BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10962
(196 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9W385|FRDA_DROME Frataxin homolog, mitochondrial OS=Drosophila melanogaster GN=fh
PE=2 SV=1
Length = 190
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/111 (62%), Positives = 84/111 (75%), Gaps = 3/111 (2%)
Query: 78 YEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQI 137
YE +C++TL++L DYF+ + E + L+ DV Y DGVLTVN G HGTYVINRQTPNKQI
Sbjct: 73 YERVCSDTLDALCDYFEELTENASELQGTDVAYSDGVLTVNLGGQHGTYVINRQTPNKQI 132
Query: 138 WLSSPTSGPKRYDF--DPSRNIWIYKHDNKSLHDLLQEEIVTIVTS-NVDF 185
WLSSPTSGPKRYDF + WIYKH +SLH+LLQ+EI I+ S +VDF
Sbjct: 133 WLSSPTSGPKRYDFVGTVAAGRWIYKHSGQSLHELLQQEIPGILKSQSVDF 183
>sp|O35943|FRDA_MOUSE Frataxin, mitochondrial OS=Mus musculus GN=Fxn PE=1 SV=1
Length = 207
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 95/137 (69%), Gaps = 6/137 (4%)
Query: 60 IHCRNLCSSLTGSISLPE--YEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTV 117
+H RNL +L SL E YE + ETL+SL ++F+ + ++ LE+ DV++GDGVLT+
Sbjct: 73 VHLRNL-GTLDNPSSLDETAYERLAEETLDSLAEFFEDLADKPYTLEDYDVSFGDGVLTI 131
Query: 118 NFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVT 177
G GTYVIN+QTPNKQIWLSSP+SGPKRYD+ +N W+Y HD SLH+LL E+
Sbjct: 132 KLGGDLGTYVINKQTPNKQIWLSSPSSGPKRYDWT-GKN-WVYSHDGVSLHELLARELTK 189
Query: 178 IVTSNVDFYSNCSHSGK 194
+ + +D S+ ++SGK
Sbjct: 190 ALNTKLDL-SSLAYSGK 205
>sp|Q16595|FRDA_HUMAN Frataxin, mitochondrial OS=Homo sapiens GN=FXN PE=1 SV=2
Length = 210
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 92/139 (66%), Gaps = 7/139 (5%)
Query: 60 IHCRNLCSSLT----GSISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVL 115
++ NL S T GS+ YE + ETL+SL ++F+ + ++ E+ DV++G GVL
Sbjct: 73 VYLMNLRKSGTLGHPGSLDETTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVL 132
Query: 116 TVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEI 175
TV G GTYVIN+QTPNKQIWLSSP+SGPKRYD+ +N W+Y HD SLH+LL E+
Sbjct: 133 TVKLGGDLGTYVINKQTPNKQIWLSSPSSGPKRYDWT-GKN-WVYSHDGVSLHELLAAEL 190
Query: 176 VTIVTSNVDFYSNCSHSGK 194
+ + +D S+ ++SGK
Sbjct: 191 TKALKTKLDL-SSLAYSGK 208
>sp|Q05B87|FRDA_BOVIN Frataxin, mitochondrial OS=Bos taurus GN=FXN PE=2 SV=1
Length = 217
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
Query: 70 TGSISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVIN 129
G++ YE + ETL+SL ++F+ + ++ E+ DV++G GVLTV G GTYVIN
Sbjct: 88 AGTLDDTTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGGDLGTYVIN 147
Query: 130 RQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDFYSNC 189
+QTPNKQIWLSSP+SGPKRYD+ RN W+Y HD SLH+LL E+ + + +D S
Sbjct: 148 KQTPNKQIWLSSPSSGPKRYDWT-GRN-WVYSHDGVSLHELLATELTQALKTKLDL-SAL 204
Query: 190 SHSGK 194
++SGK
Sbjct: 205 AYSGK 209
>sp|Q8HXX9|FRDA_MACFA Frataxin, mitochondrial OS=Macaca fascicularis GN=FXN PE=2 SV=1
Length = 210
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 91/139 (65%), Gaps = 7/139 (5%)
Query: 60 IHCRNLCSSLT----GSISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVL 115
++ NL S T GS+ YE + ETL+SL ++F+ + ++ E+ DV++G GVL
Sbjct: 73 VYLMNLRKSGTLGHPGSLDDTTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVL 132
Query: 116 TVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEI 175
