RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy1097
(179 letters)
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 212 bits (541), Expect = 3e-69
Identities = 48/116 (41%), Positives = 76/116 (65%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E I G ++FER+ F L ER+ V ++ Q+CE + ++H +NI H D++PENI+ +R S
Sbjct: 81 EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRS 140
Query: 119 HHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
IKII+FG A+++ P R+LF PE+ PE+ ++ + +DMWS+G + YVL
Sbjct: 141 STIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVL 196
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 211 bits (540), Expect = 2e-68
Identities = 63/116 (54%), Positives = 90/116 (77%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + GGELF+R++ + + LTE D +LF++QICEG+ +MH+ I+HLDLKPENI+CV+R +
Sbjct: 166 EYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDA 225
Query: 119 HHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
IKIIDFGLA++ P +V FGTPEF+ PE++NY+ + +DMWS+GVI Y+L
Sbjct: 226 KQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYML 281
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 209 bits (535), Expect = 1e-67
Identities = 60/116 (51%), Positives = 88/116 (75%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + GGELF+R+ A+D+ ++E + + ++RQ CEG+ +MH ++IVHLD+KPENIMC ++ +
Sbjct: 128 EFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKA 187
Query: 119 HHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
+KIIDFGLA K+NPD +V T EF PEI++ EP+G +DMW+IGV+ YVL
Sbjct: 188 SSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVL 243
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 208 bits (531), Expect = 3e-65
Identities = 54/116 (46%), Positives = 82/116 (70%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + GGELFE+V + ++E + V ++RQ+C+G+ +MH NN VHLDLKPENIM ++ S
Sbjct: 234 EFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRS 293
Query: 119 HHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
+ +K+IDFGL ++P +V GT EF PE+ +P+G +DMWS+GV++Y+L
Sbjct: 294 NELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 349
Score = 65.2 bits (159), Expect = 5e-13
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSES 60
P+PP I + +V+++W P DGG ++T Y +E + A W ++S
Sbjct: 7 VPEPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAKS 62
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 199 bits (508), Expect = 3e-64
Identities = 55/118 (46%), Positives = 80/118 (67%), Gaps = 2/118 (1%)
Query: 59 ESIGGGELFERVVADDF-TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRT 117
E GGE+F + + ++E D + ++QI EGV Y+H+NNIVHLDLKP+NI+ S
Sbjct: 109 EYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIY 168
Query: 118 S-HHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
IKI+DFG+++KI R + GTPE++ PEI+NY+PI +DMW+IG+I Y+L
Sbjct: 169 PLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYML 226
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 196 bits (501), Expect = 1e-63
Identities = 62/118 (52%), Positives = 84/118 (71%), Gaps = 3/118 (2%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRT- 117
E + GGELF+ + + LTE + FL+QI +GV Y+H I H DLKPENIM + +
Sbjct: 88 ELVSGGELFDFLAEKES-LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNV 146
Query: 118 -SHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
+ IK+IDFG+A KI + + +FGTPEF+ PEI+NYEP+G+E+DMWSIGVITY+L
Sbjct: 147 PNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 204
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 197 bits (503), Expect = 1e-63
Identities = 61/118 (51%), Positives = 84/118 (71%), Gaps = 3/118 (2%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + GGELF+ + + L+E + F++QI +GV+Y+H I H DLKPENIM + +
Sbjct: 95 ELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI 153
Query: 119 H--HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
HIK+IDFGLA +I + +FGTPEF+ PEI+NYEP+G+E+DMWSIGVITY+L
Sbjct: 154 PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 198 bits (506), Expect = 2e-63
Identities = 61/118 (51%), Positives = 84/118 (71%), Gaps = 3/118 (2%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + GGELF+ + + L+E + F++QI +GV+Y+H I H DLKPENIM + +
Sbjct: 95 ELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI 153
Query: 119 H--HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
HIK+IDFGLA +I + +FGTPEF+ PEI+NYEP+G+E+DMWSIGVITY+L
Sbjct: 154 PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 197 bits (502), Expect = 3e-63
Identities = 65/118 (55%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRT- 117
E + GGELF+ + + LTE + FL+QI GV Y+H I H DLKPENIM + R
Sbjct: 94 ELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
Query: 118 -SHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
IKIIDFGLA KI+ + + +FGTPEF+ PEI+NYEP+G+E+DMWSIGVITY+L
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 150 bits (380), Expect = 2e-45
Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
Query: 63 GGELFERVVADDFT---LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH 119
GGEL ER+V+ L+E ++Q+ + Y H ++VH DLKPENI+ + H
Sbjct: 104 GGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPH 163
Query: 120 -HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
IKIIDFGLA+ D GT ++ PE+ + + + D+WS GV+ Y L
Sbjct: 164 SPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRD-VTFKCDIWSAGVVMYFL 218
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 149 bits (378), Expect = 3e-45
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH-HI 121
GGELFE +VA +F +E D ++QI E + Y H N IVH +LKPEN++ S+ +
Sbjct: 89 GGELFEDIVAREF-YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAV 147
Query: 122 KIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
K+ DFGLA ++N GTP ++ PE++ +P D+W+ GVI Y+L
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL 200
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 150 bits (381), Expect = 5e-45
Identities = 49/113 (43%), Positives = 70/113 (61%), Gaps = 2/113 (1%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH-HI 121
GGELF+R+V + +ERD ++QI E V Y+H N IVH DLKPEN++ + +
Sbjct: 132 GGELFDRIVEKGY-YSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPL 190
Query: 122 KIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
KI DFGL++ + + + GTP + PEI+ G E DMWS+G+ITY+L
Sbjct: 191 KIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYIL 243
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 149 bits (379), Expect = 2e-44
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH-HI 121
GGELFE +VA +F +E D ++QI E + Y H N IVH +LKPEN++ S+ +
Sbjct: 112 GGELFEDIVAREF-YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAV 170
Query: 122 KIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
K+ DFGLA ++N GTP ++ PE++ +P D+W+ GVI Y+L
Sbjct: 171 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL 223
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 148 bits (377), Expect = 2e-44
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 63 GGELFERVVA---DDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH 119
G +L +V F +E ++RQI E + Y H NNI+H D+KP ++ S+ +
Sbjct: 110 GADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENS 169
Query: 120 H-IKIIDFGLAQKINPDHPP-RVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
+K+ FG+A ++ GTP F+ PE++ EP G D+W GVI ++L
Sbjct: 170 APVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFIL 226
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 146 bits (372), Expect = 4e-44
Identities = 47/113 (41%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH-HI 121
GGELF+R++ TE+D L ++Q+ V Y+H N IVH DLKPEN++ ++ + I
Sbjct: 90 GGELFDRILERGV-YTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKI 148
Query: 122 KIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
I DFGL+ K+ + GTP ++ PE++ +P D WSIGVITY+L
Sbjct: 149 MITDFGLS-KMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYIL 200
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 143 bits (361), Expect = 4e-42
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 46 EMKAGTQPWVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLD 105
+K P E +E G + + DF E+ +RQI + Y+H I H D
Sbjct: 134 VVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRD 193
Query: 106 LKPENIMCVSRTSHHIKIIDFGLAQKINPDHPP-----RVLFGTPEFIPPEIINY--EPI 158
+KPEN + + S IK++DFGL+++ + GTP F+ PE++N E
Sbjct: 194 IKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESY 253
Query: 159 GIESDMWSIGVITYVL 174
G + D WS GV+ ++L
Sbjct: 254 GPKCDAWSAGVLLHLL 269
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 142 bits (359), Expect = 6e-42
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH-HI 121
GGELF++VV + L E C L+ Q+ V Y+H N I+H DLKPEN++ S+ I
Sbjct: 98 GGELFDKVVGNKR-LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLI 156
Query: 122 KIIDFGLAQKINPDHPPRVLFGTPEFIPPEIIN---YEPIGIESDMWSIGVITYVL 174
KI DFG ++ + R L GTP ++ PE++ D WS+GVI ++
Sbjct: 157 KITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 140 bits (355), Expect = 9e-42
Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH-HI 121
GGELFERVV E D ++ + V Y H+ N+ H DLKPEN + ++ + +
Sbjct: 90 GGELFERVVHKRV-FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPL 148
Query: 122 KIIDFGLAQKINPDHPPRVLFGTPEFIPPEII--NYEPIGIESDMWSIGVITYVL 174
K+IDFGLA + P R GTP ++ P+++ Y G E D WS GV+ YVL
Sbjct: 149 KLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLY---GPECDEWSAGVMMYVL 200
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 140 bits (356), Expect = 1e-41
Identities = 46/118 (38%), Positives = 67/118 (56%), Gaps = 9/118 (7%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
GELF+ + L+E++ +R + E + +H+ NIVH DLKPENI+ + IK
Sbjct: 108 KGELFDYLTEKVT-LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN--IK 164
Query: 123 IIDFGLAQKINPDHPPRVLFGTPEFIPPEII------NYEPIGIESDMWSIGVITYVL 174
+ DFG + +++P R + GTP ++ PEII N+ G E DMWS GVI Y L
Sbjct: 165 LTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL 222
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 143 bits (362), Expect = 3e-41
Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH-HI 121
GGELF+ ++ +E D ++Q+ G+ YMH++NIVH DLKPENI+ S+ I
Sbjct: 105 GGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDI 163
Query: 122 KIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
KIIDFGL+ + + GT +I PE++ + D+WS GVI Y+L
Sbjct: 164 KIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYIL 215
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 138 bits (351), Expect = 4e-41
Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH-HI 121
GGELF+ ++ +E D ++Q+ G+ YMH++NIVH DLKPENI+ S+ I
Sbjct: 105 GGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDI 163
Query: 122 KIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
KIIDFGL+ + + GT +I PE++ + D+WS GVI Y+L
Sbjct: 164 KIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYIL 215
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 143 bits (362), Expect = 5e-41
Identities = 46/113 (40%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH-HI 121
GGELFE+++ E D ++QI G+ Y+H++NIVH D+KPENI+ ++ S +I
Sbjct: 130 GGELFEQIINRHK-FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNI 188
Query: 122 KIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
KI+DFGL+ + D+ R GT +I PE++ + + D+WS GVI Y+L
Sbjct: 189 KIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYIL 240
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 141 bits (356), Expect = 7e-41
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Query: 63 GGELFERVVA-DDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH-H 120
GGELF R+ D TER+ ++ I E + Y+H NI H D+KPEN++ S+ +
Sbjct: 143 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 202
Query: 121 IKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
+K+ DFG A++ + TP ++ PE++ E DMWS+GVI Y+L
Sbjct: 203 LKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL 256
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 141 bits (358), Expect = 9e-41
Identities = 43/114 (37%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH-HI 121
GGELFE +VA ++ +E D ++QI E V + H+ +VH +LKPEN++ S+ +
Sbjct: 94 GGELFEDIVAREY-YSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAV 152
Query: 122 KIIDFGLAQKINPDHPP-RVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
K+ DFGLA ++ + GTP ++ PE++ +P G D+W+ GVI Y+L
Sbjct: 153 KLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYIL 206
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 139 bits (352), Expect = 1e-40
Identities = 37/115 (32%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHH-- 120
GGEL ++++ F +ER+ L I + V+Y+H +VH DLKP NI+ V + +
Sbjct: 100 GGELLDKILRQKF-FSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPES 158
Query: 121 IKIIDFGLAQKINPDHPP-RVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
I+I DFG A+++ ++ T F+ PE++ + D+WS+GV+ Y +
Sbjct: 159 IRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTM 213
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 142 bits (359), Expect = 1e-40
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH-HI 121
GGELF+ +++ +E D +RQ+ G+ YMH+N IVH DLKPEN++ S++ +I
Sbjct: 110 GGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANI 168
Query: 122 KIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
+IIDFGL+ + GT +I PE+++ + D+WS GVI Y+L
Sbjct: 169 RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYIL 220
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 139 bits (351), Expect = 2e-40
Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
GELF+ + L+E++ +R + E V ++H NNIVH DLKPENI+ I+
Sbjct: 184 KGELFDYLTEKVA-LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQ--IR 240
Query: 123 IIDFGLAQKINPDHPPRVLFGTPEFIPPEII------NYEPIGIESDMWSIGVITYVL 174
+ DFG + + P R L GTP ++ PEI+ + G E D+W+ GVI + L
Sbjct: 241 LSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTL 298
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 140 bits (356), Expect = 3e-40
Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH-HI 121
GGELF+ ++ E D + ++Q+ GV Y+H++NIVH DLKPEN++ S+ I
Sbjct: 120 GGELFDEIIHRMK-FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALI 178
Query: 122 KIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
KI+DFGL+ + GT +I PE++ + + D+WSIGVI ++L
Sbjct: 179 KIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFIL 230
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 139 bits (353), Expect = 3e-40
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 5/120 (4%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + GGELF++VV + L E C L+ Q+ V Y+H N I+H DLKPEN++ S+
Sbjct: 219 ELMEGGELFDKVVGNKR-LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE 277
Query: 119 H-HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEII---NYEPIGIESDMWSIGVITYVL 174
IKI DFG ++ + R L GTP ++ PE++ D WS+GVI ++
Sbjct: 278 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 337
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 137 bits (347), Expect = 3e-40
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 63 GGELFERVVAD--DFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHH 120
G L+ + + L E + ++ LR + G++++ N IVH ++KP NIM V
Sbjct: 93 CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQ 152
Query: 121 --IKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPI--------GIESDMWSIGVI 170
K+ DFG A+++ D L+GT E++ P++ + G D+WSIGV
Sbjct: 153 SVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVT 212
Query: 171 TYVL 174
Y
Sbjct: 213 FYHA 216
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 136 bits (345), Expect = 7e-40
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH-HI 121
GGELFER+ +E + +R++ V +MH +VH DLKPEN++ + I
Sbjct: 90 GGELFERIKKKKH-FSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEI 148
Query: 122 KIIDFGLAQKINPDHPP-RVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
KIIDFG A+ PD+ P + T + PE++N D+WS+GVI Y +
Sbjct: 149 KIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTM 202
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 136 bits (345), Expect = 9e-40
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 9/117 (7%)
Query: 63 GGELFERVVA-DDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH-H 120
GGELF R+ D TER+ +R I + ++H +NI H D+KPEN++ S+
Sbjct: 110 GGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAV 169
Query: 121 IKIIDFGLAQKINPDHPPRVLF---GTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
+K+ DFG A++ + L TP ++ PE++ E DMWS+GVI Y+L
Sbjct: 170 LKLTDFGFAKETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL 222
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 139 bits (352), Expect = 4e-39
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Query: 63 GGELFERVVA--DDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH- 119
GG+L + + + L E L I + Y+H N I+H DLKPENI+
Sbjct: 102 GGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRL 161
Query: 120 HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
KIID G A++++ GT +++ PE++ + + D WS G + +
Sbjct: 162 IHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFEC 216
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 133 bits (336), Expect = 5e-38
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 63 GGELFERVVAD--DFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHH 120
G L+ + + L E + ++ LR + G++++ N IVH ++KP NIM V
Sbjct: 93 CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQ 152
Query: 121 --IKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPI--------GIESDMWSIGVI 170
K+ DFG A+++ D L+GT E++ P++ + G D+WSIGV
Sbjct: 153 SVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVT 212
Query: 171 TYVL 174
Y
Sbjct: 213 FYHA 216
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 129 bits (327), Expect = 3e-37
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 15/130 (11%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + GG + + E + + ++ + +D++H I H DLKPENI+C
Sbjct: 91 EKMRGGSILSHIHKRRH-FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQ 149
Query: 119 HH-IKIIDFGLAQKINPDHPPRVLF--------GTPEFIPPEIINYEPIGIES-----DM 164
+KI DF L I + + G+ E++ PE++ D+
Sbjct: 150 VSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDL 209
Query: 165 WSIGVITYVL 174
WS+GVI Y+L
Sbjct: 210 WSLGVILYIL 219
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 127 bits (321), Expect = 2e-35
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 10/122 (8%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHH-- 120
L E V DF + + L+Q G+ ++H NIVH DLKP NI+ +H
Sbjct: 101 AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKI 160
Query: 121 -IKIIDFGLAQKINPDHPPRVLF----GTPEFIPPEIIN---YEPIGIESDMWSIGVITY 172
I DFGL +K+ GT +I PE+++ E D++S G + Y
Sbjct: 161 KAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFY 220
Query: 173 VL 174
+
Sbjct: 221 YV 222
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 122 bits (308), Expect = 2e-34
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 18/127 (14%)
Query: 62 GGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHI 121
G +L + ++ + + + + E V +H++ IVH DLKP N + V +
Sbjct: 110 GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM---L 165
Query: 122 KIIDFGLAQKINPDHPPRVLF---GTPEFIPPEIINYEP-----------IGIESDMWSI 167
K+IDFG+A ++ PD V GT ++PPE I I +SD+WS+
Sbjct: 166 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225
Query: 168 GVITYVL 174
G I Y +
Sbjct: 226 GCILYYM 232
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 121 bits (306), Expect = 5e-34
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 18/127 (14%)
Query: 62 GGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHI 121
G +L + ++ + + + + E V +H++ IVH DLKP N + V +
Sbjct: 91 GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM---L 146
Query: 122 KIIDFGLAQKINPDHPPRVLF---GTPEFIPPEII-----------NYEPIGIESDMWSI 167
K+IDFG+A ++ PD V GT ++PPE I + I +SD+WS+
Sbjct: 147 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 206
Query: 168 GVITYVL 174
G I Y +
Sbjct: 207 GCILYYM 213
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 119 bits (300), Expect = 1e-33
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E GE+ + +E + F+ QI G+ Y+H + I+H DL N++
Sbjct: 91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRN-- 148
Query: 119 HHIKIIDFGLAQKINPDHPPRVLF-GTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
+IKI DFGLA ++ H GTP +I PEI G+ESD+WS+G + Y L
Sbjct: 149 MNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTL 205
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 121 bits (304), Expect = 2e-33
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 18/127 (14%)
Query: 62 GGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHI 121
G +L + ++ + + + + E V +H++ IVH DLKP N + V +
Sbjct: 138 GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV---DGML 193
Query: 122 KIIDFGLAQKINPDHPPRVLF---GTPEFIPPEIINYEP-----------IGIESDMWSI 167
K+IDFG+A ++ PD V G ++PPE I I +SD+WS+
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 168 GVITYVL 174
G I Y +
Sbjct: 254 GCILYYM 260
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 118 bits (299), Expect = 3e-33
Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E L E LTE + +LRQI G Y+HRN ++H DLK N+
Sbjct: 95 ELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED-- 151
Query: 119 HHIKIIDFGLAQKI-NPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
+KI DFGLA K+ +VL GTP +I PE+++ + E D+WSIG I Y L
Sbjct: 152 LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 208
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 118 bits (298), Expect = 3e-33
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
G L++ + +++ + RQI E + Y+H I+H DLKP NI S ++K
Sbjct: 99 NGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDE--SRNVK 156
Query: 123 IIDFGLAQKINPDHPPRVLF---------------GTPEFIPPEIINYEPI-GIESDMWS 166
I DFGLA+ ++ L GT ++ E+++ + DM+S
Sbjct: 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYS 216
Query: 167 IGVITYVL 174
+G+I + +
Sbjct: 217 LGIIFFEM 224
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 118 bits (299), Expect = 5e-33
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E GGE+F+ +VA + E++ RQI V Y H+ IVH DLK EN++ +
Sbjct: 94 EYASGGEVFDYLVAHGR-MKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDAD-- 150
Query: 119 HHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEP-IGIESDMWSIGVITYVL 174
+IKI DFG + + G P + PE+ + G E D+WS+GVI Y L
Sbjct: 151 MNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 207
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 118 bits (299), Expect = 5e-33
Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E L E LTE + +LRQI G Y+HRN ++H DLK N+
Sbjct: 121 ELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED-- 177
Query: 119 HHIKIIDFGLAQKI-NPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
+KI DFGLA K+ +VL GTP +I PE+++ + E D+WSIG I Y L
Sbjct: 178 LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 234
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 117 bits (296), Expect = 5e-33
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 4/116 (3%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E G ++ + E+ ++ ++ + Y H ++H D+KPEN++ S
Sbjct: 89 EYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-- 145
Query: 119 HHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
+KI DFG + P L GT +++PPE+I + D+WS+GV+ Y
Sbjct: 146 GELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 200
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 117 bits (296), Expect = 7e-33
Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 23/114 (20%)
Query: 63 GGELFERVVA-DDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH-H 120
GGELF R+ D TER+ ++ I E + Y+H NI H D+KPEN++ S+ +
