Query psy1098
Match_columns 390
No_of_seqs 199 out of 2489
Neff 10.1
Searched_HMMs 29240
Date Fri Aug 16 23:21:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1098.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1098hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 6.3E-45 2.2E-49 331.9 34.4 284 23-360 10-299 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 1.8E-44 6.2E-49 327.9 32.6 271 2-328 30-302 (302)
3 3ii7_A Kelch-like protein 7; p 100.0 1.8E-44 6.3E-49 328.5 31.3 271 2-326 24-295 (306)
4 1zgk_A Kelch-like ECH-associat 100.0 7.6E-44 2.6E-48 324.8 32.3 264 2-324 39-308 (308)
5 2xn4_A Kelch-like protein 2; s 100.0 7.5E-43 2.6E-47 317.3 32.7 268 32-354 10-282 (302)
6 4asc_A Kelch repeat and BTB do 100.0 3.7E-44 1.3E-48 327.9 24.1 283 3-334 14-306 (315)
7 2vpj_A Kelch-like protein 12; 100.0 3.1E-43 1.1E-47 319.6 29.8 265 2-325 31-300 (301)
8 3ii7_A Kelch-like protein 7; p 100.0 1.4E-42 4.7E-47 316.2 31.6 266 37-359 11-283 (306)
9 2uvk_A YJHT; unknown function, 100.0 1.3E-42 4.4E-47 323.2 29.8 302 23-360 5-345 (357)
10 2woz_A Kelch repeat and BTB do 100.0 5.5E-43 1.9E-47 320.5 25.0 280 4-332 26-314 (318)
11 2vpj_A Kelch-like protein 12; 100.0 4.5E-42 1.5E-46 312.0 29.8 260 35-356 12-277 (301)
12 4asc_A Kelch repeat and BTB do 100.0 2.4E-40 8E-45 302.6 30.1 244 37-336 4-254 (315)
13 2woz_A Kelch repeat and BTB do 100.0 4.2E-40 1.4E-44 301.3 28.4 272 26-357 7-287 (318)
14 2zwa_A Leucine carboxyl methyl 100.0 2.1E-38 7.2E-43 317.9 30.7 293 23-357 384-694 (695)
15 2uvk_A YJHT; unknown function, 100.0 1.6E-37 5.3E-42 288.9 23.4 257 3-305 32-350 (357)
16 1k3i_A Galactose oxidase precu 100.0 2.2E-33 7.4E-38 281.2 24.4 283 3-335 167-531 (656)
17 2zwa_A Leucine carboxyl methyl 100.0 6.4E-32 2.2E-36 270.9 25.5 222 72-337 384-619 (695)
18 1k3i_A Galactose oxidase precu 100.0 1.7E-27 5.9E-32 238.4 21.2 237 3-268 220-530 (656)
19 4go6_A HCF N-terminal chain 1; 98.2 8.8E-07 3E-11 51.7 3.5 36 354-389 3-38 (45)
20 3q7m_A Lipoprotein YFGL, BAMB; 97.8 0.017 5.8E-07 52.7 28.4 243 4-332 65-325 (376)
21 3mbr_X Glutamine cyclotransfer 97.8 0.011 3.7E-07 50.4 22.2 160 31-239 24-184 (243)
22 3nol_A Glutamine cyclotransfer 97.7 0.018 6.2E-07 49.5 21.8 207 9-268 26-245 (262)
23 3dsm_A Uncharacterized protein 97.7 0.029 9.9E-07 50.2 26.9 253 4-332 19-285 (328)
24 3mbr_X Glutamine cyclotransfer 97.7 0.0077 2.6E-07 51.3 19.1 160 78-300 22-182 (243)
25 1p22_A F-BOX/WD-repeat protein 97.4 0.025 8.4E-07 52.8 20.6 220 33-337 138-357 (435)
26 3dsm_A Uncharacterized protein 97.3 0.082 2.8E-06 47.2 24.2 195 51-302 16-217 (328)
27 3nol_A Glutamine cyclotransfer 97.3 0.011 3.9E-07 50.8 15.2 159 80-301 46-205 (262)
28 3v9f_A Two-component system se 97.2 0.027 9.2E-07 57.0 20.4 259 4-337 385-649 (781)
29 3q7m_A Lipoprotein YFGL, BAMB; 97.2 0.12 4.1E-06 46.9 30.0 217 32-333 48-285 (376)
30 1l0q_A Surface layer protein; 97.1 0.049 1.7E-06 49.6 19.2 185 39-302 3-194 (391)
31 3nok_A Glutaminyl cyclase; bet 97.0 0.13 4.5E-06 44.2 20.0 157 31-239 58-215 (268)
32 2iwa_A Glutamine cyclotransfer 97.0 0.14 4.6E-06 44.4 21.9 206 10-268 5-226 (266)
33 3bws_A Protein LP49; two-domai 97.0 0.036 1.2E-06 51.3 17.8 195 37-300 133-337 (433)
34 2ovr_B FBW7, F-BOX/WD repeat p 96.9 0.14 4.7E-06 47.7 21.1 95 210-337 288-383 (445)
35 4a2l_A BT_4663, two-component 96.9 0.12 4.1E-06 52.3 21.4 259 4-337 379-652 (795)
36 1l0q_A Surface layer protein; 96.8 0.02 6.8E-07 52.3 14.1 147 38-239 44-194 (391)
37 3vgz_A Uncharacterized protein 96.8 0.26 9E-06 43.7 23.8 198 38-302 101-308 (353)
38 2iwa_A Glutamine cyclotransfer 96.7 0.16 5.3E-06 44.0 18.0 159 80-300 24-184 (266)
39 2ovr_B FBW7, F-BOX/WD repeat p 96.7 0.11 3.7E-06 48.4 18.4 216 34-337 125-340 (445)
40 4ery_A WD repeat-containing pr 96.6 0.31 1.1E-05 42.6 20.8 67 210-299 203-270 (312)
41 1p22_A F-BOX/WD-repeat protein 96.4 0.097 3.3E-06 48.6 15.9 187 34-298 179-366 (435)
42 3nok_A Glutaminyl cyclase; bet 96.3 0.057 1.9E-06 46.5 12.2 156 79-300 57-213 (268)
43 3jrp_A Fusion protein of prote 96.2 0.62 2.1E-05 41.5 19.7 71 37-120 22-96 (379)
44 3v9f_A Two-component system se 96.2 0.33 1.1E-05 49.0 19.3 211 4-268 429-646 (781)
45 4aez_A CDC20, WD repeat-contai 96.1 0.22 7.6E-06 45.5 16.5 96 210-337 271-372 (401)
46 4ery_A WD repeat-containing pr 96.1 0.63 2.1E-05 40.6 21.0 222 37-337 34-260 (312)
47 4aez_A CDC20, WD repeat-contai 96.1 0.82 2.8E-05 41.7 21.4 180 52-300 113-296 (401)
48 1gxr_A ESG1, transducin-like e 96.0 0.57 2E-05 41.0 18.1 216 38-337 109-329 (337)
49 3ow8_A WD repeat-containing pr 95.9 0.82 2.8E-05 40.4 18.7 94 210-337 217-313 (321)
50 3hfq_A Uncharacterized protein 95.9 0.62 2.1E-05 41.4 17.9 30 37-68 50-79 (347)
51 1sq9_A Antiviral protein SKI8; 95.9 0.92 3.1E-05 40.9 19.2 70 210-299 197-269 (397)
52 4a2l_A BT_4663, two-component 95.8 0.32 1.1E-05 49.2 17.4 213 4-268 429-649 (795)
53 1gxr_A ESG1, transducin-like e 95.8 0.37 1.3E-05 42.3 16.0 220 37-337 62-288 (337)
54 3vgz_A Uncharacterized protein 95.8 0.96 3.3E-05 39.9 28.0 208 38-302 53-267 (353)
55 1k8k_C P40, ARP2/3 complex 41 95.7 1 3.5E-05 40.0 21.9 71 37-119 19-90 (372)
56 1rwi_B Serine/threonine-protei 95.6 0.88 3E-05 38.5 18.4 215 37-335 34-254 (270)
57 3vl1_A 26S proteasome regulato 95.5 1.4 4.7E-05 40.1 22.8 96 210-337 258-357 (420)
58 3dwl_C Actin-related protein 2 95.5 0.2 6.9E-06 45.1 13.2 152 37-235 22-178 (377)
59 3bws_A Protein LP49; two-domai 95.5 1.5 5E-05 40.2 23.4 191 53-301 102-296 (433)
60 4a11_B DNA excision repair pro 95.5 1.4 4.7E-05 39.7 18.9 64 38-114 112-177 (408)
61 2xbg_A YCF48-like protein; pho 95.5 1.3 4.4E-05 39.3 24.1 217 12-305 66-287 (327)
62 4gga_A P55CDC, cell division c 95.5 0.98 3.4E-05 41.5 17.9 83 225-337 301-387 (420)
63 2hqs_A Protein TOLB; TOLB, PAL 95.4 1 3.5E-05 41.5 17.8 202 38-305 190-395 (415)
64 3no2_A Uncharacterized protein 95.4 1.2 4.1E-05 38.5 21.5 213 38-332 5-230 (276)
65 1r5m_A SIR4-interacting protei 95.4 1.2 4.2E-05 40.2 18.3 25 210-239 300-324 (425)
66 4gqb_B Methylosome protein 50; 95.4 1 3.4E-05 40.4 17.1 23 210-236 226-248 (344)
67 1r5m_A SIR4-interacting protei 95.3 1.5 5.2E-05 39.6 18.5 93 210-337 258-353 (425)
68 1pjx_A Dfpase, DIISOPROPYLFLUO 95.3 1.3 4.6E-05 38.3 20.7 74 37-118 28-106 (314)
69 3mkq_A Coatomer beta'-subunit; 95.1 0.51 1.7E-05 47.5 15.9 191 37-299 24-219 (814)
70 3u4y_A Uncharacterized protein 95.1 1.5 5.1E-05 38.4 17.4 71 38-118 52-123 (331)
71 3v7d_B Cell division control p 95.1 2.1 7.1E-05 39.6 21.5 94 210-337 279-373 (464)
72 1got_B GT-beta; complex (GTP-b 95.1 1.7 5.8E-05 38.5 18.5 65 210-299 237-303 (340)
73 4g56_B MGC81050 protein; prote 95.1 1.2 4.1E-05 39.9 16.9 93 210-337 238-335 (357)
74 3jrp_A Fusion protein of prote 95.1 0.96 3.3E-05 40.3 16.3 21 211-235 115-135 (379)
75 3ow8_A WD repeat-containing pr 95.1 1.7 5.7E-05 38.3 19.4 94 210-337 175-271 (321)
76 1kb0_A Quinohemoprotein alcoho 95.0 3.1 0.00011 41.1 27.4 126 31-185 71-206 (677)
77 2ynn_A Coatomer subunit beta'; 94.9 1.3 4.6E-05 38.5 16.3 65 37-114 24-88 (304)
78 3jro_A Fusion protein of prote 94.7 1.5 5E-05 44.1 17.9 96 37-152 20-123 (753)
79 1got_B GT-beta; complex (GTP-b 94.7 2.1 7.3E-05 37.8 20.5 96 210-337 195-293 (340)
80 3scy_A Hypothetical bacterial 94.7 2.2 7.5E-05 38.0 17.8 76 40-119 15-93 (361)
81 3zwl_B Eukaryotic translation 94.7 2.1 7.3E-05 37.7 20.0 66 210-301 186-253 (369)
82 3g4e_A Regucalcin; six bladed 94.6 2.1 7.1E-05 37.2 17.7 66 37-120 24-90 (297)
83 2ad6_A Methanol dehydrogenase 94.5 3.7 0.00013 39.7 23.1 127 31-185 56-192 (571)
84 1q7f_A NHL, brain tumor CG1071 94.4 2.1 7.3E-05 36.5 22.3 222 37-332 40-268 (286)
85 1jmx_B Amine dehydrogenase; ox 94.4 2.5 8.4E-05 37.1 17.4 67 37-116 10-78 (349)
86 2ojh_A Uncharacterized protein 94.3 2.1 7.2E-05 36.2 18.6 148 49-239 19-167 (297)
87 1k8k_C P40, ARP2/3 complex 41 94.3 1.2 4E-05 39.7 14.7 28 86-119 19-46 (372)
88 1nir_A Nitrite reductase; hemo 94.2 4 0.00014 39.1 19.1 75 210-305 334-415 (543)
89 4e54_B DNA damage-binding prot 94.1 1.7 5.6E-05 40.2 15.7 98 37-152 131-231 (435)
90 2ojh_A Uncharacterized protein 94.1 2.2 7.6E-05 36.1 15.7 73 37-119 52-126 (297)
91 3u4y_A Uncharacterized protein 94.1 2.8 9.4E-05 36.6 19.0 64 37-115 9-74 (331)
92 1erj_A Transcriptional repress 93.9 3.6 0.00012 37.3 20.6 66 37-116 134-200 (393)
93 3k26_A Polycomb protein EED; W 93.9 3.2 0.00011 36.5 18.5 23 210-236 172-194 (366)
94 3hfq_A Uncharacterized protein 93.8 3.3 0.00011 36.5 21.5 62 52-119 18-79 (347)
95 2pm9_A Protein WEB1, protein t 93.8 2.3 7.9E-05 38.4 15.9 23 210-236 274-296 (416)
96 3fm0_A Protein CIAO1; WDR39,SG 93.8 0.48 1.6E-05 42.3 10.9 72 210-305 116-189 (345)
97 1rwi_B Serine/threonine-protei 93.6 2.9 0.0001 35.2 17.6 173 37-268 77-253 (270)
98 3dwl_C Actin-related protein 2 93.6 0.6 2.1E-05 41.9 11.3 154 86-299 22-179 (377)
99 1pjx_A Dfpase, DIISOPROPYLFLUO 93.4 2 6.7E-05 37.2 14.2 74 38-118 83-167 (314)
100 3jro_A Fusion protein of prote 93.3 2.3 7.8E-05 42.6 16.1 64 38-113 67-133 (753)
101 3scy_A Hypothetical bacterial 93.2 4.2 0.00014 36.0 21.9 28 210-241 222-249 (361)
102 3odt_A Protein DOA1; ubiquitin 93.2 3.6 0.00012 35.2 17.0 65 210-302 195-260 (313)
103 2aq5_A Coronin-1A; WD40 repeat 93.2 1 3.5E-05 41.0 12.3 106 88-235 145-255 (402)
104 2hqs_A Protein TOLB; TOLB, PAL 92.9 5.5 0.00019 36.4 23.3 211 52-335 159-374 (415)
105 2ecf_A Dipeptidyl peptidase IV 92.7 3.8 0.00013 40.6 16.7 32 37-68 47-80 (741)
106 2ad6_A Methanol dehydrogenase 92.5 8 0.00027 37.3 23.8 75 225-331 444-523 (571)
107 3mkq_A Coatomer beta'-subunit; 92.4 7.8 0.00027 38.7 18.7 24 210-237 197-220 (814)
108 1vyh_C Platelet-activating fac 92.3 6.5 0.00022 35.8 17.5 22 211-236 308-329 (410)
109 2pm9_A Protein WEB1, protein t 92.3 6.2 0.00021 35.5 18.0 25 211-239 178-202 (416)
110 1flg_A Protein (quinoprotein e 92.0 9.3 0.00032 36.9 24.3 76 31-118 62-144 (582)
111 3zwl_B Eukaryotic translation 92.0 6 0.0002 34.7 18.3 26 210-239 229-254 (369)
112 1vyh_C Platelet-activating fac 92.0 7.1 0.00024 35.5 21.5 146 38-237 120-268 (410)
113 3fm0_A Protein CIAO1; WDR39,SG 92.0 6.2 0.00021 34.8 21.5 184 37-268 27-214 (345)
114 3hxj_A Pyrrolo-quinoline quino 91.9 4.5 0.00015 35.2 14.6 103 84-239 105-210 (330)
115 3azo_A Aminopeptidase; POP fam 91.9 9.9 0.00034 37.0 19.8 76 210-304 252-332 (662)
116 2ecf_A Dipeptidyl peptidase IV 91.8 10 0.00036 37.4 18.6 68 37-120 119-189 (741)
117 2xbg_A YCF48-like protein; pho 91.8 6.5 0.00022 34.7 23.6 240 11-334 24-269 (327)
118 3ei3_B DNA damage-binding prot 91.8 6.2 0.00021 35.2 15.6 144 39-234 87-236 (383)
119 3pe7_A Oligogalacturonate lyas 91.6 7.1 0.00024 34.8 19.6 19 287-305 319-337 (388)
120 4aow_A Guanine nucleotide-bind 91.6 6.4 0.00022 34.1 19.3 24 210-237 226-249 (340)
121 3mmy_A MRNA export factor; mRN 91.5 6.7 0.00023 34.3 18.3 52 52-114 108-162 (368)
122 3ott_A Two-component system se 91.5 7.4 0.00025 38.8 17.2 109 86-239 482-591 (758)
123 3e5z_A Putative gluconolactona 91.4 6.3 0.00021 33.8 14.8 77 37-118 79-167 (296)
124 2ynn_A Coatomer subunit beta'; 91.4 6.3 0.00022 34.0 14.8 65 210-300 197-262 (304)
125 2dg1_A DRP35, lactonase; beta 91.4 6.8 0.00023 34.1 17.6 71 37-117 55-126 (333)
126 1sq9_A Antiviral protein SKI8; 91.3 6 0.0002 35.3 15.1 26 210-236 244-269 (397)
127 1w6s_A Methanol dehydrogenase 91.2 11 0.00039 36.5 21.0 127 31-185 56-198 (599)
128 4g56_B MGC81050 protein; prote 91.1 4.7 0.00016 35.9 14.0 26 210-239 150-175 (357)
129 2pbi_B Guanine nucleotide-bind 91.0 8 0.00027 34.3 17.9 96 210-337 209-307 (354)
130 3v7d_B Cell division control p 90.9 9.5 0.00033 35.0 21.9 147 37-239 279-426 (464)
