Query psy10962
Match_columns 196
No_of_seqs 124 out of 465
Neff 4.5
Searched_HMMs 29240
Date Fri Aug 16 22:55:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10962.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10962hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t3l_A Frataxin, mitochondrial 100.0 9.4E-47 3.2E-51 299.7 13.1 123 70-195 6-128 (129)
2 1ew4_A CYAY protein; friedreic 100.0 3.6E-42 1.2E-46 265.0 10.3 105 73-185 1-105 (106)
3 3oeq_A Frataxin homolog, mitoc 100.0 5.7E-41 2E-45 264.9 6.9 112 66-181 10-121 (123)
4 1xkp_B Chaperone protein SYCN; 59.6 10 0.00035 29.6 4.1 51 89-143 4-54 (124)
5 1xhj_A Nitrogen fixation prote 58.8 11 0.00037 27.4 4.0 44 72-121 2-46 (88)
6 2nvn_A Hypothetical protein; s 43.4 28 0.00095 27.0 4.3 52 69-121 32-83 (122)
7 2it9_A Hypothetical protein; s 41.0 29 0.00099 27.1 4.0 52 69-121 30-81 (127)
8 3gla_A Low molecular weight he 30.1 30 0.001 24.2 2.4 17 104-120 79-95 (100)
9 1mby_A SAK, serine/threonine k 29.6 19 0.00064 26.6 1.2 62 105-181 15-76 (88)
10 1ktg_A Diadenosine tetraphosph 27.5 88 0.003 21.8 4.6 23 163-185 41-66 (138)
11 4fei_A Heat shock protein-rela 26.7 37 0.0013 24.1 2.4 17 104-120 76-92 (102)
12 2yyh_A MUTT domain, 8-OXO-DGTP 26.6 91 0.0031 21.9 4.5 23 163-185 48-70 (139)
13 3q9p_A Heat shock protein beta 26.0 35 0.0012 23.5 2.1 17 104-120 65-82 (85)
14 2y1y_A Alpha-crystallin B chai 23.6 45 0.0016 23.1 2.3 17 104-120 64-81 (90)
15 3l1e_A Alpha-crystallin A chai 22.6 53 0.0018 23.6 2.6 17 104-120 70-87 (106)
16 2wj5_A Heat shock protein beta 22.0 61 0.0021 23.0 2.8 17 104-120 69-86 (101)
17 3aab_A Putative uncharacterize 21.5 52 0.0018 24.0 2.4 17 104-120 96-113 (123)
18 3id9_A MUTT/nudix family prote 20.7 2.3E+02 0.0077 20.6 5.9 47 123-185 33-79 (171)
19 3e11_A Predicted zincin-like m 20.4 30 0.001 26.0 0.8 28 70-97 2-29 (114)
No 1
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=100.00 E-value=9.4e-47 Score=299.75 Aligned_cols=123 Identities=48% Similarity=0.884 Sum_probs=112.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcceeecCcEEEEEEcCCCcEEEEcCCCccceeeeccCCCCCcce
Q psy10962 70 TGSISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRY 149 (196)
Q Consensus 70 ~s~Mte~eF~~lAD~tL~~Iee~LE~~~d~~~~~~d~Dvd~sgGVLTI~f~~~~gtyVINkQ~P~rQIWLSSPiSGp~hF 149 (196)
.+.|++.|||++||++|+.|+++||++.|+...+.|+||++++|||||+|++++|+||||||+|+||||||||+|||+||
T Consensus 6 ~~~m~e~ef~~lad~~L~~ie~~le~~~d~~~~~~d~D~e~~~gVLti~f~~~~g~~VINkQ~P~~QIWLASp~SGp~hf 85 (129)
T 3t3l_A 6 PGSLDETTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGGDLGTYVINKQTPNKAIWLSSPSSGPKRY 85 (129)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHTSTTSCTTCEEEEETTEEEEECCTTCCEEEEEEETTTTEEEEECSSSCCEEE
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHhhhcccccccceeeecCCCEEEEEEcCCCCEEEEeCCchhhHhheeCCCCCCeee
Confidence 57899999999999999999999999887633457999999999999999734999999999999999999999999999
Q ss_pred eEcCCCCceEEcCCCccHHHHHHHHHHhhcCCcEEEeeccccCCCC
Q psy10962 150 DFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDFYSNCSHSGKH 195 (196)
Q Consensus 150 dy~~~~~~Wi~tRdg~eL~~lLs~Els~~~G~~v~f~~~~~~~~~~ 195 (196)
