RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy10960
(341 letters)
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase;
HET: TFC; 2.70A {Trichoplusia NI}
Length = 551
Score = 310 bits (796), Expect = e-102
Identities = 89/220 (40%), Positives = 135/220 (61%), Gaps = 13/220 (5%)
Query: 134 ISTMTEIIINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFRPPQAHPGWEGT 193
I + E+++ TE G I+G++R N + SF+G+PYA P+G+LRF+ Q W+
Sbjct: 2 IPSTEEVVVRTESGWIRGLKRR-AEGNKSYASFRGVPYAKQPLGELRFKELQPLEPWQDE 60
Query: 194 LDATKEGGICVQNDVMLGMFE---SGSDDCLYLNVYSP---------CITAGANKAVMVF 241
LDAT+EG +C Q DV+ G S+ C++ N++ P A V+VF
Sbjct: 61 LDATQEGPVCQQTDVLYGRIMRPRGMSEACIHANIHVPYYALPRDAADKNRFAGLPVLVF 120
Query: 242 VHGGGFTFGHPAEVFYGPDWLVAKDVVLVAIHYRVNIFGFLNLGLEECPGNVGLRDIMAS 301
+HGGGF FG +GP++LV+KDV+++ +YR+N++GFL+L PGN GLRD++
Sbjct: 121 IHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNSTSVPGNAGLRDMVTL 180
Query: 302 LQWVQANISDFGGNPNNVTLFGESAGAASIHYLLMAPSTR 341
L+WVQ N FGG P++VTL G+SAGAA+ H L ++ +
Sbjct: 181 LKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAAD 220
Score = 64.3 bits (157), Expect = 1e-11
Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 3 EIIINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFR 46
E+++ TE G I+G++R N + SF+G+PYA P+G+LRF+
Sbjct: 7 EVVVRTESGWIRGLKRR-AEGNKSYASFRGVPYAKQPLGELRFK 49
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase;
HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP:
c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A*
1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A*
2hrq_A* 3k9b_A* 1k4y_A*
Length = 542
Score = 293 bits (751), Expect = 1e-95
Identities = 81/214 (37%), Positives = 117/214 (54%), Gaps = 14/214 (6%)
Query: 141 IINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFRPPQAHPGWEGTLDATKEG 200
+++T G++ G S + F GIP+A PP+G LRF PPQ W +AT
Sbjct: 7 VVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNATSYP 66
Query: 201 GICVQNDVMLGMFE------------SGSDDCLYLNVYSP-CITAGANKAVMVFVHGGGF 247
+C Q+ + S+DCLYLN+Y+P +T VMV++HGGG
Sbjct: 67 PMCTQDPKAGQLLSELFTNRKENIPLKLSEDCLYLNIYTPADLTKKNRLPVMVWIHGGGL 126
Query: 248 TFGHPAEVFYGPDWLVAKDVVLVAIHYRVNIFGFLNLGLEECPGNVGLRDIMASLQWVQA 307
G A + G ++VV+V I YR+ I+GF + G E GN G D +A+L+WVQ
Sbjct: 127 MVGA-ASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQD 185
Query: 308 NISDFGGNPNNVTLFGESAGAASIHYLLMAPSTR 341
NI+ FGGNP +VT+FGESAG S+ L+++P +
Sbjct: 186 NIASFGGNPGSVTIFGESAGGESVSVLVLSPLAK 219
Score = 65.1 bits (159), Expect = 8e-12
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 5 IINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFR 46
+++T G++ G S + F GIP+A PP+G LRF
Sbjct: 7 VVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFT 48
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod
glycosylated protein, hydrolase; HET: NAG FUC SCK SCU
P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A*
1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A*
2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A*
2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Length = 543
Score = 291 bits (748), Expect = 4e-95
Identities = 88/216 (40%), Positives = 125/216 (57%), Gaps = 14/216 (6%)
Query: 138 TEIIINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFRPPQAHPGWEGTLDAT 197
++++ GQ++G++ + +F GIP+A PPVG RF PP+ W G LDAT
Sbjct: 6 PQLLVRVRGGQLRGIRL--KAPGGPVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDAT 63
Query: 198 KEGGICVQN-DVMLGMFE---------SGSDDCLYLNVYSPCITAGANKAVMVFVHGGGF 247
+C Q D + FE S+DCLYLNV++P + V+++++GGGF
Sbjct: 64 TFQNVCYQYVDTLYPGFEGTEMWNPNRELSEDCLYLNVWTPYPRPASPTPVLIWIYGGGF 123
Query: 248 TFGHPAEVFYGPDWLVAK-DVVLVAIHYRVNIFGFLNL-GLEECPGNVGLRDIMASLQWV 305
G + Y +L VLV+++YRV FGFL L G E PGNVGL D +LQWV
Sbjct: 124 YSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWV 183
Query: 306 QANISDFGGNPNNVTLFGESAGAASIHYLLMAPSTR 341
Q NI+ FGG+P +VTLFGESAGAAS+ +++ +R
Sbjct: 184 QENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSR 219
Score = 63.6 bits (155), Expect = 3e-11
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 2 TEIIINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFR 46
++++ GQ++G++ + +F GIP+A PPVG RF
Sbjct: 6 PQLLVRVRGGQLRGIRL--KAPGGPVSAFLGIPFAEPPVGSRRFM 48
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase,
neurotransmitter cleavage, catalytic triad, alpha/beta
hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP:
c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A*
1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A
1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A*
1vxr_A* ...