131 1qhu_A Protein (hemopexin); be 90.9 10 0.00035 35.3 20.7 58 37-113 158-216 (460)
132 3fvz_A Peptidyl-glycine alpha- 90.8 7.9 0.00027 33.9 29.6 231 52-335 69-312 (329)
133 1pgu_A Actin interacting prote 90.7 7.9 0.00027 36.9 16.1 55 210-268 263-317 (615)
134 3azo_A Aminopeptidase; POP fam 90.4 14 0.00047 35.9 18.0 72 210-304 304-376 (662)
135 3sfz_A APAF-1, apoptotic pepti 90.2 19 0.00064 38.1 19.7 95 210-337 1014-1108(1249)
136 2xyi_A Probable histone-bindin 90.1 7.6 0.00026 35.5 14.7 22 210-235 243-264 (430)
137 1nir_A Nitrite reductase; hemo 90.0 7.3 0.00025 37.2 14.9 62 37-114 148-213 (543)
138 4aow_A Guanine nucleotide-bind 90.0 8.9 0.0003 33.2 15.8 64 210-299 184-248 (340)
139 1ri6_A Putative isomerase YBHE 90.0 8.9 0.0003 33.2 23.0 18 288-305 253-272 (343)
140 3sfz_A APAF-1, apoptotic pepti 89.9 6.2 0.00021 41.8 15.6 68 37-117 972-1039(1249)
141 1pgu_A Actin interacting prote 89.9 14 0.00047 35.2 21.2 64 213-300 175-241 (615)
142 2z2n_A Virginiamycin B lyase; 89.8 8.4 0.00029 32.6 23.8 190 37-303 67-260 (299)
143 3e5z_A Putative gluconolactona 89.8 8.8 0.0003 32.8 19.8 66 38-119 40-106 (296)
144 2bkl_A Prolyl endopeptidase; m 89.8 16 0.00055 35.9 19.1 232 36-305 78-315 (695)
145 4gqb_B Methylosome protein 50; 89.8 7.6 0.00026 34.5 14.0 25 211-239 270-294 (344)
146 2qc5_A Streptogramin B lactona 89.6 8.7 0.0003 32.5 23.8 190 37-303 72-265 (300)
147 3ju4_A Endo-N-acetylneuraminid 89.6 12 0.0004 34.0 14.2 205 111-337 268-484 (670)
148 3ott_A Two-component system se 89.3 19 0.00064 35.9 22.6 214 53-337 393-619 (758)
149 3i2n_A WD repeat-containing pr 89.1 5.5 0.00019 34.8 12.6 68 210-300 128-202 (357)
150 4gga_A P55CDC, cell division c 88.7 14 0.00047 33.6 20.8 83 52-152 125-209 (420)
151 2xdw_A Prolyl endopeptidase; a 88.5 20 0.00069 35.3 19.1 105 102-236 258-370 (710)
152 4a11_B DNA excision repair pro 88.4 13 0.00044 33.0 17.3 24 37-64 55-78 (408)
153 3iuj_A Prolyl endopeptidase; h 88.1 21 0.00073 35.1 18.2 105 103-240 259-365 (693)
154 3bg1_A Protein SEC13 homolog; 87.9 7.1 0.00024 33.9 12.3 69 37-118 24-96 (316)
155 1ri6_A Putative isomerase YBHE 87.2 14 0.00047 31.9 21.8 17 289-305 302-318 (343)
156 2bkl_A Prolyl endopeptidase; m 87.2 23 0.00078 34.8 16.8 153 51-239 201-356 (695)
157 3g4e_A Regucalcin; six bladed 87.1 10 0.00035 32.6 12.7 60 52-112 73-139 (297)
158 2z3z_A Dipeptidyl aminopeptida 87.1 24 0.00081 34.5 23.3 74 210-304 322-398 (706)
159 3i2n_A WD repeat-containing pr 86.8 15 0.00051 31.9 21.0 62 210-298 179-244 (357)
160 4e54_B DNA damage-binding prot 86.5 6.1 0.00021 36.2 11.5 66 210-299 176-242 (435)
161 4ggc_A P55CDC, cell division c 86.3 15 0.0005 31.3 17.4 42 288-337 264-307 (318)
162 1qks_A Cytochrome CD1 nitrite 86.1 25 0.00085 33.8 18.9 107 169-305 321-434 (567)
163 1itv_A MMP9; adaptive molecula 85.9 12 0.00043 30.2 13.2 63 210-300 109-177 (195)
164 2hes_X YDR267CP; beta-propelle 85.9 17 0.00058 31.7 18.2 28 210-241 164-191 (330)
165 3dm0_A Maltose-binding peripla 85.9 28 0.00095 34.1 17.3 62 212-299 532-594 (694)
166 2z2n_A Virginiamycin B lyase; 85.6 15 0.00052 30.9 24.1 191 37-303 25-218 (299)
167 2z3z_A Dipeptidyl aminopeptida 85.6 28 0.00096 34.0 20.4 79 210-304 268-351 (706)
168 3no2_A Uncharacterized protein 85.4 16 0.00056 31.1 16.0 195 86-356 4-205 (276)
169 3pe7_A Oligogalacturonate lyas 84.8 10 0.00035 33.7 12.0 64 52-119 168-232 (388)
170 3vl1_A 26S proteasome regulato 84.8 21 0.00073 31.9 22.1 108 85-238 107-216 (420)
171 1pex_A Collagenase-3, MMP-13; 84.7 15 0.00051 30.1 14.5 96 210-334 79-183 (207)
172 2pbi_B Guanine nucleotide-bind 84.6 21 0.00071 31.5 16.6 95 210-337 251-349 (354)
173 1yfq_A Cell cycle arrest prote 84.3 19 0.00066 31.0 17.3 67 37-118 22-95 (342)
174 3b7f_A Glycosyl hydrolase, BNR 84.3 23 0.00079 31.9 21.7 97 12-120 43-155 (394)
175 2xyi_A Probable histone-bindin 84.1 7.7 0.00026 35.5 11.0 21 210-234 289-309 (430)
176 3hxj_A Pyrrolo-quinoline quino 84.0 20 0.00068 30.9 20.6 64 36-117 106-172 (330)
177 1itv_A MMP9; adaptive molecula 83.9 16 0.00054 29.6 12.1 96 210-334 64-165 (195)
178 3c5m_A Oligogalacturonate lyas 83.5 16 0.00053 32.4 12.6 63 52-119 168-232 (396)
179 3ei3_B DNA damage-binding prot 83.0 24 0.00084 31.1 16.4 145 88-297 87-236 (383)
180 2ymu_A WD-40 repeat protein; u 82.9 32 0.0011 32.4 16.1 22 210-235 478-499 (577)
181 4ggc_A P55CDC, cell division c 82.6 21 0.00073 30.2 17.7 56 52-116 45-102 (318)
182 3dm0_A Maltose-binding peripla 82.3 39 0.0013 33.0 19.5 24 210-237 572-595 (694)
183 2aq5_A Coronin-1A; WD40 repeat 81.9 18 0.00061 32.4 12.4 65 212-300 145-210 (402)
184 1qhu_A Protein (hemopexin); be 81.7 34 0.0012 31.9 18.4 91 37-150 107-206 (460)
185 2dg1_A DRP35, lactonase; beta 81.6 25 0.00086 30.3 16.5 80 37-118 97-177 (333)
186 3c5m_A Oligogalacturonate lyas 81.6 27 0.00094 30.8 18.9 72 226-305 265-337 (396)
187 2qc5_A Streptogramin B lactona 81.6 23 0.00078 29.8 24.1 190 37-303 30-223 (300)
188 1q7f_A NHL, brain tumor CG1071 81.5 23 0.00078 29.8 22.8 178 37-266 88-268 (286)
189 1kv9_A Type II quinohemoprotei 81.4 42 0.0014 32.9 28.7 123 31-185 60-194 (668)
190 1pby_B Quinohemoprotein amine 81.0 25 0.00087 30.0 15.2 75 38-117 46-129 (337)
191 2pm7_B Protein transport prote 81.0 25 0.00086 29.9 14.9 72 211-305 219-294 (297)
192 2hes_X YDR267CP; beta-propelle 80.9 27 0.00093 30.3 17.4 44 288-337 271-320 (330)
193 3frx_A Guanine nucleotide-bind 80.4 28 0.00095 30.1 20.3 23 210-236 207-229 (319)
194 1yfq_A Cell cycle arrest prote 80.2 28 0.00095 29.9 19.6 43 288-337 273-315 (342)
195 2xdw_A Prolyl endopeptidase; a 80.1 48 0.0016 32.6 23.8 233 36-305 82-331 (710)
196 3k26_A Polycomb protein EED; W 80.0 15 0.00053 31.9 11.1 64 211-300 85-150 (366)
197 3odt_A Protein DOA1; ubiquitin 79.7 27 0.00092 29.5 17.9 25 85-115 27-51 (313)
198 3b7f_A Glycosyl hydrolase, BNR 78.6 37 0.0013 30.5 20.2 61 54-120 33-98 (394)
199 1yr2_A Prolyl oligopeptidase; 78.6 54 0.0019 32.4 21.3 232 36-305 117-360 (741)
200 3c7x_A Matrix metalloproteinas 77.4 27 0.00091 28.2 11.6 62 210-299 109-177 (196)
201 1pex_A Collagenase-3, MMP-13; 77.1 28 0.00097 28.4 18.4 65 210-302 127-197 (207)
202 1qks_A Cytochrome CD1 nitrite 76.3 56 0.0019 31.3 18.1 59 37-111 166-226 (567)
203 1kv9_A Type II quinohemoprotei 76.3 61 0.0021 31.7 27.1 62 4-67 129-195 (668)
204 3mmy_A MRNA export factor; mRN 75.6 39 0.0013 29.2 16.9 68 38-118 54-123 (368)
205 2vdu_B TRNA (guanine-N(7)-)-me 75.3 49 0.0017 30.1 19.3 65 211-300 210-274 (450)
206 1erj_A Transcriptional repress 75.1 45 0.0016 29.7 19.7 24 210-237 218-241 (393)
207 2ghs_A AGR_C_1268P; regucalcin 74.7 42 0.0014 29.1 21.1 66 38-120 61-126 (326)
208 1kb0_A Quinohemoprotein alcoho 74.4 68 0.0023 31.4 28.0 64 4-68 140-208 (677)
209 1gen_A Gelatinase A; hydrolase 74.0 36 0.0012 28.0 15.3 52 210-267 135-192 (218)
210 3iz6_a 40S ribosomal protein R 73.7 48 0.0016 29.4 20.6 53 210-268 309-364 (380)
211 1pby_B Quinohemoprotein amine 73.4 42 0.0014 28.6 13.4 52 51-116 114-167 (337)
212 2vdu_B TRNA (guanine-N(7)-)-me 73.3 54 0.0019 29.8 18.6 24 210-237 251-274 (450)
213 1yiq_A Quinohemoprotein alcoho 72.7 76 0.0026 31.2 16.8 127 136-303 65-200 (689)
214 2ymu_A WD-40 repeat protein; u 72.6 64 0.0022 30.3 17.5 50 210-268 437-487 (577)
215 1jmx_B Amine dehydrogenase; ox 72.4 27 0.00093 30.1 10.4 67 210-301 10-78 (349)
216 3f3f_A Nucleoporin SEH1; struc 71.9 45 0.0015 28.3 15.7 22 211-236 124-145 (351)
217 1nr0_A Actin interacting prote 71.9 72 0.0025 30.5 19.4 26 210-239 250-275 (611)
218 3c7x_A Matrix metalloproteinas 71.7 38 0.0013 27.3 11.1 64 210-299 61-129 (196)
219 3iz6_a 40S ribosomal protein R 71.6 54 0.0018 29.0 16.1 21 210-234 355-375 (380)
220 1w6s_A Methanol dehydrogenase 70.3 58 0.002 31.4 12.8 127 135-303 56-199 (599)
221 1xfd_A DIP, dipeptidyl aminope 70.3 83 0.0028 30.6 18.1 31 210-240 265-295 (723)
222 1su3_A Interstitial collagenas 69.1 73 0.0025 29.5 14.7 65 210-302 367-437 (450)
223 1yiq_A Quinohemoprotein alcoho 69.0 91 0.0031 30.6 29.0 126 31-185 64-199 (689)
224 3bg1_A Protein SEC13 homolog; 68.2 57 0.0019 27.9 15.6 25 211-239 117-142 (316)
225 1yr2_A Prolyl oligopeptidase; 68.0 97 0.0033 30.5 16.4 163 39-241 281-448 (741)
226 1gen_A Gelatinase A; hydrolase 66.8 52 0.0018 27.0 15.4 96 210-334 87-193 (218)
227 1n7d_A LDL receptor, low-densi 65.8 1.1E+02 0.0036 30.2 14.3 94 210-333 507-602 (699)
228 3o4h_A Acylamino-acid-releasin 65.3 69 0.0024 30.3 12.3 59 54-120 134-192 (582)
229 2pm7_B Protein transport prote 64.4 65 0.0022 27.2 13.3 98 210-337 20-124 (297)
230 3f3f_A Nucleoporin SEH1; struc 64.3 65 0.0022 27.2 21.0 13 325-337 317-329 (351)
231 3lrv_A PRE-mRNA-splicing facto 64.2 71 0.0024 27.6 16.3 23 210-236 181-203 (343)
232 3a0f_A Xyloglucanase; beta-pro 63.5 1.2E+02 0.0042 30.1 25.8 19 287-305 274-292 (763)
233 2xzm_R RACK1; ribosome, transl 63.1 75 0.0026 27.5 18.4 20 210-233 224-243 (343)
234 3iuj_A Prolyl endopeptidase; h 63.1 1.2E+02 0.004 29.7 15.1 149 51-241 258-412 (693)
235 1hxn_A Hemopexin, HPX; heme, b 62.7 63 0.0022 26.5 12.0 61 36-112 27-90 (219)
236 4h5i_A Guanine nucleotide-exch 62.4 82 0.0028 27.7 17.2 24 210-237 280-303 (365)
237 3dr2_A Exported gluconolactona 62.1 73 0.0025 27.1 16.8 75 210-304 199-274 (305)
238 1ck7_A Protein (gelatinase A); 61.8 74 0.0025 30.9 11.5 53 210-268 548-606 (631)
239 2xzm_R RACK1; ribosome, transl 59.1 88 0.003 27.0 11.4 24 210-237 87-110 (343)
240 3gre_A Serine/threonine-protei 58.4 1E+02 0.0035 27.5 18.1 23 210-236 272-294 (437)
241 1flg_A Protein (quinoprotein e 57.5 1.4E+02 0.0046 28.7 12.8 70 210-303 68-144 (582)
242 3ba0_A Macrophage metalloelast 57.2 1.1E+02 0.0037 27.4 13.5 96 210-334 236-341 (365)
243 1sqj_A OXG-RCBH, oligoxylogluc 56.7 1.6E+02 0.0056 29.4 27.4 96 11-120 3-109 (789)
244 3o4h_A Acylamino-acid-releasin 55.8 1.3E+02 0.0046 28.2 12.5 71 210-301 160-231 (582)
245 1ck7_A Protein (gelatinase A); 55.4 1.5E+02 0.0053 28.7 12.5 17 210-232 500-516 (631)
246 3hrp_A Uncharacterized protein 55.1 1.2E+02 0.0041 27.3 14.8 153 86-298 141-299 (409)
247 2p9w_A MAL S 1 allergenic prot 50.6 1.3E+02 0.0045 26.5 13.6 149 141-336 147-306 (334)
248 2p4o_A Hypothetical protein; p 50.3 1.2E+02 0.004 25.8 26.4 83 24-120 28-112 (306)
249 1n7d_A LDL receptor, low-densi 49.9 2E+02 0.0067 28.3 19.3 65 210-299 551-616 (699)
250 1su3_A Interstitial collagenas 49.4 1.6E+02 0.0055 27.1 14.8 94 210-334 318-423 (450)
251 3frx_A Guanine nucleotide-bind 49.0 1.2E+02 0.0043 25.7 15.6 63 211-299 166-229 (319)
252 3hrp_A Uncharacterized protein 48.2 1.5E+02 0.0053 26.6 23.3 154 37-235 141-299 (409)
253 1z68_A Fibroblast activation p 47.5 1.1E+02 0.0037 29.8 10.5 31 210-240 263-297 (719)
254 3ba0_A Macrophage metalloelast 47.4 1.5E+02 0.0053 26.4 17.1 67 210-302 284-355 (365)
255 1nr0_A Actin interacting prote 45.7 2E+02 0.007 27.3 18.4 67 210-302 293-360 (611)
256 3tc9_A Hypothetical hydrolase; 45.4 1.5E+02 0.005 27.1 10.4 26 210-239 237-262 (430)
257 3fvz_A Peptidyl-glycine alpha- 44.6 1.5E+02 0.0051 25.4 23.2 206 37-297 101-322 (329)
258 2fp8_A Strictosidine synthase; 44.4 1.5E+02 0.0051 25.3 16.1 61 52-119 40-117 (322)
259 2fp8_A Strictosidine synthase; 41.0 1.7E+02 0.0057 24.9 17.9 203 37-298 91-314 (322)
260 3lrv_A PRE-mRNA-splicing facto 41.0 1.7E+02 0.0059 25.0 20.8 107 86-236 138-246 (343)
261 1npe_A Nidogen, entactin; glyc 40.9 1.5E+02 0.0051 24.3 23.1 191 37-300 47-241 (267)
262 2p9w_A MAL S 1 allergenic prot 40.0 1.9E+02 0.0067 25.4 14.1 141 86-269 147-305 (334)
263 1xfd_A DIP, dipeptidyl aminope 37.9 2.8E+02 0.0097 26.7 13.9 67 53-119 38-107 (723)
264 3ju4_A Endo-N-acetylneuraminid 37.0 2.5E+02 0.0084 25.7 21.3 120 23-150 279-406 (670)
