Your job contains 1 sequence.
>psy10962
MISCRISSYVSNNVGKCLRQVKCVQSYSRCVCNSNGIIGHGSHRKTLVQSQDNVLNFTGI
HCRNLCSSLTGSISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFG
NPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVT
SNVDFYSNCSHSGKHR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10962
(196 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0030092 - symbol:fh "frataxin homolog" species:722... 363 2.5e-33 1
UNIPROTKB|I3LTK1 - symbol:FXN "Uncharacterized protein" s... 318 1.8e-31 2
MGI|MGI:1096879 - symbol:Fxn "frataxin" species:10090 "Mu... 337 1.4e-30 1
ZFIN|ZDB-GENE-070209-286 - symbol:fxn "frataxin" species:... 331 6.2e-30 1
UNIPROTKB|C9JAX1 - symbol:FXN "Frataxin, mitochondrial" s... 315 3.1e-28 1
UNIPROTKB|Q16595 - symbol:FXN "Frataxin, mitochondrial" s... 315 3.1e-28 1
UNIPROTKB|Q05B87 - symbol:FXN "Frataxin, mitochondrial" s... 311 8.2e-28 1
UNIPROTKB|F1P1P5 - symbol:FXN "Uncharacterized protein" s... 309 1.3e-27 1
UNIPROTKB|A6Q0K4 - symbol:fxn "Frataxin" species:9615 "Ca... 309 1.3e-27 1
RGD|1565754 - symbol:Fxn "frataxin" species:10116 "Rattus... 290 1.4e-25 1
WB|WBGene00001486 - symbol:frh-1 species:6239 "Caenorhabd... 273 8.7e-24 1
UNIPROTKB|E1C7H4 - symbol:FXN "Uncharacterized protein" s... 243 1.3e-20 1
UNIPROTKB|H7C585 - symbol:FXN "Frataxin, mitochondrial" s... 240 2.7e-20 1
TAIR|locus:2125477 - symbol:FH "frataxin homolog" species... 240 2.7e-20 1
CGD|CAL0004482 - symbol:YFH1 species:5476 "Candida albica... 231 2.5e-19 1
UNIPROTKB|Q59PA3 - symbol:YFH1 "Putative uncharacterized ... 231 2.5e-19 1
DICTYBASE|DDB_G0293246 - symbol:fxn "frataxin" species:44... 226 8.3e-19 1
POMBASE|SPCC1183.03c - symbol:fxn1 "frataxin" species:489... 211 3.2e-17 1
UNIPROTKB|G4MRI3 - symbol:MGG_02435 "Mitochondrial iron u... 208 6.7e-17 1
UNIPROTKB|A8MXJ6 - symbol:FXN "Frataxin, mitochondrial" s... 202 2.9e-16 1
SGD|S000002278 - symbol:YFH1 "Mitochondrial matrix iron c... 165 2.4e-12 1
ASPGD|ASPL0000051667 - symbol:AN1986 species:162425 "Emer... 144 4.1e-10 1
UNIPROTKB|Q2GHF0 - symbol:ECH_0312 "CyaY protein" species... 128 2.0e-08 1
TIGR_CMR|ECH_0312 - symbol:ECH_0312 "cyaY protein" specie... 128 2.0e-08 1
UNIPROTKB|P27838 - symbol:cyaY species:83333 "Escherichia... 105 8.8e-06 1
UNIPROTKB|Q2GLH1 - symbol:APH_0156 "Frataxin-like domain ... 97 7.5e-05 1
TIGR_CMR|APH_0156 - symbol:APH_0156 "frataxin-like domain... 97 7.5e-05 1
UNIPROTKB|Q9KVL8 - symbol:cyaY "Protein CyaY" species:243... 90 0.00048 1
TIGR_CMR|VC_0123 - symbol:VC_0123 "cyaY protein" species:... 90 0.00048 1
>FB|FBgn0030092 [details] [associations]
symbol:fh "frataxin homolog" species:7227 "Drosophila
melanogaster" [GO:0005739 "mitochondrion" evidence=ISS;IMP;NAS]
[GO:0006879 "cellular iron ion homeostasis" evidence=ISS;NAS]
[GO:0004322 "ferroxidase activity" evidence=IEA] [GO:0016226
"iron-sulfur cluster assembly" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008199 "ferric
iron binding" evidence=IEA] [GO:0042542 "response to hydrogen
peroxide" evidence=IMP] [GO:0034986 "iron chaperone activity"
evidence=IDA] [GO:0019896 "axon transport of mitochondrion"
evidence=IDA] [GO:0051881 "regulation of mitochondrial membrane
potential" evidence=IDA] InterPro:IPR002908 InterPro:IPR017789
Pfam:PF01491 PRINTS:PR00904 PROSITE:PS50810 GO:GO:0005739
GO:GO:0006811 EMBL:AE014298 GO:GO:0051881 GO:GO:0006879
GO:GO:0016226 GO:GO:0019896 GO:GO:0042542 GO:GO:0006783
GO:GO:0008199 GO:GO:0004322 eggNOG:COG1965 Gene3D:3.30.920.10
InterPro:IPR020895 SUPFAM:SSF55387 TIGRFAMs:TIGR03421
PROSITE:PS01344 PANTHER:PTHR16821 TIGRFAMs:TIGR03422
GeneTree:ENSGT00390000005811 GO:GO:0034986 EMBL:AJ002208
EMBL:AF208491 EMBL:AF208492 EMBL:AY094649 RefSeq:NP_511094.1
UniGene:Dm.2903 ProteinModelPortal:Q9W385 SMR:Q9W385 IntAct:Q9W385
STRING:Q9W385 PaxDb:Q9W385 PRIDE:Q9W385 EnsemblMetazoa:FBtr0071348
GeneID:31845 KEGG:dme:Dmel_CG8971 CTD:2271 FlyBase:FBgn0030092
InParanoid:Q9W385 OMA:DALCDYF OrthoDB:EOG4FN316 PhylomeDB:Q9W385
GenomeRNAi:31845 NextBio:775622 Bgee:Q9W385 GermOnline:CG8971
Uniprot:Q9W385
Length = 190
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 69/111 (62%), Positives = 84/111 (75%)
Query: 78 YEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQI 137
YE +C++TL++L DYF+ + E + L+ DV Y DGVLTVN G HGTYVINRQTPNKQI
Sbjct: 73 YERVCSDTLDALCDYFEELTENASELQGTDVAYSDGVLTVNLGGQHGTYVINRQTPNKQI 132
Query: 138 WLSSPTSGPKRYDF--DPSRNIWIYKHDNKSLHDLLQEEIVTIVTS-NVDF 185
WLSSPTSGPKRYDF + WIYKH +SLH+LLQ+EI I+ S +VDF
Sbjct: 133 WLSSPTSGPKRYDFVGTVAAGRWIYKHSGQSLHELLQQEIPGILKSQSVDF 183
>UNIPROTKB|I3LTK1 [details] [associations]
symbol:FXN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090201 "negative regulation of release of cytochrome c
from mitochondria" evidence=IEA] [GO:0070301 "cellular response to
hydrogen peroxide" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur
cluster binding" evidence=IEA] [GO:0051353 "positive regulation of
oxidoreductase activity" evidence=IEA] [GO:0051349 "positive
regulation of lyase activity" evidence=IEA] [GO:0051347 "positive
regulation of transferase activity" evidence=IEA] [GO:0048554
"positive regulation of metalloenzyme activity" evidence=IEA]
[GO:0046621 "negative regulation of organ growth" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0040015 "negative regulation of multicellular
organism growth" evidence=IEA] [GO:0034986 "iron chaperone
activity" evidence=IEA] [GO:0030307 "positive regulation of cell
growth" evidence=IEA] [GO:0019230 "proprioception" evidence=IEA]
[GO:0018283 "iron incorporation into metallo-sulfur cluster"
evidence=IEA] [GO:0016540 "protein autoprocessing" evidence=IEA]
[GO:0010722 "regulation of ferrochelatase activity" evidence=IEA]
[GO:0010039 "response to iron ion" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IEA]
[GO:0009060 "aerobic respiration" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0008198 "ferrous iron binding" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0006879 "cellular iron ion
homeostasis" evidence=IEA] [GO:0006119 "oxidative phosphorylation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008199 "ferric iron binding"
evidence=IEA] [GO:0004322 "ferroxidase activity" evidence=IEA]
InterPro:IPR002908 InterPro:IPR017789 Pfam:PF01491 PRINTS:PR00904
PROSITE:PS50810 GO:GO:0005829 GO:GO:0005739 GO:GO:0009792
GO:GO:0043066 GO:GO:0030307 GO:GO:0070301 GO:GO:0008198
GO:GO:0008284 GO:GO:0006879 GO:GO:0006119 GO:GO:0051353
GO:GO:0010039 GO:GO:0051537 GO:GO:0040015 GO:GO:0009060
GO:GO:0007005 GO:GO:0090201 GO:GO:0046621 GO:GO:0051347
GO:GO:0007628 GO:GO:0048554 GO:GO:0008199 GO:GO:0004322
GO:GO:0016540 Gene3D:3.30.920.10 InterPro:IPR020895 SUPFAM:SSF55387
TIGRFAMs:TIGR03421 PROSITE:PS01344 PANTHER:PTHR16821 GO:GO:0051349
TIGRFAMs:TIGR03422 GeneTree:ENSGT00390000005811 OMA:KQSVCLM
GO:GO:0034986 GO:GO:0018283 GO:GO:0019230 GO:GO:0010722
EMBL:FP085366 RefSeq:XP_003480578.1 Ensembl:ENSSSCT00000027067
GeneID:100737749 KEGG:ssc:100737749 Uniprot:I3LTK1
Length = 215
Score = 318 (117.0 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 60/124 (48%), Positives = 86/124 (69%)
Query: 71 GSISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINR 130
GS+ YE + ETL+SL ++F+ + ++ E+ DV++G GVLT+ G GTYVIN+
Sbjct: 89 GSLDDTTYERLAEETLDSLAEFFEDLADKPFTFEDYDVSFGSGVLTIKLGGDLGTYVINK 148
Query: 131 QTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDFYSNCS 190
