bits (142), Expect = 3e-10
Identities = 38/162 (23%), Positives = 58/162 (35%), Gaps = 42/162 (25%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLFGTPEFI-----PPEII----NYEPIGIESDMWSIGVI 138
+KI DFGLA+ P R T E I PPEI+ +Y D+WSI I
Sbjct: 175 VLKIGDFGLARAFGI--PIRQF--THEIITLWYRPPEILLGSRHY---STSVDIWSIACI 227
Query: 139 TYVLLSGLSPFMGENDSETFANITR--------------------AEF------DFDDEA 172
+L F G+++ + I F
Sbjct: 228 WAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVL 287
Query: 173 FEALSEDAKDFISSLLVKRKEKRLTAKQCLSHLWIAQKDSSP 214
L ++ D ++++L KR++AK L H + + D P
Sbjct: 288 GALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDFDP 329
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 58.0 bits (141), Expect = 3e-10
Identities = 29/158 (18%), Positives = 55/158 (34%), Gaps = 39/158 (24%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLFGTPEFI-----PPEII---NYEPIGIESDMWSIGVIT 139
+K+ DFGLA+ + + TP + PE++ Y + DMWS+G I
Sbjct: 158 TVKLADFGLARIY--SYQMAL---TPVVVTLWYRAPEVLLQSTYAT-PV--DMWSVGCIF 209
Query: 140 YVLLSGLSPFMGENDSETFANITRA----------------EFDFDD-------EAFEAL 176
+ F G ++++ I F +
Sbjct: 210 AEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEM 269
Query: 177 SEDAKDFISSLLVKRKEKRLTAKQCLSHLWIAQKDSSP 214
E + +L KR++A + L H ++ + + +P
Sbjct: 270 EESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 307
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 58.0 bits (141), Expect = 3e-10
Identities = 39/193 (20%), Positives = 64/193 (33%), Gaps = 48/193 (24%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLFGTPEFI-----PPEII----NYEPIGIESDMWSIGVI 138
+K+ DFGLA+ + P + E + PP+I+ +Y I DMW +G I
Sbjct: 138 ELKLADFGLARAKSI--PTKTY--DNEVVTLWYRPPDILLGSTDYST-QI--DMWGVGCI 190
Query: 139 TYVLLSGLSPFMGENDSETFANITRA-------------------EFDFDD-------EA 172
Y + +G F G E I R +++
Sbjct: 191 FYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSH 250
Query: 173 FEALSEDAKDFISSLLVKRKEKRLTAKQCLSHLWIAQKDSS----PGVNKIISTD--KLK 226
L D D ++ LL R++A+ + H + P I + +L+
Sbjct: 251 APRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLPDTTSIFALKEIQLQ 310
Query: 227 KYIYRRKWQFSRH 239
K R H
Sbjct: 311 KEASLRSAHHHHH 323
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold,
fibronectin type III, structural genomics; NMR {Homo
sapiens} SCOP: b.1.2.1
Length = 117
Score = 55.1 bits (133), Expect = 3e-10
Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEM--KAGTQPWVELSERLFEST 58
+P PPS + SV ++W P G + Y++E ++ + W ++ + +
Sbjct: 15 LPGPPSKPQVTDVTKNSVTLSWQ-PGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTL 73
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III
repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP:
b.1.2.1
Length = 105
Score = 54.7 bits (132), Expect = 3e-10
Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSERLFEST 58
P P V ++ + + P GG I Y E + G + W E++
Sbjct: 6 TPSSP-SIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEAS 63
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 57.6 bits (140), Expect = 4e-10
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 74 ILPENIMCVSRTSHHIKIIDFGLAQKINPDH--PPRVLFGTPEFIPPEIINYEPIGIESD 131
I P+NI+ + +KI DFG+A+ ++ + GT ++ PE E +D
Sbjct: 137 IKPQNIL-IDSN-KTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTD 194
Query: 132 MWSIGVITYVLLSGLSPFMGEN 153
++SIG++ Y +L G PF GE
Sbjct: 195 IYSIGIVLYEMLVGEPPFNGET 216
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 57.5 bits (140), Expect = 4e-10
Identities = 36/153 (23%), Positives = 60/153 (39%), Gaps = 41/153 (26%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLFGTPEFI-----PPEII----NYEPIGIESDMWSIGVI 138
IK+ DFGLA+ P R T E + PEI+ Y + D+WS+G I
Sbjct: 141 AIKLADFGLARAFGV--PVRTY--THEVVTLWYRAPEILLGAKYYST-AV--DIWSLGCI 193
Query: 139 TYVLLSGLSPFMGENDSETFANITRA------------------EFDFDD-------EAF 173
+++ + F G+++ + I R + F +
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
Query: 174 EALSEDAKDFISSLLVKRKEKRLTAKQCLSHLW 206
L ED + +S +L KR++AK L+H +
Sbjct: 254 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 57.6 bits (140), Expect = 5e-10
Identities = 37/158 (23%), Positives = 53/158 (33%), Gaps = 46/158 (29%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLFGTPEFI-----PPEII----NYEPIGIESDMWSIGVI 138
+K+ DFGLA+ P + E + P+++ Y I D+WS G I
Sbjct: 146 QLKLGDFGLARAFGI--PVNTF--SSEVVTLWYRAPDVLMGSRTYST-SI--DIWSCGCI 198
Query: 139 TYVLLSGLSPFMGENDSETFANITR--------------------AEF----------DF 168
+++G F G ND E I
Sbjct: 199 LAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVL 258
Query: 169 DDEAFEALSEDAKDFISSLLVKRKEKRLTAKQCLSHLW 206
E L + DF+ LL + RL+AKQ L H W
Sbjct: 259 QPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 57.3 bits (139), Expect = 6e-10
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPP----RVLFGTPEFIPPEIINYEPIGIESD 131
P NIM +S T + +K++DFG+A+ I + GT +++ PE + + SD
Sbjct: 144 PANIM-ISAT-NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 132 MWSIGVITYVLLSGLSPFMGEN 153
++S+G + Y +L+G PF G++
Sbjct: 202 VYSLGCVLYEVLTGEPPFTGDS 223
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 56.8 bits (138), Expect = 7e-10
Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 41/153 (26%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLFGTPEFI-----PPEII----NYEPIGIESDMWSIGVI 138
+KI DFGLA+ P R T E + P+++ Y I D+WS+G I
Sbjct: 138 ELKIADFGLARAFGI--PVRKY--THEIVTLWYRAPDVLMGSKKYST-TI--DIWSVGCI 190
Query: 139 TYVLLSGLSPFMGENDSETFANITRA------------------EFDFD-------DEAF 173
+++G F G ++++ I R + +F +
Sbjct: 191 FAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL 250
Query: 174 EALSEDAKDFISSLLVKRKEKRLTAKQCLSHLW 206
+ L E D +S +L +R+TAKQ L H +
Sbjct: 251 KGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated
oncogenes (CDON)binding...; fibronectin type III, FN3;
NMR {Mus musculus} SCOP: b.1.2.1
Length = 121
Score = 54.3 bits (131), Expect = 7e-10
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK--AGTQPWVELSERL 54
P+ P + + TSV +TW P +GG I + VE K W+ + +
Sbjct: 18 PEAPDRPTISTASETSVYVTWI-PRGNGGFPIQSFRVEYKKLKKVGDWILATSAI 71
>1x3d_A Fibronectin type-III domain containing protein 3A; structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 118
Score = 54.3 bits (131), Expect = 7e-10
Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSERLFESTE 59
PD P+ + + S+ + W P D G I +V+E G + +
Sbjct: 18 PDIPNPPRIANRTKNSLTLQWK-APSDNGSKIQNFVLEWDEGKGNGEFCQCYMGSQKQ 74
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural
protein; 1.65A {Homo sapiens}
Length = 197
Score = 55.8 bits (135), Expect = 8e-10
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSE 52
P PP + R SV ++W P +DGG I GY+VEM+ G+ W +
Sbjct: 103 PLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCAT 154
Score = 55.0 bits (133), Expect = 1e-09
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELS 51
P PP +TSV +TW P DGG I Y+VE + + + + ++
Sbjct: 5 TPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVA 56
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 56.9 bits (138), Expect = 8e-10
Identities = 43/200 (21%), Positives = 76/200 (38%), Gaps = 53/200 (26%)
Query: 76 PENIM----CVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEII-NYEPIGIES 130
P N+ C +KI+DFGLA++ + + V T + PE+I N+
Sbjct: 156 PGNLAVNEDC------ELKILDFGLARQADSEMTGYV--VTRWYRAPEVILNWMRYTQTV 207
Query: 131 DMWSIGVITYVLLSGLSPFMGEN---------------DSETFANIT------------- 162
D+WS+G I +++G + F G + +E +
Sbjct: 208 DIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPE 267
Query: 163 RAEFDFDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQCLSHLWIAQ---KDSSPGVNKI 219
+ DF S A + + +LV E+R+TA + L+H + + P V K
Sbjct: 268 LEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQVQKY 326
Query: 220 --------ISTDKLKKYIYR 231
+ D+ K+ Y+
Sbjct: 327 DDSFDDVDRTLDEWKRVTYK 346
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 56.8 bits (138), Expect = 9e-10
Identities = 32/154 (20%), Positives = 55/154 (35%), Gaps = 42/154 (27%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLFGTPEFI-----PPEII----NYEPIGIESDMWSIGVI 138
+K+ +FGLA+ P R + E + PP+++ Y DMWS G I
Sbjct: 139 ELKLANFGLARAFGI--PVRCY--SAEVVTLWYRPPDVLFGAKLY---STSIDMWSAGCI 191
Query: 139 TYVLLSGLSP-FMGENDSETFANITRA----------EF----DFDD-----------EA 172
L + P F G + + I R D+
Sbjct: 192 FAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNV 251
Query: 173 FEALSEDAKDFISSLLVKRKEKRLTAKQCLSHLW 206
L+ +D + +LL +R++A++ L H +
Sbjct: 252 VPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 57.0 bits (138), Expect = 1e-09
Identities = 45/188 (23%), Positives = 65/188 (34%), Gaps = 60/188 (31%)
Query: 60 RGLGH-HSLVTVDPKIL-----PENIMCVSRTSHHIKIIDFGLAQKINPDHP-------- 105
R L + HS+ I P+N+ + S +K+IDFG A+ + P
Sbjct: 152 RSLAYIHSI-----GICHRDIKPQNL-LLDPPSGVLKLIDFGSAKILIAGEPNVSYICSR 205
Query: 106 ----PRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVLLSGLSPFMGENDSETFANI 161
P ++FG + I D+WS G + L+ G F GE+ + I
Sbjct: 206 YYRAPELIFGATNYTTN-I----------DIWSTGCVMAELMQGQPLFPGESGIDQLVEI 254
Query: 162 TR-----------------AEFDFD-------DEAFEA-LSEDAKDFISSLLVKRKEKRL 196
+ E F + F DA D IS LL RL
Sbjct: 255 IKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARL 314
Query: 197 TAKQCLSH 204
TA + L H
Sbjct: 315 TAIEALCH 322
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 56.2 bits (136), Expect = 1e-09
Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 9/126 (7%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIG----IESDMWSIGVITYVLL 143
+K+ DFG++ + + G ++ PE IN E ++SD+WS+G+ L
Sbjct: 192 QVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA 251
Query: 144 SGLSPFMG-ENDSETFANITRAE-FDFDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQC 201
P+ + + + F S + DF S L K ++R T +
Sbjct: 252 ILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF---SAEFVDFTSQCLKKNSKERPTYPEL 308
Query: 202 LSHLWI 207
+ H +
Sbjct: 309 MQHPFF 314
>1x5x_A Fibronectin type-III domain containing protein 3A; structural
genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 109
Score = 53.1 bits (128), Expect = 2e-09
Identities = 9/53 (16%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSER 53
P P+ + T + + WS P Y++EM+ + +
Sbjct: 8 PSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD 60
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Length = 305
Score = 55.9 bits (135), Expect = 2e-09
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSE 52
PDPP G +R SV +TW+ P DGG IT Y+VE + W+ + +
Sbjct: 199 PDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQ 250
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor;
2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A
1lwr_A
Length = 209
Score = 54.8 bits (132), Expect = 2e-09
Identities = 12/58 (20%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSERLFESTE 59
P P + + S+ + DGG I Y+V +A + W S
Sbjct: 110 PSAPKLEGQMGEDGNSIKVNLI-KQDDGGSPIRHYLVRYRALSSEWKPEIRLPSGSDH 166
Score = 51.4 bits (123), Expect = 3e-08
Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSERLFEST 58
P PS V ++ + + P GG I Y E + G + W E++
Sbjct: 9 PSSPSIDQ-VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEAS 65
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 55.8 bits (135), Expect = 2e-09
Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 50/168 (29%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFI------PPEII----NY-E 124
P N+ V+ +K+ DFG A+K++P P +I PE+I +Y
Sbjct: 159 PHNV-LVNEADGTLKLCDFGSAKKLSPSEP------NVAYICSRYYRAPELIFGNQHYTT 211
Query: 125 PIGIESDMWSIGVITYVLLSGLSPFMGEN---------------DSETFANIT--RAEFD 167
+ D+WS+G I ++ G F G+N E + + D
Sbjct: 212 AV----DIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVD 267
Query: 168 FDD-----------EAFEALSEDAKDFISSLLVKRKEKRLTAKQCLSH 204
+ + +++A D +S+LL E+R+ + L H
Sbjct: 268 LYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 55.3 bits (134), Expect = 2e-09
Identities = 31/150 (20%), Positives = 50/150 (33%), Gaps = 39/150 (26%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLFGTPEFI-----PPEII---NYEPIGIESDMWSIGVIT 139
IK+ DFGLA+ + T + PE++ +Y + D+WS+G I
Sbjct: 158 QIKLADFGLARIY--SFQMAL---TSVVVTLWYRAPEVLLQSSYAT-PV--DLWSVGCIF 209
Query: 140 YVLLSGLSPFMGENDSETFANITRA----------------EFDFDD-------EAFEAL 176
+ F G +D + I F + +
Sbjct: 210 AEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDI 269
Query: 177 SEDAKDFISSLLVKRKEKRLTAKQCLSHLW 206
E KD + L KR++A LSH +
Sbjct: 270 DELGKDLLLKCLTFNPAKRISAYSALSHPY 299
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 55.4 bits (134), Expect = 3e-09
Identities = 41/185 (22%), Positives = 72/185 (38%), Gaps = 44/185 (23%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEII-NYEPIGIESDMWSIGVITYVLLSGL 146
+KI+DFGLA+ + + V T + PE+I ++ D+WS+G I +L+G
Sbjct: 164 ELKILDFGLARHADAEMTGYV--VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
Query: 147 SPFMGEN---------------DSETFANIT-------------RAEFDFDDEAFEALSE 178
+ F G++ +E + DF + F S
Sbjct: 222 TLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFT-QLFPRASP 280
Query: 179 DAKDFISSLLVKRKEKRLTAKQCLSHLWIAQ---KDSSPGVNKII---------STDKLK 226
A D + +L +KRLTA Q L+H + + + + D+ K
Sbjct: 281 QAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQPFDDSLEHEKLTVDEWK 340
Query: 227 KYIYR 231
++IY+
Sbjct: 341 QHIYK 345
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM
related cell adhesion molecule, fibronectin type III
domain, structural genomics; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 127
Score = 52.8 bits (127), Expect = 3e-09
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWV 48
+P+PP SV ++W+ P D IT +++E + A +P +
Sbjct: 16 VPNPPFDLELTDQLDKSVQLSWT-PGDDNNSPITKFIIEYEDAMHKPGL 63
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 55.5 bits (134), Expect = 3e-09
Identities = 42/184 (22%), Positives = 64/184 (34%), Gaps = 52/184 (28%)
Query: 60 RGLGH-HSLVTV--DPKILPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFI 116
R L + HS D K P+N+ + + +K+ DFG A+++ P +I
Sbjct: 167 RSLAYIHSFGICHRDIK--PQNL-LLDPDTAVLKLCDFGSAKQLVRGEPNV------SYI 217
Query: 117 ------PPEII----NY-EPIGIESDMWSIGVITYVLLSGLSPFMGEN------------ 153
PE+I +Y I D+WS G + LL G F G++
Sbjct: 218 CSRYYRAPELIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 273
Query: 154 ---DSETFANIT--RAEFDFD-------DEAFEA-LSEDAKDFISSLLVKRKEKRLTAKQ 200
E + EF F + F +A S LL RLT +
Sbjct: 274 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 333
Query: 201 CLSH 204
+H
Sbjct: 334 ACAH 337
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 55.0 bits (133), Expect = 3e-09
Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 6/133 (4%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIG----IESDMWSIGVITYVLL 143
+IK+ DFG++ ++ G ++ PE I+ + SD+WS+G+ Y L
Sbjct: 164 NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELA 223
Query: 144 SGLSPFMG-ENDSETFANITRAE-FDFDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQC 201
+G P+ + + + + + + S +F++ L K + KR K+
Sbjct: 224 TGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKEL 283
Query: 202 LSHLWIAQKDSSP 214
L H +I +
Sbjct: 284 LKHPFILMYEERA 296
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 121
Score = 52.4 bits (126), Expect = 4e-09
Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 1 IPDPPSGAIGVSNNRT--SVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSER 53