265 3m0c_C LDL receptor, low-densi 36.7 3.4E+02 0.011 27.2 21.4 136 85-267 481-620 (791)
266 2hz6_A Endoplasmic reticulum t 36.6 7.7 0.00026 34.9 0.2 53 170-239 21-75 (369)
267 4a5s_A Dipeptidyl peptidase 4 35.2 3.3E+02 0.011 26.6 14.3 67 52-119 36-108 (740)
268 2ghs_A AGR_C_1268P; regucalcin 33.3 1.8E+02 0.006 25.0 8.6 65 210-304 60-125 (326)
269 3gre_A Serine/threonine-protei 32.9 2.6E+02 0.0088 24.7 14.1 26 210-239 225-250 (437)
270 3m0c_C LDL receptor, low-densi 32.6 3.9E+02 0.013 26.7 23.0 206 53-334 405-621 (791)
271 3oyo_A Hemopexin fold protein 31.7 1.1E+02 0.0039 25.1 6.6 61 37-111 127-197 (225)
272 4h5i_A Guanine nucleotide-exch 31.1 2.6E+02 0.009 24.3 22.3 102 210-337 230-335 (365)
273 2gop_A Trilobed protease; beta 30.9 2.4E+02 0.0084 23.8 16.5 18 51-68 84-101 (347)
274 3lp9_A LS-24; SEED albumin, pl 30.8 59 0.002 26.9 4.7 16 210-231 72-87 (227)
275 2mad_H Methylamine dehydrogena 30.7 2.8E+02 0.0096 24.5 19.5 215 37-299 77-352 (373)
276 2p4o_A Hypothetical protein; p 28.8 2.6E+02 0.009 23.5 11.2 70 210-305 42-112 (306)
277 3mpc_A FN3-like protein; fibro 27.5 53 0.0018 23.1 3.4 34 357-390 4-38 (103)
278 3k6s_A Integrin alpha-X; cell 27.0 5.6E+02 0.019 26.7 16.8 165 133-324 335-509 (1095)
279 2hz6_A Endoplasmic reticulum t 26.4 52 0.0018 29.3 3.9 46 210-267 9-56 (369)
280 3dw8_B Serine/threonine-protei 23.3 3.8E+02 0.013 23.5 17.8 21 212-236 240-260 (447)
281 4d9s_A UVB-resistance protein 22.1 4.2E+02 0.014 23.6 18.1 17 317-333 338-355 (406)
282 2be1_A Serine/threonine-protei 20.1 1.4E+02 0.0049 26.2 5.4 104 170-302 22-137 (339)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=6.3e-45 Score=331.89 Aligned_cols=284 Identities=18% Similarity=0.228 Sum_probs=233.1
Q ss_pred CCCCCCceeeeEEeCCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEccee---CCc
Q psy1098 23 PQPRPRHGHRAVAIKDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMV---EYG 99 (390)
Q Consensus 23 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~---~~~ 99 (390)
..|.+|..|+++.++++||++||......+++++||+.+++|+.++ .+|.+|.+|+++..+++||++||.. ...
T Consensus 10 ~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~ 86 (308)
T 1zgk_A 10 SSGLVPRGSHAPKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLA---DLQVPRSGLAGCVVGGLLYAVGGRNNSPDGN 86 (308)
T ss_dssp -----------CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCEEEETTEE
T ss_pred cCCeeeCCccccCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECC---CCCcccccceEEEECCEEEEECCCcCCCCCC
Confidence 4567899999999999999999986567889999999999999997 7899999999999999999999985 344
Q ss_pred eeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCc
Q psy1098 100 KYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGH 179 (390)
Q Consensus 100 ~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 179 (390)
...+++++||+.+++|++++++ |.+|..|+++.++++||++||.... ...+++++||+.+
T Consensus 87 ~~~~~~~~~d~~~~~W~~~~~~-------p~~r~~~~~~~~~~~iyv~GG~~~~-----------~~~~~~~~yd~~~-- 146 (308)
T 1zgk_A 87 TDSSALDCYNPMTNQWSPCAPM-------SVPRNRIGVGVIDGHIYAVGGSHGC-----------IHHNSVERYEPER-- 146 (308)
T ss_dssp EECCCEEEEETTTTEEEECCCC-------SSCCBTCEEEEETTEEEEECCEETT-----------EECCCEEEEETTT--
T ss_pred eecceEEEECCCCCeEeECCCC-------CcCccccEEEEECCEEEEEcCCCCC-----------cccccEEEECCCC--
Confidence 5678999999999999999875 5899999999999999999998764 6788999999987
Q ss_pred eeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCc-cCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE
Q psy1098 180 TTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNR-LSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI 258 (390)
Q Consensus 180 ~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~-~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~ 258 (390)
++|+.+ +++|.+|..|+++.+ +++||++||.++.. ++++++||+.+++|+. ...+|.+|..|+++++
T Consensus 147 -~~W~~~---~~~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~---~~~~p~~r~~~~~~~~ 214 (308)
T 1zgk_A 147 -DEWHLV---APMLTRRIGVGVAVL-----NRLLYAVGGFDGTNRLNSAECYYPERNEWRM---ITAMNTIRSGAGVCVL 214 (308)
T ss_dssp -TEEEEC---CCCSSCCBSCEEEEE-----TTEEEEECCBCSSCBCCCEEEEETTTTEEEE---CCCCSSCCBSCEEEEE
T ss_pred -CeEeEC---CCCCccccceEEEEE-----CCEEEEEeCCCCCCcCceEEEEeCCCCeEee---CCCCCCccccceEEEE
Confidence 699984 468999999999998 99999999987654 7899999999999999 5578999999999999
Q ss_pred CCEEEEEcCcccCCCccccccccccceecCceEEeecCCCeeeecccccccCCCCCCCCCcceeeeCCEEEEEeccCCcc
Q psy1098 259 GDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVINSRMYIWSGRDDYK 338 (390)
Q Consensus 259 ~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~ 338 (390)
+++|||+||.+... ..+++++||+.+++|+++.. +|.+|.+|+++.++++|||+||.++..
T Consensus 215 ~~~iyv~GG~~~~~-------------~~~~v~~yd~~~~~W~~~~~------~p~~r~~~~~~~~~~~i~v~GG~~~~~ 275 (308)
T 1zgk_A 215 HNCIYAAGGYDGQD-------------QLNSVERYDVETETWTFVAP------MKHRRSALGITVHQGRIYVLGGYDGHT 275 (308)
T ss_dssp TTEEEEECCBCSSS-------------BCCCEEEEETTTTEEEECCC------CSSCCBSCEEEEETTEEEEECCBCSSC
T ss_pred CCEEEEEeCCCCCC-------------ccceEEEEeCCCCcEEECCC------CCCCccceEEEEECCEEEEEcCcCCCc
Confidence 99999999986432 26899999999999999987 999999999999999999999987532
Q ss_pred cc--ccceeeeCeeEEEEecCCCC
Q psy1098 339 KA--WNNQVCCKDLWYLEVEKPGP 360 (390)
Q Consensus 339 ~~--~~~~~~~~d~w~~~~~~~~~ 360 (390)
.. ...+.+.++.|....++|..
T Consensus 276 ~~~~v~~yd~~~~~W~~~~~~p~~ 299 (308)
T 1zgk_A 276 FLDSVECYDPDTDTWSEVTRMTSG 299 (308)
T ss_dssp BCCEEEEEETTTTEEEEEEECSSC
T ss_pred ccceEEEEcCCCCEEeecCCCCCC
Confidence 11 11122334555555444443
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.8e-44 Score=327.94 Aligned_cols=271 Identities=17% Similarity=0.280 Sum_probs=237.3
Q ss_pred CCCCCCCCCceeEEecCCCCCCCCCCCceeeeEEeCCEEEEEccCCC-CcccceEEEECCCCcEEeeeecCCCCCCCcee
Q psy1098 2 DKLSDDNCPVYRWRRIDDPAGPQPRPRHGHRAVAIKDLMLVFGGGNE-GIVEELHVFNTATNQWFIPTLKGDIPPGCAAY 80 (390)
Q Consensus 2 ~~~~~~~~~~~~W~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~ 80 (390)
.++.+||+.+++|+.++ .+|.+|.+|++++++++|||+||... ...+++++||+.+++|+.++ .+|.+|..|
T Consensus 30 ~~~~~~d~~~~~W~~~~----~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~ 102 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVA----ELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA---NMRDRRSTL 102 (302)
T ss_dssp CCEEEEETTTTEEEEEC----CCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC---CCSSCCBSC
T ss_pred CcEEEEcCcCCcEeEcc----cCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCC---CCCccccce
Confidence 46778999999999997 78999999999999999999999654 36789999999999999998 789999999
Q ss_pred eEEEeCCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCC
Q psy1098 81 GIVVDNTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKP 160 (390)
Q Consensus 81 ~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~ 160 (390)
++++++++||++||... ....+++++||+.+++|+.++++ |.+|..|+++.++++||++||......
T Consensus 103 ~~~~~~~~iyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~~~-------p~~r~~~~~~~~~~~iyv~GG~~~~~~----- 169 (302)
T 2xn4_A 103 GAAVLNGLLYAVGGFDG-STGLSSVEAYNIKSNEWFHVAPM-------NTRRSSVGVGVVGGLLYAVGGYDVASR----- 169 (302)
T ss_dssp EEEEETTEEEEEEEECS-SCEEEEEEEEETTTTEEEEECCC-------SSCCBSCEEEEETTEEEEECCEETTTT-----
T ss_pred EEEEECCEEEEEcCCCC-CccCceEEEEeCCCCeEeecCCC-------CCcccCceEEEECCEEEEEeCCCCCCC-----
Confidence 99999999999999864 34578999999999999999875 588999999999999999999876421
Q ss_pred CCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCc-cCcEEEEecCCCeEee
Q psy1098 161 TPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNR-LSDLFMLDINSMTWQK 239 (390)
Q Consensus 161 ~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~-~~~v~~~d~~~~~W~~ 239 (390)
...++++.||+.+ ++|+.+ +.+|.+|..|+++.. +++||++||.++.. .+++++||+.+++|+.
T Consensus 170 ----~~~~~~~~yd~~~---~~W~~~---~~~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 234 (302)
T 2xn4_A 170 ----QCLSTVECYNATT---NEWTYI---AEMSTRRSGAGVGVL-----NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ 234 (302)
T ss_dssp ----EECCCEEEEETTT---TEEEEE---CCCSSCCBSCEEEEE-----TTEEEEECCBSSSSBCCCEEEEETTTTEEEE
T ss_pred ----ccccEEEEEeCCC---CcEEEC---CCCccccccccEEEE-----CCEEEEECCCCCCcccceEEEEeCCCCCEee
Confidence 4578899999987 699995 468899999999998 99999999987654 7899999999999999
Q ss_pred cccCCCCCCCCceeeEEEECCEEEEEcCcccCCCccccccccccceecCceEEeecCCCeeeecccccccCCCCCCCCCc
Q psy1098 240 PQILGPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGH 319 (390)
Q Consensus 240 ~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~ 319 (390)
...+|.+|..|+++.++++|||+||.+... ..+++++||+++++|+.++.. +|.+|.+|
T Consensus 235 ---~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~-------------~~~~v~~yd~~~~~W~~~~~~-----~~~~r~~~ 293 (302)
T 2xn4_A 235 ---VADMNMCRRNAGVCAVNGLLYVVGGDDGSC-------------NLASVEYYNPTTDKWTVVSSC-----MSTGRSYA 293 (302)
T ss_dssp ---ECCCSSCCBSCEEEEETTEEEEECCBCSSS-------------BCCCEEEEETTTTEEEECSSC-----CSSCCBSC
T ss_pred ---CCCCCCccccCeEEEECCEEEEECCcCCCc-------------ccccEEEEcCCCCeEEECCcc-----cCcccccc
Confidence 457889999999999999999999975432 267899999999999999732 99999999
Q ss_pred ceeeeCCEE
Q psy1098 320 CASVINSRM 328 (390)
Q Consensus 320 ~~~~~~~~l 328 (390)
++++++++|
T Consensus 294 ~~~~~~~~i 302 (302)
T 2xn4_A 294 GVTVIDKRL 302 (302)
T ss_dssp EEEEEEC--
T ss_pred eEEEecccC
Confidence 999998875
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.8e-44 Score=328.53 Aligned_cols=271 Identities=14% Similarity=0.240 Sum_probs=239.9
Q ss_pred CCCCCCCCCceeEEecCCCCCCCCCCCceeeeEEeCCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceee
Q psy1098 2 DKLSDDNCPVYRWRRIDDPAGPQPRPRHGHRAVAIKDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYG 81 (390)
Q Consensus 2 ~~~~~~~~~~~~W~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~ 81 (390)
++++.||+.+++|+.++ .+|.+|.+|++++++++|||+||......+++++||+.+++|+.++ .+|.+|..|+
T Consensus 24 ~~~~~~d~~~~~W~~~~----~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~ 96 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIR----CPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKL---GPPTPRDSLA 96 (306)
T ss_dssp TSEEEEETTTTEEEECC----CCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEE---CCSSCCBSCE
T ss_pred ceEEEecCCCCCEecCC----CCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECC---CCCcccccee
Confidence 46788999999999997 7899999999999999999999987667789999999999999998 7899999999
Q ss_pred EEEeCCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCC
Q psy1098 82 IVVDNTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPT 161 (390)
Q Consensus 82 ~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~ 161 (390)
+++++++||++||........+++++||+.+++|++++++ |.+|..|+++.++++||++||........
T Consensus 97 ~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~-------p~~r~~~~~~~~~~~iyv~GG~~~~~~~~---- 165 (306)
T 3ii7_A 97 ACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSM-------LTQRCSHGMVEANGLIYVCGGSLGNNVSG---- 165 (306)
T ss_dssp EEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCC-------SSCCBSCEEEEETTEEEEECCEESCTTTC----
T ss_pred EEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCC-------cCCcceeEEEEECCEEEEECCCCCCCCcc----
Confidence 9999999999999975566789999999999999999775 58899999999999999999987652100
Q ss_pred CccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCC-ccCcEEEEecCCCeEeec
Q psy1098 162 PSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGN-RLSDLFMLDINSMTWQKP 240 (390)
Q Consensus 162 ~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~-~~~~v~~~d~~~~~W~~~ 240 (390)
...+++++||+.+ ++|+.+. ++|.+|..|+++.+ +++|||+||.++. .++++++||+.+++|+.
