Query psy10964
Match_columns 103
No_of_seqs 184 out of 1277
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 22:58:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10964.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10964hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lnl_A C-X-C chemokine recepto 99.3 9.7E-12 3.3E-16 85.3 8.4 52 49-100 11-62 (296)
2 4grv_A Neurotensin receptor ty 99.2 4.4E-11 1.5E-15 88.3 6.4 55 48-102 31-88 (510)
3 4ea3_A Fusion protein of nocic 99.1 1.2E-10 4.1E-15 84.0 8.0 60 39-99 116-175 (434)
4 3v2y_A Sphingosine 1-phosphate 99.1 1.2E-10 4E-15 86.1 8.0 52 50-101 64-115 (520)
5 2ks9_A Substance-P receptor; w 99.1 5E-10 1.7E-14 78.3 10.8 52 50-101 33-84 (364)
6 1u19_A Rhodopsin; G protein-co 99.1 8.4E-10 2.9E-14 76.4 10.2 54 48-101 37-90 (349)
7 2rh1_A Beta-2-adrenergic recep 99.1 5.1E-10 1.7E-14 82.2 7.8 54 48-101 39-92 (500)
8 3odu_A C-X-C chemokine recepto 99.1 6.5E-10 2.2E-14 80.6 8.3 53 48-100 47-99 (502)
9 3vw7_A Proteinase-activated re 99.0 5.1E-10 1.7E-14 80.9 7.0 53 48-100 19-71 (484)
10 3uon_A Human M2 muscarinic ace 99.0 5.7E-10 1.9E-14 80.2 7.0 53 49-101 23-75 (467)
11 3pbl_A D(3) dopamine receptor, 99.0 3.5E-10 1.2E-14 81.7 5.7 52 50-101 39-90 (481)
12 4eiy_A Adenosine receptor A2A/ 99.0 8.1E-10 2.8E-14 79.0 7.2 53 49-101 31-83 (447)
13 4dkl_A MU-type opioid receptor 99.0 1.6E-09 5.3E-14 77.7 8.5 52 49-100 17-68 (464)
14 3eml_A Human adenosine A2A rec 99.0 8.3E-10 2.8E-14 79.6 6.6 53 49-101 21-73 (488)
15 2z73_A Rhodopsin; visual pigme 99.0 3.4E-09 1.2E-13 76.3 9.5 54 48-101 33-86 (448)
16 4amj_A Beta-1 adrenergic recep 98.9 1.6E-09 5.4E-14 73.9 6.2 54 48-101 10-63 (315)
17 3rze_A Histamine H1 receptor, 98.9 9.1E-10 3.1E-14 78.8 5.0 52 50-101 9-60 (452)
18 3sn6_R Lysozyme, beta-2 adrene 98.9 2.9E-09 1E-13 78.3 6.5 54 48-101 181-234 (514)
19 2lot_A Apelin receptor; membra 96.8 6.2E-05 2.1E-09 41.4 -2.0 30 51-80 30-59 (64)
20 3arc_I Photosystem II reaction 29.6 43 0.0015 15.9 2.1 16 52-67 11-26 (38)
No 1
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.30 E-value=9.7e-12 Score=85.26 Aligned_cols=52 Identities=31% Similarity=0.496 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh
Q psy10964 49 LLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLL 100 (103)
Q Consensus 49 ~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~ 100 (103)
+.+..++|.+++++|++||+++++++.++|++|+|+|+|+.|||++|+++++
T Consensus 11 ~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l 62 (296)
T 2lnl_A 11 KYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL 62 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH
Confidence 4667788999999999999999999999999999999999999999998865
No 2
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.16 E-value=4.4e-11 Score=88.28 Aligned_cols=55 Identities=36% Similarity=0.597 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHhhc
Q psy10964 48 VLLPITIVYFGIFVTGVIGNIAVCVVIINNTSL---HTATNYYLFSLAVSDLTLLLLG 102 (103)
Q Consensus 48 ~~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l---~~~~~~fl~nLa~~Dll~~~~~ 102 (103)
.+.++.++|.+++++|++||++|++++.+++++ |+++|+|+.|||++|+++++++
T Consensus 31 ~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~ 88 (510)
T 4grv_A 31 SKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLA 88 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 356677899999999999999999998877654 4789999999999999987653
No 3
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.15 E-value=1.2e-10 Score=83.99 Aligned_cols=60 Identities=35% Similarity=0.544 Sum_probs=49.3
Q ss_pred cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Q psy10964 39 RGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLL 99 (103)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~ 99 (103)
.+....+ ..+....+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++.+
T Consensus 116 ~~~~~~~-~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~~ 175 (434)
T 4ea3_A 116 LGAFLPL-GLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVL 175 (434)
T ss_dssp -----CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCh-hHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHHH
Confidence 3443333 45677788999999999999999999999999999999999999999999874
No 4
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.15 E-value=1.2e-10 Score=86.12 Aligned_cols=52 Identities=25% Similarity=0.319 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964 50 LPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL 101 (103)
Q Consensus 50 ~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~ 101 (103)
.+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++++++
T Consensus 64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~ 115 (520)
T 3v2y_A 64 KLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVA 115 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHH
Confidence 5677899999999999999999999999999999999999999999998764
No 5
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.14 E-value=5e-10 Score=78.34 Aligned_cols=52 Identities=31% Similarity=0.540 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964 50 LPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL 101 (103)
Q Consensus 50 ~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~ 101 (103)