Length = 537
Score = 288 bits (738), Expect = 1e-93
Identities = 85/216 (39%), Positives = 125/216 (57%), Gaps = 15/216 (6%)
Query: 138 TEIIINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFRPPQAHPGWEGTLDAT 197
+E+++NT+ G++ G + + ++ + +F GIP+A PPVG++RFR P+ W G +A+
Sbjct: 4 SELLVNTKSGKVMGTRV--PVLSSHISAFLGIPFAEPPVGNMRFRRPEPKKPWSGVWNAS 61
Query: 198 KEGGICVQND----------VMLGMFESGSDDCLYLNVYSPCITAGANKAVMVFVHGGGF 247
C Q M S+DCLYLN++ P + VMV+++GGGF
Sbjct: 62 TYPNNCQQYVDEQFPGFSGSEMWNPNREMSEDCLYLNIWVP-SPRPKSTTVMVWIYGGGF 120
Query: 248 TFGHPAEVFYGPDWLVA-KDVVLVAIHYRVNIFGFLNL-GLEECPGNVGLRDIMASLQWV 305
G Y +L ++VVLV++ YRV FGFL L G +E PGNVGL D +LQWV
Sbjct: 121 YSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMALQWV 180
Query: 306 QANISDFGGNPNNVTLFGESAGAASIHYLLMAPSTR 341
NI FGG+P VT+FGESAG AS+ +++P +R
Sbjct: 181 HDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSR 216
Score = 62.4 bits (152), Expect = 5e-11
Identities = 17/45 (37%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
Query: 2 TEIIINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFR 46
+E+++NT+ G++ G + + ++ + +F GIP+A PPVG++RFR
Sbjct: 4 SELLVNTKSGKVMGTRV--PVLSSHISAFLGIPFAEPPVGNMRFR 46
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC
MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A*
1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A*
3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A*
2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Length = 529
Score = 285 bits (732), Expect = 7e-93
Identities = 91/215 (42%), Positives = 127/215 (59%), Gaps = 15/215 (6%)
Query: 139 EIIINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFRPPQAHPGWEGTLDATK 198
+III T+ G+++G+Q T+ + +F GIPYA PP+G LRF+ PQ+ W +ATK
Sbjct: 3 DIIIATKNGKVRGMQL--TVFGGTVTAFLGIPYAQPPLGRLRFKKPQSLTKWSDIWNATK 60
Query: 199 EGGICVQNDVMLGMFESG----------SDDCLYLNVYSPCITAGANKAVMVFVHGGGFT 248
C QN G S+DCLYLNV+ P N V+++++GGGF
Sbjct: 61 YANSCCQNIDQSFPGFHGSEMWNPNTDLSEDCLYLNVWIP-APKPKNATVLIWIYGGGFQ 119
Query: 249 FGHPAEVFYGPDWLVA-KDVVLVAIHYRVNIFGFLNL-GLEECPGNVGLRDIMASLQWVQ 306
G + Y +L + V++V+++YRV GFL L G E PGN+GL D +LQWVQ
Sbjct: 120 TGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQ 179
Query: 307 ANISDFGGNPNNVTLFGESAGAASIHYLLMAPSTR 341
NI+ FGGNP +VTLFGESAGAAS+ L++P +
Sbjct: 180 KNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSH 214
Score = 62.0 bits (151), Expect = 7e-11
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 3 EIIINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFR 46
+III T+ G+++G+Q T+ + +F GIPYA PP+G LRF+
Sbjct: 3 DIIIATKNGKVRGMQL--TVFGGTVTAFLGIPYAQPPLGRLRFK 44
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A
{Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A
1jmy_A
Length = 579
Score = 285 bits (731), Expect = 3e-92
Identities = 73/210 (34%), Positives = 113/210 (53%), Gaps = 13/210 (6%)
Query: 141 IINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFRPPQAHPGWEGTLDATKEG 200
+ TE G ++GV + +L ++ F+GIP+AA P P+ HPGW+GTL A
Sbjct: 5 SVYTEGGFVEGVNKKLSLFGDSVDIFKGIPFAAAPKA---LEKPERHPGWQGTLKAKSFK 61
Query: 201 GICVQNDVMLGMFESGSDDCLYLNVYSPCI--TAGANKAVMVFVHGGGFTFGHPAEVFYG 258
C+Q + G++DCLYLN++ P + VM++++GG F G +
Sbjct: 62 KRCLQATLTQDSTY-GNEDCLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFL 120
Query: 259 PDWL-------VAKDVVLVAIHYRVNIFGFLNLGLEECPGNVGLRDIMASLQWVQANISD 311
++L +V++V +YRV GFL+ G PGN GL D ++ WV+ NI
Sbjct: 121 SNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEA 180
Query: 312 FGGNPNNVTLFGESAGAASIHYLLMAPSTR 341
FGG+P+ +TLFGESAG AS+ ++P +
Sbjct: 181 FGGDPDQITLFGESAGGASVSLQTLSPYNK 210
Score = 53.9 bits (130), Expect = 3e-08
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 5 IINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFR 46
+ TE G ++GV + +L ++ F+GIP+AA P
Sbjct: 5 SVYTEGGFVEGVNKKLSLFGDSVDIFKGIPFAAAPKA---LE 43
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase
directed evolution; 1.50A {Bacillus subtilis} SCOP:
c.69.1.1 PDB: 1c7j_A 1c7i_A
Length = 489
Score = 280 bits (719), Expect = 2e-91
Identities = 91/212 (42%), Positives = 128/212 (60%), Gaps = 14/212 (6%)
Query: 137 MTEIIINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFRPPQAHPGWEGTLDA 196
MT I+ T+ G++KG + ++ ++GIPYA PPVG RF+ P+ WE LDA
Sbjct: 1 MTHQIVTTQYGKVKGTTENG------VHKWKGIPYAKPPVGQWRFKAPEPPEVWEDVLDA 54
Query: 197 TKEGGICVQNDVMLGMF----ESGSDDCLYLNVYSPCITAGANKAVMVFVHGGGFTFGHP 252
T G IC Q +L + S+DCLY+NV++P T N VMV++HGG F G
Sbjct: 55 TAYGPICPQPSDLLSLSYTELPRQSEDCLYVNVFAP-DTPSQNLPVMVWIHGGAFYLGAG 113
Query: 253 AEVFYGPDWLVAK-DVVLVAIHYRVNIFGFLNL--GLEECPGNVGLRDIMASLQWVQANI 309
+E Y L A+ +V++V ++YR+ FGFL+L E N+GL D A+L+WV+ NI
Sbjct: 114 SEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENI 173
Query: 310 SDFGGNPNNVTLFGESAGAASIHYLLMAPSTR 341
S FGG+P+NVT+FGESAG SI LL P+ +
Sbjct: 174 SAFGGDPDNVTVFGESAGGMSIAALLAMPAAK 205
Score = 62.3 bits (152), Expect = 7e-11
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 1 MTEIIINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFR 46
MT I+ T+ G++KG + ++ ++GIPYA PPVG RF+
Sbjct: 1 MTHQIVTTQYGKVKGTTENG------VHKWKGIPYAKPPVGQWRFK 40
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase,
cell adhesion, cell J glycoprotein, membrane,
postsynaptic cell membrane; HET: NAG; 1.80A {Rattus
norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A*
2vh8_A 3bl8_A*
Length = 574
Score = 274 bits (702), Expect = 6e-88
Identities = 72/226 (31%), Positives = 119/226 (52%), Gaps = 27/226 (11%)
Query: 138 TEIIINTELGQIKGVQRS-NTLTNAALYSFQGIPYAAPPVGDLRFRPPQAHPGWEGTLDA 196
+ ++ T G+I+G+++ N + F G+PYAAPP G+ RF+PP+ W +A
Sbjct: 9 VDPLVTTNFGKIRGIKKELNNEILGPVIQFLGVPYAAPPTGEHRFQPPEPPSPWSDIRNA 68
Query: 197 TKEGGICVQN-------------------DVMLGMFESGSDDCLYLNVYSP----CITAG 233
T+ +C QN DV+ + S+DCLYLN+Y P +G
Sbjct: 69 TQFAPVCPQNIIDGRLPEVMLPVWFTNNLDVVSSYVQDQSEDCLYLNIYVPTEDDIRDSG 128
Query: 234 ANKAVMVFVHGGGFTFGHPAEVFYGPDWLVA-KDVVLVAIHYRVNIFGFLNLGLEECPGN 292
K VMV++HGG + G Y L + +V+++ ++YR+ + GFL+ G + GN