+P P + + ++ +TW+ P+DG + Y++EM PW L
Sbjct: 17 LPHAPEHPVATLSTVERRAINLTWT-KPFDGNSPLIRYILEMSENNAPWTVLLAS 70
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics,
riken structural genomics/proteomics initiative, RSGI,
unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 124
Score = 52.3 bits (126), Expect = 4e-09
Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSERLFESTERG 61
P PP+ + SV + + P YDG I+ ++VE + G E + + +
Sbjct: 18 PGPPTNLGISNIGPRSVTLQFR-PGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEP 76
Query: 62 LGHHSLVT 69
V
Sbjct: 77 DARSMEVP 84
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 54.6 bits (132), Expect = 4e-09
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 13/135 (9%)
Query: 88 HIKIIDFGLAQKIN-----PDHPPRVLF-GTPEFIPPEII-NYEPIGIESDMWSIGVITY 140
++I DFG++ + + R F GTP ++ PE++ ++D+WS G+
Sbjct: 159 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAI 218
Query: 141 VLLSGLSPFMGENDSETFANITR------AEFDFDDEAFEALSEDAKDFISSLLVKRKEK 194
L +G +P+ + + D E + + + IS L K EK
Sbjct: 219 ELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEK 278
Query: 195 RLTAKQCLSHLWIAQ 209
R TA + L H + +
Sbjct: 279 RPTAAELLRHKFFQK 293
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 54.9 bits (132), Expect = 4e-09
Identities = 35/165 (21%), Positives = 53/165 (32%), Gaps = 48/165 (29%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVLLSGLS 147
+KI D G A T ++ E++ +D+WS + + L +G
Sbjct: 234 KVKIADLGNACW--VHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDY 291
Query: 148 PFMGEN------DSETFANI----------------TRAEFDFDD--------------- 170
F + D + A I EF F
Sbjct: 292 LFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEF-FTKKGDLKHITKLKPWGL 350
Query: 171 -----EAFEALSEDAK---DFISSLLVKRKEKRLTAKQCLSHLWI 207
E +E E+A DF+ +L EKR TA +CL H W+
Sbjct: 351 FEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 395
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 55.0 bits (133), Expect = 4e-09
Identities = 48/200 (24%), Positives = 75/200 (37%), Gaps = 53/200 (26%)
Query: 76 PENIM----CVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEII-NYEPIGIES 130
P N+ C +KI+DFGLA+ + V T + PEI+ N+
Sbjct: 160 PSNLAVNEDC------ELKILDFGLARHTADEMTGYV--ATRWYRAPEIMLNWMHYNQTV 211
Query: 131 DMWSIGVITYVLLSGLSPFMGEN---------------DSETFANIT------------- 162
D+WS+G I LL+G + F G + +E I+
Sbjct: 212 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ 271
Query: 163 RAEFDFDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQCLSHLWIAQ---KDSSPGVNKI 219
+ +F F + A D + +LV +KR+TA Q L+H + AQ D P +
Sbjct: 272 MPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY 330
Query: 220 --------ISTDKLKKYIYR 231
+ D+ K Y
Sbjct: 331 DQSLESRDLLIDEWKSLTYD 350
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 54.5 bits (132), Expect = 5e-09
Identities = 35/152 (23%), Positives = 53/152 (34%), Gaps = 40/152 (26%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLFGTPEFI-----PPEII----NYEPIGIESDMWSIGVI 138
+K+ DFGLA+ P R T + + PE++ Y G+ DMW++G I
Sbjct: 150 VLKLADFGLAKSFGS--PNRAY--THQVVTRWYRAPELLFGARMYGV-GV--DMWAVGCI 202
Query: 139 TYVLLSGLSPFMGENDSETFANITRA----------------------EFDFDD--EAFE 174
LL + G++D + I F F
Sbjct: 203 LAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFS 262
Query: 175 ALSEDAKDFISSLLVKRKEKRLTAKQCLSHLW 206
A +D D I L + R+TA Q L +
Sbjct: 263 AAGDDLLDLIQGLFLFNPCARITATQALKMKY 294
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 54.4 bits (131), Expect = 6e-09
Identities = 43/183 (23%), Positives = 68/183 (37%), Gaps = 50/183 (27%)
Query: 60 RGLGH-HSLVTV--DPKILPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFI 116
R +G HSL D K P+N+ V+ + +K+ DFG A+K+ P P + +I
Sbjct: 152 RAVGFIHSLGICHRDIK--PQNL-LVNSKDNTLKLCDFGSAKKLIPSEP------SVAYI 202
Query: 117 ------PPEII----NYEPIGIESDMWSIGVITYVLLSGLSPFMGEN------------- 153
PE++ Y P I D+WSIG + L+ G F GE
Sbjct: 203 CSRFYRAPELMLGATEYTP-SI--DLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMG 259
Query: 154 --DSETFANIT--RAEFDFD-------DEAF-EALSEDAKDFISSLLVKRKEKRLTAKQC 201
E + E F + E A D + +L + R+ +
Sbjct: 260 TPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEA 319
Query: 202 LSH 204
++H
Sbjct: 320 MAH 322
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 120
Score = 51.6 bits (124), Expect = 7e-09
Identities = 9/59 (15%), Positives = 16/59 (27%), Gaps = 1/59 (1%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSERLFESTE 59
P P + + + +TW +P D Y V G + +
Sbjct: 18 PSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSHPGEMQ 76
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 53.9 bits (130), Expect = 8e-09
Identities = 36/204 (17%), Positives = 54/204 (26%), Gaps = 81/204 (39%)
Query: 76 PENIMCVS-----------------------RTSHHIKIIDFGLAQKINPDHPP------ 106
PENI+ S IK+IDFG A + H
Sbjct: 165 PENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQ 224
Query: 107 -RVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVLLSGLSPFMGENDSETFANI---- 161
R PE+I + SDMWS G + L +G F E A +
Sbjct: 225 YR---------APEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESII 275
Query: 162 -------------TRAEFDFDDEAFEALSEDAK-------------------------DF 183
T + + + + DF
Sbjct: 276 QPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDF 335
Query: 184 ISSLLVKRKEKRLTAKQCLSHLWI 207
+ S+L R + + L H ++
Sbjct: 336 LYSILQIDPTLRPSPAELLKHKFL 359
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1,
NCAM-120, CD56 antigen, membra protein, glycoprotein,
structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo
sapiens}
Length = 122
Score = 51.3 bits (123), Expect = 9e-09
Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSERLFEST 58
P PS V ++ + + P GG I Y E + G + W E++
Sbjct: 8 PSSPS-IDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEAS 64
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 53.4 bits (129), Expect = 1e-08
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPR--VLFGTPEFIPPEIINYEPIGIESDMW 133
PENI+ VS ++DFG+A + + GT ++ PE + +D++
Sbjct: 162 PENIL-VSAD-DFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIY 219
Query: 134 SIGVITYVLLSGLSPFMGEN 153
++ + Y L+G P+ G+
Sbjct: 220 ALTCVLYECLTGSPPYQGDQ 239
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 53.4 bits (129), Expect = 1e-08
Identities = 32/166 (19%), Positives = 64/166 (38%), Gaps = 34/166 (20%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFI-----PPEII-NYEPIGIE 129
P N+ ++ +KI DFGLA+ ++P + + + + P ++ +
Sbjct: 148 PANLF-INTEDLVLKIGDFGLARIMDPHYSHKG-HLSEGLVTKWYRSPRLLLSPNNYTKA 205
Query: 130 SDMWSIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEAFEALSEDAKDFISSLLV 189
DMW+ G I +L+G + F G ++ E I + +E + L +I + +
Sbjct: 206 IDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMT 265
Query: 190 KRK--------------------------EKRLTAKQCLSHLWIAQ 209
+ RLTA++ LSH +++
Sbjct: 266 EPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSI 311
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 53.1 bits (128), Expect = 1e-08
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSI 135
P N++ + +KI DFG A I G+ ++ PE+ + D++S
Sbjct: 133 PPNLL-LVAGGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSNYSEKCDVFSW 189
Query: 136 GVITYVLLSGLSPFMG 151
G+I + +++ PF
Sbjct: 190 GIILWEVITRRKPFDE 205
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 53.0 bits (128), Expect = 1e-08
Identities = 36/196 (18%), Positives = 56/196 (28%), Gaps = 73/196 (37%)
Query: 76 PENIMCVSRT-----------------SHHIKIIDFGLAQKINPDHPP-------RVLFG 111
PENI+ V + IK++DFG A + H R
Sbjct: 146 PENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYR---- 201
Query: 112 TPEFIPPEIINYEPIGIESDMWSIGVITYVLLSGLSPFMGENDSETFANI---------- 161
PE+I D+WSIG I G + F + E A +
Sbjct: 202 -----APEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKH 256
Query: 162 -----TRAEFDFDDE-------------------------AFEALSEDAKDFISSLLVKR 191
+ ++ D + + E D I +L
Sbjct: 257 MIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYD 316
Query: 192 KEKRLTAKQCLSHLWI 207
KR+T ++ L H +
Sbjct: 317 PAKRITLREALKHPFF 332
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin
domain, fibronectin type III repeat, CE adhesion; 1.80A
{Homo sapiens}
Length = 215
Score = 52.1 bits (125), Expect = 2e-08
Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSERLFEST 58
P PS V ++ + + P GG I Y E + G + W E++
Sbjct: 114 PSSPSIDQ-VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEAS 170
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 52.6 bits (127), Expect = 2e-08
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 11/134 (8%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIG----IESDMWSIGVITYV-L 142
+K+ DFG++ + D + G ++ PE IN E ++SD+WS+G IT + L
Sbjct: 148 QVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLG-ITMIEL 206
Query: 143 LSGLSPFMG-ENDSETFANITRAE-FDFDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQ 200
P+ + + + F S + DF S L K ++R T +
Sbjct: 207 AILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF---SAEFVDFTSQCLKKNSKERPTYPE 263
Query: 201 CLSHLWIAQKDSSP 214
+ H + +S
Sbjct: 264 LMQHPFFTLHESKG 277
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA,
structural genomics, riken structural
genomics/proteomics initiative, cell adhesion; NMR
{Homo sapiens} SCOP: b.1.2.1
Length = 108
Score = 49.9 bits (119), Expect = 2e-08
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSER 53
PP G + V++ W PP + GYV+E + G+Q W L
Sbjct: 8 LSPPRGLV-AVRTPRGVLLHWD-PPELVPKRLDGYVLEGRQGSQGWEVLDPA 57
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3,
immunoglobulin-like beta- sandwich fold, KIAA0970,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 106
Score = 50.0 bits (120), Expect = 2e-08
Identities = 9/49 (18%), Positives = 13/49 (26%), Gaps = 1/49 (2%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVEL 50
PD + T + W P G +T Y +E
Sbjct: 8 PDQCKPPQVTCRSATCAQVNWE-VPLSNGTDVTEYRLEWGGVEGSMQIC 55
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 52.5 bits (126), Expect = 2e-08
Identities = 37/174 (21%), Positives = 62/174 (35%), Gaps = 43/174 (24%)
Query: 74 ILPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMW 133
+ P NI+ SR IK+ DFG++ ++ D GT ++ PE + ++SD+W
Sbjct: 158 VKPSNILVNSRG--EIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIW 214
Query: 134 SIGVITYVLLSGLSPFMGENDSETFANITRAEFDFDDEA--------------------- 172
S+G+ + G P + E E
Sbjct: 215 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPP 274
Query: 173 ---FEAL----------------SEDAKDFISSLLVKRKEKRLTAKQCLSHLWI 207
FE L S + +DF++ L+K +R KQ + H +I
Sbjct: 275 MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 328
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 52.3 bits (126), Expect = 2e-08
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 77 ENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIG 136
+ + ++ +KI DFGLA++ + G ++ PE+I SD+WS G
Sbjct: 143 QKVENGDLSNKILKITDFGLAREWHRTTKMSAA-GAYAWMAPEVIRASMFSKGSDVWSYG 201
Query: 137 VITYVLLSGLSPFMG 151
V+ + LL+G PF G
Sbjct: 202 VLLWELLTGEVPFRG 216
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 52.4 bits (126), Expect = 2e-08
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 15/150 (10%)
Query: 74 ILPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIG-----I 128
+ P NI+ R IK+ DFG++ ++ D G ++ PE I+ I
Sbjct: 151 VKPSNILLDERG--QIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDI 208
Query: 129 ESDMWSIGVITYVLLSGLSPFMG-ENDSETFANITRAE---FDFDDEAFEALSEDAKDFI 184
+D+WS+G+ L +G P+ + D E + + E F S D + F+
Sbjct: 209 RADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLP-GHMGF---SGDFQSFV 264
Query: 185 SSLLVKRKEKRLTAKQCLSHLWIAQKDSSP 214
L K KR + L H +I + ++
Sbjct: 265 KDCLTKDHRKRPKYNKLLEHSFIKRYETLE 294
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 52.4 bits (126), Expect = 3e-08
Identities = 33/158 (20%), Positives = 59/158 (37%), Gaps = 28/158 (17%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLF-GTPEFIPPEIINYE---PIGIESDMWSIGVITYVLL 143
+K+ DFG A + P F GTP ++ PE+I + D+WS+G+ L
Sbjct: 192 LVKLGDFGSASIMAP----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247
Query: 144 SGLSPFMGENDSETFANITRAEF--------DFDDEAFEALSEDAKDFISSLLVKRKEKR 195
P N A + + SE ++F+ S L K + R
Sbjct: 248 ERKPPLFNMN-------AMSALYHIAQNESPALQSGHW---SEYFRNFVDSCLQKIPQDR 297
Query: 196 LTAKQCLSHLWIAQKDSSPGVNKIISTDKLKKYIYRRK 233
T++ L H ++ ++ + +I + K +
Sbjct: 298 PTSEVLLKHRFVLRERPPTVIMDLI--QRTKDAVRELD 333
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 52.3 bits (126), Expect = 3e-08
Identities = 28/191 (14%), Positives = 54/191 (28%), Gaps = 54/191 (28%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLFGTPEFI------PPEII-NYEPIGIESDMWSIGVITY 140
I I DF LA++ D ++ PE++ ++ DMWS G +
Sbjct: 172 DITICDFNLAREDTADAN------KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMA 225
Query: 141 VLLSGLSPFMGEN---------------DSETFANIT--------------RAEFDFDDE 171
+ + + F G E + +
Sbjct: 226 EMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWT-A 284
Query: 172 AFEALSEDAKDFISSLLVKRKEKRLTAKQCLSHLWIAQ----KDSSPGV-------NKII 220
A D I+ +L ++R++ +Q L H + D + G+ +
Sbjct: 285 VVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLTEGLSERFHFDESVT 344
Query: 221 STDKLKKYIYR 231
+ K
Sbjct: 345 DVYDMHKIFTA 355
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 52.1 bits (125), Expect = 3e-08
Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 60/186 (32%)
Query: 76 PENIMCVSRTSHH--IKIIDFGLAQKINPDHPPRVLF-GTPEFI-----PPEII----NY 123
P NI+ + +KI D G A+ N P + L P + PE++ +Y
Sbjct: 156 PANILVMGEGPERGRVKIADMGFARLFNS--PLKPLADLDPVVVTFWYRAPELLLGARHY 213
Query: 124 EPIGIESDMWSIGVITYVLLSGLSPFMGENDSETFANITRAE------------------ 165
I D+W+IG I LL+ F + +N +
Sbjct: 214 TK-AI--DIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWE 270
Query: 166 -------------------------FDFDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQ 200
+ ++ A + LL KR+T++Q
Sbjct: 271 DIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ 330
Query: 201 CLSHLW 206
+ +
Sbjct: 331 AMQDPY 336
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 52.0 bits (125), Expect = 4e-08
Identities = 49/238 (20%), Positives = 82/238 (34%), Gaps = 82/238 (34%)
Query: 60 RGLGH-HS--LVTVDPKILPENIM----CVSRTSHHIKIIDFGLAQKINPDHPPRVLFGT 112
G+ H HS ++ D K P NI+ C +KI+DFGLA+ T
Sbjct: 138 CGIKHLHSAGIIHRDLK--PSNIVVKSDC------TLKILDFGLARTAGTSF-----MMT 184
Query: 113 PE-----FIPPEII---NYEPIGIESDMWSIGVITYVLLSGLSPFMGEN----------- 153
P + PE+I Y+ D+WS+G I ++ G F G +
Sbjct: 185 PYVVTRYYRAPEVILGMGYKE---NVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 241
Query: 154 ----DSETFANI-----------------------TRAEFDFDDEAFEALSEDAKDFISS 186
E + F D E + + A+D +S
Sbjct: 242 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK 301
Query: 187 LLVKRKEKRLTAKQCLSHLWIAQ-------KDSSPGV------NKIISTDKLKKYIYR 231
+LV KR++ + L H +I + P + + + ++ K+ IY+
Sbjct: 302 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYK 359
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain,
immunoglobulin superfamily, transmembrane,
phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A
{Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Length = 389
Score = 52.1 bits (125), Expect = 4e-08