QTPNKQIWLSSP+SGPKRYD+ + W+Y HD SLH+LL E+ T + + +D S+ +
Sbjct: 149 QTPNKQIWLSSPSSGPKRYDWTGTN--WVYSHDGVSLHELLARELTTALKTKLDL-SSLA 205
Query: 191 HSGK 194
+SGK
Sbjct: 206 YSGK 209
Score = 43 (20.2 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 16 KCLRQVKCVQSYSRCVCN--SNGIIGH-GS 42
+CL Q+ V+ S C+ N + G +G+ GS
Sbjct: 61 RCLNQILNVKKQSICLMNLRTTGTLGNAGS 90
>MGI|MGI:1096879 [details] [associations]
symbol:Fxn "frataxin" species:10090 "Mus musculus"
[GO:0004322 "ferroxidase activity" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO] [GO:0006119
"oxidative phosphorylation" evidence=IMP] [GO:0006783 "heme
biosynthetic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006879
"cellular iron ion homeostasis" evidence=ISO;IMP] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0007628 "adult
walking behavior" evidence=IMP] [GO:0008198 "ferrous iron binding"
evidence=ISO] [GO:0008199 "ferric iron binding" evidence=ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0009060 "aerobic respiration" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010039 "response to iron ion" evidence=ISO]
[GO:0010722 "regulation of ferrochelatase activity" evidence=ISO]
[GO:0016226 "iron-sulfur cluster assembly" evidence=IMP]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016540
"protein autoprocessing" evidence=ISO] [GO:0018283 "iron
incorporation into metallo-sulfur cluster" evidence=ISO]
[GO:0019230 "proprioception" evidence=IMP] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0030307 "positive regulation of cell
growth" evidence=ISO] [GO:0034986 "iron chaperone activity"
evidence=ISO] [GO:0040015 "negative regulation of multicellular
organism growth" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO] [GO:0045773 "positive regulation
of axon extension" evidence=ISO] [GO:0046621 "negative regulation
of organ growth" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048554 "positive regulation of metalloenzyme
activity" evidence=ISO] [GO:0051347 "positive regulation of
transferase activity" evidence=ISO] [GO:0051349 "positive
regulation of lyase activity" evidence=ISO] [GO:0051353 "positive
regulation of oxidoreductase activity" evidence=ISO] [GO:0051536
"iron-sulfur cluster binding" evidence=ISO] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=ISO] [GO:0055072 "iron ion
homeostasis" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0070301 "cellular response to hydrogen
peroxide" evidence=ISO] [GO:0090201 "negative regulation of release
of cytochrome c from mitochondria" evidence=ISO] InterPro:IPR002908
InterPro:IPR017789 Pfam:PF01491 PRINTS:PR00904 PROSITE:PS50810
EMBL:U95736 MGI:MGI:1096879 GO:GO:0005829 GO:GO:0005739
GO:GO:0009792 GO:GO:0043066 GO:GO:0070301 GO:GO:0042493
GO:GO:0008198 GO:GO:0008284 GO:GO:0006811 GO:GO:0006879
GO:GO:0016226 GO:GO:0006119 GO:GO:0051353 GO:GO:0014070
GO:GO:0010039 GO:GO:0045773 GO:GO:0051537 GO:GO:0040015
GO:GO:0009060 GO:GO:0006783 GO:GO:0007005 GO:GO:0090201
GO:GO:0046621 GO:GO:0051347 GO:GO:0007628 GO:GO:0048554
GO:GO:0008199 GO:GO:0004322 GO:GO:0016540 eggNOG:COG1965
Gene3D:3.30.920.10 InterPro:IPR020895 SUPFAM:SSF55387
TIGRFAMs:TIGR03421 PROSITE:PS01344 PANTHER:PTHR16821 GO:GO:0051349
HOGENOM:HOG000190729 TIGRFAMs:TIGR03422 CTD:2395 HOVERGEN:HBG005745
OMA:KQSVCLM OrthoDB:EOG4ZCT5S GO:GO:0034986 GO:GO:0018283
GO:GO:0019230 GO:GO:0010722 IPI:IPI00136201 RefSeq:NP_032070.1
UniGene:Mm.7319 ProteinModelPortal:O35943 SMR:O35943 STRING:O35943
PhosphoSite:O35943 PaxDb:O35943 PRIDE:O35943
Ensembl:ENSMUST00000081333 GeneID:14297 KEGG:mmu:14297
InParanoid:O35943 NextBio:285709 Bgee:O35943 CleanEx:MM_FXN
Genevestigator:O35943 GermOnline:ENSMUSG00000059363 Uniprot:O35943
Length = 207
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 68/137 (49%), Positives = 95/137 (69%)
Query: 60 IHCRNLCSSLTGSISLPE--YEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTV 117
+H RNL +L SL E YE + ETL+SL ++F+ + ++ LE+ DV++GDGVLT+
Sbjct: 73 VHLRNL-GTLDNPSSLDETAYERLAEETLDSLAEFFEDLADKPYTLEDYDVSFGDGVLTI 131
Query: 118 NFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVT 177
G GTYVIN+QTPNKQIWLSSP+SGPKRYD+ +N W+Y HD SLH+LL E+
Sbjct: 132 KLGGDLGTYVINKQTPNKQIWLSSPSSGPKRYDWT-GKN-WVYSHDGVSLHELLARELTK 189
Query: 178 IVTSNVDFYSNCSHSGK 194
+ + +D S+ ++SGK
Sbjct: 190 ALNTKLDL-SSLAYSGK 205
>ZFIN|ZDB-GENE-070209-286 [details] [associations]
symbol:fxn "frataxin" species:7955 "Danio rerio"
[GO:0004322 "ferroxidase activity" evidence=IEA] [GO:0016226
"iron-sulfur cluster assembly" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008199 "ferric iron binding"
evidence=IEA] InterPro:IPR002908 InterPro:IPR017789 Pfam:PF01491
PRINTS:PR00904 PROSITE:PS50810 ZFIN:ZDB-GENE-070209-286
GO:GO:0005739 GO:GO:0016226 GO:GO:0008199 GO:GO:0004322
Gene3D:3.30.920.10 InterPro:IPR020895 SUPFAM:SSF55387
TIGRFAMs:TIGR03421 PROSITE:PS01344 PANTHER:PTHR16821
HOGENOM:HOG000190729 TIGRFAMs:TIGR03422
GeneTree:ENSGT00390000005811 HOVERGEN:HBG005745 EMBL:CT025876
IPI:IPI00490017 UniGene:Dr.2525 SMR:B0V2S4
Ensembl:ENSDART00000142577 OMA:ERWVYTH Uniprot:B0V2S4
Length = 200
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 78/196 (39%), Positives = 111/196 (56%)
Query: 4 CRISSYVSNNVGKCLRQVKCVQSYSRCVCNSNG--IIGHGSHRKTLVQSQDNVLNFTGIH 61
CR+ ++ KC +Q+ + + S + + +G + + Q D +LN +H
Sbjct: 9 CRLYQLSLSSRWKCYQQISRLSTMSSGLNSISGGRSVSSANICGRHTQCFDRILNKRDLH 68
Query: 62 CRNLCSSLTG----SISLPEYEVICNETLESLTDYFDVIVEEN-THLENADVTYGDGVLT 116
IS EYE + ETL++L DYF+ + +EN T L+ DV + +GVLT
Sbjct: 69 LSAPLGEEKAHHLREISEAEYERLAEETLDALADYFEDLTDENFTGLDY-DVVFSNGVLT 127
Query: 117 VNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIV 176
V G+ HGTYVIN+QTPN+QIWLSSPTSGPKRYD+ R W+Y HD LH LL +E+
Sbjct: 128 VKVGSDHGTYVINKQTPNRQIWLSSPTSGPKRYDWTGER--WVYTHDAVPLHSLLSKELS 185
Query: 177 TIVTSNVDFYSNCSHS 192
I +N+D S+ HS
Sbjct: 186 IIFKTNIDL-SHLIHS 200
>UNIPROTKB|C9JAX1 [details] [associations]
symbol:FXN "Frataxin, mitochondrial" species:9606 "Homo
sapiens" [GO:0004322 "ferroxidase activity" evidence=IEA]
[GO:0008199 "ferric iron binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006119 "oxidative
phosphorylation" evidence=IEA] [GO:0006879 "cellular iron ion
homeostasis" evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0009060 "aerobic respiration" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IEA]
[GO:0014070 "response to organic cyclic compound" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=IEA]
[GO:0019230 "proprioception" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IEA] [GO:0042493 "response
to drug" evidence=IEA] [GO:0045773 "positive regulation of axon
extension" evidence=IEA] [GO:0046621 "negative regulation of organ
growth" evidence=IEA] InterPro:IPR002908 InterPro:IPR017789
Pfam:PF01491 PRINTS:PR00904 PROSITE:PS50810 GO:GO:0005739
GO:GO:0009792 GO:GO:0042493 GO:GO:0006879 GO:GO:0016226
GO:GO:0006119 GO:GO:0014070 GO:GO:0045773 GO:GO:0040015
GO:GO:0009060 GO:GO:0007005 GO:GO:0046621 GO:GO:0007628
GO:GO:0008199 GO:GO:0004322 Gene3D:3.30.920.10 InterPro:IPR020895
SUPFAM:SSF55387 TIGRFAMs:TIGR03421 PROSITE:PS01344
PANTHER:PTHR16821 HOGENOM:HOG000190729 TIGRFAMs:TIGR03422
GO:GO:0019230 EMBL:AL162730 HGNC:HGNC:3951 IPI:IPI00946824
ProteinModelPortal:C9JAX1 SMR:C9JAX1 STRING:C9JAX1
Ensembl:ENST00000498653 ArrayExpress:C9JAX1 Bgee:C9JAX1
Uniprot:C9JAX1
Length = 135
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 61/124 (49%), Positives = 86/124 (69%)
