BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10969
(204 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9W1Y1|EMC89_DROME ER membrane protein complex subunit 8/9 homolog OS=Drosophila
melanogaster GN=CG3501 PE=1 SV=1
Length = 203
Score = 169 bits (428), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 124/201 (61%), Gaps = 12/201 (5%)
Query: 1 MSEISFTDRAYCKMILHAVKYPHCSINGVLLAVTVPTTKESPKKLTYVDAIPLFHLCLQV 60
M + ++RAY K+I HA KYPH ++NG+LLA T+K S ++ VDAIPLFH CL V
Sbjct: 1 MCDYKVSERAYAKLIFHAAKYPHQAVNGLLLAEK--TSKGS--QVEIVDAIPLFHQCLYV 56
Query: 61 TPMIEIALTQISSYAQSNGLVIAGYYLANENIKDVSYDKPYQSRIADKIAEFFPAACLIV 120
TPM E+AL I ++A+ GLVIAGYY A EN D DK ++IADKI E F AC +V
Sbjct: 57 TPMAEVALMLIDAHAEREGLVIAGYYAAPENFYDNQVDKTPAAKIADKIQENFKNACFVV 116
Query: 121 LDNRKLTQTMQESALIV---AQNSDGKWKPVSKNSIIVDQT--TLSSVSTLIQRNISRHL 175
+DN+ +T +A+ V +S +W SK + Q TL VS L++R R L
Sbjct: 117 VDNKLMTLQHDRAAIQVFNCPGDSGARW---SKAKFTLSQASDTLEGVSLLLKRGAMRDL 173
Query: 176 VDFDNHLDNLSADWTNSELNE 196
VDFDNHLDN +WTN LN+
Sbjct: 174 VDFDNHLDNPDKNWTNDFLNQ 194
>sp|Q5U1W7|EMC9_RAT ER membrane protein complex subunit 9 OS=Rattus norvegicus GN=Emc9
PE=2 SV=1
Length = 206
Score = 161 bits (407), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 122/202 (60%), Gaps = 7/202 (3%)
Query: 1 MSEISFTDRAYCKMILHAVKYPHCSINGVLLAVTVPTTKESPKKLTYVDAIPLFHLCLQV 60
M E+ + RAY KM LHA +YPH ++NG+LLA P T+ S + L D +PLFH L +
Sbjct: 1 MGEVEISARAYGKMCLHASRYPHAAVNGLLLA---PATR-SGECLCLTDCVPLFHSHLAL 56
Query: 61 TPMIEIALTQISSYAQSNGLVIAGYYLANENIKDVSYDKPYQSRIADKIAEFFPAACLIV 120
+ M+E+AL Q+ +A GLV+AGYY AN + D S P +IA +IAEFFP A LI+
Sbjct: 57 SVMLEVALNQVDVWATQAGLVVAGYYHANAVLDDQS-PGPLALKIAGRIAEFFPNAVLIM 115
Query: 121 LDNRKLTQTMQESALIVAQNSDGKWKPVSKNSIIVD--QTTLSSVSTLIQRNISRHLVDF 178
LDN+KL + +IV +N +W P KN ++ + + V L++ +HLVDF
Sbjct: 116 LDNKKLVTWPRVPPVIVLENQGLQWVPKDKNLVMWRDWEESRQMVGALLEGRAHQHLVDF 175
Query: 179 DNHLDNLSADWTNSELNEIIEK 200
D HLD++ DWTN LN I +
Sbjct: 176 DCHLDDIRQDWTNQRLNTQITQ 197
>sp|Q9DB76|EMC9_MOUSE ER membrane protein complex subunit 9 OS=Mus musculus GN=Emc9 PE=2
SV=1
Length = 206
Score = 159 bits (403), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 120/202 (59%), Gaps = 7/202 (3%)
Query: 1 MSEISFTDRAYCKMILHAVKYPHCSINGVLLAVTVPTTKESPKKLTYVDAIPLFHLCLQV 60
M E+ + RAY KM LHA +YPH ++NG+LLA P T S + L D +PLFH L +
Sbjct: 1 MGEVEISARAYGKMCLHASRYPHAAVNGLLLA---PATG-SGECLCLTDCVPLFHSHLAL 56