TV G GTYVIN+QTPNKQIWLSSP+SGPKRYD +N W+Y HD SLH+LL E+
Sbjct: 133 TVKLGGDLGTYVINKQTPNKQIWLSSPSSGPKRYD-RTGKN-WVYSHDGVSLHELLGAEL 190
Query: 176 VTIVTSNVDFYSNCSHSGK 194
+ + +D S+ ++SGK
Sbjct: 191 TKALKTKLDL-SSLAYSGK 208
>sp|D3ZYW7|FRDA_RAT Frataxin, mitochondrial OS=Rattus norvegicus GN=Fxn PE=1 SV=1
Length = 208
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 109/199 (54%), Gaps = 16/199 (8%)
Query: 3 SCRISSYVSNNVGKCLRQVKCVQSYSRCVCNSNGIIGHGSHRKTLVQSQDNVLNFTG--- 59
+ R S++V N G+ R C + N++ I H + +LN
Sbjct: 17 ASRASAWVRNPRGRE-RIGTCGRRGLHVTANADAI----RHSHLNLHYLGQILNIKKQSV 71
Query: 60 --IHCRNLCSSLTGSISLPE--YEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVL 115
+H RN +L SL E YE + ETL++L ++F+ + ++ L++ DV++GDGVL
Sbjct: 72 CVVHLRN-SGTLGNPSSLDETAYERLAEETLDALAEFFEDLADKPYTLKDYDVSFGDGVL 130
Query: 116 TVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEI 175
T+ G GTYVIN+QTP +W S P SGPKRYD+ +N W+Y HD SLH+LL E+
Sbjct: 131 TIKLGGDLGTYVINKQTPLLYLWFSGPCSGPKRYDW-TGKN-WVYSHDGVSLHELLAREL 188
Query: 176 VTIVTSNVDFYSNCSHSGK 194
+ + +D S+ ++SGK
Sbjct: 189 TEALNTKLDL-SSLAYSGK 206
>sp|Q9TY03|FRDA_CAEEL Frataxin, mitochondrial OS=Caenorhabditis elegans GN=frh-1 PE=2
SV=1
Length = 136
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 68/110 (61%), Gaps = 2/110 (1%)
Query: 77 EYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQ 136
EYE + TLE L+DYFD I + E DV++ GVLTVN GTYVIN+Q+PNKQ
Sbjct: 24 EYETAADSTLERLSDYFDQIADSFPVSEQFDVSHAMGVLTVNVSKSVGTYVINKQSPNKQ 83
Query: 137 IWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSN-VDF 185
IWLSSP SGPKRYD + W Y HD + L LL E I+ + +DF
Sbjct: 84 IWLSSPMSGPKRYDLE-EEGKWTYAHDGEQLDSLLNREFRKILADDRIDF 132
>sp|Q54C45|FRDA_DICDI Frataxin, mitochondrial OS=Dictyostelium discoideum GN=fxn PE=3
SV=1
Length = 193
Score = 90.1 bits (222), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 81 ICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQIWLS 140
I +E E D +++ E NT E +V DGVLT+ GN GTYVIN+QTPN+QIW S
Sbjct: 91 IVDEEFELFVDRLEILSEANT-CEGFEVEGNDGVLTIIVGN-KGTYVINKQTPNRQIWWS 148
Query: 141 SPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTI 178
SP SGPKR+D+D W+ D L LL EI T+
Sbjct: 149 SPLSGPKRFDYDSVEKRWVDNRDGTPLRQLLNSEINTL 186
>sp|Q9ZR07|FRDA_ARATH Frataxin, mitochondrial OS=Arabidopsis thaliana GN=FH PE=2 SV=2
Length = 187
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 6/87 (6%)
Query: 82 CNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQIWLSS 141
N LE + DY D N ++ D+ YG+ VLT+ G+ GTYV+N+QTPN+QIW+SS
Sbjct: 89 INHLLEKIEDYGD-----NVQIDGFDIDYGNEVLTLKLGS-LGTYVLNKQTPNRQIWMSS 142
Query: 142 PTSGPKRYDFDPSRNIWIYKHDNKSLH 168
P SGP R+D+D N WIY+ LH
Sbjct: 143 PVSGPSRFDWDRDANAWIYRRTEAKLH 169
>sp|O74831|FRDA_SCHPO Frataxin homolog, mitochondrial OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1183.03c PE=3 SV=1
Length = 158
Score = 84.0 bits (206), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 71/131 (54%), Gaps = 3/131 (2%)
Query: 56 NFTGIHCRNLCSSL-TGSISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGV 114
N G+ CR G+++ EY + ++TL+ L D F+ ++EE ++ D+ Y +GV
Sbjct: 24 NVFGLRCRYYSQVRHNGALTDLEYHRVADDTLDVLNDTFEDLLEE-VGKKDYDIQYANGV 82
Query: 115 LTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEE 174