Sbjct: 129 GPKPVMVYIHGGSYMEGTGN--LYDGSVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGN 186
Query: 293 VGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGAASIHYLLMAP 338
GL D++ +L+W NI FGG+P +T+FG AG + ++ L ++
Sbjct: 187 YGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSH 232
Score = 60.9 bits (148), Expect = 2e-10
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 2 TEIIINTELGQIKGVQRS-NTLTNAALYSFQGIPYAAPPVGDLRFR 46
+ ++ T G+I+G+++ N + F G+PYAAPP G+ RF+
Sbjct: 9 VDPLVTTNFGKIRGIKKELNNEILGPVIQFLGVPYAAPPTGEHRFQ 54
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase,
hydrolase; 1.58A {Geobacillus stearothermophilus} PDB:
2ogs_A
Length = 498
Score = 271 bits (695), Expect = 9e-88
Identities = 84/217 (38%), Positives = 128/217 (58%), Gaps = 19/217 (8%)
Query: 137 MTEIIINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFRPPQAHPGWEGTLDA 196
M ++ T G+++G N ++ ++GIPYA PVG+ RF PP+ W+G +A
Sbjct: 1 MERTVVETRYGRLRGE------MNEGVFVWKGIPYAKAPVGERRFLPPEPPDAWDGVREA 54
Query: 197 TKEGGICVQN------DVMLGMFESGSDDCLYLNVYSPCITAGANKAVMVFVHGGGFTFG 250
T G + +Q ++ M E+ S+D LYLN++SP G + V+ ++HGG F FG
Sbjct: 55 TSFGPVVMQPSDPIFSGLLGRMSEAPSEDGLYLNIWSPA-ADGKKRPVLFWIHGGAFLFG 113
Query: 251 HPAEVFYGPDWLVAK-DVVLVAIHYRVNIFGFLNLG-----LEECPGNVGLRDIMASLQW 304
+ +Y DVV+V I+YR+N+FGFL+LG GN+G+ D +A+L+W
Sbjct: 114 SGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNLGILDQVAALRW 173
Query: 305 VQANISDFGGNPNNVTLFGESAGAASIHYLLMAPSTR 341
V+ NI+ FGG+P+N+T+FGESAGAAS+ LL P
Sbjct: 174 VKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEAS 210
Score = 60.0 bits (146), Expect = 3e-10
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Query: 1 MTEIIINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFR 46
M ++ T G+++G N ++ ++GIPYA PVG+ RF
Sbjct: 1 MERTVVETRYGRLRGE------MNEGVFVWKGIPYAKAPVGERRFL 40
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse,
membrane, nerve, muscle neurotransmitter degradation,
glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila
melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Length = 585
Score = 265 bits (679), Expect = 2e-84
Identities = 84/255 (32%), Positives = 121/255 (47%), Gaps = 52/255 (20%)
Query: 137 MTEIIINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFRPPQAHPGWEGTLDA 196
+ +++ T G ++G T+ ++ + GIPYA PPV DLRFR P W G LDA
Sbjct: 2 IDRLVVQTSSGPVRGRSV--TVQGREVHVYTGIPYAKPPVEDLRFRKPVPAEPWHGVLDA 59
Query: 197 TKEGGICVQNDVMLGMFESG----------SDDCLYLNVYSP------------------ 228
T CVQ SG S+DCLY+NV++P
Sbjct: 60 TGLSATCVQERYEYFPGFSGEEIWNPNTNVSEDCLYINVWAPAKARLRHGRGANGGEHPN 119
Query: 229 --------------CITAGANKAVMVFVHGGGFTFGHPAEVFYGPDWLVAK-DVVLVAIH 273
++++++GGGF G Y D + A +V++ +
Sbjct: 120 GKQADTDHLIHNGNPQNTTNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQ 179
Query: 274 YRVNIFGFLNLGL-------EECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESA 326
YRV FGFL+L EE PGNVGL D +++W++ N FGGNP +TLFGESA
Sbjct: 180 YRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLKDNAHAFGGNPEWMTLFGESA 239
Query: 327 GAASIHYLLMAPSTR 341
G++S++ LM+P TR
Sbjct: 240 GSSSVNAQLMSPVTR 254
Score = 60.6 bits (147), Expect = 2e-10
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 1 MTEIIINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFR 46
+ +++ T G ++G T+ ++ + GIPYA PPV DLRFR
Sbjct: 2 IDRLVVQTSSGPVRGRSV--TVQGREVHVYTGIPYAKPPVEDLRFR 45
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H;
HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Length = 522
Score = 251 bits (643), Expect = 1e-79
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 14/207 (6%)
Query: 141 IINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFRPPQAHPGWEGTLDATKEG 200
+IN + +GV+ + F G+ YA+PP+GDLRFR PQ P + AT+ G
Sbjct: 12 VINLGYARYQGVRLEAGVD-----EFLGMRYASPPIGDLRFRAPQDPPANQTLQSATEYG 66
Query: 201 GICVQNDVMLGMFESGSDDCLYLNVYSPC-ITAGANKAVMVFVHGGGFTFGHPAEVFYGP 259
IC+ D S+DCL++NV+ P T+ + V +F+ GGG+ A Y
Sbjct: 67 PICIGLD-EEESPGDISEDCLFINVFKPSTATSQSKLPVWLFIQGGGYAENSNAN--YNG 123
Query: 260 DWLVA---KDVVLVAIHYRVNIFGFLNLG--LEECPGNVGLRDIMASLQWVQANISDFGG 314
++ +V V +YRV GFL + N GL D +L+WV+ I FGG
Sbjct: 124 TQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQFGG 183
Query: 315 NPNNVTLFGESAGAASIHYLLMAPSTR 341
+P+++ + G SAGA S+ Y L A +
Sbjct: 184 DPDHIVIHGVSAGAGSVAYHLSAYGGK 210
Score = 55.1 bits (133), Expect = 1e-08
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 5 IINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFR 46
+IN + +GV+ + F G+ YA+PP+GDLRFR
Sbjct: 12 VINLGYARYQGVRLEAGVD-----EFLGMRYASPPIGDLRFR 48
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester
acylh hydrolase; HET: NAG F23; 1.40A {Candida
cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A*
1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A*
1gz7_A*
Length = 534
Score = 236 bits (605), Expect = 5e-74
Identities = 74/227 (32%), Positives = 104/227 (45%), Gaps = 36/227 (15%)
Query: 141 IINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFRPPQAHPGWEGTLDATKEG 200
G + +F GIP+A PPVG+LRF+ P + G T G
Sbjct: 3 TAKLANGDTITGLNAIINE-----AFLGIPFAEPPVGNLRFKDPVPYSGSLNGQKFTSYG 57
Query: 201 GICVQNDV--------------------MLGMFESGSDDCLYLNVYSP-CITAGANKAVM 239
C+Q + + S+DCL +NV P AGAN VM
Sbjct: 58 PSCMQQNPEGTFEENLGKTALDLVMQSKVFQAVLPQSEDCLTINVVRPPGTKAGANLPVM 117
Query: 240 VFVHGGGFTFGHPAEVFYGPDWLVA------KDVVLVAIHYRVNIFGFLNLG--LEECPG 291
+++ GGGF G P + P +V K ++ VA++YRV +GFL E G
Sbjct: 118 LWIFGGGFEIGSPT--IFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSG 175
Query: 292 NVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGAASIHYLLMAP 338
N GL+D +QWV NI+ FGG+P+ VT+FGESAG+ S+ L+
Sbjct: 176 NAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWN 222
Score = 49.4 bits (118), Expect = 9e-07
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Query: 5 IINTELGQIKGVQRSNTLTNAALYSFQGIPYAAPPVGDLRFR 46
G + +F GIP+A PPVG+LRF+
Sbjct: 3 TAKLANGDTITGLNAIINE-----AFLGIPFAEPPVGNLRFK 39
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A
{Galactomyces geotrichum} SCOP: c.69.1.17
Length = 544