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSE 52
P P G + ++T+ ++++ P GG I Y V++K ++ W +
Sbjct: 196 PSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVRS 247
Score = 41.3 bits (97), Expect = 1e-04
Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVE 49
P PPS G ++ S ++ + DGG I Y+V+ + +
Sbjct: 294 PSPPS-IHGQPSSGKSFKLSIT-KQDDGGAPILEYIVKYRSKDKEDQWL 340
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 51.9 bits (125), Expect = 5e-08
Identities = 46/207 (22%), Positives = 74/207 (35%), Gaps = 60/207 (28%)
Query: 76 PENIM----CVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFI------PPEII-NYE 124
P N++ C +KI DFGLA+ +PDH F T E++ PEI+ N +
Sbjct: 156 PSNLLLNTTC------DLKICDFGLARVADPDHDHTG-FLT-EYVATRWYRAPEIMLNSK 207
Query: 125 PIGIESDMWSIGVITYVLLSGLSPFMGEN---------------DSETFANIT------- 162
D+WS+G I +LS F G++ E I
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 267
Query: 163 ------RAEFDFDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQCLSHLWIAQ---KDSS 213
+ + + + F A D + +L KR+ +Q L+H ++ Q
Sbjct: 268 LLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE 326
Query: 214 PGVNKII---------STDKLKKYIYR 231
P +KLK+ I+
Sbjct: 327 PIAEAPFKFDMELDDLPKEKLKELIFE 353
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III,
protein binding; HET: MSE; 1.30A {Drosophila
melanogaster} SCOP: b.1.2.1
Length = 115
Score = 49.1 bits (117), Expect = 5e-08
Identities = 10/62 (16%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK--AGTQPWVELSERLFEST 58
PP+ + SV++ W P + G I + V+ + + W ++ +
Sbjct: 2 STYPPTPPNVTRLSDESVMLRW-MVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGK 60
Query: 59 ER 60
+
Sbjct: 61 PK 62
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 50.7 bits (122), Expect = 9e-08
Identities = 39/217 (17%), Positives = 64/217 (29%), Gaps = 68/217 (31%)
Query: 76 PENIM----CVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFI-----------PPEI 120
P N++ C +K+ DFGLA+ I+ + PE+
Sbjct: 140 PSNLLINSNC------DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEV 193
Query: 121 I-NYEPIGIESDMWSIGVITYVLLSGLSPFMGEN----------------DSETFANIT- 162
+ D+WS G I L F G + I
Sbjct: 194 MLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIES 253
Query: 163 ------------RAEFDFDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQCLSHLWIAQ- 209
++ F ++ D + +LV KR+TAK+ L H ++
Sbjct: 254 PRAREYIKSLPMYPAAPL-EKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTY 312
Query: 210 --KDSSPGVNKI-------------ISTDKLKKYIYR 231
+ P I ++T LKK I+
Sbjct: 313 HDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWN 349
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 50.3 bits (121), Expect = 1e-07
Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 40/155 (25%)
Query: 89 IKIIDFGLAQKINPDHPPRVLFGTPEFI-----PPEII----NYEPIGIESDMWSIGVIT 139
+K+ DFGLA+ + + T + PPE++ +Y P I D+W G I
Sbjct: 163 LKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGP-PI--DLWGAGCIM 219
Query: 140 YVLLSGLSPFMGENDSETFANITRA-------------------EFDFD-------DEAF 173
+ + G + A I++ + + +
Sbjct: 220 AEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRL 279
Query: 174 EAL--SEDAKDFISSLLVKRKEKRLTAKQCLSHLW 206
+A A D I LLV +R+ + L+H +
Sbjct: 280 KAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 314
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 50.6 bits (121), Expect = 1e-07
Identities = 47/238 (19%), Positives = 78/238 (32%), Gaps = 82/238 (34%)
Query: 60 RGLGH-HSLVTV--DPKILPENIM----CVSRTSHHIKIIDFGLAQKINPDHPPRVLFGT 112
G+ H HS + D K P NI+ C +KI+DFGLA+ T
Sbjct: 175 CGIKHLHSAGIIHRDLK--PSNIVVKSDC------TLKILDFGLARTAGTSF-----MMT 221
Query: 113 PEFI-----PPEII---NYEPIGIESDMWSIGVITYVLLSGLSPFMGEN----------- 153
P + PE+I Y+ D+WS+G I ++ F G +
Sbjct: 222 PYVVTRYYRAPEVILGMGYKE---NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278
Query: 154 ----DSETFANIT-----------------------RAEFDFDDEAFEALSEDAKDFISS 186
E + + F D E + + A+D +S
Sbjct: 279 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSK 338
Query: 187 LLVKRKEKRLTAKQCLSHLWIAQ----KDSSPGV---------NKIISTDKLKKYIYR 231
+LV KR++ L H +I + + + ++ K+ IY+
Sbjct: 339 MLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYK 396
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 118
Score = 46.6 bits (111), Expect = 4e-07
Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSERLFESTE 59
+PD P+ + + TS+ ++W P + + GY VE + L+ T
Sbjct: 17 VPDTPTRLVFSALGPTSLRVSWQEPRCERP--LQGYSVEYQLLNGGELHRLNIPNPAQTS 74
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 48.8 bits (117), Expect = 4e-07
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQ-KINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWS 134
N++ + + +K+ DFGL++ K + + GTPE++ PE++ EP +SD++S
Sbjct: 167 SPNLLVDKK--YTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYS 224
Query: 135 IGVITYVLLSGLSPFMG 151
GVI + L + P+
Sbjct: 225 FGVILWELATLQQPWGN 241
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding;
2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
PDB: 2ibb_A
Length = 214
Score = 47.9 bits (114), Expect = 6e-07
Identities = 10/60 (16%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKA--GTQPWVELSERLFESTE 59
P + T+VV+ WS +ITGY + + + + +
Sbjct: 116 MPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHARS 175
Score = 44.0 bits (104), Expect = 9e-06
Identities = 10/70 (14%), Positives = 23/70 (32%), Gaps = 3/70 (4%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK--AGTQPWVELSERLFESTE 59
PP+ + SV++ W P + G I + V+ + + W ++ +
Sbjct: 2 TYPPTPPNVTRLSDESVMLRW-MVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP 60
Query: 60 RGLGHHSLVT 69
+
Sbjct: 61 KWNSELGKSF 70
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A
{Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Length = 205
Score = 47.0 bits (112), Expect = 1e-06
Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQP--WVELSERLFEST 58
P+ P G++ I W D I Y ++ P W E++ +
Sbjct: 6 PNAPKL-TGITCQADKAEIHWE-QQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTD 62
Score = 43.6 bits (103), Expect = 1e-05
Identities = 10/61 (16%), Positives = 18/61 (29%), Gaps = 3/61 (4%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPP-YDGGCMITGYVVEMK--AGTQPWVELSERLFEST 58
P +G ++VI+W+ P + Y V K W + +
Sbjct: 105 FKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQN 164
Query: 59 E 59
Sbjct: 165 N 165
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 46.9 bits (112), Expect = 2e-06
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 87 HHIKIIDFGLA---QKINPDHPPRVLFGTPEFIPPEIINYE---PIGIESDMWSIGVITY 140
+KI DFGLA + + G+ ++ PE+I + P +SD++S G++ Y
Sbjct: 169 LTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLY 228
Query: 141 VLLSGLSPFMGENDSE 156
L++G P+ N+ +
Sbjct: 229 ELMTGELPYSHINNRD 244
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 46.1 bits (110), Expect = 3e-06
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 87 HHIKIIDFGLAQKINPDHPPRVL---FGTPEFIPPEIINYE---PIGIESDMWSIGVITY 140
+ +KI DFGLA + + G+ ++ PE+I + P +SD+++ G++ Y
Sbjct: 157 NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 216
Query: 141 VLLSGLSPFMG 151
L++G P+
Sbjct: 217 ELMTGQLPYSN 227
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 46.3 bits (110), Expect = 3e-06
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 89 IKIIDFGLAQKINPD-HPPRVLFGTP-EFIPPEIINYEPIGIESDMWSIGVITYVLLS-G 145
+K+ DFGL++ + D + P ++ PE + Y I+SD+W+ GV+ + + + G
Sbjct: 357 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 416
Query: 146 LSPFMGENDSETFANITR 163
+SP+ G + S+ + + +
Sbjct: 417 MSPYPGIDLSQVYELLEK 434
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91,
TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 110
Score = 44.0 bits (104), Expect = 3e-06
Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Query: 1 IPDPPSGAIGVSN-NRTSVVITWSSPPYDGGCMITGYVVEMKAGTQ-PWVE 49
+P P + + S ++W P GY++E+ G + E
Sbjct: 9 VPATPILQLEECCTHNNSATLSWK-QPPLSTVPADGYILELDDGNGGQFRE 58
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 119
Score = 43.9 bits (104), Expect = 3e-06
Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE-MKAGTQPWVELSERLFESTE 59
+P P + V + V ++W PP + I + V + G L+ S +
Sbjct: 17 LPSAPRDVVPVLVSSRFVRLSW-RPPAEAKGNIQTFTVFFSREGDNRERALNTTQPGSLQ 75
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 46.1 bits (109), Expect = 4e-06
Identities = 24/198 (12%), Positives = 49/198 (24%), Gaps = 59/198 (29%)
Query: 88 HIKIIDFGLA-------QKINPDHPPRVLF-GTPEFIPPEIINYEPIG--IESDMWSIGV 137
+ + Q+ H ++ PE++ G +SD++S+G+
Sbjct: 166 KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGI 225
Query: 138 ITYVLLSGLSPF------------------------------------------MGENDS 155
L +G PF +
Sbjct: 226 TACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSL 285
Query: 156 ETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQCLSHLWIAQKDSSPG 215
T S F+ L + + R +A L+H + Q
Sbjct: 286 TTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI----- 340
Query: 216 VNKIISTDKLKKYIYRRK 233
K +++ L + +
Sbjct: 341 --KRRASEALPELLRPVT 356
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 45.7 bits (109), Expect = 4e-06
Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 28/106 (26%)
Query: 60 RGLGH-HSLVTVDPKIL-----PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF--- 110
RG+ H+L +P I ++M +I +
Sbjct: 122 RGMAFLHTL---EPLIPRHALNSRSVMIDED--MTARISMADVK---------FSFQSPG 167
Query: 111 --GTPEFIPPEIINYEPIGIE---SDMWSIGVITYVLLSGLSPFMG 151
P ++ PE + +P +DMWS V+ + L++ PF
Sbjct: 168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD 213
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 45.9 bits (109), Expect = 4e-06
Identities = 37/240 (15%), Positives = 63/240 (26%), Gaps = 100/240 (41%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----------------------PEII--- 121
+K+ DFGLA+ IN + ++ E PE+I
Sbjct: 167 SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQ 226
Query: 122 -NY-EPIGIESDMWSIGVITYVLLSGLSP-----------FMGENDSETFANITRAEFDF 168
NY + I D+WS G I LL+ L F G + + +
Sbjct: 227 ENYTKSI----DIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHE 282
Query: 169 DD-----------------EAFEAL-SEDAKDFISSLLVKRK------------------ 192
+ + + + +I ++
Sbjct: 283 KSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLL 342
Query: 193 --------EKRLTAKQCLSHLWIAQ---KDSSPGVNKII----------STDKLKKYIYR 231
KR+T Q L H ++ K K I S +L+ +
Sbjct: 343 ESMLKFNPNKRITIDQALDHPYLKDVRKKKLENFSTKKIILPFDDWMVLSETQLRYIFLK 402
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 45.9 bits (109), Expect = 5e-06
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Query: 90 KIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITYVLLS 144
K+ DFGLA+ I + P PE Y I+SD+WS G++ L +
Sbjct: 320 KVADFGLARLIEDNEYTAR---QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
Query: 145 -GLSPFMGENDSETFANITR 163
G P+ G + E + R
Sbjct: 377 KGRVPYPGMVNREVLDQVER 396
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 116
Score = 43.5 bits (103), Expect = 5e-06
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE-MKAGTQPWVELSERLFESTE 59
+P P + + TS+ +TW +P G I Y + M+ GT ++ T
Sbjct: 17 LPGPAPNLRAYAASPTSITVTWETPVSGNG-EIQNYKLYYMEKGTDKEQDVDVSSHSYTI 75
Query: 60 RGL 62
GL
Sbjct: 76 NGL 78
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 45.4 bits (108), Expect = 6e-06
Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 15/79 (18%)
Query: 86 SHHIKIIDFGLA---------------QKINPDHPPRVLFGTPEFIPPEIINYEPIGIES 130
+ ++ + DFGLA K + G P ++ PE+IN +
Sbjct: 144 NKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKV 203
Query: 131 DMWSIGVITYVLLSGLSPF 149
D++S G++ ++ ++
Sbjct: 204 DVFSFGIVLCEIIGRVNAD 222
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein,
leukocyte antigen related, structural genomics, NPPSFA;
NMR {Homo sapiens} SCOP: b.1.2.1
Length = 107
Score = 42.8 bits (101), Expect = 6e-06
Identities = 9/51 (17%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELS 51
P P+ I + + ++ W P G + GY ++ A +
Sbjct: 8 PGRPTMMI-STTAMNTALLQWHPPKELPG-ELLGYRLQYCRADEARPNTID 56
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 45.6 bits (108), Expect = 6e-06
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Query: 90 KIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITYVLLS 144
K+ DFGLA+ I + P PE Y I+SD+WS G++ L +
Sbjct: 403 KVADFGLARLIEDNEYTAR---QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 459
Query: 145 -GLSPFMGENDSETFANITR 163
G P+ G + E + R
Sbjct: 460 KGRVPYPGMVNREVLDQVER 479
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 45.0 bits (107), Expect = 8e-06
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 16/103 (15%)
Query: 60 RGLGH-HSLVTVDPKIL-----PENIMCVSRTSH---HIKIIDFGLAQKINPDHPPRVLF 110
G+ + + +P I+ NI S + K+ DFGL+Q+ +
Sbjct: 133 LGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLL-- 187
Query: 111 GTPEFIPPEIINYE--PIGIESDMWSIGVITYVLLSGLSPFMG 151
G +++ PE I E ++D +S +I Y +L+G PF
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 44.7 bits (106), Expect = 1e-05
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 15/82 (18%)
Query: 87 HHIKIIDFGLA------QKINPDHPPRVLFGTPEFIPPEII---------NYEPIGIESD 131
+ I DFGL Q + R+ G + PEII + P SD
Sbjct: 166 GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSD 225
Query: 132 MWSIGVITYVLLSGLSPFMGEN 153
++++G I Y L + PF +
Sbjct: 226 VFALGTIWYELHAREWPFKTQP 247
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 44.5 bits (106), Expect = 1e-05
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDM 132
N++ V T H+KI DFGLA+ + + G +P E I + +SD+
Sbjct: 147 NVL-VK-TPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESILHRIYTHQSDV 202
Query: 133 WSIGVITYVLLS-GLSPFMGENDSETFANITRAE 165
WS GV + L++ G P+ G SE + + + E
Sbjct: 203 WSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 44.7 bits (106), Expect = 1e-05
Identities = 42/226 (18%), Positives = 65/226 (28%), Gaps = 85/226 (37%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLFGTPEFIP----------------------PEII---- 121
H+K+ DFGL++ PEI+
Sbjct: 147 HVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGST 206
Query: 122 NYEPIGIESDMWSIGVITYVLLSGLSPFMGEN---------------DSETFANIT---- 162
Y GI DMWS+G I +L G F G + +E +I
Sbjct: 207 KYTK-GI--DMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFA 263
Query: 163 ------------------RAEFDFDDEAFEAL------SEDAKDFISSLLVKRKEKRLTA 198
R F + +E+A D + LL KR++A
Sbjct: 264 KTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISA 323
Query: 199 KQCLSHLWIAQ---KDSSPGVNKII----------STDKLKKYIYR 231
L H +++ + P + II S D + +Y
Sbjct: 324 NDALKHPFVSIFHNPNEEPNCDHIITIPINDNVKHSIDDYRNLVYS 369
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III
module, beta-sheet sandwich, cell membrane,
glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Length = 114
Score = 42.1 bits (99), Expect = 1e-05
Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPW 47
P PPS G ++ S ++ + DGG I Y+V+ ++ +
Sbjct: 9 PSPPS-IHGQPSSGKSFKLSIT-KQDDGGAPILEYIVKYRSKDKED 52
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein
1, midin-2, ring finger protein 60, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 127
Score = 42.6 bits (100), Expect = 1e-05
Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Query: 1 IPDPPSGAIGVSN-NRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSE 52