Query: 71 GSISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINR 130
GS+ YE + ETL+SL ++F+ + ++ E+ DV++G GVLTV G GTYVIN+
Sbjct: 13 GSLDETTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGGDLGTYVINK 72
Query: 131 QTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDFYSNCS 190
QTPNKQIWLSSP+SGPKRYD+ +N W+Y HD SLH+LL E+ + + +D S+ +
Sbjct: 73 QTPNKQIWLSSPSSGPKRYDWT-GKN-WVYSHDGVSLHELLAAELTKALKTKLDL-SSLA 129
Query: 191 HSGK 194
+SGK
Sbjct: 130 YSGK 133
>UNIPROTKB|Q16595 [details] [associations]
symbol:FXN "Frataxin, mitochondrial" species:9606 "Homo
sapiens" [GO:0006811 "ion transport" evidence=IEA] [GO:0006119
"oxidative phosphorylation" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0009060 "aerobic respiration"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IEA] [GO:0014070 "response to organic cyclic
compound" evidence=IEA] [GO:0019230 "proprioception" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0046621 "negative
regulation of organ growth" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004322 "ferroxidase activity"
evidence=IDA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IDA] [GO:0051349 "positive regulation of lyase activity"
evidence=IMP;IDA] [GO:0090201 "negative regulation of release of
cytochrome c from mitochondria" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030307 "positive regulation of cell growth" evidence=IMP]
[GO:0048554 "positive regulation of metalloenzyme activity"
evidence=IMP] [GO:0005759 "mitochondrial matrix" evidence=ISS;NAS]
[GO:0008198 "ferrous iron binding" evidence=IDA] [GO:0008199
"ferric iron binding" evidence=IDA] [GO:0016540 "protein
autoprocessing" evidence=IDA] [GO:0018283 "iron incorporation into
metallo-sulfur cluster" evidence=IDA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IDA] [GO:0051537 "2 iron, 2 sulfur
cluster binding" evidence=IDA] [GO:0006783 "heme biosynthetic
process" evidence=NAS] [GO:0010039 "response to iron ion"
evidence=IMP] [GO:0034986 "iron chaperone activity" evidence=IDA]
[GO:0010722 "regulation of ferrochelatase activity" evidence=IDA]
[GO:0006879 "cellular iron ion homeostasis" evidence=IMP]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0051347 "positive regulation of transferase
activity" evidence=IMP] [GO:0051353 "positive regulation of
oxidoreductase activity" evidence=IMP] Reactome:REACT_17015
Reactome:REACT_111217 InterPro:IPR002908 InterPro:IPR017789
Pfam:PF01491 PRINTS:PR00904 PROSITE:PS50810 GO:GO:0005829
GO:GO:0009792 GO:GO:0043066 GO:GO:0030307 GO:GO:0070301
GO:GO:0042493 GO:GO:0008198 GO:GO:0005759 GO:GO:0008284
GO:GO:0006811 GO:GO:0006879 GO:GO:0006119 GO:GO:0051353
GO:GO:0014070 GO:GO:0010039 GO:GO:0045773 GO:GO:0051537
GO:GO:0040015 GO:GO:0009060 GO:GO:0006783 GO:GO:0007005
GO:GO:0090201 GO:GO:0046621 GO:GO:0051347 GO:GO:0007628
GO:GO:0048554 GO:GO:0008199 GO:GO:0004322 GO:GO:0016540
eggNOG:COG1965 Gene3D:3.30.920.10 InterPro:IPR020895
SUPFAM:SSF55387 TIGRFAMs:TIGR03421 PROSITE:PS01344
PANTHER:PTHR16821 GO:GO:0051349 HOGENOM:HOG000190729
TIGRFAMs:TIGR03422 CTD:2395 HOVERGEN:HBG005745 OMA:KQSVCLM
OrthoDB:EOG4ZCT5S GO:GO:0034986 GO:GO:0018283 GO:GO:0019230
GO:GO:0010722 EMBL:U43747 EMBL:U43752 EMBL:U43748 EMBL:U43749
EMBL:U43750 EMBL:U43751 EMBL:U43753 EMBL:AL162730 EMBL:BC023633
EMBL:BC048097 EMBL:Y13751 EMBL:AF028240 EMBL:U93173 IPI:IPI00217745
IPI:IPI00293425 RefSeq:NP_000135.2 RefSeq:NP_001155178.1
RefSeq:NP_852090.1 UniGene:Hs.20685 PDB:1EKG PDB:1LY7 PDB:3S4M
PDB:3S5D PDB:3S5E PDB:3S5F PDB:3T3J PDB:3T3K PDB:3T3L PDB:3T3T
PDB:3T3X PDBsum:1EKG PDBsum:1LY7 PDBsum:3S4M PDBsum:3S5D
PDBsum:3S5E PDBsum:3S5F PDBsum:3T3J PDBsum:3T3K PDBsum:3T3L
PDBsum:3T3T PDBsum:3T3X ProteinModelPortal:Q16595 SMR:Q16595
IntAct:Q16595 MINT:MINT-2856590 STRING:Q16595 TCDB:9.B.21.1.1
PhosphoSite:Q16595 DMDM:6166193 OGP:Q16595 PaxDb:Q16595
PeptideAtlas:Q16595 PRIDE:Q16595 DNASU:2395 Ensembl:ENST00000377270
Ensembl:ENST00000396364 GeneID:2395 KEGG:hsa:2395 UCSC:uc004aha.2
UCSC:uc011lrr.1 GeneCards:GC09P071650 HGNC:HGNC:3951 HPA:CAB022164
MIM:229300 MIM:606829 neXtProt:NX_Q16595 Orphanet:95
PharmGKB:PA28369 InParanoid:Q16595 PhylomeDB:Q16595
EvolutionaryTrace:Q16595 GenomeRNAi:2395 NextBio:9641
ArrayExpress:Q16595 Bgee:Q16595 CleanEx:HS_FXN
Genevestigator:Q16595 GermOnline:ENSG00000165060 Uniprot:Q16595
Length = 210
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 61/124 (49%), Positives = 86/124 (69%)
Query: 71 GSISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINR 130
GS+ YE + ETL+SL ++F+ + ++ E+ DV++G GVLTV G GTYVIN+
Sbjct: 88 GSLDETTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGGDLGTYVINK 147
Query: 131 QTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDFYSNCS 190
QTPNKQIWLSSP+SGPKRYD+ +N W+Y HD SLH+LL E+ + + +D S+ +
Sbjct: 148 QTPNKQIWLSSPSSGPKRYDWT-GKN-WVYSHDGVSLHELLAAELTKALKTKLDL-SSLA 204
Query: 191 HSGK 194
+SGK
Sbjct: 205 YSGK 208
>UNIPROTKB|Q05B87 [details] [associations]
symbol:FXN "Frataxin, mitochondrial" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0090201
"negative regulation of release of cytochrome c from mitochondria"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=IEA] [GO:0051353 "positive regulation of oxidoreductase
activity" evidence=IEA] [GO:0051349 "positive regulation of lyase
activity" evidence=IEA] [GO:0051347 "positive regulation of
transferase activity" evidence=IEA] [GO:0048554 "positive
regulation of metalloenzyme activity" evidence=IEA] [GO:0046621
"negative regulation of organ growth" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IEA] [GO:0034986 "iron chaperone activity" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0019230 "proprioception" evidence=IEA] [GO:0018283 "iron
incorporation into metallo-sulfur cluster" evidence=IEA]
[GO:0016540 "protein autoprocessing" evidence=IEA] [GO:0010722
"regulation of ferrochelatase activity" evidence=IEA] [GO:0010039
"response to iron ion" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IEA]
[GO:0009060 "aerobic respiration" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0008198 "ferrous iron binding" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0006879 "cellular iron ion
homeostasis" evidence=IEA] [GO:0006119 "oxidative phosphorylation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004322
"ferroxidase activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006783 "heme biosynthetic process" evidence=IEA]
[GO:0008199 "ferric iron binding" evidence=IEA] InterPro:IPR002908
InterPro:IPR017789 Pfam:PF01491 PRINTS:PR00904 PROSITE:PS50810
GO:GO:0005829 GO:GO:0005739 GO:GO:0009792 GO:GO:0043066
GO:GO:0030307 GO:GO:0070301 GO:GO:0008198 GO:GO:0008284
GO:GO:0006811 GO:GO:0006879 GO:GO:0006119 GO:GO:0051353
GO:GO:0010039 GO:GO:0051537 GO:GO:0040015 GO:GO:0009060
GO:GO:0006783 GO:GO:0007005 GO:GO:0090201 GO:GO:0046621
GO:GO:0051347 GO:GO:0007628 GO:GO:0048554 GO:GO:0008199
GO:GO:0004322 GO:GO:0016540 eggNOG:COG1965 Gene3D:3.30.920.10
InterPro:IPR020895 SUPFAM:SSF55387 TIGRFAMs:TIGR03421
PROSITE:PS01344 PANTHER:PTHR16821 GO:GO:0051349
HOGENOM:HOG000190729 TIGRFAMs:TIGR03422 EMBL:BC122620
IPI:IPI00709291 RefSeq:NP_001074196.1 UniGene:Bt.17029
ProteinModelPortal:Q05B87 SMR:Q05B87 STRING:Q05B87 PRIDE:Q05B87
Ensembl:ENSBTAT00000001725 GeneID:505694 KEGG:bta:505694 CTD:2395
GeneTree:ENSGT00390000005811 HOVERGEN:HBG005745 InParanoid:Q05B87