Score = 233 bits (596), Expect = 2e-72
Identities = 73/220 (33%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 158 LTNAALYSFQGIPYAAPPVGDLRFRPPQAHPGWEGTLDATKEGGICVQNDVMLGMFESG- 216
+ + +F+GIP+A PP+ DLRF+ PQ G L A C+Q D +
Sbjct: 16 VLEGKVDTFKGIPFADPPLNDLRFKHPQPFTGSYQGLKANDFSPACMQLDPGNSLTLLDK 75
Query: 217 --------------------------SDDCLYLNVYSP-CITAGANKAVMVFVHGGGFTF 249
++DCLYLNV+ P A VMV+++GG F +
Sbjct: 76 ALGLAKVIPEEFRGPLYDMAKGTVSMNEDCLYLNVFRPAGTKPDAKLPVMVWIYGGAFVY 135
Query: 250 GHPAEVFYGPDWLVA------KDVVLVAIHYRVNIFGFLNLGLEECPG--NVGLRDIMAS 301
G A Y + V + VV V+I+YR FGFL G N GL D
Sbjct: 136 GSSA--AYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKG 193
Query: 302 LQWVQANISDFGGNPNNVTLFGESAGAASIHYLLMAPSTR 341
L+WV NI++FGG+P+ V +FGESAGA S+ + L+A
Sbjct: 194 LEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGD 233
Score = 48.6 bits (116), Expect = 2e-06
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 22 LTNAALYSFQGIPYAAPPVGDLRFR 46
+ + +F+GIP+A PP+ DLRF+
Sbjct: 16 VLEGKVDTFKGIPFADPPLNDLRFK 40
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2,
protein structure initiative; 3.20A {Lactococcus lactis
subsp}
Length = 276
Score = 66.4 bits (162), Expect = 9e-13
Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 8/116 (6%)
Query: 216 GSDDCLYLNVY---SPCITAGANKAVMVFVHGGGFTFGHPAEVFYGPDWLVAKDVVLVAI 272
+D +++ Y +P ++ GGG+ E +A+ ++ +
Sbjct: 20 SLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLL 79
Query: 273 HYRVNIFGFLNLGLEECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGA 328
+Y V G L + L ++ A + N ++ NP V L G SAG
Sbjct: 80 NYTVMNKGTNYNFLSQN-----LEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGG 130
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural
genomics, joint center structural genomics, JCSG; HET:
EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Length = 277
Score = 64.5 bits (157), Expect = 4e-12
Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 7/108 (6%)
Query: 221 LYLNVYSPCITAGANKAVMVFVHGGGFTFGHPAEVFYGPDWLVAKDVVLVAIHYRVNIFG 280
Y + +M+ GGGFT+ E ++A + V ++Y++
Sbjct: 20 AYWLDQISDFETAVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQL---- 75
Query: 281 FLNLGLEECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGA 328
+ ++ L+ + A++ W+ S + + L G SAG
Sbjct: 76 ---IVGDQSVYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGG 120
>3h04_A Uncharacterized protein; protein with unknown function, structural
genomics, MCSG, PS protein structure initiative; 1.90A
{Staphylococcus aureus subsp}
Length = 275
Score = 63.7 bits (155), Expect = 9e-12
Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 16/108 (14%)
Query: 221 LYLNVYSPCITAGANKAVMVFVHGGGFTFGHPAEVFYGPDWLVAKDVVLVAIHYRVNIFG 280
L + K V+V++HGGG FG ++ ++ + L+ + YR+
Sbjct: 16 LPYTIIKA--KNQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEHYDLIQLSYRL---- 69
Query: 281 FLNLGLEECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGA 328
L E + + D+ AS +Q+ + + FG S+GA
Sbjct: 70 -----LPEVSLDCIIEDVYASFDAIQSQY-----SNCPIFTFGRSSGA 107
>3bjr_A Putative carboxylesterase; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Length = 283
Score = 59.5 bits (144), Expect = 3e-10
Identities = 18/109 (16%), Positives = 40/109 (36%), Gaps = 8/109 (7%)
Query: 221 LYLNVYSPCITAG-ANKAVMVFVHGGGFTFGHPAEVFYGPDWLVAKDVVLVAIHYRVNIF 279
L ++ P A N ++ V GG +T A+ + Y +
Sbjct: 34 LTGYLHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTL--- 90
Query: 280 GFLNLGLEECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGA 328
L ++ G + D+ ++ ++ + +++ +P +T G S G
Sbjct: 91 ----LTDQQPLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGG 135
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A,
alpha/beta hydrolase family; 1.85A {Bacillus subtilis}
SCOP: c.69.1.2
Length = 361
Score = 59.8 bits (145), Expect = 3e-10
Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 16/111 (14%)
Query: 223 LNVYSPCITAGANKAVMVFVHGGGFTFGHPAEVFYGP--DWLVAKDVVLVAIHYRVNIFG 280
L+V+ P +V+ HGGG T + L A V+V + +R
Sbjct: 97 LHVFRPA-GVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFR----- 150
Query: 281 FLNLGLEECPGN---VGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGA 328
+ G+ D +A++ WV + G + V + GES G
Sbjct: 151 ---NAWTAEGHHPFPSGVEDCLAAVLWVDEHRESLGLSG--VVVQGESGGG 196
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine
structural genomics, center for structural genomics of
INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella
typhimurium}
Length = 326
Score = 58.8 bits (143), Expect = 5e-10
Identities = 22/116 (18%), Positives = 43/116 (37%), Gaps = 35/116 (30%)
Query: 225 VYSPCITAGANKAVMVFVHGGGFTFG----HPAEVFYGPDWLVAK-----DVVLVAIHYR 275
+YSP ++A + ++HGGGF G H D ++ ++ I Y
Sbjct: 79 LYSP---QPTSQATLYYLHGGGFILGNLDTH--------DRIMRLLARYTGCTVIGIDYS 127
Query: 276 V---NIFGFLNLGLEECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGA 328
+ + P + + +A + + ++ N + G+SAGA
Sbjct: 128 LSPQARY----------P--QAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGA 171
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold,
hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A
{Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Length = 303
Score = 57.2 bits (138), Expect = 2e-09
Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 18/120 (15%)
Query: 223 LNVYSPCITAGANKAVMVFVHGGGFTFGHPAEVFYGPDWLVAKDVVLVAIHYRVNIFGFL 282
++V+ + VFVHGG + + LV + + + Y +
Sbjct: 70 VDVFYS-EKTTNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNL------ 122
Query: 283 NLGLEECPGNV---GLRDIMASLQWVQANISDFGGNPNNVTLFGESAGAASIHYLLMAPS 339
CP + L W+ +++T G AGA + +LM P+
Sbjct: 123 ------CPQVTLEQLMTQFTHFLNWIFDYTEMTK--VSSLTFAGHXAGAHLLAQILMRPN 174
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold,
structural genomics, joint cente structural genomics,
JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Length = 262
Score = 56.8 bits (137), Expect = 2e-09
Identities = 20/123 (16%), Positives = 38/123 (30%), Gaps = 18/123 (14%)
Query: 216 GSDDCLYLNVYSPCITAGANKAVMVFVHGGGFTFGHPAEVFYGPDWLVAKDVVLVAIHYR 275