P+PPS + + ++ + W S I+ Y ++ T +S
Sbjct: 15 APNPPSIREELCTASHDTITVHWISD---DEFSISSYELQYTIFTGQANFISL 64
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 116
Score = 42.0 bits (99), Expect = 2e-05
Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELS 51
+PD PS + V ++++W+ PP + ++ GY++ G+ +
Sbjct: 17 VPDQPSS-LHVRPQTNCIIMSWT-PPLNPNIVVRGYIIGYGVGSPYAETVR 65
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 43.9 bits (104), Expect = 2e-05
Identities = 30/155 (19%), Positives = 53/155 (34%), Gaps = 35/155 (22%)
Query: 31 CMITGYVVEMKAG---------TQPWVELSERLFESTERGLGH-HSLVTVD---PKIL-- 75
+IT Y + G T V R+ S GL H H + P I
Sbjct: 82 WLITHY---HEMGSLYDYLQLTTLDTVSCL-RIVLSIASGLAHLHIEIFGTQGKPAIAHR 137
Query: 76 ---PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF-----GTPEFIPPEIINYEPIG 127
+NI+ V + + I D GLA + + GT ++ PE+++
Sbjct: 138 DLKSKNIL-VKK-NGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQV 195
Query: 128 IE------SDMWSIGVITYVLLSGLSPFMGENDSE 156
D+W+ G++ + + + D +
Sbjct: 196 DCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 44.2 bits (104), Expect = 2e-05
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEF----IPPEIINYEPIGIESDMW 133
N++ V+R H+ KI DFGL++ + D ++ PE IN+ SD+W
Sbjct: 466 NVLLVNR--HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVW 523
Query: 134 SIGVITYVLLS-GLSPFMGENDSETFANITR 163
S GV + LS G P+ E A I +
Sbjct: 524 SYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 554
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 43.1 bits (102), Expect = 3e-05
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDM 132
N++ V T H+KI DFGLA+ + + G +P E I + +SD+
Sbjct: 147 NVL-VK-TPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESILHRIYTHQSDV 202
Query: 133 WSIGVITYVLLS-GLSPFMGENDSETFANITRAE 165
WS GV + L++ G P+ G SE + + + E
Sbjct: 203 WSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 43.2 bits (102), Expect = 3e-05
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 90 KIIDFGLAQKINPDHPP---RVLFGTPEFIPPEIINYEPIGIE-----SDMWSIGVITYV 141
I DFGLA K GT ++ PE++ DM+++G++ +
Sbjct: 171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWE 230
Query: 142 LLSGLSPFMGEND 154
L S + G D
Sbjct: 231 LASRCTAADGPVD 243
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 43.7 bits (102), Expect = 3e-05
Identities = 32/202 (15%), Positives = 54/202 (26%), Gaps = 64/202 (31%)
Query: 47 WVELSERLFESTERGLGHHSLVTVDPK---------ILPENIMCVSRTSHHIKIID-FGL 96
W ++ + L +SLV PK L + + + H I+D + +
Sbjct: 396 WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNI 455
Query: 97 AQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVLLSGLSPFMGENDSE 156
+ + D IPP + Y IG + L E
Sbjct: 456 PKTFDSDD----------LIPPYLDQYF-------YSHIG---HHL-------KNIEHPE 488
Query: 157 TFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQCLSHLWIAQKDSSPGV 216
DF F+ ++K + H A S +
Sbjct: 489 RMTLFRMVFLDFR-------------FL-----EQK---------IRHDSTAWNASGSIL 521
Query: 217 NKIISTDKLKKYIYRRKWQFSR 238
N + K YI ++ R
Sbjct: 522 NTLQQLKFYKPYICDNDPKYER 543
Score = 29.4 bits (65), Expect = 1.1
Identities = 34/181 (18%), Positives = 52/181 (28%), Gaps = 55/181 (30%)
Query: 55 FESTERGLGHHSLVTVDPKILPENIMC--VSRTSHHI---KIIDFGLAQKINPDHPPRVL 109
FE+ E + +++V +N C V I + ID + K + L
Sbjct: 9 FETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSK-DAVSGTLRL 67
Query: 110 FGTPEFIPPEII----------NY----EPIGIESDMWSIGVITYVLLSGLSPFMGENDS 155
F T E++ NY PI E S+ Y+ ND+
Sbjct: 68 FWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI--EQRDRL--YNDN 123
Query: 156 ETFANITRAEFDFDDEAFEALSEDAKDFISSLLVKRKEKRLTAKQCLSHLWIAQKDSSPG 215
+ FA K V R + L +Q L L +
Sbjct: 124 QVFA---------------------KYN-----VSRLQPYLKLRQALLEL-----RPAKN 152
Query: 216 V 216
V
Sbjct: 153 V 153
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein,
leukocyte antigen related, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 106
Score = 40.7 bits (96), Expect = 4e-05
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSER 53
P PP + TSV +TW S +T Y ++ + AGT+ + +
Sbjct: 8 PKPPIDLVVTETTATSVTLTWDSG---NSEPVTYYGIQYRAAGTEGPFQEVDG 57
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related
receptor containing LDLR class A repeats, sorla; NMR
{Homo sapiens}
Length = 108
Score = 40.9 bits (96), Expect = 4e-05
Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 4/53 (7%)
Query: 2 PDPPSG--AIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELS 51
PD P +V W+ P + G +I Y+VE +G++ W
Sbjct: 8 PDAPRNLQLSLPREAEGVIVGHWAPPIHTHG-LIREYIVEYSRSGSKMWASQR 59
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 106
Score = 40.3 bits (95), Expect = 5e-05
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE-MKAGTQPWVE 49
P P VS + TS++ITW P Y G + GY + + T
Sbjct: 8 PGPVENLQAVSTSPTSILITWEPPAYANG-PVQGYRLFCTEVSTGKEQN 55
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 42.2 bits (100), Expect = 5e-05
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEF----IPPEIINYEPIGIESDMW 133
N++ V++ H+ KI DFGL++ + D ++ PE INY +SD+W
Sbjct: 147 NVLLVTQ--HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 204
Query: 134 SIGVITYVLLS-GLSPFMGENDSETFANITR 163
S GV+ + S G P+ G SE A + +
Sbjct: 205 SFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 235
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken
structural genomics/proteomics initiative, RSGI; NMR
{Homo sapiens} SCOP: b.1.2.1
Length = 130
Score = 40.8 bits (96), Expect = 6e-05
Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSERLFESTER 60
+P PP G + TSV + W P G +I Y + + T + + + R
Sbjct: 27 VPGPPMGILFPEVRTTSVRLIWQPPAAPNG-IILAYQITHRLNTTTANTATVEVLAPSAR 85
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 41.9 bits (99), Expect = 7e-05
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDM 132
N++ + + +++ DFG+A + PD + P E I++ +SD+
Sbjct: 145 NVL-LK-SPSQVQVADFGVADLLPPDDKQLLYSEAK--TPIKWMALESIHFGKYTHQSDV 200
Query: 133 WSIGVITYVLLS-GLSPFMGENDSETFANITR 163
WS GV + L++ G P+ G +E + +
Sbjct: 201 WSYGVTVWELMTFGAEPYAGLRLAEVPDLLEK 232
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane,
disulfide bond, glycoprotein, immunoglobulin domain,
membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A
{Homo sapiens}
Length = 589
Score = 42.3 bits (99), Expect = 8e-05
Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Query: 1 IPDPPSG--AIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKA-GTQPWVELSERLFES 57
P+PP I + + +TW+ P +I Y ++ + W ++ S
Sbjct: 198 KPNPPHNLSVINSEELSSILKLTWT-NPSIKSVIILKYNIQYRTKDASTWSQIPPEDTAS 256
Query: 58 TER 60
T
Sbjct: 257 TRS 259
Score = 36.5 bits (84), Expect = 0.006
Identities = 6/49 (12%), Positives = 10/49 (20%), Gaps = 1/49 (2%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPP-YDGGCMITGYVVEMKAGTQPWVE 49
P + V+ W P I Y + +
Sbjct: 496 PSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETA 544
Score = 35.4 bits (81), Expect = 0.012
Identities = 11/111 (9%), Positives = 27/111 (24%), Gaps = 21/111 (18%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSS-PPYDGGCMITGYVVEMKAGTQPWVELSE-------- 52
+ +V + W + PP++ I Y V + +
Sbjct: 308 SFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNATKLTVN 367
Query: 53 --------RLFESTERGLGHHSLVTV----DPKILPENIMCVSRTSHHIKI 91
L G +++T+ P + + + +
Sbjct: 368 LTNDRYLATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPKDNMLWV 418
Score = 33.8 bits (77), Expect = 0.050
Identities = 5/40 (12%), Positives = 11/40 (27%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK 41
P + + + W++P I + V
Sbjct: 400 ATHPVMDLKAFPKDNMLWVEWTTPRESVKKYILEWCVLSD 439
Score = 32.7 bits (74), Expect = 0.092
Identities = 6/51 (11%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSE 52
P+ P + N + W + + T + ++ + T + +
Sbjct: 103 PEKPKNLSCIVNEGKKMRCEW-DGGRETH-LETNFTLKSEWATHKFADCKA 151
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 41.5 bits (98), Expect = 1e-04
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 11/93 (11%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPP-RVLFGTPEFIP-----PEIINYEPIGIESD 131
N++ V+R H+ KI DFGL++ + D P PE IN+ SD
Sbjct: 140 NVLLVNR--HYAKISDFGLSKALGADDSYYTARSAGK--WPLKWYAPECINFRKFSSRSD 195
Query: 132 MWSIGVITYVLLS-GLSPFMGENDSETFANITR 163
+WS GV + LS G P+ E A I +
Sbjct: 196 VWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 228
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera
phosphorylation, transmembrane, tyrosine-protein kinase,
glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB:
2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Length = 536
Score = 41.7 bits (97), Expect = 1e-04
Identities = 8/40 (20%), Positives = 12/40 (30%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK 41
P + V + W+ P GG Y V +
Sbjct: 333 PPSAPHYLTAVGMGAKVELRWTPPQDSGGREDIVYSVTCE 372
Score = 41.3 bits (96), Expect = 2e-04
Identities = 9/40 (22%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK 41
P + TS+ ++WS PP + Y V +
Sbjct: 441 QTEPPKVRLEGRSTTSLSVSWSIPPPQQS-RVWKYEVTYR 479
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase,
glycoprotein, receptor protei tyrosine phosphatase, cell
adhesion; HET: NAG; 3.10A {Homo sapiens}
Length = 731
Score = 41.7 bits (97), Expect = 1e-04
Identities = 12/72 (16%), Positives = 20/72 (27%), Gaps = 1/72 (1%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGG-CMITGYVVEMKAGTQPWVELSERLFESTER 60
P V + I W Y+ C V ++ E + TE
Sbjct: 360 MRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTEN 419
Query: 61 GLGHHSLVTVDP 72
H++ + P
Sbjct: 420 SHPQHTITNLSP 431
Score = 41.3 bits (96), Expect = 2e-04
Identities = 10/50 (20%), Positives = 17/50 (34%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELS 51
P P + S T + I ++ +G I VE + W +
Sbjct: 262 PVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQ 311
Score = 39.8 bits (92), Expect = 5e-04
Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSERLFESTERG 61
P+ +I S + + W P G +IT Y + KA + E+
Sbjct: 463 GAVPTESIQGSTFEEKIFLQWREPTQTYG-VITLYEITYKAVSSFDPEIDLSNQSGRVSK 521
Query: 62 LGHHSLVTVD 71
LG+ +
Sbjct: 522 LGNETHFLFF 531
Score = 33.2 bits (75), Expect = 0.065
Identities = 8/73 (10%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Query: 2 PDPPSGAIGVSNNRTSVVITWS-SPPYDGGCMITGYVVEMKAGTQPWVELSERLFESTER 60
P P+ + N+T +T P + G ++ Y + ++ + + + +
Sbjct: 566 PSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEERPRRTKKTTEILKCYPV 625
Query: 61 GLGHHSLVTVDPK 73
+ + ++ +
Sbjct: 626 PIHFQNASLLNSQ 638
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 41.2 bits (97), Expect = 2e-04
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDM 132
NI+ ++ ++ K+ DFGL + + D P IP PE I Y SD+
Sbjct: 177 NIL-IN-SNLVCKVSDFGLGRVLE-DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 133 WSIGVITYVLLS-GLSPFMGENDSETFANITR 163
WS G++ + ++S G P+ ++ + +
Sbjct: 234 WSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 41.3 bits (97), Expect = 2e-04
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDM 132
N M + +K+ DFGLA+ + V T +P E + + +SD+
Sbjct: 222 NCM-LD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 279
Query: 133 WSIGVITYVLLS-GLSPFMGENDSETFANITR 163
WS GV+ + L++ G P+ N + + +
Sbjct: 280 WSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 311
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 41.1 bits (97), Expect = 2e-04
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDM 132
N M + S +K+ DFGLA+ I V +P E + +SD+
Sbjct: 154 NCM-LD-ESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDV 211
Query: 133 WSIGVITYVLLS-GLSPFMGENDSETFANITR 163
WS GV+ + LL+ G P+ + + + +
Sbjct: 212 WSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ 243
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3;
transferase, pseudo kinase domain, vaccinia related
kinase, ATP-binding; 2.00A {Homo sapiens}
Length = 352
Score = 40.9 bits (96), Expect = 2e-04
Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 19/82 (23%)
Query: 74 ILPENIMCVSRTSHHIKIIDFGLAQKINPDH--------PPRVLFGTPEFIPPEIINYEP 125
+ ENI + + +G A + P G EFI ++
Sbjct: 185 VTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFIS---MDLH- 240
Query: 126 IGIE----SDMWSIGVITYVLL 143
G SD+ S+G Y +L
Sbjct: 241 KGCGPSRRSDLQSLG---YCML 259
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 40.8 bits (96), Expect = 2e-04
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 90 KIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITYVLLS 144
KI DFGLA+ I + P PE IN+ I+SD+WS G++ +++
Sbjct: 324 KIADFGLARVIEDNEYTAREGAK---FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
Query: 145 -GLSPFMGENDSETFANITR 163
G P+ G ++ E + R
Sbjct: 381 YGRIPYPGMSNPEVIRALER 400
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone
receptor/immune system complex; 3.80A {Homo sapiens}
SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1
PDB: 3loh_E
Length = 897
Score = 41.1 bits (95), Expect = 2e-04
Identities = 9/60 (15%), Positives = 14/60 (23%), Gaps = 1/60 (1%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSERLFESTERG 61
D V + W P G +I Y V + + L +
Sbjct: 793 DDIVGPVTHEIFENNVVHLMWQEPKEPNG-LIVLYEVSYRRYGDEELHLCDTRKHFALER 851
Score = 40.3 bits (93), Expect = 4e-04
Identities = 25/174 (14%), Positives = 45/174 (25%), Gaps = 35/174 (20%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQ--------------- 45
P P I VSN+ + +++ W P G IT Y+V + +
Sbjct: 594 NPSVPLDPISVSNSSSQIILKWKPPSDPNG-NITHYLVFWERQAEDSELFELDYCLKGLK 652
Query: 46 -PWVELSERLFESTERGLGHHSLVTVD------PKILPENIMCVSRTSHHIKIIDFGLAQ 98
P S + PK + + + +S
Sbjct: 653 LPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRK--------- 703
Query: 99 KINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVI---TYVLLSGLSPF 149
V P + + G + + +++SGL F
Sbjct: 704 TFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHF 757
Score = 32.2 bits (72), Expect = 0.15
Identities = 7/76 (9%), Positives = 23/76 (30%), Gaps = 3/76 (3%)
Query: 14 NRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSERLFESTERGLGHHSLVTVDPK 73
+ +++ W + G+++ K + G ++V +DP
Sbjct: 481 SFDKILLRWEPYWPPDFRDLLGFMLFYKEAPY---QNVTEFDGQDACGSNSWTVVDIDPP 537
Query: 74 ILPENIMCVSRTSHHI 89
+ + + +
Sbjct: 538 LRSNDPKSQNHPGWLM 553
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 40.3 bits (95), Expect = 2e-04
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDM 132
N M + +K+ DFGLA+ + V T +P E + + +SD+
Sbjct: 158 NCM-LD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 215
Query: 133 WSIGVITYVLLS-GLSPFMGENDSETFANITR 163
WS GV+ + L++ G P+ N + + +
Sbjct: 216 WSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 247
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 40.3 bits (95), Expect = 2e-04
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 89 IKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITYVLL 143
IK+ DFG+ + + D P PE+ ++ +SD+WS GV+ + +
Sbjct: 143 IKVSDFGMTRFVLDDQYTSSTGTK---FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 199
Query: 144 S-GLSPFMGENDSETFANITR 163
S G P+ ++SE +I+
Sbjct: 200 SEGKIPYENRSNSEVVEDIST 220
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 40.6 bits (95), Expect = 2e-04
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDM 132
N++ VS ++ +K+ DFGL++ + + +P PE IN+ SD+
Sbjct: 521 NVL-VS-SNDCVKLGDFGLSRYMEDST---YYKASKGKLPIKWMAPESINFRRFTSASDV 575