+T+ G GTYVIN+Q P QIWLSSP SGPK Y++ W D +L +L E
Sbjct: 83 ITLMLGE-KGTYVINKQPPAHQIWLSSPVSGPKHYEYSLKSKTWCSTRDEGTLLGILSSE 141
Query: 175 IVTIVTSNVDF 185
+ ++F
Sbjct: 142 FSKWFSRPIEF 152
>sp|Q07540|FRDA_YEAST Frataxin homolog, mitochondrial OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YFH1 PE=1 SV=1
Length = 174
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 87 ESLTDYFDVIVEENTHLENA------DVTYGDGVLTVNFGNPHGTYVINRQTPNKQIWLS 140
E DY D +++ L A DV GV+T+ GTYVIN+Q PNKQIWL+
Sbjct: 75 EEADDYLDHLLDSLEELSEAHPDCIPDVELSHGVMTLEIPA-FGTYVINKQPPNKQIWLA 133
Query: 141 SPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSN 182
SP SGP R+D W+ + L D+L EE+ ++ +
Sbjct: 134 SPLSGPNRFDL--LNGEWVSLRNGTKLTDILTEEVEKAISKS 173
>sp|B8GQ85|CYAY_THISH Protein CyaY OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=cyaY PE=3
SV=1
Length = 107
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 82 CNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQIWLSS 141
+TLESL + + E L + D+ DGVLT+ F + G ++NRQ QIWL+S
Sbjct: 10 AEQTLESLLER----MSEFDALADLDMDIIDGVLTLEF-DDGGKLILNRQEAASQIWLAS 64
Query: 142 PTSGPKRYDFDPSRNIWIYKHDNKSLHDLL 171
P GP + +D R+ W+ +SL D L
Sbjct: 65 P-EGPAHFGYDADRDAWLNDRTGESLTDTL 93
>sp|Q8SWI3|FRDA_ENCCU Frataxin, mitosomal OS=Encephalitozoon cuniculi (strain GB-M1)
GN=YFH1 PE=3 SV=1
Length = 118
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 78 YEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQI 137
Y + +ETL L++ D L+ Y DG L + N G Y+ N+Q + QI
Sbjct: 16 YHKLADETLTDLSEQLD------KELDGGYADYKDGNLQIKIDNV-GEYMFNKQPASMQI 68
Query: 138 WLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDFYSNCSHSGKHR 196
W SSP +GP+++D R+ WI N S ++EE+ + +GKH+
Sbjct: 69 WASSPITGPRKFDI-CRRHEWIDLKSNTSFSRYIEEELRRM---------RSKMAGKHK 117
>sp|Q3K4S1|CYAY_PSEPF Protein CyaY OS=Pseudomonas fluorescens (strain Pf0-1) GN=cyaY PE=3
SV=1
Length = 110
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 72 SISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVI-NR 130
S+S + + +ET E L D FD ++ L + D+ GVLTV F N GT +I +R
Sbjct: 2 SLSEARFHDLVDETQEKLEDIFD-----DSDL-DIDMENSAGVLTVKFEN--GTQLIFSR 53
Query: 131 QTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDF 185
Q P +Q+WL++ SG +D+D W+ + L ++L+ + + DF
Sbjct: 54 QEPLRQLWLAA-VSGGFHFDYDEESERWMCDKSEEQLGEMLERIVKQQAGTEFDF 107
>sp|A8GN05|CYAY_RICAH Protein CyaY OS=Rickettsia akari (strain Hartford) GN=cyaY PE=3
SV=1
Length = 101
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 77 EYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQ 136
E+ I + T+ +TD +EE + DV +L N G YVIN+Q+ K+
Sbjct: 5 EFSKIADITIAYITD----TIEEQDKEASIDVDLQGDIL--NLDTDKGIYVINKQSAAKE 58
Query: 137 IWLSSPTSGP 146
IWLSSP SGP
Sbjct: 59 IWLSSPVSGP 68
>sp|B3QSI5|CYAY_CHLT3 Protein CyaY OS=Chloroherpeton thalassium (strain ATCC 35110 /
GB-78) GN=cyaY PE=3 SV=1
Length = 105
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 77 EYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGT-YVINRQTPNK 135
E + +ETLE + D D + ++ E +D G++++ GT Y+++RQ+
Sbjct: 5 EIRIFLDETLEDIQDKLDAMDDDELDFETSD-----GLVSIE--TEDGTKYIVSRQSATN 57
Query: 136 QIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQ 172
QIWL+ P +G K F+ WI +N L+ L+