G D +++ P G + VFVHGG + + + ++K + Y
Sbjct: 46 GEGDRHKFDLFLP---EGTPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYE 102
Query: 276 VNIFGFLNLGLEECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGAASIHYLL 335
+ E + + I ++ + L G SAG + +L
Sbjct: 103 L---------CPEVRISEITQQISQAVTAAAKE------IDGPIVLAGHSAGGHLVARML 147
Query: 336 MAP 338
Sbjct: 148 DPE 150
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family
38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP:
b.30.5.6
Length = 282
Score = 57.0 bits (137), Expect = 2e-09
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 36 AAPPVGDLRFRLHRRLLYDDNKGVREPLDETPYGQGLVTRGTHIVQLTDLRRGARRYRLR 95
++ G L +HRRLL DD +GV EPL++ G GL RG H+V L A R+RL+
Sbjct: 200 SSLRDGSLELMVHRRLLKDDARGVGEPLNKE--GSGLWVRGRHLVLLDKKETAAARHRLQ 257
Query: 96 NVQNVFRPWITVSKAAVANS 115
V P + +++ A
Sbjct: 258 AEMEVLAPQVVLAQGGGARY 277
>1vkh_A Putative serine hydrolase; structural genomics, joint center
structural genomics, JCSG, protein structure initiative,
PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae}
SCOP: c.69.1.32
Length = 273
Score = 55.8 bits (134), Expect = 4e-09
Identities = 18/132 (13%), Positives = 37/132 (28%), Gaps = 28/132 (21%)
Query: 216 GSDDCLYLNVYSPCITAGANKAVMVFVHGGGFTFGHPAEVFYGP------DWLVAKDVVL 269
+ + + ++++HGG + + V
Sbjct: 23 DITLFNKTLTFQE--ISQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQ 80
Query: 270 VAIHYRVNIFGFLNLGLEECPGNV---GLRDIMASLQWVQANISDFGGNPNNVTLFGESA 326
+I YR+ P L D ++++ + N+ + G S
Sbjct: 81 YSIEYRL------------SPEITNPRNLYDAVSNITRLVKE-----KGLTNINMVGHSV 123
Query: 327 GAASIHYLLMAP 338
GA I +L A
Sbjct: 124 GATFIWQILAAL 135
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural
genomics CEN infectious disease, tuberculosis, O LIPW,
heroin esterase; 1.75A {Mycobacterium marinum}
Length = 317
Score = 55.0 bits (133), Expect = 9e-09
Identities = 27/110 (24%), Positives = 40/110 (36%), Gaps = 23/110 (20%)
Query: 225 VYSPCITAGANKAVMVFVHGGGFTFGHPAEVFYGPDWLVAK-----DVVLVAIHYRVNIF 279
+Y A V+V+ H GGF G+ + +V++ YR
Sbjct: 77 IYRA---APTPAPVVVYCHAGGFALGNLDTD----HRQCLELARRARCAVVSVDYR---- 125
Query: 280 GFLNLGLE-ECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGA 328
L E P L D + L WV N + G + + + G SAGA
Sbjct: 126 ------LAPEHPYPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGA 169
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP:
c.69.1.2 PDB: 1lzk_A
Length = 323
Score = 54.6 bits (132), Expect = 1e-08
Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 21/110 (19%)
Query: 225 VYSPCITAGANKAVMVFVHGGGFTFGHPAEVFYGPDWLVAK-----DVVLVAIHYRVNIF 279
+P V++++HGGGF G D + + + YR
Sbjct: 69 FVTP-DNTAGPVPVLLWIHGGGFAIGTAESS----DPFCVEVARELGFAVANVEYR---- 119
Query: 280 GFLNLGLE-ECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGA 328
L E + D A+L ++ A+ + G +P+ + + G+SAG
Sbjct: 120 ------LAPETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGG 163
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO
PSI-2, protein structure initiative, midwest center for
STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Length = 274
Score = 54.1 bits (130), Expect = 1e-08
Identities = 20/120 (16%), Positives = 37/120 (30%), Gaps = 25/120 (20%)
Query: 214 ESGSDDCLYLNVYSPCITAGANKAVMVFVHGGGFTFG----HPAEVFYGPDWLVAKDVVL 269
+ + +Y +V++HGGG +G P E+ + +
Sbjct: 8 NQTLANGATVTIYPT---TTEPTNYVVYLHGGGMIYGTKSDLPEELKE---LFTSNGYTV 61
Query: 270 VAIHYRVNIFGFLNLGLE-ECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGA 328
+A+ Y L + LR + + Q + + L G SAG
Sbjct: 62 LALDYL----------LAPNTKIDHILRTLTETFQLLNEE----IIQNQSFGLCGRSAGG 107
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A
{Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A
1qz3_A
Length = 310
Score = 54.2 bits (131), Expect = 1e-08
Identities = 25/116 (21%), Positives = 43/116 (37%), Gaps = 33/116 (28%)
Query: 225 VYSPCITAGANKAVMVFVHGGGFTFG----HPAEVFYGPDWLVAK-----DVVLVAIHYR 275
+Y P +V+ HGG + G H D + V+ ++ YR
Sbjct: 64 MYRP-EGVEPPYPALVYYHGGSWVVGDLETH--------DPVCRVLAKDGRAVVFSVDYR 114
Query: 276 V---NIFGFLNLGLEECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGA 328
+ + F P + D +LQW+ +DF +P + + G+SAG
Sbjct: 115 LAPEHKF----------P--AAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGG 158
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme,
hydrolase, HSL, alpha/beta hydrolase fold; 2.3A
{Uncultured archaeon}
Length = 311
Score = 53.8 bits (130), Expect = 2e-08
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 34/116 (29%)
Query: 225 VYSPCITAGANKAVMVFVHGGGFTFG----HPAEVFYGPDWLVAK-----DVVLVAIHYR 275
VY P A +++ HGGGF FG H D + + D V+V++ YR
Sbjct: 64 VYFP--KKAAGLPAVLYYHGGGFVFGSIETH--------DHICRRLSRLSDSVVVSVDYR 113
Query: 276 V---NIFGFLNLGLEECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGA 328
+ F P + D A+L+WV + G +P+ + + G+SAG
Sbjct: 114 LAPEYKF----------P--TAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGG 157
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary
alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A
3zwq_A
Length = 313
Score = 53.5 bits (129), Expect = 3e-08
Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 26/112 (23%)
Query: 225 VYSPCITAGANKAVMVFVHGGGFTFGHPAEVFYGPDWLVAK-----DVVLVAIHYRV--- 276
VY P G +V+ HGGGF G D + + V+V++ YR+
Sbjct: 67 VYRP--RDGERLPAVVYYHGGGFVLGSVETH----DHVCRRLANLSGAVVVSVDYRLAPE 120
Query: 277 NIFGFLNLGLEECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGA 328
+ F P + D + +WV N G + + + G+SAG
Sbjct: 121 HKF----------P--AAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGG 160
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE;
2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Length = 311
Score = 53.4 bits (129), Expect = 3e-08
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 36/116 (31%)
Query: 225 VYSPCITAGANKAVMVFVHGGGFTFG----HPAEVFYGPDWLVAK-----DVVLVAIHYR 275
VY + V+V+ HGGGF H D L + + +V++ YR
Sbjct: 72 VYQQ----KPDSPVLVYYHGGGFVICSIESH--------DALCRRIARLSNSTVVSVDYR 119
Query: 276 V---NIFGFLNLGLEECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGA 328