Query: 61 TPMIEIALTQISSYAQSNGLVIAGYYLANENIKDVSYDKPYQSRIADKIAEFFPAACLIV 120
+ M+E+AL Q+ + GLV+AGYY AN + D S P +IA +IAEFFP A LI+
Sbjct: 57 SVMLEVALNQVDVWGAQAGLVVAGYYHANAVLDDQS-PGPLALKIAGRIAEFFPRAVLIM 115
Query: 121 LDNRKLTQTMQESALIVAQNSDGKWKPVSKNSIIVD--QTTLSSVSTLIQRNISRHLVDF 178
LDN+KL + +IV +N +W P KN ++ + + V L++ +HLVDF
Sbjct: 116 LDNKKLVTRPRVPPVIVLENQGLQWVPKDKNLVMWRDWEESRQMVGALLEGRAHQHLVDF 175
Query: 179 DNHLDNLSADWTNSELNEIIEK 200
D HLD++ DWTN LN I +
Sbjct: 176 DCHLDDIRQDWTNQRLNTQITQ 197
>sp|O70378|EMC8_MOUSE ER membrane protein complex subunit 8 OS=Mus musculus GN=Emc8 PE=1
SV=1
Length = 207
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 120/205 (58%), Gaps = 9/205 (4%)
Query: 1 MSEISFTDRAYCKMILHAVKYPHCSINGVLLAVTVPTTKESPKKLT----YVDAIPLFHL 56
M + T +AYCKM+LH KYPHC++NG+L+A KE P +VD IPLFH
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAERQRPRKEHPPGAGSHTLFVDCIPLFHG 60
Query: 57 CLQVTPMIEIALTQISSYAQSNGLVIAGYYLANENIKDVSYDKPYQSRIADKIAEFFPAA 116
L +TPM+E+ALT I S+ + N VIAGYY ANE +KD S ++ ++A +IAE F A
Sbjct: 61 TLALTPMLEVALTLIDSWCKDNSYVIAGYYQANERVKDASPNQ-VAEKVASRIAEGFGDA 119
Query: 117 CLIVLDNRKLTQTMQESALIVAQNSDGKWKPVSKNSIIVD---QTTLSSVSTLIQRNISR 173
LI++DN K T + V + + +W+ + + + S S L R+
Sbjct: 120 ALIMVDNAKFTMDCAAPTIHVYEQHENRWRCRDPHHDYCEDWPEAQRISASLLDSRSYET 179
Query: 174 HLVDFDNHLDNLSADWTNSELNEII 198
LVDFDNHLD++ +DWTN E+N+ +
Sbjct: 180 -LVDFDNHLDDIRSDWTNPEINKAV 203
>sp|Q5FVL2|EMC8_RAT ER membrane protein complex subunit 8 OS=Rattus norvegicus GN=Emc8
PE=2 SV=1
Length = 207
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 120/205 (58%), Gaps = 9/205 (4%)
Query: 1 MSEISFTDRAYCKMILHAVKYPHCSINGVLLAVTVPTTKESPKKLT----YVDAIPLFHL 56
M + T +AYCKM+LH KYPHC++NG+L+A KE P +VD IPLFH
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAERQRPRKEHPPGAGNHTLFVDCIPLFHG 60
Query: 57 CLQVTPMIEIALTQISSYAQSNGLVIAGYYLANENIKDVSYDKPYQSRIADKIAEFFPAA 116
L +TPM+E+ALT I S+ + N VIAGYY ANE +KD S ++ ++A +IAE F A
Sbjct: 61 TLALTPMLEVALTLIDSWCKDNSYVIAGYYQANERVKDASPNQ-VAEKVASRIAEGFSDA 119
Query: 117 CLIVLDNRKLTQTMQESALIVAQNSDGKWKPVSKNSIIVD---QTTLSSVSTLIQRNISR 173
LI++DN K T + V + + +W+ + + + S S L R+
Sbjct: 120 ALIMVDNAKFTMDCAAPTIHVYEQHENRWRCRDPHHDYCEDWPEAQRISASLLDSRSYET 179
Query: 174 HLVDFDNHLDNLSADWTNSELNEII 198
LVDFDNHLD++ +DWTN E+N+ +
Sbjct: 180 -LVDFDNHLDDIRSDWTNPEINKAV 203
>sp|Q9Y3B6|EMC9_HUMAN ER membrane protein complex subunit 9 OS=Homo sapiens GN=EMC9 PE=1
SV=3