.+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++.+++
T Consensus 33 ~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~ 84 (364)
T 2ks9_A 33 VLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAF 84 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHH
Confidence 4457889999999999999999999999999999999999999999998654
No 6
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.10 E-value=8.4e-10 Score=76.44 Aligned_cols=54 Identities=26% Similarity=0.347 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964 48 VLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL 101 (103)
Q Consensus 48 ~~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~ 101 (103)
...+..+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.+++
T Consensus 37 ~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~ 90 (349)
T 1u19_A 37 QFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFG 90 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHh
Confidence 345667888999999999999999999999999999999999999999998764
No 7
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.05 E-value=5.1e-10 Score=82.16 Aligned_cols=54 Identities=35% Similarity=0.431 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964 48 VLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL 101 (103)
Q Consensus 48 ~~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~ 101 (103)
......+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++++++
T Consensus 39 ~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~ 92 (500)
T 2rh1_A 39 WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLA 92 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHH
Confidence 446677889999999999999999999999999999999999999999998765
No 8
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.05 E-value=6.5e-10 Score=80.64 Aligned_cols=53 Identities=30% Similarity=0.488 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh
Q psy10964 48 VLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLL 100 (103)
Q Consensus 48 ~~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~ 100 (103)
.+.+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|+++++
T Consensus 47 ~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~~ 99 (502)
T 3odu_A 47 NKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVI 99 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 45777889999999999999999999999999999999999999999999853
No 9
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.03 E-value=5.1e-10 Score=80.88 Aligned_cols=53 Identities=28% Similarity=0.432 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh
Q psy10964 48 VLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLL 100 (103)
Q Consensus 48 ~~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~ 100 (103)
.+.+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|+++++
T Consensus 19 ~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~ 71 (484)
T 3vw7_A 19 LTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVS 71 (484)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHH
Confidence 45677889999999999999999999999999999999999999999999864
No 10
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.02 E-value=5.7e-10 Score=80.17 Aligned_cols=53 Identities=40% Similarity=0.554 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964 49 LLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL 101 (103)
Q Consensus 49 ~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~ 101 (103)
..+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++++++
T Consensus 23 ~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~ 75 (467)
T 3uon_A 23 VVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVF 75 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHH
Confidence 46677889999999999999999999999999999999999999999998764
No 11
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.02 E-value=3.5e-10 Score=81.65 Aligned_cols=52 Identities=35% Similarity=0.570 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964 50 LPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL 101 (103)
Q Consensus 50 ~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~ 101 (103)
.+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++++++
T Consensus 39 ~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~ 90 (481)
T 3pbl_A 39 AYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATL 90 (481)
T ss_dssp --CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHH
Confidence 4455778999999999999999999999999999999999999999998765
No 12
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.01 E-value=8.1e-10 Score=78.97 Aligned_cols=53 Identities=32% Similarity=0.521 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964 49 LLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL 101 (103)
Q Consensus 49 ~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~ 101 (103)
..+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++++++
T Consensus 31 ~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~ 83 (447)
T 4eiy_A 31 SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVL 83 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHH
Confidence 35667888999999999999999999999999999999999999999998764
