Query psy10965
Match_columns 400
No_of_seqs 161 out of 984
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 22:59:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10965.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10965hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bvx_A Alpha-mannosidase 2; fa 100.0 2.7E-83 9.3E-88 705.9 38.1 392 1-399 126-564 (1045)
2 2wyh_A Alpha-mannosidase; hydr 100.0 5.8E-76 2E-80 643.3 29.1 349 1-399 71-435 (923)
3 3lvt_A Glycosyl hydrolase, fam 100.0 1.5E-73 5E-78 620.9 31.6 351 1-399 51-415 (899)
4 1o7d_A Lysosomal alpha-mannosi 100.0 5.5E-61 1.9E-65 459.4 26.0 223 1-227 67-294 (298)
5 1o7d_B Lysosomal alpha-mannosi 99.9 1.7E-22 5.9E-27 154.9 7.9 74 230-304 2-75 (84)
6 1o7d_C Lysosomal alpha-mannosi 99.8 3.5E-20 1.2E-24 161.8 7.1 89 310-399 2-91 (159)
7 1k1x_A 4-alpha-glucanotransfer 99.7 1.7E-15 5.9E-20 159.0 20.9 97 6-106 51-147 (659)
8 3p0b_A TT1467 protein; glycosi 99.1 4E-09 1.4E-13 106.9 17.2 88 14-104 138-243 (540)
9 2b5d_X Alpha-amylase; (beta/al 98.7 1.6E-06 5.5E-11 88.8 22.9 87 16-105 120-208 (528)
10 3n98_A Alpha-amylase, GH57 fam 98.5 1.1E-07 3.8E-12 96.8 7.4 88 14-104 117-220 (562)
11 3rxz_A Polysaccharide deacetyl 96.3 0.12 4.2E-06 48.5 15.7 204 22-263 92-298 (300)
12 3s6o_A Polysaccharide deacetyl 95.3 1.5 5.1E-05 41.5 19.0 80 22-107 116-196 (321)
13 3cl6_A PUUE allantoinase; URIC 94.2 1.5 5.2E-05 41.0 15.9 79 22-106 111-190 (308)
14 2iw0_A Chitin deacetylase; hyd 89.8 0.67 2.3E-05 42.3 7.1 75 21-100 88-163 (254)
15 2cc0_A Acetyl-xylan esterase; 89.3 0.88 3E-05 39.6 7.2 74 22-100 47-121 (195)
16 2c71_A Glycoside hydrolase, fa 89.2 5.2 0.00018 35.3 12.4 61 22-87 49-109 (216)
17 1ny1_A Probable polysaccharide 89.0 0.72 2.5E-05 41.7 6.6 76 22-101 86-162 (240)
18 2y8u_A Chitin deacetylase; hyd 88.8 0.89 3E-05 40.9 7.0 75 22-101 75-150 (230)
19 2j13_A Polysaccharide deacetyl 88.5 0.77 2.6E-05 41.8 6.4 76 22-101 98-174 (247)
20 3vus_A Poly-beta-1,6-N-acetyl- 87.4 2.2 7.5E-05 39.2 8.9 83 21-107 126-236 (268)
21 3qbu_A Putative uncharacterize 86.3 1.3 4.4E-05 42.0 6.9 80 22-105 104-183 (326)
22 2vyo_A ECU11_0510, chitooligos 84.8 1.9 6.6E-05 39.2 7.0 73 23-100 72-149 (254)
23 4f9d_A Poly-beta-1,6-N-acetyl- 71.1 6.9 0.00024 40.4 6.8 83 21-107 130-240 (618)
24 2c1i_A Peptidoglycan glcnac de 65.0 10 0.00034 37.4 6.3 71 22-99 279-349 (431)
25 4hd5_A Polysaccharide deacetyl 64.4 9.2 0.00031 36.7 5.7 79 21-106 247-326 (360)
26 2w3z_A Putative deacetylase; P 63.4 10 0.00034 35.6 5.8 77 21-100 150-236 (311)
27 1u69_A Hypothetical protein; s 49.7 2.5 8.6E-05 35.9 -0.9 16 74-89 105-120 (163)
28 1ldd_A APC2WHB, anaphase promo 43.7 16 0.00056 26.5 2.8 24 18-41 48-72 (74)
29 2og0_A Excisionase; protein-DN 38.0 33 0.0011 23.0 3.5 35 9-43 5-44 (52)
30 1tsj_A Conserved hypothetical 33.3 7.9 0.00027 31.5 -0.4 15 75-89 111-125 (139)
31 1yyc_A LEA protein, putative l 32.2 67 0.0023 27.3 5.4 73 322-400 3-78 (174)
32 3oms_A PHNB protein; structura 29.1 10 0.00035 30.9 -0.4 15 75-89 120-134 (138)
33 4h08_A Putative hydrolase; GDS 23.7 2.1E+02 0.0071 23.5 7.2 45 191-237 73-118 (200)
34 1pm6_A Excisionase; antiparall 22.6 58 0.002 23.4 2.7 35 9-43 5-44 (72)
35 3l20_A Putative uncharacterize 21.4 19 0.00065 30.6 -0.1 15 75-89 148-162 (172)
36 2o7a_A Lysozyme; protein foldi 20.8 18 0.00062 29.0 -0.3 25 13-37 80-104 (124)
No 1
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ...
Probab=100.00 E-value=2.7e-83 Score=705.90 Aligned_cols=392 Identities=27% Similarity=0.485 Sum_probs=337.2
Q ss_pred CEEeeHHHHHHHHhhhCHHHHHHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeec
Q psy10965 1 FVYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQI 80 (400)
Q Consensus 1 F~~~E~~~~~~W~~~~~p~~~~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~ 80 (400)
|+|+|++||++||++++|+.+++||+||++||||++||+|||+||++++|||+||||++|++|++++|| ..|++||+|
T Consensus 126 F~~~e~~~l~~w~~e~~Pe~~~~vk~lV~~Grle~~gG~Wv~~De~~~~~EslirQl~~G~~~~~~~FG--~~~~~~W~p 203 (1045)
T 3bvx_A 126 FIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMN--VTPTASWAI 203 (1045)
T ss_dssp EEECCHHHHHHHHHHSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHC--CCCCEEEEC
T ss_pred EEEecHHHHHHHHHHCCHHHHHHHHHHHhCCCEEEECCccccccccCCCHHHHHHHHHHHHHHHHHHhC--CCCceEEcC
Confidence 899999999999999999999999999999999999999999999999999999999999999999999 889999999
Q ss_pred CCCCCCHHHHHHHHHCCCCceeeecccHHHHHHhhhCCcceEEEe----cCCCCCCCcceeeeecC-CCCC------CCC
Q psy10965 81 DPFGHSAEVALEFADMGFDGVFFGRIDHEDIALRKKNKTMEMVWR----PDDTLGPEGDFFTGVMY-NIYD------PPP 149 (400)
Q Consensus 81 D~FGhs~~lPqil~~~Gi~~~~~~R~~~~~~~~~~~~~~~~F~W~----g~dg~~~~s~v~t~~~~-~~Y~------~~~ 149 (400)
|+||||+++||||+++||++++++|++|++++.++..++++|+|+ |+|| ++||||++| .+|+ +++
T Consensus 204 D~FG~s~~lPqil~~~Gi~~~~~~R~~~~~~~~~~~~k~~eF~W~~~w~~~dG----s~Ilt~~~p~~~Y~~~~~~gp~~ 279 (1045)
T 3bvx_A 204 APFGHSPTMPYILQKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGD----TALFTHMMPFYSYDIPHTCGPDP 279 (1045)
T ss_dssp CSSSBCTHHHHHHHTTTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCT----TCEEEEECCSSCSSGGGTSSSCH
T ss_pred CCCCccHHHHHHHHHcCCCeEEEecccccccccccccCCceEEEeCCCCCCCC----CeEEEEeccccccCcccccCCCc
Confidence 999999999999999999999999999999998888889999999 7888 999999998 4675 233
Q ss_pred CCC--ccCCC--C---CCCccCC-CCccccchhhhHHHHHHHHHHHhhhcCCCceEEeeeCCCCCcchhHH---HHHHHH
Q psy10965 150 GFC--FDTYC--E---DEPIMDN-PKLHGVNVNARVDEFIEVVKKYAQAYRTNNVIITMGGDFHYVVASAW---FKNIDK 218 (400)
Q Consensus 150 ~~~--~d~~~--~---~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~il~~~G~D~~~~~a~~~---f~~~~~ 218 (400)
+|| ||+.. . ..|..++ ..+.+.|++++++.+++++++.+..|.++++|+|+|+||++.++.+| |++|++
T Consensus 280 ~~c~~fdf~~l~~~~~~~~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~t~~~l~~~G~d~~~~~~~~~~~~~~n~~~ 359 (1045)
T 3bvx_A 280 KVCCQFDFKRMGSFGLSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYER 359 (1045)
T ss_dssp HHHGGGCGGGSSTTSCCCTTSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHH
T ss_pred cccccccccccccccccCcccCCcccccHHHHHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhhhHHHHHHHHH
Confidence 444 33210 0 0111111 13456789999999999999988889999999999999999987654 899999
Q ss_pred HHHHHHccCCCCeEEEecChHHHHHHHHhcC----CCCCCccCCCcccCCCCCCCccceeeecchhhHHHHHHHHHHHHH
Q psy10965 219 LIKYVNAKLNSDVHVLYSTPACYLQALNKEN----ITWPSKMDDDFFPFGSDEHSYWTGYFTSRPSFKYFVYQTNVALQM 294 (400)
Q Consensus 219 li~~~n~~~~~~~~i~~sT~~~yf~~l~~~~----~~lpv~~~gel~~~~~~~~~yw~G~ytSr~~lK~~~r~~e~~L~~ 294 (400)
+|+++|+.++..++++|||+++||+++++.. ..||++ +|||+||.++.++||+|||||||++|+++|++|++|++
T Consensus 360 li~~in~~~~~~~~v~~sT~~~yf~~l~~~~~~~~~~lp~~-~Ge~~~~~~~~~~yw~G~yTSr~~~K~~nR~~e~~L~~ 438 (1045)
T 3bvx_A 360 LFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTL-SGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRA 438 (1045)
T ss_dssp HHHHHHHCGGGCEEEEECCHHHHHHHHHHHHHTTSCCCCEE-ESCBCSCEEETTEECCGGGTSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCCCceEEECCHHHHHHHHHhhcccccccCccc-CCcccccccCCcccccceecccHHHHHHHHHHHHHHHH
Confidence 9999998753368999999999999998753 369999 99999999888899999999999999999999999999
Q ss_pred HHHHHhhCCC--CcCh-HHHHHHHHHHHhhhcccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC----
Q psy10965 295 TKQLKTSLPN--DTLA-EEQFLIQRAMGIAQHHDAVSGTERQHVTNDYSLYLYEGIQAAMKIINVAYRHLLGDYLP---- 367 (400)
Q Consensus 295 ae~l~~l~~~--~~~~-~~l~~~w~~l~~~q~HD~ItGTs~~~V~~d~~~~l~~a~~~~~~~~~~~~~~l~~~~~~---- 367 (400)
||.|++++.+ ..|| +.|+++|+.|+++||||+|||||+++|++||..||.+|.+.++.+++.+++.|+.....