+ + F P + D + +WV N + +P+ + + G+SAG
Sbjct: 120 LAPEHKF----------P--AAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGG 163
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia
eriantha} PDB: 2o7v_A
Length = 338
Score = 52.4 bits (126), Expect = 7e-08
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 23/115 (20%)
Query: 225 VYSPCITAGANKA--VMVFVHGGGFTFGHPAEVFYGPD----WLVAK-DVVLVAIHYRVN 277
++ P + ++V+ HGGGF A + + VV+ ++ YR
Sbjct: 70 LFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIF--HDFCCEMAVHAGVVIASVDYR-- 125
Query: 278 IFGFLNLGLE-ECPGNVGLRDIMASLQWVQANISDF---GGNPNNVTLFGESAGA 328
L E P D M +LQW++ + ++ + +N + GESAG
Sbjct: 126 ------LAPEHRLP--AAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGG 172
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase,
gibberellin signaling pathway, hydrolase, nucleus,
hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp}
PDB: 3ed1_A*
Length = 365
Score = 49.3 bits (118), Expect = 7e-07
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 20/99 (20%)
Query: 238 VMVFVHGGGFTFGHPAEVFYGPDWLVAK-----DVVLVAIHYRVNIFGFLNLGLE-ECPG 291
V++F HGG F + Y D L + V+V+++YR E P
Sbjct: 114 VIIFFHGGSFVHSSASSTIY--DSLCRRFVKLSKGVVVSVNYR--------RAPEHRYP- 162
Query: 292 NVGLRDIMASLQWVQAN--ISDFGGNPNNVTLFGESAGA 328
D +L+WV + + G V L G+S+G
Sbjct: 163 -CAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGG 200
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic,
dimer, archaea, R267G, hydro; 1.65A {Sulfolobus
tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Length = 323
Score = 49.2 bits (118), Expect = 8e-07
Identities = 29/114 (25%), Positives = 41/114 (35%), Gaps = 31/114 (27%)
Query: 225 VYSPCITAGANKAVMVFVHGGGFTFG----HPAEVFYGPDWLVAK-----DVVLVAIHYR 275
VY P V+V+ HGGGF G + D L V +++ YR
Sbjct: 81 VYYP--KTQGPYGVLVYYHGGGFVLGDIESY--------DPLCRAITNSCQCVTISVDYR 130
Query: 276 VNIFGFLNLGLE-ECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGA 328
L E + D +L+WV N F G + + G+SAG
Sbjct: 131 ----------LAPENKFPAAVVDSFDALKWVYNNSEKFNG-KYGIAVGGDSAGG 173
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor,
gibberellin, gibberellin signaling pathway, hydrolase,
nucleus, receptor, developmental protein; HET: GA3;
1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Length = 351
Score = 47.8 bits (114), Expect = 2e-06
Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 20/99 (20%)
Query: 238 VMVFVHGGGFTFGHPAEVFYGPDWLVAK-----DVVLVAIHYRVNIFGFLNLGLE-ECPG 291
V++F HGG F Y D L + V+V+++YR E P
Sbjct: 115 VILFFHGGSFAHSSANSAIY--DTLCRRLVGLCKCVVVSVNYR--------RAPENPYP- 163
Query: 292 NVGLRDIMASLQWVQAN--ISDFGGNPNNVTLFGESAGA 328
D +L WV + + + ++ L G+S+G
Sbjct: 164 -CAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGG 201
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured
bacterium} PDB: 3dnm_A
Length = 322
Score = 42.3 bits (100), Expect = 1e-04
Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 28/106 (26%)
Query: 231 TAGANKAVMVFVHGGGFTFGHPAEVFYGPDWLVAK-----DVVLVAIHYRV---NIFGFL 282
T GA A +++ HGGG+ G P+ L + L ++ YR+ N F
Sbjct: 75 TDGAGAAHILYFHGGGYISGSPSTH----LVLTTQLAKQSSATLWSLDYRLAPENPF--- 127
Query: 283 NLGLEECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGA 328
P + D +A+ + + G+ + + + G+SAG
Sbjct: 128 -------PA--AVDDCVAAYRALLKT----AGSADRIIIAGDSAGG 160
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase,
golgi apparatus, membrane, signal-anchor, transmembrane;
HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1
b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A*
3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A*
1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A*
2alw_A* 2f18_A* ...
Length = 1045
Score = 40.3 bits (93), Expect = 8e-04
Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 5/63 (7%)
Query: 35 YAAPPVGDLRFRLHRRLLYDDNKGVREPLDETPYGQGLVTRGTHIVQLTDLRRGARRYRL 94
++ G+L RRL DD +G+ + + + + + L + R +L
Sbjct: 854 GSSLASGELEIMQDRRLASDDERGLGQGVLDN-----KPVLHIYRLVLEKVNNCVRPSKL 908
Query: 95 RNV 97
Sbjct: 909 HPA 911
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured
bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A*
3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Length = 322
Score = 39.2 bits (92), Expect = 0.001
Identities = 19/99 (19%), Positives = 40/99 (40%), Gaps = 28/99 (28%)
Query: 238 VMVFVHGGGFTFGHPAEVFYGPDWLVAK-----DVVLVAIHYRV---NIFGFLNLGLEEC 289
++++HGGG+ G +V + + + YR+ + F
Sbjct: 82 AILYLHGGGYVMGSINTH----RSMVGEISRASQAAALLLDYRLAPEHPF---------- 127
Query: 290 PGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGA 328
P + D +A+ +W+ G P ++++ G+SAG
Sbjct: 128 PA--AVEDGVAAYRWLLDQ----GFKPQHLSISGDSAGG 160
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus
subsp}
Length = 326
Score = 38.1 bits (89), Expect = 0.002
Identities = 14/102 (13%), Positives = 29/102 (28%), Gaps = 23/102 (22%)
Query: 232 AGANKAVMVFVHGGGFTFGHPAEVFYGPDWLVAK-----DVVLVAIHYRVNIFGFLNLGL 286
++++HGG F+ L+ K +V Y
Sbjct: 92 RHQIDKKILYIHGGFNALQPSP--FH--WRLLDKITLSTLYEVVLPIYPK---------T 138
Query: 287 EECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGA 328
E + + I + + + NV + G+ +G
Sbjct: 139 PEFHIDDTFQAIQRVYDQLVSEVG-----HQNVVVMGDGSGG 175
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 34.6 bits (79), Expect = 0.059
Identities = 50/311 (16%), Positives = 81/311 (26%), Gaps = 143/311 (45%)
Query: 52 LYDDNKGVREPLDE------TPYGQGLVTRGTHIVQLTDLRRGARRYRLRNVQNVFRPWI 105
LY +K ++ + YG + IV N P
Sbjct: 1635 LYKTSKAAQDVWNRADNHFKDTYGFSI----LDIVI----------------NN---P-- 1669
Query: 106 TVSKAAVANSGEFKISAKTNSYLRDNTYISTMTEIIINTELGQIKGVQRSNTLTNAALYS 165
+ GE +R+N Y + + E I++ G ++ +
Sbjct: 1670 --VNLTIHFGGE------KGKRIREN-YSAMIFETIVD-------GKLKTEKI------- 1706
Query: 166 FQGIPYAAPPVGDLRFRPPQAHPGWEGTLDAT------------------KEGGICVQND 207
F+ I + FR +G L AT K G+ +
Sbjct: 1707 FKEINEHST---SYTFRSE------KGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADA 1757
Query: 208 VM----LGMFESGSDDCLYLNVYSPCITAGANKAVMVFVHGGGFTFGHPAEVFYGPDWLV 263
LG E Y+ A A+ A +