+|+++ +|+++|+|.+|+++|++||++++|++|+| .+|||+|+-
T Consensus 86 d~~~~--~Wi~~rdg~~L~~~L~~el~~~~g~~v~~-~~l~~~~~~ 128 (129)
T 3t3l_A 86 DWTGK--NWVYSHDGVSLHELLAAELTKALKTKLDL-SSLAYSGKD 128 (129)
T ss_dssp EECSS--SEEETTTCCBHHHHHHHHHHHHHTSCCCC-TTSTTCSSC
T ss_pred EecCC--EEEECCCCchHHHHHHHHHHHHhCCceee-eecccCCCC
Confidence 99987 89999999999999999999999999999 999999973
No 2
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=100.00 E-value=3.6e-42 Score=265.01 Aligned_cols=105 Identities=25% Similarity=0.489 Sum_probs=98.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcceeecCcEEEEEEcCCCcEEEEcCCCccceeeeccCCCCCcceeEc
Q psy10962 73 ISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFD 152 (196)
Q Consensus 73 Mte~eF~~lAD~tL~~Iee~LE~~~d~~~~~~d~Dvd~sgGVLTI~f~~~~gtyVINkQ~P~rQIWLSSPiSGp~hFdy~ 152 (196)
||+.+||++||++|+.|+++||++. .+.|+|++++||||||+|++ +|+||||||+|+||||||||+|| +||+|+
T Consensus 1 m~~~ef~~lad~~l~~ie~~le~~~----~~~d~D~e~~~gVLti~f~~-~~~~VINkQ~P~~QIWlaSp~sG-~hfd~~ 74 (106)
T 1ew4_A 1 MNDSEFHRLADQLWLTIEERLDDWD----GDSDIDCEINGGVLTITFEN-GSKIIINRQEPLHQVWLATKQGG-YHFDLK 74 (106)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTCC----SSSCCEEEEETTEEEEECTT-SCEEEEEEETTTTEEEEECSSCE-EEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhc----cCCCEeeeccCCEEEEEECC-CCEEEEeCCchhhhheEecCCCc-eeeeec
Confidence 8999999999999999999999752 34789999999999999995 99999999999999999999877 999999
Q ss_pred CCCCceEEcCCCccHHHHHHHHHHhhcCCcEEE
Q psy10962 153 PSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDF 185 (196)
Q Consensus 153 ~~~~~Wi~tRdg~eL~~lLs~Els~~~G~~v~f 185 (196)
++ +|+++|+|.+|+++|++||++++|.+|+|
T Consensus 75 ~~--~Wi~~r~g~~L~~~L~~e~~~~~g~~v~f 105 (106)
T 1ew4_A 75 GD--EWICDRSGETFWDLLEQAATQQAGETVSF 105 (106)
T ss_dssp TT--EEEETTTCCBHHHHHHHHHHHHHTSCCCC
T ss_pred CC--EEEECCCCchHHHHHHHHHHHHhCCCccc
Confidence 86 99999999999999999999999999987
No 3
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=100.00 E-value=5.7e-41 Score=264.92 Aligned_cols=112 Identities=33% Similarity=0.560 Sum_probs=103.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcceeecCcEEEEEEcCCCcEEEEcCCCccceeeeccCCCC
Q psy10962 66 CSSLTGSISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSG 145 (196)
Q Consensus 66 ~~~~~s~Mte~eF~~lAD~tL~~Iee~LE~~~d~~~~~~d~Dvd~sgGVLTI~f~~~~gtyVINkQ~P~rQIWLSSPiSG 145 (196)
.|.....|++.|||++||++|+.|+++||++.|+ ..++++||+++||||||+|++ +|+||||||+|+||||||||+||
T Consensus 10 ~p~~~~~l~~~efh~lad~~L~~L~~~lE~~~d~-~~~d~~Dve~~~gVLti~f~~-~~~~VINkQ~P~~QIWlaSp~SG 87 (123)
T 3oeq_A 10 VPQEVLNLPLEKAHEEADDYLDHLLDSLEELSEA-HPDCIPDVELSHGVMTLEIPA-FGTYVINKQPPNKQIWLASPLSG 87 (123)
T ss_dssp CCSTTTTSCCCCCCCHHHHHHHHHHHHHTTTSSS-CSSCCCEEEECSSEEEEECTT-TCCEEEECCCSSSCCEEEETTTE
T ss_pred CCCccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-ccCcceEEEccCCEEEEEECC-CCEEEEeCCChhhHHheecCCCC
Confidence 3677899999999999999999999999998775 223348999999999999995 99999999999999999999999
Q ss_pred CcceeEcCCCCceEEcCCCccHHHHHHHHHHhhcCC
Q psy10962 146 PKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTS 181 (196)
Q Consensus 146 p~hFdy~~~~~~Wi~tRdg~eL~~lLs~Els~~~G~ 181 (196)
|+||+|+++ +|+++|+|.+|+++|++||+++++.