Sbjct: 58 QIWLAEPINGWK---FNLQDGKWISDKENHELYSFLE 91
>sp|Q1I306|CYAY_PSEE4 Protein CyaY OS=Pseudomonas entomophila (strain L48) GN=cyaY PE=3
SV=1
Length = 110
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 72 SISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQ 131
S+S + + + T ++L D FD E + L D+ GVLTV F N + +RQ
Sbjct: 2 SLSEARFHDLVDATQQALEDLFD---ESDLDL---DMENSAGVLTVKFDNG-SQLIFSRQ 54
Query: 132 TPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDF 185
P +Q+WL+ SG +D+D W+ + + L ++L+ + +DF
Sbjct: 55 EPLRQLWLAD-RSGGFHFDYDEESGKWVCEKTEELLGEMLERIVWERAGEKLDF 107
>sp|Q4UM50|CYAY_RICFE Protein CyaY OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
GN=cyaY PE=3 SV=1
Length = 101
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 77 EYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQ 136
E+ I T+ + D +EE + DV +L N G YVIN+Q+ K+
Sbjct: 5 EFSKIAETTIAYIADK----IEEQDKEASIDVDLQGDIL--NLDTDKGIYVINKQSAAKE 58
Query: 137 IWLSSPTSGPKRYDFDPSR 155
IWLSSP SGP + ++ +
Sbjct: 59 IWLSSPVSGPYHFFYEQGK 77
>sp|A4XNX7|CYAY_PSEMY Protein CyaY OS=Pseudomonas mendocina (strain ymp) GN=cyaY PE=3
SV=1
Length = 110
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 72 SISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQ 131
S+S + + + T +++ D FD ++ L + D+ GVLTV F N + +RQ
Sbjct: 2 SLSEARFHDLVDATQQAVEDIFD-----DSGL-DVDLENSAGVLTVRFDNG-SQLIFSRQ 54
Query: 132 TPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLL 171
P +Q+WL++ SG +D+D + WI ++ L ++L
Sbjct: 55 EPIRQLWLAA-RSGGYHFDYDEAEGRWICDSSDEQLGEML 93
>sp|B1J1U3|CYAY_PSEPW Protein CyaY OS=Pseudomonas putida (strain W619) GN=cyaY PE=3 SV=1
Length = 110
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Query: 72 SISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQ 131
S+S + + + T ++L D FD E L D+ GVLT+ F N + +RQ
Sbjct: 2 SLSEARFHDLVDATQQALEDLFD---ESGLDL---DMENSAGVLTIKFDNG-SQLIFSRQ 54
Query: 132 TPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDF 185
P +Q+WL+ SG +D+D W+ + + L ++L+ + +DF
Sbjct: 55 EPLRQLWLAD-RSGGFHFDYDEESGKWVCEKSEELLGEMLERIVWERAGEKLDF 107
>sp|P56993|CYAY_NEIMA Protein CyaY OS=Neisseria meningitidis serogroup A / serotype 4A
(strain Z2491) GN=cyaY PE=3 SV=1
Length = 107
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Query: 87 ESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVI-NRQTPNKQIWLSSPTSG 145
E+L ++ + ++EN + D + VLT+ G+ GT +I NR TPN+++W+++ + G
Sbjct: 12 EALFEHIEDQIDENGW--DFDCRFAGNVLTIEAGD--GTQIIVNRHTPNQELWIAAKSGG 67
Query: 146 PKRYDFDPSRNIWIYKHDNKSLHDLLQEEI 175
Y F W+ D++ +D+L E +
Sbjct: 68 ---YHFAEQNGKWLATRDSRDFYDVLNEAL 94
>sp|B0KQ38|CYAY_PSEPG Protein CyaY OS=Pseudomonas putida (strain GB-1) GN=cyaY PE=3 SV=1
Length = 110
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Query: 72 SISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQ 131
S+S + + + T ++L D FD E L D+ GVLTV F + +RQ
Sbjct: 2 SLSEARFHDLVDATQQALEDLFD---ESGMDL---DMENSAGVLTVKF-EGGAQLIFSRQ 54
Query: 132 TPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDF 185
P +Q+WL+ SG +D+D W+ + + L ++L+ + +DF
Sbjct: 55 EPLRQLWLAD-RSGGFHFDYDEESKKWVCEKSEELLGEMLERIVWERAGEKLDF 107
>sp|A9M0Q0|CYAY_NEIM0 Protein CyaY OS=Neisseria meningitidis serogroup C (strain 053442)
GN=cyaY PE=3 SV=1
Length = 107