Query: 133 WSIGVITYVLLS-GLSPFMGENDSETFANITR 163
W GV + +L G+ PF G +++ I
Sbjct: 576 WMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 607
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 40.3 bits (95), Expect = 3e-04
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 9/92 (9%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDM 132
N++ +R +KI DFGL + + + + +P PE + SD
Sbjct: 151 NLLLATR--DLVKIGDFGLMRALPQN-DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 207
Query: 133 WSIGVITYVLLS-GLSPFMGENDSETFANITR 163
W GV + + + G P++G N S+ I +
Sbjct: 208 WMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 40.4 bits (95), Expect = 3e-04
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDM 132
N++ V ++ K+ DFGL++ + D P T IP PE I + SD+
Sbjct: 181 NVL-VD-SNLVCKVSDFGLSRVLE-DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDV 237
Query: 133 WSIGVITYVLLS-GLSPFMGENDSETFANITR 163
WS GV+ + +L+ G P+ + + +++
Sbjct: 238 WSFGVVMWEVLAYGERPYWNMTNRDVISSVEE 269
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 40.1 bits (94), Expect = 3e-04
Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 19/82 (23%)
Query: 74 ILPENIMCVSRTSHHIKIIDFGLAQKINPDH--------PPRVLFGTPEFIPPEIINYEP 125
I N++ + + + D+GL+ + P+ P + GT EF ++
Sbjct: 177 IKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTS---LDAH- 232
Query: 126 IGIE----SDMWSIGVITYVLL 143
G+ SD+ +G Y +L
Sbjct: 233 KGVALSRRSDVEILG---YCML 251
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 39.9 bits (94), Expect = 4e-04
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 18/96 (18%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDM 132
N + V + +KI DFG+++ + RV G +P PE I Y ESD+
Sbjct: 163 NCL-VGA-NLLVKIGDFGMSRDVYSTDYYRV--GGHTMLPIRWMPPESIMYRKFTTESDV 218
Query: 133 WSIGV-----ITYVLLSGLSPFMGENDSETFANITR 163
WS GV TY G P+ +++E IT+
Sbjct: 219 WSFGVILWEIFTY----GKQPWFQLSNTEVIECITQ 250
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 39.8 bits (93), Expect = 4e-04
Identities = 29/140 (20%), Positives = 52/140 (37%), Gaps = 35/140 (25%)
Query: 31 CMITGY------VVEMKAGTQPWVELSERLFESTERGLGH-HSLVTVD----PKIL---- 75
++ Y + T WV RL S RGL + H+ + P I
Sbjct: 88 LLVMEYYPNGSLXKYLSLHTSDWVSSC-RLAHSVTRGLAYLHTELPRGDHYKPAISHRDL 146
Query: 76 -PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF---------GTPEFIPPEII---- 121
N++ + I DFGL+ ++ + R GT ++ PE++
Sbjct: 147 NSRNVL--VKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAV 204
Query: 122 ---NYEPIGIESDMWSIGVI 138
+ E + DM+++G+I
Sbjct: 205 NLRDXESALKQVDMYALGLI 224
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 39.9 bits (94), Expect = 4e-04
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 90 KIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITYVLLS 144
K+ DFGL++ + D + P PE++ Y +SD+W+ GV+ + + S
Sbjct: 160 KVSDFGLSRYVLDDEYTSSVGSK---FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
Query: 145 -GLSPFMGENDSETFANITR 163
G P+ +SET +I +
Sbjct: 217 LGKMPYERFTNSETAEHIAQ 236
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 39.7 bits (93), Expect = 4e-04
Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 23/132 (17%)
Query: 60 RGLGH-HSLVTVD---PKIL-----PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF 110
GL H H+ + P I +NI+ + + I D GLA K D +
Sbjct: 145 SGLCHLHTEIFSTQGKPAIAHRDLKSKNIL--VKKNGTCCIADLGLAVKFISDTNEVDIP 202
Query: 111 -----GTPEFIPPEII------NYEPIGIESDMWSIGVITYVLLSGLSPFMGENDSET-F 158
GT ++PPE++ N+ I +DM+S G+I + + + + +
Sbjct: 203 PNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262
Query: 159 ANITRAEFDFDD 170
++ ++ ++D
Sbjct: 263 HDLVPSDPSYED 274
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain,
fibron type III, cell adhesion; 1.80A {Homo sapiens}
PDB: 1x5k_A
Length = 211
Score = 39.0 bits (91), Expect = 4e-04
Identities = 9/49 (18%), Positives = 14/49 (28%), Gaps = 3/49 (6%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPP---YDGGCMITGYVVEMKAGTQPW 47
PP G + ++ ITW+ + Y V K
Sbjct: 5 MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPAN 53
Score = 35.9 bits (83), Expect = 0.005
Identities = 9/61 (14%), Positives = 17/61 (27%), Gaps = 4/61 (6%)
Query: 3 DPPSG--AIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSERLFESTE 59
PP + ++++ W P G ITGY++ +
Sbjct: 107 SPPKDVTVVSKEGKPKTIIVNWQPPSEANG-KITGYIIYYSTDVNAEIHDWVIEPVVGNR 165
Query: 60 R 60
Sbjct: 166 L 166
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 39.7 bits (93), Expect = 5e-04
Identities = 26/122 (21%), Positives = 48/122 (39%), Gaps = 22/122 (18%)
Query: 53 RLFESTERGLGH-HSLVTVD---PKIL-----PENIMCVSRTSHHIKIIDFGLAQKINP- 102
+L ST GL H H + P I +NI+ + + I D GLA + +
Sbjct: 104 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL--VKKNGTCCIADLGLAVRHDSA 161
Query: 103 ----DHPPRVLFGTPEFIPPEIINYEPIGIE------SDMWSIGVITYVLLSGLSPFMGE 152
D P GT ++ PE+++ +D++++G++ + + S
Sbjct: 162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 221
Query: 153 ND 154
D
Sbjct: 222 ED 223
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma,
epidermolysis bullosa, alternative splicing, disease
mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo
sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Length = 234
Score = 39.4 bits (92), Expect = 5e-04
Identities = 11/69 (15%), Positives = 19/69 (27%), Gaps = 1/69 (1%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSERLFESTER 60
+P P + T ++W+ P G IT Y V + +
Sbjct: 98 VPSEPGRLAFNVVSSTVTQLSWAEPAETNG-EITAYEVCYGLVNDDNRPIGPMKKVLVDN 156
Query: 61 GLGHHSLVT 69
L+
Sbjct: 157 PKNRMLLIE 165
Score = 32.4 bits (74), Expect = 0.088
Identities = 7/47 (14%), Positives = 10/47 (21%), Gaps = 5/47 (10%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE-MKAGTQPW 47
P + + W P GY V+ G
Sbjct: 6 LGAPQNPNAKAAGSRKIHFNWLPPSGK----PMGYRVKYWIQGDSES 48
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 39.5 bits (93), Expect = 5e-04
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 23/98 (23%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEF------IP-----PEIINYEPI 126
NI+ V+ + +K+ DFGL+ R + + +P PE IN+
Sbjct: 143 NIL-VA-SPECVKLGDFGLS---------RYIEDEDYYKASVTRLPIKWMSPESINFRRF 191
Query: 127 GIESDMWSIGVITYVLLS-GLSPFMGENDSETFANITR 163
SD+W V + +LS G PF + + + +
Sbjct: 192 TTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK 229
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 39.7 bits (93), Expect = 5e-04
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 87 HHIKIIDFGLAQKINPDHPP-RVLFGT--PEF-IPPEIINYEPIGIESDMWSIGVITYVL 142
+ +KI DFGL + + D +V P F PE + + SD+WS GV+ Y L
Sbjct: 182 NRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241
Query: 143 LS 144
+
Sbjct: 242 FT 243
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 39.6 bits (93), Expect = 5e-04
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 87 HHIKIIDFGLAQKINPDHPP-RVLFGT--PEF-IPPEIINYEPIGIESDMWSIGVITYVL 142
+ +KI DFGL + + D +V P F PE + + SD+WS GV+ Y L
Sbjct: 151 NRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
Query: 143 LS 144
+
Sbjct: 211 FT 212
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 126
Score = 37.8 bits (88), Expect = 5e-04
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVE 49
P+ PS + V TS+V++W+ PP + ++ GY + G+
Sbjct: 28 PEVPSS-LHVRPLVTSIVVSWT-PPENQNIVVRGYAIGYGIGSPHAQT 73
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 39.6 bits (93), Expect = 6e-04
Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 13/80 (16%)
Query: 90 KIIDFGLAQKINPDH-----PPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVLLS 144
K+ DFGL ++ + P + + PE + + +SD+WS G++ + + S
Sbjct: 329 KVSDFGLTKEASSTQDTGKLPVK-------WTAPEALREKKFSTKSDVWSFGILLWEIYS 381
Query: 145 -GLSPFMGENDSETFANITR 163
G P+ + + +
Sbjct: 382 FGRVPYPRIPLKDVVPRVEK 401
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 39.2 bits (92), Expect = 6e-04
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 25/100 (25%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFI-------------PPEIINYE 124
NI+ V+ ++ K+ DFGL+ RVL PE PE I+Y
Sbjct: 177 NIL-VN-SNLVCKVSDFGLS---------RVLEDDPEATYTTSGGKIPIRWTAPEAISYR 225
Query: 125 PIGIESDMWSIGVITYVLLS-GLSPFMGENDSETFANITR 163
SD+WS G++ + +++ G P+ ++ E I
Sbjct: 226 KFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND 265
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 39.2 bits (92), Expect = 6e-04
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 9/93 (9%)
Query: 78 NIMCVSRTSHHI-KIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESD 131
N + + KI DFG+A+ I R G +P PE ++D
Sbjct: 170 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRK--GGCAMLPVKWMPPEAFMEGIFTSKTD 227
Query: 132 MWSIGVITYVLLS-GLSPFMGENDSETFANITR 163
WS GV+ + + S G P+ +++ E +T
Sbjct: 228 TWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 260
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 39.2 bits (92), Expect = 6e-04
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 85 TSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVIT 139
+ H+KI DFGLA+ + D V+ P P PE ++ +SD+WS GV+
Sbjct: 162 SEAHVKIADFGLAKLLPLDKDYYVV-REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 220
Query: 140 YVLLS-GLSPFMGENDSETFANITR 163
Y L + + R
Sbjct: 221 YELFTYCDKSCSPSAEFLRMMGCER 245
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 39.1 bits (92), Expect = 7e-04
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 89 IKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITYVLL 143
+K+ DFG+ + + D + P PE+ +Y +SD+W+ G++ + +
Sbjct: 143 VKVSDFGMTRYVLDDQYVSSVGTK---FPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVF 199
Query: 144 S-GLSPFMGENDSETFANITR 163
S G P+ +SE +++
Sbjct: 200 SLGKMPYDLYTNSEVVLKVSQ 220
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 39.1 bits (92), Expect = 7e-04
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 90 KIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITYVLLS 144
KI DFGLA+ I + P PE INY I+SD+WS G++ +++
Sbjct: 149 KIADFGLARLIEDNEYTAREGAK---FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
Query: 145 -GLSPFMGENDSETFANITR 163
G P+ G + E N+ R
Sbjct: 206 HGRIPYPGMTNPEVIQNLER 225
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 114
Score = 37.0 bits (86), Expect = 8e-04
Identities = 9/40 (22%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Query: 2 PDPPSG--AIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 39
P I +V+++W P G IT Y++
Sbjct: 9 TSAPKDLTVITREGKPRAVIVSWQPPLEANG-KITAYILF 47
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 39.0 bits (91), Expect = 8e-04
Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 19/82 (23%)
Query: 74 ILPENIMCVSRTSHHIKIIDFGLAQKINPD----HPP----RVLFGTPEFIPPEIINYEP 125
I N++ + + ++D+GLA + P+ R GT EF I+
Sbjct: 178 IKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTS---IDAH- 233
Query: 126 IGIE----SDMWSIGVITYVLL 143
G+ D+ +G Y ++
Sbjct: 234 NGVAPSRRGDLEILG---YCMI 252
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 38.9 bits (91), Expect = 0.001
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 9/93 (9%)
Query: 78 NIMCVSRTSHHI-KIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESD 131
N + + KI DFG+A+ I R G +P PE ++D
Sbjct: 211 NCLLTCPGPGRVAKIGDFGMARDIYRAGYYRK--GGCAMLPVKWMPPEAFMEGIFTSKTD 268
Query: 132 MWSIGVITYVLLS-GLSPFMGENDSETFANITR 163
WS GV+ + + S G P+ +++ E +T
Sbjct: 269 TWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 301
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2,
NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: b.1.2.1
Length = 108
Score = 36.7 bits (85), Expect = 0.001
Identities = 9/44 (20%), Positives = 14/44 (31%), Gaps = 1/44 (2%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQ 45
P VS S+ ++W P G +I Y +
Sbjct: 8 PSTVPIMHQVSATMRSITLSWPQPEQPNG-IILDYEIRYYEKEH 50
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 38.4 bits (90), Expect = 0.001
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 17/85 (20%)
Query: 89 IKIIDFGLAQKINPDH---------PPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVIT 139
+K+ DFGL++ + D P + + PE + Y I+SD+W+ GV+
Sbjct: 150 VKVADFGLSRLMTGDTYTAHAGAKFPIK-------WTAPESLAYNKFSIKSDVWAFGVLL 202
Query: 140 YVLLS-GLSPFMGENDSETFANITR 163
+ + + G+SP+ G + S+ + + +
Sbjct: 203 WEIATYGMSPYPGIDLSQVYELLEK 227
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 38.6 bits (90), Expect = 0.001
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 22/117 (18%)
Query: 60 RGLGH-HSLVTVD---PKIL-----PENIMCVSRTSHHIKIIDFGLAQKINP-----DHP 105
GL H H + P I +NI+ + + I D GLA + + D
Sbjct: 150 SGLAHLHMEIVGTQGKPAIAHRDLKSKNIL--VKKNGTCCIADLGLAVRHDSATDTIDIA 207
Query: 106 PRVLFGTPEFIPPEIINYEPIGIE------SDMWSIGVITYVLLSGLSPFMGENDSE 156
P GT ++ PE+++ +D++++G++ + + S D +
Sbjct: 208 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 264
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 38.2 bits (89), Expect = 0.001
Identities = 13/84 (15%), Positives = 20/84 (23%), Gaps = 28/84 (33%)
Query: 76 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSI 135
P + ++ D V+ P +P + D+ I
Sbjct: 157 PSRVR-------------------VSIDG--DVVLAYPATMPDA-------NPQDDIRGI 188
Query: 136 GVITYVLLSGLSPFMGENDSETFA 159
G Y LL P A
Sbjct: 189 GASLYALLVNRWPLPEAGVRSGLA 212
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase
receptor HTK, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 109
Score = 36.7 bits (85), Expect = 0.001
Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 39
P S ++ +S+ + W+ P G + Y V+
Sbjct: 8 PPAVSDIRVTRSSPSSLSLAWAVPRAPSG-AVLDYEVK 44
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 38.4 bits (90), Expect = 0.001
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 19/96 (19%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDH---------PPRVLFGTPEFIPPEIINYEPIGI 128
N++ VS ++ +K+ DFGL++ + P + ++ PE IN+
Sbjct: 146 NVL-VS-SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-------WMAPESINFRRFTS 196
Query: 129 ESDMWSIGVITYVLLS-GLSPFMGENDSETFANITR 163
SD+W GV + +L G+ PF G +++ I
Sbjct: 197 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 232
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 38.0 bits (89), Expect = 0.001
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDM 132
N++ V ++KI D GL +++ ++ +P PE I Y I+SD+
Sbjct: 158 NVL-VYD-KLNVKISDLGLFREVYAADYYKL--LGNSLLPIRWMAPEAIMYGKFSIDSDI 213
Query: 133 WSIGVITYVLLS-GLSPFMGENDSETFANITR 163
WS GV+ + + S GL P+ G ++ + I
Sbjct: 214 WSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN 245
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 38.0 bits (89), Expect = 0.001
Identities = 18/103 (17%), Positives = 34/103 (33%), Gaps = 20/103 (19%)
Query: 67 LVTVDPKILPENIMCVSRTSHHIKIIDFGLAQKINPD----HPPRVLFGTPEFIPPE-II 121
L+ + N + K+ D G++ + P ++PPE I
Sbjct: 145 LLIREEDRKTGNPPFI-------KLSDPGISITVLPKDILQERIP-------WVPPECIE 190
Query: 122 NYEPIGIESDMWSIGVITYVLLS-GLSPFMGENDSETFANITR 163
N + + + +D WS G + + S G P +
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED 233
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 38.3 bits (89), Expect = 0.001
Identities = 39/256 (15%), Positives = 66/256 (25%), Gaps = 108/256 (42%)
Query: 88 HIKIIDFGLAQKINPDHPPRVLFGTPEFIP----------------------------PE 119
+K+ DFGLA+ ++ PE
Sbjct: 194 SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPE 253