T Consensus 88 p~hfd~~~~--~Wi~~r~g~~l~~~L~~el~~~~~~ 121 (123)
T 3oeq_A 88 PNRFDLLNG--EWVSLRNGTKLTDILTEEVEKAISK 121 (123)
T ss_dssp EEEEEESSS--SEEETTTCCBHHHHHHHHHHHHHHC
T ss_pred CeeEeecCC--eEEECCCCchHHHHHHHHHHHHhcc
Confidence 999999986 9999999999999999999999865
No 4
>1xkp_B Chaperone protein SYCN; YOPN, type III secretion, SYCN, membrane PR chaperon complex; HET: MLY; 1.70A {Yersinia pestis} SCOP: d.198.1.1
Probab=59.61 E-value=10 Score=29.62 Aligned_cols=51 Identities=8% Similarity=0.268 Sum_probs=38.7
Q ss_pred HHHHHHHhhhhcccCCCcceeecCcEEEEEEcCCCcEEEEcCCCccceeeeccCC
Q psy10962 89 LTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQIWLSSPT 143 (196)
Q Consensus 89 Iee~LE~~~d~~~~~~d~Dvd~sgGVLTI~f~~~~gtyVINkQ~P~rQIWLSSPi 143 (196)
|+..|+++.-. -..+++| ..+|++.++|+. .|+.-|-++.--==+|||-|+
T Consensus 4 I~~~i~~F~r~-mG~~~~~--~~~gliqLd~E~-sGtL~iE~~~~~L~l~LAr~l 54 (124)
T 1xkp_B 4 IEPIISHFCQD-LGVPTSS--PLSPLIQLEMAQ-SGTLQLEQHGATLTLWLARSL 54 (124)
T ss_dssp THHHHHHHHHH-TTCCCCS--SCCSEEEEEETT-TEEEEEEEETTEEEEEEEEEC
T ss_pred hHHHHHHHHHH-cCCCCCC--CCCceEEEEecc-CceEEEeecCCEEEEEEeccC
Confidence 55556665543 1334555 479999999996 899999988888889999987
No 5
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=58.83 E-value=11 Score=27.42 Aligned_cols=44 Identities=14% Similarity=0.206 Sum_probs=30.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcce-eecCcEEEEEEcC
Q psy10962 72 SISLPEYEVICNETLESLTDYFDVIVEENTHLENADV-TYGDGVLTVNFGN 121 (196)
Q Consensus 72 ~Mte~eF~~lAD~tL~~Iee~LE~~~d~~~~~~d~Dv-d~sgGVLTI~f~~ 121 (196)
.||+.+-.+.++++|+.|.-+|.. +..|+++ ++.+|++.|.|.+
T Consensus 2 ~~t~~~~~~~I~~~L~~IRP~L~~------dGGdvelv~v~~g~V~V~L~G 46 (88)
T 1xhj_A 2 PTENPTMFDQVAEVIERLRPFLLR------DGGDCTLVDVEDGIVKLQLHG 46 (88)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHH------HSCEEEEEECCSSEEEEEEES
T ss_pred CCChHHHHHHHHHHHHHhcHHHHh------cCCeEEEEEEECCEEEEEEee
Confidence 467777778888888888877774 1234443 2358999999864
No 6
>2nvn_A Hypothetical protein; structural genomics, PSI- protein structure initiative, joint center for structural G JCSG; 2.50A {Synechococcus elongatus} SCOP: d.18.1.3
Probab=43.44 E-value=28 Score=27.03 Aligned_cols=52 Identities=13% Similarity=0.187 Sum_probs=37.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcceeecCcEEEEEEcC
Q psy10962 69 LTGSISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGN 121 (196)