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Query: 87 ESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVI-NRQTPNKQIWLSSPTSG 145
E+L ++ + ++EN + D + VLT+ G+ GT +I NR TPN+++W+++ + G
Sbjct: 12 EALFEHIEDQIDENGW--DFDCRFAGNVLTIEAGD--GTQIIVNRHTPNQELWIAAKSGG 67
Query: 146 PKRYDFDPSRNIWIYKHDNKSLHDLLQEEI 175
Y F W+ D++ +D+L E +
Sbjct: 68 ---YHFAEQNGKWLATRDSRDFYDVLNEAL 94
>sp|B4RRA8|CYAY_NEIG2 Protein CyaY OS=Neisseria gonorrhoeae (strain NCCP11945) GN=cyaY
PE=3 SV=1
Length = 107
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Query: 87 ESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVI-NRQTPNKQIWLSSPTSG 145
E+L ++ + ++EN + D + VLT+ G+ GT +I NR TPN+++W+++ + G
Sbjct: 12 EALFEHIEDQIDENGW--DFDCRFAGNVLTIEAGD--GTQIIVNRHTPNQELWIAAKSGG 67
Query: 146 PKRYDFDPSRNIWIYKHDNKSLHDLLQEEI 175
Y F W+ D++ +D+L E +
Sbjct: 68 ---YHFAEQNGKWLATRDSRDFYDVLNEAL 94
>sp|Q5F536|CYAY_NEIG1 Protein CyaY OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA
1090) GN=cyaY PE=3 SV=1
Length = 107
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Query: 87 ESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVI-NRQTPNKQIWLSSPTSG 145
E+L ++ + ++EN + D + VLT+ G+ GT +I NR TPN+++W+++ + G
Sbjct: 12 EALFEHIEDQIDENGW--DFDCRFAGNVLTIEAGD--GTQIIVNRHTPNQELWIAAKSGG 67
Query: 146 PKRYDFDPSRNIWIYKHDNKSLHDLLQEEI 175
Y F W+ D++ +D+L E +
Sbjct: 68 ---YHFAEQNGKWLATRDSRDFYDVLNEAL 94
>sp|A1KW58|CYAY_NEIMF Protein CyaY OS=Neisseria meningitidis serogroup C / serotype 2a
(strain ATCC 700532 / FAM18) GN=cyaY PE=3 SV=1
Length = 107
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Query: 87 ESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVI-NRQTPNKQIWLSSPTSG 145
E+L ++ + ++EN + D + VLT+ G+ GT +I NR TPN+++W+++ + G
Sbjct: 12 EALFEHIEDQIDENGW--DFDCRFAGNVLTIEAGD--GTQIIVNRHTPNQELWIAAKSGG 67
Query: 146 PKRYDFDPSRNIWIYKHDNKSLHDLLQEEI 175
Y F W+ D++ +D+L E +
Sbjct: 68 ---YHFAEQNGKWLATRDSRDFYDVLNEAL 94
>sp|Q4K3W5|CYAY_PSEF5 Protein CyaY OS=Pseudomonas fluorescens (strain Pf-5 / ATCC
BAA-477) GN=cyaY PE=3 SV=1
Length = 110
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 72 SISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVI-NR 130
S++ + + + T ++L D FD + L + D+ GVLTV F N G+ VI +R
Sbjct: 2 SLTEARFHDLVDATQQTLEDIFD-----ESDL-DIDLESSAGVLTVKFDN--GSQVIFSR 53
Query: 131 QTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDF 185
Q P +Q+WL++ SG +D+D W+ + L ++L+ ++ ++F
Sbjct: 54 QEPLRQLWLAA-RSGGFHFDYDEESERWMCDKSEEQLGEMLERIVLEQADIKLEF 107
>sp|B5YY53|CYAY_ECO5E Protein CyaY OS=Escherichia coli O157:H7 (strain EC4115 / EHEC)
GN=cyaY PE=3 SV=1
Length = 106
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 113 GVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQ 172
GVLT+ F N +INRQ P Q+WL++ G Y FD + WI ++ DLL+
Sbjct: 37 GVLTITFENG-SKIIINRQEPLHQVWLATKQGG---YHFDLKGDEWICDRSGETFRDLLE 92
Query: 173 EEIVTIVTSNVDF 185
+ V F
Sbjct: 93 QAATQQAGETVSF 105
>sp|Q8XAP0|CYAY_ECO57 Protein CyaY OS=Escherichia coli O157:H7 GN=cyaY PE=3 SV=1
Length = 106
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 113 GVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQ 172
GVLT+ F N +INRQ P Q+WL++ G Y FD + WI ++ DLL+
Sbjct: 37 GVLTITFENG-SKIIINRQEPLHQVWLATKQGG---YHFDLKGDEWICDRSGETFRDLLE 92