Query: 120 II----NY-EPIGIESDMWSIGVITYVLLSGLSP-----------FMGENDSETFANITR 163
+I NY E I D+WSIG I LL+ + F G + +
Sbjct: 254 LILLQENYTEAI----DVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKA 309
Query: 164 AEFDF--------------------DDEAFEAL-SEDAKDFISSLLVKRK---------- 192
+E EAL EDAK +I +
Sbjct: 310 GNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPAS 369
Query: 193 ----------------EKRLTAKQCLSHLWIAQ---KDSSPGVNKII----------STD 223
KR+T +CL+H + + + + +
Sbjct: 370 SADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAEVETNATEKVRLPFNDWMNMDEP 429
Query: 224 KLKKYIYRRKWQFSRH 239
+L+ + ++
Sbjct: 430 QLRYAFVKEIQRYHPE 445
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 38.0 bits (89), Expect = 0.002
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDM 132
N + V + +KI DFG+++ I RV G +P PE I Y ESD+
Sbjct: 188 NCL-VGQ-GLVVKIGDFGMSRDIYSTDYYRV--GGRTMLPIRWMPPESILYRKFTTESDV 243
Query: 133 WSIGVITYVLLS-GLSPFMGENDSETFANITR 163
WS GV+ + + + G P+ +++E IT+
Sbjct: 244 WSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ 275
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic,
protein-protein SH2 domain, ATP-binding,
phosphoprotein; 2.10A {Homo sapiens}
Length = 103
Score = 35.9 bits (83), Expect = 0.002
Identities = 7/38 (18%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 39
P+ V TS+ I+W + + Y +
Sbjct: 8 SSVPTKLEVVDATPTSLKISWDAYYSSWQ-NVKYYRIT 44
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic,
protein-protein SH2 domain, ATP-binding,
phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A
1ttg_A 3rzw_A 1fna_A
Length = 101
Score = 35.9 bits (83), Expect = 0.002
Identities = 8/39 (20%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 39
+ P+ V+ TS++I+W P + Y +
Sbjct: 4 VSSVPTKLEVVAATPTSLLISW-DAPMSSS-SVYYYRIT 40
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 37.7 bits (88), Expect = 0.002
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 87 HHIKIIDFGLAQKINPDHPP-RVLFGT--PEF-IPPEIINYEPIGIESDMWSIGVITYVL 142
H +KI DFGL + I D V P F PE + I SD+WS GV + L
Sbjct: 163 HQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL 222
Query: 143 LS 144
L+
Sbjct: 223 LT 224
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative
splicing, cell adhesion, coiled coil, EGF-like domain,
extracellular matrix; 2.40A {Homo sapiens}
Length = 100
Score = 35.4 bits (82), Expect = 0.002
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 6/53 (11%)
Query: 3 DPPSGAIGVSN-NRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSERL 54
PP I V+N T+ V+TW P I G +V P E + L
Sbjct: 3 QPPFN-IKVTNITLTTAVVTWQPPILP----IEGILVTFGRKNDPSDETTVDL 50
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 37.3 bits (87), Expect = 0.002
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDM 132
N M ++ + + DFGL++KI R G +P E + + SD+
Sbjct: 167 NCM-LA-EDMTVCVADFGLSRKIYSGDYYRQ--GCASKLPVKWLALESLADNLYTVHSDV 222
Query: 133 WSIGVITYVLLS-GLSPFMGENDSETFANITR 163
W+ GV + +++ G +P+ G ++E + +
Sbjct: 223 WAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG 254
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 37.3 bits (87), Expect = 0.003
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 10/92 (10%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDM 132
N M V+ +KI DFG+ + I R G +P PE + SD+
Sbjct: 168 NCM-VA-EDFTVKIGDFGMTRDIYETDYYRK--GGKGLLPVRWMSPESLKDGVFTTYSDV 223
Query: 133 WSIGVITYVLLS-GLSPFMGENDSETFANITR 163
WS GV+ + + + P+ G ++ + +
Sbjct: 224 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 255
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor,
fibronectin type III domain, alternative cell membrane,
disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Length = 290
Score = 37.1 bits (86), Expect = 0.003
Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 9/59 (15%)
Query: 3 DPPSGAIGV--------SNNRTSVVITWSS-PPYDGGCMITGYVVEMKAGTQPWVELSE 52
D PS A + +V + W + PP++ I Y V + +
Sbjct: 2 DRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTV 60
Score = 35.6 bits (82), Expect = 0.009
Identities = 10/53 (18%), Positives = 16/53 (30%), Gaps = 4/53 (7%)
Query: 3 DPPSGAIGV---SNNRTSVVITWSSPPYDGG-CMITGYVVEMKAGTQPWVELS 51
PPS V + V+ W P D I Y + + ++
Sbjct: 195 APPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVN 247
Score = 33.6 bits (77), Expect = 0.039
Identities = 5/38 (13%), Positives = 13/38 (34%), Gaps = 4/38 (10%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 39
P + + + W++P + Y++E
Sbjct: 101 ATHPVMDLKAFPKDNMLWVEWTTPRE----SVKKYILE 134
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 111
Score = 35.4 bits (82), Expect = 0.003
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 39
P +TSV + W P G +I Y ++
Sbjct: 11 PSQVVVIRQERAGQTSVSLLWQEPEQPNG-IILEYEIK 47
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 37.2 bits (86), Expect = 0.003
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 81 CVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTP---EFIPPEIINYEPIGIESDMWSIGV 137
+ + +KI DFGLA+ I D +++ PE I I+SD+WS GV
Sbjct: 224 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 283
Query: 138 ITYVLLS-GLSPFMGENDSETF 158
+ + + S G SP+ G E F
Sbjct: 284 LLWEIFSLGASPYPGVKIDEEF 305
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 36.8 bits (86), Expect = 0.003
Identities = 16/81 (19%), Positives = 34/81 (41%), Gaps = 13/81 (16%)
Query: 89 IKIIDFGLAQKINPDH-----PPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVLL 143
K+ DFGL ++ + P + + PE + + +SD+WS G++ + +
Sbjct: 156 AKVSDFGLTKEASSTQDTGKLPVK-------WTAPEALREKKFSTKSDVWSFGILLWEIY 208
Query: 144 S-GLSPFMGENDSETFANITR 163
S G P+ + + +
Sbjct: 209 SFGRVPYPRIPLKDVVPRVEK 229
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY
acidic protein fold, fibronectin type III fold, hormone-
growth factor complex; NMR {Homo sapiens}
Length = 680
Score = 37.2 bits (85), Expect = 0.004
Identities = 11/74 (14%), Positives = 25/74 (33%), Gaps = 7/74 (9%)
Query: 2 PDPP-----SGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSERLF 55
P P + + S+ +V I W P + + Y V + + +++
Sbjct: 267 PPAPANLRLANSTVNSDGSVTVTIVW-DLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKR 325
Query: 56 ESTERGLGHHSLVT 69
T G + ++
Sbjct: 326 RKTTDGFQNSVILE 339
Score = 37.2 bits (85), Expect = 0.004
Identities = 8/46 (17%), Positives = 16/46 (34%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPW 47
P+ S + V + + +W + +TG+ V T
Sbjct: 528 PENLSASFIVQDVNITGHFSWKMAKANLYQPMTGFQVTWAEVTTES 573
Score = 36.5 bits (83), Expect = 0.006
Identities = 6/40 (15%), Positives = 12/40 (30%), Gaps = 1/40 (2%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK 41
P + + W S ++ YVV+ +
Sbjct: 161 LKPRKELRFTELQSGQLEVKW-SSKFNISIEPVIYVVQRR 199
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine
6 R beta subunit, signaling protein; 2.00A {Homo
sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Length = 215
Score = 36.5 bits (84), Expect = 0.004
Identities = 14/120 (11%), Positives = 40/120 (33%), Gaps = 6/120 (5%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSERLFESTERG 61
P+ P + N + W + T + ++ + T + + + T
Sbjct: 8 PEKPKNLSCIVNEGKKMRCEW-DGGRETHL-ETNFTLKSEWATHKFADCKAKRDTPTSCT 65
Query: 62 LGHHSLVTVDPKILPENIMCVSRTSHHI-KIIDFGLAQKINPDHPPRVLFGTPEFIPPEI 120
+ + ++ V+ ++ + + I+F K+ P+ P + E + +
Sbjct: 66 VDYSTVYFVNIEV---WVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSIL 122
Score = 31.9 bits (72), Expect = 0.12
Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Query: 1 IPDPPSG--AIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKA-GTQPWVELSERLFES 57
P+PP I + + +TW + P +I Y ++ + W ++ S
Sbjct: 103 KPNPPHNLSVINSEELSSILKLTW-TNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTAS 161
Query: 58 TER 60
T
Sbjct: 162 TRS 164
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A
{Homo sapiens} PDB: 1fnh_A
Length = 290
Score = 36.7 bits (85), Expect = 0.004
Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE-MKAGTQPWVE 49
PP A T++ I+W + ITG+ V+ + A Q ++
Sbjct: 113 VSPPRRARVTDATETTITISWRTKTET----ITGFQVDAVPANGQTPIQ 157
Score = 34.4 bits (79), Expect = 0.025
Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSE 52
D PS ++ S++++W P ITGY+++ + G+ P +
Sbjct: 202 IDAPSNLRFLATTPNSLLVSWQPPRAR----ITGYIIKYEKPGSPPREVVPR 249
Score = 33.6 bits (77), Expect = 0.037
Identities = 9/46 (19%), Positives = 15/46 (32%), Gaps = 4/46 (8%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPW 47
P+ TS+ W+ P +TGY V + +
Sbjct: 21 IPAPTDLKFTQVTPTSLSAQWTPPNVQ----LTGYRVRVTPKEKTG 62
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 36.9 bits (86), Expect = 0.004
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 89 IKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITYVLL 143
+KI DFG++++ G +P PE +NY ESD+WS G++ +
Sbjct: 252 LKISDFGMSREEADGVYAAS--GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETF 309
Query: 144 S-GLSPFMGENDSETFANITR 163
S G SP+ ++ +T + +
Sbjct: 310 SLGASPYPNLSNQQTREFVEK 330
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 37.3 bits (86), Expect = 0.004
Identities = 24/153 (15%), Positives = 47/153 (30%), Gaps = 69/153 (45%)
Query: 4 PPSGAIGVS--NNRTSVVITWSSPPYD--GGCMITGYVVEMKAGT---QPWVELSER--- 53
P + +S N ++V++ PP G + + + KA + Q + SER
Sbjct: 361 PAGKQVEISLVNGAKNLVVS--GPPQSLYGLNL---TLRKAKAPSGLDQSRIPFSERKLK 415
Query: 54 ----------------LFESTERGLG----------HHSL-VTV-------DPKILPENI 79
L +++ + + V D ++L +I
Sbjct: 416 FSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSI 475
Query: 80 ----------MCV-------SRTSHHIKIIDFG 95
+ V + +H I+DFG
Sbjct: 476 SERIVDCIIRLPVKWETTTQFKATH---ILDFG 505
Score = 31.6 bits (71), Expect = 0.28
Identities = 31/207 (14%), Positives = 63/207 (30%), Gaps = 59/207 (28%)
Query: 35 GYV---VEMKAGTQPWVELSERLFESTERG-LGH---HSLVTVDPKILPENIMCVSRTSH 87
GYV VE Q + ++ E L H+L K+L EN + +T
Sbjct: 66 GYVSSLVEPSKVGQ-FDQVLNLCLTEFENCYLEGNDIHALAA---KLLQENDTTLVKTKE 121
Query: 88 HIKI---IDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVLLS 144
IK + + LF + + +
Sbjct: 122 LIKNYITARIMAKRPFDKKSNSA-LF--------RAVGEGNAQL-----------VAI-- 159
Query: 145 GLSPFMGENDSETFANITRAEFDFDD-----EAFEALSEDAKDFISSLLVKRKEKRLTAK 199
F G+ +++ + F++ + + L D F + L + L A+
Sbjct: 160 ----FGGQGNTDDY---------FEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAE 206
Query: 200 QCLSH-----LWIAQKDSSPGVNKIIS 221
+ + W+ ++P + ++S
Sbjct: 207 KVFTQGLNILEWLENPSNTPDKDYLLS 233
Score = 28.5 bits (63), Expect = 2.2
Identities = 22/164 (13%), Positives = 44/164 (26%), Gaps = 82/164 (50%)
Query: 14 NRTSVVITWSSPPYDGGCMITGYVVEMKAGTQP---------WVELSER----------- 53
N S T+ S G T + TQP + +L +
Sbjct: 1711 NEHSTSYTFRSE--KGLLSATQF-------TQPALTLMEKAAFEDLKSKGLIPADATFAG 1761
Query: 54 --------L--------FEST-----ERGL-------------GHHSLVTVDPKILPENI 79
L ES RG+ ++ ++ ++P
Sbjct: 1762 HSLGEYAALASLADVMSIESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINP-----GR 1816
Query: 80 MCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINY 123
+ S + ++ + + ++ T + EI+NY
Sbjct: 1817 VAASFSQEALQYVVERVGKR------------TGWLV--EIVNY 1846
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 36.5 bits (85), Expect = 0.004
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPP-RVLFGTPEFIP-----PEIINYEPIGIESD 131
N++ + +KI DFGLA+ + H RV P PE + SD
Sbjct: 164 NVL-LD-NDRLVKIGDFGLAKAVPEGHEYYRV--REDGDSPVFWYAPECLKEYKFYYASD 219
Query: 132 MWSIGVITYVLLS 144
+WS GV Y LL+
Sbjct: 220 VWSFGVTLYELLT 232
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 36.5 bits (85), Expect = 0.005
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 89 IKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITYVLL 143
+ + DFGL++KI R G +P E + +SD+W+ GV + +
Sbjct: 186 VCVADFGLSKKIYSGDYYRQ--GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIA 243
Query: 144 S-GLSPFMGENDSETFANITR 163
+ G++P+ G + E + +
Sbjct: 244 TRGMTPYPGVQNHEMYDYLLH 264
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK
protein, structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Mus
musculus} SCOP: b.1.2.1
Length = 120
Score = 34.9 bits (80), Expect = 0.005
Identities = 3/56 (5%), Positives = 10/56 (17%), Gaps = 5/56 (8%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-----AGTQPWVELSE 52
P + S+ + W + + + +
Sbjct: 16 LSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYT 71
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken
structural genomics/proteomics initiative, RSGI; NMR
{Homo sapiens} SCOP: b.1.2.1
Length = 119
Score = 35.1 bits (81), Expect = 0.005
Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSERL 54
+P P TS+ ++W P G ++TGY + + + ++ L
Sbjct: 17 VPGPVGHLSFSEILDTSLKVSWQEPGEKNG-ILTGYRISWEEYNRTNTRVTHYL 69
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin
type III domain containing protein, structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 115
Score = 34.6 bits (80), Expect = 0.006
Identities = 9/52 (17%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE-MKAGTQPWVELS 51
+P P + TS++++W+ P D I Y + ++
Sbjct: 17 VPGQPLNFKAEPESETSILLSWTPPRSDT---IANYELVYKDGEHGEEQRIT 65
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains
of fibronectin-III domains, FOU fibronectin-III domains
PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens}
SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A*
3cxe_A* 1egj_A* 1c8p_A
Length = 419
Score = 36.1 bits (82), Expect = 0.007
Identities = 8/48 (16%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVE 49
PPS + V+ + S + W + + + ++ + T W +
Sbjct: 322 MAPPS--LQVTKDGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKD 367
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 35.7 bits (83), Expect = 0.008
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 16/85 (18%)
Query: 89 IKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV-----I 138
+KI DFGL++ + + + IP E + +SD+WS GV +
Sbjct: 189 MKISDFGLSRDVYEEDSYVK--RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 139 TYVLLSGLSPFMGENDSETFANITR 163
T G +P+ G F +
Sbjct: 247 TL----GGNPYPGIPPERLFNLLKT 267
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 115
Score = 34.3 bits (79), Expect = 0.009
Identities = 9/50 (18%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELS 51
PD P+ ++ V+ W P + Y +++ A P ++
Sbjct: 8 PDGPTQLRALNLTEGFAVLHWKPPQNP----VDTYDIQVTAPGAPPLQAE 53
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 105
Score = 34.0 bits (78), Expect = 0.009
Identities = 8/50 (16%), Positives = 16/50 (32%), Gaps = 4/50 (8%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELS 51
+ P + ++TW+ PP GY++ E+
Sbjct: 8 LEAPRDLEAKEVTPRTALLTWTEPPVR----PAGYLLSFHTPGGQTQEIL 53
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 35.0 bits (81), Expect = 0.013
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 22/86 (25%)
Query: 71 DPKILPENI-MCVSRTSHHIKIIDFGLAQK-INPD---HPP----RVLFGTPEFIPPEII 121
D K P+N M + + + + IIDFGLA+K + H P + L GT + I
Sbjct: 130 DVK--PDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS---I 184
Query: 122 NYEPIGIES----DMWSIGVITYVLL 143
N +GIE D+ S+G YVL+
Sbjct: 185 N-THLGIEQSRRDDLESLG---YVLM 206
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 35.0 bits (81), Expect = 0.015
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 18/96 (18%)