OMA:KQSVCLM OrthoDB:EOG4ZCT5S NextBio:20867270 GO:GO:0034986
GO:GO:0018283 GO:GO:0019230 GO:GO:0010722 Uniprot:Q05B87
Length = 217
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 61/124 (49%), Positives = 85/124 (68%)
Query: 71 GSISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINR 130
G++ YE + ETL+SL ++F+ + ++ E+ DV++G GVLTV G GTYVIN+
Sbjct: 89 GTLDDTTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGGDLGTYVINK 148
Query: 131 QTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDFYSNCS 190
QTPNKQIWLSSP+SGPKRYD+ RN W+Y HD SLH+LL E+ + + +D S +
Sbjct: 149 QTPNKQIWLSSPSSGPKRYDWT-GRN-WVYSHDGVSLHELLATELTQALKTKLDL-SALA 205
Query: 191 HSGK 194
+SGK
Sbjct: 206 YSGK 209
>UNIPROTKB|F1P1P5 [details] [associations]
symbol:FXN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004322 "ferroxidase activity" evidence=IEA]
[GO:0008199 "ferric iron binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006119 "oxidative phosphorylation" evidence=IEA] [GO:0006879
"cellular iron ion homeostasis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0008198 "ferrous iron binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009060 "aerobic respiration"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IEA] [GO:0010039 "response to iron ion"
evidence=IEA] [GO:0010722 "regulation of ferrochelatase activity"
evidence=IEA] [GO:0016540 "protein autoprocessing" evidence=IEA]
[GO:0018283 "iron incorporation into metallo-sulfur cluster"
evidence=IEA] [GO:0019230 "proprioception" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0034986 "iron chaperone activity" evidence=IEA] [GO:0040015
"negative regulation of multicellular organism growth"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0046621 "negative regulation of organ
growth" evidence=IEA] [GO:0048554 "positive regulation of
metalloenzyme activity" evidence=IEA] [GO:0051347 "positive
regulation of transferase activity" evidence=IEA] [GO:0051349
"positive regulation of lyase activity" evidence=IEA] [GO:0051353
"positive regulation of oxidoreductase activity" evidence=IEA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IEA]
[GO:0090201 "negative regulation of release of cytochrome c from
mitochondria" evidence=IEA] InterPro:IPR002908 InterPro:IPR017789
Pfam:PF01491 PRINTS:PR00904 PROSITE:PS50810 GO:GO:0005829
GO:GO:0005739 GO:GO:0043066 GO:GO:0030307 GO:GO:0070301
GO:GO:0008198 GO:GO:0008284 GO:GO:0006879 GO:GO:0006119
GO:GO:0051353 GO:GO:0010039 GO:GO:0051537 GO:GO:0040015
GO:GO:0009060 GO:GO:0007005 GO:GO:0090201 GO:GO:0046621
GO:GO:0051347 GO:GO:0048554 GO:GO:0008199 GO:GO:0004322
GO:GO:0016540 Gene3D:3.30.920.10 InterPro:IPR020895 SUPFAM:SSF55387
TIGRFAMs:TIGR03421 PROSITE:PS01344 PANTHER:PTHR16821 GO:GO:0051349
TIGRFAMs:TIGR03422 GeneTree:ENSGT00390000005811 GO:GO:0034986
GO:GO:0018283 GO:GO:0010722 OMA:YFDQIAD EMBL:AADN02032846
IPI:IPI00822596 Ensembl:ENSGALT00000038228 ArrayExpress:F1P1P5
Uniprot:F1P1P5
Length = 122
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 64/123 (52%), Positives = 84/123 (68%)
Query: 74 SLPE--YEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQ 131
SL E YE + ETL+SL D+F+ + ++ E+ DV+ G GVLTV G GTYVIN+Q
Sbjct: 2 SLDETTYEKLAEETLDSLADFFEDLTDKPFTPEDYDVSLGSGVLTVKLGGDMGTYVINKQ 61
Query: 132 TPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDFYSNCSH 191
TPN+QIWLSSPTSGPKRYD+ RN W+Y HD SLH+LL +E + + +D S+ +
Sbjct: 62 TPNRQIWLSSPTSGPKRYDWT-GRN-WVYSHDRVSLHELLSKEFSAALKTKLDL-SSLIY 118
Query: 192 SGK 194
SGK
Sbjct: 119 SGK 121
>UNIPROTKB|A6Q0K4 [details] [associations]
symbol:fxn "Frataxin" species:9615 "Canis lupus familiaris"
[GO:0090201 "negative regulation of release of cytochrome c from
mitochondria" evidence=IEA] [GO:0070301 "cellular response to
hydrogen peroxide" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur
cluster binding" evidence=IEA] [GO:0051353 "positive regulation of
oxidoreductase activity" evidence=IEA] [GO:0051349 "positive
regulation of lyase activity" evidence=IEA] [GO:0051347 "positive
regulation of transferase activity" evidence=IEA] [GO:0048554
"positive regulation of metalloenzyme activity" evidence=IEA]
[GO:0046621 "negative regulation of organ growth" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0040015 "negative regulation of multicellular
organism growth" evidence=IEA] [GO:0034986 "iron chaperone
activity" evidence=IEA] [GO:0030307 "positive regulation of cell
growth" evidence=IEA] [GO:0019230 "proprioception" evidence=IEA]
[GO:0018283 "iron incorporation into metallo-sulfur cluster"
evidence=IEA] [GO:0016540 "protein autoprocessing" evidence=IEA]
[GO:0010722 "regulation of ferrochelatase activity" evidence=IEA]
[GO:0010039 "response to iron ion" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IEA]
[GO:0009060 "aerobic respiration" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0008198 "ferrous iron binding" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0006879 "cellular iron ion
homeostasis" evidence=IEA] [GO:0006119 "oxidative phosphorylation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008199 "ferric iron binding"
evidence=IEA] [GO:0004322 "ferroxidase activity" evidence=IEA]
InterPro:IPR002908 InterPro:IPR017789 Pfam:PF01491 PRINTS:PR00904
PROSITE:PS50810 GO:GO:0005829 GO:GO:0005739 GO:GO:0009792
GO:GO:0043066 GO:GO:0030307 GO:GO:0070301 GO:GO:0008198
GO:GO:0008284 GO:GO:0006879 GO:GO:0006119 GO:GO:0051353
GO:GO:0010039 GO:GO:0051537 GO:GO:0040015 GO:GO:0009060
GO:GO:0007005 GO:GO:0090201 GO:GO:0046621 GO:GO:0051347
GO:GO:0007628 GO:GO:0048554 GO:GO:0008199 GO:GO:0004322
GO:GO:0016540 eggNOG:COG1965 Gene3D:3.30.920.10 InterPro:IPR020895
SUPFAM:SSF55387 TIGRFAMs:TIGR03421 PROSITE:PS01344
PANTHER:PTHR16821 GO:GO:0051349 HOGENOM:HOG000190729
TIGRFAMs:TIGR03422 CTD:2395 GeneTree:ENSGT00390000005811
HOVERGEN:HBG005745 OMA:KQSVCLM OrthoDB:EOG4ZCT5S GO:GO:0034986
GO:GO:0018283 GO:GO:0019230 GO:GO:0010722 EMBL:AAEX03000578
EMBL:AAEX03000579 EMBL:AM748733 RefSeq:NP_001103428.1
UniGene:Cfa.9049 SMR:A6Q0K4 STRING:A6Q0K4
Ensembl:ENSCAFT00000045995 GeneID:609051 KEGG:cfa:609051
InParanoid:A6Q0K4 NextBio:20894670 Uniprot:A6Q0K4
Length = 211
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 62/127 (48%), Positives = 85/127 (66%)
Query: 68 SLTGSISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYV 127
S GS+ YE + TL+SL ++F+ + ++ LE+ DV++G GVLTV G GTYV
Sbjct: 86 SSPGSLDETTYERLAETTLDSLAEFFEDLADKPYTLEDYDVSFGSGVLTVKLGGDLGTYV 145
Query: 128 INRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDFYS 187
IN+QTPNKQIWLSSP+SGPKRYD+ +N W+Y HD SLH+LL E+ +D S
Sbjct: 146 INKQTPNKQIWLSSPSSGPKRYDWT-GKN-WVYSHDGVSLHELLATELTKAFKIKLDL-S 202
Query: 188 NCSHSGK 194
+ ++SGK
Sbjct: 203 SLAYSGK 209
>RGD|1565754 [details] [associations]
symbol:Fxn "frataxin" species:10116 "Rattus norvegicus"
[GO:0004322 "ferroxidase activity" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0006119 "oxidative phosphorylation"
evidence=IEA;ISO] [GO:0006783 "heme biosynthetic process"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006879
"cellular iron ion homeostasis" evidence=ISO;NAS] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0007628 "adult
walking behavior" evidence=IEA;ISO] [GO:0008198 "ferrous iron
binding" evidence=IEA;ISO] [GO:0008199 "ferric iron binding"
evidence=IEA;ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA;ISO] [GO:0009060 "aerobic respiration"