Query: 173 EEIVTIVTSNVDF 185
+ V F
Sbjct: 93 QAATQQAGETVSF 105
>sp|P56977|CYAY_NEIMB Protein CyaY OS=Neisseria meningitidis serogroup B (strain MC58)
GN=cyaY PE=3 SV=1
Length = 107
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 87 ESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGP 146
E+L ++ + ++EN + D + VLT+ G+ ++NR TPN+++W+++ + G
Sbjct: 12 EALFEHIEDQIDENGW--DFDCRFAGNVLTIEAGDG-AQIIVNRHTPNQELWIAAKSGG- 67
Query: 147 KRYDFDPSRNIWIYKHDNKSLHDLLQEEI 175
Y F W+ D + +D+L E +
Sbjct: 68 --YHFAEQNGKWLATRDGRDFYDVLNEAL 94
>sp|A4VGW8|CYAY_PSEU5 Protein CyaY OS=Pseudomonas stutzeri (strain A1501) GN=cyaY PE=3
SV=1
Length = 110
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 72 SISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQ 131
S+S Y + + ES+ D FD +T L + D+ GVLTV F N +++RQ
Sbjct: 2 SLSEARYHDLVDAVQESVEDVFD-----DTSL-DVDLENSGGVLTVRFDNGS-QLILSRQ 54
Query: 132 TPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLL 171
+Q+W+++ SG +D+D +W+ + L +LL
Sbjct: 55 PALRQLWVAA-RSGGFHFDYDEGSQLWLCDASGERLGELL 93
>sp|Q88CF6|CYAY_PSEPK Protein CyaY OS=Pseudomonas putida (strain KT2440) GN=cyaY PE=3
SV=1
Length = 110
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Query: 72 SISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQ 131
S+S + + + T ++L D FD E L D+ GVLTV F + +RQ
Sbjct: 2 SLSEARFHDLVDATQQALEDLFD---ESGLDL---DMENSAGVLTVKF-EGGAQLIFSRQ 54
Query: 132 TPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDF 185
P +Q+WL+ SG +D+D W+ + + L ++L+ + +DF
Sbjct: 55 EPLRQLWLAD-RSGGFHFDYDEDSGKWVCEKSEELLGEMLERIVWERAGEKLDF 107
>sp|A5WAU2|CYAY_PSEP1 Protein CyaY OS=Pseudomonas putida (strain F1 / ATCC 700007)
GN=cyaY PE=3 SV=1
Length = 110
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Query: 72 SISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQ 131
S+S + + + T ++L D FD E L D+ GVLTV F + +RQ
Sbjct: 2 SLSEARFHDLVDATQQALEDLFD---ESGLDL---DMENSAGVLTVKF-EGGAQLIFSRQ 54
Query: 132 TPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDF 185
P +Q+WL+ SG +D+D W+ + + L ++L+ + +DF
Sbjct: 55 EPLRQLWLAD-RSGGFHFDYDEDSGKWVCEKSEELLGEMLERIVWERAGEKLDF 107
>sp|A8GRM5|CYAY_RICRS Protein CyaY OS=Rickettsia rickettsii (strain Sheila Smith) GN=cyaY
PE=3 SV=1
Length = 103
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 87 ESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGP 146
E+ Y +EE + DV +L N G YVIN+Q+ K+IWLSSP SGP
Sbjct: 11 ETTIAYIAEKIEEQDKEASIDVDLQGDIL--NLDTDKGVYVINKQSAAKEIWLSSPVSGP 68
Query: 147 KRYDFDPSR 155
+ ++ +
Sbjct: 69 YHFFYEQGK 77
>sp|B0BX32|CYAY_RICRO Protein CyaY OS=Rickettsia rickettsii (strain Iowa) GN=cyaY PE=3
SV=1
Length = 103
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 87 ESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGP 146
E+ Y +EE + DV +L N G YVIN+Q+ K+IWLSSP SGP
Sbjct: 11 ETTIAYIAEKIEEQDKEASIDVDLQGDIL--NLDTDKGVYVINKQSAAKEIWLSSPVSGP 68
Query: 147 KRYDFDPSR 155
+ ++ +
Sbjct: 69 YHFFYEQGK 77
>sp|C4K1X9|CYAY_RICPU Protein CyaY OS=Rickettsia peacockii (strain Rustic) GN=cyaY PE=3
SV=1
Length = 103
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 87 ESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGP 146
E+ Y +EE + DV +L N G YVIN+Q+ K+IWLSSP SGP