Query: 78 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDM 132
N + V + +KI DFGL++ I + + IP PE I Y ESD+
Sbjct: 204 NCL-VGE-NMVVKIADFGLSRNIYSADYYKA--DGNDAIPIRWMPPESIFYNRYTTESDV 259
Query: 133 WSIGV-----ITYVLLSGLSPFMGENDSETFANITR 163
W+ GV +Y GL P+ G E +
Sbjct: 260 WAYGVVLWEIFSY----GLQPYYGMAHEEVIYYVRD 291
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 34.9 bits (81), Expect = 0.016
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 89 IKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITYVLL 143
+KI DFGLA+ I D +P PE I I+SD+WS GV+ + +
Sbjct: 187 VKICDFGLARDIYKDPDYVR--KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
Query: 144 S-GLSPFMG 151
S G SP+ G
Sbjct: 245 SLGASPYPG 253
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 34.7 bits (80), Expect = 0.017
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 22/85 (25%)
Query: 74 ILPENIM---CVSRTSHHIKIIDFGLAQK-INPD---HPP----RVLFGTPEFIPPEIIN 122
+ PEN + ++T I IIDF LA++ I+P+ H P + L GT ++ IN
Sbjct: 131 VKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMS---IN 187
Query: 123 YEPIGIES----DMWSIGVITYVLL 143
+G E D+ ++G ++ +
Sbjct: 188 TH-LGKEQSRRDDLEALG---HMFM 208
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein;
2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Length = 368
Score = 34.8 bits (80), Expect = 0.017
Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 5/49 (10%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVE 49
D P V+ TS++I+W +P + Y + G V+
Sbjct: 276 SDVPRDLEVVAATPTSLLISWDAPAVT----VRYYRITYGETGGNSPVQ 320
Score = 34.4 bits (79), Expect = 0.027
Identities = 9/48 (18%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWV 48
PP+ + ++ +TW+ PP +T ++V + V
Sbjct: 95 VPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDV 139
Score = 29.8 bits (67), Expect = 0.72
Identities = 10/38 (26%), Positives = 14/38 (36%), Gaps = 4/38 (10%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 39
D P+G S + W +P ITGY +
Sbjct: 186 LDSPTGIDFSDITANSFTVHWIAPRAT----ITGYRIR 219
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 34.6 bits (80), Expect = 0.017
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 22/85 (25%)
Query: 74 ILPENIMC---VSRTSHHIKIIDFGLAQK-INPD---HPP----RVLFGTPEFIPPEIIN 122
I P+N + S+ ++ I ++DFG+ + +P H P + L GT ++ IN
Sbjct: 132 IKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMS---IN 188
Query: 123 YEPIGIES----DMWSIGVITYVLL 143
+G E D+ ++G +V +
Sbjct: 189 TH-LGREQSRRDDLEALG---HVFM 209
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 34.6 bits (80), Expect = 0.019
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 21/98 (21%)
Query: 78 NIMCVSRTSHHI-KIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESD 131
N++ T+ H+ KI DFGLA+ I D V +P PE I ++SD
Sbjct: 194 NVLL---TNGHVAKIGDFGLARDIMNDSNYIV--KGNARLPVKWMAPESIFDCVYTVQSD 248
Query: 132 MWSIGV-----ITYVLLSGLSPFMG-ENDSETFANITR 163
+WS G+ + GL+P+ G +S+ + +
Sbjct: 249 VWSYGILLWEIFSL----GLNPYPGILVNSKFYKLVKD 282
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 34.5 bits (80), Expect = 0.019
Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 89 IKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITYVLL 143
KI DFGLA+ I D V +P PE I ESD+WS G+ + L
Sbjct: 184 TKICDFGLARDIKNDSNYVV--KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241
Query: 144 S-GLSPFMG-ENDSETFANITR 163
S G SP+ G DS+ + I
Sbjct: 242 SLGSSPYPGMPVDSKFYKMIKE 263
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken
structural genomics/proteomics initiative, RSGI,
neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 117
Score = 33.3 bits (76), Expect = 0.019
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 3 DPPSGA---IGVSNNRTSVVITWSSPP-YDGGCMITGYVVEMKAGTQPWVELSERLFEST 58
PPS + + T V++ W + +TGY V + +Q V++ S
Sbjct: 16 TPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLNTNKTSA 75
Query: 59 ERGL 62
E L
Sbjct: 76 ELVL 79
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 34.6 bits (80), Expect = 0.021
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 16/85 (18%)
Query: 89 IKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV-----I 138
+KI DFGLA+ IN + T +P PE + +SD+WS GV
Sbjct: 196 MKIADFGLARDINNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 139 TYVLLSGLSPFMGENDSETFANITR 163
T G SP+ G E F +
Sbjct: 254 TL----GGSPYPGIPVEELFKLLKE 274
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 34.6 bits (80), Expect = 0.023
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 89 IKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITYVLL 143
+KI DFGLA+ IN + T +P PE + +SD+WS GV+ + +
Sbjct: 242 MKIADFGLARDINNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 299
Query: 144 S-GLSPFMGENDSETFANITR 163
+ G SP+ G E F +
Sbjct: 300 TLGGSPYPGIPVEELFKLLKE 320
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 34.6 bits (79), Expect = 0.026
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 17/100 (17%)
Query: 65 HSLVTVDPKILPENI-MCVSRTSHHIKIIDFGLAQK-INPD---HPP----RVLFGTPEF 115
HS + I P+N M + R ++ + IIDFGLA+K + H P + L GT +
Sbjct: 120 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARY 179
Query: 116 IPPEIINYEPIGIE----SDMWSIGVITYVLLSGLSPFMG 151
+N +GIE D+ S+G + L G P+ G
Sbjct: 180 AS---VN-THLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 215
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 34.3 bits (79), Expect = 0.032
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 16/85 (18%)
Query: 89 IKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV-----I 138
+KI DFGLA+ I+ + T +P PE + +SD+WS GV
Sbjct: 230 MKIADFGLARDIHHIDYYKK--TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 287
Query: 139 TYVLLSGLSPFMGENDSETFANITR 163
T G SP+ G E F +
Sbjct: 288 TL----GGSPYPGVPVEELFKLLKE 308
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor
complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1
b.1.2.1 b.1.2.1 PDB: 1p9m_A
Length = 303
Score = 33.6 bits (76), Expect = 0.045
Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Query: 1 IPDPPSG--AIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKA-GTQPWVELSERLFES 57
P+PP I + + +TW++P +I Y ++ + W ++ S
Sbjct: 199 KPNPPHNLSVINSEELSSILKLTWTNPSIKSV-IILKYNIQYRTKDASTWSQIPPEDTAS 257
Query: 58 TE 59
T
Sbjct: 258 TR 259
Score = 28.3 bits (62), Expect = 2.0
Identities = 13/108 (12%), Positives = 37/108 (34%), Gaps = 6/108 (5%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSERLFESTERG 61
P+ P + N + W + T + ++ + T + + + T
Sbjct: 104 PEKPKNLSCIVNEGKKMRCEW-DGGRETHL-ETNFTLKSEWATHKFADCKAKRDTPTSCT 161
Query: 62 LGHHSLVTVDPKILPENIMCVSRTSHHI-KIIDFGLAQKINPDHPPRV 108
+ + ++ V+ ++ + + I+F K+ P+ P +
Sbjct: 162 VDYSTVYFVNIEV---WVEAENALGKVTSDHINFDPVYKVKPNPPHNL 206
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III
domain, oncofetal splice VARI extra-domain B, EIIIB,
ED-B, angiogenesis, integrin; 2.40A {Homo sapiens}
Length = 375
Score = 33.2 bits (76), Expect = 0.054
Identities = 11/53 (20%), Positives = 17/53 (32%), Gaps = 4/53 (7%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSERL 54
D P+G S + W +P ITGY + +R+
Sbjct: 278 LDSPTGIDFSDITANSFTVHWIAPR----ATITGYRIRHHPEHFSGRPREDRV 326
Score = 32.5 bits (74), Expect = 0.11
Identities = 8/48 (16%), Positives = 16/48 (33%), Gaps = 4/48 (8%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE-MKAGTQPWV 48
+ V +S+ + W+ I GY + + AG +
Sbjct: 96 VPQLTDLSFVDITDSSIGLRWTPLN---SSTIIGYRITVVAAGEGIPI 140
Score = 32.1 bits (73), Expect = 0.15
Identities = 9/49 (18%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVE 49
PP+ + ++ +TW+ PP +T ++V + V
Sbjct: 187 VPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVA 232
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol,
hormone-growth complex; HET: CME EST; 2.95A {Homo
sapiens}
Length = 121
Score = 32.2 bits (73), Expect = 0.056
Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE--MKAGTQPWVELS 51
+ D P+ V+ TS++I+W +P + Y + G P E +
Sbjct: 28 VSDVPTKLEVVAATPTSLLISWDAPAVT----VRYYRITYGETGGNSPVQEFT 76
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins,
protein-protein interactions, C-type lectin domain;
2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Length = 283
Score = 32.9 bits (75), Expect = 0.064
Identities = 9/60 (15%), Positives = 16/60 (26%), Gaps = 5/60 (8%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE-MKAGTQPWVELSERLFESTER 60
D P S TS+ + W + + Y V + + E+
Sbjct: 105 IDAPKNLRVGSRTATSLDLEWDNSEAE----AQEYKVVYSTLAGEQYHEVLVPKGIGPTT 160
Score = 32.1 bits (73), Expect = 0.11
Identities = 8/50 (16%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELS 51
D P + +++ TS+ + W+ I Y + + E++
Sbjct: 197 LDSPRDLMVTASSETSISLIWTKASGP----IDHYRITFTPSSGISSEVT 242
Score = 31.7 bits (72), Expect = 0.17
Identities = 10/61 (16%), Positives = 22/61 (36%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSERLFESTERG 61
D P+ + + T + W+ P ++ Y + G + L L + + +
Sbjct: 15 IDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQA 74
Query: 62 L 62
L
Sbjct: 75 L 75
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated
oncogenes (CDON)binding...; fibronectin type III, FN3;
NMR {Mus musculus} SCOP: b.1.2.1
Length = 114
Score = 31.7 bits (72), Expect = 0.075
Identities = 7/41 (17%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSS-PPYDGGCMITGYVVEMK 41
P + N T++++ W P + I G+ + +
Sbjct: 9 VAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYR 49
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain,
carbohydrase, horizontal gene transfer, hydrolase; NMR
{Bacillus circulans} SCOP: b.1.2.1
Length = 88
Score = 31.1 bits (71), Expect = 0.079
Identities = 9/37 (24%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVV 38
P P+ + +S+ ++W++ + G +TGY V
Sbjct: 4 PTAPTNLASTAQTTSSITLSWTASTDNVG--VTGYDV 38
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell
adhesion, coiled coil, EGF-like domain, extracellular
matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A
1ten_A
Length = 104
Score = 31.2 bits (71), Expect = 0.082
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 6/54 (11%)
Query: 2 PDPPSGAIGVSN-NRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSERL 54
D PS I V + T+ +ITW P + G+ + P + L
Sbjct: 3 LDAPSQ-IEVKDVTDTTALITWMPPSQP----VDGFELTYGIKDVPGDRTTIDL 51
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer,
neovascularization, cell adhesion, protein binding,
oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Length = 203
Score = 32.5 bits (74), Expect = 0.082
Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 5/52 (9%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKA--GTQPWVELS 51
PP+ + ++ +TW+ PP +T ++V + ELS
Sbjct: 114 VPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELS 162
Score = 30.9 bits (70), Expect = 0.27
Identities = 8/53 (15%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSERL 54
P+ V +S+ + W+ I GY + + A + + +
Sbjct: 23 VPQPTDLSFVDITDSSIGLRWTPLN---SSTIIGYRITVVAAGEGIPIFEDFV 72
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein,
leukocyte antigen related, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 103
Score = 30.7 bits (70), Expect = 0.12
Identities = 7/37 (18%), Positives = 10/37 (27%), Gaps = 3/37 (8%)
Query: 4 PPSGAIGVSNNRTSVVITWSSPPYDG--GCMITGYVV 38
P ++ + W P G I Y V
Sbjct: 11 FPQNLHVTGLTTSTTELAWDPPVLAERNG-RIISYTV 46
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular
matrix, adhesion, fusion protein, structural protein;
2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Length = 186
Score = 31.6 bits (72), Expect = 0.12
Identities = 7/50 (14%), Positives = 14/50 (28%), Gaps = 4/50 (8%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELS 51
D P T++ + W P Y + + + E+
Sbjct: 7 LDNPKDLEVSDPTETTLSLRWRRPVAK----FDRYRLTYVSPSGKKNEME 52
Score = 30.1 bits (68), Expect = 0.45
Identities = 8/48 (16%), Positives = 12/48 (25%), Gaps = 4/48 (8%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVE 49
P G S ++W+ P + Y V T
Sbjct: 95 VGSPKGISFSDITENSATVSWTPPR----SRVDSYRVSYVPITGGTPN 138
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 123
Score = 31.0 bits (70), Expect = 0.12
Identities = 8/51 (15%), Positives = 16/51 (31%), Gaps = 3/51 (5%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGG---CMITGYVVEMKAGTQPWVE 49
PP G V+ +V ++W+ + Y V + +
Sbjct: 19 MLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAK 69
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites,
calcium, cell adhesion molecules, cell cycle cell LINE,
conserved sequence; 1.60A {Homo sapiens} PDB: 3d1m_C
3n1q_C 3n1m_C 3n1g_C 3n1p_C
Length = 102
Score = 30.4 bits (69), Expect = 0.13
Identities = 7/37 (18%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 4 PPSGAIGVSNNRTSVVITWSSPP--YDGGCMITGYVV 38
P A + + T +++ W+ P + I G+ +
Sbjct: 7 GPHIAYTEAVSDTQIMLKWTYIPSSNNNTP-IQGFYI 42
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER,
receptor tyrosine kinase mertk, FN3 domain, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 124
Score = 30.9 bits (70), Expect = 0.13
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 8/44 (18%)
Query: 3 DPPSGA-----IGVSNNRTSVVITWSSPPYD--GGCMITGYVVE 39
PS A + ++ + +V I W PP G + GY +
Sbjct: 16 GAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDG-ELVGYRIS 58
>2dlh_A Receptor-type tyrosine-protein phosphatase delta;
protein-tyrosine phosphatase delta, R-PTP-delta,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 121
Score = 30.8 bits (70), Expect = 0.14
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 4 PPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVV 38
P + T++++ W P G I GY V
Sbjct: 21 APRDVQARMLSSTTILVQWKEPEEPNG-QIQGYRV 54
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 124
Score = 30.7 bits (70), Expect = 0.14
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 5/51 (9%)
Query: 4 PPSGAIGVSNNRTSVVITWSSPPYD---GGCMITGYVVEMKAGTQPWVELS 51
PP N S+ ++W PP G ITGY + + T+ +
Sbjct: 31 PPQNVSLEVVNSRSIKVSWLPPPSGTQNG--FITGYKIRHRKTTRRGEMET 79
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein,
adnect antitumor, drug, engineered binding protein;
HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Length = 114
Score = 30.6 bits (69), Expect = 0.16
Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 6/53 (11%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE--MKAGTQPWVELS 51
+ D P V+ TS++I+W S Y + G P E +
Sbjct: 3 VSDVPRDLEVVAATPTSLLISWDSGRGS----YQYYRITYGETGGNSPVQEFT 51
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 31.9 bits (73), Expect = 0.16
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 89 IKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITYVLL 143
+KI DFGLA+ I D V +P PE + I+SD+WS G++ + +
Sbjct: 211 VKICDFGLARDIMSDSNYVV--RGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268
Query: 144 S-GLSPFMG 151
S G++P+ G
Sbjct: 269 SLGVNPYPG 277
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like
modifier, S NOVO protein; 2.40A {Artificial gene}
Length = 97
Score = 30.1 bits (68), Expect = 0.16
Identities = 7/39 (17%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 39
+ P+ V+ TS++I+W + ++ Y +
Sbjct: 4 VSSVPTKLEVVAATPTSLLISWDASS--SS--VSYYRIT 38
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 105
Score = 30.1 bits (68), Expect = 0.22