Length = 208
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 117/202 (57%), Gaps = 7/202 (3%)
Query: 1 MSEISFTDRAYCKMILHAVKYPHCSINGVLLAVTVPTTKESPKKLTYVDAIPLFHLCLQV 60
M E+ + AY KM LHA +YPH ++NG+ LA P + E L D +PLFH L +
Sbjct: 1 MGEVEISALAYVKMCLHAARYPHAAVNGLFLA-PAPRSGEC---LCLTDCVPLFHSHLAL 56
Query: 61 TPMIEIALTQISSYAQSNGLVIAGYYLANENIKDVSYDKPYQSRIADKIAEFFPAACLIV 120
+ M+E+AL Q+ + GLV+AGYY AN + D S P +IA +IAEFFP A LI+
Sbjct: 57 SVMLEVALNQVDVWGAQAGLVVAGYYHANAAVNDQS-PGPLALKIAGRIAEFFPDAVLIM 115
Query: 121 LDNRKLTQTMQESALIVAQNSDGKWKPVSKNSIIVD--QTTLSSVSTLIQRNISRHLVDF 178
LDN+KL + +IV +N +W P KN ++ + + V L++ +HLVDF
Sbjct: 116 LDNQKLVPQPRVPPVIVLENQGLRWVPKDKNLVMWRDWEESRQMVGALLEDRAHQHLVDF 175
Query: 179 DNHLDNLSADWTNSELNEIIEK 200
D HLD++ DWTN LN I +
Sbjct: 176 DCHLDDIRQDWTNQRLNTQITQ 197
>sp|O43402|EMC8_HUMAN ER membrane protein complex subunit 8 OS=Homo sapiens GN=EMC8 PE=1
SV=1
Length = 210
Score = 147 bits (372), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 117/208 (56%), Gaps = 12/208 (5%)
Query: 1 MSEISFTDRAYCKMILHAVKYPHCSINGVLLAVT-------VPTTKESPKKLTYVDAIPL 53
M + T +AYCKM+LH KYPHC++NG+L+A +P +VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 54 FHLCLQVTPMIEIALTQISSYAQSNGLVIAGYYLANENIKDVSYDKPYQSRIADKIAEFF 113
FH L + PM+E+ALT I S+ + + VIAGYY ANE +KD S ++ ++A +IAE F
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQ-VAEKVASRIAEGF 119
Query: 114 PAACLIVLDNRKLTQTMQESALIVAQNSDGKWKPVSKNSIIVD---QTTLSSVSTLIQRN 170
LI++DN K T + V ++ + +W+ + + + S S L R+
Sbjct: 120 SDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRDPHHDYCEDWPEAQRISASLLDSRS 179
Query: 171 ISRHLVDFDNHLDNLSADWTNSELNEII 198
LVDFDNHLD++ DWTN E+N+ +
Sbjct: 180 YET-LVDFDNHLDDIRNDWTNPEINKAV 206
>sp|Q32KL5|EMC8_BOVIN ER membrane protein complex subunit 8 OS=Bos taurus GN=EMC8 PE=2
SV=1
Length = 210
Score = 147 bits (372), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 116/207 (56%), Gaps = 10/207 (4%)
Query: 1 MSEISFTDRAYCKMILHAVKYPHCSINGVLLAVT-------VPTTKESPKKLTYVDAIPL 53
M + T +AYCKM+LH KYPHC+++G+L+A +P +VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVDGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 54 FHLCLQVTPMIEIALTQISSYAQSNGLVIAGYYLANENIKDVSYDKPYQSRIADKIAEFF 113
FH L + PM+E+ALT I S+ + N VIAGYY ANE +KD S ++ ++A +IAE F
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDNSYVIAGYYQANERVKDASPNQ-VAEKVASRIAEGF 119
Query: 114 PAACLIVLDNRKLTQTMQESALIVAQNSDGKWKPVSKN-SIIVDQTTLSSVS-TLIQRNI 171