T Consensus 439 aE~l~ala~~~~~~~~~~~L~~~wk~lll~QhHD~i~Gts~~~V~~d~~~rl~~a~~~~~~l~~~al~~L~~~~~~~~~~ 518 (1045)
T 3bvx_A 439 AEMLSAWHSWDGMARIEERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSIYSPD 518 (1045)
T ss_dssp HHHHHHTSCCCGGGCHHHHHHHHHHHHHHHTBTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCTTTCCCC
T ss_pred HHHHHHHHHhcCCCccHHHHHHHHHHHhccccccCCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence 9999999986 3567 58999999999999999999999999999999999999999999999999999842110
Q ss_pred ------CCcccccccccccCCCC----CCC---eE-EEEEcCCCCC
Q psy10965 368 ------EQQPCLLMNVSQCELPS----PTI---NY-ITLYNRFRLS 399 (400)
Q Consensus 368 ------~~~~~~~~n~s~~~~~~----~~~---~~-~~v~Np~~~~ 399 (400)
+...|...+.+.||... ..+ .. ++|||||+|+
T Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vvvfN~L~~~ 564 (1045)
T 3bvx_A 519 FSFSYFTLDDSRWPGSGVEDSRTTIILGEDILPSKHVVMHNTLPHW 564 (1045)
T ss_dssp TTSCSEEEECSSSSCTTTCCCCCEECCBTTTBSEEEEEEEECSSSC
T ss_pred ccccccchhhhcccccccccccccccccccccCCceEEEEcCCCcc
Confidence 01112224455565431 122 45 9999999996
No 2
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A*
Probab=100.00 E-value=5.8e-76 Score=643.26 Aligned_cols=349 Identities=14% Similarity=0.189 Sum_probs=301.3
Q ss_pred CEEeeHHHHHHHHhhhCHHHHHHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeec
Q psy10965 1 FVYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQI 80 (400)
Q Consensus 1 F~~~E~~~~~~W~~~~~p~~~~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~ 80 (400)
|+|+|+.++.+||.+++|+.+++||+||++||||+ ||||||+|++++++||+||||++|++|+++ || ..|++||+|
T Consensus 71 F~~~~q~~~~~~~~~~~p~~~~~vk~lV~~Grlei-G~wYv~~D~~~~~~es~irq~~~G~~~~~~-fG--~~~~~~w~p 146 (923)
T 2wyh_A 71 FHLDGQTIILDDYLKVRPEREPEIRQAIASGKLRI-GPFYILQDDFLTSSESNVRNMLIGKEDCDR-WG--ASVPLGYFP 146 (923)
T ss_dssp EECTTBTHHHHHHHHHCGGGHHHHHHHHHTTSEEC-CSBSSCBCSTTSCHHHHHHHHHHHHHHHHH-HT--CCCSSEEES
T ss_pred EEEeCCHHHHHHHHHHCHHHHHHHHHHHHcCCEEE-eeeeeccccccCCHHHHHHHHHHHHHHHHH-cC--CCCceeEec
Confidence 78888887779999999999999999999999996 877799999999999999999999999988 99 889999999
Q ss_pred CCCCCCHHHHHHHHHCCCCceeeeccc----HHHH---HHhhhCCcceEEEecCCCCCCCcceeeeecCCCCCCCCCCCc
Q psy10965 81 DPFGHSAEVALEFADMGFDGVFFGRID----HEDI---ALRKKNKTMEMVWRPDDTLGPEGDFFTGVMYNIYDPPPGFCF 153 (400)
Q Consensus 81 D~FGhs~~lPqil~~~Gi~~~~~~R~~----~~~~---~~~~~~~~~~F~W~g~dg~~~~s~v~t~~~~~~Y~~~~~~~~ 153 (400)
|+||||+++||||+++||++++++|++ |+.+ ..+...++++|+|+|+|| |+||||++|.+|+++..++
T Consensus 147 D~FG~s~~lPqil~~~Gi~~~~~~R~~~~~~~n~~~~~~~~~~~~~~eF~W~g~dG----s~Ilt~~~p~~Y~~g~~~~- 221 (923)
T 2wyh_A 147 DTFGNMGQTPQLMLKAGLQAAAFGRGIRPTGFNNQVDTSEKYSSQFSEISWQGPDN----SRILGLLFANWYSNGNEIP- 221 (923)
T ss_dssp SCSSBCTTHHHHHHTTTCCEEEECSSCEECCSSSCCCTTCTTEESSSEEEEECTTC----CEEEEEECTTCTTTTCSCC-
T ss_pred CCCCcchHHHHHHHHcCCCEEEEEeccccccccccccchhhccCCCceEEEECCCC----CeEEEEECCCCccCCCCCC-
Confidence 999999999999999999999999999 7643 122346889999999999 9999999999998663321
Q ss_pred cCCCCCCCccCCCCccccchhhhHHHHHHHHHHHhhhcCCCceEEeeeCCCCCcchhHHHHHHHHHHHHHHccCCCCeEE
Q psy10965 154 DTYCEDEPIMDNPKLHGVNVNARVDEFIEVVKKYAQAYRTNNVIITMGGDFHYVVASAWFKNIDKLIKYVNAKLNSDVHV 233 (400)
Q Consensus 154 d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~il~~~G~D~~~~~a~~~f~~~~~li~~~n~~~~~~~~i 233 (400)
.+..+++.+++.+++.+++ .+.++++|+|+|+||+++. ++|+++|+++|+.. +.+++
T Consensus 222 --------------~~~~~v~~~~~~~~~~~~~---~~~t~~~l~~~G~D~~~~~-----~~~~~~i~~~n~~~-~~~~~ 278 (923)
T 2wyh_A 222 --------------TTEAEARLFWDKKLADAER---FASTKHLLMMNGCDHQPVQ-----LDVTKAIALANQLY-PDYEF 278 (923)
T ss_dssp --------------SSHHHHHHHHHHHHHHHHH---HCSSSEEEEEECCBTCCCC-----TTHHHHHHHHHHHC-TTEEE
T ss_pred --------------CCHHHHHHHHHHHHHHHHh---cCCCCeEEEEeecCCCCcc-----hhHHHHHHHHHhhC-CCceE
Confidence 1345666666666665543 5889999999999998876 78999999999964 67899
Q ss_pred EecChHHHHHHHHhc-CCCCCCccCCCcccCCCCCCCcc---ceeeecchhhHHHHHHHHHHH-HHHHHHHhhCCC--Cc
Q psy10965 234 LYSTPACYLQALNKE-NITWPSKMDDDFFPFGSDEHSYW---TGYFTSRPSFKYFVYQTNVAL-QMTKQLKTSLPN--DT 306 (400)
Q Consensus 234 ~~sT~~~yf~~l~~~-~~~lpv~~~gel~~~~~~~~~yw---~G~ytSr~~lK~~~r~~e~~L-~~ae~l~~l~~~--~~ 306 (400)
++||+++||+++++. ...||++ +|||+.+. +.+| +|||||||++|++||++|++| +.||+|+++|.+ ..
T Consensus 279 ~~sT~~~yf~~l~~~~~~~lp~~-~GEl~~~~---~~~W~th~G~~tSr~~~K~~nR~~E~~L~~~aE~l~~la~~~g~~ 354 (923)
T 2wyh_A 279 VHSCFEDYLADLADDLPENLSTV-QGEITSQE---TDGWYTLANTASARIYLKQANTRVSRQLENITEPLAAMAYEVTST 354 (923)
T ss_dssp EECCHHHHHHHHHHHSCSCCCEE-ESCBSCTT---SCSSSSCGGGGGTTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHSC
T ss_pred EECCHHHHHHHHHhhccccCcee-cccccCcc---cccceecCCEeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999875 5689999 99998543 3344 599999999999999999999 799999999865 46
Q ss_pred Ch-HHHHHHHHHHHhhhcccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcccccccccccCCCCC
Q psy10965 307 LA-EEQFLIQRAMGIAQHHDAVSGTERQHVTNDYSLYLYEGIQAAMKIINVAYRHLLGDYLPEQQPCLLMNVSQCELPSP 385 (400)
Q Consensus 307 ~~-~~l~~~w~~l~~~q~HD~ItGTs~~~V~~d~~~~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~n~s~~~~~~~ 385 (400)
|| +.|+++||.|+++||||+|||||+++|++||..++.++.+.++.+++.+++.|+.. ++.+. ..
T Consensus 355 yp~~~L~~~Wk~ll~~Q~HD~i~Gts~~~V~~d~~~~~~~~~~~~~~l~~~al~~l~~~----------~~~~~----~~ 420 (923)
T 2wyh_A 355 YPHDQLRYAWKTLMQNHPHDSICGCSVDSVHREMMTRFEKAYEVGHYLAKEAAKQIADA----------IDTRD----FP 420 (923)
T ss_dssp CCHHHHHHHHHHHHTTCBHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----------BCCTT----SC
T ss_pred CchHHHHHHHHHHhccCCCcCcCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------ccccc----CC
Confidence 88 58999999999999999999999999999999999999999999999999999863 12110 11
Q ss_pred CCeE-EEEEcCCCCC
Q psy10965 386 TINY-ITLYNRFRLS 399 (400)
Q Consensus 386 ~~~~-~~v~Np~~~~ 399 (400)
.+.+ ++|||||+|+
T Consensus 421 ~~~~~vvvfN~l~~~ 435 (923)
T 2wyh_A 421 MDSQPFVLFNTSGHS 435 (923)
T ss_dssp TTSEEEEEEECSSSC
T ss_pred CCceEEEEEcCCCce
Confidence 2344 9999999996
No 3
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}
Probab=100.00 E-value=1.5e-73 Score=620.95 Aligned_cols=351 Identities=16% Similarity=0.185 Sum_probs=272.8
Q ss_pred CEEee-HHHHHHHHhhhCHHHHHHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeee
Q psy10965 1 FVYVE-TSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQ 79 (400)
Q Consensus 1 F~~~E-~~~~~~W~~~~~p~~~~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~ 79 (400)
|+|+| +.++.+||.+++|+.+++||+||++|||| |||||||+|++++++||+||||++|++|+++ || ..|++||+
T Consensus 51 f~~~~~q~~~~~~~~~~~p~~~~~vk~lv~~Gr~e-igg~~v~~D~~~~~~es~irq~~~G~~~~~~-fG--~~~~~~w~ 126 (899)
T 3lvt_A 51 SFHLDGQTIILDDYLQVRPEKKEAVKKAVQAGKLK-IGPFYILQDDFLISSESNVRNMLIGHLESQK-WG--APVQLGYF 126 (899)
T ss_dssp CEECTTBTHHHHHHHHHCGGGHHHHHHHHHTTSEE-CCSBSSCCCGGGSCHHHHHHHHHHHHHHHHH-HT--CCCCCEEE
T ss_pred EEEEcccHHHHHHHHhhCHHHHHHHHHHHHcCCEE-ECchhccccccCCCHHHHHHHHHHHHHHHHH-cC--CCCceeEe
Confidence 67764 66788999999999999999999999999 8999999999999999999999999999988 99 89999999
Q ss_pred cCCCCCCHHHHHHHHHCCCCceeeeccc----HHHHHH--hhhCCcceEEEecCCCCCCCcceeeeecCCCCCCCCCCCc
Q psy10965 80 IDPFGHSAEVALEFADMGFDGVFFGRID----HEDIAL--RKKNKTMEMVWRPDDTLGPEGDFFTGVMYNIYDPPPGFCF 153 (400)
Q Consensus 80 ~D~FGhs~~lPqil~~~Gi~~~~~~R~~----~~~~~~--~~~~~~~~F~W~g~dg~~~~s~v~t~~~~~~Y~~~~~~~~ 153 (400)
||+||||+++||||+++||++++++|++ ++.+.. ....++++|+|+|+|| |+||||+++++|+++..+.