Sbjct: 1758 TFAGHSLG--E-----------YA----ALASLA-------DVMSI-------------- 1779
Query: 264 AKDVV-LVAIHYR---------VNIFGFLNLGLEEC-PGNVGLRDIMASLQWVQANISDF 312
+ +V +V YR + G N G+ PG V +LQ+V +
Sbjct: 1780 -ESLVEVV--FYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKR 1836
Query: 313 GG------NPN 317
G N N
Sbjct: 1837 TGWLVEIVNYN 1847
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga
maritima} PDB: 3doi_A
Length = 380
Score = 33.5 bits (76), Expect = 0.087
Identities = 18/113 (15%), Positives = 43/113 (38%), Gaps = 11/113 (9%)
Query: 238 VMVFVHGGG---------FTFGHPAEVFYGPDWLVAKDVVLVAIHYRVNIFGFLNLGLEE 288
++VF+HG G A V+ P + V ++A N + L +
Sbjct: 176 LVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPN-SSWSTLFTDR 234
Query: 289 CPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGA-ASIHYLLMAPST 340
+ ++A ++ ++ + ++ + N + + G S G + ++ P
Sbjct: 235 ENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPEL 287
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 33.3 bits (75), Expect = 0.13
Identities = 27/157 (17%), Positives = 47/157 (29%), Gaps = 51/157 (32%)
Query: 42 DLRFRLHRRLL--------YDDNKGVREPLDETPYGQGLVTRGTHIVQ------------ 81
+ + LHR ++ +D + + LD+ Y + G H+
Sbjct: 440 ENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFY-SHI---GHHLKNIEHPERMTLFRM 495
Query: 82 -LTDLR------------RGARRYRLRNVQNV--FRPWITVSKAA----VANSGEFKISA 122
D R A L +Q + ++P+I + V +F
Sbjct: 496 VFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKI 555
Query: 123 KTNSYLRDNTYISTMTEIIINTELGQI-----KGVQR 154
+ N T + I + E I K VQR
Sbjct: 556 EENLICSKYTDL---LRIALMAEDEAIFEEAHKQVQR 589
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase,
putative lipase; HET: CME CSO; 1.90A {Saccharomyces
cerevisiae} PDB: 2y6v_A*
Length = 398
Score = 31.3 bits (70), Expect = 0.48
Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 19/132 (14%)
Query: 221 LYLNVYSPC----ITAGANKAVMVFVHGGGFTFGHPAEVFYGPDW--LVAKDVVLVAIHY 274
L +VY+ + A + +VF+HG G V + LVA D
Sbjct: 33 LTYDVYTSAERQRRSRTATRLNLVFLHGSGM----SKVV-WEYYLPRLVAADAEGNYAID 87
Query: 275 RVNIFGFLNLGLEECPGNVGLRDIMAS-------LQWVQANISDFGGNPNNVTLFGESAG 327
+V + +N G L L+ + +P + G S G
Sbjct: 88 KVLLIDQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMG 147
Query: 328 A-ASIHYLLMAP 338
++ ++ P
Sbjct: 148 GFQALACDVLQP 159
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine
esterase; 2.20A {Homo sapiens}
Length = 342
Score = 30.8 bits (70), Expect = 0.52
Identities = 30/129 (23%), Positives = 47/129 (36%), Gaps = 31/129 (24%)
Query: 221 LYLNVYSPCITAGANKAVMVFVHGGG---FTFGHPAEVFYGPDWLVAKDVVLVAIHYRVN 277
L+ + P G KA++ HG G + A L+ D+++ A +
Sbjct: 48 LFCRYWKP---TGTPKALIFVSHGAGEHSGRYEELAR------MLMGLDLLVFAHDHV-- 96
Query: 278 IFGFLNLGL-EECPGNVG-----LRDIMASLQWVQANISDFGGNPNNVTLFGESAGAA-S 330
G G E V +RD++ + +Q D+ G P V L G S G A +
Sbjct: 97 --GH---GQSEGERMVVSDFHVFVRDVLQHVDSMQK---DYPGLP--VFLLGHSMGGAIA 146
Query: 331 IHYLLMAPS 339
I P
Sbjct: 147 ILTAAERPG 155
>2zbc_A 83AA long hypothetical transcriptional regulator; SARD; 1.90A
{Sulfolobus tokodaii}
Length = 83
Score = 28.8 bits (65), Expect = 0.53
Identities = 8/57 (14%), Positives = 19/57 (33%), Gaps = 14/57 (24%)
Query: 115 SGEF----KISAKTNSYLRDNTYISTMTEIIINTELGQIKGVQRSNTLTNAALYSFQ 167
G + K+ A + L+D + + ++ V+ + T+ S
Sbjct: 35 YGVYDIVVKVEADSMDKLKD----------FVTNTIRKLPKVRSTLTMIIVEGKSLV 81
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold,
2-arachidonyl-glycerol, M associated, hydrolase,
hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A
{Homo sapiens} PDB: 3jw8_A 3jwe_A*
Length = 303
Score = 30.7 bits (70), Expect = 0.62
Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 31/129 (24%)
Query: 221 LYLNVYSPCITAGANKAVMVFVHGGG---FTFGHPAEVFYGPDWLVAKDVVLVAIHYRVN 277
L+ ++P G KA++ HG G + A L+ D+++ A +
Sbjct: 30 LFCRYWAP---TGTPKALIFVSHGAGEHSGRYEELAR------MLMGLDLLVFAHDHV-- 78
Query: 278 IFGFLNLGL-EECPGNVG-----LRDIMASLQWVQANISDFGGNPNNVTLFGESAGAA-S 330
G G E V +RD++ + +Q D+ G P V L G S G A +
Sbjct: 79 --GH---GQSEGERMVVSDFHVFVRDVLQHVDSMQK---DYPGLP--VFLLGHSMGGAIA 128
Query: 331 IHYLLMAPS 339
I P
Sbjct: 129 ILTAAERPG 137
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha
sandwich, PSI, protein structure initiative; 1.50A
{Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A
3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Length = 318
Score = 30.5 bits (69), Expect = 0.75
Identities = 10/105 (9%), Positives = 29/105 (27%), Gaps = 16/105 (15%)
Query: 238 VMVFVHGGGFTFGHPAEVFYGPDWLVAKDVVLVAIHYR-------------VNIFGFLNL 284
+V HG ++ + + R + G++
Sbjct: 84 AIVKYHGYNASYDGE---IHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTK 140
Query: 285 GLEECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGAA 329
G+ + + +++ ++ S + + + G S G
Sbjct: 141 GILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGG 185
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics,
JOIN for structural genomics, JCSG; 2.69A {Xanthomonas
campestris PV}
Length = 290
Score = 30.2 bits (68), Expect = 0.93
Identities = 17/103 (16%), Positives = 31/103 (30%), Gaps = 22/103 (21%)
Query: 234 ANKAVMVFVHGGGFTFGHPAEVFYGPDWLVAKDVVLVAIHYRVNIFG-------FLNLGL 286
++FVHG G G V + + R G ++
Sbjct: 26 TGMPGVLFVHGWG---GSQHHSLVRAREAVGLGCICMTFDLR----GHEGYASMRQSVTR 78
Query: 287 EECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGAA 329
+ L DI A+ + S + +++ + G S G
Sbjct: 79 AQ-----NLDDIKAAYDQL---ASLPYVDAHSIAVVGLSYGGY 113
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta
propeller, hydrolase, oligop SIZE selectivity; HET: GOL;
1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A*
1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Length = 582
Score = 30.5 bits (69), Expect = 0.96
Identities = 22/105 (20%), Positives = 38/105 (36%), Gaps = 22/105 (20%)
Query: 232 AGANKAVMVFVHGGGFTFGHPAEVFYGPD--WLVAKDVVLVAIHYRVNIFG-------FL 282
A +V VHGG F + + L A +V +YR G +
Sbjct: 356 APTPGPTVVLVHGGPFAEDSDS---WDTFAASLAAAGFHVVMPNYR----GSTGYGEEWR 408
Query: 283 NLGLEECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAG 327