evidence=IEA;ISO] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IEA;ISO] [GO:0010039 "response to iron
ion" evidence=IEA;ISO] [GO:0010722 "regulation of ferrochelatase
activity" evidence=IEA;ISO] [GO:0014070 "response to organic cyclic
compound" evidence=IEP] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISO] [GO:0016530 "metallochaperone activity" evidence=NAS]
[GO:0016540 "protein autoprocessing" evidence=IEA;ISO] [GO:0018283
"iron incorporation into metallo-sulfur cluster" evidence=IEA;ISO]
[GO:0019230 "proprioception" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0030307 "positive regulation of cell
growth" evidence=ISO] [GO:0034986 "iron chaperone activity"
evidence=IEA;ISO] [GO:0040015 "negative regulation of multicellular
organism growth" evidence=IEA;ISO] [GO:0042493 "response to drug"
evidence=IEP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0045773 "positive regulation of axon
extension" evidence=IMP] [GO:0046621 "negative regulation of organ
growth" evidence=IEA;ISO] [GO:0048554 "positive regulation of
metalloenzyme activity" evidence=IEA;ISO] [GO:0051347 "positive
regulation of transferase activity" evidence=IEA;ISO] [GO:0051349
"positive regulation of lyase activity" evidence=IEA;ISO]
[GO:0051353 "positive regulation of oxidoreductase activity"
evidence=IEA;ISO] [GO:0051536 "iron-sulfur cluster binding"
evidence=ISO] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=IEA;ISO] [GO:0070301 "cellular response to hydrogen
peroxide" evidence=IEA;ISO] [GO:0090201 "negative regulation of
release of cytochrome c from mitochondria" evidence=IEA;ISO]
InterPro:IPR002908 InterPro:IPR017789 Pfam:PF01491 PRINTS:PR00904
PROSITE:PS50810 RGD:1565754 GO:GO:0005829 GO:GO:0005739
GO:GO:0009792 GO:GO:0043066 GO:GO:0070301 GO:GO:0042493
GO:GO:0008198 GO:GO:0008284 GO:GO:0006811 GO:GO:0006879
GO:GO:0006119 GO:GO:0051353 GO:GO:0014070 GO:GO:0010039
GO:GO:0045773 GO:GO:0051537 GO:GO:0040015 GO:GO:0009060
GO:GO:0006783 GO:GO:0007005 GO:GO:0090201 GO:GO:0046621
GO:GO:0051347 GO:GO:0007628 GO:GO:0048554 GO:GO:0008199
GO:GO:0004322 GO:GO:0016540 Gene3D:3.30.920.10 SUPFAM:SSF55387
TIGRFAMs:TIGR03421 PANTHER:PTHR16821 GO:GO:0051349
TIGRFAMs:TIGR03422 GeneTree:ENSGT00390000005811 OrthoDB:EOG4ZCT5S
GO:GO:0034986 GO:GO:0018283 GO:GO:0019230 GO:GO:0010722
EMBL:AABR03005338 EMBL:AABR03006217 EMBL:AABR03009513
IPI:IPI00389333 UniGene:Rn.13133 PRIDE:D3ZYW7
Ensembl:ENSRNOT00000020412 UCSC:RGD:1565754 GO:GO:0016530
Uniprot:D3ZYW7
Length = 208
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 59/137 (43%), Positives = 88/137 (64%)
Query: 60 IHCRNLCSSLTGSISLPE--YEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTV 117
+H RN +L SL E YE + ETL++L ++F+ + ++ L++ DV++GDGVLT+
Sbjct: 74 VHLRN-SGTLGNPSSLDETAYERLAEETLDALAEFFEDLADKPYTLKDYDVSFGDGVLTI 132
Query: 118 NFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVT 177
G GTYVIN+QTP +W S P SGPKRYD+ +N W+Y HD SLH+LL E+
Sbjct: 133 KLGGDLGTYVINKQTPLLYLWFSGPCSGPKRYDWT-GKN-WVYSHDGVSLHELLARELTE 190
Query: 178 IVTSNVDFYSNCSHSGK 194
+ + +D S+ ++SGK
Sbjct: 191 ALNTKLDL-SSLAYSGK 206
>WB|WBGene00001486 [details] [associations]
symbol:frh-1 species:6239 "Caenorhabditis elegans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=IEA;ISS;IDA] [GO:0008199
"ferric iron binding" evidence=IEA] [GO:0004322 "ferroxidase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006950 "response to stress" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0007631
"feeding behavior" evidence=IMP] [GO:0040017 "positive regulation
of locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0000303 "response to superoxide" evidence=IMP] [GO:0042542
"response to hydrogen peroxide" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] InterPro:IPR002908 InterPro:IPR017789 Pfam:PF01491
PRINTS:PR00904 PROSITE:PS50810 GO:GO:0005739 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0040010
GO:GO:0002119 GO:GO:0007631 GO:GO:0006811 GO:GO:0040011
GO:GO:0040017 GO:GO:0040018 GO:GO:0006879 GO:GO:0016226
GO:GO:0042542 GO:GO:0006783 GO:GO:0008199 GO:GO:0004322
EMBL:FO081244 eggNOG:COG1965 Gene3D:3.30.920.10 InterPro:IPR020895
SUPFAM:SSF55387 TIGRFAMs:TIGR03421 PROSITE:PS01344
PANTHER:PTHR16821 GO:GO:0000303 HOGENOM:HOG000190729
TIGRFAMs:TIGR03422 GeneTree:ENSGT00390000005811 EMBL:AY048153
PIR:T34316 RefSeq:NP_495183.1 UniGene:Cel.20708
ProteinModelPortal:Q9TY03 SMR:Q9TY03 IntAct:Q9TY03 STRING:Q9TY03
PaxDb:Q9TY03 EnsemblMetazoa:F59G1.7.1 EnsemblMetazoa:F59G1.7.2
GeneID:174002 KEGG:cel:CELE_F59G1.7 UCSC:F59G1.7.1 CTD:174002
WormBase:F59G1.7 InParanoid:Q9TY03 OMA:YFDQIAD NextBio:882063
Uniprot:Q9TY03
Length = 136
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 56/110 (50%), Positives = 68/110 (61%)
Query: 77 EYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQ 136
EYE + TLE L+DYFD I + E DV++ GVLTVN GTYVIN+Q+PNKQ
Sbjct: 24 EYETAADSTLERLSDYFDQIADSFPVSEQFDVSHAMGVLTVNVSKSVGTYVINKQSPNKQ 83
Query: 137 IWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSN-VDF 185
IWLSSP SGPKRYD + W Y HD + L LL E I+ + +DF
Sbjct: 84 IWLSSPMSGPKRYDLEEEGK-WTYAHDGEQLDSLLNREFRKILADDRIDF 132
>UNIPROTKB|E1C7H4 [details] [associations]
symbol:FXN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004322 "ferroxidase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0008199 "ferric iron
binding" evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR002908 InterPro:IPR017789 Pfam:PF01491
PRINTS:PR00904 PROSITE:PS50810 GO:GO:0005739 GO:GO:0016226
GO:GO:0008199 GO:GO:0004322 Gene3D:3.30.920.10 InterPro:IPR020895
SUPFAM:SSF55387 TIGRFAMs:TIGR03421 PROSITE:PS01344
PANTHER:PTHR16821 TIGRFAMs:TIGR03422 GeneTree:ENSGT00390000005811
EMBL:AADN02032846 IPI:IPI00594128 Ensembl:ENSGALT00000024376
ArrayExpress:E1C7H4 Uniprot:E1C7H4
Length = 99
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 48/83 (57%), Positives = 60/83 (72%)
Query: 112 DGVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLL 171
+GVLTV G GTYVIN+QTPN+QIWLSSPTSGPKRYD+ RN W+Y HD SLH+LL
Sbjct: 18 NGVLTVKLGGDMGTYVINKQTPNRQIWLSSPTSGPKRYDWT-GRN-WVYSHDRVSLHELL 75
Query: 172 QEEIVTIVTSNVDFYSNCSHSGK 194
+E + + +D S+ +SGK
Sbjct: 76 SKEFSAALKTKLDL-SSLIYSGK 97
>UNIPROTKB|H7C585 [details] [associations]
symbol:FXN "Frataxin, mitochondrial" species:9606 "Homo
sapiens" [GO:0004322 "ferroxidase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0008199 "ferric iron
binding" evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR002908 InterPro:IPR017789 Pfam:PF01491
PRINTS:PR00904 PROSITE:PS50810 GO:GO:0005739 GO:GO:0016226
GO:GO:0008199 GO:GO:0004322 Gene3D:3.30.920.10 InterPro:IPR020895
SUPFAM:SSF55387 TIGRFAMs:TIGR03421 PROSITE:PS01344
PANTHER:PTHR16821 TIGRFAMs:TIGR03422 EMBL:AL162730 HGNC:HGNC:3951
ProteinModelPortal:H7C585 Ensembl:ENST00000484259 Uniprot:H7C585
Length = 108
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 47/82 (57%), Positives = 60/82 (73%)
Query: 113 GVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQ 172
GVLTV G GTYVIN+QTPNKQIWLSSP+SGPKRYD+ +N W+Y HD SLH+LL
Sbjct: 28 GVLTVKLGGDLGTYVINKQTPNKQIWLSSPSSGPKRYDWT-GKN-WVYSHDGVSLHELLA 85
Query: 173 EEIVTIVTSNVDFYSNCSHSGK 194
E+ + + +D S+ ++SGK
Sbjct: 86 AELTKALKTKLDL-SSLAYSGK 106
>TAIR|locus:2125477 [details] [associations]
symbol:FH "frataxin homolog" species:3702 "Arabidopsis
thaliana" [GO:0004322 "ferroxidase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0009060 "aerobic respiration"