T Consensus 166 ---~~~~~~~~yd~~~---~~W~~~~---~~p~~r~~~~~~~~-----~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~- 230 (306)
T 3ii7_A 166 ---RVLNSCEVYDPAT---ETWTELC---PMIEARKNHGLVFV-----KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKM- 230 (306)
T ss_dssp ---EECCCEEEEETTT---TEEEEEC---CCSSCCBSCEEEEE-----TTEEEEECCEETTEEBCCEEEEETTTTEEEE-
T ss_pred ---cccceEEEeCCCC---CeEEECC---CccchhhcceEEEE-----CCEEEEEeCCCCCCCCceEEEeeCCCCcEEE-
Confidence 3488999999987 6999954 68899999999999 9999999998655 47899999999999999
Q ss_pred ccCCCCCCCCceeeEEEECCEEEEEcCcccCCCccccccccccceecCceEEeecCCCeeeecccccccCCCCCCCCCcc
Q psy1098 241 QILGPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHC 320 (390)
Q Consensus 241 ~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~ 320 (390)
...+|.+|..|++++++++|||+||.+... ..+++++||+++++|+.++. +|.+|.+|+
T Consensus 231 --~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-------------~~~~~~~yd~~~~~W~~~~~------~~~~r~~~~ 289 (306)
T 3ii7_A 231 --VSPMPWKGVTVKCAAVGSIVYVLAGFQGVG-------------RLGHILEYNTETDKWVANSK------VRAFPVTSC 289 (306)
T ss_dssp --CCCCSCCBSCCEEEEETTEEEEEECBCSSS-------------BCCEEEEEETTTTEEEEEEE------EECCSCTTC
T ss_pred --CCCCCCCccceeEEEECCEEEEEeCcCCCe-------------eeeeEEEEcCCCCeEEeCCC------cccccceeE
Confidence 568999999999999999999999986432 26799999999999999988 999999999
Q ss_pred eeeeCC
Q psy1098 321 ASVINS 326 (390)
Q Consensus 321 ~~~~~~ 326 (390)
++.+.+
T Consensus 290 ~~~~~~ 295 (306)
T 3ii7_A 290 LICVVD 295 (306)
T ss_dssp EEEEEE
T ss_pred EEEECC
Confidence 998754
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=7.6e-44 Score=324.77 Aligned_cols=264 Identities=20% Similarity=0.360 Sum_probs=234.6
Q ss_pred CCCCCCCCCceeEEecCCCCCCCCCCCceeeeEEeCCEEEEEccC----CC-CcccceEEEECCCCcEEeeeecCCCCCC
Q psy1098 2 DKLSDDNCPVYRWRRIDDPAGPQPRPRHGHRAVAIKDLMLVFGGG----NE-GIVEELHVFNTATNQWFIPTLKGDIPPG 76 (390)
Q Consensus 2 ~~~~~~~~~~~~W~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~----~~-~~~~~~~~~d~~~~~W~~~~~~~~~p~~ 76 (390)
.++..||+.+++|+.++ .+|.+|.+|++++++++|||+||. .. ...+++++||+.+++|+.++ .+|.+
T Consensus 39 ~~~~~~d~~~~~W~~~~----~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~ 111 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLA----DLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCA---PMSVP 111 (308)
T ss_dssp CCEEEEETTTTEEEECC----CCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECC---CCSSC
T ss_pred ceEEEEcCCCCeEeECC----CCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECC---CCCcC
Confidence 46778999999999997 789999999999999999999996 22 35689999999999999998 78999
Q ss_pred CceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCC
Q psy1098 77 CAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGD 156 (390)
Q Consensus 77 r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~ 156 (390)
|..|+++..+++||++||... ....+++++||+.+++|++++++ |.+|..|+++.++++||++||....
T Consensus 112 r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~-------p~~r~~~~~~~~~~~iyv~GG~~~~--- 180 (308)
T 1zgk_A 112 RNRIGVGVIDGHIYAVGGSHG-CIHHNSVERYEPERDEWHLVAPM-------LTRRIGVGVAVLNRLLYAVGGFDGT--- 180 (308)
T ss_dssp CBTCEEEEETTEEEEECCEET-TEECCCEEEEETTTTEEEECCCC-------SSCCBSCEEEEETTEEEEECCBCSS---
T ss_pred ccccEEEEECCEEEEEcCCCC-CcccccEEEECCCCCeEeECCCC-------CccccceEEEEECCEEEEEeCCCCC---
Confidence 999999999999999999875 35678999999999999999864 5899999999999999999998765
Q ss_pred CCCCCCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCC-ccCcEEEEecCCC
Q psy1098 157 ETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGN-RLSDLFMLDINSM 235 (390)
Q Consensus 157 ~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~-~~~~v~~~d~~~~ 235 (390)
...++++.||+.+ ++|+.+ ..+|.+|..|+++.+ +++|||+||..+. ..+++++||+.++
T Consensus 181 --------~~~~~~~~yd~~~---~~W~~~---~~~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 181 --------NRLNSAECYYPER---NEWRMI---TAMNTIRSGAGVCVL-----HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp --------CBCCCEEEEETTT---TEEEEC---CCCSSCCBSCEEEEE-----TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred --------CcCceEEEEeCCC---CeEeeC---CCCCCccccceEEEE-----CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 4578899999987 799984 468899999999998 9999999998765 3789999999999
Q ss_pred eEeecccCCCCCCCCceeeEEEECCEEEEEcCcccCCCccccccccccceecCceEEeecCCCeeeecccccccCCCCCC
Q psy1098 236 TWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKP 315 (390)
Q Consensus 236 ~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~ 315 (390)
+|++ ...+|.+|..|++++++++|||+||.+... ..+++++||+++++|++++. +|.+
T Consensus 242 ~W~~---~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-------------~~~~v~~yd~~~~~W~~~~~------~p~~ 299 (308)
T 1zgk_A 242 TWTF---VAPMKHRRSALGITVHQGRIYVLGGYDGHT-------------FLDSVECYDPDTDTWSEVTR------MTSG 299 (308)
T ss_dssp EEEE---CCCCSSCCBSCEEEEETTEEEEECCBCSSC-------------BCCEEEEEETTTTEEEEEEE------CSSC
T ss_pred cEEE---CCCCCCCccceEEEEECCEEEEEcCcCCCc-------------ccceEEEEcCCCCEEeecCC------CCCC
Confidence 9999 557899999999999999999999975421 26799999999999999987 9999
Q ss_pred CCCcceeee
Q psy1098 316 RAGHCASVI 324 (390)
Q Consensus 316 r~~~~~~~~ 324 (390)
|.+|+++++
T Consensus 300 r~~~~~~~l 308 (308)
T 1zgk_A 300 RSGVGVAVT 308 (308)
T ss_dssp CBSCEEEEC
T ss_pred cccceeEeC
Confidence 999999864
No 5
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=7.5e-43 Score=317.27 Aligned_cols=268 Identities=17% Similarity=0.258 Sum_probs=226.4
Q ss_pred eeEEeCCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcC
Q psy1098 32 RAVAIKDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQAS 111 (390)
Q Consensus 32 ~~~~~~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~ 111 (390)
..+.+++.||++||......+++++||+.+++|+.+. .+|.+|..|+++..+++||++||.... ...+++++||+.
T Consensus 10 ~~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~ 85 (302)
T 2xn4_A 10 TPMNLPKLMVVVGGQAPKAIRSVECYDFKEERWHQVA---ELPSRRCRAGMVYMAGLVFAVGGFNGS-LRVRTVDSYDPV 85 (302)
T ss_dssp -----CEEEEEECCBSSSBCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEESCBCSS-SBCCCEEEEETT
T ss_pred cccCCCCEEEEECCCCCCCCCcEEEEcCcCCcEeEcc---cCCcccccceEEEECCEEEEEeCcCCC-ccccceEEECCC
Confidence 3445688999999987777889999999999999987 789999999999999999999998643 456899999999
Q ss_pred cceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCC
Q psy1098 112 KWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGG 191 (390)
Q Consensus 112 ~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~ 191 (390)
+++|++++++ |.+|..|+++.++++||++||.... ..++++++||+.+ ++|+.+ ++
T Consensus 86 ~~~W~~~~~~-------p~~r~~~~~~~~~~~iyv~GG~~~~-----------~~~~~~~~~d~~~---~~W~~~---~~ 141 (302)
T 2xn4_A 86 KDQWTSVANM-------RDRRSTLGAAVLNGLLYAVGGFDGS-----------TGLSSVEAYNIKS---NEWFHV---AP 141 (302)
T ss_dssp TTEEEEECCC-------SSCCBSCEEEEETTEEEEEEEECSS-----------CEEEEEEEEETTT---TEEEEE---CC
T ss_pred CCceeeCCCC-------CccccceEEEEECCEEEEEcCCCCC-----------ccCceEEEEeCCC---CeEeec---CC
Confidence 9999999875 5899999999999999999998764 6688999999987 799995 46
Q ss_pred CCCCCceeeeEEeeccCCCcEEEEEcCCCCCc---cCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCc
Q psy1098 192 LPSPRESHTACSWTDEYKNTKLIIYGGMSGNR---LSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGW 268 (390)
Q Consensus 192 ~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~---~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~ 268 (390)
+|.+|..|+++.+ +++||++||.++.. ++++++||+.+++|+.+ ..+|.+|..|++++++++|||+||.
T Consensus 142 ~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~iyv~GG~ 213 (302)
T 2xn4_A 142 MNTRRSSVGVGVV-----GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYI---AEMSTRRSGAGVGVLNNLLYAVGGH 213 (302)
T ss_dssp CSSCCBSCEEEEE-----TTEEEEECCEETTTTEECCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEEEECCB
T ss_pred CCCcccCceEEEE-----CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEEC---CCCccccccccEEEECCEEEEECCC
Confidence 8899999999998 99999999986542 78999999999999994 5789999999999999999999997
Q ss_pred ccCCCccccccccccceecCceEEeecCCCeeeecccccccCCCCCCCCCcceeeeCCEEEEEeccCCccc--cccceee
Q psy1098 269 VPILKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVINSRMYIWSGRDDYKK--AWNNQVC 346 (390)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~--~~~~~~~ 346 (390)
+... ..+++++||+++++|+.++. +|.+|.+|+++.++++|||+||.++... ....+.+
T Consensus 214 ~~~~-------------~~~~~~~yd~~~~~W~~~~~------~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 214 DGPL-------------VRKSVEVYDPTTNAWRQVAD------MNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp SSSS-------------BCCCEEEEETTTTEEEEECC------CSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEET
T ss_pred CCCc-------------ccceEEEEeCCCCCEeeCCC------CCCccccCeEEEECCEEEEECCcCCCcccccEEEEcC
Confidence 5421 26789999999999999987 9999999999999999999999875421 1122333
Q ss_pred eCeeEEEE
Q psy1098 347 CKDLWYLE 354 (390)
Q Consensus 347 ~~d~w~~~ 354 (390)
.++.|...
T Consensus 275 ~~~~W~~~ 282 (302)
T 2xn4_A 275 TTDKWTVV 282 (302)
T ss_dssp TTTEEEEC
T ss_pred CCCeEEEC
Confidence 45666654
No 6
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=3.7e-44 Score=327.86 Aligned_cols=283 Identities=16% Similarity=0.246 Sum_probs=237.0
Q ss_pred CCCCCCCCceeEEecCCCCCCCCCCCceeeeEEeCCEEEEEccC-----C--CCcccceEEEECCCCcEEeeeecCCCCC
Q psy1098 3 KLSDDNCPVYRWRRIDDPAGPQPRPRHGHRAVAIKDLMLVFGGG-----N--EGIVEELHVFNTATNQWFIPTLKGDIPP 75 (390)
Q Consensus 3 ~~~~~~~~~~~W~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~-----~--~~~~~~~~~~d~~~~~W~~~~~~~~~p~ 75 (390)
++..||+.+++|+. +. .+.|.+|.+|++++++++|||+||. . ....+++++||+.+++|+.++ ++|.
T Consensus 14 ~~~~yd~~~~~W~~-~~--~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~ 87 (315)
T 4asc_A 14 GAVAYDPAANECYC-AS--LSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP---PLPS 87 (315)
T ss_dssp EEEEEETTTTEEEE-EE--CCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC---CBSS
T ss_pred ceEEECCCCCeEec-CC--CCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC---CCCc
Confidence 56789999999986 31 1336699999999999999999994 1 123466999999999999987 7899
Q ss_pred CCceeeEEEeCCEEEEEcceeC--CceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCC
Q psy1098 76 GCAAYGIVVDNTRVLIFGGMVE--YGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANS 153 (390)
Q Consensus 76 ~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~ 153 (390)
+|..|+++..+++||++||... .....+++++||+.+++|++++++ |.+|..|+++.++++||++||....
T Consensus 88 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~-------p~~r~~~~~~~~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 88 PRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPL-------PYVVYGHTVLSHMDLVYVIGGKGSD 160 (315)
T ss_dssp CEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCC-------SSCCBSCEEEEETTEEEEECCBCTT
T ss_pred chhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCC-------CCcccceeEEEECCEEEEEeCCCCC
Confidence 9999999999999999999863 356789999999999999998874 5889999999999999999998543
Q ss_pred CCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCC-ccCcEEEEec
Q psy1098 154 GGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGN-RLSDLFMLDI 232 (390)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~-~~~~v~~~d~ 232 (390)
. ...+++++||+.+ ++|+.+ +++|.+|..|+++.+ +++|||+||..+. .++++++||+
T Consensus 161 ~----------~~~~~~~~yd~~~---~~W~~~---~~~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~~yd~ 219 (315)
T 4asc_A 161 R----------KCLNKMCVYDPKK---FEWKEL---APMQTARSLFGATVH-----DGRIIVAAGVTDTGLTSSAEVYSI 219 (315)
T ss_dssp S----------CBCCCEEEEETTT---TEEEEC---CCCSSCCBSCEEEEE-----TTEEEEEEEECSSSEEEEEEEEET
T ss_pred C----------cccceEEEEeCCC---CeEEEC---CCCCCchhceEEEEE-----CCEEEEEeccCCCCccceEEEEEC
Confidence 3 6788999999987 699994 468999999999998 9999999998765 3789999999
Q ss_pred CCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCcccCCCccccccccccceecCceEEeecCCCeeeecccccccCCC
Q psy1098 233 NSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFL 312 (390)
Q Consensus 233 ~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~ 312 (390)
.+++|+. ...+|.+|..|+++.++++|||+||.+.....+. .......+++++||+++++|+++.
T Consensus 220 ~~~~W~~---~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~----~~~~~~~~~v~~yd~~~~~W~~~~-------- 284 (315)
T 4asc_A 220 TDNKWAP---FEAFPQERSSLSLVSLVGTLYAIGGFATLETESG----ELVPTELNDIWRYNEEEKKWEGVL-------- 284 (315)
T ss_dssp TTTEEEE---ECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTS----CEEEEEEEEEEEEETTTTEEEEEE--------
T ss_pred CCCeEEE---CCCCCCcccceeEEEECCEEEEECCccccCcCCc----cccccccCcEEEecCCCChhhhhc--------
Confidence 9999999 4578999999999999999999999854211000 000123679999999999999984
Q ss_pred CCCCCCcceeeeCCEEEEEecc
Q psy1098 313 PKPRAGHCASVINSRMYIWSGR 334 (390)
Q Consensus 313 p~~r~~~~~~~~~~~l~v~GG~ 334 (390)
|.+|.+|++++++++||++...