Sbjct: 99 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 158
Query: 121 IKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
+K+ DFG A E E DMWS+GVI Y+L
Sbjct: 159 LKLTDFGFA--------------------KETTG-EKYDKSCDMWSLGVIMYIL 191
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 119 bits (300), Expect = 2e-32
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 29/141 (20%)
Query: 63 GGELFERVVADDFT------LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSR 116
L + V + + + E + + LRQI GV ++H I+H DLKP+NI+ +
Sbjct: 92 NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTS 151
Query: 117 TSHH-----------IKIIDFGLAQKINPDHPPRVLF-----GTPEFIPPEIIN------ 154
+ I I DFGL +K++ GT + PE++
Sbjct: 152 SRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQ 211
Query: 155 -YEPIGIESDMWSIGVITYVL 174
+ D++S+G + Y +
Sbjct: 212 TKRRLTRSIDIFSMGCVFYYI 232
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 116 bits (292), Expect = 2e-32
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E GEL++ + E+ F+ ++ + + Y H ++H D+KPEN++ +
Sbjct: 94 EFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYK-- 150
Query: 119 HHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
+KI DFG + P R + GT +++PPE+I + + D+W GV+ Y
Sbjct: 151 GELKIADFGWS-VHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEF 205
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 115 bits (290), Expect = 8e-32
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 62 GGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHI 121
+LF+ + L E F Q+ E V + H ++H D+K ENI+ + +
Sbjct: 132 PVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL-IDLNRGEL 189
Query: 122 KIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEP-IGIESDMWSIGVITYVL 174
K+IDFG + D GT + PPE I Y G + +WS+G++ Y +
Sbjct: 190 KLIDFGSGALL-KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 242
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 115 bits (290), Expect = 1e-31
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E GGEL+ER+ +E + F +Q+ GV Y H I H DLK EN + +
Sbjct: 96 EYASGGELYERICNAGR-FSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPA 154
Query: 119 HHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIIN---YEPIGIESDMWSIGVITYVL 174
+KI DFG ++ P+ GTP +I PE++ Y+ G +D+WS GV YV+
Sbjct: 155 PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYD--GKIADVWSCGVTLYVM 211
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 114 bits (288), Expect = 2e-31
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
G +LF + L E RQ+ V Y+ +I+H D+K ENI+ IK
Sbjct: 114 GLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAED--FTIK 170
Query: 123 IIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEP-IGIESDMWSIGVITYVL 174
+IDFG A + GT E+ PE++ P G E +MWS+GV Y L
Sbjct: 171 LIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTL 223
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 111 bits (281), Expect = 8e-31
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + GGELF+ + + E + +QI VDY HR+ +VH DLKPEN++ +
Sbjct: 91 EYVSGGELFDYICKHGR-VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAH-- 147
Query: 119 HHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEP-IGIESDMWSIGVITYVL 174
+ KI DFGL+ ++ R G+P + PE+I+ G E D+WS GVI Y L
Sbjct: 148 MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYAL 204
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 111 bits (281), Expect = 8e-31
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E GGELF+R+ D + E D F Q+ GV Y+H I H D+KPEN++ R
Sbjct: 85 EYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER-- 141
Query: 119 HHIKIIDFGLAQKINPDHPPRVLF---GTPEFIPPEIIN---YEPIGIESDMWSIGVITY 172
++KI DFGLA ++ R+L GT ++ PE++ + D+WS G++
Sbjct: 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH--AEPVDVWSCGIVLT 199
Query: 173 VL 174
+
Sbjct: 200 AM 201
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 112 bits (282), Expect = 1e-30
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
+LF+ + L E F Q+ + + H +VH D+K ENI+ + K
Sbjct: 123 AQDLFDYITEKGP-LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENIL-IDLRRGCAK 180
Query: 123 IIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEP-IGIESDMWSIGVITYVL 174
+IDFG + D P GT + PPE I+ + + +WS+G++ Y +
Sbjct: 181 LIDFGSGALL-HDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDM 232
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 111 bits (279), Expect = 1e-30
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
G ELF+ +V D ++E++ F +QI V+Y HR+ IVH DLKPEN++ ++K
Sbjct: 96 GNELFDYIVQRDK-MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEH--LNVK 152
Query: 123 IIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEP-IGIESDMWSIGVITYVL 174
I DFGL+ + + + G+P + PE+I+ + G E D+WS GVI YV+
Sbjct: 153 IADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVM 205
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 111 bits (279), Expect = 4e-30
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E GGELF+R+ D + E D F Q+ GV Y+H I H D+KPEN++ R
Sbjct: 85 EYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER-- 141
Query: 119 HHIKIIDFGLAQKINPDHPPRVLF---GTPEFIPPEIIN---YEPIGIESDMWSIGVITY 172
++KI DFGLA ++ R+L GT ++ PE++ + D+WS G++
Sbjct: 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH--AEPVDVWSCGIVLT 199
Query: 173 VL 174
+
Sbjct: 200 AM 201
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 111 bits (280), Expect = 4e-30
Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
GGELF+ +V +TE + F +QI ++Y HR+ IVH DLKPEN++ + ++K
Sbjct: 92 GGELFDYIVEKKR-MTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDD--NLNVK 148
Query: 123 IIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEP-IGIESDMWSIGVITYVL 174
I DFGL+ + + + G+P + PE+IN + G E D+WS G++ YV+
Sbjct: 149 IADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVM 201
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 111 bits (279), Expect = 5e-30
Identities = 23/135 (17%), Positives = 52/135 (38%), Gaps = 18/135 (13%)
Query: 57 LSESIGGGELFERVV----ADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIM 112
+ E G L + + + + + F ++ ++ +H I+H D+KP+N +
Sbjct: 145 VGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFI 204
Query: 113 CVSR---------TSHHIKIIDFGLAQKINPDHPPRVLF----GTPEFIPPEIINYEPIG 159
+ S + +ID G + + P +F T F E+++ +P
Sbjct: 205 LGNGFLEQDDEDDLSAGLALIDLGQSIDMK-LFPKGTIFTAKCETSGFQCVEMLSNKPWN 263
Query: 160 IESDMWSIGVITYVL 174
+ D + + Y +
Sbjct: 264 YQIDYFGVAATVYCM 278
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 110 bits (277), Expect = 5e-30
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 14/123 (11%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + G + E L+E + + + +G++Y+H I+H D+KP N++
Sbjct: 118 ELVNQGPVMEVPTLK--PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGE--D 173
Query: 119 HHIKIIDFGLAQKINPDHPPRVLF----GTPEFIPPEIINYEP---IGIESDMWSIGVIT 171
HIKI DFG++ + L GTP F+ PE ++ G D+W++GV
Sbjct: 174 GHIKIADFGVSNEFKGSDA---LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
Query: 172 YVL 174
Y
Sbjct: 231 YCF 233
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 110 bits (278), Expect = 8e-30
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 59 ESIGGGELFERVVA-------DDFTLTERDCVLFLRQICEGVDYMH-RNNIVHLDLKPEN 110
E + + + + + ++ + Y+H NI H D+KP N
Sbjct: 123 EYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSN 182
Query: 111 IMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPI--GIESDMWSIG 168
I+ +K+ DFG + + D + GT EF+PPE + E G + D+WS+G
Sbjct: 183 ILMDKN--GRVKLSDFGES-EYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLG 239
Query: 169 VITYVL 174
+ YV+
Sbjct: 240 ICLYVM 245
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 109 bits (275), Expect = 1e-29
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
G L + A +L E +LR + ++H +VHLD+KP NI + K
Sbjct: 140 GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIF-LGPRG-RCK 197
Query: 123 IIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
+ DFGL ++ V G P ++ PE++ G +D++S+G+ +
Sbjct: 198 LGDFGLLVELGTAGAGEVQEGDPRYMAPELLQ-GSYGTAADVFSLGLTILEV 248
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 111 bits (280), Expect = 2e-29
Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 8/119 (6%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + GGELF+ + + L E++ +QI GVDY HR+ +VH DLKPEN++ +
Sbjct: 96 EYVSGGELFDYICKNGR-LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDA--H 152
Query: 119 HHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIIN---YEPIGIESDMWSIGVITYVL 174
+ KI DFGL+ ++ R G+P + PE+I+ Y G E D+WS GVI Y L
Sbjct: 153 MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYA--GPEVDIWSSGVILYAL 209
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 108 bits (272), Expect = 2e-29
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 63 GGELFERVV-ADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHI 121
G L + + L + + QI +GVDY+H +++ DLKP NI V + +
Sbjct: 104 KGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD--TKQV 161
Query: 122 KIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
KI DFGL + D GT ++ PE I+ + G E D++++G+I
Sbjct: 162 KIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILA 212
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 109 bits (273), Expect = 5e-29
Identities = 20/147 (13%), Positives = 46/147 (31%), Gaps = 22/147 (14%)
Query: 39 MITGYVVEMKAGTQPWVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHR 98
+ P ++ + G L +L + Q+ + +H
Sbjct: 171 WVLSRFFLY-----PRMQSNLQTFGEVLLSHSSTHK-SLVHHARLQLTLQVIRLLASLHH 224
Query: 99 NNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYE-- 156
+VH L+P +I+ + + + + F + + F PPE+
Sbjct: 225 YGLVHTYLRPVDIV-LDQRG-GVFLTGFEHLVRDGARVVSS---VSRGFEPPELEARRAT 279
Query: 157 ---------PIGIESDMWSIGVITYVL 174
+ D W++G++ Y +
Sbjct: 280 ISYHRDRRTLMTFSFDAWALGLVIYWI 306
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 106 bits (268), Expect = 9e-29
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 62 GGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHI 121
G E+ + V + Q+ +G++Y+H IVH D+KP N++ + +
Sbjct: 93 GMQEMLDSVPEK--RFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTG--GTL 148
Query: 122 KIIDFGLAQKINPDHPPRVLF---GTPEFIPPEIIN----YEPIGIESDMWSIGVITYVL 174
KI G+A+ ++P G+P F PPEI N + G + D+WS GV Y +
Sbjct: 149 KISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFS--GFKVDIWSAGVTLYNI 206
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 102 bits (256), Expect = 7e-27
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 18/128 (14%)
Query: 63 GGELF---ERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH 119
G L+ ER+ LTE + L IC G++ +H H DLKP NI+
Sbjct: 114 RGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGD--EG 171
Query: 120 HIKIIDFGLAQKINPDHPPRV----------LFGTPEFIPPEIIN---YEPIGIESDMWS 166
++D G + T + PE+ + + I +D+WS
Sbjct: 172 QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWS 231
Query: 167 IGVITYVL 174
+G + Y +
Sbjct: 232 LGCVLYAM 239
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 103 bits (257), Expect = 9e-27
Identities = 14/113 (12%), Positives = 32/113 (28%), Gaps = 6/113 (5%)
Query: 64 GELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKI 123
+ V + Q+ + +VH P+N+ + + +
Sbjct: 178 FSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLF-IMPDG-RLML 235
Query: 124 IDFGLAQKINPDHPPRVLFGTPEFIPPEII--NYEPIGIESDMWSIGVITYVL 174
D K+ P + P E + + + W +G+ Y +
Sbjct: 236 GDVSALWKVGTRGPASS--VPVTYAPREFLNASTATFTHALNAWQLGLSIYRV 286
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 100 bits (251), Expect = 3e-26
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 15/107 (14%)
Query: 79 ERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPP 138
C+ QI E V+++H ++H DLKP NI +K+ DFGL ++ D
Sbjct: 117 RSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM--DDVVKVGDFGLVTAMDQDEEE 174
Query: 139 RVLF-------------GTPEFIPPEIINYEPIGIESDMWSIGVITY 172
+ + GT ++ PE I+ + D++S+G+I +
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILF 221
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 101 bits (253), Expect = 5e-26
Identities = 19/142 (13%), Positives = 46/142 (32%), Gaps = 15/142 (10%)
Query: 40 ITGYVVEMKAGTQPWVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRN 99
+ P ++ + G L +L + Q+ + +H
Sbjct: 177 VLSRFFLY-----PRMQSNLQTFGEVLLSHSSTHK-SLVHHARLQLTLQVIRLLASLHHY 230
Query: 100 NIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRV--LFGTPEFIPPEIINYEP 157
+VH L+P +I+ + + + + F + + F PE ++ +
Sbjct: 231 GLVHTYLRPVDIV-LDQ-RGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQ 288
Query: 158 -----IGIESDMWSIGVITYVL 174
+ D W++G+ Y +
Sbjct: 289 HHPTLMTFAFDTWTLGLAIYWI 310
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 100 bits (250), Expect = 3e-25
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 59 ESIGGGELF---ERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVS 115
+ GG+L + F E V + +IC G++ +HR IV+ DLKPENI+
Sbjct: 264 TLMNGGDLKFHIYHMGQAGFP--EARAVFYAAEICCGLEDLHRERIVYRDLKPENILL-- 319
Query: 116 RTSH-HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
H HI+I D GLA + + GT ++ PE++ E D W++G + Y
Sbjct: 320 -DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLY 376
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 97.6 bits (243), Expect = 6e-25
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 15/107 (14%)
Query: 79 ERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPP 138
C+ QI E V+++H ++H DLKP NI +K+ DFGL ++ D
Sbjct: 163 HGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTM--DDVVKVGDFGLVTAMDQDEEE 220
Query: 139 RVLF-------------GTPEFIPPEIINYEPIGIESDMWSIGVITY 172
+ + GT ++ PE I+ + D++S+G+I +
Sbjct: 221 QTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILF 267
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 97.1 bits (242), Expect = 1e-24
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 63 GGELFERVVADDFT-LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHI 121
GG+LF+R+ A E + + QIC + ++H I+H D+K +NI +
Sbjct: 107 GGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK--DGTV 164
Query: 122 KIIDFGLAQKINPDHPPRVLF-GTPEFIPPEIINYEPIGIESDMWSIGVITY 172
++ DFG+A+ +N GTP ++ PEI +P +SD+W++G + Y
Sbjct: 165 QLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLY 216
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 95.0 bits (237), Expect = 2e-24
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 63 GGELFERVVA---DDFTLTERDCVLFLRQICEGVDYMHR-----NNIVHLDLKPENIMCV 114
GG+L + + L E + + Q+ + HR + ++H DLKP N+
Sbjct: 91 GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 150
Query: 115 SRTSHHIKIIDFGLAQKINPDHP-PRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYV 173
++K+ DFGLA+ +N D + GTP ++ PE +N +SD+WS+G + Y
Sbjct: 151 G--KQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
Query: 174 L 174
L
Sbjct: 209 L 209
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 96.8 bits (241), Expect = 6e-24
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 61 IGGGELF---ERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRT 117
+ GG++ V D+ E + + QI G++++H+ NI++ DLKPEN++
Sbjct: 267 MNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---D 323
Query: 118 SH-HIKIIDFGLA-QKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
+++I D GLA + + GTP F+ PE++ E D +++GV Y
Sbjct: 324 DDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 93.7 bits (233), Expect = 2e-23
Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 22/132 (16%)
Query: 63 GGELFERVV--ADDFTLTERDCVLFLRQICEGVDYMHRNN--IVHLDLKPENIMCVSRTS 118
G+L E + L+ + Q C V +MHR I+H DLK EN++ +
Sbjct: 117 KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSN--Q 174
Query: 119 HHIKIIDFGLAQKINPDHPPRVL-------------FGTPEFIPPEIIN---YEPIGIES 162
IK+ DFG A I+ TP + PEII+ PIG +
Sbjct: 175 GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQ 234
Query: 163 DMWSIGVITYVL 174
D+W++G I Y+L
Sbjct: 235 DIWALGCILYLL 246
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 94.4 bits (235), Expect = 2e-23
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
GG+L + + +L +I +D +HR VH D+KP+NI+ HI+
Sbjct: 145 GGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDR--CGHIR 202
Query: 123 IIDFGLAQKINPDHPPR--VLFGTPEFIPPEII-------NYEPIGIESDMWSIGVITY 172
+ DFG K+ D R V GTP+++ PEI+ G E D W++GV Y
Sbjct: 203 LADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAY 261
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 94.0 bits (234), Expect = 3e-23
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
GG+L + D E+ + ++ +D +H +H D+KP+N++ S H+K
Sbjct: 153 GGDLVNLMSNYDVP--EKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK--SGHLK 208
Query: 123 IIDFGLAQKINPDHPPR--VLFGTPEFIPPEIINYEPI----GIESDMWSIGVITY 172
+ DFG K+N + R GTP++I PE++ + G E D WS+GV Y
Sbjct: 209 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 264
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 94.1 bits (234), Expect = 3e-23
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
GG+L + + L E +L ++ +D +H+ + VH D+KP+NI+ + HI+
Sbjct: 158 GGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM--NGHIR 215
Query: 123 IIDFGLAQKINPDHPPR--VLFGTPEFIPPEIINYEPI-----GIESDMWSIGVITY 172
+ DFG K+ D + V GTP++I PEI+ G E D WS+GV Y
Sbjct: 216 LADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMY 272
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 92.3 bits (230), Expect = 6e-23
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + GG+L + L E + +I ++Y+H I++ DLK +N++ S
Sbjct: 90 EYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG- 147
Query: 119 HHIKIIDFGLA-QKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
HIK+ D+G+ + + P GTP +I PEI+ E G D W++GV+ +
Sbjct: 148 -HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 201
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 91.9 bits (229), Expect = 6e-23
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
GEL + + + E + +I ++Y+H I+H DLKPENI+
Sbjct: 110 SYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 165
Query: 119 H-HIKIIDFGLAQKINPDHPPRV----LFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
HI+I DFG A K+ + GT +++ PE++ + SD+W++G I Y
Sbjct: 166 DMHIQITDFGTA-KVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 223
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 92.8 bits (231), Expect = 6e-23
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + GG+L + L E + +I ++Y+H I++ DLK +N++ S
Sbjct: 133 EYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG- 190
Query: 119 HHIKIIDFGLA-QKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
HIK+ D+G+ + + P GTP +I PEI+ E G D W++GV+ +
Sbjct: 191 -HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 244
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 91.9 bits (229), Expect = 8e-23
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + GG+L + E V + +I G+ ++ I++ DLK +N+M S
Sbjct: 101 EYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG- 158
Query: 119 HHIKIIDFGLA-QKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
HIKI DFG+ + I + GTP++I PEII Y+P G D W+ GV+ Y
Sbjct: 159 -HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLY 212
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 91.9 bits (229), Expect = 9e-23
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + GG+L + E + +I + ++H I++ DLK +N++
Sbjct: 104 EFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEG- 161
Query: 119 HHIKIIDFGLA-QKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
H K+ DFG+ + I GTP++I PEI+ G D W++GV+ Y
Sbjct: 162 -HCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLY 215
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 93.4 bits (232), Expect = 9e-23
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 61 IGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH- 119
+ GG+L + +E D + +I G+++MH +V+ DLKP NI+ H
Sbjct: 274 MNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHG 329
Query: 120 HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINY-EPIGIESDMWSIGVITY 172
H++I D GLA P GT ++ PE++ +D +S+G + +
Sbjct: 330 HVRISDLGLA-CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 382
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 91.5 bits (228), Expect = 1e-22
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + GG+L + + + +I G+ ++H IV+ DLK +NI+
Sbjct: 98 EYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG- 155
Query: 119 HHIKIIDFGLA-QKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
HIKI DFG+ + + D GTP++I PEI+ + D WS GV+ Y
Sbjct: 156 -HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLY 209
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 92.8 bits (230), Expect = 1e-22
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + GG+L + E V + +I G+ ++ I++ DLK +N+M S
Sbjct: 422 EYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG- 479
Query: 119 HHIKIIDFGLA-QKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
HIKI DFG+ + I + GTP++I PEII Y+P G D W+ GV+ Y
Sbjct: 480 -HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLY 533
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 91.7 bits (228), Expect = 2e-22
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 85 FLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPP------ 138
F I + +D +H+N I+H DLKPENI+ + IK+IDFG + +
Sbjct: 205 FAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRF 264
Query: 139 -RVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVLYL 176
R PE+I G+ DMWS+G I L
Sbjct: 265 YR---------APEVILGARYGMPIDMWSLGCILAELLT 294
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 90.7 bits (226), Expect = 2e-22
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 14/120 (11%)
Query: 59 ESIGGGELF-----ERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMC 113
E GGELF ERV TE + +I ++Y+H ++V+ D+K EN+M
Sbjct: 85 EYANGGELFFHLSRERV------FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML 138
Query: 114 VSRTSHHIKIIDFGLA-QKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
HIKI DFGL + I+ + GTPE++ PE++ G D W +GV+ Y
Sbjct: 139 DK--DGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 91.2 bits (227), Expect = 2e-22
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 63 GGELF---ERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH 119
GG+L ++ V E LF+ ++ +DY+ I+H D+KP+NI+ H
Sbjct: 99 GGDLRYHLQQNV----HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL---DEH 151
Query: 120 -HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPI---GIESDMWSIGVITY 172
H+ I DF +A + + + GT ++ PE+ + D WS+GV Y
Sbjct: 152 GHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAY 208
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 90.1 bits (224), Expect = 3e-22
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 62 GGGELFERVVA---DDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
G+L + + ER + Q+C +++MH ++H D+KP N+ ++ +
Sbjct: 115 DAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVF-ITA-T 172
Query: 119 HHIKIIDFGLAQKINPDHP-PRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
+K+ D GL + + L GTP ++ PE I+ +SD+WS+G + Y
Sbjct: 173 GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLY 227
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 89.9 bits (224), Expect = 3e-22
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 61 IGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHH 120
+ GG+LF R+ + + TE D +L ++ +D++H I++ DLKPENI+ H
Sbjct: 108 LRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE--EGH 164
Query: 121 IKIIDFGLA-QKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
IK+ DFGL+ + I+ + GT E++ PE++N +D WS GV+ +
Sbjct: 165 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMF 217
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 89.5 bits (223), Expect = 4e-22