evidence=IMP] [GO:0042542 "response to hydrogen peroxide"
evidence=IMP] [GO:0006979 "response to oxidative stress"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=RCA]
[GO:0051301 "cell division" evidence=RCA] InterPro:IPR002908
InterPro:IPR017789 Pfam:PF01491 PROSITE:PS50810 GO:GO:0005739
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006811 GO:GO:0006879
GO:GO:0016226 GO:GO:0042542 GO:GO:0009060 GO:GO:0006783
GO:GO:0008199 GO:GO:0004322 EMBL:AL161496 EMBL:AC005275
eggNOG:COG1965 Gene3D:3.30.920.10 InterPro:IPR020895
SUPFAM:SSF55387 TIGRFAMs:TIGR03421 PROSITE:PS01344
PANTHER:PTHR16821 EMBL:AY649366 EMBL:BT014964 EMBL:AK176448
EMBL:AK176831 IPI:IPI00527007 PIR:B85041 RefSeq:NP_192233.2
UniGene:At.50317 ProteinModelPortal:Q9ZR07 SMR:Q9ZR07 STRING:Q9ZR07
PaxDb:Q9ZR07 PRIDE:Q9ZR07 EnsemblPlants:AT4G03240.1 GeneID:828013
KEGG:ath:AT4G03240 TAIR:At4g03240 HOGENOM:HOG000190729
InParanoid:Q9ZR07 OMA:QIDGFDI PhylomeDB:Q9ZR07
ProtClustDB:CLSN2918569 Genevestigator:Q9ZR07 GermOnline:AT4G03240
TIGRFAMs:TIGR03422 Uniprot:Q9ZR07
Length = 187
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 45/93 (48%), Positives = 61/93 (65%)
Query: 83 NETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQIWLSSP 142
N LE + DY D N ++ D+ YG+ VLT+ G+ GTYV+N+QTPN+QIW+SSP
Sbjct: 90 NHLLEKIEDYGD-----NVQIDGFDIDYGNEVLTLKLGSL-GTYVLNKQTPNRQIWMSSP 143
Query: 143 TSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEI 175
SGP R+D+D N WIY+ LH LL+EE+
Sbjct: 144 VSGPSRFDWDRDANAWIYRRTEAKLHKLLEEEL 176
>CGD|CAL0004482 [details] [associations]
symbol:YFH1 species:5476 "Candida albicans" [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0034986
"iron chaperone activity" evidence=IEA] [GO:0004322 "ferroxidase
activity" evidence=IEA] [GO:0008198 "ferrous iron binding"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0006879 "cellular iron ion homeostasis" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=IEA]
[GO:0006749 "glutathione metabolic process" evidence=IEA]
InterPro:IPR002908 InterPro:IPR017789 Pfam:PF01491 PROSITE:PS50810
CGD:CAL0004482 GO:GO:0005739 GO:GO:0034599 GO:GO:0016226
GO:GO:0008199 GO:GO:0004322 eggNOG:COG1965 Gene3D:3.30.920.10
HAMAP:MF_00142 InterPro:IPR020895 SUPFAM:SSF55387
TIGRFAMs:TIGR03421 PROSITE:PS01344 PANTHER:PTHR16821
TIGRFAMs:TIGR03422 EMBL:AACQ01000194 EMBL:AACQ01000193
RefSeq:XP_711520.1 RefSeq:XP_711541.1 ProteinModelPortal:Q59PA3
STRING:Q59PA3 GeneID:3646853 GeneID:3646874 KEGG:cal:CaO19.1413
KEGG:cal:CaO19.8989 Uniprot:Q59PA3
Length = 177
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 52/109 (47%), Positives = 63/109 (57%)
Query: 77 EYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQ 136
EY + NE LE+L+D + E N E D GVLT+ P+GTYVIN+Q PNKQ
Sbjct: 70 EYAKVSNEYLENLSDSLE---ELNEDFEQVDSELSQGVLTLTLP-PNGTYVINKQPPNKQ 125
Query: 137 IWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDF 185
IWLSSP SGPKRYD + W+ D SL LL+EEI T + F
Sbjct: 126 IWLSSPISGPKRYDLIGGK--WVTLRDGSSLTSLLEEEISTAIGQEFKF 172
>UNIPROTKB|Q59PA3 [details] [associations]
symbol:YFH1 "Putative uncharacterized protein YFH1"
species:237561 "Candida albicans SC5314" [GO:0034599 "cellular
response to oxidative stress" evidence=IMP] InterPro:IPR002908
InterPro:IPR017789 Pfam:PF01491 PROSITE:PS50810 CGD:CAL0004482
GO:GO:0005739 GO:GO:0034599 GO:GO:0016226 GO:GO:0008199
GO:GO:0004322 eggNOG:COG1965 Gene3D:3.30.920.10 HAMAP:MF_00142
InterPro:IPR020895 SUPFAM:SSF55387 TIGRFAMs:TIGR03421
PROSITE:PS01344 PANTHER:PTHR16821 TIGRFAMs:TIGR03422
EMBL:AACQ01000194 EMBL:AACQ01000193 RefSeq:XP_711520.1
RefSeq:XP_711541.1 ProteinModelPortal:Q59PA3 STRING:Q59PA3
GeneID:3646853 GeneID:3646874 KEGG:cal:CaO19.1413
KEGG:cal:CaO19.8989 Uniprot:Q59PA3
Length = 177
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 52/109 (47%), Positives = 63/109 (57%)
Query: 77 EYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQ 136
EY + NE LE+L+D + E N E D GVLT+ P+GTYVIN+Q PNKQ
Sbjct: 70 EYAKVSNEYLENLSDSLE---ELNEDFEQVDSELSQGVLTLTLP-PNGTYVINKQPPNKQ 125
Query: 137 IWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSNVDF 185
IWLSSP SGPKRYD + W+ D SL LL+EEI T + F
Sbjct: 126 IWLSSPISGPKRYDLIGGK--WVTLRDGSSLTSLLEEEISTAIGQEFKF 172
>DICTYBASE|DDB_G0293246 [details] [associations]
symbol:fxn "frataxin" species:44689 "Dictyostelium
discoideum" [GO:0055114 "oxidation-reduction process" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=IEA]
[GO:0008199 "ferric iron binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0004322 "ferroxidase
activity" evidence=IEA] [GO:0050790 "regulation of catalytic
activity" evidence=ISS] [GO:0030234 "enzyme regulator activity"
evidence=ISS] [GO:0018283 "iron incorporation into metallo-sulfur
cluster" evidence=ISS] [GO:0008198 "ferrous iron binding"
evidence=ISS] [GO:0006879 "cellular iron ion homeostasis"
evidence=IEA;ISS] [GO:0055072 "iron ion homeostasis" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006783 "heme biosynthetic process" evidence=IEA]
InterPro:IPR002908 InterPro:IPR017789 Pfam:PF01491 PROSITE:PS50810
dictyBase:DDB_G0293246 GO:GO:0005739 GO:GO:0030234
GenomeReviews:CM000155_GR GO:GO:0008198 GO:GO:0006811 GO:GO:0006879
EMBL:AAFI02000200 GO:GO:0006783 GO:GO:0008199 GO:GO:0004322
eggNOG:COG1965 Gene3D:3.30.920.10 InterPro:IPR020895
SUPFAM:SSF55387 TIGRFAMs:TIGR03421 PROSITE:PS01344
PANTHER:PTHR16821 TIGRFAMs:TIGR03422 GO:GO:0018283
RefSeq:XP_629221.1 HSSP:Q07540 ProteinModelPortal:Q54C45
STRING:Q54C45 EnsemblProtists:DDB0266646 GeneID:8629103
KEGG:ddi:DDB_G0293246 OMA:QIWWSSP Uniprot:Q54C45
Length = 193
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 47/98 (47%), Positives = 59/98 (60%)
Query: 81 ICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQIWLS 140
I +E E D +++ E NT E +V DGVLT+ GN GTYVIN+QTPN+QIW S
Sbjct: 91 IVDEEFELFVDRLEILSEANT-CEGFEVEGNDGVLTIIVGNK-GTYVINKQTPNRQIWWS 148
Query: 141 SPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTI 178
SP SGPKR+D+D W+ D L LL EI T+
Sbjct: 149 SPLSGPKRFDYDSVEKRWVDNRDGTPLRQLLNSEINTL 186
>POMBASE|SPCC1183.03c [details] [associations]
symbol:fxn1 "frataxin" species:4896
"Schizosaccharomyces pombe" [GO:0004322 "ferroxidase activity"
evidence=IEA] [GO:0005506 "iron ion binding" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005759
"mitochondrial matrix" evidence=ISS] [GO:0006783 "heme biosynthetic
process" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0006879 "cellular iron ion homeostasis" evidence=ISS]
[GO:0008199 "ferric iron binding" evidence=IEA] [GO:0018283 "iron
incorporation into metallo-sulfur cluster" evidence=ISS]
[GO:0030234 "enzyme regulator activity" evidence=ISS] [GO:0072592
"oxygen metabolic process" evidence=ISS] InterPro:IPR002908
InterPro:IPR017789 Pfam:PF01491 PRINTS:PR00904 PROSITE:PS50810
PomBase:SPCC1183.03c GO:GO:0030234 EMBL:CU329672 GO:GO:0005506
GO:GO:0005759 GO:GO:0006811 GO:GO:0006879 GO:GO:0006783
GO:GO:0008199 GO:GO:0004322 eggNOG:COG1965 Gene3D:3.30.920.10
InterPro:IPR020895 SUPFAM:SSF55387 TIGRFAMs:TIGR03421
PROSITE:PS01344 PANTHER:PTHR16821 GO:GO:0072592 TIGRFAMs:TIGR03422
GO:GO:0018283 PIR:T40843 RefSeq:NP_587886.1
ProteinModelPortal:O74831 STRING:O74831 EnsemblFungi:SPCC1183.03c.1
GeneID:2539143 KEGG:spo:SPCC1183.03c OMA:DIDNDIT OrthoDB:EOG4WHCWJ
NextBio:20800315 Uniprot:O74831
Length = 158
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 46/131 (35%), Positives = 71/131 (54%)