T Consensus 285 ~~~r~~~~~~~~~~~l~v~~~~ 306 (315)
T 4asc_A 285 REIAYAAGATFLPVRLNVLRLT 306 (315)
T ss_dssp SCSSCCSSCEEEEEEECGGGSE
T ss_pred cCCcCccceEEeCCEEEEEEeh
Confidence 3579999999999999998654
No 7
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=3.1e-43 Score=319.58 Aligned_cols=265 Identities=16% Similarity=0.320 Sum_probs=235.9
Q ss_pred CCCCCCCCCceeEEecCCCCCCCCCCCceeeeEEeCCEEEEEccCCC-CcccceEEEECCCCc---EEeeeecCCCCCCC
Q psy1098 2 DKLSDDNCPVYRWRRIDDPAGPQPRPRHGHRAVAIKDLMLVFGGGNE-GIVEELHVFNTATNQ---WFIPTLKGDIPPGC 77 (390)
Q Consensus 2 ~~~~~~~~~~~~W~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~d~~~~~---W~~~~~~~~~p~~r 77 (390)
+++..||+.+++|+.++ .+|.+|.+|+++.++++|||+||... ...+++++||+.+++ |+.++ .+|.+|
T Consensus 31 ~~~~~~d~~~~~W~~~~----~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~---~~p~~r 103 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLP----SITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVA---PMNVRR 103 (301)
T ss_dssp CCEEEEETTTTEEEECC----CCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEEC---CCSSCC
T ss_pred eEEEEEcCCCCeEEeCC----CCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECC---CCCCCc
Confidence 56788999999999997 78889999999999999999999653 367899999999999 99997 789999
Q ss_pred ceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCC
Q psy1098 78 AAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDE 157 (390)
Q Consensus 78 ~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~ 157 (390)
..|+++..+++||++||.... ...+++++||+.+++|+.++++ |.+|..|+++.++++||++||.+..
T Consensus 104 ~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~-------p~~r~~~~~~~~~~~iyv~GG~~~~---- 171 (301)
T 2vpj_A 104 GLAGATTLGDMIYVSGGFDGS-RRHTSMERYDPNIDQWSMLGDM-------QTAREGAGLVVASGVIYCLGGYDGL---- 171 (301)
T ss_dssp BSCEEEEETTEEEEECCBCSS-CBCCEEEEEETTTTEEEEEEEC-------SSCCBSCEEEEETTEEEEECCBCSS----
T ss_pred cceeEEEECCEEEEEcccCCC-cccceEEEEcCCCCeEEECCCC-------CCCcccceEEEECCEEEEECCCCCC----
Confidence 999999999999999998743 3578999999999999999875 4889999999999999999998765
Q ss_pred CCCCCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCc-cCcEEEEecCCCe
Q psy1098 158 TKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNR-LSDLFMLDINSMT 236 (390)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~-~~~v~~~d~~~~~ 236 (390)
...+++++||+.+ ++|+.+ +.+|.+|..|+++.. +++|||+||.++.. .+++++||+.+++
T Consensus 172 -------~~~~~~~~~d~~~---~~W~~~---~~~p~~r~~~~~~~~-----~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 172 -------NILNSVEKYDPHT---GHWTNV---TPMATKRSGAGVALL-----NDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp -------CBCCCEEEEETTT---TEEEEE---CCCSSCCBSCEEEEE-----TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred -------cccceEEEEeCCC---CcEEeC---CCCCcccccceEEEE-----CCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 5688999999987 699985 468899999999998 89999999987654 7899999999999
Q ss_pred EeecccCCCCCCCCceeeEEEECCEEEEEcCcccCCCccccccccccceecCceEEeecCCCeeeecccccccCCCCCCC
Q psy1098 237 WQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPR 316 (390)
Q Consensus 237 W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r 316 (390)
|+. ...+|.+|..|++++++++|||+||.+... ..+++++||+++++|+.+.. +|.+|
T Consensus 234 W~~---~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-------------~~~~v~~yd~~~~~W~~~~~------~~~~r 291 (301)
T 2vpj_A 234 WTT---VTSMTTPRCYVGATVLRGRLYAIAGYDGNS-------------LLSSIECYDPIIDSWEVVTS------MGTQR 291 (301)
T ss_dssp EEE---ECCCSSCCBSCEEEEETTEEEEECCBCSSS-------------BEEEEEEEETTTTEEEEEEE------EEEEE
T ss_pred EEE---CCCCCCcccceeEEEECCEEEEEcCcCCCc-------------ccccEEEEcCCCCeEEEcCC------CCccc
Confidence 999 457899999999999999999999975432 25789999999999999988 99999
Q ss_pred CCcceeeeC
Q psy1098 317 AGHCASVIN 325 (390)
Q Consensus 317 ~~~~~~~~~ 325 (390)
.+|+++.++
T Consensus 292 ~~~~~~~~~ 300 (301)
T 2vpj_A 292 CDAGVCVLR 300 (301)
T ss_dssp ESCEEEEEE
T ss_pred ccceEEEeC
Confidence 999999874
No 8
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=316.16 Aligned_cols=266 Identities=19% Similarity=0.229 Sum_probs=225.9
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcceeE
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKWEWK 116 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~ 116 (390)
.+.||++||... .+++++||+.+++|+.++ .+|.+|.+|+++..+++||++||.. ....+++++||+.+++|+
T Consensus 11 ~~~l~~~GG~~~--~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~ 83 (306)
T 3ii7_A 11 HDYRIALFGGSQ--PQSCRYFNPKDYSWTDIR---CPFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKDSWY 83 (306)
T ss_dssp CCEEEEEECCSS--TTSEEEEETTTTEEEECC---CCSCCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEETTTTEEE
T ss_pred cceEEEEeCCCC--CceEEEecCCCCCEecCC---CCCcccceeEEEEECCEEEEEeCCC--CCCcceEEEEeCCCCeEE
Confidence 478999999665 789999999999999987 7899999999999999999999986 556789999999999999
Q ss_pred EecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCCCC
Q psy1098 117 RLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPR 196 (390)
Q Consensus 117 ~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r 196 (390)
.++++ |.+|..|+++.++++||++||.+... ...+++++||+.+ ++|+.+ +.+|.+|
T Consensus 84 ~~~~~-------p~~r~~~~~~~~~~~iyv~GG~~~~~----------~~~~~~~~~d~~~---~~W~~~---~~~p~~r 140 (306)
T 3ii7_A 84 SKLGP-------PTPRDSLAACAAEGKIYTSGGSEVGN----------SALYLFECYDTRT---ESWHTK---PSMLTQR 140 (306)
T ss_dssp EEECC-------SSCCBSCEEEEETTEEEEECCBBTTB----------SCCCCEEEEETTT---TEEEEE---CCCSSCC
T ss_pred ECCCC-------CccccceeEEEECCEEEEECCCCCCC----------cEeeeEEEEeCCC---CceEeC---CCCcCCc
Confidence 99875 58999999999999999999987332 6788999999987 689985 5689999
Q ss_pred ceeeeEEeeccCCCcEEEEEcCCCCCc-----cCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCcccC
Q psy1098 197 ESHTACSWTDEYKNTKLIIYGGMSGNR-----LSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPI 271 (390)
Q Consensus 197 ~~~~~~~~~~~~~~~~i~v~GG~~~~~-----~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~ 271 (390)
..|+++.. +++||++||..+.. ++++++||+.+++|+.+ ..+|.+|..|++++++++|||+||.+..
T Consensus 141 ~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~i~v~GG~~~~ 212 (306)
T 3ii7_A 141 CSHGMVEA-----NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTEL---CPMIEARKNHGLVFVKDKIFAVGGQNGL 212 (306)
T ss_dssp BSCEEEEE-----TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEEEECCEETT
T ss_pred ceeEEEEE-----CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEEC---CCccchhhcceEEEECCEEEEEeCCCCC
Confidence 99999998 99999999975442 78999999999999994 5789999999999999999999997543
Q ss_pred CCccccccccccceecCceEEeecCCCeeeecccccccCCCCCCCCCcceeeeCCEEEEEeccCCcccc--ccceeeeCe
Q psy1098 272 LKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVINSRMYIWSGRDDYKKA--WNNQVCCKD 349 (390)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~--~~~~~~~~d 349 (390)
. ..+++++||+.+++|+.++. +|.+|.+|+++.++++|||+||.++.... ...+.+..+
T Consensus 213 ~-------------~~~~~~~yd~~~~~W~~~~~------~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 213 G-------------GLDNVEYYDIKLNEWKMVSP------MPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp E-------------EBCCEEEEETTTTEEEECCC------CSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred C-------------CCceEEEeeCCCCcEEECCC------CCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 1 26899999999999999987 99999999999999999999998754311 111223355
Q ss_pred eEEEEecCCC
Q psy1098 350 LWYLEVEKPG 359 (390)
Q Consensus 350 ~w~~~~~~~~ 359 (390)
.|....++|.
T Consensus 274 ~W~~~~~~~~ 283 (306)
T 3ii7_A 274 KWVANSKVRA 283 (306)
T ss_dssp EEEEEEEEEC
T ss_pred eEEeCCCccc
Confidence 5655444443
No 9
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.3e-42 Score=323.21 Aligned_cols=302 Identities=17% Similarity=0.218 Sum_probs=226.8
Q ss_pred CCCCCCceeeeEEeCCEEEEEccCCCCcccceEEEECC--CCcEEeeeecCCCC-CCCceeeEEEeCCEEEEEcceeC--
Q psy1098 23 PQPRPRHGHRAVAIKDLMLVFGGGNEGIVEELHVFNTA--TNQWFIPTLKGDIP-PGCAAYGIVVDNTRVLIFGGMVE-- 97 (390)
Q Consensus 23 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~d~~--~~~W~~~~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~-- 97 (390)
.+|.+|.+|++++++++|||+||... +++++||+. +++|+.++ .+| .+|..|++++++++||++||...
T Consensus 5 ~lP~~r~~~~~~~~~~~iyv~GG~~~---~~~~~~d~~~~~~~W~~~~---~~p~~~R~~~~~~~~~~~lyv~GG~~~~~ 78 (357)
T 2uvk_A 5 ETPVPFKSGTGAIDNDTVYIGLGSAG---TAWYKLDTQAKDKKWTALA---AFPGGPRDQATSAFIDGNLYVFGGIGKNS 78 (357)
T ss_dssp CCSSCCCSCEEEEETTEEEEECGGGT---TCEEEEETTSSSCCEEECC---CCTTCCCBSCEEEEETTEEEEECCEEECT
T ss_pred CCCccccceEEEEECCEEEEEeCcCC---CeEEEEccccCCCCeeECC---CCCCCcCccceEEEECCEEEEEcCCCCCC
Confidence 78999999999999999999999653 589999997 49999988 788 89999999999999999999832
Q ss_pred --CceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCC------------------
Q psy1098 98 --YGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDE------------------ 157 (390)
Q Consensus 98 --~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~------------------ 157 (390)
.....+++++||+.+++|+++++++ |.+|..|+++.++++||++||......+.
T Consensus 79 ~~~~~~~~~v~~yd~~~~~W~~~~~~~------p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
T 2uvk_A 79 EGLTQVFNDVHKYNPKTNSWVKLMSHA------PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKI 152 (357)
T ss_dssp TSCEEECCCEEEEETTTTEEEECSCCC------SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CccceeeccEEEEeCCCCcEEECCCCC------CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhh
Confidence 3456899999999999999998763 58999999999999999999976421000
Q ss_pred -----CCCCCccccccceeeeecCCCceeeeeccccCCCCCCCCc-eeeeEEeeccCCCcEEEEEcCCCCC--ccCcEEE
Q psy1098 158 -----TKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRE-SHTACSWTDEYKNTKLIIYGGMSGN--RLSDLFM 229 (390)
Q Consensus 158 -----~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~-~~~~~~~~~~~~~~~i~v~GG~~~~--~~~~v~~ 229 (390)
......+.+++++++||+.+ ++|+.+. ++|.++. .|+++.. +++|||+||..+. ..+++++
T Consensus 153 ~~~~~~~~~~~~~~~~~v~~yd~~~---~~W~~~~---~~p~~~~~~~~~~~~-----~~~iyv~GG~~~~~~~~~~v~~ 221 (357)
T 2uvk_A 153 NAHYFDKKAEDYFFNKFLLSFDPST---QQWSYAG---ESPWYGTAGAAVVNK-----GDKTWLINGEAKPGLRTDAVFE 221 (357)
T ss_dssp HHHHHSSCGGGGCCCCEEEEEETTT---TEEEEEE---ECSSCCCBSCEEEEE-----TTEEEEECCEEETTEECCCEEE
T ss_pred hhhhccccccccCCcccEEEEeCCC---CcEEECC---CCCCCCcccccEEEE-----CCEEEEEeeecCCCcccCceEE
Confidence 00000012468899999987 7999964 4676554 4888888 9999999997543 4788999
Q ss_pred Eec--CCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCcccCCCccccc--cc--cccceecCceEEeecCCCeeeec
Q psy1098 230 LDI--NSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRS--LH--EKEWKCSNQLACLHLPEMTWEDL 303 (390)
Q Consensus 230 ~d~--~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~--~~--~~~~~~~~~~~~~d~~~~~W~~v 303 (390)
||+ .+++|+.+... +.|.+|..|++++++++|||+||.+......... .. ........++++||+++++|+++
T Consensus 222 ~d~d~~~~~W~~~~~~-~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~ 300 (357)
T 2uvk_A 222 LDFTGNNLKWNKLAPV-SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKS 300 (357)
T ss_dssp EECC---CEEEECCCS-STTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEE
T ss_pred EEecCCCCcEEecCCC-CCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeC
Confidence 986 89999995422 2334466788999999999999975432100000 00 00011246899999999999999
Q ss_pred ccccccCCCCCCCCCcceeeeCCEEEEEeccCCccccccceeeeCeeEEEEecCCCC
Q psy1098 304 SVEVTDDFLPKPRAGHCASVINSRMYIWSGRDDYKKAWNNQVCCKDLWYLEVEKPGP 360 (390)
Q Consensus 304 ~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~d~w~~~~~~~~~ 360 (390)
.. +|.+|.+|+++.++++|||+||.+.... ..+|+|.++++..++
T Consensus 301 ~~------~p~~r~~~~~~~~~~~i~v~GG~~~~~~------~~~~v~~l~~~~~~~ 345 (357)
T 2uvk_A 301 GE------LSQGRAYGVSLPWNNSLLIIGGETAGGK------AVTDSVLITVKDNKV 345 (357)
T ss_dssp EE------CSSCCBSSEEEEETTEEEEEEEECGGGC------EEEEEEEEEC-CCSC
T ss_pred CC------CCCCcccceeEEeCCEEEEEeeeCCCCC------EeeeEEEEEEcCcEe
Confidence 87 9999999999999999999999975432 458899888775444
No 10
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=5.5e-43 Score=320.54 Aligned_cols=280 Identities=15% Similarity=0.263 Sum_probs=234.4
Q ss_pred CCCCCCCceeEEecCCCCCCCCCCCceeeeEEeCCEEEEEccCCC-------CcccceEEEECCCCcEEeeeecCCCCCC
Q psy1098 4 LSDDNCPVYRWRRIDDPAGPQPRPRHGHRAVAIKDLMLVFGGGNE-------GIVEELHVFNTATNQWFIPTLKGDIPPG 76 (390)
Q Consensus 4 ~~~~~~~~~~W~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-------~~~~~~~~~d~~~~~W~~~~~~~~~p~~ 76 (390)
+..||+.+++|+... .+.|.+|.+|+++.++++|||+||... ...+.+++||+.+++|+.++ .+|.+
T Consensus 26 ~~~yd~~~~~W~~~~---~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~ 99 (318)
T 2woz_A 26 AVAYDPMENECYLTA---LAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP---PLPSA 99 (318)
T ss_dssp EEEEETTTTEEEEEE---ECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS---CBSSC
T ss_pred eEEECCCCCceeccc---CCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC---CCCcc
Confidence 467899999999842 134578999999999999999999521 12345999999999999987 78999
Q ss_pred CceeeEEEeCCEEEEEcceeC-CceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCC
Q psy1098 77 CAAYGIVVDNTRVLIFGGMVE-YGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGG 155 (390)
Q Consensus 77 r~~~~~~~~~~~iyv~GG~~~-~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~ 155 (390)
|..|++++.+++||++||... .....+++++||+.+++|++++++ |.+|.+|+++.++++||++||.....
T Consensus 100 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~-------p~~r~~~~~~~~~~~iyv~GG~~~~~- 171 (318)
T 2woz_A 100 RCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNL-------PIKVYGHNVISHNGMIYCLGGKTDDK- 171 (318)
T ss_dssp BCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCC-------SSCEESCEEEEETTEEEEECCEESSS-
T ss_pred ccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCC-------CCcccccEEEEECCEEEEEcCCCCCC-
Confidence 999999999999999999973 445678999999999999999864 58899999999999999999986543
Q ss_pred CCCCCCCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCC-ccCcEEEEecCC
Q psy1098 156 DETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGN-RLSDLFMLDINS 234 (390)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~-~~~~v~~~d~~~ 234 (390)
...+++++||+.+ ++|+.+ +++|.+|..|+++.+ +++|||+||..+. ..+++++||+.+
T Consensus 172 ---------~~~~~~~~yd~~~---~~W~~~---~~~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 172 ---------KCTNRVFIYNPKK---GDWKDL---APMKTPRSMFGVAIH-----KGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp ---------CBCCCEEEEETTT---TEEEEE---CCCSSCCBSCEEEEE-----TTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred ---------CccceEEEEcCCC---CEEEEC---CCCCCCcccceEEEE-----CCEEEEEcCcCCCCccceEEEEECCC
Confidence 6788999999987 689995 468899999999998 8999999998655 368899999999
Q ss_pred CeEeecccCCCCCCCCceeeEEEECCEEEEEcCcccCCCccccccccccceecCceEEeecCCCeeeecccccccCCCCC
Q psy1098 235 MTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPK 314 (390)
Q Consensus 235 ~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~ 314 (390)
++|+. ...+|.+|..|++++++++|||+||.+........ ......+++++||+++++|+++ +|.