Q Consensus 69 ~~s~Mte~eF~~lAD~tL~~Iee~LE~~~d~~~~~~d~Dvd~sgGVLTI~f~~ 121 (196)
-+..||+.||..++ .++.+|.+.+..+.|+--+...+.++...+.+-+++++
T Consensus 32 WAiELTe~E~~~f~-~Ll~qL~~~~~~i~~eLM~EE~I~lE~E~~~~W~eleG 83 (122)
T 2nvn_A 32 WAVELTAAEMADFC-RLVQQLAETIAAIAPELMPEERLQIEAESALLWLEAEG 83 (122)
T ss_dssp CEEEECHHHHHHHH-HHHHHHHHHHHTSCCCSSCSSCEEEEEECSSEEEEEEE
T ss_pred hheeeCHHHHHHHH-HHHHHHHHHHHHHHHHhcchhheeeeecCccEEEEeec
Confidence 35689999999998 67888888888766543234566667777777777753
No 7
>2it9_A Hypothetical protein; structural genomics, PSI- protein structure initiative, joint center for structural G JCSG; HET: MSE PGE; 1.80A {Prochlorococcus marinus} SCOP: d.18.1.3
Probab=40.95 E-value=29 Score=27.11 Aligned_cols=52 Identities=12% Similarity=0.182 Sum_probs=35.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcceeecCcEEEEEEcC
Q psy10962 69 LTGSISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGN 121 (196)
Q Consensus 69 ~~s~Mte~eF~~lAD~tL~~Iee~LE~~~d~~~~~~d~Dvd~sgGVLTI~f~~ 121 (196)
-+..||+.||..++ .++.+|.+.+..+.|+--+...+.++...+.+-+++++
T Consensus 30 WAiELTe~E~~~f~-~Ll~qL~~~~~~i~~eLM~EE~I~lE~E~~~~W~eleG 81 (127)
T 2it9_A 30 WAIELDKSEWKILV-EVVMELCDQYKLVKEQLMGDEDITLELERRPWLAILNG 81 (127)
T ss_dssp EEEEECHHHHHHHH-HHHHHHHHHHHHHTTTCCTTCEEEEEEEETTEEEEEEE
T ss_pred eeeeecHHHHHHHH-HHHHHHHHHHHHHHHHhcchhheeeeecCccEEEEeec
Confidence 34689999999988 67778888887766552233455666666666666653
No 8
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=30.10 E-value=30 Score=24.17 Aligned_cols=17 Identities=18% Similarity=0.333 Sum_probs=14.2
Q ss_pred CCcceeecCcEEEEEEc
Q psy10962 104 ENADVTYGDGVLTVNFG 120 (196)
Q Consensus 104 ~d~Dvd~sgGVLTI~f~ 120 (196)
..+...+.+|||+|+++
T Consensus 79 ~~i~A~~~~GvL~I~~p 95 (100)
T 3gla_A 79 DGITAAGRNGVLEIRIP 95 (100)
T ss_dssp TSCEEEEETTEEEEEEE
T ss_pred HHeEEEEeCCEEEEEEe
Confidence 45677889999999996
No 9
>1mby_A SAK, serine/threonine kinase; POLO domain, strand exchange, transferase; 2.00A {Mus musculus} SCOP: d.223.1.1
Probab=29.65 E-value=19 Score=26.59 Aligned_cols=62 Identities=15% Similarity=0.315 Sum_probs=39.9
Q ss_pred CcceeecCcEEEEEEcCCCcEEEEcCCCccceeeeccCCCCCcceeEcCCCCceEEcCCCccHHHHHHHHHHhhcCC
Q psy10962 105 NADVTYGDGVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTS 181 (196)
Q Consensus 105 d~Dvd~sgGVLTI~f~~~~gtyVINkQ~P~rQIWLSSPiSGp~hFdy~~~~~~Wi~tRdg~eL~~lLs~Els~~~G~ 181 (196)
..-.+++.|++.|.|.| |++.+++.+. --|=.++| .| ...+|.+. ..|-+.+.+-|..+-..