Query: 56 NFTGIHCRNLCSSL-TGSISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGV 114
N G+ CR G+++ EY + ++TL+ L D F+ ++EE ++ D+ Y +GV
Sbjct: 24 NVFGLRCRYYSQVRHNGALTDLEYHRVADDTLDVLNDTFEDLLEE-VGKKDYDIQYANGV 82
Query: 115 LTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEE 174
+T+ G GTYVIN+Q P QIWLSSP SGPK Y++ W D +L +L E
Sbjct: 83 ITLMLGEK-GTYVINKQPPAHQIWLSSPVSGPKHYEYSLKSKTWCSTRDEGTLLGILSSE 141
Query: 175 IVTIVTSNVDF 185
+ ++F
Sbjct: 142 FSKWFSRPIEF 152
>UNIPROTKB|G4MRI3 [details] [associations]
symbol:MGG_02435 "Mitochondrial iron uptake protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002908
InterPro:IPR017789 Pfam:PF01491 PROSITE:PS50810 GO:GO:0005739
GO:GO:0016226 EMBL:CM001231 GO:GO:0008199 GO:GO:0004322
Gene3D:3.30.920.10 InterPro:IPR020895 SUPFAM:SSF55387
TIGRFAMs:TIGR03421 PROSITE:PS01344 PANTHER:PTHR16821
TIGRFAMs:TIGR03422 RefSeq:XP_003709222.1 ProteinModelPortal:G4MRI3
EnsemblFungi:MGG_02435T0 GeneID:2681532 KEGG:mgr:MGG_02435
Uniprot:G4MRI3
Length = 202
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 50/116 (43%), Positives = 67/116 (57%)
Query: 77 EYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQ 136
EY I +E L+++ + + E+ + DV Y GVLT+ F P GTYVIN+Q PNKQ
Sbjct: 90 EYHDIADEYLDNVLSKLEDVAEQRP---DVDVEYSSGVLTLAFP-PLGTYVINKQPPNKQ 145
Query: 137 IWLSSPTSGPKRYDF---DPSRNI--------WIYKHDNKSLHDLLQEEI-VTIVT 180
IWLSSP SGPKRYD+ +N W+Y D +L LL EE+ V ++T
Sbjct: 146 IWLSSPVSGPKRYDYVIIGDGQNQKEGTGLGDWVYLRDGSTLSGLLMEELNVDVIT 201
>UNIPROTKB|A8MXJ6 [details] [associations]
symbol:FXN "Frataxin, mitochondrial" species:9606 "Homo
sapiens" [GO:0008199 "ferric iron binding" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=IEA]
InterPro:IPR002908 Pfam:PF01491 PRINTS:PR00904 PROSITE:PS50810
GO:GO:0016226 GO:GO:0008199 Gene3D:3.30.920.10 InterPro:IPR020895
SUPFAM:SSF55387 TIGRFAMs:TIGR03421 PROSITE:PS01344
PANTHER:PTHR16821 HOGENOM:HOG000190729 CTD:2395 HOVERGEN:HBG005745
EMBL:AL162730 RefSeq:NP_852090.1 UniGene:Hs.20685 DNASU:2395
GeneID:2395 KEGG:hsa:2395 HGNC:HGNC:3951 PharmGKB:PA28369
GenomeRNAi:2395 NextBio:9641 IPI:IPI00873180
ProteinModelPortal:A8MXJ6 SMR:A8MXJ6 STRING:A8MXJ6 PRIDE:A8MXJ6
Ensembl:ENST00000396366 UCSC:uc004agz.2 ArrayExpress:A8MXJ6
Bgee:A8MXJ6 Uniprot:A8MXJ6
Length = 196
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 38/73 (52%), Positives = 52/73 (71%)
Query: 71 GSISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINR 130
GS+ YE + ETL+SL ++F+ + ++ E+ DV++G GVLTV G GTYVIN+
Sbjct: 88 GSLDETTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGGDLGTYVINK 147
Query: 131 QTPNKQIWLSSPT 143
QTPNKQIWLSSP+
Sbjct: 148 QTPNKQIWLSSPS 160
>SGD|S000002278 [details] [associations]
symbol:YFH1 "Mitochondrial matrix iron chaperone"
species:4932 "Saccharomyces cerevisiae" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008199 "ferric
iron binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA;IGI;IDA;IMP;IPI] [GO:0004322 "ferroxidase activity"
evidence=IEA;IDA] [GO:0008198 "ferrous iron binding" evidence=IDA]
[GO:0006749 "glutathione metabolic process" evidence=IMP]
[GO:0006879 "cellular iron ion homeostasis"
evidence=IEA;IGI;IDA;IMP] [GO:0034986 "iron chaperone activity"
evidence=IGI;IDA] [GO:0005759 "mitochondrial matrix"
evidence=IEA;IDA] [GO:0006783 "heme biosynthetic process"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055072 "iron ion
homeostasis" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
Reactome:REACT_85873 InterPro:IPR002908 InterPro:IPR017789
Pfam:PF01491 PROSITE:PS50810 SGD:S000002278 GO:GO:0006979
GO:GO:0005743 GO:GO:0005758 GO:GO:0008198 GO:GO:0005759
GO:GO:0006811 EMBL:BK006938 GO:GO:0006879 GO:GO:0016226
GO:GO:0010040 Reactome:REACT_118590 GO:GO:0006783 GO:GO:0008199
GO:GO:0004322 GO:GO:0006121 GO:GO:0006749 eggNOG:COG1965
Gene3D:3.30.920.10 InterPro:IPR020895 SUPFAM:SSF55387
TIGRFAMs:TIGR03421 PROSITE:PS01344 PANTHER:PTHR16821
HOGENOM:HOG000190729 TIGRFAMs:TIGR03422
GeneTree:ENSGT00390000005811 GO:GO:0034986 OrthoDB:EOG4WHCWJ
EMBL:Z74168 EMBL:AY558160 PIR:S67663 RefSeq:NP_010163.1 PDB:2FQL
PDB:2GA5 PDB:3OEQ PDB:3OER PDBsum:2FQL PDBsum:2GA5 PDBsum:3OEQ
PDBsum:3OER ProteinModelPortal:Q07540 SMR:Q07540 DIP:DIP-7485N
IntAct:Q07540 MINT:MINT-4300743 STRING:Q07540 PaxDb:Q07540
EnsemblFungi:YDL120W GeneID:851437 KEGG:sce:YDL120W CYGD:YDL120w
EvolutionaryTrace:Q07540 NextBio:968672 Genevestigator:Q07540
GermOnline:YDL120W Uniprot:Q07540
Length = 174
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 38/111 (34%), Positives = 59/111 (53%)
Query: 72 SISLPEYEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQ 131
++ L +Y ++ L+ L D + + E + DV GV+T+ GTYVIN+Q
Sbjct: 67 NLPLEKYHEEADDYLDHLLDSLEELSEAHPDCI-PDVELSHGVMTLEIP-AFGTYVINKQ 124
Query: 132 TPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTIVTSN 182
PNKQIWL+SP SGP R+D W+ + L D+L EE+ ++ +
Sbjct: 125 PPNKQIWLASPLSGPNRFDL--LNGEWVSLRNGTKLTDILTEEVEKAISKS 173
>ASPGD|ASPL0000051667 [details] [associations]
symbol:AN1986 species:162425 "Emericella nidulans"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008199
"ferric iron binding" evidence=IEA] [GO:0005759 "mitochondrial
matrix" evidence=IEA] [GO:0034986 "iron chaperone activity"
evidence=IEA] [GO:0004322 "ferroxidase activity" evidence=IEA]
[GO:0008198 "ferrous iron binding" evidence=IEA] [GO:0006879
"cellular iron ion homeostasis" evidence=IEA] [GO:0016226
"iron-sulfur cluster assembly" evidence=IEA] [GO:0006749
"glutathione metabolic process" evidence=IEA] InterPro:IPR002908
InterPro:IPR017789 Pfam:PF01491 PROSITE:PS50810 GO:GO:0005739
EMBL:BN001307 GO:GO:0016226 GO:GO:0008199 GO:GO:0004322
eggNOG:COG1965 Gene3D:3.30.920.10 InterPro:IPR020895
SUPFAM:SSF55387 TIGRFAMs:TIGR03421 PROSITE:PS01344
PANTHER:PTHR16821 HOGENOM:HOG000190729 TIGRFAMs:TIGR03422
OrthoDB:EOG4WHCWJ EMBL:AACD01000030 RefSeq:XP_659590.1
ProteinModelPortal:Q5BBU4 STRING:Q5BBU4
EnsemblFungi:CADANIAT00008650 GeneID:2875084 KEGG:ani:AN1986.2
OMA:EGDQMHE Uniprot:Q5BBU4
Length = 211
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 40/123 (32%), Positives = 64/123 (52%)
Query: 72 SISLPEYEVICNETLESLTDYFDVIVE---ENTHLENADVT--YGDGVLTVNFGNPHGTY 126
S+ + E + N +D++ +V+ E + +D+ G+L +N N GTY
Sbjct: 76 SVRVSEPSPLSNHQYHEYSDHYLHVVQAKIEEMEEDRSDLETDLSAGILHINVANV-GTY 134
Query: 127 VINRQTPNKQIWLSSPTSGPKRYDF----D---------PSRN-IWIYKHDNKSLHDLLQ 172
V+N+Q P KQ+WLSSP SGP++YD+ D P N W+ DN +L +LL
Sbjct: 135 VLNKQPPIKQLWLSSPVSGPRQYDWVVEGDQMHEKQETRPFTNGQWVCLRDNSNLTELLN 194
Query: 173 EEI 175
+E+
Sbjct: 195 KEL 197
>UNIPROTKB|Q2GHF0 [details] [associations]
symbol:ECH_0312 "CyaY protein" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002908 Pfam:PF01491 PROSITE:PS50810 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016226 GO:GO:0008199 KO:K06202
Gene3D:3.30.920.10 InterPro:IPR020895 SUPFAM:SSF55387
TIGRFAMs:TIGR03421 PROSITE:PS01344 RefSeq:YP_507133.1
ProteinModelPortal:Q2GHF0 STRING:Q2GHF0 GeneID:3927131
KEGG:ech:ECH_0312 PATRIC:20576129 eggNOG:NOG75057
HOGENOM:HOG000091599 OMA:WVASPIS ProtClustDB:CLSK749339
BioCyc:ECHA205920:GJNR-312-MONOMER Uniprot:Q2GHF0
Length = 109
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 34/109 (31%), Positives = 60/109 (55%)
Query: 69 LTGSISLPEYEVI-CNETLESLTDYFDVI-VEENTHLENADVTYGDGVLTVNFGNPHGTY 126
++ S+ + +++ + CN L +LT D + V+ EN Y DG++ ++ + Y
Sbjct: 1 MSHSLCISDFQNLSCN-LLNTLTAMVDKVDVDGVLECEN----Y-DGLVKIS-DSKGNVY 53