T Consensus 127 ~D~FG~s~~lp~i~~~~Gi~~~~~~Rg~~~~~~~~~k~~~~~~~p~~~F~W~g~dG----s~vlt~~~~~~Y~~g~~~p- 201 (899)
T 3lvt_A 127 PDTFGNMGQTPQMMQLANLPAAAFGRGVKPIGFDNQVLESDYSSQYSEMWWEGPDQ----TKIFGLLFANWYSNGNEIP- 201 (899)
T ss_dssp SCCCT---THHHHHHTTTCCEEEEC---------------------CEEEEECTTS----CEEEEEECCCC----CCSC-
T ss_pred CCCCCCchHHHHHHHHcCCCeEEEecccccccccccccccccCCCCceEEEECCCC----CeEEEEECCCcCcCccCCC-
Confidence 9999999999999999999999999986 332211 1124788999999999 9999999999998653221
Q ss_pred cCCCCCCCccCCCCccccchhhhHHHHHHHHHHHhhhcCCCceEEeeeCCCCCcchhHHHHHHHHHHHHHHccCCCCeEE
Q psy10965 154 DTYCEDEPIMDNPKLHGVNVNARVDEFIEVVKKYAQAYRTNNVIITMGGDFHYVVASAWFKNIDKLIKYVNAKLNSDVHV 233 (400)
Q Consensus 154 d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~il~~~G~D~~~~~a~~~f~~~~~li~~~n~~~~~~~~i 233 (400)
.+..+++.+++.+++.++ ..+.++++|+|+|+|+++.. ++|+++++++|+.. +.+++
T Consensus 202 --------------~~~~~~~~~~~~~~~~~~---~~~~t~~il~~~G~D~~p~~-----~~l~~~i~~~n~~~-p~~~~ 258 (899)
T 3lvt_A 202 --------------SEKEAAIAFWKQKLADVE---RYASTNHLLMMNGVDHQPVQ-----RDITKAIALANELF-PEYEF 258 (899)
T ss_dssp --------------SSHHHHHHHHHHHHHHHH---HHCSSSEEEEEEEEC-----------CHHHHHHHHHHHC-SSEEE
T ss_pred --------------CcHHHHHHHHHHHHHHHH---hhcCCCeEEEeecCCCCchH-----HHHHHHHHHHHhcC-CCceE
Confidence 123455555555555443 35789999999999986544 79999999999875 68999
Q ss_pred EecChHHHHHHHHhcC-CCCCCccCCCcccCCCCCCCccc-eeeecchhhHHHHHHHHHHHH-HHHHHHhhCCC--CcCh
Q psy10965 234 LYSTPACYLQALNKEN-ITWPSKMDDDFFPFGSDEHSYWT-GYFTSRPSFKYFVYQTNVALQ-MTKQLKTSLPN--DTLA 308 (400)
Q Consensus 234 ~~sT~~~yf~~l~~~~-~~lpv~~~gel~~~~~~~~~yw~-G~ytSr~~lK~~~r~~e~~L~-~ae~l~~l~~~--~~~~ 308 (400)
++||+++||+++++.. .+||++ +|||++...+ .-||+ |+||||+++|++||++|++|+ .||.|++++.+ ..||
T Consensus 259 ~~st~~~yf~~l~~~~~~~lp~~-~GEl~~~~~~-G~yt~~~~~sSr~~~K~~nR~~E~~L~~~aE~l~~la~~~g~~yp 336 (899)
T 3lvt_A 259 IHSNFDDYLKAVQEELPEDLGTV-TGELTSQETD-GWYTLANTSSARVYLKQWNTKVQRQLENIAEPLAAMAYEVTGDYP 336 (899)
T ss_dssp EECCHHHHHHHHHHTCC--CCEE-ECCC------------CGGGGBTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCCC
T ss_pred EEcCHHHHHHHHHHhccccCCcc-cccccccccC-ceEEECCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 9999999999999876 689999 9999853211 01332 445689999999999999998 69999999865 5788
Q ss_pred -HHHHHHHHHHHhhhcccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcccccccccccCCCCCCC
Q psy10965 309 -EEQFLIQRAMGIAQHHDAVSGTERQHVTNDYSLYLYEGIQAAMKIINVAYRHLLGDYLPEQQPCLLMNVSQCELPSPTI 387 (400)
Q Consensus 309 -~~l~~~w~~l~~~q~HD~ItGTs~~~V~~d~~~~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~n~s~~~~~~~~~ 387 (400)
+.|+++||.|+++||||+|||||+++|++|+..+|.++.+.++++++.+++.|+.. ++. |..+ .+
T Consensus 337 ~~~l~~~Wk~ll~~Q~HD~i~Gtsi~~V~~d~~~~~~~~~~~~~~l~~~al~~l~~~----------~~~--~~~~--~~ 402 (899)
T 3lvt_A 337 HDQFDYAWKTLLQNHPHDSICGCSVDEVHRGMMTRFENANDVGHFLADEATRQLTEA----------IDT--SVFP--EK 402 (899)
T ss_dssp HHHHHHHHHHHHTTCSTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----------BCC--TTSC--TT
T ss_pred HHHHHHHHHHHhccCCCCccCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------ccc--ccCC--CC
Confidence 58999999999999999999999999999999999999999999999999999863 121 1111 13
Q ss_pred eE-EEEEcCCCCC
Q psy10965 388 NY-ITLYNRFRLS 399 (400)
Q Consensus 388 ~~-~~v~Np~~~~ 399 (400)
+. ++|||||+|+
T Consensus 403 ~~~v~vfN~l~~~ 415 (899)
T 3lvt_A 403 AHPFVLFNTSGYQ 415 (899)
T ss_dssp CEEEEEEECSSSC
T ss_pred CCEEEEEeCCCce
Confidence 44 9999999996
No 4
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1
Probab=100.00 E-value=5.5e-61 Score=459.36 Aligned_cols=223 Identities=52% Similarity=1.013 Sum_probs=211.6
Q ss_pred CEEeeHHHHHHHHhhhCHHHHHHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeec
Q psy10965 1 FVYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQI 80 (400)
Q Consensus 1 F~~~E~~~~~~W~~~~~p~~~~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~ 80 (400)
|+|+|+++|++||++++|+.+++||+||++||||+|||||||+|++++++||+||||++|++|++++||.+.+|++||+|
T Consensus 67 F~~~e~~~~~~w~~~~~Pe~~~~vk~lV~~Grle~vgG~wve~D~~~~~~eslirQl~~G~~~~~~~fG~~~~~~~~W~p 146 (298)
T 1o7d_A 67 FIYVEIAFFSRWWRQQTNATQKIVRELVRQGRLEFANGGWVMNDEATTHYGAIIDQMTLGLRFLEETFGSDGRPRVAWHI 146 (298)
T ss_dssp EEECCHHHHHHHHHTSCHHHHHHHHHHHHTTSEEESSCSSSCBCSSSCCHHHHHHHHHHHHHHHHHHHGGGGCCSEEEES
T ss_pred EEEecchHhHHHHHhcCHHHHHHHHHHHHCCCEEEECceeeccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCceeEeC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999932249999999
Q ss_pred CCCCCCHHHHHHHHHCCCCceeeecccHHHHHHhhhCCcceEEEecC-----CCCCCCcceeeeecCCCCCCCCCCCccC
Q psy10965 81 DPFGHSAEVALEFADMGFDGVFFGRIDHEDIALRKKNKTMEMVWRPD-----DTLGPEGDFFTGVMYNIYDPPPGFCFDT 155 (400)
Q Consensus 81 D~FGhs~~lPqil~~~Gi~~~~~~R~~~~~~~~~~~~~~~~F~W~g~-----dg~~~~s~v~t~~~~~~Y~~~~~~~~d~ 155 (400)
|+||||+++||||+++||++++++|+++++++.+...+.++|+|+|+ || |+||||+++.+|+++.++|||.
T Consensus 147 D~FG~s~~lP~il~~~Gi~~~~~~R~~~~~~~~~~~~~~~eF~W~g~~~~~~dg----s~i~t~~~~~~Y~~~~g~~fd~ 222 (298)
T 1o7d_A 147 DPFGHSREQASLFAQMGFDGFFFGRLDYQDKKVRKKTLQMEQVWRASTSLKPPT----ADLFTSVLPNMYNPPEGLCWDM 222 (298)
T ss_dssp SSSSCCHHHHHHHHHHTCCEEEESCCCHHHHHHHHHTTCSEEEEECCSSSCTTT----TEEEEEECSSTTSCCTTCCCST
T ss_pred CCCCccHHHHHHHHHcCCCeEEEEecccccccccccCCCceEEEECCCCCCCCC----CeEEEEEeCCCCCCCCCccccc
Confidence 99999999999999999999999999999998776678889999999 67 9999999999999999999999
Q ss_pred CCCCCCccCCCCccccchhhhHHHHHHHHHHHhhhcCCCceEEeeeCCCCCcchhHHHHHHHHHHHHHHccC
Q psy10965 156 YCEDEPIMDNPKLHGVNVNARVDEFIEVVKKYAQAYRTNNVIITMGGDFHYVVASAWFKNIDKLIKYVNAKL 227 (400)
Q Consensus 156 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~il~~~G~D~~~~~a~~~f~~~~~li~~~n~~~ 227 (400)
.|.+.|+++++.+.++|++++++.|+++++++++.|+|++||+|+|+||++++|.+||.+|+++|+++|+++
T Consensus 223 ~~~~~p~~~~~~~~~~nv~~r~~~~~~~~~~~a~~~~t~~vl~p~G~Df~~~~a~~~f~n~~~li~~iN~~~ 294 (298)
T 1o7d_A 223 LCADKPVVEDTRSPEYNAKELVRYFLKLATDQGKLYRTKHTVMTMGSDFQYENANTWFKNLDKLIQLVNAQQ 294 (298)
T ss_dssp TCCCCCCCCCTTSTTCCHHHHHHHHHHHHHHHHTTSSSSEEEEEECCBTCCTTHHHHHHHHHHHHHHHHC--
T ss_pred ccCCcCccCCccchHHHHHHHHHHHHHHHHHHHhhcCCCcEEeccCCCCCccchhHHHHHHHHHHHHHhhcC
Confidence 999999888877889999999999999999999999999999999999999999999999999999999975
No 5
>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1
Probab=99.87 E-value=1.7e-22 Score=154.93 Aligned_cols=74 Identities=47% Similarity=0.877 Sum_probs=71.4
Q ss_pred CeEEEecChHHHHHHHHhcCCCCCCccCCCcccCCCCCCCccceeeecchhhHHHHHHHHHHHHHHHHHHhhCCC
Q psy10965 230 DVHVLYSTPACYLQALNKENITWPSKMDDDFFPFGSDEHSYWTGYFTSRPSFKYFVYQTNVALQMTKQLKTSLPN 304 (400)
Q Consensus 230 ~~~i~~sT~~~yf~~l~~~~~~lpv~~~gel~~~~~~~~~yw~G~ytSr~~lK~~~r~~e~~L~~ae~l~~l~~~ 304 (400)
.++++||||++||+++++.+..||+. .||||||+++.++||+|||||||.+|+++|++|++|++||.|.+++..