Identities = 8/39 (20%), Positives = 14/39 (35%), Gaps = 4/39 (10%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 39
PPS S S+ ++W+ P + Y +
Sbjct: 7 GRSPPSNLALASETPDSLQVSWTPPLGR----VLHYWLT 41
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus
design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Length = 98
Score = 29.7 bits (67), Expect = 0.23
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Query: 3 DPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 39
D P+ + TS+ ++W+ P ITGY +
Sbjct: 3 DAPTDLQVTNVTDTSITVSWTPPSAT----ITGYRIT 35
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein,
leukocyte antigen related, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 134
Score = 30.4 bits (69), Expect = 0.25
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 4 PPSGAIGVSNNRTSVVITWSSPPYDG--GCMITGYVV 38
PP + VS T+V ++W PP D G +IT Y V
Sbjct: 21 PPQKVMCVSMGSTTVRVSWVPPPADSRNG-VITQYSV 56
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy,
decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo
sapiens} PDB: 3lb6_D*
Length = 380
Score = 30.9 bits (69), Expect = 0.31
Identities = 10/69 (14%), Positives = 19/69 (27%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSERLFESTERG 61
P PP + + + WS P Y +E++ V + T +
Sbjct: 238 PLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDDTTLVTATVENETYTLKT 297
Query: 62 LGHHSLVTV 70
+
Sbjct: 298 TNETRQLCF 306
Score = 27.5 bits (60), Expect = 4.9
Identities = 6/43 (13%), Positives = 12/43 (27%), Gaps = 3/43 (6%)
Query: 2 PDPPSG-AIGVSNNRTSVVITWSSPPYD--GGCMITGYVVEMK 41
+PP I + + W P Y ++ +
Sbjct: 32 VNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYR 74
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo
sapiens} SCOP: b.1.2.1
Length = 94
Score = 29.3 bits (66), Expect = 0.37
Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 4/37 (10%)
Query: 3 DPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 39
D P G + S+ I W SP ++ Y V
Sbjct: 3 DRPKGLAFTDVDVDSIKIAWESPQ----GQVSRYRVT 35
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding
homology region (CHR), cell MEMB disease mutation,
glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo
sapiens}
Length = 483
Score = 31.0 bits (69), Expect = 0.40
Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDG--GCMITGYVV-EMKAGTQPWVELSE 52
PD P +++ ++ +W+ G T Y + E +G ++ +E
Sbjct: 282 PDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGKYVRLKRAE 335
Score = 29.8 bits (66), Expect = 0.83
Identities = 9/47 (19%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPW 47
P P+ N T+V ++W P + + +E+K
Sbjct: 381 YPHTPTSFKVKDINSTAVKLSW-HLPGNFAKINFLCEIEIKKSNSVQ 426
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII
domain, dscaml1 protein, structural genomics; NMR {Homo
sapiens} SCOP: b.1.2.1
Length = 122
Score = 29.3 bits (66), Expect = 0.54
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 9/43 (20%)
Query: 3 DPPSGA---IGVSN-NRTSVVITWSSPPYD---GGCMITGYVV 38
P G + + S+ +TW +P + G +I GY +
Sbjct: 13 AAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNG--VIRGYQI 53
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein;
NMR {Homo sapiens} PDB: 2h45_A
Length = 95
Score = 28.6 bits (64), Expect = 0.63
Identities = 7/38 (18%), Positives = 14/38 (36%), Gaps = 4/38 (10%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 39
+ +S V++W S ++G+ VE
Sbjct: 6 HLVATSESVTEITASSFVVSWVSASDT----VSGFRVE 39
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 108
Score = 28.5 bits (64), Expect = 0.64
Identities = 7/39 (17%), Positives = 13/39 (33%), Gaps = 6/39 (15%)
Query: 2 PDPPSGAIGVSN-NRTSVVITWSSPPYDGGCMITGYVVE 39
PP +G S+ + + + W P + V
Sbjct: 8 LAPPRH-LGFSDVSHDAARVFWEGAPRP----VRLVRVT 41
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin
type-III, beta-N-acetylglucosaminidase, cohesin,
hydrolase; 1.80A {Clostridium perfringens}
Length = 238
Score = 29.5 bits (65), Expect = 0.86
Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 39
+P N+ +V +TW+ P G + GY++
Sbjct: 151 VNPVRDFKASEINKKNVTVTWTEPETTEG--LEGYILY 186
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 119
Score = 28.5 bits (64), Expect = 0.97
Identities = 3/35 (8%), Positives = 11/35 (31%), Gaps = 3/35 (8%)
Query: 4 PPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVV 38
P+ + + + + W ++ Y +
Sbjct: 21 APTEVGVKVLSSSEISVHWEHVLEK---IVESYQI 52
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 132
Score = 28.5 bits (64), Expect = 0.98
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 10/65 (15%)
Query: 3 DPPSGA----IGVSNNRTSVVITWSSPPYD---GGCMITGYVVEMKAGTQPWVELSERLF 55
D PS A N S++I W P G ITGY + + ++ +++E L
Sbjct: 16 DVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNG--QITGYKIRYRKASRKS-DVTETLV 72
Query: 56 ESTER 60
T+
Sbjct: 73 SGTQL 77
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 29.1 bits (66), Expect = 1.1
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 14/68 (20%)
Query: 90 KIIDFGLAQKINPD----H-PPRVLFGTPEFIPPEIINYEPIG---IESDMWSIGVITYV 141
KI DFGLA + + R++ GT ++ PE + G +SD++S GV+
Sbjct: 173 KISDFGLA-RASEKFAQTVMTSRIV-GTTAYMAPEALR----GEITPKSDIYSFGVVLLE 226
Query: 142 LLSGLSPF 149
+++GL
Sbjct: 227 IITGLPAV 234
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R,
cytokine, glycoprotein, IM response, membrane,
phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens}
PDB: 3bpn_C*
Length = 314
Score = 29.1 bits (64), Expect = 1.2
Identities = 18/112 (16%), Positives = 28/112 (25%), Gaps = 24/112 (21%)
Query: 2 PDPPSGAIGVSN-NRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPW------------- 47
PP + VS N +V+ TW+ P Y
Sbjct: 3 TQPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQDKKIAPETRRSIEVPL 62
Query: 48 ---VELSERLFESTERGLGHHSLVTV-------DPKILPENIMCVSRTSHHI 89
+ L ST LV DP+ + C+ ++
Sbjct: 63 NERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYM 114
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK,
fibronectin type III (FN3) domain, structural genomics,
NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Length = 107
Score = 27.8 bits (62), Expect = 1.2
Identities = 7/48 (14%), Positives = 14/48 (29%), Gaps = 2/48 (4%)
Query: 2 PDPPSGA--IGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPW 47
+ SG V + +TW+ Y + + + W
Sbjct: 8 AESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEW 55
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 28.4 bits (62), Expect = 1.3
Identities = 7/33 (21%), Positives = 14/33 (42%), Gaps = 7/33 (21%)
Query: 190 KRKEKRLTAKQCLSHLWIAQKDSSP--GVNKII 220
K+ K+L + L + DS+P + +
Sbjct: 19 KQALKKLQ-----ASLKLYADDSAPALAIKATM 46
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 113
Score = 27.9 bits (62), Expect = 1.3
Identities = 9/49 (18%), Positives = 13/49 (26%), Gaps = 3/49 (6%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGG---CMITGYVVEMKAGTQPW 47
PP G + ++ ITW+ Y V K
Sbjct: 9 MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPAN 57
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 104
Score = 27.9 bits (62), Expect = 1.4
Identities = 8/38 (21%), Positives = 12/38 (31%), Gaps = 5/38 (13%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 39
PP + +V +TW T Y+V
Sbjct: 9 LPPPRALTLAAVTPRTVHLTWQPSA-----GATHYLVR 41
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface
receptor complex LIFR LIF, cytokine RE cytokine
complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Length = 488
Score = 28.8 bits (63), Expect = 1.6
Identities = 6/38 (15%), Positives = 11/38 (28%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 39
D +NN TW +P + ++
Sbjct: 4 DDDDKDLKCTTNNMRVWDCTWPAPLGVSPGTVKDICIK 41
Score = 27.2 bits (59), Expect = 5.2
Identities = 8/47 (17%), Positives = 14/47 (29%), Gaps = 1/47 (2%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPW 47
P P+ N T V +W P + + +E+
Sbjct: 386 APHDPTSLKVKDINSTVVTFSW-YLPGNFTKINLLCQIEICKANSKK 431
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating
enzyme, structural genomics consortium ,SGC; 1.80A {Homo
sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Length = 186
Score = 28.4 bits (63), Expect = 1.8
Identities = 13/80 (16%), Positives = 29/80 (36%), Gaps = 5/80 (6%)
Query: 102 PDHPPRVLFGTPEFIPPEIINYEPIGIE---SDMWS-IGVITYVLLSGLSPFM-GENDSE 156
P PP V P ++ + +E WS I V++ + + G+ +
Sbjct: 102 PFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQ 161
Query: 157 TFANITRAEFDFDDEAFEAL 176
AN + +++ ++
Sbjct: 162 FGANKNQYNLARAQQSYNSI 181
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex;
HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1
b.1.2.1
Length = 247
Score = 28.2 bits (62), Expect = 1.9
Identities = 8/52 (15%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKA-GTQPWVELS 51
IP P + + + + W++ + ++V+ + W E S
Sbjct: 136 IPWAPENLTLHKLSESQLELNWNNRFLN---HCLEHLVQYRTDWDHSWTEQS 184
Score = 27.1 bits (59), Expect = 5.6
Identities = 12/100 (12%), Positives = 25/100 (25%), Gaps = 4/100 (4%)
Query: 11 VSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSERLFESTERGLGHHSLVTV 70
N + TW S +T + + + S LF L
Sbjct: 46 FVFNVEYMNCTWQSSSEPQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEIT--SGCQLQKK 103
Query: 71 DPKILPENIMCVSRTSHHIKIID--FGLAQKINPDHPPRV 108
+ + ++ + + L + P P +
Sbjct: 104 EIHLYQTFVVQLQDPREPRRQATQMLKLQNLVIPWAPENL 143
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY
docking, cell adhesion, structural protein; NMR {Homo
sapiens}
Length = 201
Score = 28.1 bits (62), Expect = 2.2
Identities = 8/40 (20%), Positives = 16/40 (40%), Gaps = 4/40 (10%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK 41
P + +S V++W S ++G+ VE +
Sbjct: 112 PLVATSESVTEITASSFVVSWVSAS----DTVSGFRVEYE 147
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle,
fibronectin domain, cytokine-cytokine REC complex; HET:
NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB:
3bpl_C* 3qb7_C* 3qaz_C*
Length = 199
Score = 27.8 bits (61), Expect = 2.6
Identities = 8/52 (15%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKA-GTQPWVELS 51
IP P + + + + W++ + ++V+ + W E S
Sbjct: 98 IPWAPENLTLHKLSESQLELNWNNRFLN---HCLEHLVQYRTDWDHSWTEQS 146
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 27.9 bits (63), Expect = 2.6
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 12/67 (17%)
Query: 90 KIIDFGLAQKINPD---H-PPRVLFGTPEFIPPEIINYEPIGI---ESDMWSIGVITYVL 142
+ DFGLA K+ H V GT I PE Y G ++D++ GV+ L
Sbjct: 174 VVGDFGLA-KLMDYKDTHVTTAVR-GTIGHIAPE---YLSTGKSSEKTDVFGYGVMLLEL 228
Query: 143 LSGLSPF 149
++G F
Sbjct: 229 ITGQRAF 235
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold,
fibronectin type III, NG-CAM related cell adhesion
molecule, structural genomics; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 125
Score = 27.0 bits (60), Expect = 2.8
Identities = 8/38 (21%), Positives = 11/38 (28%), Gaps = 5/38 (13%)
Query: 4 PPSGAIGVSNNRTSVVITWSSPPYD---GGCMITGYVV 38
P N T + W P G + GY +
Sbjct: 17 APGNVRVNVVNSTLAEVHWDPVPLKSIRG--HLQGYRI 52
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96;
HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A*
2o1w_A 2o1t_A
Length = 666
Score = 27.6 bits (62), Expect = 3.6
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 148 PFMGENDSETFANITRAEFDFD--DEAFEALSEDAKDFISSLLVKRKEKRLTAK 199
+ E D + F N+ + FD ++ E+ K+F LL K+K L K
Sbjct: 490 QALPEFDGKRFQNVAKEGVKFDESEKTKESREAIEKEF-EPLLNWMKDKALKDK 542
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic
cytokine, cytokine receptor class 1, complex
(cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1
b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Length = 227
Score = 27.4 bits (60), Expect = 4.3
Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Query: 2 PDPPSG-AIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPW 47
D P G +++ VV+ W PP Y V++ AG
Sbjct: 122 LDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAG 168
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural
genomics, riken structural genomics/proteomics
initiative, RSGI, unknown function; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 137
Score = 26.9 bits (59), Expect = 4.4
Identities = 7/39 (17%), Positives = 11/39 (28%)
Query: 1 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 39
+ + +VV+TWS P V
Sbjct: 17 LLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVP 55
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de
novo; 2.50A {Synthetic}
Length = 98
Score = 26.3 bits (58), Expect = 4.7
Identities = 6/45 (13%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Query: 3 DPPSGAIGVSN-NRTSVVITWSSPPYDGGCMITGYVVEMKAGTQP 46
P + VS S+ ++W++P ++++ + +
Sbjct: 3 PAPKN-LVVSEVTEDSLRLSWTAPDAA----FDSFMIQYQESEKV 42
>3cxe_C Granulocyte-macrophage colony-stimulating factor subunit alpha;
GM-CSF, receptor complex, dodecamer, disease mutation,
glyco membrane; HET: NAG BMA; 3.30A {Homo sapiens}
Length = 120
Score = 26.2 bits (57), Expect = 5.4
Identities = 11/73 (15%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Query: 3 DPPSGAIGVSNNRTSVVITWSSPP--YDGGCMITGYVVEMKAGTQPWVELSERLFESTER 60
+PPS + V N T ++ W P + Y +++ + + S +
Sbjct: 19 NPPSN-VTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDL 77
Query: 61 GLGHHSLVTVDPK 73
++ + +P+
Sbjct: 78 EN-RYNFPSSEPR 89
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 26.9 bits (60), Expect = 5.6
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 27/89 (30%)
Query: 89 IKIIDFGLAQKINPDH---------PPRVLFGTPEFIPPEIINYEPIGIESDMWSIGV-- 137
KI DFGL++ + P R ++ E +NY SD+WS GV
Sbjct: 181 AKIADFGLSR--GQEVYVKKTMGRLPVR-------WMAIESLNYSVYTTNSDVWSYGVLL 231
Query: 138 ---ITYVLLSGLSPFMGENDSETFANITR 163
++ G +P+ G +E + + +
Sbjct: 232 WEIVSL----GGTPYCGMTCAELYEKLPQ 256
>2wnv_C C1Q chain C, complement C1Q subcomponent subunit C; immune system,
secreted, collagen, recognition, disulfide bond, innate
immunity; HET: NAG; 1.25A {Homo sapiens} PDB: 2jg8_C
2wnu_C* 2jg9_C* 1pk6_C
Length = 131
Score = 26.0 bits (57), Expect = 7.0
Identities = 5/45 (11%), Positives = 17/45 (37%)
Query: 8 AIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSE 52
+ + + VV G ++ ++ G + W+ +++
Sbjct: 65 CVLLYRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWLAVND 109
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin
domain, cytokine-cytokine REC complex; HET: NAG; 2.30A
{Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B*
2erj_B*
Length = 214
Score = 26.3 bits (57), Expect = 9.3
Identities = 8/69 (11%), Positives = 16/69 (23%), Gaps = 5/69 (7%)
Query: 2 PDPPSGAIGVSNNRTSVVITWSSPP---YDGGCMITGYVVEMKAGTQPWVELSERLFEST 58
P V I+W Y + + + W E +
Sbjct: 106 LMAPISLQVVHVETHRCNISWEISQASHYFERHLE--FEARTLSPGHTWEEAPLLTLKQK 163
Query: 59 ERGLGHHSL 67
+ + +L
Sbjct: 164 QEWICLETL 172
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.136 0.417
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,941,701
Number of extensions: 237318
Number of successful extensions: 1389
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1003
Number of HSP's successfully gapped: 432
Length of query: 239
Length of database: 6,701,793
Length adjustment: 91
Effective length of query: 148
Effective length of database: 4,160,982
Effective search space: 615825336
Effective search space used: 615825336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (25.5 bits)