Query: 127 VINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEI 175
VIN+ P+ QIW++SP SG R+++D WI + N L DL + E+
Sbjct: 54 VINKHDPSMQIWIASPISGSVRFNYDRCSGTWI-SNKNDELFDLFKSEM 101
>TIGR_CMR|ECH_0312 [details] [associations]
symbol:ECH_0312 "cyaY protein" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002908 Pfam:PF01491 PROSITE:PS50810 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016226 GO:GO:0008199 KO:K06202
Gene3D:3.30.920.10 InterPro:IPR020895 SUPFAM:SSF55387
TIGRFAMs:TIGR03421 PROSITE:PS01344 RefSeq:YP_507133.1
ProteinModelPortal:Q2GHF0 STRING:Q2GHF0 GeneID:3927131
KEGG:ech:ECH_0312 PATRIC:20576129 eggNOG:NOG75057
HOGENOM:HOG000091599 OMA:WVASPIS ProtClustDB:CLSK749339
BioCyc:ECHA205920:GJNR-312-MONOMER Uniprot:Q2GHF0
Length = 109
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 34/109 (31%), Positives = 60/109 (55%)
Query: 69 LTGSISLPEYEVI-CNETLESLTDYFDVI-VEENTHLENADVTYGDGVLTVNFGNPHGTY 126
++ S+ + +++ + CN L +LT D + V+ EN Y DG++ ++ + Y
Sbjct: 1 MSHSLCISDFQNLSCN-LLNTLTAMVDKVDVDGVLECEN----Y-DGLVKIS-DSKGNVY 53
Query: 127 VINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEI 175
VIN+ P+ QIW++SP SG R+++D WI + N L DL + E+
Sbjct: 54 VINKHDPSMQIWIASPISGSVRFNYDRCSGTWI-SNKNDELFDLFKSEM 101
>UNIPROTKB|P27838 [details] [associations]
symbol:cyaY species:83333 "Escherichia coli K-12"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006461 "protein complex
assembly" evidence=IMP] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA;IGI;IDA] [GO:0008199 "ferric iron binding"
evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008198
"ferrous iron binding" evidence=IDA] InterPro:IPR002908
Pfam:PF01491 PROSITE:PS50810 GO:GO:0005829 GO:GO:0006461
GO:GO:0008198 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016226 EMBL:M87049 GO:GO:0008199
EMBL:X66782 eggNOG:COG1965 HOGENOM:HOG000190728 KO:K06202
OMA:LEFENRS Gene3D:3.30.920.10 HAMAP:MF_00142 InterPro:IPR020895
SUPFAM:SSF55387 TIGRFAMs:TIGR03421 PROSITE:PS01344 PIR:S30697
RefSeq:NP_418251.1 RefSeq:YP_491635.1 PDB:1EW4 PDB:1SOY PDB:2EFF
PDB:2P1X PDBsum:1EW4 PDBsum:1SOY PDBsum:2EFF PDBsum:2P1X
ProteinModelPortal:P27838 SMR:P27838 DIP:DIP-9356N TCDB:9.B.21.2.1
EnsemblBacteria:EBESCT00000002383 EnsemblBacteria:EBESCT00000017597
GeneID:12931677 GeneID:947754 KEGG:ecj:Y75_p3371 KEGG:eco:b3807
PATRIC:32123113 EchoBASE:EB1606 EcoGene:EG11653
ProtClustDB:PRK00446 BioCyc:EcoCyc:EG11653-MONOMER
BioCyc:ECOL316407:JW3779-MONOMER EvolutionaryTrace:P27838
Genevestigator:P27838 Uniprot:P27838
Length = 106
Score = 105 (42.0 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 26/79 (32%), Positives = 36/79 (45%)
Query: 107 DVTYGDGVLTVNFGNPHGTYVINRQTPNKQIWLSSPTSGPKRYDFDPSRNIWIYKHDNKS 166
D GVLT+ F N +INRQ P Q+WL++ G Y FD + WI ++
Sbjct: 31 DCEINGGVLTITFENG-SKIIINRQEPLHQVWLATKQGG---YHFDLKGDEWICDRSGET 86
Query: 167 LHDLLQEEIVTIVTSNVDF 185
DLL++ V F
Sbjct: 87 FWDLLEQAATQQAGETVSF 105
>UNIPROTKB|Q2GLH1 [details] [associations]
symbol:APH_0156 "Frataxin-like domain protein"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002908 Pfam:PF01491 PROSITE:PS50810
GO:GO:0016226 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0008199
Gene3D:3.30.920.10 SUPFAM:SSF55387 eggNOG:NOG75057
HOGENOM:HOG000091599 ProtClustDB:CLSK749339 RefSeq:YP_504780.1
ProteinModelPortal:Q2GLH1 STRING:Q2GLH1 GeneID:3930558
KEGG:aph:APH_0156 PATRIC:20948878
BioCyc:APHA212042:GHPM-191-MONOMER Uniprot:Q2GLH1
Length = 125
Score = 97 (39.2 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 26/101 (25%), Positives = 49/101 (48%)
Query: 78 YEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQI 137
Y + L+SL + L + D + GD V+ ++ G+ Y+I+ +QI
Sbjct: 27 YLDLARGALDSLVSMVEEKSSSAGSLLSCD-SNGD-VVEISDGD--SDYLISWHAQTQQI 82
Query: 138 WLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTI 178
W++SP SG R+ +D + +W + + L +++EI I
Sbjct: 83 WVASPVSGSVRFVYDADQGLWCEQRSGRELFAFVRQEICEI 123
>TIGR_CMR|APH_0156 [details] [associations]
symbol:APH_0156 "frataxin-like domain protein"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002908 Pfam:PF01491 PROSITE:PS50810
GO:GO:0016226 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0008199
Gene3D:3.30.920.10 SUPFAM:SSF55387 eggNOG:NOG75057
HOGENOM:HOG000091599 ProtClustDB:CLSK749339 RefSeq:YP_504780.1
ProteinModelPortal:Q2GLH1 STRING:Q2GLH1 GeneID:3930558
KEGG:aph:APH_0156 PATRIC:20948878
BioCyc:APHA212042:GHPM-191-MONOMER Uniprot:Q2GLH1
Length = 125
Score = 97 (39.2 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 26/101 (25%), Positives = 49/101 (48%)
Query: 78 YEVICNETLESLTDYFDVIVEENTHLENADVTYGDGVLTVNFGNPHGTYVINRQTPNKQI 137
Y + L+SL + L + D + GD V+ ++ G+ Y+I+ +QI
Sbjct: 27 YLDLARGALDSLVSMVEEKSSSAGSLLSCD-SNGD-VVEISDGD--SDYLISWHAQTQQI 82
Query: 138 WLSSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEEIVTI 178
W++SP SG R+ +D + +W + + L +++EI I
Sbjct: 83 WVASPVSGSVRFVYDADQGLWCEQRSGRELFAFVRQEICEI 123
>UNIPROTKB|Q9KVL8 [details] [associations]
symbol:cyaY "Protein CyaY" species:243277 "Vibrio cholerae
O1 biovar El Tor str. N16961" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002908 Pfam:PF01491 PROSITE:PS50810
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0016226 GO:GO:0008199
eggNOG:COG1965 KO:K06202 OMA:LEFENRS Gene3D:3.30.920.10
HAMAP:MF_00142 InterPro:IPR020895 SUPFAM:SSF55387
TIGRFAMs:TIGR03421 PROSITE:PS01344 ProtClustDB:PRK00446 PIR:E82360
RefSeq:NP_229782.1 ProteinModelPortal:Q9KVL8 DNASU:2612963
GeneID:2612963 KEGG:vch:VC0123 PATRIC:20079290 PANTHER:PTHR16821
Uniprot:Q9KVL8
Length = 104
Score = 90 (36.7 bits), Expect = 0.00048, P = 0.00048
Identities = 30/95 (31%), Positives = 42/95 (44%)
Query: 83 NET-LESLTDYFDVIVEENTHLENADVTY--GDGVLTVNFGNPHGTYVINRQTPNKQIWL 139
NET L D +E AD+ Y V+T+ F + +INRQ P ++IWL
Sbjct: 2 NETEFHQLVDSQLERIEAAIDEAGADIDYETSGNVMTLEFDDG-SQIIINRQEPMREIWL 60
Query: 140 SSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEE 174
+S + G Y F WI L LL++E
Sbjct: 61 ASKSGG---YHFKSIDGEWICSKTGLELLTLLKQE 92
>TIGR_CMR|VC_0123 [details] [associations]
symbol:VC_0123 "cyaY protein" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002908 Pfam:PF01491 PROSITE:PS50810 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0016226 GO:GO:0008199
eggNOG:COG1965 KO:K06202 OMA:LEFENRS Gene3D:3.30.920.10
HAMAP:MF_00142 InterPro:IPR020895 SUPFAM:SSF55387
TIGRFAMs:TIGR03421 PROSITE:PS01344 ProtClustDB:PRK00446 PIR:E82360
RefSeq:NP_229782.1 ProteinModelPortal:Q9KVL8 DNASU:2612963
GeneID:2612963 KEGG:vch:VC0123 PATRIC:20079290 PANTHER:PTHR16821
Uniprot:Q9KVL8
Length = 104
Score = 90 (36.7 bits), Expect = 0.00048, P = 0.00048
Identities = 30/95 (31%), Positives = 42/95 (44%)
Query: 83 NET-LESLTDYFDVIVEENTHLENADVTY--GDGVLTVNFGNPHGTYVINRQTPNKQIWL 139
NET L D +E AD+ Y V+T+ F + +INRQ P ++IWL
Sbjct: 2 NETEFHQLVDSQLERIEAAIDEAGADIDYETSGNVMTLEFDDG-SQIIINRQEPMREIWL 60
Query: 140 SSPTSGPKRYDFDPSRNIWIYKHDNKSLHDLLQEE 174
+S + G Y F WI L LL++E
Sbjct: 61 ASKSGG---YHFKSIDGEWICSKTGLELLTLLKQE 92
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 196 196 0.00080 111 3 11 22 0.48 32
31 0.44 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 29
No. of states in DFA: 598 (64 KB)
Total size of DFA: 191 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.48u 0.13s 21.61t Elapsed: 00:00:01
Total cpu time: 21.48u 0.13s 21.61t Elapsed: 00:00:01
Start: Thu Aug 15 16:20:31 2013 End: Thu Aug 15 16:20:32 2013