T Consensus 232 ~~W~~---~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~----~~~~~~~~v~~yd~~~~~W~~~--------~~~ 296 (318)
T 2woz_A 232 NKWEV---MTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKE----FAPTEVNDIWKYEDDKKEWAGM--------LKE 296 (318)
T ss_dssp CCEEE---CCCCSSCCBSCEEEEETTEEEEECCBCCBC----C----CBCCBCCCEEEEETTTTEEEEE--------ESC
T ss_pred CeEEE---CCCCCCcccceEEEEECCEEEEECCeeccCCCCce----eccceeeeEEEEeCCCCEehhh--------ccc
Confidence 99999 56789999999999999999999998653211100 0012368999999999999998 357
Q ss_pred CCCCcceeeeCCEEEEEe
Q psy1098 315 PRAGHCASVINSRMYIWS 332 (390)
Q Consensus 315 ~r~~~~~~~~~~~l~v~G 332 (390)
+|++|+++.++++|||+.
T Consensus 297 ~r~~~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 297 IRYASGASCLATRLNLFK 314 (318)
T ss_dssp CGGGTTCEEEEEEEEGGG
T ss_pred ccccccceeeCCEEEEEE
Confidence 899999999999999874
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=4.5e-42 Score=311.96 Aligned_cols=260 Identities=19% Similarity=0.341 Sum_probs=224.6
Q ss_pred EeCCEEEEEcc-CCC-CcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCc
Q psy1098 35 AIKDLMLVFGG-GNE-GIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASK 112 (390)
Q Consensus 35 ~~~~~iyv~GG-~~~-~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~ 112 (390)
.++++||++|| ... ...+++++||+.+++|+.++ .+|.+|..|+++..+++||++||.. .....+++++||+.+
T Consensus 12 ~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~l~v~GG~~-~~~~~~~~~~~d~~~ 87 (301)
T 2vpj_A 12 GANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLP---SITRKRRYVASVSLHDRIYVIGGYD-GRSRLSSVECLDYTA 87 (301)
T ss_dssp -CCEEEEEECCEETTTEECCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBC-SSCBCCCEEEEETTC
T ss_pred cCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCC---CCChhhccccEEEECCEEEEEcCCC-CCccCceEEEEECCC
Confidence 36889999999 543 46789999999999999988 7888999999999999999999986 345678999999999
Q ss_pred ce---eEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccC
Q psy1098 113 WE---WKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTY 189 (390)
Q Consensus 113 ~~---W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~ 189 (390)
++ |++++++ |.+|..|+++.++++||++||.... ...+++++||+.+ ++|+.+.
T Consensus 88 ~~~~~W~~~~~~-------p~~r~~~~~~~~~~~lyv~GG~~~~-----------~~~~~~~~~d~~~---~~W~~~~-- 144 (301)
T 2vpj_A 88 DEDGVWYSVAPM-------NVRRGLAGATTLGDMIYVSGGFDGS-----------RRHTSMERYDPNI---DQWSMLG-- 144 (301)
T ss_dssp CTTCCCEEECCC-------SSCCBSCEEEEETTEEEEECCBCSS-----------CBCCEEEEEETTT---TEEEEEE--
T ss_pred CCCCeeEECCCC-------CCCccceeEEEECCEEEEEcccCCC-----------cccceEEEEcCCC---CeEEECC--
Confidence 99 9999764 5899999999999999999998754 5678999999987 6899954
Q ss_pred CCCCCCCceeeeEEeeccCCCcEEEEEcCCCCC-ccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCc
Q psy1098 190 GGLPSPRESHTACSWTDEYKNTKLIIYGGMSGN-RLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGW 268 (390)
Q Consensus 190 ~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~-~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~ 268 (390)
++|.+|..|+++.. +++||++||.++. .++++++||+.+++|+.+ ..+|.+|..|+++.++++|||+||.
T Consensus 145 -~~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~~~~i~v~GG~ 215 (301)
T 2vpj_A 145 -DMQTAREGAGLVVA-----SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV---TPMATKRSGAGVALLNDHIYVVGGF 215 (301)
T ss_dssp -ECSSCCBSCEEEEE-----TTEEEEECCBCSSCBCCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEEEECCB
T ss_pred -CCCCCcccceEEEE-----CCEEEEECCCCCCcccceEEEEeCCCCcEEeC---CCCCcccccceEEEECCEEEEEeCC
Confidence 57889999999998 9999999998765 478999999999999994 5789999999999999999999998
Q ss_pred ccCCCccccccccccceecCceEEeecCCCeeeecccccccCCCCCCCCCcceeeeCCEEEEEeccCCccccccceeeeC
Q psy1098 269 VPILKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVINSRMYIWSGRDDYKKAWNNQVCCK 348 (390)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 348 (390)
+... ..+++++||+++++|++++. +|.+|.+|+++.++++|||+||.++.. ..+
T Consensus 216 ~~~~-------------~~~~v~~yd~~~~~W~~~~~------~p~~r~~~~~~~~~~~i~v~GG~~~~~-------~~~ 269 (301)
T 2vpj_A 216 DGTA-------------HLSSVEAYNIRTDSWTTVTS------MTTPRCYVGATVLRGRLYAIAGYDGNS-------LLS 269 (301)
T ss_dssp CSSS-------------BCCCEEEEETTTTEEEEECC------CSSCCBSCEEEEETTEEEEECCBCSSS-------BEE
T ss_pred CCCc-------------ccceEEEEeCCCCcEEECCC------CCCcccceeEEEECCEEEEEcCcCCCc-------ccc
Confidence 6432 26799999999999999987 999999999999999999999987542 234
Q ss_pred eeEEEEec
Q psy1098 349 DLWYLEVE 356 (390)
Q Consensus 349 d~w~~~~~ 356 (390)
++|.++++
T Consensus 270 ~v~~yd~~ 277 (301)
T 2vpj_A 270 SIECYDPI 277 (301)
T ss_dssp EEEEEETT
T ss_pred cEEEEcCC
Confidence 55555544
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=302.64 Aligned_cols=244 Identities=20% Similarity=0.372 Sum_probs=209.4
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEccee-----CCceeecceEEEEcC
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMV-----EYGKYSSDLYELQAS 111 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~-----~~~~~~~~v~~~d~~ 111 (390)
.+.||++|| +++++||+.+++|..... +.|.+|.+|++++.+++||++||.. ......+++++||+.
T Consensus 4 ~~~l~~~GG------~~~~~yd~~~~~W~~~~~--~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~ 75 (315)
T 4asc_A 4 QDLIFMISE------EGAVAYDPAANECYCASL--SSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL 75 (315)
T ss_dssp EEEEEEEET------TEEEEEETTTTEEEEEEC--CCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT
T ss_pred ceEEEEEcC------CceEEECCCCCeEecCCC--CCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC
Confidence 467999999 689999999999987331 2366899999999999999999973 223446779999999
Q ss_pred cceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCC
Q psy1098 112 KWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGG 191 (390)
Q Consensus 112 ~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~ 191 (390)
+++|++++++ |.+|..|+++.++++||++||....... ...+++++||+.+ ++|+.+ ++
T Consensus 76 ~~~W~~~~~~-------p~~r~~~~~~~~~~~lyv~GG~~~~~~~--------~~~~~~~~~d~~~---~~W~~~---~~ 134 (315)
T 4asc_A 76 DSEWLGMPPL-------PSPRCLFGLGEALNSIYVVGGREIKDGE--------RCLDSVMCYDRLS---FKWGES---DP 134 (315)
T ss_dssp TTEEEECCCB-------SSCEESCEEEEETTEEEEECCEESSTTC--------CBCCCEEEEETTT---TEEEEC---CC
T ss_pred CCeEEECCCC-------CcchhceeEEEECCEEEEEeCCcCCCCC--------cccceEEEECCCC---CcEeEC---CC
Confidence 9999998774 5899999999999999999997632111 6788999999987 689984 56
Q ss_pred CCCCCceeeeEEeeccCCCcEEEEEcCCC-CC-ccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCcc
Q psy1098 192 LPSPRESHTACSWTDEYKNTKLIIYGGMS-GN-RLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWV 269 (390)
Q Consensus 192 ~p~~r~~~~~~~~~~~~~~~~i~v~GG~~-~~-~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~ 269 (390)
+|.+|..|+++.. +++||++||.. +. .++++++||+.+++|++ ...+|.+|..|++++++++|||+||.+
T Consensus 135 ~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~---~~~~p~~r~~~~~~~~~~~iyv~GG~~ 206 (315)
T 4asc_A 135 LPYVVYGHTVLSH-----MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKE---LAPMQTARSLFGATVHDGRIIVAAGVT 206 (315)
T ss_dssp CSSCCBSCEEEEE-----TTEEEEECCBCTTSCBCCCEEEEETTTTEEEE---CCCCSSCCBSCEEEEETTEEEEEEEEC
T ss_pred CCCcccceeEEEE-----CCEEEEEeCCCCCCcccceEEEEeCCCCeEEE---CCCCCCchhceEEEEECCEEEEEeccC
Confidence 8999999999998 99999999983 32 47899999999999999 557899999999999999999999985
Q ss_pred cCCCccccccccccceecCceEEeecCCCeeeecccccccCCCCCCCCCcceeeeCCEEEEEeccCC
Q psy1098 270 PILKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVINSRMYIWSGRDD 336 (390)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~ 336 (390)
... ..+++++||+.+++|+.+++ +|.+|.+|+++.++++|||+||.++
T Consensus 207 ~~~-------------~~~~~~~yd~~~~~W~~~~~------~p~~r~~~~~~~~~~~l~v~GG~~~ 254 (315)
T 4asc_A 207 DTG-------------LTSSAEVYSITDNKWAPFEA------FPQERSSLSLVSLVGTLYAIGGFAT 254 (315)
T ss_dssp SSS-------------EEEEEEEEETTTTEEEEECC------CSSCCBSCEEEEETTEEEEEEEEEE
T ss_pred CCC-------------ccceEEEEECCCCeEEECCC------CCCcccceeEEEECCEEEEECCccc
Confidence 432 26799999999999999987 9999999999999999999999864
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=4.2e-40 Score=301.35 Aligned_cols=272 Identities=21% Similarity=0.369 Sum_probs=220.2
Q ss_pred CCCceeeeEEeCCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCC-----ce
Q psy1098 26 RPRHGHRAVAIKDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEY-----GK 100 (390)
Q Consensus 26 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-----~~ 100 (390)
.+|.++.. .+.||++|| ..+++||+.+++|...+. ..|.+|.+|+++..+++||++||.... ..
T Consensus 7 ~~r~~~~~---~~~i~~~GG------~~~~~yd~~~~~W~~~~~--~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 75 (318)
T 2woz_A 7 IPRHGMFV---KDLILLVND------TAAVAYDPMENECYLTAL--AEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQP 75 (318)
T ss_dssp SCCCCCSE---EEEEEEECS------SEEEEEETTTTEEEEEEE--CTTSCSSEEEEECSSSCEEEEESSCC-------C
T ss_pred ccccccee---cchhhhccc------cceEEECCCCCceecccC--CccCCccceEEEEECCEEEEECCcccCccccCCC
Confidence 45655433 468999999 348999999999998542 345789999999999999999996311 12
Q ss_pred eecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCce
Q psy1098 101 YSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHT 180 (390)
Q Consensus 101 ~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 180 (390)
..+++++||+.+++|++++++ |.+|..|+++.++++||++||...... ...+++++||+.+
T Consensus 76 ~~~~~~~~d~~~~~W~~~~~~-------p~~r~~~~~~~~~~~iyv~GG~~~~~~---------~~~~~~~~yd~~~--- 136 (318)
T 2woz_A 76 LQSYFFQLDNVSSEWVGLPPL-------PSARCLFGLGEVDDKIYVVAGKDLQTE---------ASLDSVLCYDPVA--- 136 (318)
T ss_dssp CCBEEEEEETTTTEEEECSCB-------SSCBCSCEEEEETTEEEEEEEEBTTTC---------CEEEEEEEEETTT---
T ss_pred ccccEEEEeCCCCcEEECCCC-------CccccccceEEECCEEEEEcCccCCCC---------cccceEEEEeCCC---
Confidence 345699999999999998764 588999999999999999999874211 6788999999987
Q ss_pred eeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCC--CccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE
Q psy1098 181 TVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSG--NRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI 258 (390)
Q Consensus 181 ~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~--~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~ 258 (390)
++|+.+ +++|.+|.+|+++.. +++||++||... ..++++++||+.+++|++ ...+|.+|..|+++++
T Consensus 137 ~~W~~~---~~~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~---~~~~p~~r~~~~~~~~ 205 (318)
T 2woz_A 137 AKWSEV---KNLPIKVYGHNVISH-----NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKD---LAPMKTPRSMFGVAIH 205 (318)
T ss_dssp TEEEEE---CCCSSCEESCEEEEE-----TTEEEEECCEESSSCBCCCEEEEETTTTEEEE---ECCCSSCCBSCEEEEE
T ss_pred CCEeEC---CCCCCcccccEEEEE-----CCEEEEEcCCCCCCCccceEEEEcCCCCEEEE---CCCCCCCcccceEEEE
Confidence 699985 468899999999998 999999999743 247899999999999999 4578999999999999
Q ss_pred CCEEEEEcCcccCCCccccccccccceecCceEEeecCCCeeeecccccccCCCCCCCCCcceeeeCCEEEEEeccCCcc
Q psy1098 259 GDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVINSRMYIWSGRDDYK 338 (390)
Q Consensus 259 ~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~ 338 (390)
+++|||+||..... ..+++++||+++++|++++. +|.+|.+|+++.++++|||+||.+...
T Consensus 206 ~~~iyv~GG~~~~~-------------~~~~~~~yd~~~~~W~~~~~------~p~~r~~~~~~~~~~~i~v~GG~~~~~ 266 (318)
T 2woz_A 206 KGKIVIAGGVTEDG-------------LSASVEAFDLKTNKWEVMTE------FPQERSSISLVSLAGSLYAIGGFAMIQ 266 (318)
T ss_dssp TTEEEEEEEEETTE-------------EEEEEEEEETTTCCEEECCC------CSSCCBSCEEEEETTEEEEECCBCCBC
T ss_pred CCEEEEEcCcCCCC-------------ccceEEEEECCCCeEEECCC------CCCcccceEEEEECCEEEEECCeeccC
Confidence 99999999985421 26799999999999999987 999999999999999999999987532
Q ss_pred ccccc--eeeeCeeEEEEecC
Q psy1098 339 KAWNN--QVCCKDLWYLEVEK 357 (390)
Q Consensus 339 ~~~~~--~~~~~d~w~~~~~~ 357 (390)
..-.. ....+|+|.+++..
T Consensus 267 ~~~~~~~~~~~~~v~~yd~~~ 287 (318)
T 2woz_A 267 LESKEFAPTEVNDIWKYEDDK 287 (318)
T ss_dssp ----CCBCCBCCCEEEEETTT
T ss_pred CCCceeccceeeeEEEEeCCC
Confidence 11000 12356777777654
No 14
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=2.1e-38 Score=317.93 Aligned_cols=293 Identities=14% Similarity=0.129 Sum_probs=231.6
Q ss_pred CCCCCCceeeeEEeCCEEEEEccCCCCcccceEEEECCCCcEEeee-e--cCCCCCCCceeeEEEe--CCEEEEEcceeC
Q psy1098 23 PQPRPRHGHRAVAIKDLMLVFGGGNEGIVEELHVFNTATNQWFIPT-L--KGDIPPGCAAYGIVVD--NTRVLIFGGMVE 97 (390)
Q Consensus 23 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~-~--~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 97 (390)
..|.+|.+|+++ ++++|||+||......+++++||+.+++|+.++ . .+.+|.+|.+|+++++ +++||++||...