LI++DN K T + V ++ + KW+ + D +S +L+
Sbjct: 120 SDTALIMVDNTKFTMDCVVPTIHVYEHHENKWRCRDPHYDYCEDWPEAQRISASLLDSRS 179
Query: 172 SRHLVDFDNHLDNLSADWTNSELNEII 198
LVDFDNHLD++ DWTN E+N+ +
Sbjct: 180 YETLVDFDNHLDDIRNDWTNPEINKAV 206
>sp|Q9FG71|EMC89_ARATH ER membrane protein complex subunit 8/9 homolog OS=Arabidopsis
thaliana GN=EMB2731 PE=2 SV=1
Length = 208
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 6 FTDRAYCKMILHAVKYPHCSINGVLLAVTVPTTKESPKKLTYV---DAIPLFHLCLQVTP 62
+ AY K++LH++++ ++NGVL+ + SPK V D++PLFH L + P
Sbjct: 13 ISQNAYIKLVLHSLRHKTAAVNGVLVG------RISPKDDGVVEISDSVPLFHSNLALLP 66
Query: 63 MIEIALTQISSYAQSNGLVIAGYYLANENIKDVSYDKPYQSRIADKIAEFFPAACLIVLD 122
+EI+L I + + GL I GY+ ANE DV I D I+ +FP A +++L+
Sbjct: 67 PLEISLIMIEEHYVAQGLSIVGYFHANERFDDVEL-CGVAKNIGDHISRYFPQAPILLLN 125
Query: 123 NRK---LTQTMQESAL--IVAQNSDGKWKPVSKNS---IIVDQTTLSSV-STLIQRNISR 173
N+K L++ + S + + +++ W+ V + +++ + + + V S I +
Sbjct: 126 NKKLEALSKGKERSPVMQLCVKDASKNWRVVGADGGSKLLLKEPSANVVLSDYISSEKWK 185
Query: 174 HLVDFDNHLDNLSADWTNSEL 194
+ D D+HLD+++ DW N L
Sbjct: 186 DVTDVDDHLDDVTKDWLNPGL 206
>sp|Q55FM0|EMC89_DICDI ER membrane protein complex subunit 8/9 homolog OS=Dictyostelium
discoideum GN=DDB_G0268048 PE=3 SV=1
Length = 192
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 15/198 (7%)
Query: 2 SEISFTDRAYCKMILHAVKYPHCSINGVLLAVTVPTTKESPKKLTYVDAIPLFHLCLQVT 61
+ IS T A K LH+ K+ S+NG+LL K + D IPLFH +
Sbjct: 3 NNISITTEALSKAHLHSFKHHASSVNGILLG------KADKNSILITDIIPLFH-TQTLL 55
Query: 62 PMIEIALTQISSYAQSNGLVIAGYYLANENIKDVSYDKPYQSRIADKIAEFFPAACLIVL 121
PM E+A+ QI Y + N + + GYY +N+ I + +P +IAD++ C +++
Sbjct: 56 PMFEVAMIQIEKYCRDNNIDMVGYYHSNQCIANELEPEPIAKKIADRLNNELNNMCFLMI 115
Query: 122 DNRKLTQTMQESALIVAQNSDGKWKPVSKNSIIVDQTTLSS-VSTLIQRNISR----HLV 176
+ + S L+ W K I +D T+ S ++ +++RN+ +
Sbjct: 116 SK---IEVNRPSGLVSIDKVGSDWLKNRKTLITIDTTSNSEDINEILKRNLQNIKESQIY 172
Query: 177 DFDNHLDNLSADWTNSEL 194
DF+ +L N + DW N L
Sbjct: 173 DFEEYLSNPTRDWLNKSL 190
>sp|Q0V9F1|GDPP1_XENTR GDP-D-glucose phosphorylase 1 OS=Xenopus tropicalis GN=gdpgp1 PE=2
SV=1
Length = 399
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Query: 58 LQVTPMIEIALTQISSYAQSNGLVIAGYYLANENIKDVSYDKPYQSRIADKIAEFFPA-A 116
L P + + +A N L + G+YL +E + + S KP I + FPA
Sbjct: 213 LSSHPGFRVGFNSLGGFASVNHLHLHGFYLDHELLIESSCSKPLCPEINFHLVTHFPAPG 272
Query: 117 CLIVLDNRKLTQTMQE----SALIVAQN 140
L D + L T Q+ + +VA+N