No 13
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.00 E-value=1.6e-09 Score=77.71 Aligned_cols=52 Identities=37% Similarity=0.543 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh
Q psy10964 49 LLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLL 100 (103)
Q Consensus 49 ~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~ 100 (103)
..+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|+++++
T Consensus 17 ~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~ 68 (464)
T 4dkl_A 17 AITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATS 68 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHH
Confidence 4667788999999999999999999999999999999999999999998765
No 14
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=98.99 E-value=8.3e-10 Score=79.61 Aligned_cols=53 Identities=32% Similarity=0.521 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964 49 LLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL 101 (103)
Q Consensus 49 ~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~ 101 (103)
..+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++++++
T Consensus 21 ~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~ 73 (488)
T 3eml_A 21 SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVL 73 (488)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHH
Confidence 35667889999999999999999999999999999999999999999998764
No 15
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=98.98 E-value=3.4e-09 Score=76.34 Aligned_cols=54 Identities=30% Similarity=0.342 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964 48 VLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL 101 (103)
Q Consensus 48 ~~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~ 101 (103)
....+.+++.+++++|++||+++++++.+++++|++.|+++.|||++|++++++
T Consensus 33 ~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~ 86 (448)
T 2z73_A 33 VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLV 86 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHH
Confidence 345667888999999999999999999999999999999999999999998764
No 16
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=98.94 E-value=1.6e-09 Score=73.87 Aligned_cols=54 Identities=30% Similarity=0.329 Sum_probs=48.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964 48 VLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL 101 (103)
Q Consensus 48 ~~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~ 101 (103)
.+....+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.+++
T Consensus 10 ~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~ 63 (315)
T 4amj_A 10 WEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLL 63 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHH
Confidence 346677889999999999999999999999999999999999999999987643
No 17
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=98.93 E-value=9.1e-10 Score=78.81 Aligned_cols=52 Identities=31% Similarity=0.429 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964 50 LPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL 101 (103)
Q Consensus 50 ~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~ 101 (103)
.++.+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++.+++
T Consensus 9 ~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~ 60 (452)
T 3rze_A 9 MPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAV 60 (452)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHH
Confidence 4455788999999999999999999999999999999999999999998654
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=98.89 E-value=2.9e-09 Score=78.27 Aligned_cols=54 Identities=35% Similarity=0.431 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964 48 VLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL 101 (103)
Q Consensus 48 ~~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~ 101 (103)
......+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++++++
T Consensus 181 ~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~ 234 (514)
T 3sn6_R 181 WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLA 234 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHH
Confidence 345677889999999999999999999999999999999999999999998654
No 19
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=96.80 E-value=6.2e-05 Score=41.39 Aligned_cols=30 Identities=23% Similarity=0.373 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy10964 51 PITIVYFGIFVTGVIGNIAVCVVIINNTSL 80 (103)
Q Consensus 51 ~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l 80 (103)
+..++|.++|++|++||++++|++.++|.-
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~ 59 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGH 59 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEeccc
Confidence 455789999999999999999999887753
No 20
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=29.56 E-value=43 Score=15.89 Aligned_cols=16 Identities=19% Similarity=0.515 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHHH
Q psy10964 52 ITIVYFGIFVTGVIGN 67 (103)
Q Consensus 52 ~~~~~~~i~~~~~~gN 67 (103)
..+.+..+++.|.+.|
T Consensus 11 vV~ffvsLFiFGfLsn 26 (38)
T 3arc_I 11 VVTFFVLLFVFGFLSG 26 (38)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHccccCC
Confidence 3345566666666555
Done!