T Consensus 2 ~v~v~ysT~s~Yf~al~~~~~~~p~~-~~DFfpYad~~~~yWtGyyTSRp~lK~~~R~~~~~L~~ae~L~~la~~ 75 (84)
T 1o7d_B 2 RVNVLYSTPACYLWELNKANLSWSVK-KDDFFPYADGPYMFWTGYFSSRPALKRYERLSYNFLQVCNQLEALAGP 75 (84)
T ss_dssp CEEEEECCHHHHHHHHHHTCCCBCEE-CSCCCSCCSBTTBCSCGGGTSCHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred eEEEEeCCHHHHHHHHHHhCCCCccc-CCCcccccCCCCCcceeeeeCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 57999999999999999988899999 999999999999999999999999999999999999999999999876
No 6
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6
Probab=99.80 E-value=3.5e-20 Score=161.77 Aligned_cols=89 Identities=36% Similarity=0.553 Sum_probs=79.4
Q ss_pred HHHHHHHHHHhhhcccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcccccccccccCCCCCCCeE
Q psy10965 310 EQFLIQRAMGIAQHHDAVSGTERQHVTNDYSLYLYEGIQAAMKIINVAYRHLLGDYLPEQQPCLLMNVSQCELPSPTINY 389 (400)
Q Consensus 310 ~l~~~w~~l~~~q~HD~ItGTs~~~V~~d~~~~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~n~s~~~~~~~~~~~ 389 (400)
.|+++||.|+++||||+||||++++|++||..||.++++.++.+++.+++.|+.. +.++..|..+|++.||....++.+
T Consensus 2 ~L~~~~k~l~~~QhHDaItGts~~~V~~Dy~~rl~~~~~~~~~l~~~~l~~L~~~-~~~~~~~~~ln~~~~~~~~~~~~~ 80 (159)
T 1o7d_C 2 DSAPLNEAMAVLQHHDAVSGTSRQHVANDYARQLSEGWRPCEVLMSNALAHLSGL-KEDFAFCRKLNISICPLTQTAERF 80 (159)
T ss_dssp CSHHHHHHHHHTTBTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CSCEECCTTGGGTCCHHHHHCSEE
T ss_pred hHHHHHHHHhCcccCCcCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccccccccccccccCccccCCccE
Confidence 3678999999999999999999999999999999999999999999999999863 346778999999999865444556
Q ss_pred -EEEEcCCCCC
Q psy10965 390 -ITLYNRFRLS 399 (400)
Q Consensus 390 -~~v~Np~~~~ 399 (400)
++|||||+|+
T Consensus 81 ~vvvfN~l~~~ 91 (159)
T 1o7d_C 81 QVIVYNPLGRK 91 (159)
T ss_dssp EEEEEECSSSC
T ss_pred EEEEECCCCce
Confidence 9999999996
No 7
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=99.68 E-value=1.7e-15 Score=159.00 Aligned_cols=97 Identities=16% Similarity=0.306 Sum_probs=93.1
Q ss_pred HHHHHHHHhhhCHHHHHHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeecCCCCC
Q psy10965 6 TSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGH 85 (400)
Q Consensus 6 ~~~~~~W~~~~~p~~~~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~D~FGh 85 (400)
.+.+..|+++.+|+..++||+++++|++|++|++|++++.+++++|++++|+..|+++++ .|| .+|+..|+||+ ++
T Consensus 51 s~~ll~~l~~~~p~l~~~ik~l~~~G~vE~l~~~~~Hpi~~l~p~e~~~~QI~~g~~~~~-~FG--~~P~G~WlPE~-~y 126 (659)
T 1k1x_A 51 SGPLLEWIEENKPDYLDLLRSLIKRGQLEIVVAGFYEPVLAAIPKEDRLVQIEMLKDYAR-KLG--YDAKGVWLTER-VW 126 (659)
T ss_dssp CHHHHHHHHHHCHHHHHHHHHHHHTTCEEEEBCCTTCCCGGGSCHHHHHHHHHHHHHHHH-HTT--CCCCEEECGGG-CB
T ss_pred cHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEccCcccccccCCCHHHHHHHHHHHHHHHH-HcC--CCCCEEECccc-cc
Confidence 577889999999999999999999999999999999999999999999999999999998 999 99999999999 69
Q ss_pred CHHHHHHHHHCCCCceeeecc
Q psy10965 86 SAEVALEFADMGFDGVFFGRI 106 (400)
Q Consensus 86 s~~lPqil~~~Gi~~~~~~R~ 106 (400)
++++|+||+++||+++++..-
T Consensus 127 s~~l~~iL~~~Gi~y~~td~~ 147 (659)
T 1k1x_A 127 QPELVKSLREAGIEYVVVDDY 147 (659)
T ss_dssp CTTHHHHHHHTTCCEEEEEHH
T ss_pred ChhHHHHHHHcCCcEEEECch
Confidence 999999999999999998854
No 8
>3p0b_A TT1467 protein; glycoside hydrolase GH57, glycogen branching, transferase; 1.35A {Thermus thermophilus} PDB: 1ufa_A
Probab=99.05 E-value=4e-09 Score=106.89 Aligned_cols=88 Identities=14% Similarity=0.184 Sum_probs=83.2
Q ss_pred hhhCHHHHHHHHHHHHcCceEEEcceeeecCCCCC-CHHHHHHHHHHHHHHHHHhcCCCCCcceeeecCCCCCCH-----
Q psy10965 14 EEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATP-HYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGHSA----- 87 (400)
Q Consensus 14 ~~~~p~~~~~vk~lV~~Grle~vgg~~v~~De~l~-~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~D~FGhs~----- 87 (400)
+...++....+|+|++.|++|+++++|+.+-..+. ..|++..|+..|.+.+++.|| .+|+..|+|.+ +++.
T Consensus 138 ~~~~~dii~~fr~L~~~G~iEiit~~~tH~~lPLl~~~e~~~~QI~~g~~~~~~~FG--~~P~G~WlpE~-ay~~~~~~~ 214 (540)
T 3p0b_A 138 QRLSGDLVAAFRKAEEGGQVELITSNATHGYSPLLGYDEALWAQIKTGVSTYRRHFA--KDPTGFWLPEM-AYRPKGPWK 214 (540)
T ss_dssp HHTTTCHHHHHHHHHHHTSEEEEEECTTCBCGGGCSCHHHHHHHHHHHHHHHHHHHS--SCCCBEECGGG-CBCCSEEEC
T ss_pred HHhhHHHHHHHHHHHHCCCEEEEcCCchhhHHhcCCCHHHHHHHHHHHHHHHHHHhC--CCCCEEECccc-ceeCccccc
Confidence 45688999999999999999999999999999998 589999999999999999999 89999999999 9998
Q ss_pred ------------HHHHHHHHCCCCceeee
Q psy10965 88 ------------EVALEFADMGFDGVFFG 104 (400)
Q Consensus 88 ------------~lPqil~~~Gi~~~~~~ 104 (400)
.+..+|+++||+++++.
T Consensus 215 ~~~~~~~~~~~~~l~~~L~~~Gi~y~~vd 243 (540)
T 3p0b_A 215 PPVEGPPEGVRPGVDELLMRAGIRYTFVD 243 (540)
T ss_dssp CSSSCSCCEEECCHHHHHHHTTCCEEEEC
T ss_pred cccccccccchhhHHHHHHHcCCeEEEEC
Confidence 99999999999999975
No 9
>2b5d_X Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2.20A {Thermotoga maritima} SCOP: a.8.3.3 c.6.2.4
Probab=98.72 E-value=1.6e-06 Score=88.80 Aligned_cols=87 Identities=17% Similarity=0.229 Sum_probs=79.2
Q ss_pred hCHHHHHHHHHHHHcCceEEEcceeeecCCCCCC--HHHHHHHHHHHHHHHHHhcCCCCCcceeeecCCCCCCHHHHHHH
Q psy10965 16 QNEQVRASVKELVDQGRLEFLLGGWCMSDEATPH--YSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGHSAEVALEF 93 (400)
Q Consensus 16 ~~p~~~~~vk~lV~~Grle~vgg~~v~~De~l~~--~Eslirql~~G~~~~~~~fG~~~~~~v~w~~D~FGhs~~lPqil 93 (400)
..++....+|+|++.|++|++++.|..+=..+.. .|+...|+..|.+.+++.|| .+|+..|+|-+ +.+..+..+|
T Consensus 120 ~~~~li~~~r~L~~~G~vEll~~~y~H~ilPLl~d~~ed~~~QI~~g~~~~~~~FG--~~P~G~WlpE~-a~~~~l~~~l 196 (528)
T 2b5d_X 120 YDGNILEGFKKYQETGKLEIVTCNATHAFLPLYQMYPEVVNAQITVGVKNYEKHMK--KHPRGIWLAEC-GYYQGLDLYL 196 (528)
T ss_dssp TTTCTHHHHHHHHHHTSEEEEEECTTCBCGGGGTTCHHHHHHHHHHHHHHHHHHHS--SCCSEEECGGG-CBCTTHHHHH
T ss_pred HhHHHHHHHHHHHHCCCEEEEcCchhhHHHHhcCCCHHHHHHHHHHHHHHHHHHhC--CCCCEEECchh-ccChhHHHHH
Confidence 4555668899999999999999999988876666 79999999999999999999 89999999988 9999999999
Q ss_pred HHCCCCceeeec
Q psy10965 94 ADMGFDGVFFGR 105 (400)
Q Consensus 94 ~~~Gi~~~~~~R 105 (400)
+++||+++++.=
T Consensus 197 ~~~Gi~y~i~d~ 208 (528)
T 2b5d_X 197 AQNNVEYFFVDS 208 (528)
T ss_dssp HHTTCCEEEECT
T ss_pred HHcCCeEEEECc
Confidence 999999999864
No 10
>3n98_A Alpha-amylase, GH57 family; GH57 family member, branching enzyme, transferase; HET: BGC PG4; 1.87A {Thermococcus kodakarensis} PDB: 3n92_A* 3n8t_A*
Probab=98.52 E-value=1.1e-07 Score=96.81 Aligned_cols=88 Identities=17% Similarity=0.258 Sum_probs=83.2
Q ss_pred hhhCHHHHHHHHHHHHcCceEEEcceeeecCCCCCC-HHHHHHHHHHHHHHHHHhcCCCCCcceeeecCCCCCCH-----
Q psy10965 14 EEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPH-YSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGHSA----- 87 (400)
Q Consensus 14 ~~~~p~~~~~vk~lV~~Grle~vgg~~v~~De~l~~-~Eslirql~~G~~~~~~~fG~~~~~~v~w~~D~FGhs~----- 87 (400)
+...++...++|+|++.|++|+++++|+.+-..+.. .|++..|+..|.+.+++.|| .+|+..|+|.+ +++.