T Consensus 15 G~AsQLs~G~V~VQf~D-GS~L~~~p~~--~~ItYt~~-~G-~~t~y~~~----------d~LP~~vrekL~~lp~I 76 (88)
T 1mby_A 15 GWATQLTSGAVWVQFND-GSQLVMQAGV--SSISYTSP-DG-QTTRYGEN----------EKLPEYIKQKLQLLSSI 76 (88)
T ss_dssp EEEECSSEEEEEEEETT-SCEEEEEEEE--EEEEEECT-TS-CEEEEETT----------SCCCHHHHHHHTTTCCE
T ss_pred eEEEeecCccEEEEEcC-CCEEEEecCc--ceeEEeCC-CC-ceEEcCcC----------CCccHHHHHHHhhhHHH
Confidence 45567899999999984 9999998655 46666665 33 33333322 23556666666655443
No 10
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=27.55 E-value=88 Score=21.78 Aligned_cols=23 Identities=4% Similarity=-0.061 Sum_probs=20.0
Q ss_pred CCccHHHHHHHHHHhhcCC---cEEE
Q psy10962 163 DNKSLHDLLQEEIVTIVTS---NVDF 185 (196)
Q Consensus 163 dg~eL~~lLs~Els~~~G~---~v~f 185 (196)
.|+++.+.+.+|+.+-+|. ++.+
T Consensus 41 ~gE~~~~aa~RE~~EEtGl~~~~~~~ 66 (138)
T 1ktg_A 41 PGEDEWQAAIRETKEEANITKEQLTI 66 (138)
T ss_dssp TTCCHHHHHHHHHHHHHCCCGGGEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCccceEE
Confidence 5889999999999999998 5555
No 11
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=26.71 E-value=37 Score=24.09 Aligned_cols=17 Identities=35% Similarity=0.532 Sum_probs=14.0
Q ss_pred CCcceeecCcEEEEEEc
Q psy10962 104 ENADVTYGDGVLTVNFG 120 (196)
Q Consensus 104 ~d~Dvd~sgGVLTI~f~ 120 (196)
+.+...+.+|||+|+++
T Consensus 76 ~~i~A~~~~GvL~I~lp 92 (102)
T 4fei_A 76 ASGVASLAGGVLTVRFE 92 (102)
T ss_dssp TCCEEEEETTEEEEEEE
T ss_pred hHcEEEEECCEEEEEEE
Confidence 45667889999999997
No 12
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=26.64 E-value=91 Score=21.93 Aligned_cols=23 Identities=9% Similarity=0.079 Sum_probs=20.5
Q ss_pred CCccHHHHHHHHHHhhcCCcEEE
Q psy10962 163 DNKSLHDLLQEEIVTIVTSNVDF 185 (196)
Q Consensus 163 dg~eL~~lLs~Els~~~G~~v~f 185 (196)
.|+++.+.+.+|+.+-+|..+..
T Consensus 48 ~gE~~~~aa~RE~~EEtGl~~~~ 70 (139)
T 2yyh_A 48 VGERVEEAAAREMREETGLEVRL 70 (139)
T ss_dssp TTCCHHHHHHHHHHHHHCCCCEE
T ss_pred CCCCHHHHHHHHHHHHHCCCccc
Confidence 68899999999999999988764
No 13
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=26.02 E-value=35 Score=23.55 Aligned_cols=17 Identities=24% Similarity=0.360 Sum_probs=13.9
Q ss_pred CCcceeec-CcEEEEEEc
Q psy10962 104 ENADVTYG-DGVLTVNFG 120 (196)
Q Consensus 104 ~d~Dvd~s-gGVLTI~f~ 120 (196)
+.+...+. +|||+|+++
T Consensus 65 ~~i~A~~~~~GvL~I~lP 82 (85)
T 3q9p_A 65 TQVSSSLSPEGTLTVEAP 82 (85)
T ss_dssp GGCEEEECTTSEEEEEEE
T ss_pred HHcEEEECCCCEEEEEEE
Confidence 35667787 999999997
No 14
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=23.63 E-value=45 Score=23.10 Aligned_cols=17 Identities=41% Similarity=0.378 Sum_probs=13.8
Q ss_pred CCcceee-cCcEEEEEEc
Q psy10962 104 ENADVTY-GDGVLTVNFG 120 (196)
Q Consensus 104 ~d~Dvd~-sgGVLTI~f~ 120 (196)
+.+...+ .+|||+|+++
T Consensus 64 ~~i~A~~~~~GvL~I~~p 81 (90)
T 2y1y_A 64 LTITSSMSSDGVLTVNGP 81 (90)
T ss_dssp GGCEEEECTTSEEEEEEC
T ss_pred hHcEEEECCCCEEEEEEE
Confidence 3466788 7999999997
No 15