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 61 IGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHH 120
+ GGELF ++ + E +L +I + ++H+ I++ DLKPENIM + H
Sbjct: 103 LSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG--H 159
Query: 121 IKIIDFGLA-QKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
+K+ DFGL + I+ GT E++ PEI+ D WS+G + Y
Sbjct: 160 VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMY 212
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 90.4 bits (225), Expect = 5e-22
Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 16/119 (13%)
Query: 61 IGGGELF-----ERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVS 115
I GGELF ER E + +I + Y+H NIV+ DLKPENI+
Sbjct: 121 INGGELFYHLQRERC------FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL-- 172
Query: 116 RTSH-HIKIIDFGLA-QKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
S HI + DFGL + I + GTPE++ PE+++ +P D W +G + Y
Sbjct: 173 -DSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLY 230
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 91.1 bits (226), Expect = 5e-22
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E +GG L L + + +L +I + Y+H +V+ DLKPENIM T
Sbjct: 164 EYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIM---LTE 217
Query: 119 HHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
+K+ID G +IN L+GTP F PEI+ P + +D++++G L
Sbjct: 218 EQLKLIDLGAVSRINSFGY---LYGTPGFQAPEIVRTGPT-VATDIYTVGRTLAAL 269
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 87.5 bits (217), Expect = 7e-21
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMH-RNNIVHLDLKPENIMCVSRT 117
E GGELF + + +E + +I +DY+H N+V+ DLK EN+M
Sbjct: 228 EYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK-- 284
Query: 118 SHHIKIIDFGLA-QKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
HIKI DFGL + I + GTPE++ PE++ G D W +GV+ Y
Sbjct: 285 DGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 340
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 86.2 bits (214), Expect = 1e-20
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + GGE+F + +E + QI +Y+H ++++ DLKPEN++ +
Sbjct: 121 EYVAGGEMF-SHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG- 178
Query: 119 HHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
+I++ DFG A+++ L GTPE + PEII + D W++GV+ Y
Sbjct: 179 -YIQVTDFGFAKRV--KGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIY 229
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 84.9 bits (211), Expect = 2e-20
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 61 IGGGELF-----ERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVS 115
I GGELF + + ++C ++Y+H +I++ DLKPENI+
Sbjct: 88 IEGGELFSLLRKSQ------RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDK 141
Query: 116 RTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
HIKI DFG A K PD L GTP++I PE+++ +P D WS G++ Y
Sbjct: 142 NG--HIKITDFGFA-KYVPDV-TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIY 194
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 84.8 bits (210), Expect = 3e-20
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
L E + +L Q EG++Y+H I+H D+K +N++ +S + DFG A + PD
Sbjct: 146 CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVL-LSSDGSRAALCDFGHALCLQPD 204
Query: 136 HPPRVLF------GTPEFIPPEIINYEPIGIESDMWSIG 168
+ L GT + PE++ +P + D+WS
Sbjct: 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC 243
Score = 26.6 bits (59), Expect = 5.0
Identities = 13/75 (17%), Positives = 22/75 (29%), Gaps = 18/75 (24%)
Query: 29 WSSPPYDGGCMITGYVVEMKAGTQPWVELSE-----SIGGGELFERVVADDFTLTERDCV 83
WSS CM ++ M G PW + I R +
Sbjct: 240 WSS-----CCM----MLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQ-- 288
Query: 84 LFLRQICEGVDYMHR 98
+++ + +HR
Sbjct: 289 -AIQE-GLRKEPVHR 301
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 84.6 bits (210), Expect = 5e-20
Identities = 36/117 (30%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Query: 61 IGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH- 119
I GGELF + + TE + +++ +I ++++H+ I++ D+K ENI+ S+
Sbjct: 141 INGGELFTHL-SQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNG 196
Query: 120 HIKIIDFGLAQKINPDHPPRV--LFGTPEFIPPEIINYEPIGIES--DMWSIGVITY 172
H+ + DFGL+++ D R GT E++ P+I+ G + D WS+GV+ Y
Sbjct: 197 HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMY 253
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 84.2 bits (209), Expect = 5e-20
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 66 LFERVVADDF-----TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHH 120
+FE V DF TLT+ D ++ +I + +DY H I+H D+KP N+M +
Sbjct: 111 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK 169
Query: 121 IKIIDFGLAQKINPDHPPRVLFGTPEFIPPEII-NYEPIGIESDMWSIGVI 170
+++ID+GLA+ +P V + F PE++ +Y+ DMWS+G +
Sbjct: 170 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 220
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 83.5 bits (207), Expect = 5e-20
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 75 FTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINP 134
E+ + +QI EG+ Y+H N IVH D+K +N++ ++ S +KI DFG ++++
Sbjct: 117 LKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVL-INTYSGVLKISDFGTSKRLAG 175
Query: 135 DHPPRVLF-GTPEFIPPEIINYEPIG--IESDMWSIG 168
+P F GT +++ PEII+ P G +D+WS+G
Sbjct: 176 INPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLG 212
Score = 25.7 bits (57), Expect = 8.8
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 11/41 (26%)
Query: 26 VITWSSPPYDG-------GCMITGYVVEMKAGTQPWVELSE 59
+I Y GC ++EM G P+ EL E
Sbjct: 194 IIDKGPRGYGKAADIWSLGCT----IIEMATGKPPFYELGE 230
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 84.4 bits (209), Expect = 6e-20
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 18/101 (17%)
Query: 85 FLRQICEGVDYMHRN--NIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPP---- 138
F +Q+C + ++ +I+H DLKPENI+ + IKI+DFG + ++
Sbjct: 162 FAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQS 221
Query: 139 ---RVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVLYL 176
R PE++ P + DMWS+G I ++
Sbjct: 222 RFYR---------SPEVLLGMPYDLAIDMWSLGCILVEMHT 253
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 84.4 bits (209), Expect = 7e-20
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 85 FLRQICEGVDYMHRN-NIVHLDLKPENIM----CVSRTSHHIKIIDFGLAQKINPDHPPR 139
+Q+ G+DYMHR I+H D+KPEN++ IKI D G A + +
Sbjct: 136 ISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNS 195
Query: 140 VLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVLYL 176
+ T E+ PE++ P G +D+WS + + L
Sbjct: 196 I--QTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 80.8 bits (200), Expect = 5e-19
Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 21/116 (18%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIM-----------------CVSRTSH 119
E + L Q+ G+ Y+H ++VH+D+KP NI +
Sbjct: 112 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171
Query: 120 HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYE-PIGIESDMWSIGVITYVL 174
KI D G +I+ P+V G F+ E++ ++D++++ +
Sbjct: 172 MFKIGDLGHVTRIS---SPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCA 224
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 80.0 bits (198), Expect = 1e-18
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E I G L E + L+ + F QI +G+ + H IVH D+KP+NI+ +
Sbjct: 91 EYIEGPTLSE-YIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNIL-IDSN- 147
Query: 119 HHIKIIDFGLAQKINPDH--PPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
+KI DFG+A+ ++ + GT ++ PE E +D++SIG++ Y
Sbjct: 148 KTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLY 203
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 80.1 bits (198), Expect = 2e-18
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 17/127 (13%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E I GG L + + D V F + I G+ Y+H NI+H DL N C+ R +
Sbjct: 87 EYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHN--CLVREN 144
Query: 119 HHIKIIDFGLA---------------QKINPDHPPRVLFGTPEFIPPEIINYEPIGIESD 163
++ + DFGLA K + G P ++ PE+IN + D
Sbjct: 145 KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVD 204
Query: 164 MWSIGVI 170
++S G++
Sbjct: 205 VFSFGIV 211
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 79.9 bits (198), Expect = 2e-18
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDH 136
+ E Q + V++ H++N +H D+KPENI+ + IK+ DFG A+ +
Sbjct: 99 VPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHS--VIKLCDFGFARLLTG-- 154
Query: 137 PPRVLFGTPEFI-----PPEII----NYEPIGIESDMWSIGVI 170
P E PE++ Y P + D+W+IG +
Sbjct: 155 PSDYY--DDEVATRWYRSPELLVGDTQYGP-PV--DVWAIGCV 192
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 78.9 bits (195), Expect = 3e-18
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNN--IVHLDLKPENIMCVSRTSHHIKIIDFGLAQKIN 133
+ + + RQI +G+ ++H I+H DLK +NI ++ + +KI D GLA
Sbjct: 125 VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIF-ITGPTGSVKIGDLGLATLKR 183
Query: 134 PDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIG 168
V+ GTPEF+ PE+ E D+++ G
Sbjct: 184 ASFAKAVI-GTPEFMAPEMYE-EKYDESVDVYAFG 216
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 79.2 bits (196), Expect = 3e-18
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 18/103 (17%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDH 136
L + +L QI G+ + H +NI+H D+KPENI+ +K+ DFG A+ +
Sbjct: 121 LDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSG--VVKLCDFGFARTLAA-- 176
Query: 137 PPRVLFGTPEFI-----PPEII----NYEPIGIESDMWSIGVI 170
P V E PE++ Y + D+W+IG +
Sbjct: 177 PGEVY--DDEVATRWYRAPELLVGDVKYGK-AV--DVWAIGCL 214
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 79.3 bits (196), Expect = 3e-18
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 43 YVVEMKA----GTQPWVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHR 98
VVEM G + WV L E + GG L + + L E + + + Y+H
Sbjct: 103 NVVEMYKSYLVGEELWV-LMEFLQGGALTD--IVSQVRLNEEQIATVCEAVLQALAYLHA 159
Query: 99 NNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF-GTPEFIPPEIINYEP 157
++H D+K ++I+ +K+ DFG +I+ D P R GTP ++ PE+I+
Sbjct: 160 QGVIHRDIKSDSILL--TLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSL 217
Query: 158 IGIESDMWSIGVIT 171
E D+WS+G I
Sbjct: 218 YATEVDIWSLG-IM 230
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 78.8 bits (195), Expect = 3e-18
Identities = 31/113 (27%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 64 GELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKI 123
G +V + +T + + + C+ +++ H+N I+H D+KP NIM +S T + +K+
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIM-ISAT-NAVKV 157
Query: 124 IDFGLAQKINPDHPP----RVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
+DFG+A+ I + GT +++ PE + + SD++S+G + Y
Sbjct: 158 MDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 77.3 bits (191), Expect = 1e-17
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 11/134 (8%)
Query: 43 YVVEMKA----GTQPWVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHR 98
+V G + WV + E + GG L + V + + E R+ + ++++H
Sbjct: 78 NIVNYLDSYLVGDELWV-VMEYLAGGSLTD--VVTETCMDEGQIAAVCRECLQALEFLHS 134
Query: 99 NNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF-GTPEFIPPEIINYEP 157
N ++H D+K +NI+ +K+ DFG +I P+ R GTP ++ PE++ +
Sbjct: 135 NQVIHRDIKSDNILL--GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 192
Query: 158 IGIESDMWSIGVIT 171
G + D+WS+G I
Sbjct: 193 YGPKVDIWSLG-IM 205
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 78.3 bits (193), Expect = 1e-17
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 85 FLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHH--IKIIDFGLAQKINPDHPPRVLF 142
L QI +G+ Y+H N ++H DLKP NI+ + +KI D G A+ N P + L
Sbjct: 133 LLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS--PLKPLA 190
Query: 143 -GTPEFI-----PPEII----NYEPIGIESDMWSIGVI 170
P + PE++ +Y I D+W+IG I
Sbjct: 191 DLDPVVVTFWYRAPELLLGARHYTK-AI--DIWAIGCI 225
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 77.8 bits (192), Expect = 1e-17
Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 33/116 (28%)
Query: 85 FLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHH-----------------IKIIDFG 127
Q+C + ++H N + H DLKPENI+ V+ I++ DFG
Sbjct: 128 MAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG 187
Query: 128 LAQKINPDHPP-------RVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVLYL 176
A + H R PPE+I D+WSIG I + Y
Sbjct: 188 SATFDHEHHTTIVATRHYR---------PPEVILELGWAQPCDVWSIGCILFEYYR 234
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 77.3 bits (191), Expect = 1e-17
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
G L+ + A + + + RQ G+DY+H +I+H DLK NI + +K
Sbjct: 103 GSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIF--LHEDNTVK 160
Query: 123 IIDFGLAQKINPDHPPRVL---FGTPEFIPPEIINYE---PIGIESDMWSIGVITY 172
I DFGLA + + G+ ++ PE+I + P +SD+++ G++ Y
Sbjct: 161 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 216
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 77.7 bits (192), Expect = 1e-17
Identities = 34/116 (29%), Positives = 46/116 (39%), Gaps = 33/116 (28%)
Query: 85 FLRQICEGVDYMHRNNIVHLDLKPENIMCVSRT-----------------SHHIKIIDFG 127
QIC+ V+++H N + H DLKPENI+ V + IK++DFG
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182
Query: 128 LAQKINPDHPP-------RVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVLYL 176
A + H R PE+I D+WSIG I YL
Sbjct: 183 SATYDDEHHSTLVSTRHYR---------APEVILALGWSQPCDVWSIGCILIEYYL 229
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 77.0 bits (190), Expect = 2e-17
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 77 LTERDCVLFLRQICEGVDYMHR---NNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKIN 133
T + + Q +GV Y+H ++H DLKP N++ + +KI DFG A I
Sbjct: 99 YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL-LVAGGTVLKICDFGTACDIQ 157
Query: 134 PDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVI 170
G+ ++ PE+ + D++S G+I
Sbjct: 158 THMTNNK--GSAAWMAPEVFEGSNYSEKCDVFSWGII 192
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 76.5 bits (189), Expect = 3e-17
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Query: 64 GELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKI 123
G ++ L V +RQI +D H H D+KPENI+ VS +
Sbjct: 118 GVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENIL-VSAD-DFAYL 175
Query: 124 IDFGLAQKINPDHPPR--VLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
+DFG+A + + GT ++ PE + +D++++ + Y
Sbjct: 176 VDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLY 226
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 76.2 bits (188), Expect = 3e-17
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
G L++ + + + RQ +G+DY+H NI+H D+K NI + +K
Sbjct: 115 GSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIF-LHE-GLTVK 172
Query: 123 IIDFGLA---QKINPDHPPRVLFGTPEFIPPEIINYE---PIGIESDMWSIGVITY 172
I DFGLA + + G+ ++ PE+I + P +SD++S G++ Y
Sbjct: 173 IGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLY 228
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 76.2 bits (188), Expect = 3e-17
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 50 GTQPWVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPE 109
T W+ + E G G + + + + TLTE + L+ +G++Y+H +H D+K
Sbjct: 96 NTDLWI-VMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAG 154
Query: 110 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF-GTPEFIPPEIINYEPIGIESDMWSIG 168
NI+ + H K+ DFG+A ++ R GTP ++ PE+I +D+WS+G
Sbjct: 155 NILLNTEG--HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLG 212
Query: 169 VIT 171
IT
Sbjct: 213 -IT 214
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 76.6 bits (189), Expect = 3e-17
Identities = 31/122 (25%), Positives = 46/122 (37%), Gaps = 39/122 (31%)
Query: 85 FLRQICEGVDYMHRNNIVHLDLKPENIMCVS-----------------------RTSHHI 121
+ +I + ++Y+ + ++ H DLKPENI+ S I
Sbjct: 142 YCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGI 201
Query: 122 KIIDFGLAQKINPDHPP-------RVLFGTPEFIPPEIINYEPIGIESDMWSIGVITYVL 174
K+IDFG A + H R PE+I + SDMWS G + L
Sbjct: 202 KLIDFGCATFKSDYHGSIINTRQYR---------APEVILNLGWDVSSDMWSFGCVLAEL 252
Query: 175 YL 176
Y
Sbjct: 253 YT 254
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 76.2 bits (188), Expect = 3e-17
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 63 GGELFE--RVVADDFTLTERDCVLFLRQICEGVDYMHRNN--IVHLDLKPENIMCVSRTS 118
G L+ L ER + + +G++Y+H N IVH +LK N++ +
Sbjct: 118 RGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKK-- 175
Query: 119 HHIKIIDFGLAQ-KINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVI 170
+ +K+ DFGL++ K + + GTPE++ PE++ EP +SD++S GVI
Sbjct: 176 YTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVI 228
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 76.5 bits (189), Expect = 4e-17
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 16/105 (15%)
Query: 75 FTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINP 134
FTL+E ++ + G+ Y+HRN I+H D+K N++ ++R +K+ DFGLA+ +
Sbjct: 121 FTLSEIKR--VMQMLLNGLYYIHRNKILHRDMKAANVL-ITRD-GVLKLADFGLARAFSL 176
Query: 135 DHPPRVLFGTPEFI-----PPEII----NYEPIGIESDMWSIGVI 170
+ T + PPE++ +Y P I D+W G I
Sbjct: 177 AKNSQPNRYTNRVVTLWYRPPELLLGERDYGP-PI--DLWGAGCI 218
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 76.6 bits (189), Expect = 4e-17
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 24/107 (22%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
T+ L++ Q+ + Y+H I H D+KP+N+ + S +K+IDFG A+ +
Sbjct: 137 TMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNL-LLDPPSGVLKLIDFGSAKILIAG 195
Query: 136 HP------------PRVLFGTPEFIPPEIINYEPIGIESDMWSIGVI 170
P P ++FG + I D+WS G +
Sbjct: 196 EPNVSYICSRYYRAPELIFGATNYTTN-I----------DIWSTGCV 231
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 74.7 bits (184), Expect = 1e-16
Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 18/125 (14%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
G L+ V L ++I +G+ Y+H I+H DLK +N+ + +
Sbjct: 113 GRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY---DNGKVV 169
Query: 123 IIDFGLA------QKINPDHPPRVLFGTPEFIPPEII---------NYEPIGIESDMWSI 167
I DFGL Q + R+ G + PEII + P SD++++
Sbjct: 170 ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFAL 229
Query: 168 GVITY 172
G I Y
Sbjct: 230 GTIWY 234
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 75.1 bits (185), Expect = 2e-16
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
TL L++ Q+ + Y+H I H D+KP+N+ + + +K+ DFG A+++
Sbjct: 152 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL-LLDPDTAVLKLCDFGSAKQLVRG 210
Query: 136 HPPRVLFGTPEFI------PPEII----NY-EPIGIESDMWSIGVI 170
P +I PE+I +Y I D+WS G +
Sbjct: 211 EPNV------SYICSRYYRAPELIFGATDYTSSI----DVWSAGCV 246
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 74.1 bits (183), Expect = 2e-16
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 18/95 (18%)
Query: 85 FLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGT 144
+L Q+ +G+ + H + ++H DLKP+N++ ++ IK+ DFGLA+ P R T
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLL-INTEG-AIKLADFGLARAFGV--PVRTY--T 161
Query: 145 PEFI-----PPEII----NYEPIGIESDMWSIGVI 170
E + PEI+ Y + D+WS+G I
Sbjct: 162 HEVVTLWYRAPEILLGAKYYST-AV--DIWSLGCI 193
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 74.1 bits (183), Expect = 2e-16
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 18/103 (17%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDH 136
L FL Q+ +G+ + H N++H DLKP+N++ ++R +K+ +FGLA+
Sbjct: 98 LDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLL-INRNG-ELKLANFGLARAFGI-- 153
Query: 137 PPRVLFGTPEFI-----PPEII----NYEPIGIESDMWSIGVI 170
P R + E + PP+++ Y DMWS G I
Sbjct: 154 PVRCY--SAEVVTLWYRPPDVLFGAKLY---STSIDMWSAGCI 191
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 73.5 bits (181), Expect = 2e-16
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNN---IVHLDLKPENI------MCVSRTSHHIKIIDFG 127
+ V + QI G++Y+H I+H DLK NI ++ +KI DFG
Sbjct: 102 IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161
Query: 128 LAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVI 170
LA++ + G ++ PE+I SD+WS GV+
Sbjct: 162 LAREWHRTTKMSAA-GAYAWMAPEVIRASMFSKGSDVWSYGVL 203
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 74.1 bits (183), Expect = 2e-16
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 18/103 (17%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDH 136
L + ++L Q+ GV + H++ I+H DLKP+N++ ++ +K+ DFGLA+
Sbjct: 116 LQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLL-INSDG-ALKLADFGLARAFGI-- 171
Query: 137 PPRVLFGTPEFI-----PPEII----NYEPIGIESDMWSIGVI 170
P R T E + P+++ Y + D+WSIG I
Sbjct: 172 PVRSY--THEVVTLWYRAPDVLMGSKKYST-SV--DIWSIGCI 209
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 72.9 bits (180), Expect = 4e-16
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 18/103 (17%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDH 136
L FL Q+ G+ Y H ++H DLKP+N++ ++R +KI DFGLA+
Sbjct: 97 LESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLL-INREG-ELKIADFGLARAFGI-- 152
Query: 137 PPRVLFGTPEFI-----PPEII----NYEPIGIESDMWSIGVI 170
P R T E + P+++ Y I D+WS+G I
Sbjct: 153 PVRKY--THEIVTLWYRAPDVLMGSKKYST-TI--DIWSVGCI 190
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 73.0 bits (180), Expect = 6e-16
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 18/94 (19%)
Query: 85 FLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGT 144
+ Q+ G+D++H + +VH DLKP+NI+ V+ + IK+ DFGLA+ + T
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNIL-VTSSG-QIKLADFGLARIY--SFQMAL---T 177
Query: 145 PEFI-----PPEII---NYEPIGIESDMWSIGVI 170
+ PE++ +Y + D+WS+G I
Sbjct: 178 SVVVTLWYRAPEVLLQSSYAT-PV--DLWSVGCI 208
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 72.6 bits (179), Expect = 6e-16
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 18/103 (17%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDH 136
+ + LFL Q+ G+ Y HR ++H DLKP+N++ R +K+ DFGLA+ +
Sbjct: 97 INMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERG--ELKLADFGLARAKSI-- 152
Query: 137 PPRVLFGTPEFI-----PPEII----NYEPIGIESDMWSIGVI 170
P + E + PP+I+ +Y I DMW +G I
Sbjct: 153 PTKTY--DNEVVTLWYRPPDILLGSTDYST-QI--DMWGVGCI 190
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 72.7 bits (179), Expect = 7e-16
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHH---IKIIDFGLAQKIN 133
++ R FL Q+ GV++ H +H DLKP+N++ + +KI DFGLA+
Sbjct: 129 VSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188
Query: 134 PDHPPRVLFGTPEFI-----PPEII----NYEPIGIESDMWSIGVI 170
P R T E I PPEI+ +Y D+WSI I
Sbjct: 189 I--PIRQF--THEIITLWYRPPEILLGSRHY---STSVDIWSIACI 227
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 72.6 bits (179), Expect = 8e-16
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 18/94 (19%)
Query: 85 FLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGT 144
+RQ G+D++H N IVH DLKPENI+ S +K+ DFGLA+ + + T
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGG--TVKLADFGLARIY--SYQMAL---T 177
Query: 145 PEFI-----PPEII---NYEPIGIESDMWSIGVI 170
P + PE++ Y + DMWS+G I
Sbjct: 178 PVVVTLWYRAPEVLLQSTYAT-PV--DMWSVGCI 208
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 72.2 bits (178), Expect = 8e-16
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 85 FLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGT 144
F Q+ +G+ + H N I+H DLKP+N++ R +K+ DFGLA+ P +
Sbjct: 113 FQWQLLQGLAFCHENKILHRDLKPQNLLINKRG--QLKLGDFGLARAFGI--PVNTF--S 166
Query: 145 PEFI-----PPEII----NYEPIGIESDMWSIGVI 170
E + P+++ Y I D+WS G I
Sbjct: 167 SEVVTLWYRAPDVLMGSRTYST-SI--DIWSCGCI 198
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 72.2 bits (178), Expect = 1e-15
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 18/103 (17%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDH 136
LT ++ +G++Y+H++ I+H DLKP N++ + +K+ DFGLA+