T Consensus 384 ~~p~rr~g~~~~-~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~ 462 (695)
T 2zwa_A 384 CPINRKFGDVDV-AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKA 462 (695)
T ss_dssp CTTCCBSCEEEE-CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSS
T ss_pred CCCCCceeEEEE-ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCC
Confidence 556677776544 899999999976567789999999999999988 3 2568999999999999 999999999986
Q ss_pred CceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEE-CCEEEEEcCccCCCCCCCCCCCccccccceeeeecC
Q psy1098 98 YGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLI-GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELK 176 (390)
Q Consensus 98 ~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~ 176 (390)
.....+++|+||+.+++|+.++++ |.+|.+|+++.+ +++|||+||.+.. . ++++||+.
T Consensus 463 ~~~~~~dv~~yd~~t~~W~~~~~~-------p~~R~~h~~~~~~~~~iyv~GG~~~~-----------~---~v~~yd~~ 521 (695)
T 2zwa_A 463 PHQGLSDNWIFDMKTREWSMIKSL-------SHTRFRHSACSLPDGNVLILGGVTEG-----------P---AMLLYNVT 521 (695)
T ss_dssp TTCBCCCCEEEETTTTEEEECCCC-------SBCCBSCEEEECTTSCEEEECCBCSS-----------C---SEEEEETT
T ss_pred CCCccccEEEEeCCCCcEEECCCC-------CCCcccceEEEEcCCEEEEECCCCCC-----------C---CEEEEECC
Confidence 666789999999999999999764 589999999997 9999999998754 3 79999998
Q ss_pred CCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCC---CccCcEEEEecCCCe------EeecccCCCCC
Q psy1098 177 SGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSG---NRLSDLFMLDINSMT------WQKPQILGPQP 247 (390)
Q Consensus 177 ~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~---~~~~~v~~~d~~~~~------W~~~~~~~~~p 247 (390)
+ ++|+.+...+.+|.+|.+|+++++.. ..++|||+||... ..++++++||+.+++ |+.+.. .++
T Consensus 522 t---~~W~~~~~~g~~p~~r~~~~a~v~~~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~--~p~ 594 (695)
T 2zwa_A 522 E---EIFKDVTPKDEFFQNSLVSAGLEFDP--VSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ--HPL 594 (695)
T ss_dssp T---TEEEECCCSSGGGGSCCBSCEEEEET--TTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE--CGG
T ss_pred C---CceEEccCCCCCCCcccceeEEEEeC--CCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC--CCC
Confidence 7 79999877667899999999777621 1289999999843 347899999999999 888543 235
Q ss_pred CCCceeeEEEEC-CEEEEEcCcccCCCccccccccccceecCceEEeecCCCeeeeccccccc-CCCCCCCCCcceeeeC
Q psy1098 248 LPRSLHTACVIG-DRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTD-DFLPKPRAGHCASVIN 325 (390)
Q Consensus 248 ~~r~~~~~~~~~-~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~-~~~p~~r~~~~~~~~~ 325 (390)
.+|.+|++++++ ++|||+||.+..... ...+++++||+.+++|+.+..+... +..++.+.+|+++.++
T Consensus 595 ~~R~~~~~~~~~~~~iyv~GG~~~~~~~----------~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~ 664 (695)
T 2zwa_A 595 FQRYGSQIKYITPRKLLIVGGTSPSGLF----------DRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTS 664 (695)
T ss_dssp GCCBSCEEEEEETTEEEEECCBCSSCCC----------CTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC-
T ss_pred CCcccceEEEeCCCEEEEECCccCCCCC----------CCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeEEEeC
Confidence 889999999999 999999998543210 1268999999999999976543211 0012367889999887
Q ss_pred C-EEEEEeccCCccccccceeeeCeeEEEEecC
Q psy1098 326 S-RMYIWSGRDDYKKAWNNQVCCKDLWYLEVEK 357 (390)
Q Consensus 326 ~-~l~v~GG~~~~~~~~~~~~~~~d~w~~~~~~ 357 (390)
+ +|||+||...- .......+++|.+++..
T Consensus 665 ~g~i~v~GGg~~c---fsfGt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 665 MGTIHIIGGGATC---YGFGSVTNVGLKLIAIA 694 (695)
T ss_dssp --CEEEECCEEEC---TTSCEEECCCEEEEECC
T ss_pred CCEEEEEeCCccC---cCccccccceEEEEEEc
Confidence 6 99999996411 11223456999998763
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.6e-37 Score=288.91 Aligned_cols=257 Identities=20% Similarity=0.299 Sum_probs=203.5
Q ss_pred CCCCCCCC--ceeEEecCCCCCCCC-CCCceeeeEEeCCEEEEEccC-C-----CCcccceEEEECCCCcEEeeeecCCC
Q psy1098 3 KLSDDNCP--VYRWRRIDDPAGPQP-RPRHGHRAVAIKDLMLVFGGG-N-----EGIVEELHVFNTATNQWFIPTLKGDI 73 (390)
Q Consensus 3 ~~~~~~~~--~~~W~~~~~~~~~~p-~~r~~~~~~~~~~~iyv~GG~-~-----~~~~~~~~~~d~~~~~W~~~~~~~~~ 73 (390)
+++.||+. +++|+.++ .+| .+|.+|++++++++|||+||. . ....+++++||+.+++|+.++ .+
T Consensus 32 ~~~~~d~~~~~~~W~~~~----~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~---~~ 104 (357)
T 2uvk_A 32 AWYKLDTQAKDKKWTALA----AFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLM---SH 104 (357)
T ss_dssp CEEEEETTSSSCCEEECC----CCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECS---CC
T ss_pred eEEEEccccCCCCeeECC----CCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECC---CC
Confidence 46678886 58999998 788 899999999999999999997 2 135689999999999999998 44
Q ss_pred -CCCCceeeEEEeCCEEEEEcceeCCc---------------------------------eeecceEEEEcCcceeEEec
Q psy1098 74 -PPGCAAYGIVVDNTRVLIFGGMVEYG---------------------------------KYSSDLYELQASKWEWKRLK 119 (390)
Q Consensus 74 -p~~r~~~~~~~~~~~iyv~GG~~~~~---------------------------------~~~~~v~~~d~~~~~W~~~~ 119 (390)
|.+|..|++++.+++||++||..... ...+++++||+.+++|+.+.
T Consensus 105 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 184 (357)
T 2uvk_A 105 APMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAG 184 (357)
T ss_dssp CSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEE
T ss_pred CCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECC
Confidence 48999999999999999999985321 24589999999999999998
Q ss_pred CCCCCCCCCCCC-CccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCCCCce
Q psy1098 120 PKPPRFGSPPCP-RLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRES 198 (390)
Q Consensus 120 ~~~~~~~~~p~~-r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~ 198 (390)
+++ .+ |.+|+++.++++||++||..... ...++++.||+. +..++|+.+... +.|..|..
T Consensus 185 ~~p-------~~~~~~~~~~~~~~~iyv~GG~~~~~----------~~~~~v~~~d~d-~~~~~W~~~~~~-~~~~~~~~ 245 (357)
T 2uvk_A 185 ESP-------WYGTAGAAVVNKGDKTWLINGEAKPG----------LRTDAVFELDFT-GNNLKWNKLAPV-SSPDGVAG 245 (357)
T ss_dssp ECS-------SCCCBSCEEEEETTEEEEECCEEETT----------EECCCEEEEECC----CEEEECCCS-STTTCCBS
T ss_pred CCC-------CCCcccccEEEECCEEEEEeeecCCC----------cccCceEEEEec-CCCCcEEecCCC-CCCccccc
Confidence 753 44 55599999999999999987543 467789889872 112689996542 23444667
Q ss_pred eeeEEeeccCCCcEEEEEcCCCCC------------------ccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECC
Q psy1098 199 HTACSWTDEYKNTKLIIYGGMSGN------------------RLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGD 260 (390)
Q Consensus 199 ~~~~~~~~~~~~~~i~v~GG~~~~------------------~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~ 260 (390)
|+++.. +++|||+||.... .++++++||+.+++|+++ +.+|.+|..|+++.+++
T Consensus 246 ~~~~~~-----~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~ 317 (357)
T 2uvk_A 246 GFAGIS-----NDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKS---GELSQGRAYGVSLPWNN 317 (357)
T ss_dssp CEEEEE-----TTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEE---EECSSCCBSSEEEEETT
T ss_pred ceEEEE-----CCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeC---CCCCCCcccceeEEeCC
Confidence 878888 9999999996321 246799999999999994 57899999999999999
Q ss_pred EEEEEcCcccCCCccccccccccceecCceEEeecCCCeeeeccc
Q psy1098 261 RMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSV 305 (390)
Q Consensus 261 ~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~ 305 (390)
+|||+||.+... ...+++++|++++++|.+..+
T Consensus 318 ~i~v~GG~~~~~------------~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 318 SLLIIGGETAGG------------KAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp EEEEEEEECGGG------------CEEEEEEEEEC-CCSCEEEC-
T ss_pred EEEEEeeeCCCC------------CEeeeEEEEEEcCcEeEeeec
Confidence 999999986432 125899999999999999876
No 16
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=2.2e-33 Score=281.16 Aligned_cols=283 Identities=14% Similarity=0.101 Sum_probs=212.4
Q ss_pred CCCCCCCCceeEEecCCCCCCCCCCCceeeeEEe--CCEEEEEccCCCC-------cccceEEEECCCCcEEeeeecCCC
Q psy1098 3 KLSDDNCPVYRWRRIDDPAGPQPRPRHGHRAVAI--KDLMLVFGGGNEG-------IVEELHVFNTATNQWFIPTLKGDI 73 (390)
Q Consensus 3 ~~~~~~~~~~~W~~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~-------~~~~~~~~d~~~~~W~~~~~~~~~ 73 (390)
.+.+||+.+++|+.+. ++| |..|+++++ +++||++||.... ..+.+++||+.+++|+.+. .+
T Consensus 167 ~~~~~dp~~~~W~~~~----~~P--~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~---~~ 237 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTI----DLP--IVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT---VT 237 (656)
T ss_dssp CCCCCCTTSCEEEEEE----ECS--SCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE---EE
T ss_pred ccccCCCCCCeeeeec----cCC--CCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCc---cc
Confidence 3567999999999987 454 455566666 8999999996432 2357999999999999987 45
Q ss_pred CCCCceee--EE-EeCCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEE-CCEEEEEcC
Q psy1098 74 PPGCAAYG--IV-VDNTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLI-GNKVYLFGG 149 (390)
Q Consensus 74 p~~r~~~~--~~-~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG 149 (390)
|.+|..++ ++ ..+++||++||... .++++||+.+++|+++++| +.+|..|+++.+ +++||++||
T Consensus 238 ~~~~~~~~~~~~~~~~g~lyv~GG~~~-----~~v~~yd~~t~~W~~~~~~-------~~~R~~~s~~~~~dg~iyv~GG 305 (656)
T 1k3i_A 238 VTKHDMFCPGISMDGNGQIVVTGGNDA-----KKTSLYDSSSDSWIPGPDM-------QVARGYQSSATMSDGRVFTIGG 305 (656)
T ss_dssp ECSCCCSSCEEEECTTSCEEEECSSST-----TCEEEEEGGGTEEEECCCC-------SSCCSSCEEEECTTSCEEEECC
T ss_pred CCCCCCccccccCCCCCCEEEeCCCCC-----CceEEecCcCCceeECCCC-------CccccccceEEecCCeEEEEeC
Confidence 65655443 33 46899999999753 2699999999999998765 589999999999 999999999
Q ss_pred ccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCC--CCCCC--------------------------------
Q psy1098 150 LANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYG--GLPSP-------------------------------- 195 (390)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~--~~p~~-------------------------------- 195 (390)
..... ...+++++||+.+ ++|+.++... +++..
T Consensus 306 ~~~~~----------~~~~~~e~yd~~t---~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~ 372 (656)
T 1k3i_A 306 SWSGG----------VFEKNGEVYSPSS---KTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMN 372 (656)
T ss_dssp CCCSS----------SCCCCEEEEETTT---TEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEE
T ss_pred cccCC----------cccccceEeCCCC---CcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCcccee
Confidence 54322 4567888999876 6788753211 11111
Q ss_pred -------------------------CceeeeEEeeccCCCcEEEEEcCCCC---C-ccC---cEEEEecCCCeEeecccC
Q psy1098 196 -------------------------RESHTACSWTDEYKNTKLIIYGGMSG---N-RLS---DLFMLDINSMTWQKPQIL 243 (390)
Q Consensus 196 -------------------------r~~~~~~~~~~~~~~~~i~v~GG~~~---~-~~~---~v~~~d~~~~~W~~~~~~ 243 (390)
+..++++.++ ..+++||++||... . .++ .+++||+.+++|+.+. .
T Consensus 373 ~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~--~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~-~ 449 (656)
T 1k3i_A 373 WYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYD--AVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA-S 449 (656)
T ss_dssp EEECSTTCEEEEEEECEETTEECCCCBTCEEEEEE--TTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC-T
T ss_pred eeecCCcceeecCCccccccccCCCCCCCceEecc--CCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc-c
Confidence 1223333321 12799999999642 2 234 7899999999999854 3
Q ss_pred CCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecCceEEeecCCCeeeecccccccCCCCCCCCCccee
Q psy1098 244 GPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCAS 322 (390)
Q Consensus 244 ~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~ 322 (390)
..+|.+|..|+++++ +++|||+||.......+ ......++++||+++++|+.+.. +|.+|.+|+++
T Consensus 450 ~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~-------~~~~~~~v~~ydp~t~~W~~~~~------~~~~R~~hs~a 516 (656)
T 1k3i_A 450 NGLYFARTFHTSVVLPDGSTFITGGQRRGIPFE-------DSTPVFTPEIYVPEQDTFYKQNP------NSIVRVYHSIS 516 (656)
T ss_dssp TCCSSCCBSCEEEECTTSCEEEECCBSBCCTTC-------CCSBCCCCEEEEGGGTEEEECCC------CSSCCCTTEEE
T ss_pred CCCCCCcccCCeEECCCCCEEEECCcccCcCcC-------CCCcccceEEEcCCCCceeecCC------CCCccccccHh
Confidence 589999999999888 99999999975321100 01236799999999999999987 99999999988
Q ss_pred ee--CCEEEEEeccC
Q psy1098 323 VI--NSRMYIWSGRD 335 (390)
Q Consensus 323 ~~--~~~l~v~GG~~ 335 (390)
.+ +++|||+||..
T Consensus 517 ~ll~dg~v~v~GG~~ 531 (656)
T 1k3i_A 517 LLLPDGRVFNGGGGL 531 (656)
T ss_dssp EECTTSCEEEEECCC
T ss_pred hcCCCcEEEecCCCC
Confidence 88 99999999963
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=6.4e-32 Score=270.94 Aligned_cols=222 Identities=17% Similarity=0.208 Sum_probs=186.9
Q ss_pred CCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcceeEEec-CCCCCCCCCCCCCccceEEEE--CCEEEEEc
Q psy1098 72 DIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLK-PKPPRFGSPPCPRLGHSFTLI--GNKVYLFG 148 (390)
Q Consensus 72 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~-~~~~~~~~~p~~r~~~~~~~~--~~~l~v~G 148 (390)
..|.+|++++++ .+++||++||... ...+++++||+.+++|+.++ +++ .+.+|.+|.+|+++.+ +++|||+|
T Consensus 384 ~~p~rr~g~~~~-~~~~iyv~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p--~~~~p~~R~~hs~~~~~~~~~lyv~G 458 (695)
T 2zwa_A 384 CPINRKFGDVDV-AGNDVFYMGGSNP--YRVNEILQLSIHYDKIDMKNIEVS--SSEVPVARMCHTFTTISRNNQLLLIG 458 (695)
T ss_dssp CTTCCBSCEEEE-CSSCEEEECCBSS--SBCCCEEEEEECSSCEEEEECCCC--CSCCCCCCBSCEEEEETTTTEEEEEC
T ss_pred CCCCCceeEEEE-ECCEEEEECCCCC--CCcCcEEEEECCCCeEEEeccCCC--CCCCCccccceEEEEEccCCEEEEEc
Confidence 566777766554 8899999999865 56789999999999999998 543 2456899999999999 99999999
Q ss_pred CccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEE
Q psy1098 149 GLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLF 228 (390)
Q Consensus 149 G~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~ 228 (390)
|..... ..++++++||+.+ ++|+.+ +++|.+|..|+++.+. +++|||+||.++.. +++
T Consensus 459 G~~~~~----------~~~~dv~~yd~~t---~~W~~~---~~~p~~R~~h~~~~~~----~~~iyv~GG~~~~~--~v~ 516 (695)
T 2zwa_A 459 GRKAPH----------QGLSDNWIFDMKT---REWSMI---KSLSHTRFRHSACSLP----DGNVLILGGVTEGP--AML 516 (695)
T ss_dssp CBSSTT----------CBCCCCEEEETTT---TEEEEC---CCCSBCCBSCEEEECT----TSCEEEECCBCSSC--SEE
T ss_pred CCCCCC----------CccccEEEEeCCC---CcEEEC---CCCCCCcccceEEEEc----CCEEEEECCCCCCC--CEE
Confidence 987653 4788999999987 699994 5689999999999842 89999999987655 899
Q ss_pred EEecCCCeEeecccCCCCCCCCceeeEEEEC---CEEEEEcCcccCCCccccccccccceecCceEEeecCCCe------
Q psy1098 229 MLDINSMTWQKPQILGPQPLPRSLHTACVIG---DRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMT------ 299 (390)
Q Consensus 229 ~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~---~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------ 299 (390)
+||+.+++|+.+...+.+|.+|..|++++++ ++|||+||...... ...+++++||+.+++
T Consensus 517 ~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~-----------~~~~~v~~yd~~~~~w~~~~~ 585 (695)
T 2zwa_A 517 LYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQT-----------TVSDKAIIFKYDAENATEPIT 585 (695)
T ss_dssp EEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSS-----------CBCCEEEEEEECTTCSSCCEE
T ss_pred EEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCC-----------eeeCcEEEEEccCCccccceE
Confidence 9999999999987666789999999988876 89999999853221 136899999999999
Q ss_pred eeecccccccCCC-CCCCCCcceeeeC-CEEEEEeccCCc
Q psy1098 300 WEDLSVEVTDDFL-PKPRAGHCASVIN-SRMYIWSGRDDY 337 (390)
Q Consensus 300 W~~v~~~~~~~~~-p~~r~~~~~~~~~-~~l~v~GG~~~~ 337 (390)
|+.+.. + +.+|.+|+++.++ ++|||+||.+..