Sbjct: 11 ETTIAYIAEKIEEQDKEASIDVDLQGDIL--NLDTDKGVYVINKQSAAKEIWLSSPVSGP 68
>sp|B1LLX7|CYAY_ECOSM Protein CyaY OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=cyaY
PE=3 SV=1
Length = 106
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 113 GVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQ 172
GVLT+ F N +INRQ P Q+WL++ G Y FD + WI ++ DLL+
Sbjct: 37 GVLTITFENG-SKIIINRQEPLHQVWLATKQGG---YHFDMKGDEWICDRSGETFWDLLE 92
Query: 173 EEIVTIVTSNVDF 185
+ V F
Sbjct: 93 QAATQQAGETVSF 105
>sp|Q3YVG0|CYAY_SHISS Protein CyaY OS=Shigella sonnei (strain Ss046) GN=cyaY PE=3 SV=1
Length = 106
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 113 GVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQ 172
GVLT+ F N +INRQ P Q+WL++ G Y FD + WI ++ DLL+
Sbjct: 37 GVLTITFENG-SKIIINRQEPLHQVWLATKQGG---YHFDLKGDEWICDRSGETFWDLLE 92
Query: 173 EEIVTIVTSNVDF 185
+ V F
Sbjct: 93 QAATQQAGETVSF 105
>sp|Q83IX2|CYAY_SHIFL Protein CyaY OS=Shigella flexneri GN=cyaY PE=3 SV=1
Length = 106
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 113 GVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQ 172
GVLT+ F N +INRQ P Q+WL++ G Y FD + WI ++ DLL+
Sbjct: 37 GVLTITFENG-SKIIINRQEPLHQVWLATKQGG---YHFDLKGDEWICDRSGETFWDLLE 92
Query: 173 EEIVTIVTSNVDF 185
+ V F
Sbjct: 93 QAATQQAGETVSF 105
>sp|Q329Y2|CYAY_SHIDS Protein CyaY OS=Shigella dysenteriae serotype 1 (strain Sd197)
GN=cyaY PE=3 SV=1
Length = 106
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 113 GVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQ 172
GVLT+ F N +INRQ P Q+WL++ G Y FD + WI ++ DLL+
Sbjct: 37 GVLTITFENG-SKIIINRQEPLHQVWLATKQGG---YHFDLKGDEWICDRSGETFWDLLE 92
Query: 173 EEIVTIVTSNVDF 185
+ V F
Sbjct: 93 QAATQQAGETVSF 105
>sp|Q31UI1|CYAY_SHIBS Protein CyaY OS=Shigella boydii serotype 4 (strain Sb227) GN=cyaY
PE=3 SV=1
Length = 106
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 113 GVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQ 172
GVLT+ F N +INRQ P Q+WL++ G Y FD + WI ++ DLL+
Sbjct: 37 GVLTITFENG-SKIIINRQEPLHQVWLATKQGG---YHFDLKGDEWICDRSGETFWDLLE 92
Query: 173 EEIVTIVTSNVDF 185
+ V F
Sbjct: 93 QAATQQAGETVSF 105
>sp|B2TUW2|CYAY_SHIB3 Protein CyaY OS=Shigella boydii serotype 18 (strain CDC 3083-94 /
BS512) GN=cyaY PE=3 SV=1
Length = 106
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 113 GVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQ 172
GVLT+ F N +INRQ P Q+WL++ G Y FD + WI ++ DLL+
Sbjct: 37 GVLTITFENG-SKIIINRQEPLHQVWLATKQGG---YHFDLKGDEWICDRSGETFWDLLE 92
Query: 173 EEIVTIVTSNVDF 185
+ V F
Sbjct: 93 QAATQQAGETVSF 105
>sp|B7LU51|CYAY_ESCF3 Protein CyaY OS=Escherichia fergusonii (strain ATCC 35469 / DSM
13698 / CDC 0568-73) GN=cyaY PE=3 SV=1
Length = 106
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 113 GVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQ 172
GVLT+ F N +INRQ P Q+WL++ G Y FD + WI ++ DLL+
Sbjct: 37 GVLTITFENG-SKIIINRQEPLHQVWLATKQGG---YHFDLKGDEWICDRSGETFWDLLE 92
Query: 173 EEIVTIVTSNVDF 185
+ V F
Sbjct: 93 QAATQQAGETVSF 105
>sp|Q1R4D1|CYAY_ECOUT Protein CyaY OS=Escherichia coli (strain UTI89 / UPEC) GN=cyaY PE=3
SV=1
Length = 106
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 113 GVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQ 172