Sbjct: 109 LTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLL-LDENG-VLKLADFGLAKSFGS-- 164
Query: 137 PPRVLFGTPEFI-----PPEII----NYEPIGIESDMWSIGVI 170
P R T + + PE++ Y G+ DMW++G I
Sbjct: 165 PNRAY--THQVVTRWYRAPELLFGARMYGV-GV--DMWAVGCI 202
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 72.0 bits (177), Expect = 1e-15
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 40 ITGYVVEMKAGTQPWVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRN 99
I + + W+ + E GG + ++ D LTE + RQ+ E ++++H
Sbjct: 78 IVKLLGAYYHDGKLWI-MIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 100 NIVHLDLKPENIMCVSRTSH-HIKIIDFGLAQKINPDHPPRVLF-GTPEFIPPEIINYEP 157
I+H DLK N++ T I++ DFG++ K R F GTP ++ PE++ E
Sbjct: 137 RIIHRDLKAGNVLM---TLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCET 193
Query: 158 I-----GIESDMWSIGVIT 171
+ ++D+WS+G IT
Sbjct: 194 MKDTPYDYKADIWSLG-IT 211
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 72.5 bits (178), Expect = 1e-15
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 20/105 (19%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
++ +++ Q+ V ++H I H D+KP+N+ V+ + +K+ DFG A+K+ P
Sbjct: 137 SIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNL-LVNSKDNTLKLCDFGSAKKLIPS 195
Query: 136 HPPRVLFGTPEFI------PPEII----NYEPIGIESDMWSIGVI 170
P + +I PE++ Y P I D+WSIG +
Sbjct: 196 EP------SVAYICSRFYRAPELMLGATEYTP-SI--DLWSIGCV 231
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 70.8 bits (174), Expect = 2e-15
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNN--IVHLDLKPENIMCVSRTSH- 119
G+L+ R++ + + + I G++YM N IVH DL+ NI S +
Sbjct: 105 CGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENA 164
Query: 120 --HIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYE--PIGIESDMWSIGVI 170
K+ DFGL+Q+ + G +++ PE I E ++D +S +I
Sbjct: 165 PVCAKVADFGLSQQSVHSVSGLL--GNFQWMAPETIGAEEESYTEKADTYSFAMI 217
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 71.2 bits (175), Expect = 3e-15
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 13/99 (13%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIM----CVSRTSHHIKIIDFGLAQKI 132
L E + Q+ +G+ Y+H I+H DLKP N+ C +KI+DFGLA++
Sbjct: 125 LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC------ELKILDFGLARQA 178
Query: 133 NPDHPPRVLFGTPEFIPPEII-NYEPIGIESDMWSIGVI 170
+ + V T + PE+I N+ D+WS+G I
Sbjct: 179 DSEMTGYV--VTRWYRAPEVILNWMRYTQTVDIWSVGCI 215
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 70.4 bits (173), Expect = 6e-15
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 24/108 (22%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRN--NIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKIN 133
+FL Q+ + +H N+ H D+KP N+ V+ +K+ DFG A+K++
Sbjct: 125 APPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNV-LVNEADGTLKLCDFGSAKKLS 183
Query: 134 PDHPPRVLFGTPEFI------PPEII----NY-EPIGIESDMWSIGVI 170
P P +I PE+I +Y + D+WS+G I
Sbjct: 184 PSEP------NVAYICSRYYRAPELIFGNQHYTTAV----DIWSVGCI 221
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 68.8 bits (169), Expect = 1e-14
Identities = 25/151 (16%), Positives = 47/151 (31%), Gaps = 39/151 (25%)
Query: 31 SPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGELFERV-VADDFTLTERDCVLFLRQI 89
SPP +IT ++ G L+ + +F + + V F +
Sbjct: 78 SPPAPHPTLITHWMP-----------------YGSLYNVLHEGTNFVVDQSQAVKFALDM 120
Query: 90 CEGVDYMH--RNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF----- 142
G+ ++H I L ++M +I +
Sbjct: 121 ARGMAFLHTLEPLIPRHALNSRSVMIDED--MTARISMADVK---------FSFQSPGRM 169
Query: 143 GTPEFIPPEIINYEPIGIE---SDMWSIGVI 170
P ++ PE + +P +DMWS V+
Sbjct: 170 YAPAWVAPEALQKKPEDTNRRSADMWSFAVL 200
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 69.2 bits (170), Expect = 1e-14
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIM----CVSRTSHHIKIIDFGLAQKI 132
+E + Q+ +G+ Y+H +VH DLKP N+ C +KI+DFGLA+
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC------ELKILDFGLARHA 176
Query: 133 NPDHPPRVLFGTPEFIPPEII-NYEPIGIESDMWSIGVI 170
+ + V T + PE+I ++ D+WS+G I
Sbjct: 177 DAEMTGYV--VTRWYRAPEVILSWMHYNQTVDIWSVGCI 213
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 69.2 bits (170), Expect = 2e-14
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 22/110 (20%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIM----CVSRTSHHIKIIDFGLAQKI 132
L++ F+ Q V +H +N++H DLKP N++ C +K+ DFGLA+ I
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC------DLKVCDFGLARII 162
Query: 133 NPDHPPRVLFGTPEFI-----------PPEII-NYEPIGIESDMWSIGVI 170
+ + PE++ D+WS G I
Sbjct: 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCI 212
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 68.8 bits (169), Expect = 2e-14
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
L E LF+ Q+ G+ Y+H N++H DLKP N+ ++ +KI DFGLA+ ++P
Sbjct: 116 PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLF-INTEDLVLKIGDFGLARIMDPH 174
Query: 136 HPPRVLFGTPEFI-----PPEII-NYEPIGIESDMWSIGVI 170
+ + + + P ++ + DMW+ G I
Sbjct: 175 YSHKG-HLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCI 214
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 69.3 bits (170), Expect = 2e-14
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIM----CVSRTSHHIKIIDFGLAQKI 132
LT+ + QI G+ Y+H +I+H DLKP N+ C +KI+DFGLA+
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC------ELKILDFGLARHT 182
Query: 133 NPDHPPRVLFGTPEFIPPEII-NYEPIGIESDMWSIGVI 170
+ V T + PEI+ N+ D+WS+G I
Sbjct: 183 ADEMTGYV--ATRWYRAPEIMLNWMHYNQTVDIWSVGCI 219
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 68.9 bits (169), Expect = 2e-14
Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 23/110 (20%)
Query: 72 ADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIM----CVSRTSHHIKIIDFG 127
++ + F+ I G+ +H +VH DL P NI+ I I DF
Sbjct: 126 DQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNN------DITICDFN 179
Query: 128 LAQKINPDHPPRVLFGTPEFI------PPEII-NYEPIGIESDMWSIGVI 170
LA++ D ++ PE++ ++ DMWS G +
Sbjct: 180 LAREDTADAN------KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCV 223
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 68.1 bits (167), Expect = 2e-14
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Query: 64 GELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKI 123
G L + + + + + QIC+G++Y+ +H DL NI+ V + +KI
Sbjct: 98 GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL-VE-NENRVKI 155
Query: 124 IDFGLAQKINPDHPP-RVLFGT--PEF-IPPEIINYEPIGIESDMWSIGVITY 172
DFGL + + D +V P F PE + + SD+WS GV+ Y
Sbjct: 156 GDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 208
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 68.8 bits (169), Expect = 2e-14
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 19/105 (18%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIM----CVSRTSHHIKIIDFGLAQKI 132
L+ FL QI G+ Y+H N++H DLKP N++ C +KI DFGLA+
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC------DLKICDFGLARVA 178
Query: 133 NPDHPPRVLFGTPEFI------PPEII-NYEPIGIESDMWSIGVI 170
+PDH F T E++ PEI+ N + D+WS+G I
Sbjct: 179 DPDHDHTG-FLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI 221
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 69.0 bits (169), Expect = 2e-14
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
++ + QI ++Y+ + N +H +L N + V H +K+ DFGL++ + D
Sbjct: 314 EVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCL-VGEN-HLVKVADFGLSRLMTGD 371
Query: 136 -HPPRVLFGTP-EFIPPEIINYEPIGIESDMWSIGVITY 172
+ P ++ PE + Y I+SD+W+ GV+ +
Sbjct: 372 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 410
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 68.2 bits (167), Expect = 3e-14
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 47 MKAGTQPWVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDL 106
AG + + E + G L + + + + + QIC+G++Y+ +H DL
Sbjct: 112 YSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDL 171
Query: 107 KPENIMCVSRTSHHIKIIDFGLAQKINPDHPP-RVLFGT--PEF-IPPEIINYEPIGIES 162
NI+ V + +KI DFGL + + D +V P F PE + + S
Sbjct: 172 ATRNIL-VE-NENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVAS 229
Query: 163 DMWSIGVITY 172
D+WS GV+ Y
Sbjct: 230 DVWSFGVVLY 239
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 67.3 bits (165), Expect = 6e-14
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 47 MKAGTQPWVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDL 106
+ G + E + G L E + + + + + + QIC+G+DY+ VH DL
Sbjct: 93 TEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDL 152
Query: 107 KPENIMCVSRTSHHIKIIDFGLAQKINPDHPP-RVLFGT--PEF-IPPEIINYEPIGIES 162
N++ V + H +KI DFGL + I D V P F PE + I S
Sbjct: 153 AARNVL-VE-SEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIAS 210
Query: 163 DMWSIGVITY 172
D+WS GV +
Sbjct: 211 DVWSFGVTLH 220
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 67.0 bits (164), Expect = 7e-14
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
L E LR+I +G+DY+H +H D+K N++ +S +K+ DFG+A ++
Sbjct: 115 PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVL-LSEHG-EVKLADFGVAGQLTDT 172
Query: 136 HPPRVLF-GTPEFIPPEIINYEPIGIESDMWSIGVIT 171
R F GTP ++ PE+I ++D+WS+G IT
Sbjct: 173 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLG-IT 208
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 66.9 bits (164), Expect = 8e-14
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
G L + V + + + + QI +G++Y+ +VH DL N++ V T H+K
Sbjct: 100 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL-VK-TPQHVK 157
Query: 123 IIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
I DFGLA+ + + G +P E I + +SD+WS GV
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESILHRIYTHQSDVWSYGV 207
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 67.1 bits (164), Expect = 9e-14
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 42/126 (33%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIM----CVSRTSHHIKIIDFGLAQKI 132
LTE L + G +++H + I+H DLKP N + C +K+ DFGLA+ I
Sbjct: 126 LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDC------SVKVCDFGLARTI 179
Query: 133 NPDHPPRVLFGTPEFIP-----------------------PEII----NY-EPIGIESDM 164
N + ++ E PE+I NY + I D+
Sbjct: 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSI----DI 235
Query: 165 WSIGVI 170
WS G I
Sbjct: 236 WSTGCI 241
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 66.3 bits (162), Expect = 2e-13
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 26/106 (24%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIM----CVSRTSHHIKIIDFGLAQKI 132
L L Q+ G+ ++H I+H DLKP NI+ C +KI+DFGLA+
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC------TLKILDFGLARTA 177
Query: 133 NPDHPPRVLFGTPE-----FIPPEII---NYEPIGIESDMWSIGVI 170
TP + PE+I Y+ D+WS+G I
Sbjct: 178 GTSF-----MMTPYVVTRYYRAPEVILGMGYKE---NVDIWSVGCI 215
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 65.8 bits (161), Expect = 2e-13
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
G L + + L +L+ QIC+G++Y+ VH DL NI+ V + H+K
Sbjct: 110 SGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL-VE-SEAHVK 167
Query: 123 IIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITYVLY 175
I DFGLA+ + D V+ P P PE ++ +SD+WS GV VLY
Sbjct: 168 IADFGLAKLLPLDKDYYVV-REPGQSPIFWYAPESLSDNIFSRQSDVWSFGV---VLY 221
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 65.0 bits (159), Expect = 3e-13
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
G L + V + + + + QI +G++Y+ +VH DL N++ V T H+K
Sbjct: 100 FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL-VK-TPQHVK 157
Query: 123 IIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
I DFGLA+ + + G +P E I + +SD+WS GV
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESILHRIYTHQSDVWSYGV 207
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3;
transferase, pseudo kinase domain, vaccinia related
kinase, ATP-binding; 2.00A {Homo sapiens}
Length = 352
Score = 65.1 bits (159), Expect = 4e-13
Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 23/123 (18%)
Query: 65 ELFERVVADDFTLTERDCVLFL-RQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKI 123
+ + VL + ++ + ++++H N VH ++ ENI + +
Sbjct: 146 SALDVSPKHVLSER---SVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTL 202
Query: 124 IDFGLAQKINPDH--------PPRVLFGTPEFIPPEIINYEPIGIE----SDMWSIGVIT 171
+G A + P G EFI ++ G SD+ S+G
Sbjct: 203 AGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFIS---MDLH-KGCGPSRRSDLQSLG--- 255
Query: 172 YVL 174
Y +
Sbjct: 256 YCM 258
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 65.1 bits (159), Expect = 4e-13
Identities = 30/103 (29%), Positives = 58/103 (56%), Gaps = 11/103 (10%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH-HIKIIDFGLAQKINP 134
TL E R+I G+ ++H++ ++H D+K +N++ T + +K++DFG++ +++
Sbjct: 125 TLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDR 181
Query: 135 DHPPRVLF-GTPEFIPPEIINYEPIGIES-----DMWSIGVIT 171
R F GTP ++ PE+I + + D+WS+G IT
Sbjct: 182 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG-IT 223
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 65.2 bits (159), Expect = 4e-13
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
L V QI G+ Y+ R N VH DL+ NI+ V + K+ DFGLA+ I +
Sbjct: 276 YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL-VG-ENLVCKVADFGLARLIEDN 333
Query: 136 HPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITY 172
P PE Y I+SD+WS G++
Sbjct: 334 EYTAR---QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 372
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 65.3 bits (159), Expect = 5e-13
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
L V QI G+ Y+ R N VH DL+ NI+ V + K+ DFGLA+ I +
Sbjct: 359 YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL-VG-ENLVCKVADFGLARLIEDN 416
Query: 136 HPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITY 172
P PE Y I+SD+WS G++
Sbjct: 417 EYTAR---QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 455
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain,
structural genomics., NPPSFA; NMR {Homo sapiens}
Length = 120
Score = 61.6 bits (150), Expect = 5e-13
Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 7 GIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSESIGG 63
P PP +V +TW+ P DG ITGY ++ + W + E
Sbjct: 16 DRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHR 73
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 64.9 bits (158), Expect = 6e-13
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 26/106 (24%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIM----CVSRTSHHIKIIDFGLAQKI 132
L L Q+ G+ ++H I+H DLKP NI+ C +KI+DFGLA+
Sbjct: 161 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC------TLKILDFGLARTA 214
Query: 133 NPDHPPRVLFGTPEFI-----PPEII---NYEPIGIESDMWSIGVI 170
TP + PE+I Y+ D+WS+G I
Sbjct: 215 GTSF-----MMTPYVVTRYYRAPEVILGMGYKE---NVDIWSVGCI 252
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 65.0 bits (158), Expect = 6e-13
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 51 TQPWVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPEN 110
+ + + E GGG L + +V + + L Q+ G+ Y+ N VH +L N
Sbjct: 407 AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARN 466
Query: 111 IMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEF----IPPEIINYEPIGIESDMWS 166
++ V+R H+ KI DFGL++ + D ++ PE IN+ SD+WS
Sbjct: 467 VLLVNR--HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWS 524
Query: 167 IGV 169
GV
Sbjct: 525 YGV 527
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 64.3 bits (157), Expect = 6e-13
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 64 GELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKI 123
G L + V L + + + QI +G+ Y+ + +VH +L N++ + + +++
Sbjct: 99 GSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVL-LK-SPSQVQV 156
Query: 124 IDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
DFG+A + PD + P E I++ +SD+WS GV
Sbjct: 157 ADFGVADLLPPDDKQLLYSEAK--TPIKWMALESIHFGKYTHQSDVWSYGV 205
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 64.3 bits (157), Expect = 7e-13
Identities = 29/124 (23%), Positives = 44/124 (35%), Gaps = 39/124 (31%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIM----CVSRTSHHIKIIDFGLAQKI 132
L + Q+ + + Y+H ++H D+KP NI+ C H+K+ DFGL++
Sbjct: 106 LEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAEC------HVKVADFGLSRSF 159
Query: 133 NPDHPPRVLFGTPEFIP----------------------PEII----NYEPIGIESDMWS 166
PEI+ Y GI DMWS
Sbjct: 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTK-GI--DMWS 216
Query: 167 IGVI 170
+G I
Sbjct: 217 LGCI 220
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 64.1 bits (156), Expect = 1e-12
Identities = 35/131 (26%), Positives = 46/131 (35%), Gaps = 47/131 (35%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIM----CVSRTSHHIKIIDFGLAQKI 132
LTE L + GV Y+H I+H DLKP N + C +K+ DFGLA+ +
Sbjct: 153 LTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDC------SVKVCDFGLARTV 206
Query: 133 NPDHPPRVLFGTPEFIP----------------------------PEII----NY-EPIG 159
+ PE+I NY E I
Sbjct: 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAI- 265
Query: 160 IESDMWSIGVI 170
D+WSIG I
Sbjct: 266 ---DVWSIGCI 273
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 64.0 bits (156), Expect = 1e-12
Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 20/106 (18%)
Query: 82 CVLFL-RQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQK-INPD---H 136
VL L +I + ++Y+H + VH D+K N++ + + ++D+GLA +
Sbjct: 153 TVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKA 212
Query: 137 PP----RVLFGTPEFIPPEIINYEPIGIE----SDMWSIGVITYVL 174
R GT EF I+ G+ D+ +G Y +
Sbjct: 213 YAADPKRCHDGTIEFTS---IDAH-NGVAPSRRGDLEILG---YCM 251
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 63.6 bits (155), Expect = 1e-12
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 20/106 (18%)
Query: 82 CVLFL-RQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDH---- 136
VL L ++ + ++Y+H N VH D+K N++ + + + D+GL+ + P+
Sbjct: 152 TVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQ 211
Query: 137 ----PPRVLFGTPEFIPPEIINYEPIGIE----SDMWSIGVITYVL 174
P + GT EF ++ G+ SD+ +G Y +
Sbjct: 212 YQENPRKGHNGTIEFTS---LDAH-KGVALSRRSDVEILG---YCM 250
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 63.5 bits (155), Expect = 1e-12
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDH 136
+ +LF +QICEG+ Y+H + +H DL N++ + +KI DFGLA+ + H
Sbjct: 131 IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVL-LD-NDRLVKIGDFGLAKAVPEGH 188
Query: 137 PP-RVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITY 172
RV P PE + SD+WS GV Y
Sbjct: 189 EYYRV--REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 228
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 62.7 bits (153), Expect = 2e-12
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 8/112 (7%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
G L +R+ + Q+ EG+ Y+ +H DL N++ +R +K
Sbjct: 104 LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR--DLVK 161
Query: 123 IIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
I DFGL + + + + +P PE + SD W GV
Sbjct: 162 IGDFGLMRALPQN-DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGV 212
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 112
Score = 59.7 bits (145), Expect = 2e-12
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSES 60
DPP + ++ R +V + W+ P Y GG IT Y+VE + W++ + S
Sbjct: 11 IDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFS 63
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 62.3 bits (152), Expect = 3e-12
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
G+L + + + T +D + F Q+ G++Y+ VH DL N M + S +K
Sbjct: 107 HGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCM-LD-ESFTVK 164
Query: 123 IIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
+ DFGLA+ I V +P E + +SD+WS GV
Sbjct: 165 VADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGV 216
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 62.3 bits (152), Expect = 3e-12
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 51 TQPWVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPEN 110
+ + + E GGG L + +V + + L Q+ G+ Y+ N VH DL N
Sbjct: 81 AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARN 140
Query: 111 IMCVSRTSHHIKIIDFGLAQKINPDHPP-RVLFGTPEFIP-----PEIINYEPIGIESDM 164
++ V+R H+ KI DFGL++ + D P PE IN+ SD+
Sbjct: 141 VLLVNR--HYAKISDFGLSKALGADDSYYTARSAGK--WPLKWYAPECINFRKFSSRSDV 196
Query: 165 WSIGV 169
WS GV
Sbjct: 197 WSYGV 201
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 62.4 bits (152), Expect = 3e-12
Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 21/114 (18%)
Query: 76 TLTERDCVLFLRQICEGVDYMH--------RNNIVHLDLKPENIMCVSRTSHHIKIIDFG 127
TL C+ + I G+ ++H + I H DLK +NI+ V + + I D G
Sbjct: 101 TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNIL-VKK-NGQCCIADLG 158
Query: 128 LAQKINPDHPPRVLF-----GTPEFIPPEIINYEPIGIE------SDMWSIGVI 170
LA + + GT ++ PE+++ D+W+ G++
Sbjct: 159 LAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLV 212
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin
type III domain containing protein, cytoskeleton,
muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Length = 111
Score = 58.9 bits (143), Expect = 4e-12
Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 4 ESEGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSES 60
S G P T+ + W P G I GY+VE G++ WV ++
Sbjct: 4 GSSGPTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKE 61
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 62.0 bits (151), Expect = 5e-12
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDH 136
+ F QI EG+ ++ + N +H DL+ NI+ VS S KI DFGLA+ I +
Sbjct: 281 QPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL-VS-ASLVCKIADFGLARVIEDNE 338
Query: 137 PPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
P PE IN+ I+SD+WS G+
Sbjct: 339 YTAREGAK---FPIKWTAPEAINFGSFTIKSDVWSFGI 373
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 62.1 bits (151), Expect = 6e-12
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 8/127 (6%)
Query: 48 KAGTQPWVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLK 107
++ P V + + G+L + + T +D + F Q+ +G+ ++ VH DL
Sbjct: 161 RSEGSPLV-VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLA 219
Query: 108 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIES 162
N M + +K+ DFGLA+ + V T +P E + + +S
Sbjct: 220 ARNCM-LD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKS 277
Query: 163 DMWSIGV 169
D+WS GV
Sbjct: 278 DVWSFGV 284
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 61.3 bits (149), Expect = 1e-11
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
G + + L E + +G+ Y+H +N++H D+K NI+ +S +K
Sbjct: 137 LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNIL-LSEPG-LVK 194
Query: 123 IIDFGLAQKINPDHPPRVLF-GTPEFIPPEIINYE---PIGIESDMWSIGVIT 171
+ DFG A + P F GTP ++ PE+I + D+WS+G IT
Sbjct: 195 LGDFGSASIMA----PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG-IT 242
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 61.4 bits (149), Expect = 1e-11
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Query: 52 QPWVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENI 111
P + E GEL + F+L +L+ Q+ + Y+ VH D+ N+
Sbjct: 463 NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNV 522
Query: 112 MCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWS 166
+ VS ++ +K+ DFGL++ + + +P PE IN+ SD+W
Sbjct: 523 L-VS-SNDCVKLGDFGLSRYMEDST---YYKASKGKLPIKWMAPESINFRRFTSASDVWM 577
Query: 167 IGV 169
GV
Sbjct: 578 FGV 580
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 60.9 bits (148), Expect = 1e-11
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 21/114 (18%)
Query: 76 TLTERDCVLFLRQICEGVDYMH--------RNNIVHLDLKPENIMCVSRTSHHIKIIDFG 127
T+T + G+ ++H + I H DLK +NI+ + + I D G