T Consensus 117 ~~~~~dii~~fr~L~~~G~iElit~~~tH~~lPLl~~~e~~~~QI~~g~~~~~~~FG--~~P~G~WlpE~-ay~~~~~~~ 193 (562)
T 3n98_A 117 KAINGDIIGKLRELQDQGYVEVITSAATHGYLPLLGRDEAIRAQIANGVATYEKHFG--MKPKGIWLPEC-AYRPAGEWE 193 (562)
T ss_dssp HHTTTCHHHHHHHHHHTTSEEEEEECTTCBCGGGCSCHHHHHHHHHHHHHHHHHHHS--SCCSBEECGGG-CBCCSEEEE
T ss_pred HHhhhHHHHHHHHHHHCCCEEEEcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcC--CCCCEEECccc-ceeCccccc
Confidence 456889999999999999999999999999998886 89999999999999999999 89999999999 9998
Q ss_pred ----------HHHHHHHHCCCCceeee
Q psy10965 88 ----------EVALEFADMGFDGVFFG 104 (400)
Q Consensus 88 ----------~lPqil~~~Gi~~~~~~ 104 (400)
.+..+|+++||+++++.
T Consensus 194 ~~~~~~~~~~~i~~~L~~~Gi~y~~vd 220 (562)
T 3n98_A 194 LPGGRKVKRQGIEKFLEEFGLRYFFVE 220 (562)
T ss_dssp CGGGCEEEECCHHHHHHTTTCCEEEEC
T ss_pred cccccccchhhHHHHHHHcCCeEEEEC
Confidence 99999999999999974
No 11
>3rxz_A Polysaccharide deacetylase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, carbohydrate esterase family 4; 2.01A {Mycobacterium smegmatis}
Probab=96.25 E-value=0.12 Score=48.46 Aligned_cols=204 Identities=10% Similarity=0.065 Sum_probs=116.5
Q ss_pred HHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeecCCCCCCHHHHHHHHHCCCCce
Q psy10965 22 ASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGHSAEVALEFADMGFDGV 101 (400)
Q Consensus 22 ~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~D~FGhs~~lPqil~~~Gi~~~ 101 (400)
+.+|+++++| .||-+-+|.-.+....+.+.+.++|..+.+.+++.+| ..| .+|-+=-.-++..+.+++++.||.+.
T Consensus 92 ~~v~~~~~~G-hEIg~H~~~H~~~~~~s~~~~~~ei~~~~~~l~~~~G--~~p-~~fr~P~g~~~~~~~~~l~e~G~~yd 167 (300)
T 3rxz_A 92 EPIRSIARAG-HEIAHHGYLHESLVGADEDTERKILTRGIEALEEVAG--VHP-VGYRAPMWEMNWHTPKLLAEFGFLYD 167 (300)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCCTTCCHHHHHHHHHHHHHHHHHHHS--CCC-CEECCGGGCCCTTHHHHHHHTTCSEE
T ss_pred HHHHHHHHcC-CEEEecCCCCcccccCCHHHHHHHHHHHHHHHHHHhC--CCC-cEEECCCCCCCHHHHHHHHHcCCEEE
Confidence 6788999999 7899999998888888999999999999999988899 544 34554333467889999999999987
Q ss_pred eeecccHHHHHHhhhCCcceEEEecCCCCCCCcceeeeecCCCCC-CCC-CCCccCCCCCCCccCCCCccccchhhhHHH
Q psy10965 102 FFGRIDHEDIALRKKNKTMEMVWRPDDTLGPEGDFFTGVMYNIYD-PPP-GFCFDTYCEDEPIMDNPKLHGVNVNARVDE 179 (400)
Q Consensus 102 ~~~R~~~~~~~~~~~~~~~~F~W~g~dg~~~~s~v~t~~~~~~Y~-~~~-~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~ 179 (400)
.-.+... ..| |-..++ ..++. +|.++. ... .+. +. |...+.. ...+.++..+.
T Consensus 168 ss~~~~~-----------~Py-~~~~~~----~~l~~--iP~~~~~~D~~~~~----~~--~~~~~~~-~~~~~~~~~~~ 222 (300)
T 3rxz_A 168 STLMDSD-----------HPY-ELAVGD----GSLVE--LPVSWALDDWQQYC----FV--PDFSGTG-LIETPAKAIEL 222 (300)
T ss_dssp CCCCSCS-----------SCE-EBCCTT----SCCEE--CCCCGGGBSHHHHC----CB--TTTBCSS-CCCCHHHHHHH
T ss_pred eeccCCC-----------Cce-EeecCC----CCeEE--EeeeeecCCcHhhh----cc--cccccCC-CCCCHHHHHHH
Confidence 6555532 112 111111 11211 221110 000 000 00 0000000 00111222233
Q ss_pred HHHHHHHHhhhcCCCceEEeeeCCCCCcchhHHHHHHHHHHHHHHccCCCCeEEEecChHHHHHHHHhcC-CCCCCccCC
Q psy10965 180 FIEVVKKYAQAYRTNNVIITMGGDFHYVVASAWFKNIDKLIKYVNAKLNSDVHVLYSTPACYLQALNKEN-ITWPSKMDD 258 (400)
Q Consensus 180 ~~~~~~~~~~~~~t~~il~~~G~D~~~~~a~~~f~~~~~li~~~n~~~~~~~~i~~sT~~~yf~~l~~~~-~~lpv~~~g 258 (400)
+.+.++.. |..+. ++.++-..........+..++++++++.+++ .+.+.|.++..+..+... ...|+. .|
T Consensus 223 ~~~~fd~~---~~~g~-~~~i~~H~~~~g~p~~~~~l~~~l~~~~~~~----~V~~~t~~eia~~~~~~~~~~~~v~-~~ 293 (300)
T 3rxz_A 223 WRAELNAM---RDIGG-AWVLTNHPFLSGRPGRAAALREFIAEVCAMD----DVWVAGMSQIAEHVRAQKLTPRTLT-RP 293 (300)
T ss_dssp HHHHHHHH---HHHTC-EEEEEECHHHHTSHHHHHHHHHHHHHHHTCT----TEEECCHHHHHHHHHHTCCCCBCCC-CC
T ss_pred HHHHHHHH---HHcCC-eEEEEEChhhcCCHHHHHHHHHHHHHHHhCC----CEEEEcHHHHHHHHHhhcCCCcccc-Cc
Confidence 33333221 21222 3333322111111233578999999998864 478999999988877643 355677 88
Q ss_pred CcccC
Q psy10965 259 DFFPF 263 (400)
Q Consensus 259 el~~~ 263 (400)
|+.|.
T Consensus 294 ~~~~~ 298 (300)
T 3rxz_A 294 ELTPV 298 (300)
T ss_dssp CCC--
T ss_pred ccccC
Confidence 88763
No 12
>3s6o_A Polysaccharide deacetylase family protein; ssgcid, NIH, structural genomics, seattle structural genomic for infectious disease; 1.85A {Burkholderia pseudomallei} SCOP: c.6.2.6
Probab=95.30 E-value=1.5 Score=41.54 Aligned_cols=80 Identities=20% Similarity=0.228 Sum_probs=66.8
Q ss_pred HHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeecCCCCCCHHHHHHHHHCC-CCc
Q psy10965 22 ASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGHSAEVALEFADMG-FDG 100 (400)
Q Consensus 22 ~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~D~FGhs~~lPqil~~~G-i~~ 100 (400)
+.+|+++++| .||-+-+|.-.+-...+.+.+.++|..+.+.+++..| ..| .+|. .-.++..+.+++++.| |.+
T Consensus 116 ~~v~~i~~~G-hEIg~H~~~H~~~~~ls~~~~~~ei~~~~~~l~~~~G--~~p-~g~r--~g~~s~~t~~ll~e~G~f~Y 189 (321)
T 3s6o_A 116 ELARAFVELG-HEIACHGWRWIHYQDMTPEREAEHMRLGMEAIERVTG--VRP-LGWY--TGRDSPNTHRLVAEYGGFLY 189 (321)
T ss_dssp HHHHHHHHTT-CEEEECCSSCSCCTTCCHHHHHHHHHHHHHHHHHHHS--CCC-CEEC--CSSCCTTHHHHHHHHCCCSE
T ss_pred HHHHHHHHcC-CEEeeCCccccccccCCHHHHHHHHHHHHHHHHHHhC--CCc-ccEE--CCCCCHHHHHHHHHcCCeEE
Confidence 5788899999 7899999998888888999999999999999988889 554 4566 3357889999999999 988
Q ss_pred eeeeccc
Q psy10965 101 VFFGRID 107 (400)
Q Consensus 101 ~~~~R~~ 107 (400)
-.-++..
T Consensus 190 dss~~~d 196 (321)
T 3s6o_A 190 DSDHYGD 196 (321)
T ss_dssp ECCCCSC
T ss_pred EEeccCC
Confidence 7765543
No 13
>3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A
Probab=94.19 E-value=1.5 Score=41.05 Aligned_cols=79 Identities=15% Similarity=0.144 Sum_probs=65.5
Q ss_pred HHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeecCCCCCCHHHHHHHHHCC-CCc
Q psy10965 22 ASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGHSAEVALEFADMG-FDG 100 (400)
Q Consensus 22 ~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~D~FGhs~~lPqil~~~G-i~~ 100 (400)
+.+|+++++| .||-+-+|.-.+-...+.+.+.++|..+.+.+++.+| ..|+ +|.+ + .++..+..++++.| |.+
T Consensus 111 ~~v~~i~~~G-heIg~Ht~~H~~~~~~s~~~~~~ei~~~~~~l~~~~G--~~p~-g~r~-~-~~~~~~~~~l~~~G~~~y 184 (308)
T 3cl6_A 111 DVIRAMVAAG-HEICSHGYRWIDYQYMDEAQEREHMLEAIRILTELTG--ERPL-GWYT-G-RTGPNTRRLVMEEGGFLY 184 (308)
T ss_dssp HHHHHHHHTT-CEEEECCSSSSCCTTCCHHHHHHHHHHHHHHHHHHHS--SCCS-EECC-S-SCCTTHHHHHHHHCCCSE
T ss_pred HHHHHHHHcC-CEEEeCCCCCcccccCCHHHHHHHHHHHHHHHHHHhC--CCcc-eEEC-C-CCCHHHHHHHHHCCCceE
Confidence 5788999999 7899999998887778999999999999999988899 5554 5765 2 56888999999999 887
Q ss_pred eeeecc
Q psy10965 101 VFFGRI 106 (400)
Q Consensus 101 ~~~~R~ 106 (400)
..-.+.
T Consensus 185 ~ss~~~ 190 (308)
T 3cl6_A 185 DCDTYD 190 (308)
T ss_dssp ECCCCC
T ss_pred EeccCC
Confidence 665543
No 14
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=89.79 E-value=0.67 Score=42.34 Aligned_cols=75 Identities=15% Similarity=0.126 Sum_probs=62.9
Q ss_pred HHHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeecCCCC-CCHHHHHHHHHCCCC
Q psy10965 21 RASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFG-HSAEVALEFADMGFD 99 (400)
Q Consensus 21 ~~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~D~FG-hs~~lPqil~~~Gi~ 99 (400)
.+.+|+++++| .|+-+-+|.-++....+.+.+.+++..+.+.+++..| ..| -+..=|+| ++..+.+++++.|+.