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=22.59 E-value=53 Score=23.60 Aligned_cols=17 Identities=24% Similarity=0.292 Sum_probs=14.5
Q ss_pred CCcceee-cCcEEEEEEc
Q psy10962 104 ENADVTY-GDGVLTVNFG 120 (196)
Q Consensus 104 ~d~Dvd~-sgGVLTI~f~ 120 (196)
+.+...+ .+|||+|+++
T Consensus 70 ~~i~A~~s~~GvL~I~~P 87 (106)
T 3l1e_A 70 SALSCSLSADGMLTFSGP 87 (106)
T ss_dssp TSCEEEECTTSEEEEEEE
T ss_pred hHcEEEECCCCEEEEEEE
Confidence 5677888 7999999997
No 16
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=22.04 E-value=61 Score=23.02 Aligned_cols=17 Identities=18% Similarity=0.323 Sum_probs=14.1
Q ss_pred CCcceee-cCcEEEEEEc
Q psy10962 104 ENADVTY-GDGVLTVNFG 120 (196)
Q Consensus 104 ~d~Dvd~-sgGVLTI~f~ 120 (196)
+.+...+ .+|||+|+++
T Consensus 69 ~~i~A~~s~nGvL~I~lP 86 (101)
T 2wj5_A 69 AAVTSALSPEGVLSIQAT 86 (101)
T ss_dssp TCCEEEECTTSEEEEEEC
T ss_pred hHCEEEECCCCEEEEEEE
Confidence 4567788 7999999997
No 17
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=21.47 E-value=52 Score=24.02 Aligned_cols=17 Identities=29% Similarity=0.554 Sum_probs=14.1
Q ss_pred CCc-ceeecCcEEEEEEc
Q psy10962 104 ENA-DVTYGDGVLTVNFG 120 (196)
Q Consensus 104 ~d~-Dvd~sgGVLTI~f~ 120 (196)
..+ ...+.+|||+|+++
T Consensus 96 ~~i~~A~~~~GvL~I~lP 113 (123)
T 3aab_A 96 DAEISGKYENGVLTIRIP 113 (123)
T ss_dssp TCCCEEEEETTEEEEEEE
T ss_pred chhCeeEEcCCEEEEEEE
Confidence 455 77889999999997
No 18
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=20.71 E-value=2.3e+02 Score=20.60 Aligned_cols=47 Identities=11% Similarity=0.257 Sum_probs=32.6
Q ss_pred CcEEEEcCCCccceeeeccCCCCCcceeEcCCCCceEEcCCCccHHHHHHHHHHhhcCCcEEE
Q psy10962 123 HGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDF 185 (196)
Q Consensus 123 ~gtyVINkQ~P~rQIWLSSPiSGp~hFdy~~~~~~Wi~tRdg~eL~~lLs~Els~~~G~~v~f 185 (196)
.|++++-|+....-.| .+-++ .+ ..|+++.+.+.+|+.+-+|..+..
T Consensus 33 ~~~vLL~~r~~~~~~w-----------~~PgG---~v--e~gEs~~~aa~REl~EEtGl~~~~ 79 (171)
T 3id9_A 33 DEKVLLVKQKVANRDW-----------SLPGG---RV--ENGETLEEAMIREMREETGLEVKI 79 (171)
T ss_dssp TTEEEEEECSSTTCCE-----------ECCEE---EC--CTTCCHHHHHHHHHHHHHCCCEEE
T ss_pred CCEEEEEEEECCCCeE-----------ECCCc---cC--CCCCCHHHHHHHHHHHHHCCcccc
Confidence 3677777776543334 22222 33 358899999999999999998764
No 19
>3e11_A Predicted zincin-like metalloprotease; DUF1025 family protein, zincin-like fold, conserved matrix metalloprotease motif; 1.80A {Acidothermus cellulolyticus 11B} SCOP: d.92.1.17
Probab=20.45 E-value=30 Score=25.98 Aligned_cols=28 Identities=11% Similarity=0.279 Sum_probs=22.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q psy10962 70 TGSISLPEYEVICNETLESLTDYFDVIV 97 (196)
Q Consensus 70 ~s~Mte~eF~~lAD~tL~~Iee~LE~~~ 97 (196)
+..|+..+|..++.+.++.|.+.+-+.+
T Consensus 2 m~~~~~e~Fd~lv~~a~~~Lp~~~~~~l 29 (114)
T 3e11_A 2 MVYVDPDRFDELVAEALDGIPEEFARAM 29 (114)
T ss_dssp CCCCCHHHHHHHHHHHHHTSCGGGTGGG
T ss_pred CcccCHHHHHHHHHHHHHHhhHHHHHHc
Confidence 4579999999999999999976665433
Done!