Sbjct: 96 TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL--VKKNGTCCIADLG 153
Query: 128 LAQKINP-----DHPPRVLFGTPEFIPPEIINYEPIGIE------SDMWSIGVI 170
LA + + D P GT ++ PE+++ +D++++G++
Sbjct: 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 207
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 60.7 bits (148), Expect = 1e-11
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 8/127 (6%)
Query: 48 KAGTQPWVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLK 107
++ P V + + G+L + + T +D + F Q+ +G+ Y+ VH DL
Sbjct: 97 RSEGSPLV-VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLA 155
Query: 108 PENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIES 162
N M + +K+ DFGLA+ + V T +P E + + +S
Sbjct: 156 ARNCM-LD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS 213
Query: 163 DMWSIGV 169
D+WS GV
Sbjct: 214 DVWSFGV 220
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 60.9 bits (148), Expect = 1e-11
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 21/114 (18%)
Query: 76 TLTERDCVLFLRQICEGVDYMH--------RNNIVHLDLKPENIMCVSRTSHHIKIIDFG 127
T+T + G+ ++H + I H DLK +NI+ + + I D G
Sbjct: 135 TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL--VKKNGTCCIADLG 192
Query: 128 LAQKINP-----DHPPRVLFGTPEFIPPEIINYEPIGIE------SDMWSIGVI 170
LA + + D P GT ++ PE+++ +D++++G++
Sbjct: 193 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 246
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 60.8 bits (148), Expect = 1e-11
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 8/119 (6%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + G L + D T V LR I G+ Y+ VH DL NI+ ++ ++
Sbjct: 126 EYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNIL-IN-SN 183
Query: 119 HHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITY 172
K+ DFGL + + D P IP PE I Y SD+WS G++ +
Sbjct: 184 LVCKVSDFGLGRVLE-DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 60.9 bits (148), Expect = 1e-11
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 76 TLTERDCVLFLRQICEGVDYMH--------RNNIVHLDLKPENIMCVSRTSHHIKIIDFG 127
TL + + G+ ++H + I H DLK +NI+ + + I D G
Sbjct: 130 TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNIL--VKKNGTCCIADLG 187
Query: 128 LAQKINPDHPPRVLF-----GTPEFIPPEII------NYEPIGIESDMWSIGVI 170
LA K D + GT ++PPE++ N+ I +DM+S G+I
Sbjct: 188 LAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLI 241
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain,
SLOW- type protein, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 110
Score = 57.0 bits (138), Expect = 2e-11
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSES 60
PP+ S T+V + W P + G + GYV+E GT+ W+ ++
Sbjct: 8 TSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKD 60
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 60.4 bits (147), Expect = 2e-11
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 14/99 (14%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
L + F +CE ++Y+ NN VH DL N++ VS + K+ DFGL ++ +
Sbjct: 285 VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL-VS-EDNVAKVSDFGLTKEASST 342
Query: 136 H-----PPRVLFGTPEFIPPEIINYEPIGIESDMWSIGV 169
P + + PE + + +SD+WS G+
Sbjct: 343 QDTGKLPVK-------WTAPEALREKKFSTKSDVWSFGI 374
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 60.0 bits (146), Expect = 2e-11
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 8/116 (6%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + G L + D T V LR + G+ Y+ VH DL N++ V ++
Sbjct: 130 EYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVL-VD-SN 187
Query: 119 HHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
K+ DFGL++ + D P T IP PE I + SD+WS GV
Sbjct: 188 LVCKVSDFGLSRVLE-DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGV 242
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 60.0 bits (146), Expect = 2e-11
Identities = 37/124 (29%), Positives = 52/124 (41%), Gaps = 24/124 (19%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + G L + + D + V LR I G+ Y+ N VH DL NI+ V+ ++
Sbjct: 126 EYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNIL-VN-SN 183
Query: 119 HHIKIIDFGLAQKINPDHPPRVLFGTPEFI-------------PPEIINYEPIGIESDMW 165
K+ DFGL+ RVL PE PE I+Y SD+W
Sbjct: 184 LVCKVSDFGLS---------RVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVW 234
Query: 166 SIGV 169
S G+
Sbjct: 235 SFGI 238
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 59.6 bits (145), Expect = 2e-11
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 77 LTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDH 136
+ +++ + + Q+ G+ Y+ +N VH DL N++ V++ H+ KI DFGL++ + D
Sbjct: 114 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ--HYAKISDFGLSKALRADE 171
Query: 137 PPRVLFGTPEF----IPPEIINYEPIGIESDMWSIGV 169
++ PE INY +SD+WS GV
Sbjct: 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGV 208
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold,
fibronectin type III, structural genomics; NMR {Homo
sapiens} SCOP: b.1.2.1
Length = 117
Score = 57.0 bits (138), Expect = 3e-11
Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Query: 7 GIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEM--KAGTQPWVELSESIGG 63
+P PPS + SV ++W P G + Y++E ++ + W ++ +
Sbjct: 14 DLPGPPSKPQVTDVTKNSVTLSWQ-PGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKT 71
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 59.9 bits (145), Expect = 3e-11
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Query: 73 DDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKI 132
LT + + Q+ +G++++ +H DL NI+ + +KI DFGLA+ I
Sbjct: 186 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNVVKICDFGLARDI 243
Query: 133 NPDHPPRVLFGTP---EFIPPEIINYEPIGIESDMWSIGV 169
D +++ PE I I+SD+WS GV
Sbjct: 244 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 283
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 59.2 bits (144), Expect = 3e-11
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 18/120 (15%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E GEL + ++L +L+ Q+ + Y+ VH D+ N++ VS ++
Sbjct: 95 ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVL-VS-SN 152
Query: 119 HHIKIIDFGLAQKINPDH---------PPRVLFGTPEFIPPEIINYEPIGIESDMWSIGV 169
+K+ DFGL++ + P + ++ PE IN+ SD+W GV
Sbjct: 153 DCVKLGDFGLSRYMEDSTYYKASKGKLPIK-------WMAPESINFRRFTSASDVWMFGV 205
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 59.3 bits (144), Expect = 4e-11
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 27/119 (22%)
Query: 75 FTLTERDCVLFL-RQICEGVDYMHRNNIVHLDLKPENIM---CVSRTSHHIKIIDFGLAQ 130
F+L VL + Q+ ++Y+H N+++ D+KPEN + ++T I IIDF LA+
Sbjct: 102 FSLK---TVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158
Query: 131 K-INPD---HPP----RVLFGTPEFIPPEIINYEPIGIES----DMWSIGVITYVL-YL 176
+ I+P+ H P + L GT ++ IN +G E D+ ++G ++ Y
Sbjct: 159 EYIDPETKKHIPYREHKSLTGTARYMS---INTH-LGKEQSRRDDLEALG---HMFMYF 210
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 59.1 bits (144), Expect = 4e-11
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 10/115 (8%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
G L + + + +CEG+ Y+ ++H DL N + V + IK
Sbjct: 87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCL-VG-ENQVIK 144
Query: 123 IIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITY 172
+ DFG+ + + D P PE+ ++ +SD+WS GV+ +
Sbjct: 145 VSDFGMTRFVLDDQYTSSTGTK---FPVKWASPEVFSFSRYSSKSDVWSFGVLMW 196
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 59.1 bits (144), Expect = 4e-11
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 22/118 (18%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
GEL + + +L VL+ QIC+ + Y+ N VH D+ NI+ V+ + +K
Sbjct: 96 YGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNIL-VA-SPECVK 153
Query: 123 IIDFGLAQKINPDHPPRVLFGTPEF------IP-----PEIINYEPIGIESDMWSIGV 169
+ DFGL+ R + + +P PE IN+ SD+W V
Sbjct: 154 LGDFGLS---------RYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAV 202
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 59.2 bits (144), Expect = 4e-11
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIK 122
GG+ + + L + + + G++Y+ +H DL N + V+ + +K
Sbjct: 196 GGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCL-VT-EKNVLK 253
Query: 123 IIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
I DFG++++ G +P PE +NY ESD+WS G+
Sbjct: 254 ISDFGMSREEADGVYAAS--GGLRQVPVKWTAPEALNYGRYSSESDVWSFGI 303
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 58.9 bits (143), Expect = 5e-11
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSH-HIKIIDFGLAQKIN- 133
L E LR++ EG++Y+H+N +H D+K NI+ ++I DFG++ +
Sbjct: 117 VLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLAT 173
Query: 134 ----PDHPPRVLF-GTPEFIPPEII-NYEPIGIESDMWSIGVIT 171
+ R F GTP ++ PE++ ++D+WS G IT
Sbjct: 174 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG-IT 216
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated
oncogenes (CDON)binding...; fibronectin type III, FN3;
NMR {Mus musculus} SCOP: b.1.2.1
Length = 121
Score = 56.2 bits (136), Expect = 5e-11
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK--AGTQPWVELSESIGG 63
P+ P + + TSV +TW P +GG I + VE K W+ + +I
Sbjct: 15 LSPPEAPDRPTISTASETSVYVTWI-PRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPP 73
Query: 64 GEL 66
L
Sbjct: 74 SRL 76
>2crz_A Fibronectin type-III domain containing protein 3A; structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 110
Score = 55.8 bits (135), Expect = 6e-11
Identities = 15/58 (25%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Query: 5 SEGIPDPPSGAIGVSNNR-TSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSES 60
S G P P + + + W P DGG I+ Y VEM E+ +
Sbjct: 5 SSGPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQG 62
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 58.4 bits (142), Expect = 7e-11
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 73 DDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKI 132
LT + QI EG+ ++ N +H DL+ NI+ VS + KI DFGLA+ I
Sbjct: 102 SGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL-VS-DTLSCKIADFGLARLI 159
Query: 133 NPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
+ P PE INY I+SD+WS G+
Sbjct: 160 EDNEYTAREGAK---FPIKWTAPEAINYGTFTIKSDVWSFGI 198
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 58.0 bits (141), Expect = 8e-11
Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 10/119 (8%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E I G L + + L + +CEG+ ++ + +H DL N + V
Sbjct: 83 EYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCL-VD-RD 140
Query: 119 HHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITY 172
+K+ DFG+ + + D + P PE+ +Y +SD+W+ G++ +
Sbjct: 141 LCVKVSDFGMTRYVLDDQYVSSVGTK---FPVKWSAPEVFHYFKYSSKSDVWAFGILMW 196
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 58.0 bits (141), Expect = 9e-11
Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Query: 59 ESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTS 118
E + G L + + + + +CE ++Y+ +H DL N + V+
Sbjct: 99 EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL-VN-DQ 156
Query: 119 HHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGVITY 172
+K+ DFGL++ + D + P PE++ Y +SD+W+ GV+ +
Sbjct: 157 GVVKVSDFGLSRYVLDDEYTSSVGSK---FPVRWSPPEVLMYSKFSSKSDIWAFGVLMW 212
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 58.0 bits (141), Expect = 1e-10
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHI-KIIDFGLAQKINP 134
T + RD + F Q+ +G+ ++ N +H D+ N++ T+ H+ KI DFGLA+ I
Sbjct: 160 TASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL---TNGHVAKIGDFGLARDIMN 216
Query: 135 DHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
D V +P PE I ++SD+WS G+
Sbjct: 217 DSNYIV--KGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 58.1 bits (141), Expect = 1e-10
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 26/116 (22%)
Query: 75 FTLTERDCVLFL-RQICEGVDYMHRNNIVHLDLKPENIMC---VSRTSHHIKIIDFGLAQ 130
F++ V +Q+ V +H ++V+ D+KP+N + S+ ++ I ++DFG+ +
Sbjct: 103 FSVK---TVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159
Query: 131 K-INPD---HPP----RVLFGTPEFIPPEIINYEPIGIES----DMWSIGVITYVL 174
+P H P + L GT ++ IN +G E D+ ++G +V
Sbjct: 160 FYRDPVTKQHIPYREKKNLSGTARYMS---INTH-LGREQSRRDDLEALG---HVF 208
>1x5x_A Fibronectin type-III domain containing protein 3A; structural
genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 109
Score = 55.0 bits (133), Expect = 1e-10
Identities = 9/58 (15%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Query: 5 SEGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSESI 61
P P+ + T + + WS P Y++EM+ + +
Sbjct: 4 GSSGPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDG 61
>2crm_A Fibronectin type-III domain containing protein 3A; structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 120
Score = 55.1 bits (133), Expect = 1e-10
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Query: 9 PDPPSGAIGVSN-NRTSVVITWSSPPYDGGCMITGYVVEMKAGTQ--PWVELSES 60
P P + S ITW P +GG I YVVEM G+ W +
Sbjct: 18 PGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYSG 72
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 121
Score = 55.4 bits (134), Expect = 1e-10
Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 7 GIPDPPSGAIGVSNNRT--SVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGG 64
+P P + + ++ +TW+ P+DG + Y++EM PW L S+
Sbjct: 16 QLPHAPEHPVATLSTVERRAINLTWT-KPFDGNSPLIRYILEMSENNAPWTVLLASVDPK 74
Query: 65 EL 66
Sbjct: 75 AT 76
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 57.6 bits (140), Expect = 1e-10
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 18/106 (16%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
++ + QI ++Y+ + N +H DL N + V +H +K+ DFGL++ + D
Sbjct: 107 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL-VG-ENHLVKVADFGLSRLMTGD 164
Query: 136 H---------PPRVLFGTPEFIPPEIINYEPIGIESDMWSIGVITY 172
P + + PE + Y I+SD+W+ GV+ +
Sbjct: 165 TYTAHAGAKFPIK-------WTAPESLAYNKFSIKSDVWAFGVLLW 203
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural
protein; 1.65A {Homo sapiens}
Length = 197
Score = 56.6 bits (137), Expect = 1e-10
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 3 FESEGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSES 60
++ P PP + R SV ++W P +DGG I GY+VEM+ G+ W +
Sbjct: 97 VKASERPLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCATV 155
Score = 55.4 bits (134), Expect = 4e-10
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 8 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSESI 61
P PP +TSV +TW P DGG I Y+VE + + + + ++ +
Sbjct: 5 TPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNC 59
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 57.6 bits (140), Expect = 1e-10
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 73 DDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKI 132
D+ L D + F Q+ +G+ ++ N +H DL NI+ ++ KI DFGLA+ I
Sbjct: 138 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL-LT-HGRITKICDFGLARDI 195
Query: 133 NPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
D V +P PE I ESD+WS G+
Sbjct: 196 KNDSNYVV--KGNARLPVKWMAPESIFNCVYTFESDVWSYGI 235
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 57.5 bits (139), Expect = 2e-10
Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 27/129 (20%)
Query: 76 TLTERDCVLFLRQICEGVDYMH---------RNNIVHLDLKPENIMCVSRTSHHIKIIDF 126
T + G+ Y+H + I H DL N++ + I DF
Sbjct: 107 TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVL--VKNDGTCVISDF 164
Query: 127 GLAQKINPDHPPRVLF---------GTPEFIPPEII-------NYEPIGIESDMWSIGVI 170
GL+ ++ + R GT ++ PE++ + E + DM+++G+I
Sbjct: 165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLI 224
Query: 171 TYVLYLQCT 179
+ ++++CT
Sbjct: 225 YWEIFMRCT 233
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III
repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP:
b.1.2.1
Length = 105
Score = 54.3 bits (131), Expect = 2e-10
Identities = 11/55 (20%), Positives = 17/55 (30%), Gaps = 2/55 (3%)
Query: 8 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSESI 61
P P V ++ + + P GG I Y E + G + W
Sbjct: 6 TPSSP-SIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA 59
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 57.0 bits (138), Expect = 2e-10
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 24/114 (21%)
Query: 75 FTLTERDCVLFL-RQICEGVDYMHRNNIVHLDLKPENI-MCVSRTSHHIKIIDFGLAQK- 131
F+L VL L Q+ ++Y+H N +H D+KP+N M + + + + IIDFGLA+K
Sbjct: 102 FSLK---TVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158
Query: 132 INPD---HPP----RVLFGTPEFIPPEIINYEPIGIES----DMWSIGVITYVL 174
+ H P + L GT + IN +GIE D+ S+G YVL
Sbjct: 159 RDARTHQHIPYRENKNLTGTARYAS---IN-THLGIEQSRRDDLESLG---YVL 205
>1x3d_A Fibronectin type-III domain containing protein 3A; structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 118
Score = 54.3 bits (131), Expect = 2e-10
Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 7 GIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIG 62
PD P+ + + S+ + W P D G I +V+E G +G
Sbjct: 16 CEPDIPNPPRIANRTKNSLTLQWK-APSDNGSKIQNFVLEWDEGKGNGEFCQCYMG 70
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 56.5 bits (137), Expect = 3e-10
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 8/103 (7%)
Query: 73 DDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHI-KIIDFGLAQK 131
+L D + R I G Y+ N+ +H D+ N + + KI DFG+A+
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192
Query: 132 INPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
I R G +P PE ++D WS GV
Sbjct: 193 IYRASYYRK--GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 233
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 56.8 bits (137), Expect = 4e-10
Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 13/106 (12%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLA------ 129
+ E L+ + + +DY+H VH +K +I+ + +
Sbjct: 124 GMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISV--DGKVYLSGLRSNLSMISH 181
Query: 130 -QKINPDHPPRVLF-GTPEFIPPEIINYEPIG--IESDMWSIGVIT 171
Q+ H ++ PE++ G +SD++S+G IT
Sbjct: 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG-IT 226
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 56.4 bits (136), Expect = 4e-10
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 86 LRQICEGVDYMHRN-NIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGT 144
+ +G+ Y+ I+H D+KP NI+ SR IK+ DFG++ ++ D GT
Sbjct: 137 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLI-DSMANSFVGT 193
Query: 145 PEFIPPEIINYEPIGIESDMWSIGV 169
++ PE + ++SD+WS+G+
Sbjct: 194 RSYMSPERLQGTHYSVQSDIWSMGL 218
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 56.6 bits (137), Expect = 4e-10
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 8/103 (7%)
Query: 73 DDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHI-KIIDFGLAQK 131
+L D + R I G Y+ N+ +H D+ N + + KI DFG+A+
Sbjct: 174 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 233
Query: 132 INPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
I R G +P PE ++D WS GV
Sbjct: 234 IYRAGYYRK--GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 274
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 56.6 bits (136), Expect = 4e-10
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 25/117 (21%)
Query: 75 FTLTERDCVLFL-RQICEGVDYMHRNNIVHLDLKPENI-MCVSRTSHHIKIIDFGLAQK- 131
+L VL L Q+ V+++H + +H D+KP+N M + R ++ + IIDFGLA+K
Sbjct: 100 LSLK---TVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156
Query: 132 INPD---HPP----RVLFGTPEFIPPEIINYEPIGIE----SDMWSIGVITYVL-YL 176
+ H P + L GT + +N +GIE D+ S+G YVL Y
Sbjct: 157 RDTSTHQHIPYRENKNLTGTARYAS---VN-THLGIEQSRRDDLESLG---YVLMYF 206
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM
related cell adhesion molecule, fibronectin type III
domain, structural genomics; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 127
Score = 53.9 bits (130), Expect = 5e-10
Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 7 GIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSESIGGGE 65
+P+PP SV ++W+ P D IT +++E + A +P + ++ G
Sbjct: 15 DVPNPPFDLELTDQLDKSVQLSWT-PGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGT 73
Query: 66 LFERVV 71
+
Sbjct: 74 QTTAQL 79
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Length = 305
Score = 55.9 bits (135), Expect = 5e-10
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 7 GIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSESIG 62
+PDPP G +R SV +TW+ P DGG IT Y+VE + W+ + ++
Sbjct: 197 DVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQARE 253
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 55.7 bits (135), Expect = 6e-10
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
L + QI G+ Y+ + VH DL N + V + +KI DFG+++ +
Sbjct: 129 ELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCL-VGA-NLLVKIGDFGMSRDVYST 186
Query: 136 HPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
RV G +P PE I Y ESD+WS GV
Sbjct: 187 DYYRV--GGHTMLPIRWMPPESIMYRKFTTESDVWSFGV 223
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 55.8 bits (135), Expect = 6e-10
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 68 ERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFG 127
R+ + F L + V F+ I G++Y+ N +H DL N M ++ + + DFG
Sbjct: 125 SRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCM-LA-EDMTVCVADFG 182
Query: 128 LAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
L++KI R G +P E + + SD+W+ GV
Sbjct: 183 LSRKIYSGDYYRQ--GCASKLPVKWLALESLADNLYTVHSDVWAFGV 227
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 55.7 bits (135), Expect = 6e-10
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 14/99 (14%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
L + F +CE ++Y+ NN VH DL N++ VS + K+ DFGL ++ +
Sbjct: 113 VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL-VS-EDNVAKVSDFGLTKEASST 170
Query: 136 H-----PPRVLFGTPEFIPPEIINYEPIGIESDMWSIGV 169
P + + PE + + +SD+WS G+
Sbjct: 171 QDTGKLPVK-------WTAPEALREKKFSTKSDVWSFGI 202
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 55.9 bits (135), Expect = 7e-10
Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRN----------NIVHLDLKPENIMCVSRTSHHIKIID 125
++ + + G+ Y+H + I H D+K +N++ + + I D
Sbjct: 117 VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL--KNNLTACIAD 174
Query: 126 FGLAQKINPDHPP---RVLFGTPEFIPPEIINYEPIGIE-----SDMWSIGVI 170
FGLA K GT ++ PE++ DM+++G++
Sbjct: 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLV 227
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA,
structural genomics, riken structural
genomics/proteomics initiative, cell adhesion; NMR
{Homo sapiens} SCOP: b.1.2.1
Length = 108
Score = 53.0 bits (127), Expect = 7e-10
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGE 65
PP G + V++ W PP + GYV+E + G+Q W L ++ G E
Sbjct: 8 LSPPRGLV-AVRTPRGVLLHWD-PPELVPKRLDGYVLEGRQGSQGWEVLDPAVAGTE 62
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III,
protein binding; HET: MSE; 1.30A {Drosophila
melanogaster} SCOP: b.1.2.1
Length = 115
Score = 52.6 bits (126), Expect = 1e-09
Identities = 13/72 (18%), Positives = 26/72 (36%), Gaps = 3/72 (4%)
Query: 7 GIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK--AGTQPWVELSESIGGG 64
G PP+ + SV++ W P + G I + V+ + + W +++I G
Sbjct: 1 GSTYPPTPPNVTRLSDESVMLRW-MVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYG 59
Query: 65 ELFERVVADDFT 76
+
Sbjct: 60 KPKWNSELGKSF 71
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 55.0 bits (133), Expect = 1e-09
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 9/107 (8%)
Query: 68 ERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFG 127
R+ + + + F+ I G++Y+ N +H DL N M + + + DFG
Sbjct: 135 SRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCM-LR-DDMTVCVADFG 192
Query: 128 LAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
L++KI R G +P E + +SD+W+ GV