T Consensus 88 p~~lr~i~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G--~~~--~~fr~P~G~~~~~~~~~l~~~G~~ 162 (254)
T 2iw0_A 88 PDTIRRMRADG-HLVGSHTYAHPDLNTLSSADRISQMRQLEEATRRIDG--FAP--KYMRAPYLSCDAGCQGDLGGLGYH 162 (254)
T ss_dssp HHHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHS--CEE--SEECCGGGCCCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHCC-CEEEeeccCCCCcccCCHHHHHHHHHHHHHHHHHHhC--CCC--CEEECCCCCCCHHHHHHHHHcCCe
Confidence 37899999999 7899999998887778899999999999999988889 543 35556776 567788899999997
Q ss_pred c
Q psy10965 100 G 100 (400)
Q Consensus 100 ~ 100 (400)
.
T Consensus 163 ~ 163 (254)
T 2iw0_A 163 I 163 (254)
T ss_dssp E
T ss_pred E
Confidence 4
No 15
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=89.27 E-value=0.88 Score=39.59 Aligned_cols=74 Identities=16% Similarity=0.229 Sum_probs=61.3
Q ss_pred HHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeecCCCCC-CHHHHHHHHHCCCCc
Q psy10965 22 ASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGH-SAEVALEFADMGFDG 100 (400)
Q Consensus 22 ~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~D~FGh-s~~lPqil~~~Gi~~ 100 (400)
+.+|+++++| .|+-+-+|.-++....+.+.+.+++....+.+++..| ..|+ +..=|+|. +..+.+++++.|+..
T Consensus 47 ~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G--~~~~--~fr~P~G~~~~~~~~~~~~~G~~~ 121 (195)
T 2cc0_A 47 SLVRAQVDAG-MWVANHSYTHPHMTQLGQAQMDSEISRTQQAIAGAGG--GTPK--LFRPPYGETNATLRSVEAKYGLTE 121 (195)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHTTS--CCCS--EECCGGGCCCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHCC-CEEEcCCCCccccccCCHHHHHHHHHHHHHHHHHHhC--CCCC--EEECCCCCcCHHHHHHHHHCCCeE
Confidence 5789999999 7899999998887778899999999999999988888 5443 45557774 567888999999864
No 16
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=89.23 E-value=5.2 Score=35.26 Aligned_cols=61 Identities=16% Similarity=0.219 Sum_probs=50.8
Q ss_pred HHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeecCCCCCCH
Q psy10965 22 ASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGHSA 87 (400)
Q Consensus 22 ~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~D~FGhs~ 87 (400)
+.+|+++++| .|+-+-+|.-++....+.+.+.+++..+.+.+++..| ..|+ +..=|+|...
T Consensus 49 ~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G--~~~~--~fr~P~G~~~ 109 (216)
T 2c71_A 49 AIIRRMVNSG-HEIGNHSWSYSGMANMSPDQIRKSIADTNAVIQKYAG--TTPK--FFRPPNLETS 109 (216)
T ss_dssp HHHHHHHHTT-CEEEECCSSSSCCTTCCHHHHHHHHHHHHHHHHHHHS--CCCS--EECCGGGCCC
T ss_pred HHHHHHHHCC-CEEeeCCcCCcchhhCCHHHHHHHHHHHHHHHHHhhC--CCCe--EEECCCCCCC
Confidence 4899999999 7899999998887778899999999999999988889 5443 4556777543
No 17
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=88.98 E-value=0.72 Score=41.72 Aligned_cols=76 Identities=20% Similarity=0.187 Sum_probs=62.6
Q ss_pred HHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeecCCCC-CCHHHHHHHHHCCCCc
Q psy10965 22 ASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFG-HSAEVALEFADMGFDG 100 (400)
Q Consensus 22 ~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~D~FG-hs~~lPqil~~~Gi~~ 100 (400)
+.+|+++++| .|+-+-+|.-++....+.+.+.+++..+.+.+++..| .. .+-+..=|+| ++..+.+++++.|+..
T Consensus 86 ~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G--~~-~~~~fr~P~G~~~~~~~~~l~~~G~~~ 161 (240)
T 1ny1_A 86 QLIKRMSDEG-HIIGNHSFHHPDLTTKTADQIQDELDSVNEEVYKITG--KQ-DNLYLRPPRGVFSEYVLKETKRLGYQT 161 (240)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHS--CC-CCCEECCGGGEECHHHHHHHHHTTCEE
T ss_pred HHHHHHHHCc-CChhcCCccccccccCCHHHHHHHHHHHHHHHHHHhC--CC-CCcEEeCCCCCCCHHHHHHHHHcCCEE
Confidence 5789999999 7899999998887778899999999999999988889 53 1335556777 5678889999999875
Q ss_pred e
Q psy10965 101 V 101 (400)
Q Consensus 101 ~ 101 (400)
+
T Consensus 162 v 162 (240)
T 1ny1_A 162 V 162 (240)
T ss_dssp B
T ss_pred E
Confidence 3
No 18
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=88.81 E-value=0.89 Score=40.89 Aligned_cols=75 Identities=15% Similarity=0.209 Sum_probs=62.3
Q ss_pred HHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeecCCCC-CCHHHHHHHHHCCCCc
Q psy10965 22 ASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFG-HSAEVALEFADMGFDG 100 (400)
Q Consensus 22 ~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~D~FG-hs~~lPqil~~~Gi~~ 100 (400)
+.+|+++++| .|+-+-+|.-++....+.+.+.+++..+.+.+++..| ..|+ +..=|+| ++..+.+++++.|+..
T Consensus 75 ~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G--~~~~--~fr~P~G~~~~~~~~~l~~~G~~~ 149 (230)
T 2y8u_A 75 GLLQRMRDEG-HQVGAHTYDHVSLPSLGYDGIASQMTRLEEVIRPALG--VAPA--YMRPPYLETNELVLQVMRDLDYRV 149 (230)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHS--SCBS--EECCGGGCCCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHCC-CEEEecccCCCCcccCCHHHHHHHHHHHHHHHHHHhC--CCCc--EEECCCCCCCHHHHHHHHHcCCEE
Confidence 6789999999 7899999998887778899999999999999988889 5443 4556676 5678888999999964
Q ss_pred e
Q psy10965 101 V 101 (400)
Q Consensus 101 ~ 101 (400)
+
T Consensus 150 ~ 150 (230)
T 2y8u_A 150 I 150 (230)
T ss_dssp E
T ss_pred E
Confidence 3
No 19
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=88.47 E-value=0.77 Score=41.79 Aligned_cols=76 Identities=18% Similarity=0.228 Sum_probs=63.1
Q ss_pred HHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeecCCCC-CCHHHHHHHHHCCCCc
Q psy10965 22 ASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFG-HSAEVALEFADMGFDG 100 (400)
Q Consensus 22 ~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~D~FG-hs~~lPqil~~~Gi~~ 100 (400)
+.+|+++++| .|+-+-+|.-++....+.+.+.+++..+.+.+++..| ..+ +-+..=|+| ++..+.+++++.|+..
T Consensus 98 ~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G--~~~-~~~fr~P~G~~~~~~~~~l~~~G~~~ 173 (247)
T 2j13_A 98 DLLLRMKDEG-HIIGNHSWSHPDFTAVNDEKLREELTSVTEEIKKVTG--QKE-VKYVRPPRGVFSERTLALTKEMGYYN 173 (247)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHC--CSC-CCEECCGGGEECHHHHHHHHHTTCEE
T ss_pred HHHHHHHHCC-CEEEecCCCCcChhhCCHHHHHHHHHHHHHHHHHHhC--CCC-CcEEeCCCCCCCHHHHHHHHHCCCEE
Confidence 6789999999 6799999998887778899999999999999998899 531 335556677 4778889999999975
Q ss_pred e
Q psy10965 101 V 101 (400)
Q Consensus 101 ~ 101 (400)
+
T Consensus 174 v 174 (247)
T 2j13_A 174 V 174 (247)
T ss_dssp E
T ss_pred E
Confidence 4
No 20
>3vus_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; deacetyl hydrolase; 1.65A {Escherichia coli}
Probab=87.37 E-value=2.2 Score=39.22 Aligned_cols=83 Identities=16% Similarity=0.196 Sum_probs=63.5
Q ss_pred HHHHHHHHHcCceEEEcceeeecCCCC-----------------------CC----HHHHHHHHHHHHHHHHHhcCCCCC
Q psy10965 21 RASVKELVDQGRLEFLLGGWCMSDEAT-----------------------PH----YSSLIDQMTLGLKYLNDTFGECGQ 73 (400)
Q Consensus 21 ~~~vk~lV~~Grle~vgg~~v~~De~l-----------------------~~----~Eslirql~~G~~~~~~~fG~~~~ 73 (400)
.++||+++++|-+||-+-+|..+.-.. .+ .+.+.+.+....+.+++..| ..
T Consensus 126 ~~~lr~m~~~G~~eIgsHT~~hH~~~~~~~~G~~~p~~~~~~y~~~~~~~es~~~~~~~i~~ei~~s~~~l~~~~G--~~ 203 (268)
T 3vus_A 126 WQQVREVARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTKVE--VN 203 (268)
T ss_dssp HHHHHHHHHTTSEEECBCCSSCCSBCCCC-----CBTTSSCCEETTTTEECCHHHHHHHHHHHHHHHHHHHHHHSC--CC
T ss_pred HHHHHHHHHCCCeEEecCccccccccccccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHhC--CC
Confidence 478999999999999999998443211 12 35678889999999999999 65
Q ss_pred cceeeecCCCCC-CHHHHHHHHHCCCCceeeeccc
Q psy10965 74 PRVAWQIDPFGH-SAEVALEFADMGFDGVFFGRID 107 (400)
Q Consensus 74 ~~v~w~~D~FGh-s~~lPqil~~~Gi~~~~~~R~~ 107 (400)
|+ +..=|||. +..+-++++++|++.+++.+..
T Consensus 204 ~~--~fr~PyG~~n~~~~~~~~~~Gy~~a~t~~~g 236 (268)
T 3vus_A 204 PH--VFVWPYGEANGIAIEELKKLGYDMFFTLESG 236 (268)
T ss_dssp CC--EEECGGGCCCHHHHHHHHHTTCCEEECCCSS
T ss_pred CC--EEEeCCCcCCHHHHHHHHHCCCcEEEEecCC
Confidence 43 44558885 6777889999999988876554
No 21
>3qbu_A Putative uncharacterized protein; metallo enzyme, peptidoglycan, TIM barrel, deacetylase, HYDR; 2.57A {Helicobacter pylori}
Probab=86.32 E-value=1.3 Score=41.99 Aligned_cols=80 Identities=16% Similarity=0.142 Sum_probs=64.9
Q ss_pred HHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeecCCCCCCHHHHHHHHHCCCCce
Q psy10965 22 ASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGHSAEVALEFADMGFDGV 101 (400)
Q Consensus 22 ~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~D~FGhs~~lPqil~~~Gi~~~ 101 (400)
+.+|+++++|- ||-+-+|.-.+....+.|.+.++|..+.+.+++.+| ..| .+|-+=-...+..+.+++++.||.+.