+ + P L D+ A+ +W + + G + + + G S G
Sbjct: 409 LKIIGD-PCGGELEDVSAAARWARES-----GLASELYIMGYSYG 447
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 1.60A {Thermus thermophilus} SCOP:
c.69.1.27
Length = 238
Score = 28.9 bits (64), Expect = 1.8
Identities = 18/113 (15%), Positives = 31/113 (27%), Gaps = 6/113 (5%)
Query: 230 ITAGANKAVMVFVHGGGFTFGHPAEVFYGPDWLVAKDVVLVAIHYRV--NIFGFLNLGLE 287
A KA+++ +HG G + + +L+A G
Sbjct: 18 RIPEAPKALLLALHGLQ---GSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKS 74
Query: 288 ECPGNVGLRDIMASLQWVQANISDFGGNPNN-VTLFGESAGAASIHYLLMAPS 339
R + + + + + L G S GA H LL
Sbjct: 75 PRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGF 127
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine
hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo
sapiens} SCOP: c.69.1.14
Length = 232
Score = 29.0 bits (65), Expect = 2.0
Identities = 22/128 (17%), Positives = 42/128 (32%), Gaps = 28/128 (21%)
Query: 231 TAGANKAVMVFVHGGGFTFGHPAEVFYGPDW------LVAKDVVLVA-----IHYRVNI- 278
A A ++F+HG G T G W + + + + +N+
Sbjct: 18 AARKATAAVIFLHGLGDT---------GHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMN 68
Query: 279 ------FGFLNLGLEECPGNVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGAA-SI 331
F + L + G++ +++ + G N + L G S G A S+
Sbjct: 69 VAMPSWFDIIGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSL 128
Query: 332 HYLLMAPS 339
+ L
Sbjct: 129 YTALTTQQ 136
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1
interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Length = 210
Score = 28.4 bits (63), Expect = 2.5
Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 11/108 (10%)
Query: 232 AGANKAVMVFVHGGGFTFGHPAEVFYGPDWLVAKDVVLVAIHYRVNIFGFLNLGLEECPG 291
+G + ++ +HG F+ +E + L L YR LG +
Sbjct: 28 SGQARFSVLLLHGIRFS----SETWQNLGTLHR----LAQAGYRAVAIDLPGLGHSKEAA 79
Query: 292 NVGLRDIMASLQWVQANISDFGGNPNNVTLFGESAGAA-SIHYLLMAP 338
+A ++ A + P + S S+ +L
Sbjct: 80 APAPIGELAPGSFLAAVVDALELGP--PVVISPSLSGMYSLPFLTAPG 125
>2cvi_A 75AA long hypothetical regulatory protein ASNC; structural
genomics, unknown function; 1.50A {Pyrococcus
horikoshii} PDB: 2z4p_A 2e1a_A
Length = 83
Score = 26.8 bits (60), Expect = 2.8
Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 14/48 (29%)
Query: 115 SGEF----KISAKTNSYLRDNTYISTMTEIIINTELGQIKGVQRSNTL 158
GE+ K+ T L I ++ ++ +Q ++T+
Sbjct: 35 YGEYDLIVKVETDTLKDLDQ----------FITEKIRKMPEIQMTSTM 72
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron
aquisition, structural genomics, PSI-2, protein
structure initiative; HET: CIT; 1.80A {Shigella flexneri
2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A*
3c8h_A 3mga_A*
Length = 403
Score = 28.8 bits (64), Expect = 2.9
Identities = 18/122 (14%), Positives = 35/122 (28%), Gaps = 17/122 (13%)
Query: 225 VYSPCITAGANKAVMVFVHGGGF-TFGHPAEVFYGPDWLVAKD----VVLVAIHYRVNIF 279
+++ + + V + G + V L + V V I
Sbjct: 186 IFTTGDVTAEERPLAVLLDGEFWAQSMPVWPVL---TSLTHRQQLPPAVYVLIDA----- 237
Query: 280 GFLNLGLEECPGNVGLRDIMAS--LQWVQANISDFGGNPNNVTLFGESAGA-ASIHYLLM 336
E P N + L V+ F + + G+S G ++++ L
Sbjct: 238 IDTTHRAHELPCNADFWLAVQQELLPLVKVIAP-FSDRADRTVVAGQSFGGLSALYAGLH 296
Query: 337 AP 338
P
Sbjct: 297 WP 298
>2djw_A Probable transcriptional regulator, ASNC family; structural
genomics, thermus thermophilus HB8, NPPSFA; 2.40A
{Thermus thermophilus}
Length = 92
Score = 26.8 bits (60), Expect = 3.8
Identities = 9/48 (18%), Positives = 19/48 (39%), Gaps = 14/48 (29%)
Query: 115 SGEF----KISAKTNSYLRDNTYISTMTEIIINTELGQIKGVQRSNTL 158
+G + + K L D ++ + ++GV+R+ TL
Sbjct: 35 TGPYDLVALVRLKDVEELDD----------VVTQGILSLEGVERTETL 72
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct
initiative, midwest center for structural genomics,
MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP:
c.69.1.14
Length = 226
Score = 27.9 bits (62), Expect = 4.9
Identities = 19/122 (15%), Positives = 37/122 (30%), Gaps = 29/122 (23%)
Query: 232 AGANKAVMVFVHGGG------FTFGHPAEVFYGPDWLVAKDVVLVAIHYRVNIFG----F 281
+K V++ +HG G V + ++++ V G F
Sbjct: 34 KDTSKPVLLLLHGTGGNELDLLPLAEI----------VDSEASVLSVRGNVLENGMPRFF 83
Query: 282 LNLGLEECPGNVGLRDIMASLQWVQAN----ISDFGGNPNNVTLFGESAGAA-SIHYLLM 336
L G D++ + + ++ + NN+ G S GA + L
Sbjct: 84 RRLA----EGIFDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFH 139
Query: 337 AP 338
Sbjct: 140 YE 141
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7;
2.10A {Thermoanaerobacterium SP}
Length = 346
Score = 27.9 bits (62), Expect = 4.9
Identities = 20/117 (17%), Positives = 35/117 (29%), Gaps = 26/117 (22%)
Query: 232 AGANKA-VMVFVHGGGFTFGHPAEVFYGPDWLVAKDVVLVAIHYR--------------V 276
K ++ HG G + VA +VA+ R
Sbjct: 103 KTEGKHPALIRFHGYSSNSGDWNDKLN----YVAAGFTVVAMDVRGQGGQSQDVGGVTGN 158
Query: 277 NIFGFLNLGLEECPGNVGLR----DIMASLQWVQANISDFGGNPNNVTLFGESAGAA 329
+ G + GL++ N+ R D V ++ + + V + G S G
Sbjct: 159 TLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIV---MNMPEVDEDRVGVMGPSQGGG 212
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL
receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Length = 692
Score = 27.3 bits (60), Expect = 8.8
Identities = 15/81 (18%), Positives = 25/81 (30%), Gaps = 31/81 (38%)
Query: 243 HG-------GGFTFGHPAEVFYGPDWLVAKDVVLVAIHYRVNIFGFLNLGLEECPGNVGL 295
HG G G VAK + ++ RV LN C G +
Sbjct: 226 HGTHLAGVVSGRDAG------------VAKGASMRSL--RV-----LN-----CQGKGTV 261
Query: 296 RDIMASLQWVQANISDFGGNP 316
+ L++++ + P
Sbjct: 262 SGTLIGLEFIRKSQLVQPVGP 282
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.138 0.421
Gapped
Lambda K H
0.267 0.0586 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 5,309,343
Number of extensions: 328868
Number of successful extensions: 752
Number of sequences better than 10.0: 1
Number of HSP's gapped: 661
Number of HSP's successfully gapped: 82
Length of query: 341
Length of database: 6,701,793
Length adjustment: 94
Effective length of query: 247
Effective length of database: 4,077,219
Effective search space: 1007073093
Effective search space used: 1007073093
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.4 bits)