Sbjct: 193 LSKKIYSGDYYRQ--GRIAKMPVKWIAIESLADRVYTSKSDVWAFGV 237
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 55.0 bits (133), Expect = 1e-09
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
LT + + Q+ +G++++ +H DL NI+ +S + +KI DFGLA+ I D
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL-LS-EKNVVKICDFGLARDIYKD 201
Query: 136 HPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
+P PE I I+SD+WS GV
Sbjct: 202 PDYVR--KGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 55.0 bits (133), Expect = 1e-09
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
L + Q+ G+ Y+ + VH DL N + V + +KI DFG+++ I
Sbjct: 154 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL-VGQ-GLVVKIGDFGMSRDIYST 211
Query: 136 HPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
RV G +P PE I Y ESD+WS GV
Sbjct: 212 DYYRV--GGRTMLPIRWMPPESILYRKFTTESDVWSFGV 248
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 120
Score = 52.0 bits (125), Expect = 2e-09
Identities = 10/56 (17%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSES 60
+P P + + + +TW +P D Y V G + S
Sbjct: 15 GPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTS 70
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1,
NCAM-120, CD56 antigen, membra protein, glycoprotein,
structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo
sapiens}
Length = 122
Score = 52.1 bits (125), Expect = 2e-09
Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSESI 61
P PS V ++ + + P GG I Y E + G + W
Sbjct: 5 SSGPSSPS-IDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA 60
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics,
riken structural genomics/proteomics initiative, RSGI,
unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 124
Score = 52.3 bits (126), Expect = 2e-09
Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK 48
+P PP+ + SV + + P YDG I+ ++VE +
Sbjct: 15 PELPGPPTNLGISNIGPRSVTLQFR-PGYDGKTSISRWLVEAQ 56
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 54.1 bits (131), Expect = 2e-09
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
L D V + QI G++Y+ +++VH DL N++ V ++KI D GL +++
Sbjct: 124 ALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVL-VYD-KLNVKISDLGLFREVYAA 181
Query: 136 HPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
++ +P PE I Y I+SD+WS GV
Sbjct: 182 DYYKL--LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 218
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor;
2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A
1lwr_A
Length = 209
Score = 53.7 bits (129), Expect = 2e-09
Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSE 59
P P + + S+ + DGG I Y+V +A + W
Sbjct: 110 PSAPKLEGQMGEDGNSIKVNLI-KQDDGGSPIRHYLVRYRALSSEWKPEIR 159
Score = 51.4 bits (123), Expect = 1e-08
Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSESI 61
P PS V ++ + + P GG I Y E + G + W
Sbjct: 9 PSSPSIDQ-VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA 61
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 53.8 bits (130), Expect = 3e-09
Identities = 21/118 (17%), Positives = 47/118 (39%), Gaps = 18/118 (15%)
Query: 63 GGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIM------CVSR 116
G L + + + + +Q+ + ++ N ++H ++ +NI+ +
Sbjct: 96 FGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTG 155
Query: 117 TSHHIKIIDFGLAQKINPD----HPPRVLFGTPEFIPPE-IINYEPIGIESDMWSIGV 169
IK+ D G++ + P ++PPE I N + + + +D WS G
Sbjct: 156 NPPFIKLSDPGISITVLPKDILQERIP-------WVPPECIENPKNLNLATDKWSFGT 206
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 53.9 bits (130), Expect = 3e-09
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 86 LRQICEGVDYMHRN-NIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGT 144
+ ++++ N I+H D+KP NI+ +IK+ DFG++ ++ G
Sbjct: 131 TLATVKALNHLKENLKIIHRDIKPSNILLDRSG--NIKLCDFGISGQLVDSIAKTRDAGC 188
Query: 145 PEFIPPEIINYEPIG----IESDMWSIGVIT 171
++ PE I+ + SD+WS+G IT
Sbjct: 189 RPYMAPERIDPSASRQGYDVRSDVWSLG-IT 218
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 53.6 bits (129), Expect = 3e-09
Identities = 21/125 (16%), Positives = 37/125 (29%), Gaps = 32/125 (25%)
Query: 50 GTQPWVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPE 109
V ++E I GG L E D + + + ++ + D HR + P
Sbjct: 103 RAGGLV-VAEWIRGGSLQEVA---DTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPS 158
Query: 110 NIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPIGIESDMWSIGV 169
+ ++ D V+ P +P + D+ IG
Sbjct: 159 RVR-------------------VSIDG--DVVLAYPATMPDA-------NPQDDIRGIGA 190
Query: 170 ITYVL 174
Y L
Sbjct: 191 SLYAL 195
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 53.5 bits (129), Expect = 4e-09
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 9/102 (8%)
Query: 73 DDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKI 132
+ + +I +G+ Y++ N VH DL N M V+ +KI DFG+ + I
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCM-VA-EDFTVKIGDFGMTRDI 188
Query: 133 NPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
R G +P PE + SD+WS GV
Sbjct: 189 YETDYYRK--GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGV 228
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 53.5 bits (129), Expect = 4e-09
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 86 LRQICEGVDYMHRN-NIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGT 144
I + ++++H +++H D+KP N++ + +K+ DFG++ + + G
Sbjct: 159 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALG--QVKMCDFGISGYLVDSVAKTIDAGC 216
Query: 145 PEFIPPEIINYEPIG----IESDMWSIGV 169
++ PE IN E ++SD+WS+G+
Sbjct: 217 KPYMAPERINPELNQKGYSVKSDIWSLGI 245
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3,
immunoglobulin-like beta- sandwich fold, KIAA0970,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 106
Score = 50.8 bits (122), Expect = 4e-09
Identities = 9/56 (16%), Positives = 13/56 (23%), Gaps = 1/56 (1%)
Query: 5 SEGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSES 60
PD + T + W P G +T Y +E
Sbjct: 4 GSSGPDQCKPPQVTCRSATCAQVNWE-VPLSNGTDVTEYRLEWGGVEGSMQICYCG 58
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain,
immunoglobulin superfamily, transmembrane,
phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A
{Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Length = 389
Score = 53.7 bits (129), Expect = 4e-09
Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 GIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSESIG 62
+P P G + ++T+ ++++ P GG I Y V++K ++ W +
Sbjct: 194 DVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVRSHGV 250
Score = 40.9 bits (96), Expect = 1e-04
Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVE 56
P PPS G ++ S ++ + DGG I Y+V+ + +
Sbjct: 294 PSPPS-IHGQPSSGKSFKLSIT-KQDDGGAPILEYIVKYRSKDKEDQWL 340
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 53.1 bits (128), Expect = 5e-09
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 86 LRQICEGVDYMH-RNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGT 144
I + + Y+ ++ ++H D+KP NI+ R IK+ DFG++ ++ D G
Sbjct: 130 TVAIVKALYYLKEKHGVIHRDVKPSNILLDERG--QIKLCDFGISGRLVDDKAKDRSAGC 187
Query: 145 PEFIPPEIINYEPIG-----IESDMWSIGV 169
++ PE I+ I +D+WS+G+
Sbjct: 188 AAYMAPERIDPPDPTKPDYDIRADVWSLGI 217
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 53.5 bits (129), Expect = 5e-09
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
L+ +D V Q+ G++Y+ +H DL N++ V+ + +KI DFGLA+ I+
Sbjct: 187 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL-VT-EDNVMKIADFGLARDIHHI 244
Query: 136 HPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
+ T +P PE + +SD+WS GV
Sbjct: 245 DYYKK--TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 281
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 53.1 bits (128), Expect = 5e-09
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 9/122 (7%)
Query: 53 PWVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIM 112
E + D LT D + F Q+ +G++++ + VH DL N++
Sbjct: 145 EKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVL 204
Query: 113 CVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSI 167
V+ +KI DFGLA+ I D V +P PE + I+SD+WS
Sbjct: 205 -VT-HGKVVKICDFGLARDIMSDSNYVV--RGNARLPVKWMAPESLFEGIYTIKSDVWSY 260
Query: 168 GV 169
G+
Sbjct: 261 GI 262
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 53.0 bits (128), Expect = 7e-09
Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 9/122 (7%)
Query: 53 PWVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIM 112
S G D+ LT D + F QI +G+ Y+ +VH DL NI+
Sbjct: 123 VGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNIL 182
Query: 113 CVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSI 167
V+ +KI DFGL++ + + + IP E + +SD+WS
Sbjct: 183 -VA-EGRKMKISDFGLSRDVYEEDSYVK--RSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
Query: 168 GV 169
GV
Sbjct: 239 GV 240
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 53.0 bits (127), Expect = 7e-09
Identities = 21/137 (15%), Positives = 42/137 (30%), Gaps = 46/137 (33%)
Query: 85 FLRQICEGVDYMHR-NNIVHLDLKPENIM------------------------------- 112
++Q+ +G+DY+H I+H D+KPENI+
Sbjct: 151 IIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAV 210
Query: 113 --------------CVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTPEFIPPEIINYEPI 158
+ + +K+ L T ++ E++
Sbjct: 211 STAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGY 270
Query: 159 GIESDMWSIGVITYVLY 175
+D+WS + + L
Sbjct: 271 NTPADIWSTACMAFELA 287
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin
domain, fibronectin type III repeat, CE adhesion; 1.80A
{Homo sapiens}
Length = 215
Score = 51.7 bits (124), Expect = 1e-08
Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSESI 61
P PS V ++ + + P GG I Y E + G + W
Sbjct: 114 PSSPSIDQ-VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA 166
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 51.9 bits (125), Expect = 2e-08
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 67 FERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDF 126
++ + +T +D V Q+ G++Y+ +H DL N++ V+ ++ +KI DF
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL-VT-ENNVMKIADF 201
Query: 127 GLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
GLA+ IN + T +P PE + +SD+WS GV
Sbjct: 202 GLARDINNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 51.1 bits (123), Expect = 2e-08
Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 86 LRQICEGVDYMHRN-NIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGT 144
I + ++++H +++H D+KP N++ + +K+ DFG++ + D + G
Sbjct: 115 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALG--QVKMCDFGISGYLVDDVAKDIDAGC 172
Query: 145 PEFIPPEIINYEPIG----IESDMWSIGV 169
++ PE IN E ++SD+WS+G+
Sbjct: 173 KPYMAPERINPELNQKGYSVKSDIWSLGI 201
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 51.2 bits (123), Expect = 2e-08
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
+T +D V Q+ G++Y+ +H DL N++ V+ ++ +KI DFGLA+ IN
Sbjct: 199 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL-VT-ENNVMKIADFGLARDINNI 256
Query: 136 HPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
+ T +P PE + +SD+WS GV
Sbjct: 257 DYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 293
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 51.2 bits (123), Expect = 3e-08
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 76 TLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
L+ + + RQ+ G+ Y+ VH DL N + V + +KI DFGL++ I
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCL-VGE-NMVVKIADFGLSRNIYSA 227
Query: 136 HPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
+ + IP PE I Y ESD+W+ GV
Sbjct: 228 DYYKA--DGNDAIPIRWMPPESIFYNRYTTESDVWAYGV 264
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 118
Score = 47.8 bits (114), Expect = 8e-08
Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSESIGG 63
G+PD P+ + + TS+ ++W P + + GY VE + L+
Sbjct: 15 AGVPDTPTRLVFSALGPTSLRVSWQEPRCERP--LQGYSVEYQLLNGGELHRLNIPNPA 71
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 49.6 bits (119), Expect = 9e-08
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 12/108 (11%)
Query: 67 FERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDF 126
F + TL+ + + F + G+DY+ + +H DL NI+ V ++ KI DF
Sbjct: 129 FAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL-VG-ENYVAKIADF 186
Query: 127 GLAQKINPDHPPRVLFGTPEFIP-----PEIINYEPIGIESDMWSIGV 169
GL++ + T +P E +NY SD+WS GV
Sbjct: 187 GLSRGQE-----VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGV 229
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A
{Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Length = 205
Score = 48.9 bits (117), Expect = 1e-07
Identities = 14/81 (17%), Positives = 24/81 (29%), Gaps = 16/81 (19%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQP--WVELSESIGG 63
+ +P+ P G++ I W D I Y ++ P W E +
Sbjct: 3 QDVPNAPKL-TGITCQADKAEIHWE-QQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPN 60
Query: 64 GELFE------------RVVA 72
+ RV+A
Sbjct: 61 TDSSFVVQMSPWANYTFRVIA 81
Score = 42.0 bits (99), Expect = 3e-05
Identities = 10/51 (19%), Positives = 16/51 (31%), Gaps = 3/51 (5%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPP-YDGGCMITGYVVEMK--AGTQPWVE 56
P +G ++VI+W+ P + Y V K W
Sbjct: 105 FKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWEN 155
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 119
Score = 46.6 bits (111), Expect = 2e-07
Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Query: 5 SEGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE-MKAGTQPWVELSESIGG 63
S +P P + V + V ++W PP + I + V + G L+ + G
Sbjct: 14 SSVLPSAPRDVVPVLVSSRFVRLSW-RPPAEAKGNIQTFTVFFSREGDNRERALNTTQPG 72
Query: 64 GELFE 68
Sbjct: 73 SLQLT 77
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding;
2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
PDB: 2ibb_A
Length = 214
Score = 47.5 bits (113), Expect = 3e-07
Identities = 10/46 (21%), Positives = 16/46 (34%)
Query: 3 FESEGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK 48
+ P + T+VV+ WS +ITGY +
Sbjct: 110 GAALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYR 155
Score = 45.6 bits (108), Expect = 2e-06
Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 3/70 (4%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK--AGTQPWVELSESIGGGEL 66
PP+ + SV++ W P + G I + V+ + + W +++I G+
Sbjct: 2 TYPPTPPNVTRLSDESVMLRW-MVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP 60
Query: 67 FERVVADDFT 76
Sbjct: 61 KWNSELGKSF 70
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 116
Score = 45.8 bits (109), Expect = 3e-07
Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 5 SEGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE-MKAGTQPWVELS 58
+P P + + TS+ +TW +P G I Y + M+ GT ++
Sbjct: 14 EVQLPGPAPNLRAYAASPTSITVTWETPVSGNG-EIQNYKLYYMEKGTDKEQDVD 67
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91,
TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 110
Score = 45.5 bits (108), Expect = 5e-07
Identities = 11/59 (18%), Positives = 21/59 (35%), Gaps = 3/59 (5%)
Query: 4 ESEGIPDPPSGAIGVSN-NRTSVVITWSSPPYDGGCMITGYVVEMKAGTQ-PWVELSES 60
S +P P + + S ++W P GY++E+ G + E+
Sbjct: 5 SSGPVPATPILQLEECCTHNNSATLSWK-QPPLSTVPADGYILELDDGNGGQFREVYVG 62
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein,
leukocyte antigen related, structural genomics, NPPSFA;
NMR {Homo sapiens} SCOP: b.1.2.1
Length = 107
Score = 44.7 bits (106), Expect = 9e-07
Identities = 9/58 (15%), Positives = 18/58 (31%), Gaps = 3/58 (5%)
Query: 5 SEGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSESI 61
P P+ I + + ++ W P G + GY ++ A +
Sbjct: 4 GSSGPGRPTMMI-STTAMNTALLQWHPPKELPG-ELLGYRLQYCRADEARPNTIDFGK 59
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 116
Score = 44.7 bits (106), Expect = 9e-07
Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSES 60
+PD PS + V ++++W+ PP + ++ GY++ G+ +
Sbjct: 15 SQVPDQPSS-LHVRPQTNCIIMSWT-PPLNPNIVVRGYIIGYGVGSPYAETVRVD 67
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein
1, midin-2, ring finger protein 60, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 127
Score = 44.5 bits (105), Expect = 1e-06
Identities = 12/74 (16%), Positives = 29/74 (39%), Gaps = 6/74 (8%)
Query: 8 IPDPPSGAIGVSN-NRTSVVITWSSPPYDGGCMITGYVVEMK--AGTQPWVELSESIGGG 64
P+PPS + + ++ + W S I+ Y ++ G ++ L S+
Sbjct: 15 APNPPSIREELCTASHDTITVHWISD---DEFSISSYELQYTIFTGQANFISLYNSVDSW 71
Query: 65 ELFERVVADDFTLT 78
+ + + +T+
Sbjct: 72 MIVPNIKQNHYTVH 85
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein,
leukocyte antigen related, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 106
Score = 43.8 bits (104), Expect = 2e-06
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSESIGG 63
P PP + TSV +TW S +T Y ++ + AGT+ + + +
Sbjct: 5 SSGPKPPIDLVVTETTATSVTLTWDSG---NSEPVTYYGIQYRAAGTEGPFQEVDGVAT 60
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related
receptor containing LDLR class A repeats, sorla; NMR
{Homo sapiens}
Length = 108
Score = 43.2 bits (102), Expect = 3e-06
Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 6 EGIPDPPSG--AIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELS 58
PD P +V W+ P + G +I Y+VE +G++ W
Sbjct: 5 SSGPDAPRNLQLSLPREAEGVIVGHWAPPIHTHG-LIREYIVEYSRSGSKMWASQR 59
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 106
Score = 43.0 bits (102), Expect = 3e-06
Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE-MKAGTQPWVE 56
P P VS + TS++ITW P Y G + GY + + T
Sbjct: 5 SSGPGPVENLQAVSTSPTSILITWEPPAYANG-PVQGYRLFCTEVSTGKEQN 55
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III
module, beta-sheet sandwich, cell membrane,
glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Length = 114
Score = 42.9 bits (101), Expect = 4e-06
Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 4 ESEGIPDPPS--GAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPW 54
E+E PS G ++ S ++ + DGG I Y+V+ ++ +
Sbjct: 1 EAEASMREPSPPSIHGQPSSGKSFKLSIT-KQDDGGAPILEYIVKYRSKDKED 52
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken
structural genomics/proteomics initiative, RSGI; NMR
{Homo sapiens} SCOP: b.1.2.1
Length = 130
Score = 42.0 bits (99), Expect = 1e-05
Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESI 61
+ +P PP G + TSV + W P G +I Y + + T + +
Sbjct: 25 DDVPGPPMGILFPEVRTTSVRLIWQPPAAPNG-IILAYQITHRLNTTTANTATVEV 79
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma,
epidermolysis bullosa, alternative splicing, disease
mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo
sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Length = 234
Score = 42.1 bits (99), Expect = 3e-05
Identities = 10/54 (18%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSE 59
+ +P P + T ++W+ P G IT Y V +
Sbjct: 96 QEVPSEPGRLAFNVVSSTVTQLSWAEPAETNG-EITAYEVCYGLVNDDNRPIGP 148
Score = 32.8 bits (75), Expect = 0.036
Identities = 7/51 (13%), Positives = 11/51 (21%), Gaps = 6/51 (11%)
Query: 6 EGIP-DPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE-MKAGTQPW 54
+ P + + W P GY V+ G
Sbjct: 2 SHMDLGAPQNPNAKAAGSRKIHFNWLPPSGK----PMGYRVKYWIQGDSES 48
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane,
disulfide bond, glycoprotein, immunoglobulin domain,
membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A
{Homo sapiens}
Length = 589
Score = 41.9 bits (98), Expect = 5e-05
Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 4/76 (5%)
Query: 1 MDFESEGIPDPPSG--AIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKA-GTQPWVEL 57
D + P+PP I + + +TW+ P +I Y ++ + W ++
Sbjct: 191 FDPVYKVKPNPPHNLSVINSEELSSILKLTWT-NPSIKSVIILKYNIQYRTKDASTWSQI 249
Query: 58 SESIGGGELFERVVAD 73
V D
Sbjct: 250 PPEDTASTRSSFTVQD 265
Score = 38.8 bits (90), Expect = 6e-04
Identities = 6/52 (11%), Positives = 11/52 (21%), Gaps = 1/52 (1%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPP-YDGGCMITGYVVEMKAGTQPWVE 56
+ P + V+ W P I Y + +
Sbjct: 493 QAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETA 544
Score = 35.4 bits (81), Expect = 0.007
Identities = 8/56 (14%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Query: 5 SEGIPDPPSGAIGVSNNRTSVVITWSS-PPYDGGCMITGYVVEMKAGTQPWVELSE 59
S+ + +V + W + PP++ I Y V + +
Sbjct: 304 SKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTV 359
Score = 34.6 bits (79), Expect = 0.013
Identities = 5/43 (11%), Positives = 12/43 (27%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK 48
+ P + + + W++P I + V
Sbjct: 397 DFQATHPVMDLKAFPKDNMLWVEWTTPRESVKKYILEWCVLSD 439
Score = 33.8 bits (77), Expect = 0.024
Identities = 6/57 (10%), Positives = 17/57 (29%), Gaps = 2/57 (3%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGE 65
P+ P + N + W + + T + ++ + T + +
Sbjct: 103 PEKPKNLSCIVNEGKKMRCEW-DGGRETH-LETNFTLKSEWATHKFADCKAKRDTPT 157
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase;
endopeptidase activity, protein kinase activity; HET:
TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A*
2vwb_A*
Length = 540
Score = 41.5 bits (98), Expect = 5e-05
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Query: 67 FERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDF 126
+ D + +I E V +H+N+++H DL N + IIDF
Sbjct: 418 MSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDKDLY----IIDF 473
Query: 127 GLAQ 130
GL +
Sbjct: 474 GLGK 477
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP,
manganese, transferase; HET: ADP; 1.89A {Archaeoglobus
fulgidus} PDB: 1zp9_A* 1ztf_A*
Length = 258
Score = 41.2 bits (96), Expect = 7e-05
Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 8/81 (9%)
Query: 59 ESIGGGELFERVVADD-FTLTERDCVLFLRQICEGVDYMH-RNNIVHLDLKPENIMCVSR 116
E IG EL + + L E D + E V ++ +VH DL NIM
Sbjct: 148 EFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMY--- 204
Query: 117 TSHHIKIIDFGLAQKINPDHP 137
+ ID G Q + HP
Sbjct: 205 -IDKVYFIDMG--QAVTLRHP 222
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera
phosphorylation, transmembrane, tyrosine-protein kinase,
glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB:
2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Length = 536
Score = 41.3 bits (96), Expect = 8e-05
Identities = 8/43 (18%), Positives = 12/43 (27%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK 48
P + V + W+ P GG Y V +
Sbjct: 330 CTRPPSAPHYLTAVGMGAKVELRWTPPQDSGGREDIVYSVTCE 372
Score = 40.9 bits (95), Expect = 9e-05
Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK 48
P + TS+ ++WS PP + Y V +
Sbjct: 438 SINQTEPPKVRLEGRSTTSLSVSWSIPPPQQS-RVWKYEVTYR 479
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken
structural genomics/proteomics initiative, RSGI; NMR
{Homo sapiens} SCOP: b.1.2.1
Length = 119
Score = 39.3 bits (92), Expect = 9e-05
Identities = 12/61 (19%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGE 65
E +P P TS+ ++W P G ++TGY + + + ++ +
Sbjct: 15 EDVPGPVGHLSFSEILDTSLKVSWQEPGEKNG-ILTGYRISWEEYNRTNTRVTHYLPNVT 73
Query: 66 L 66
L
Sbjct: 74 L 74
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase,
glycoprotein, receptor protei tyrosine phosphatase, cell
adhesion; HET: NAG; 3.10A {Homo sapiens}
Length = 731
Score = 40.9 bits (95), Expect = 1e-04
Identities = 10/50 (20%), Positives = 17/50 (34%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELS 58
P P + S T + I ++ +G I VE + W +
Sbjct: 262 PVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQ 311
Score = 40.1 bits (93), Expect = 2e-04
Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Query: 6 EGIPD-PPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGG 64
E +P P+ +I S + + W P G +IT Y + KA + E+ S G
Sbjct: 459 EDLPGAVPTESIQGSTFEEKIFLQWREPTQTYG-VITLYEITYKAVSSFDPEIDLSNQSG 517
Query: 65 ELFERVVADDFTLT 78
+ + F
Sbjct: 518 RVSKLGNETHFLFF 531
Score = 37.1 bits (85), Expect = 0.002
Identities = 7/41 (17%), Positives = 9/41 (21%), Gaps = 1/41 (2%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGG-CMITGYVVEMK 48
P V + I W Y+ C V