T Consensus 104 ~~v~~i~~~Gh-EIg~H~~~H~~~~~~s~~~~~~ei~~~~~~l~~~~G--~~p-~~fr~P~g~~~~~~~~~l~e~G~~yd 179 (326)
T 3qbu_A 104 EQMKMIVDAGH-EVGAHGYSHENPIAMSTKQEEDVLLKSVELIKDLTG--KAP-TGYVAPWWEFSNITNELLLKHGFKYD 179 (326)
T ss_dssp HHHHHHHTTTC-EEEBCCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHS--SCC-CEECCGGGCCSSHHHHHHHTTTCCEE
T ss_pred HHHHHHHHcCC-EEEeCCCCCcChhhCCHHHHHHHHHHHHHHHHHHHC--CCC-cEEECCCCCCCHHHHHHHHHcCCEEE
Confidence 57888999997 899999988887778999999999999999988899 544 34554334567889999999999975
Q ss_pred eeec
Q psy10965 102 FFGR 105 (400)
Q Consensus 102 ~~~R 105 (400)
.-.+
T Consensus 180 ss~~ 183 (326)
T 3qbu_A 180 HSLM 183 (326)
T ss_dssp CCCC
T ss_pred eecc
Confidence 5443
No 22
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=84.83 E-value=1.9 Score=39.21 Aligned_cols=73 Identities=14% Similarity=0.126 Sum_probs=60.6
Q ss_pred HHHHHHHcCceEEEcceeee--cCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeecCCC--C-CCHHHHHHHHHCC
Q psy10965 23 SVKELVDQGRLEFLLGGWCM--SDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPF--G-HSAEVALEFADMG 97 (400)
Q Consensus 23 ~vk~lV~~Grle~vgg~~v~--~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~D~F--G-hs~~lPqil~~~G 97 (400)
.+|+++++| .|+-+-+|.- ++-...+.+.+.+++....+.+++..| ..|+ +..-|+ | ++..+.+++++.|
T Consensus 72 ~~~~i~~~G-heIg~Ht~~H~~~~l~~ls~~~~~~ei~~~~~~l~~~~G--~~~~--~fr~P~~~G~~~~~~~~~l~~~G 146 (254)
T 2vyo_A 72 LYRRAVEEG-HNVALRVDPSMDEGYQCLSQDALENNVDREIDTIDGLSG--TEIR--YAAVPICNGQVNSEMYNILTERG 146 (254)
T ss_dssp HHHHHHHTT-CEEEEECCGGGTTCGGGSCHHHHHHHHHHHHHHHHHHHT--SCCC--EEECCCBTTEECHHHHHHHHTTT
T ss_pred HHHHHHhCC-CEEEecCCCCCCcCcccCCHHHHHHHHHHHHHHHHHHHC--CCCe--EEeCCccCCCCCHHHHHHHHHCC
Confidence 789999999 7899999998 777667899999999999999998889 5443 445666 6 5678888999999
Q ss_pred CCc
Q psy10965 98 FDG 100 (400)
Q Consensus 98 i~~ 100 (400)
+..
T Consensus 147 ~~~ 149 (254)
T 2vyo_A 147 VLP 149 (254)
T ss_dssp CEE
T ss_pred CEE
Confidence 874
No 23
>4f9d_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; family 4 carbohydrate esterase, TIM barrel, hydrolase, deace carbohydrate/sugar binding; HET: MES; 1.90A {Escherichia coli} PDB: 4f9j_A*
Probab=71.14 E-value=6.9 Score=40.43 Aligned_cols=83 Identities=16% Similarity=0.198 Sum_probs=63.8
Q ss_pred HHHHHHHHHcCceEEEcceeeec-CCC-----------C-----------CC----HHHHHHHHHHHHHHHHHhcCCCCC
Q psy10965 21 RASVKELVDQGRLEFLLGGWCMS-DEA-----------T-----------PH----YSSLIDQMTLGLKYLNDTFGECGQ 73 (400)
Q Consensus 21 ~~~vk~lV~~Grle~vgg~~v~~-De~-----------l-----------~~----~Eslirql~~G~~~~~~~fG~~~~ 73 (400)
.++||++.++|-+||-+-+|..| +.. + .+ .+.+.+.|...++.+++.+| ..
T Consensus 130 w~qlrem~~sG~~EIGsHT~shH~~l~~~p~G~~~Pa~l~r~~~~~~~~~es~~e~~~~i~~EL~~Sk~~Le~~lG--~~ 207 (618)
T 4f9d_A 130 WQQVREVARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTKVE--VN 207 (618)
T ss_dssp HHHHHHHHHHTSEEECBCCSSCCSEEECSTTCCEEEGGGSCCEETTTTEECCHHHHHHHHHHHHHHHHHHHHHHHC--CC
T ss_pred HHHHHHHHHCCCcEEeecccccccccccccccccccchhcccccccccccCCHHHHHHHHHHHHHHHHHHHHHhcC--CC
Confidence 48899999999999888899733 210 0 12 26789999999999999999 54
Q ss_pred cceeeecCCCC-CCHHHHHHHHHCCCCceeeeccc
Q psy10965 74 PRVAWQIDPFG-HSAEVALEFADMGFDGVFFGRID 107 (400)
Q Consensus 74 ~~v~w~~D~FG-hs~~lPqil~~~Gi~~~~~~R~~ 107 (400)
|+ +..=||| ++..+-.+++++|++.+++.+..
T Consensus 208 ~~--~FayPyG~~n~~~~~~ake~Gy~~afTt~~G 240 (618)
T 4f9d_A 208 PH--VFVWPYGEANGIAIEELKKLGYDMFFTLESG 240 (618)
T ss_dssp CC--EEECGGGCCCHHHHHHHHHTTCCEEECCCSS
T ss_pred CC--EEEcCCCCCCHHHHHHHHHcCCEEEEEecCC
Confidence 44 3445888 57888899999999998876544
No 24
>2c1i_A Peptidoglycan glcnac deacetylase; carbohydrate esterase, peptidoglycan deacetylase, metalloenzyme, D275N mutant, hydrolase; HET: MES; 1.35A {Streptococcus pneumoniae} SCOP: c.6.2.3 d.341.1.1 PDB: 2c1g_A
Probab=64.95 E-value=10 Score=37.41 Aligned_cols=71 Identities=14% Similarity=0.143 Sum_probs=57.1
Q ss_pred HHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeecCCCCCCHHHHHHHHHCCCC
Q psy10965 22 ASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGHSAEVALEFADMGFD 99 (400)
Q Consensus 22 ~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~D~FGhs~~lPqil~~~Gi~ 99 (400)
+.+|+++++| .|+-+-+|.-++....+.+.+.+++..+.+.+++..| ..|+ +..=|||... +.+++.+|+.
T Consensus 279 ~~lr~m~~~G-heIgnHT~sH~~l~~ls~~~~~~EI~~s~~~L~~~~G--~~~~--~fr~PyG~~n--~~v~~~~G~~ 349 (431)
T 2c1i_A 279 DLVKRIKSEG-HVVGNHSWSHPILSQLSLDEAKKQITDTEDVLTKVLG--SSSK--LMRPPYGAIT--DDIRNSLDLS 349 (431)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHS--CCCC--EECCGGGCCC--HHHHHTSSCE
T ss_pred HHHHHHHHCC-CEEeecCCCCcccccCCHHHHHHHHHHHHHHHHHhhC--CCCe--EEECCCCCCC--HHHHHHCCCe
Confidence 6789999999 7899999998887777899999999999999998899 5443 4456888765 4566777764
No 25
>4hd5_A Polysaccharide deacetylase; TIM barrel, hydrolase; 1.90A {Bacillus cereus}
Probab=64.42 E-value=9.2 Score=36.69 Aligned_cols=79 Identities=16% Similarity=0.119 Sum_probs=57.9
Q ss_pred HHHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeecCCCCC-CHHHHHHHHHCCCC
Q psy10965 21 RASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGH-SAEVALEFADMGFD 99 (400)
Q Consensus 21 ~~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~D~FGh-s~~lPqil~~~Gi~ 99 (400)
.++||++.++|-+||-+-+|.-++-.-. ..+-++|...++.+++.+| ..++ +..=|||. +...-.+++ .|++
T Consensus 247 w~qIrem~~~G~~eIGsHT~sH~~L~~l--s~~e~EI~~Sk~~Le~~lG--~~v~--~FAYPyG~yn~~v~~~ak-~gy~ 319 (360)
T 4hd5_A 247 TSEIKEMVDSGIFSVQSHTATHADLPKI--TNYEEELKGSKEKLEKITG--KPVI--AIAYXFGHVDDKVVTETK-KYYQ 319 (360)
T ss_dssp HHHHHHHHHTTSEEEEECCSSCCCGGGC--SCHHHHHHHHHHHHHHHHS--SCCC--EEECGGGCCCHHHHHHHT-TTCS
T ss_pred HHHHHHHHHcCCceeeccCCcccccccC--CHHHHHHHHHHHHHHHHhC--CCCc--EEEcCCCCCCHHHHHHHH-hCCc
Confidence 5789999999999998889887764333 2344789999999999999 5443 44558985 555555655 4888
Q ss_pred ceeeecc
Q psy10965 100 GVFFGRI 106 (400)
Q Consensus 100 ~~~~~R~ 106 (400)
..++.+.
T Consensus 320 ~AfTt~~ 326 (360)
T 4hd5_A 320 FATTTKP 326 (360)
T ss_dssp EEEEEEE
T ss_pred EEEEecc
Confidence 8776543
No 26
>2w3z_A Putative deacetylase; PGDA, glcnac DE-N-acetylase, hydrolase, divale metal cation dependent, carbohydrate esterase family 4; 1.45A {Streptococcus mutans UA159}
Probab=63.35 E-value=10 Score=35.59 Aligned_cols=77 Identities=13% Similarity=0.163 Sum_probs=57.9
Q ss_pred HHHHHHHHHcCceEEEcceeeecCCC-----CCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeecCCCCCCHH-----HH
Q psy10965 21 RASVKELVDQGRLEFLLGGWCMSDEA-----TPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGHSAE-----VA 90 (400)
Q Consensus 21 ~~~vk~lV~~Grle~vgg~~v~~De~-----l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~D~FGhs~~-----lP 90 (400)
.+.+|+++++| .|+-+-+|.-++.. ..+.+.+.+++..+.+.+++..| ...+.-+..=|+|.... +.
T Consensus 150 p~~vr~i~~~G-heIgnHt~sH~~~~~~~~~~ls~~~~~~Ei~~~~~~L~~~~G--~~~~p~~fR~PyG~~~~~~~~~~~ 226 (311)
T 2w3z_A 150 KPILQRQITEG-HALGIHSFSHVYSLLYPNRVGNTQQIVSEVTRTQNALKDQLG--QNFKTGVWRYPGGHLSWTGLEAAD 226 (311)
T ss_dssp HHHHHHHHHTT-CEEEECCSSCCHHHHSGGGBCCHHHHHHHHHHHHHHHHHHHC--TTBCCCEECCTTCGGGCBCCHHHH
T ss_pred HHHHHHHHHCC-CeeeccCCccccccccccCCCCHHHHHHHHHHHHHHHHHHhC--CCCCCcEEECCCCCcChhHHHHHH
Confidence 36789999999 67888999875532 24789999999999999988888 32233456678887542 45
Q ss_pred HHHHHCCCCc
Q psy10965 91 LEFADMGFDG 100 (400)
Q Consensus 91 qil~~~Gi~~ 100 (400)
+++++.|+..