Sbjct: 273 FLFYTDGKDLKSTAQKICKVTDFLVAKN 300
>sp|A8E5Y3|GDPP1_XENLA GDP-D-glucose phosphorylase 1 OS=Xenopus laevis GN=gdpgp1 PE=2 SV=1
Length = 399
Score = 35.0 bits (79), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Query: 58 LQVTPMIEIALTQISSYAQSNGLVIAGYYLANENIKDVSYDKPYQSRIADKIAEFFPA-A 116
L P + + +A N L + G+YL ++ + S KP + + FPA +
Sbjct: 214 LSAHPGFRVGFNSLGGFASVNHLHLHGFYLDHDLFIESSSSKPLCPEMNFHLITHFPAPS 273
Query: 117 CLIVLDNRKLTQTMQE----SALIVAQN 140
L D R L T Q + +VA+N
Sbjct: 274 FLFYTDGRNLKSTAQNICKVTDFLVAKN 301
>sp|Q8EGF9|TILS_SHEON tRNA(Ile)-lysidine synthase OS=Shewanella oneidensis (strain MR-1)
GN=tilS PE=3 SV=1
Length = 464
Score = 34.3 bits (77), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 29 VLLAVTVPTTKESPKKLTYVDAIPLFHL-----CLQVTPMIEIALTQISSYAQSNGLVIA 83
+LLA+ + PK L + I L CLQV P+++I+ I ++AQ+ LV
Sbjct: 135 ILLALK---RGQGPKGLAAMGQIQPLSLADKGSCLQVRPLLDISREMIETFAQTRQLV-- 189
Query: 84 GYYLANENIKDVSYDKPY 101
++ +E+ +D YD+ +
Sbjct: 190 --HIEDESNQDDKYDRNF 205
>sp|C5B7T0|TILS_EDWI9 tRNA(Ile)-lysidine synthase OS=Edwardsiella ictaluri (strain
93-146) GN=tilS PE=3 SV=1
Length = 439
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 50 AIPLFHLCLQVTPMIEIALTQISSYAQSNGLVIAGYYLANENIKDVSYDKPY-QSRIADK 108
++P F +C Q+ P+++I+ Q+++YAQ + L ++ +++ D +D+ + + RI
Sbjct: 149 SMPFF-VCEQLRPLLDISREQLTAYAQVHDL----SWVEDDSNADARFDRNFLRMRIVPL 203
Query: 109 IAEFFP 114
+ E +P
Sbjct: 204 LRERWP 209
>sp|P78382|S35A1_HUMAN CMP-sialic acid transporter OS=Homo sapiens GN=SLC35A1 PE=2 SV=1
Length = 337
Score = 30.4 bits (67), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 86 YLANENIKDVSYDKPYQSRIADKIAEFFPAACLIVLDNRKLTQTMQESALIV-AQNSDGK 144
+LA N+ Y YQ +I A C +++ NR L++ S ++ A + +
Sbjct: 106 FLALSNLDAAVYQVTYQLKIPC------TALCTVLMLNRTLSKLQWVSVFMLCAGVTLVQ 159
Query: 145 WKPVSKNSIIVDQTTL 160
WKP ++V+Q L
Sbjct: 160 WKPAQATKVVVEQNPL 175
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,047,722
Number of Sequences: 539616
Number of extensions: 2485795
Number of successful extensions: 6374
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 6334
Number of HSP's gapped (non-prelim): 22
length of query: 204
length of database: 191,569,459
effective HSP length: 112
effective length of query: 92
effective length of database: 131,132,467
effective search space: 12064186964
effective search space used: 12064186964
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)