Sbjct: 360 MRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYC 400
Score = 33.6 bits (76), Expect = 0.026
Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWS-SPPYDGGCMITGYVVEMKAGTQPWVELSESI 61
P P+ + N+T +T P + G ++ Y + ++ + + I
Sbjct: 563 ISAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEERPRRTKKTTEI 619
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2,
NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: b.1.2.1
Length = 108
Score = 39.0 bits (91), Expect = 1e-04
Identities = 9/47 (19%), Positives = 14/47 (29%), Gaps = 1/47 (2%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQ 52
P VS S+ ++W P G +I Y +
Sbjct: 5 SSGPSTVPIMHQVSATMRSITLSWPQPEQPNG-IILDYEIRYYEKEH 50
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase
receptor HTK, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 109
Score = 39.0 bits (91), Expect = 1e-04
Identities = 8/41 (19%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 46
P S ++ +S+ + W+ P G + Y V+
Sbjct: 5 SSGPPAVSDIRVTRSSPSSLSLAWAVPRAPSG-AVLDYEVK 44
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 111
Score = 38.5 bits (90), Expect = 2e-04
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 46
+ P +TSV + W P G +I Y ++
Sbjct: 8 QAAPSQVVVIRQERAGQTSVSLLWQEPEQPNG-IILEYEIK 47
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone
receptor/immune system complex; 3.80A {Homo sapiens}
SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1
PDB: 3loh_E
Length = 897
Score = 40.3 bits (93), Expect = 2e-04
Identities = 10/71 (14%), Positives = 17/71 (23%), Gaps = 1/71 (1%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGELFE 68
D V + W P G +I Y V + + L ++ L
Sbjct: 793 DDIVGPVTHEIFENNVVHLMWQEPKEPNG-LIVLYEVSYRRYGDEELHLCDTRKHFALER 851
Query: 69 RVVADDFTLTE 79
+
Sbjct: 852 GCRLRGLSPGN 862
Score = 38.7 bits (89), Expect = 6e-04
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 5 SEGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQ 52
P P I VSN+ + +++ W P G IT Y+V + +
Sbjct: 591 DATNPSVPLDPISVSNSSSQIILKWKPPSDPNG-NITHYLVFWERQAE 637
Score = 29.9 bits (66), Expect = 0.48
Identities = 3/28 (10%), Positives = 11/28 (39%)
Query: 21 NRTSVVITWSSPPYDGGCMITGYVVEMK 48
+ +++ W + G+++ K
Sbjct: 481 SFDKILLRWEPYWPPDFRDLLGFMLFYK 508
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 40.2 bits (93), Expect = 2e-04
Identities = 17/103 (16%), Positives = 35/103 (33%), Gaps = 27/103 (26%)
Query: 54 WVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMC 113
W ++ + VV + L +Q E + ++L+LK +
Sbjct: 396 WFDVIK-----SDVMVVVNKLHKYS-----LVEKQPKESTISIPS---IYLELKVK---L 439
Query: 114 VSRTSHHIKIID-FGLAQKINPDHPPRVLFGTPEFIPPEIINY 155
+ + H I+D + + + + D IPP + Y
Sbjct: 440 ENEYALHRSIVDHYNIPKTFDSDD----------LIPPYLDQY 472
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn
complex, rRNA processing, transferase; HET: ADP; 1.75A
{Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB:
1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Length = 282
Score = 39.5 bits (92), Expect = 2e-04
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
Query: 85 FLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHP 137
L I E V + IVH DL N++ + I IIDF Q +
Sbjct: 198 VLDMILEEVAKFYHRGIVHGDLSQYNVLV---SEEGIWIIDFP--QSVEVGEE 245
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin
type III domain containing protein, structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 115
Score = 38.1 bits (89), Expect = 2e-04
Identities = 10/54 (18%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE-MKAGTQPWVELS 58
G+P P + TS++++W+ P D I Y + ++
Sbjct: 15 TGVPGQPLNFKAEPESETSILLSWTPPRSDT---IANYELVYKDGEHGEEQRIT 65
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain,
fibron type III, cell adhesion; 1.80A {Homo sapiens}
PDB: 1x5k_A
Length = 211
Score = 39.0 bits (91), Expect = 3e-04
Identities = 9/49 (18%), Positives = 14/49 (28%), Gaps = 3/49 (6%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPP---YDGGCMITGYVVEMKAGTQPW 54
PP G + ++ ITW+ + Y V K
Sbjct: 5 MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPAN 53
Score = 37.1 bits (86), Expect = 0.001
Identities = 12/72 (16%), Positives = 23/72 (31%), Gaps = 5/72 (6%)
Query: 6 EGIP-DPPSG--AIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVELSESI 61
E +P PP + ++++ W P G ITGY++ +
Sbjct: 102 ELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANG-KITGYIIYYSTDVNAEIHDWVIEP 160
Query: 62 GGGELFERVVAD 73
G + +
Sbjct: 161 VVGNRLTHQIQE 172
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 126
Score = 38.2 bits (89), Expect = 3e-04
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 2 DFESEGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVE 56
D + +P+ PS + V TS+V++W+ PP + ++ GY + G+
Sbjct: 21 DLDETRVPEVPSS-LHVRPLVTSIVVSWT-PPENQNIVVRGYAIGYGIGSPHAQT 73
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative
splicing, cell adhesion, coiled coil, EGF-like domain,
extracellular matrix; 2.40A {Homo sapiens}
Length = 100
Score = 37.4 bits (87), Expect = 3e-04
Identities = 15/57 (26%), Positives = 21/57 (36%), Gaps = 6/57 (10%)
Query: 10 DPPSGAIGVSN-NRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGE 65
PP I V+N T+ V+TW P I G +V P E + +
Sbjct: 3 QPPFN-IKVTNITLTTAVVTWQPPILP----IEGILVTFGRKNDPSDETTVDLTSSI 54
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic,
protein-protein SH2 domain, ATP-binding,
phosphoprotein; 2.10A {Homo sapiens}
Length = 103
Score = 37.4 bits (87), Expect = 3e-04
Identities = 8/57 (14%), Positives = 16/57 (28%), Gaps = 1/57 (1%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGE 65
P+ V TS+ I+W + + Y + ++ G
Sbjct: 8 SSVPTKLEVVDATPTSLKISWDAYYSSWQ-NVKYYRITYGETGGDSPVQEFTVPGYY 63
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 114
Score = 37.0 bits (86), Expect = 6e-04
Identities = 9/40 (22%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Query: 9 PDPPSG--AIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 46
P I +V+++W P G IT Y++
Sbjct: 9 TSAPKDLTVITREGKPRAVIVSWQPPLEANG-KITAYILF 47
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic,
protein-protein SH2 domain, ATP-binding,
phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A
1ttg_A 3rzw_A 1fna_A
Length = 101
Score = 36.3 bits (84), Expect = 8e-04
Identities = 8/58 (13%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Query: 8 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGE 65
+ P+ V+ TS++I+W P + Y + ++
Sbjct: 4 VSSVPTKLEVVAATPTSLLISW-DAPMSSS-SVYYYRITYGETGGNSPVQEFTVPYSS 59
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin
type III domain, alternative cell membrane, disulfide
bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Length = 290
Score = 37.9 bits (88), Expect = 0.001
Identities = 7/54 (12%), Positives = 14/54 (25%), Gaps = 1/54 (1%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGG-CMITGYVVEMKAGTQPWVELS 58
+ P + V+ W P D I Y + + ++
Sbjct: 194 QAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVN 247
Score = 37.1 bits (86), Expect = 0.002
Identities = 11/60 (18%), Positives = 20/60 (33%), Gaps = 9/60 (15%)
Query: 10 DPPSGAIGV--------SNNRTSVVITWSS-PPYDGGCMITGYVVEMKAGTQPWVELSES 60
D PS A + +V + W + PP++ I Y V + + +
Sbjct: 2 DRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVN 61
Score = 37.1 bits (86), Expect = 0.002
Identities = 9/76 (11%), Positives = 22/76 (28%), Gaps = 11/76 (14%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGE 65
+ P + + + W++P + Y++E W LS+
Sbjct: 98 DFQATHPVMDLKAFPKDNMLWVEWTTPRE----SVKKYILE-------WCVLSDKAPCIT 146
Query: 66 LFERVVADDFTLTERD 81
+++ R
Sbjct: 147 DWQQEDGTVHRTYLRG 162
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 37.6 bits (86), Expect = 0.001
Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 4/84 (4%)
Query: 50 GTQPWVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRN-NIVHLDLKP 108
Q ++ + E GG E++ +L +L Q+ + + H DL
Sbjct: 134 DDQLFI-VLEFEFGGIDLEQMRTKLSSLATAKSILH--QLTASLAVAEASLRFEHRDLHW 190
Query: 109 ENIMCVSRTSHHIKIIDFGLAQKI 132
N++ + + G + I
Sbjct: 191 GNVLLKKTSLKKLHYTLNGKSSTI 214
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY
acidic protein fold, fibronectin type III fold, hormone-
growth factor complex; NMR {Homo sapiens}
Length = 680
Score = 37.6 bits (86), Expect = 0.001
Identities = 12/70 (17%), Positives = 25/70 (35%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGELFE 68
P+ S + V + + +W + +TG+ V T + S +
Sbjct: 528 PENLSASFIVQDVNITGHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQ 587
Query: 69 RVVADDFTLT 78
+ +D + LT
Sbjct: 588 ILPSDHYVLT 597
Score = 35.7 bits (81), Expect = 0.006
Identities = 6/40 (15%), Positives = 12/40 (30%), Gaps = 1/40 (2%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK 48
P + + W S ++ YVV+ +
Sbjct: 161 LKPRKELRFTELQSGQLEVKW-SSKFNISIEPVIYVVQRR 199
Score = 34.9 bits (79), Expect = 0.010
Identities = 9/45 (20%), Positives = 15/45 (33%), Gaps = 6/45 (13%)
Query: 9 PDPP-----SGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK 48
P P + + S+ +V I W P + + Y V
Sbjct: 267 PPAPANLRLANSTVNSDGSVTVTIVW-DLPEEPDIPVHHYKVFWS 310
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A
{Homo sapiens} PDB: 1fnh_A
Length = 290
Score = 36.7 bits (85), Expect = 0.002
Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE-MKAGTQPWVE 56
PP A T++ I+W + ITG+ V+ + A Q ++
Sbjct: 113 VSPPRRARVTDATETTITISWRTKTET----ITGFQVDAVPANGQTPIQ 157
Score = 34.4 bits (79), Expect = 0.012
Identities = 9/57 (15%), Positives = 17/57 (29%), Gaps = 4/57 (7%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGE 65
P+ TS+ W+ P +TGY V + + ++
Sbjct: 21 IPAPTDLKFTQVTPTSLSAQWTPPNVQ----LTGYRVRVTPKEKTGPMKEINLAPDS 73
Score = 34.4 bits (79), Expect = 0.012
Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGEL 66
D PS ++ S++++W P ITGY+++ + P E+ G
Sbjct: 202 IDAPSNLRFLATTPNSLLVSWQPPRAR----ITGYIIKYEKPGSPPREVVPRPRPGVT 255
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 36.8 bits (86), Expect = 0.002
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 16/87 (18%)
Query: 92 GVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD----H-PPRVLFGTPE 146
G++++H N+ +H D+K NI+ + KI DFGLA + + R++ GT
Sbjct: 145 GINFLHENHHIHRDIKSANILLDE--AFTAKISDFGLA-RASEKFAQTVMTSRIV-GTTA 200
Query: 147 FIPPEIINYEPIG---IESDMWSIGVI 170
++ PE + G +SD++S GV+
Sbjct: 201 YMAPEALR----GEITPKSDIYSFGVV 223
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK
protein, structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Mus
musculus} SCOP: b.1.2.1
Length = 120
Score = 35.3 bits (81), Expect = 0.003
Identities = 3/59 (5%), Positives = 10/59 (16%), Gaps = 5/59 (8%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-----AGTQPWVELSESIG 62
P + S+ + W + + + +
Sbjct: 16 LSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYA 74
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130,
interleukine 6 R beta subunit, signaling protein; 2.00A
{Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Length = 215
Score = 36.1 bits (83), Expect = 0.003
Identities = 6/55 (10%), Positives = 16/55 (29%), Gaps = 2/55 (3%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGG 63
P+ P + N + W + T + ++ + T + +
Sbjct: 8 PEKPKNLSCIVNEGKKMRCEW-DGGRETHL-ETNFTLKSEWATHKFADCKAKRDT 60
Score = 31.5 bits (71), Expect = 0.089
Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 4/76 (5%)
Query: 1 MDFESEGIPDPPSG--AIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKA-GTQPWVEL 57
D + P+PP I + + +TW + P +I Y ++ + W ++
Sbjct: 96 FDPVYKVKPNPPHNLSVINSEELSSILKLTW-TNPSIKSVIILKYNIQYRTKDASTWSQI 154
Query: 58 SESIGGGELFERVVAD 73
V D
Sbjct: 155 PPEDTASTRSSFTVQD 170
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy,
decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo
sapiens} PDB: 3lb6_D*
Length = 380
Score = 35.9 bits (82), Expect = 0.005
Identities = 18/127 (14%), Positives = 39/127 (30%), Gaps = 9/127 (7%)
Query: 4 ESEGIPDPPSG-AIGVSNNRTSVVITWSSPPYD--GGCMITGYVVEMK-AGTQPW----V 55
++E +PP I + + W P Y ++ + G++ W
Sbjct: 27 DTEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSETWKTIIT 86
Query: 56 ELSESIGGGELFERVVADDFTLTERDCVLF-LRQICEGVDYMHRNNIVHLDLKPENIMCV 114
+ G +L + + A TL C Q + + +++ CV
Sbjct: 87 KNLHYKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCV 146
Query: 115 SRTSHHI 121
++
Sbjct: 147 YYNWQYL 153
Score = 31.3 bits (70), Expect = 0.13
Identities = 9/59 (15%), Positives = 18/59 (30%)
Query: 2 DFESEGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSES 60
++ P PP + + + WS P Y +E++ V +
Sbjct: 231 QLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDDTTLVTATVE 289
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains
of fibronectin-III domains, FOU fibronectin-III domains
PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens}
SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A*
3cxe_A* 1egj_A* 1c8p_A
Length = 419
Score = 35.7 bits (81), Expect = 0.005
Identities = 8/48 (16%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVE 56
PPS + V+ + S + W + + + ++ + T W +
Sbjct: 322 MAPPS--LQVTKDGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKD 367
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 115
Score = 34.3 bits (79), Expect = 0.006
Identities = 9/50 (18%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELS 58
PD P+ ++ V+ W P + Y +++ A P ++
Sbjct: 8 PDGPTQLRALNLTEGFAVLHWKPPQNP----VDTYDIQVTAPGAPPLQAE 53
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 105
Score = 33.6 bits (77), Expect = 0.007
Identities = 8/50 (16%), Positives = 16/50 (32%), Gaps = 4/50 (8%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELS 58
+ P + ++TW+ PP GY++ E+
Sbjct: 8 LEAPRDLEAKEVTPRTALLTWTEPPVR----PAGYLLSFHTPGGQTQEIL 53
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein;
2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Length = 368
Score = 35.2 bits (81), Expect = 0.007
Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGE 65
PP+ + ++ +TW+ PP +T ++V SI +
Sbjct: 95 VPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELSISPSD 148
Score = 35.2 bits (81), Expect = 0.008
Identities = 11/52 (21%), Positives = 20/52 (38%), Gaps = 5/52 (9%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMK-AGTQPWVE 56
+ D P V+ TS++I+W +P + Y + G V+
Sbjct: 273 STVSDVPRDLEVVAATPTSLLISWDAPAVT----VRYYRITYGETGGNSPVQ 320
Score = 31.3 bits (71), Expect = 0.14
Identities = 10/58 (17%), Positives = 16/58 (27%), Gaps = 4/58 (6%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGEL 66
D P+G S + W +P ITGY + + +
Sbjct: 186 LDSPTGIDFSDITANSFTVHWIAPRAT----ITGYRIRHHPEHFSGRPREDRVPHSRN 239
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer,
neovascularization, cell adhesion, protein binding,
oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Length = 203
Score = 34.4 bits (79), Expect = 0.009
Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGE 65
PP+ + ++ +TW+ PP +T ++V SI +
Sbjct: 114 VPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELSISPSD 167
Score = 32.9 bits (75), Expect = 0.037
Identities = 8/55 (14%), Positives = 18/55 (32%), Gaps = 3/55 (5%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGG 63
P+ V +S+ + W+ I GY + + A + + +
Sbjct: 23 VPQPTDLSFVDITDSSIGLRWTPLN---SSTIIGYRITVVAAGEGIPIFEDFVDS 74
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III
domain, oncofetal splice VARI extra-domain B, EIIIB,
ED-B, angiogenesis, integrin; 2.40A {Homo sapiens}
Length = 375
Score = 34.8 bits (80), Expect = 0.010
Identities = 10/58 (17%), Positives = 16/58 (27%), Gaps = 4/58 (6%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGEL 66
D P+G S + W +P ITGY + + +
Sbjct: 278 LDSPTGIDFSDITANSFTVHWIAPR----ATITGYRIRHHPEHFSGRPREDRVPHSRN 331
Score = 33.6 bits (77), Expect = 0.026
Identities = 7/57 (12%), Positives = 17/57 (29%), Gaps = 3/57 (5%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGE 65
+ V +S+ + W+ I GY + + A + + +
Sbjct: 96 VPQLTDLSFVDITDSSIGLRWTPLN---SSTIIGYRITVVAAGEGIPIFEDFVDSSV 149
Score = 32.5 bits (74), Expect = 0.066
Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGE 65
PP+ + ++ +TW+ PP +T ++V SI +
Sbjct: 187 VPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELSISPSD 240
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 35.0 bits (80), Expect = 0.010
Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 46/154 (29%)
Query: 11 PPSGAIGVS--NNRTSVVITWSSPPYD--GGCMITGYVVEMKAGT---QPWVELSE-SIG 62
P + +S N ++V++ PP G + + + KA + Q + SE +
Sbjct: 361 PAGKQVEISLVNGAKNLVVS--GPPQSLYGLNL---TLRKAKAPSGLDQSRIPFSERKLK 415
Query: 63 GGELF--------------------ERVVADDFTLTERDCVLFLRQICEGVDY-MHRNNI 101
F + +V ++ + +D + + +G D + +I
Sbjct: 416 FSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSI 475
Query: 102 VHLDLKPENI-MCV-------SRTSHHIKIIDFG 127
+ I + V + +H I+DFG
Sbjct: 476 SE-RIVDCIIRLPVKWETTTQFKATH---ILDFG 505
Score = 32.7 bits (74), Expect = 0.057
Identities = 32/190 (16%), Positives = 57/190 (30%), Gaps = 69/190 (36%)
Query: 1 MDFESEGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQP------- 53
M FE+ + I N S T+ S G T + TQP
Sbjct: 1691 MIFETIVDGKLKTEKIFKEINEHSTSYTFRSE--KGLLSATQF-------TQPALTLMEK 1741
Query: 54 --WVELSE-------------SIG--------GGEL-FERVVADDFTLTERDCVLFLR-- 87
+ +L S+G + E +V V+F R
Sbjct: 1742 AAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVE----------VVFYRGM 1791
Query: 88 --QICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLFGTP 145
Q+ D + R+N + + P + S + ++ + + ++ T
Sbjct: 1792 TMQVAVPRDELGRSNYGMIAINPGR-VAASFSQEALQYVVERVGKR------------TG 1838
Query: 146 EFIPPEIINY 155
+ EI+NY
Sbjct: 1839 WLV--EIVNY 1846
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 34.5 bits (80), Expect = 0.011
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 88 QICEGV----DYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD 135
+IC G Y+H I+H D+K NI+ + KI DFG++ K +
Sbjct: 143 EICIGAARGLHYLHTRAIIHRDVKSINILLDE--NFVPKITDFGIS-KKGTE 191
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken
structural genomics/proteomics initiative, RSGI,
neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 117
Score = 33.3 bits (76), Expect = 0.011
Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPP-YDGGCMITGYVVEMKAGTQPWVELSES 60
+ P P G + + T V++ W + +TGY V + +Q V++ +
Sbjct: 15 KTPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLNT 70
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell
adhesion, coiled coil, EGF-like domain, extracellular
matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A
1ten_A
Length = 104
Score = 32.7 bits (75), Expect = 0.014
Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 6/58 (10%)
Query: 9 PDPPSGAIGVSN-NRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGE 65
D PS I V + T+ +ITW P + G+ + P + + E
Sbjct: 3 LDAPSQ-IEVKDVTDTTALITWMPPSQP----VDGFELTYGIKDVPGDRTTIDLTEDE 55
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein,
adnect antitumor, drug, engineered binding protein;
HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Length = 114
Score = 32.6 bits (74), Expect = 0.020
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 6/54 (11%)
Query: 7 GIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE--MKAGTQPWVELS 58
G+ D P V+ TS++I+W S Y + G P E +
Sbjct: 2 GVSDVPRDLEVVAATPTSLLISWDSGRGS----YQYYRITYGETGGNSPVQEFT 51
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 105
Score = 32.4 bits (74), Expect = 0.023
Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 4/62 (6%)
Query: 4 ESEGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGG 63
PPS S S+ ++W+ P + Y + + E S S+ G
Sbjct: 3 SGSSGRSPPSNLALASETPDSLQVSWTPPLGR----VLHYWLTYAPASGLGPEKSVSVPG 58
Query: 64 GE 65
Sbjct: 59 AR 60
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein,
leukocyte antigen related, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 103
Score = 32.3 bits (74), Expect = 0.023
Identities = 8/43 (18%), Positives = 11/43 (25%), Gaps = 4/43 (9%)
Query: 6 EGIPD-PPSGAIGVSNNRTSVVITWSSPPYDG--GCMITGYVV 45
P P ++ + W P G I Y V
Sbjct: 5 SSGPSGFPQNLHVTGLTTSTTELAWDPPVLAERNG-RIISYTV 46
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol,
hormone-growth complex; HET: CME EST; 2.95A {Homo
sapiens}
Length = 121
Score = 32.6 bits (74), Expect = 0.023
Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Query: 8 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGE 65
+ D P+ V+ TS++I+W +P + Y + ++ G +
Sbjct: 28 VSDVPTKLEVVAATPTSLLISWDAPAVT----VRYYRITYGETGGNSPVQEFTVPGSK 81
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 124
Score = 32.7 bits (75), Expect = 0.024
Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 6 EGIPD-PPSGAIGVSNNRTSVVITWSSPPYDG--GCMITGYVVEMKAGTQPWVELS 58
+P PP N S+ ++W PP G ITGY + + T+ +
Sbjct: 25 SDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNG-FITGYKIRHRKTTRRGEMET 79
>2dlh_A Receptor-type tyrosine-protein phosphatase delta;
protein-tyrosine phosphatase delta, R-PTP-delta,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 121
Score = 32.4 bits (74), Expect = 0.026
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 6 EGIP-DPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVV 45
E P P + T++++ W P G I GY V
Sbjct: 15 EQAPSSAPRDVQARMLSSTTILVQWKEPEEPNG-QIQGYRV 54
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 32.9 bits (76), Expect = 0.034
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 15/76 (19%)
Query: 87 RQIC----EGVDYMH---RNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPD---H 136
++I G+ Y+H I+H D+K NI+ + DFGLA K+ H
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILL--DEEFEAVVGDFGLA-KLMDYKDTH 190
Query: 137 -PPRVLFGTPEFIPPE 151
V GT I PE
Sbjct: 191 VTTAVR-GTIGHIAPE 205
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein,
leukocyte antigen related, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 134
Score = 32.0 bits (73), Expect = 0.042
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 6 EGIPD-PPSGAIGVSNNRTSVVITWSSPPYDG--GCMITGYVV 45
+ P PP + VS T+V ++W PP D G +IT Y V
Sbjct: 15 QSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNG-VITQYSV 56
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain,
carbohydrase, horizontal gene transfer, hydrolase; NMR
{Bacillus circulans} SCOP: b.1.2.1
Length = 88
Score = 31.1 bits (71), Expect = 0.046
Identities = 9/37 (24%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVV 45
P P+ + +S+ ++W++ + G +TGY V
Sbjct: 4 PTAPTNLASTAQTTSSITLSWTASTDNVG--VTGYDV 38
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated
oncogenes (CDON)binding...; fibronectin type III, FN3;
NMR {Mus musculus} SCOP: b.1.2.1
Length = 114
Score = 31.7 bits (72), Expect = 0.048
Identities = 7/41 (17%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSS-PPYDGGCMITGYVVEMK 48
P + N T++++ W P + I G+ + +
Sbjct: 9 VAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYR 49
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo
sapiens} SCOP: b.1.2.1
Length = 94
Score = 30.8 bits (70), Expect = 0.056
Identities = 14/56 (25%), Positives = 20/56 (35%), Gaps = 4/56 (7%)
Query: 10 DPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGE 65
D P G + S+ I W SP ++ Y V + EL + G E
Sbjct: 3 DRPKGLAFTDVDVDSIKIAWESPQ----GQVSRYRVTYSSPEDGIHELFPAPDGEE 54
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins,
protein-protein interactions, C-type lectin domain;
2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Length = 283
Score = 32.1 bits (73), Expect = 0.063
Identities = 11/57 (19%), Positives = 18/57 (31%), Gaps = 5/57 (8%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE-MKAGTQPWVELSESIGGG 64
D P S TS+ + W + + Y V + + E+ G G
Sbjct: 105 IDAPKNLRVGSRTATSLDLEWDNSEAE----AQEYKVVYSTLAGEQYHEVLVPKGIG 157
Score = 32.1 bits (73), Expect = 0.072
Identities = 8/50 (16%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELS 58