GVLT+ F N +INRQ P Q+WL++ G Y FD + WI ++ DLL+
Sbjct: 37 GVLTITFENG-SKIIINRQEPLHQVWLATKQGG---YHFDLKGDEWICDRSGETFWDLLE 92
Query: 173 EEIVTIVTSNVDF 185
+ V F
Sbjct: 93 QAATQQAGETVSF 105
>sp|B6I4E2|CYAY_ECOSE Protein CyaY OS=Escherichia coli (strain SE11) GN=cyaY PE=3 SV=1
Length = 106
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 113 GVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQ 172
GVLT+ F N +INRQ P Q+WL++ G Y FD + WI ++ DLL+
Sbjct: 37 GVLTITFENG-SKIIINRQEPLHQVWLATKQGG---YHFDLKGDEWICDRSGETFWDLLE 92
Query: 173 EEIVTIVTSNVDF 185
+ V F
Sbjct: 93 QAATQQAGETVSF 105
>sp|B7NFA9|CYAY_ECOLU Protein CyaY OS=Escherichia coli O17:K52:H18 (strain UMN026 /
ExPEC) GN=cyaY PE=3 SV=1
Length = 106
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 113 GVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQ 172
GVLT+ F N +INRQ P Q+WL++ G Y FD + WI ++ DLL+
Sbjct: 37 GVLTITFENG-SKIIINRQEPLHQVWLATKQGG---YHFDLKGDEWICDRSGETFWDLLE 92
Query: 173 EEIVTIVTSNVDF 185
+ V F
Sbjct: 93 QAATQQAGETVSF 105
>sp|P27838|CYAY_ECOLI Protein CyaY OS=Escherichia coli (strain K12) GN=cyaY PE=1 SV=1
Length = 106
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 113 GVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQ 172
GVLT+ F N +INRQ P Q+WL++ G Y FD + WI ++ DLL+
Sbjct: 37 GVLTITFENG-SKIIINRQEPLHQVWLATKQGG---YHFDLKGDEWICDRSGETFWDLLE 92
Query: 173 EEIVTIVTSNVDF 185
+ V F
Sbjct: 93 QAATQQAGETVSF 105
>sp|B1IW97|CYAY_ECOLC Protein CyaY OS=Escherichia coli (strain ATCC 8739 / DSM 1576 /
Crooks) GN=cyaY PE=3 SV=1
Length = 106
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 113 GVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQ 172
GVLT+ F N +INRQ P Q+WL++ G Y FD + WI ++ DLL+
Sbjct: 37 GVLTITFENG-SKIIINRQEPLHQVWLATKQGG---YHFDLKGDEWICDRSGETFWDLLE 92
Query: 173 EEIVTIVTSNVDF 185
+ V F
Sbjct: 93 QAATQQAGETVSF 105
>sp|Q0TAR9|CYAY_ECOL5 Protein CyaY OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC)
GN=cyaY PE=3 SV=1
Length = 106
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 113 GVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQ 172
GVLT+ F N +INRQ P Q+WL++ G Y FD + WI ++ DLL+
Sbjct: 37 GVLTITFENG-SKIIINRQEPLHQVWLATKQGG---YHFDLKGDEWICDRSGETFWDLLE 92
Query: 173 EEIVTIVTSNVDF 185
+ V F
Sbjct: 93 QAATQQAGETVSF 105
>sp|A1AHX3|CYAY_ECOK1 Protein CyaY OS=Escherichia coli O1:K1 / APEC GN=cyaY PE=3 SV=1
Length = 106
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 113 GVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQ 172
GVLT+ F N +INRQ P Q+WL++ G Y FD + WI ++ DLL+
Sbjct: 37 GVLTITFENG-SKIIINRQEPLHQVWLATKQGG---YHFDLKGDEWICDRSGETFWDLLE 92
Query: 173 EEIVTIVTSNVDF 185
+ V F
Sbjct: 93 QAATQQAGETVSF 105
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,055,419
Number of Sequences: 539616
Number of extensions: 3347207
Number of successful extensions: 7830
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 7730
Number of HSP's gapped (non-prelim): 150
length of query: 196
length of database: 191,569,459
effective HSP length: 111
effective length of query: 85
effective length of database: 131,672,083
effective search space: 11192127055
effective search space used: 11192127055
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)