T Consensus 227 ~~l~~~G~~~ 236 (311)
T 2w3z_A 227 KQLAAQGIQW 236 (311)
T ss_dssp HHHHTTTCEE
T ss_pred HHHHHCCCEE
Confidence 7899999865
No 27
>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7
Probab=49.69 E-value=2.5 Score=35.86 Aligned_cols=16 Identities=25% Similarity=0.526 Sum_probs=13.9
Q ss_pred cceeeecCCCCCCHHH
Q psy10965 74 PRVAWQIDPFGHSAEV 89 (400)
Q Consensus 74 ~~v~w~~D~FGhs~~l 89 (400)
.+.||+.|+||+++++
T Consensus 105 ~~~G~v~D~fGv~W~i 120 (163)
T 1u69_A 105 SACGWCRDKWGISWQI 120 (163)
T ss_dssp CSTTEEECTTSCEEEE
T ss_pred EEEEEEECCCCCEEEE
Confidence 3889999999999973
No 28
>1ldd_A APC2WHB, anaphase promoting complex; ubiquitin, ligase, ubiquitination, ring finger, winged-helix; 2.00A {Saccharomyces cerevisiae} SCOP: a.4.5.34
Probab=43.71 E-value=16 Score=26.51 Aligned_cols=24 Identities=29% Similarity=0.607 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHcCceEE-Ecceee
Q psy10965 18 EQVRASVKELVDQGRLEF-LLGGWC 41 (400)
Q Consensus 18 p~~~~~vk~lV~~Grle~-vgg~~v 41 (400)
++.++=+.++|++|+||. .||-|=
T Consensus 48 ~eL~~fL~~~v~e~kL~~~~gG~Yk 72 (74)
T 1ldd_A 48 QQLEGYLNTLADEGRLKYIANGSYE 72 (74)
T ss_dssp HHHHHHHHHHHHTTSEECCTTTEEE
T ss_pred HHHHHHHHHHHhCCeEEEeCCCEEe
Confidence 567777899999999996 488774
No 29
>2og0_A Excisionase; protein-DNA complex, DNA architectural protein, 'winged'HELI protein, phage excision; 1.90A {Enterobacteria phage lambda} SCOP: a.6.1.7 PDB: 1lx8_A 1rh6_A 2ief_A
Probab=38.05 E-value=33 Score=22.97 Aligned_cols=35 Identities=14% Similarity=0.193 Sum_probs=25.9
Q ss_pred HHHHHhhhC-HHHHHHHHHHHHcCce----EEEcceeeec
Q psy10965 9 FWRWWEEQN-EQVRASVKELVDQGRL----EFLLGGWCMS 43 (400)
Q Consensus 9 ~~~W~~~~~-p~~~~~vk~lV~~Grl----e~vgg~~v~~ 43 (400)
+.+|-+... |-....|++++++|+| .-+|+-|--.
T Consensus 5 l~EwA~~~~~~~s~~Tl~r~ar~G~I~Pp~~KvGr~wrv~ 44 (52)
T 2og0_A 5 LQEWNARQRRPRSLETVRRWVRESRIFPPPVKDGREYLFH 44 (52)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHTTCEESCCEEETTEEEEE
T ss_pred HHHHHHHhcCCCCHHHHHHHHHCCCCCCcccccCCEEEEc
Confidence 345555542 5567899999999999 8899877644
No 30
>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7
Probab=33.25 E-value=7.9 Score=31.52 Aligned_cols=15 Identities=40% Similarity=0.729 Sum_probs=13.4
Q ss_pred ceeeecCCCCCCHHH
Q psy10965 75 RVAWQIDPFGHSAEV 89 (400)
Q Consensus 75 ~v~w~~D~FGhs~~l 89 (400)
+.||..|+||+++++
T Consensus 111 ~~g~v~Dp~G~~W~i 125 (139)
T 1tsj_A 111 EFAWVQDKFGVSFQL 125 (139)
T ss_dssp EEEEEECTTSCEEEE
T ss_pred eEEEEECCCCCEEEE
Confidence 799999999999864
No 31
>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}
Probab=32.23 E-value=67 Score=27.26 Aligned_cols=73 Identities=14% Similarity=0.233 Sum_probs=36.9
Q ss_pred hcccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcccccccccccCCCCCCCeE---EEEEcCCCC
Q psy10965 322 QHHDAVSGTERQHVTNDYSLYLYEGIQAAMKIINVAYRHLLGDYLPEQQPCLLMNVSQCELPSPTINY---ITLYNRFRL 398 (400)
Q Consensus 322 q~HD~ItGTs~~~V~~d~~~~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~n~s~~~~~~~~~~~---~~v~Np~~~ 398 (400)
+||--+-.++...|.++..--...-+..++..+ .++|+...++..... .++.. +.....-.+ +-|.||.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~f~---~~ki~~~~~PeV~v~-~v~~~--~~~l~~~~~~l~LrV~NPN~~ 76 (174)
T 1yyc_A 3 HHHHHLEASADEKVVEEKASVISSLLDKAKGFF---AEKLANIPTPEATVD-DVDFK--GVTRDGVDYHAKVSVKNPYSQ 76 (174)
T ss_dssp CCSCCSSSCHHHHHHHHHHHHHHHHHHHHHHHH---HHTTTTSCCCEEEEE-EEEEE--EECSSSEEEEEEEEEEECSSS
T ss_pred ccccccccccchhHHHHhhhhhhHHHHHhhhhH---HHhhcCCCCCEEEEE-EeEEe--ccccceEEEEEEEEEECCCCC
Confidence 577778888888888776644434444444443 344443211111110 01110 112223334 899999988
Q ss_pred CC
Q psy10965 399 SM 400 (400)
Q Consensus 399 ~~ 400 (400)
++
T Consensus 77 pL 78 (174)
T 1yyc_A 77 SI 78 (174)
T ss_dssp CC
T ss_pred Cc
Confidence 75
No 32
>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0
Probab=29.12 E-value=10 Score=30.86 Aligned_cols=15 Identities=27% Similarity=0.645 Sum_probs=13.2
Q ss_pred ceeeecCCCCCCHHH
Q psy10965 75 RVAWQIDPFGHSAEV 89 (400)
Q Consensus 75 ~v~w~~D~FGhs~~l 89 (400)
+.||..|+|||++++
T Consensus 120 ~~~~~~Dp~G~~W~i 134 (138)
T 3oms_A 120 KFGWLNDKYGVSWQL 134 (138)
T ss_dssp EEEEEECTTSCEEEE
T ss_pred EEEEEECCCCCEEEE
Confidence 789999999998754
No 33
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=23.65 E-value=2.1e+02 Score=23.51 Aligned_cols=45 Identities=18% Similarity=0.363 Sum_probs=30.5
Q ss_pred cCCCceEEeee-CCCCCcchhHHHHHHHHHHHHHHccCCCCeEEEecC
Q psy10965 191 YRTNNVIITMG-GDFHYVVASAWFKNIDKLIKYVNAKLNSDVHVLYST 237 (400)
Q Consensus 191 ~~t~~il~~~G-~D~~~~~a~~~f~~~~~li~~~n~~~~~~~~i~~sT 237 (400)
...+.|++.+| .|... ..+++-.+++++++.+.+.. +..++.+.|
T Consensus 73 ~~pd~Vvi~~G~ND~~~-~~~~~~~~l~~ii~~l~~~~-p~~~ii~~~ 118 (200)
T 4h08_A 73 TKFDVIHFNNGLHGFDY-TEEEYDKSFPKLIKIIRKYA-PKAKLIWAN 118 (200)
T ss_dssp SCCSEEEECCCSSCTTS-CHHHHHHHHHHHHHHHHHHC-TTCEEEEEC
T ss_pred CCCCeEEEEeeeCCCCC-CHHHHHHHHHHHHHHHhhhC-CCccEEEec
Confidence 45666777888 56543 34555678888888887764 666766655
No 34
>1pm6_A Excisionase; antiparallel beta-sheet, winged-helix, CIS-trans-trans triproline, gene regulation; NMR {Enterobacteria phage HK022} SCOP: a.6.1.7
Probab=22.62 E-value=58 Score=23.40 Aligned_cols=35 Identities=14% Similarity=0.193 Sum_probs=25.7
Q ss_pred HHHHHhhhC-HHHHHHHHHHHHcCce----EEEcceeeec
Q psy10965 9 FWRWWEEQN-EQVRASVKELVDQGRL----EFLLGGWCMS 43 (400)
Q Consensus 9 ~~~W~~~~~-p~~~~~vk~lV~~Grl----e~vgg~~v~~ 43 (400)
+.+|-+... |-....|++++++|+| .-+|+-|--.
T Consensus 5 l~EwA~~~~~~~s~~Tl~r~ar~G~I~Pp~~KvGr~Wrv~ 44 (72)
T 1pm6_A 5 LQEWNARQRRPRSLETVRRWVRESRIFPPPVKDGREYLFH 44 (72)
T ss_dssp HHHHHHHSSSCCCHHHHHHHHHHTCEESCCEECSSSEEEE
T ss_pred HHHHHHHhcCCCCHHHHHHHHHCCCCCCchhhcCCEEEEC
Confidence 345655542 5567889999999999 8889877644
No 35
>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}
Probab=21.35 E-value=19 Score=30.58 Aligned_cols=15 Identities=13% Similarity=0.198 Sum_probs=13.0
Q ss_pred ceeeecCCCCCCHHH
Q psy10965 75 RVAWQIDPFGHSAEV 89 (400)
Q Consensus 75 ~v~w~~D~FGhs~~l 89 (400)
+.||..|+||+.+++
T Consensus 148 r~g~v~DpfG~~W~i 162 (172)
T 3l20_A 148 KMGVFTDKYGVRWML 162 (172)
T ss_dssp EEEEEECTTSCEEEE
T ss_pred EEEEEECCCCCEEEE
Confidence 799999999998753
No 36
>2o7a_A Lysozyme; protein folding, protein stability, circular permutant, hydrolase; HET: SME; 0.84A {Enterobacteria phage T4}
Probab=20.81 E-value=18 Score=29.02 Aligned_cols=25 Identities=16% Similarity=0.219 Sum_probs=21.6
Q ss_pred HhhhCHHHHHHHHHHHHcCceEEEc
Q psy10965 13 WEEQNEQVRASVKELVDQGRLEFLL 37 (400)
Q Consensus 13 ~~~~~p~~~~~vk~lV~~Grle~vg 37 (400)
|..|.|..-.++-+.++.|.|+..+
T Consensus 80 Wa~Qtp~Ra~r~~~~m~~g~~~~y~ 104 (124)
T 2o7a_A 80 WYNQTPNRAKRVITTFRTGTWDAYK 104 (124)
T ss_dssp HHHHSHHHHHHHHHHHHHSSCTTTC
T ss_pred hhhhCcHHHHHHHHHHHCCCccccC
Confidence 5668999999999999999987544
Done!