D P + +++ TS+ + W+ I Y + + E++
Sbjct: 197 LDSPRDLMVTASSETSISLIWTKASGP----IDHYRITFTPSSGISSEVT 242
Score = 30.5 bits (69), Expect = 0.22
Identities = 8/52 (15%), Positives = 17/52 (32%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSES 60
D P+ + + T + W+ P ++ Y + G + L
Sbjct: 15 IDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTTFRLQPP 66
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 123
Score = 31.4 bits (71), Expect = 0.064
Identities = 8/51 (15%), Positives = 16/51 (31%), Gaps = 3/51 (5%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGG---CMITGYVVEMKAGTQPWVE 56
PP G V+ +V ++W+ + Y V + +
Sbjct: 19 MLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAK 69
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular
matrix, adhesion, fusion protein, structural protein;
2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Length = 186
Score = 31.6 bits (72), Expect = 0.072
Identities = 7/50 (14%), Positives = 14/50 (28%), Gaps = 4/50 (8%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELS 58
D P T++ + W P Y + + + E+
Sbjct: 7 LDNPKDLEVSDPTETTLSLRWRRPVAK----FDRYRLTYVSPSGKKNEME 52
Score = 30.1 bits (68), Expect = 0.28
Identities = 8/48 (16%), Positives = 12/48 (25%), Gaps = 4/48 (8%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVE 56
P G S ++W+ P + Y V T
Sbjct: 95 VGSPKGISFSDITENSATVSWTPPR----SRVDSYRVSYVPITGGTPN 138
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER,
receptor tyrosine kinase mertk, FN3 domain, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 124
Score = 31.3 bits (71), Expect = 0.076
Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 9/62 (14%)
Query: 10 DPPSGA-----IGVSNNRTSVVITWSSPPYD--GGCMITGYVVEMK-AGTQPWVELSESI 61
PS A + ++ + +V I W PP G + GY + EL E +
Sbjct: 16 GAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDG-ELVGYRISHVWQSAGISKELLEEV 74
Query: 62 GG 63
G
Sbjct: 75 GQ 76
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor
complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1
b.1.2.1 b.1.2.1 PDB: 1p9m_A
Length = 303
Score = 32.1 bits (72), Expect = 0.076
Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 8 IPDPPSG--AIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKA-GTQPWVELSES 60
P+PP I + + +TW++P +I Y ++ + W ++
Sbjct: 199 KPNPPHNLSVINSEELSSILKLTWTNPSIKSV-IILKYNIQYRTKDASTWSQIPPE 253
Score = 27.1 bits (59), Expect = 3.2
Identities = 6/55 (10%), Positives = 16/55 (29%), Gaps = 2/55 (3%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGG 63
P+ P + N + W + T + ++ + T + +
Sbjct: 104 PEKPKNLSCIVNEGKKMRCEW-DGGRETHL-ETNFTLKSEWATHKFADCKAKRDT 156
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 104
Score = 30.6 bits (69), Expect = 0.087
Identities = 10/57 (17%), Positives = 16/57 (28%), Gaps = 5/57 (8%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGE 65
PP + +V +TW T Y+V + E + G
Sbjct: 9 LPPPRALTLAAVTPRTVHLTWQPSA-----GATHYLVRCSPASPKGEEEEREVQVGR 60
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites,
calcium, cell adhesion molecules, cell cycle cell LINE,
conserved sequence; 1.60A {Homo sapiens} PDB: 3d1m_C
3n1q_C 3n1m_C 3n1g_C 3n1p_C
Length = 102
Score = 30.4 bits (69), Expect = 0.091
Identities = 7/37 (18%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 11 PPSGAIGVSNNRTSVVITWSSPP--YDGGCMITGYVV 45
P A + + T +++ W+ P + I G+ +
Sbjct: 7 GPHIAYTEAVSDTQIMLKWTYIPSSNNNTP-IQGFYI 42
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like
modifier, S NOVO protein; 2.40A {Artificial gene}
Length = 97
Score = 30.1 bits (68), Expect = 0.11
Identities = 7/39 (17%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 8 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 46
+ P+ V+ TS++I+W + ++ Y +
Sbjct: 4 VSSVPTKLEVVAATPTSLLISWDASS--SS--VSYYRIT 38
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding
homology region (CHR), cell MEMB disease mutation,
glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo
sapiens}
Length = 483
Score = 31.7 bits (71), Expect = 0.12
Identities = 10/60 (16%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDG--GCMITGYVV-EMKAGTQPWVELSESIGGGE 65
PD P +++ ++ +W+ G T Y + E +G ++ +E+
Sbjct: 282 PDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGKYVRLKRAEAPTNES 341
Score = 29.8 bits (66), Expect = 0.43
Identities = 9/53 (16%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Query: 2 DFESEGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPW 54
+ + P P+ N T+V ++W P + + +E+K
Sbjct: 375 NITEKVYPHTPTSFKVKDINSTAVKLSW-HLPGNFAKINFLCEIEIKKSNSVQ 426
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus
design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Length = 98
Score = 30.1 bits (68), Expect = 0.13
Identities = 11/57 (19%), Positives = 20/57 (35%), Gaps = 4/57 (7%)
Query: 10 DPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGEL 66
D P+ + TS+ ++W+ P ITGY + P ++
Sbjct: 3 DAPTDLQVTNVTDTSITVSWTPPSAT----ITGYRITYTPSNGPGEPKELTVPPSST 55
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 132
Score = 30.4 bits (69), Expect = 0.15
Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 6/65 (9%)
Query: 6 EGIPD-PPSGAIGVSNNRTSVVITWSSPPYD---GGCMITGYVVEMKAGTQPWVELSESI 61
+P P N S++I W P G ITGY + + ++ +
Sbjct: 15 SDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNG--QITGYKIRYRKASRKSDVTETLV 72
Query: 62 GGGEL 66
G +L
Sbjct: 73 SGTQL 77
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII
domain, dscaml1 protein, structural genomics; NMR {Homo
sapiens} SCOP: b.1.2.1
Length = 122
Score = 30.0 bits (68), Expect = 0.16
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 6/44 (13%)
Query: 6 EGIPD-PPSGAIGVSNNRTSVVITWSSPPYD---GGCMITGYVV 45
E PD PP S+ +TW +P + G +I GY +
Sbjct: 12 EAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNG--VIRGYQI 53
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 119
Score = 29.6 bits (67), Expect = 0.23
Identities = 4/41 (9%), Positives = 13/41 (31%), Gaps = 4/41 (9%)
Query: 6 EGIPD-PPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVV 45
+ P P+ + + + + W ++ Y +
Sbjct: 15 QDAPSEAPTEVGVKVLSSSEISVHWEHVLEK---IVESYQI 52
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant
methionine recycling, refol transferase; HET: SR1 ADP;
1.90A {Arabidopsis thaliana}
Length = 420
Score = 30.3 bits (67), Expect = 0.31
Identities = 7/34 (20%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Query: 97 HRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQ 130
++H DL ++M T ++ID +
Sbjct: 230 RAQALIHGDLHTGSVMV---TQDSTQVIDPEFSF 260
>1df7_A DHFR, dihydrofolate reductase; structure-based inhibitor design,
folateanalogs, rossmann fold; HET: NDP MTX; 1.70A
{Mycobacterium tuberculosis} SCOP: c.71.1.1 PDB: 1dg5_A*
1dg7_A* 1dg8_A* 2cig_A*
Length = 159
Score = 29.8 bits (68), Expect = 0.32
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 21 NRTSVVITWSSPPYDG-GCMITGYVVEMKAGTQPWVELSESIGGGELFERV--VADDFTL 77
R +VV++ + G + G + E + WV IGGG+++ A +
Sbjct: 59 GRRNVVLS-RQADFMASGAEVVGSLEEALTSPETWV-----IGGGQVYALALPYATRCEV 112
Query: 78 TE 79
TE
Sbjct: 113 TE 114
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein;
NMR {Homo sapiens} PDB: 2h45_A
Length = 95
Score = 29.0 bits (65), Expect = 0.33
Identities = 8/40 (20%), Positives = 15/40 (37%), Gaps = 4/40 (10%)
Query: 7 GIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 46
G + +S V++W S ++G+ VE
Sbjct: 4 GSHLVATSESVTEITASSFVVSWVSASDT----VSGFRVE 39
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY
docking, cell adhesion, structural protein; NMR {Homo
sapiens}
Length = 201
Score = 29.6 bits (66), Expect = 0.38
Identities = 8/58 (13%), Positives = 18/58 (31%), Gaps = 4/58 (6%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGEL 66
P + +S V++W S ++G+ VE + + +
Sbjct: 112 PLVATSESVTEITASSFVVSWVSAS----DTVSGFRVEYELSEEGDEPQYLDLPSTAT 165
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin
type-III, beta-N-acetylglucosaminidase, cohesin,
hydrolase; 1.80A {Clostridium perfringens}
Length = 238
Score = 29.9 bits (66), Expect = 0.41
Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 46
+P N+ +V +TW+ P G + GY++
Sbjct: 151 VNPVRDFKASEINKKNVTVTWTEPETTEG--LEGYILY 186
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural
genomics, riken structural genomics/proteomics
initiative, RSGI, unknown function; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 137
Score = 29.2 bits (65), Expect = 0.45
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 2/76 (2%)
Query: 6 EGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGE 65
E + + +VV+TWS P V G + V +S + G+
Sbjct: 15 EALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYE--VLISSTGKDGK 72
Query: 66 LFERVVADDFTLTERD 81
V ++ +T D
Sbjct: 73 YKSVYVGEETNITLND 88
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold,
fibronectin type III, NG-CAM related cell adhesion
molecule, structural genomics; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 125
Score = 28.9 bits (65), Expect = 0.47
Identities = 10/44 (22%), Positives = 14/44 (31%), Gaps = 6/44 (13%)
Query: 6 EGIPD-PPSGAIGVSNNRTSVVITWSSPPYD---GGCMITGYVV 45
E +P P N T + W P G + GY +
Sbjct: 11 EDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRG--HLQGYRI 52
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 108
Score = 28.5 bits (64), Expect = 0.47
Identities = 7/39 (17%), Positives = 13/39 (33%), Gaps = 6/39 (15%)
Query: 9 PDPPSGAIGVSN-NRTSVVITWSSPPYDGGCMITGYVVE 46
PP +G S+ + + + W P + V
Sbjct: 8 LAPPRH-LGFSDVSHDAARVFWEGAPRP----VRLVRVT 41
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase,
aminoglycoside, phosphorylation, transferase-antibiotic
complex; HET: TOY; 1.80A {Enterococcus casseliflavus}
PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A*
3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A*
4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Length = 304
Score = 29.8 bits (67), Expect = 0.49
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 101 IVHLDLKPENIMCVSRTSHHIK-IIDFGLA 129
++H D ++I+ + I IIDFG A
Sbjct: 193 LIHNDFSSDHIL-FDTEKNTICGIIDFGDA 221
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R,
cytokine, glycoprotein, IM response, membrane,
phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens}
PDB: 3bpn_C*
Length = 314
Score = 29.5 bits (65), Expect = 0.50
Identities = 15/115 (13%), Positives = 31/115 (26%), Gaps = 5/115 (4%)
Query: 9 PDPPSGAIGVSN-NRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVEL-SESIGGGEL 66
PP + VS N +V+ TW+ P Y + + L
Sbjct: 3 TQPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQDKKIAPETRRSIEVPL 62
Query: 67 FERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHI 121
ER+ + + + E + + + C+ ++
Sbjct: 63 NERICLQVGSQCSTNESEKPSILVEKCISPPEGD---PESAVTELQCIWHNLSYM 114
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de
novo; 2.50A {Synthetic}
Length = 98
Score = 28.2 bits (63), Expect = 0.67
Identities = 8/57 (14%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
Query: 10 DPPSGAIGVSN-NRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGE 65
P + VS S+ ++W++P ++++ + + ++ ++ G E
Sbjct: 3 PAPKN-LVVSEVTEDSLRLSWTAPDAA----FDSFMIQYQESEKVGEAINLTVPGSE 54
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK,
fibronectin type III (FN3) domain, structural genomics,
NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Length = 107
Score = 28.2 bits (63), Expect = 0.70
Identities = 7/48 (14%), Positives = 14/48 (29%), Gaps = 2/48 (4%)
Query: 9 PDPPSGA--IGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPW 54
+ SG V + +TW+ Y + + + W
Sbjct: 8 AESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEW 55
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 113
Score = 28.3 bits (63), Expect = 0.71
Identities = 9/49 (18%), Positives = 13/49 (26%), Gaps = 3/49 (6%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGG---CMITGYVVEMKAGTQPW 54
PP G + ++ ITW+ Y V K
Sbjct: 9 MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPAN 57
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex;
HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1
b.1.2.1
Length = 247
Score = 29.0 bits (64), Expect = 0.72
Identities = 8/61 (13%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Query: 1 MDFESEGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKA-GTQPWVELSE 59
+ ++ IP P + + + + W++ + ++V+ + W E S
Sbjct: 129 LKLQNLVIPWAPENLTLHKLSESQLELNWNNRFLN---HCLEHLVQYRTDWDHSWTEQSV 185
Query: 60 S 60
Sbjct: 186 D 186
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle,
fibronectin domain, cytokine-cytokine REC complex; HET:
NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB:
3bpl_C* 3qb7_C* 3qaz_C*
Length = 199
Score = 28.6 bits (63), Expect = 0.82
Identities = 8/61 (13%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Query: 1 MDFESEGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKA-GTQPWVELSE 59
+ ++ IP P + + + + W++ + ++V+ + W E S
Sbjct: 91 LKLQNLVIPWAPENLTLHKLSESQLELNWNNRFLN---HCLEHLVQYRTDWDHSWTEQSV 147
Query: 60 S 60
Sbjct: 148 D 148
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface
receptor complex LIFR LIF, cytokine RE cytokine
complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Length = 488
Score = 28.8 bits (63), Expect = 1.0
Identities = 6/38 (15%), Positives = 11/38 (28%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE 46
D +NN TW +P + ++
Sbjct: 4 DDDDKDLKCTTNNMRVWDCTWPAPLGVSPGTVKDICIK 41
Score = 27.6 bits (60), Expect = 2.8
Identities = 11/58 (18%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Query: 8 IPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGGE 65
P P+ N T V +W P + + +E+ + +I G E
Sbjct: 386 APHDPTSLKVKDINSTVVTFSW-YLPGNFTKINLLCQIEICKANSKKEVRNATIRGAE 442
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic
cytokine, cytokine receptor class 1, complex
(cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1
b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Length = 227
Score = 28.1 bits (62), Expect = 1.2
Identities = 14/65 (21%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Query: 2 DFESEGIPDPPSG-AIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSES 60
+ D P G +++ VV+ W PP Y V++ AG
Sbjct: 115 HINEVVLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRVE 174
Query: 61 IGGGE 65
I G
Sbjct: 175 ILEGR 179
>2wnv_C C1Q chain C, complement C1Q subcomponent subunit C; immune system,
secreted, collagen, recognition, disulfide bond, innate
immunity; HET: NAG; 1.25A {Homo sapiens} PDB: 2jg8_C
2wnu_C* 2jg9_C* 1pk6_C
Length = 131
Score = 27.2 bits (60), Expect = 1.8
Identities = 5/50 (10%), Positives = 17/50 (34%)
Query: 15 AIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPWVELSESIGGG 64
+ + + VV G ++ ++ G + W+ +++
Sbjct: 65 CVLLYRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMV 114
>3dau_A Dihydrofolate reductase; oxidoreductase, pseudo-rossmann fold,
adenine nucleotide BIN domain, antibiotic resistance,
methotrexate resistance; HET: MTX NAP; 1.50A
{Escherichia coli} PDB: 1ddr_A* 1dds_A* 3k74_A 1ra9_A*
1dre_A* 1drh_A* 1dyi_A* 1dyh_A* 1jol_A* 1jom_A* 1ra1_A*
1dyj_A* 1ra3_A* 1ra8_A* 1ra2_A* 1rb2_A* 1rb3_A* 1rc4_A*
1rd7_A* 1re7_A* ...
Length = 159
Score = 27.1 bits (61), Expect = 2.3
Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 21/86 (24%)
Query: 3 FESEGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVE----MKAGTQPWVELS 58
+ES G P P R +++++ S P D V E + V
Sbjct: 47 WESIGRPLP---------GRKNIILS-SQPGTDDRVTWVKSVDEAIAACGDVPEIMV--- 93
Query: 59 ESIGGGELFERV--VADDFTLTERDC 82
IGGG ++E+ A LT D
Sbjct: 94 --IGGGRVYEQFLPKAQKLYLTHIDA 117
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase,
structural genomics CONS SGC, hemicholinium-3,
phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens}
PDB: 3lq3_A* 2ig7_A*
Length = 379
Score = 27.5 bits (60), Expect = 2.6
Identities = 13/78 (16%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 54 WVELSESIGGGELFERVVADDFTLTERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMC 113
+++ + + L E + + ++ +D + LR++ E H D++ NI+
Sbjct: 179 YLKQIQDLPPTGLPEMNLLEMYS--LKDEMGNLRKLLESTP--SPVVFCHNDIQEGNILL 234
Query: 114 VSRTSHH--IKIIDFGLA 129
+S + + ++DF +
Sbjct: 235 LSEPENADSLMLVDFEYS 252
>3cxe_C Granulocyte-macrophage colony-stimulating factor subunit alpha;
GM-CSF, receptor complex, dodecamer, disease mutation,
glyco membrane; HET: NAG BMA; 3.30A {Homo sapiens}
Length = 120
Score = 26.6 bits (58), Expect = 3.3
Identities = 8/24 (33%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Query: 10 DPPSGAIGVSNNRTSVVITWSSPP 33
+PPS + V N T ++ W P
Sbjct: 19 NPPSN-VTVRCNTTHCLVRWKQPR 41
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex,
transferase; HET: CPS ADP; 2.00A {Bacillus subtilis}
SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A*
2pup_A*
Length = 397
Score = 27.2 bits (59), Expect = 3.5
Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Query: 101 IVHLDLKPENIMCVSRTSHHIKIIDFGLA 129
++H DL +I + H K+ID A
Sbjct: 229 LIHGDLHTGSIFA---SEHETKVIDPEFA 254
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for
structural genomics of infec diseases, csgid; HET: MSE
ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A*
4dca_A* 3hav_A* 3ham_A*
Length = 320
Score = 26.7 bits (58), Expect = 4.2
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 97 HRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQ 130
+ +VH D N++ R + +IDFG
Sbjct: 205 YTPCLVHNDFSANNMIF--RNNRLFGVIDFGDFN 236
>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor
fold, fibronectin type III modules, helical bundle,
cytokine, ligand-receptor complex; HET: BGC; 2.55A
{Homo sapiens}
Length = 317
Score = 26.8 bits (58), Expect = 4.4
Identities = 9/54 (16%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Query: 4 ESEGIPDPPSGAIGVSNNRTSVVITWSSPPYDGGCMIT-GYVVEMKAGTQPWVE 56
+ + PP V++ W P + Y V++ A + E
Sbjct: 7 DEKISLLPPVNFTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDDYE 60
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer,
antibiotic resistance, transfer; HET: GDP; 1.70A
{Enterococcus gallinarum} PDB: 3tdv_A*
Length = 306
Score = 26.2 bits (57), Expect = 6.0
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 101 IVHLDLKPENIM--CVSRTSHHIKIIDFGLAQ 130
++H DL P++ + SR + IIDFG A
Sbjct: 192 LIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA 223
>3eo7_A Putative nitroreductase; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; HET: MSE FMN; 1.80A {Anabaena variabilis atcc
29413}
Length = 511
Score = 26.6 bits (58), Expect = 6.0
Identities = 8/78 (10%), Positives = 21/78 (26%), Gaps = 4/78 (5%)
Query: 103 HLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPPRVLF-GTPEFIPPEIINYEPIGIE 161
+ K + + + + ++ L Q++ D + + + Y
Sbjct: 398 YYAPKAQELRQIRFKNFRRELHFLCLGQELGRDAAAVIFHTSDLKSAIAQ---YGDRVYR 454
Query: 162 SDMWSIGVITYVLYLQCT 179
G + L L
Sbjct: 455 YLHMDAGHLGQRLNLAAI 472
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR
genomics, joint center for structural genomics, JCSG,
prote structure initiative; HET: MSE; 2.55A
{Mesorhizobium loti}
Length = 301
Score = 26.2 bits (57), Expect = 7.0
Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Query: 103 HLDLKPENIMCVSRTSHHIKIIDFGLAQKINP 134
H D EN + T + I+D+ + +P
Sbjct: 177 HCDPLCENFLD---TGERMWIVDWEYSGMNDP 205
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine
phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine
phosphatase receptor type J; NMR {Homo sapiens}
Length = 104
Score = 25.4 bits (55), Expect = 7.1
Identities = 7/46 (15%), Positives = 14/46 (30%), Gaps = 1/46 (2%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPPYDGGCMITGYVVEMKAGTQPW 54
V+ + TS+ + W + T Y + + T
Sbjct: 8 AIQVFDVTAVNISATSLTLIWKVSDNESSSNYT-YKIHVAGETDSS 52
>3t30_B Nucleoplasmin-2; beta-barrel jelly roll topology, histone
chaperone, H2A-H2B H3-H4 tetramer, oocytes and early
embryos, chaperone; 1.90A {Homo sapiens}
Length = 110
Score = 25.4 bits (55), Expect = 7.5
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 9/72 (12%)
Query: 79 ERDCVLFLRQICEGVDYMHRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLAQKINPDHPP 138
++ C L L IC G + V + K+ +A + P
Sbjct: 27 KQSCRLLLHTICLGEKAKEEMHRVEILPPANQ--------EDKKMQPVTIAS-LQASVLP 77
Query: 139 RVLFGTPEFIPP 150
V + PP
Sbjct: 78 MVSMVGVQLSPP 89
>2w9h_A DHFR, dihydrofolate reductase; oxidoreductase, one-carbon
metabolism; HET: TOP; 1.48A {Staphylococcus aureus} PDB:
2w9g_A* 3sqy_X* 3srq_X* 3srr_X* 3srs_X* 3sru_X* 3srw_X*
3frd_X* 3fre_X* 3frf_X* 3fyv_X* 3fyw_X* 3sr5_X* 3frb_X*
3fra_X* 3fy8_X* 3fy9_X* 3fq0_A* 3f0b_X* 3f0s_X* ...
Length = 159
Score = 25.5 bits (57), Expect = 7.6
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 19/81 (23%)
Query: 3 FESEGIPDPPSGAIGVSNNRTSVVITWSSPPYDG-GCMITGYVVE-MKAGTQPWVELSES 60
FES G P P NR +VV+T S ++ G + + + + ++
Sbjct: 48 FESIGKPLP---------NRRNVVLT-SDTSFNVEGVDVIHSIEDIYQLPGHVFI----- 92
Query: 61 IGGGELFERV--VADDFTLTE 79
GG LFE + DD +T
Sbjct: 93 FGGQTLFEEMIDKVDDMYITV 113
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase,
phosphorylation, transferase-antibiotic COMP; HET: ANP
B31; 2.10A {Enterococcus faecalis} PDB: 2b0q_A* 1l8t_A*
3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Length = 263
Score = 25.8 bits (56), Expect = 7.8
Identities = 8/33 (24%), Positives = 10/33 (30%), Gaps = 2/33 (6%)
Query: 97 HRNNIVHLDLKPENIMCVSRTSHHIKIIDFGLA 129
H DL NI + ID G +
Sbjct: 181 EELVFSHGDLGDSNIFV--KDGKVSGFIDLGRS 211
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin
domain, cytokine-cytokine REC complex; HET: NAG; 2.30A
{Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B*
2erj_B*
Length = 214
Score = 25.9 bits (56), Expect = 8.0
Identities = 7/51 (13%), Positives = 11/51 (21%), Gaps = 5/51 (9%)
Query: 9 PDPPSGAIGVSNNRTSVVITWSSPP---YDGGCMITGYVVEMKAGTQPWVE 56
P V I+W Y + + + W E
Sbjct: 106 LMAPISLQVVHVETHRCNISWEISQASHYFERHLE--FEARTLSPGHTWEE 154
>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor,
receptor, glycoprotein, polymorphism, secreted,
cytokine/cytokine receptor complex; 2.76A {Homo
sapiens}
Length = 211
Score = 25.9 bits (56), Expect = 8.1
Identities = 8/41 (19%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 23 TSVVITWSSPPYDGGCMITGYVVEMKA-GTQPWVELSESIG 62
++ W P + Y V+ K G + W + G
Sbjct: 21 FHNILQWQ-PGRALTGNSSVYFVQYKIYGQRQWKNKEDCWG 60
>2w3w_A Dihydrofolate reductase; nonclassical antifolates, one-carbon
metabolism, lipophilic antifolates, NADP,
oxidoreductase; HET: VG9 NDP; 1.60A {Mycobacterium
avium} PDB: 2w3v_A*
Length = 167
Score = 25.6 bits (57), Expect = 8.5
Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 13/66 (19%)
Query: 21 NRTSVVITWSSPPYDG-GCMITGYVVE----MKAGTQPWVELSESIGGGELFERV--VAD 73
R +VV++ P + G + G + + PWV IGG +++ A
Sbjct: 63 GRRNVVVS-RRPDFVAEGARVAGSLEAALAYAGSDPAPWV-----IGGAQIYLLALPHAT 116
Query: 74 DFTLTE 79
+TE
Sbjct: 117 RCEVTE 122
>1w36_D RECD, exodeoxyribonuclease V alpha chain; recombination, helicase,
hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli}
SCOP: c.37.1.19 c.37.1.19 PDB: 3k70_D*
Length = 608
Score = 25.8 bits (57), Expect = 9.6
Identities = 5/22 (22%), Positives = 9/22 (40%)
Query: 121 IKIIDFGLAQKINPDHPPRVLF 142
++ +D A + D P V
Sbjct: 16 LRPLDVQFALTVAGDEHPAVTL 37
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.141 0.447
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,071,824
Number of extensions: 183609
Number of successful extensions: 1360
Number of sequences better than 10.0: 1
Number of HSP's gapped: 805
Number of HSP's successfully gapped: 425
Length of query: 179
Length of database: 6,701,793
Length adjustment: 87
Effective length of query: 92
Effective length of database: 4,272,666
Effective search space: 393085272
Effective search space used: 393085272
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (24.7 bits)