T Consensus 586 W~~~~~------~p~~~R~~~~~~~~~~~~iyv~GG~~~~ 619 (695)
T 2zwa_A 586 VIKKLQ------HPLFQRYGSQIKYITPRKLLIVGGTSPS 619 (695)
T ss_dssp EEEEEE------CGGGCCBSCEEEEEETTEEEEECCBCSS
T ss_pred EEEcCC------CCCCCcccceEEEeCCCEEEEECCccCC
Confidence 888876 4 4789999999998 999999998644
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.95 E-value=1.7e-27 Score=238.38 Aligned_cols=237 Identities=16% Similarity=0.155 Sum_probs=181.0
Q ss_pred CCCCCCCCceeEEecCCCCCCCCCCCceee--eE-EeCCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCce
Q psy1098 3 KLSDDNCPVYRWRRIDDPAGPQPRPRHGHR--AV-AIKDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAA 79 (390)
Q Consensus 3 ~~~~~~~~~~~W~~~~~~~~~~p~~r~~~~--~~-~~~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~ 79 (390)
.+..||+.+++|+.+. .+|.+|..|+ ++ ..+++||++||.... ++++||+.+++|+.+. .+|.+|.+
T Consensus 220 ~~~~yd~~t~~w~~~~----~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~---~v~~yd~~t~~W~~~~---~~~~~R~~ 289 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRT----VTVTKHDMFCPGISMDGNGQIVVTGGNDAK---KTSLYDSSSDSWIPGP---DMQVARGY 289 (656)
T ss_dssp EEEEECTTTCCBCCCE----EEECSCCCSSCEEEECTTSCEEEECSSSTT---CEEEEEGGGTEEEECC---CCSSCCSS
T ss_pred EEEEEeCCCCcEEeCc----ccCCCCCCccccccCCCCCCEEEeCCCCCC---ceEEecCcCCceeECC---CCCccccc
Confidence 3567899999999997 6777776554 33 358999999996543 7999999999999987 78999999
Q ss_pred eeEEEe-CCEEEEEcceeCCceeecceEEEEcCcceeEEec-----CCCCCCC--------CC-----------------
Q psy1098 80 YGIVVD-NTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLK-----PKPPRFG--------SP----------------- 128 (390)
Q Consensus 80 ~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~-----~~~~~~~--------~~----------------- 128 (390)
|+++++ +++||++||........+++++||+.+++|+.++ +++.... .+
T Consensus 290 ~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~ 369 (656)
T 1k3i_A 290 QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPST 369 (656)
T ss_dssp CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSS
T ss_pred cceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCcc
Confidence 999998 9999999996544556789999999999999973 3321100 00
Q ss_pred -------------------------CCCCccceEEE---ECCEEEEEcCccCCCCCCCCCCCcccccc---ceeeeecCC
Q psy1098 129 -------------------------PCPRLGHSFTL---IGNKVYLFGGLANSGGDETKPTPSYKYLD---DFYTLELKS 177 (390)
Q Consensus 129 -------------------------p~~r~~~~~~~---~~~~l~v~GG~~~~~~~~~~~~~~~~~~~---~~~~~d~~~ 177 (390)
+.++..++++. .+++||++||....... ..++ ++++||+.+
T Consensus 370 ~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~--------~~~~~~~~v~~yd~~~ 441 (656)
T 1k3i_A 370 AMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDS--------DATTNAHIITLGEPGT 441 (656)
T ss_dssp EEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSS--------BCCCCEEEEECCSTTS
T ss_pred ceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCC--------CcCCcceEEEcCCCCC
Confidence 01122344443 37999999997542110 3344 566677665
Q ss_pred CceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCC-------CccCcEEEEecCCCeEeecccCCCCCCCC
Q psy1098 178 GHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSG-------NRLSDLFMLDINSMTWQKPQILGPQPLPR 250 (390)
Q Consensus 178 ~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~-------~~~~~v~~~d~~~~~W~~~~~~~~~p~~r 250 (390)
++|..+. .+.+|.+|..|+++.++ +++|||+||.+. ...+++++||+.+++|+. .+.++.+|
T Consensus 442 ---~~W~~~~-~~~mp~~R~~~~~~~l~----~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~---~~~~~~~R 510 (656)
T 1k3i_A 442 ---SPNTVFA-SNGLYFARTFHTSVVLP----DGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYK---QNPNSIVR 510 (656)
T ss_dssp ---CCEEEEC-TTCCSSCCBSCEEEECT----TSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEE---CCCCSSCC
T ss_pred ---CCeeEEc-cCCCCCCcccCCeEECC----CCCEEEECCcccCcCcCCCCcccceEEEcCCCCceee---cCCCCCcc
Confidence 7898854 24789999999988774 899999999652 236889999999999999 66889999
Q ss_pred ceeeEEEE--CCEEEEEcCc
Q psy1098 251 SLHTACVI--GDRMFIFGGW 268 (390)
Q Consensus 251 ~~~~~~~~--~~~i~i~GG~ 268 (390)
.+|+++++ +++|||+||.
T Consensus 511 ~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 511 VYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CTTEEEEECTTSCEEEEECC
T ss_pred ccccHhhcCCCcEEEecCCC
Confidence 99998888 9999999995
No 19
>4go6_A HCF N-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=98.24 E-value=8.8e-07 Score=51.68 Aligned_cols=36 Identities=58% Similarity=0.965 Sum_probs=34.2
Q ss_pred EecCCCCCCceeEEecccceEEEeccCccccceeee
Q psy1098 354 EVEKPGPPGRIQLVRAATNNLEICWPGHPIADSYAI 389 (390)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (390)
++++|..++++|++|+-.+.+++||..+++||+|++
T Consensus 3 Et~kP~~PsrVQLvRAst~sLEv~W~~vptA~~YiL 38 (45)
T 4go6_A 3 ETEKPPPPARVQLVRANTNSLEVSWGAVATADSYLL 38 (45)
T ss_dssp CCSCCCCCEEEEEEEECSSCEEEEEECCTTCSEEEE
T ss_pred ccccCCCcceEEEEEeccceEEEEcCCCcchheeEE
Confidence 578999999999999999999999999999999985
No 20
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.84 E-value=0.017 Score=52.71 Aligned_cols=243 Identities=15% Similarity=0.166 Sum_probs=127.3
Q ss_pred CCCCCCCc--eeEEecCCCCCCC---CCCCceeeeEEeCCEEEEEccCCCCcccceEEEECCCCc--EEeeeecCCCCCC
Q psy1098 4 LSDDNCPV--YRWRRIDDPAGPQ---PRPRHGHRAVAIKDLMLVFGGGNEGIVEELHVFNTATNQ--WFIPTLKGDIPPG 76 (390)
Q Consensus 4 ~~~~~~~~--~~W~~~~~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~d~~~~~--W~~~~~~~~~p~~ 76 (390)
|.++|..+ ..|+.-....... .........++.++.+|+... ...++.+|..+++ |+... +..
T Consensus 65 v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-----~g~l~a~d~~tG~~~W~~~~-----~~~ 134 (376)
T 3q7m_A 65 VKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE-----KAQVYALNTSDGTVAWQTKV-----AGE 134 (376)
T ss_dssp EEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET-----TSEEEEEETTTCCEEEEEEC-----SSC
T ss_pred EEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC-----CCEEEEEECCCCCEEEEEeC-----CCc
Confidence 55666653 4787654211000 022333445566888888654 2468999998766 65432 111
Q ss_pred CceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcc--eeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCC
Q psy1098 77 CAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKW--EWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSG 154 (390)
Q Consensus 77 r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~--~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~ 154 (390)
.....+..++.+|+.... ..++.+|..+. .|+.....+ ....+...+.+..++.+|+ |....
T Consensus 135 -~~~~p~~~~~~v~v~~~~-------g~l~~~d~~tG~~~W~~~~~~~-----~~~~~~~~~~~~~~~~v~~-g~~~g-- 198 (376)
T 3q7m_A 135 -ALSRPVVSDGLVLIHTSN-------GQLQALNEADGAVKWTVNLDMP-----SLSLRGESAPTTAFGAAVV-GGDNG-- 198 (376)
T ss_dssp -CCSCCEEETTEEEEECTT-------SEEEEEETTTCCEEEEEECCC----------CCCCCCEEETTEEEE-CCTTT--
T ss_pred -eEcCCEEECCEEEEEcCC-------CeEEEEECCCCcEEEEEeCCCC-----ceeecCCCCcEEECCEEEE-EcCCC--
Confidence 122234557777774421 35889998765 487644311 0111222334445777766 33221
Q ss_pred CCCCCCCCccccccceeeeecCCCceeeeeccccCCCC--CCCC---ceeeeEEeeccCCCcEEEEEcCCCCCccCcEEE
Q psy1098 155 GDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGL--PSPR---ESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFM 229 (390)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~--p~~r---~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~ 229 (390)
.++.+|..+.. ..|+.....+.. ...+ .....+.. ++.+|+.+. + ..++.
T Consensus 199 --------------~l~~~d~~tG~-~~w~~~~~~~~~~~~~~~~~~~~~~p~~~-----~~~v~~~~~-~----g~l~~ 253 (376)
T 3q7m_A 199 --------------RVSAVLMEQGQ-MIWQQRISQATGSTEIDRLSDVDTTPVVV-----NGVVFALAY-N----GNLTA 253 (376)
T ss_dssp --------------EEEEEETTTCC-EEEEEECCC-----------CCCCCCEEE-----TTEEEEECT-T----SCEEE
T ss_pred --------------EEEEEECCCCc-EEEEEecccCCCCcccccccccCCCcEEE-----CCEEEEEec-C----cEEEE
Confidence 37788887643 468763211000 0000 11222333 777887652 1 46889
Q ss_pred EecCCC--eEeecccCCCCCCCCceeeEEEECCEEEEEcCcccCCCccccccccccceecCceEEeecCCCe--eeeccc
Q psy1098 230 LDINSM--TWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMT--WEDLSV 305 (390)
Q Consensus 230 ~d~~~~--~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--W~~v~~ 305 (390)
+|+.+. .|+.. .+ .....+..++.||+... ...+++||+.+.+ |+.-..
T Consensus 254 ~d~~tG~~~w~~~-----~~---~~~~~~~~~~~l~~~~~-------------------~g~l~~~d~~tG~~~w~~~~~ 306 (376)
T 3q7m_A 254 LDLRSGQIMWKRE-----LG---SVNDFIVDGNRIYLVDQ-------------------NDRVMALTIDGGVTLWTQSDL 306 (376)
T ss_dssp EETTTCCEEEEEC-----CC---CEEEEEEETTEEEEEET-------------------TCCEEEEETTTCCEEEEECTT
T ss_pred EECCCCcEEeecc-----CC---CCCCceEECCEEEEEcC-------------------CCeEEEEECCCCcEEEeeccc
Confidence 998766 47762 11 12345556888888753 3578899987765 765321
Q ss_pred ccccCCCCCCCCCcceeeeCCEEEEEe
Q psy1098 306 EVTDDFLPKPRAGHCASVINSRMYIWS 332 (390)
Q Consensus 306 ~~~~~~~p~~r~~~~~~~~~~~l~v~G 332 (390)
..+...+.+..++.||+..
T Consensus 307 --------~~~~~~~~~~~~~~l~v~~ 325 (376)
T 3q7m_A 307 --------LHRLLTSPVLYNGNLVVGD 325 (376)
T ss_dssp --------TTSCCCCCEEETTEEEEEC
T ss_pred --------CCCcccCCEEECCEEEEEe
Confidence 1222334455677777653
No 21
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.80 E-value=0.011 Score=50.41 Aligned_cols=160 Identities=13% Similarity=0.076 Sum_probs=102.0
Q ss_pred eeeEEeCCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEc
Q psy1098 31 HRAVAIKDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQA 110 (390)
Q Consensus 31 ~~~~~~~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 110 (390)
+.+...++.+|+-.|... .+.+..+|+.+++-.... .+|...++.+++..+++||+.... .+.+++||+
T Consensus 24 qGL~~~~~~LyestG~~g--~S~v~~vD~~tgkv~~~~---~l~~~~fgeGi~~~~~~ly~ltw~------~~~v~v~D~ 92 (243)
T 3mbr_X 24 EGLFYLRGHLYESTGETG--RSSVRKVDLETGRILQRA---EVPPPYFGAGIVAWRDRLIQLTWR------NHEGFVYDL 92 (243)
T ss_dssp EEEEEETTEEEEEECCTT--SCEEEEEETTTCCEEEEE---ECCTTCCEEEEEEETTEEEEEESS------SSEEEEEET
T ss_pred ccEEEECCEEEEECCCCC--CceEEEEECCCCCEEEEE---eCCCCcceeEEEEeCCEEEEEEee------CCEEEEEEC
Confidence 356667888999888443 367899999998865544 456666778888899999998543 256999999
Q ss_pred CcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCC
Q psy1098 111 SKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYG 190 (390)
Q Consensus 111 ~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~ 190 (390)
.+.+-..--+ .+..+.+++..++.+|+.-| + +.++.+|+.+.. .-..+.. .
T Consensus 93 ~tl~~~~ti~---------~~~~Gwglt~dg~~L~vSdg-s----------------~~l~~iDp~t~~--~~~~I~V-~ 143 (243)
T 3mbr_X 93 ATLTPRARFR---------YPGEGWALTSDDSHLYMSDG-T----------------AVIRKLDPDTLQ--QVGSIKV-T 143 (243)
T ss_dssp TTTEEEEEEE---------CSSCCCEEEECSSCEEEECS-S----------------SEEEEECTTTCC--EEEEEEC-E
T ss_pred CcCcEEEEEe---------CCCCceEEeeCCCEEEEECC-C----------------CeEEEEeCCCCe--EEEEEEE-c
Confidence 8865433222 22356677777788888755 2 148888987642 2222221 1
Q ss_pred CCCCCC-ceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEee
Q psy1098 191 GLPSPR-ESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQK 239 (390)
Q Consensus 191 ~~p~~r-~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~ 239 (390)
..+.+. .-..+... +++||+---.+ ++|.+.|+.+.+-..
T Consensus 144 ~~g~~~~~lNeLe~~-----~G~lyanvw~s----~~I~vIDp~tG~V~~ 184 (243)
T 3mbr_X 144 AGGRPLDNLNELEWV-----NGELLANVWLT----SRIARIDPASGKVVA 184 (243)
T ss_dssp ETTEECCCEEEEEEE-----TTEEEEEETTT----TEEEEECTTTCBEEE
T ss_pred cCCcccccceeeEEe-----CCEEEEEECCC----CeEEEEECCCCCEEE
Confidence 111111 11223334 78888665332 689999999887443
No 22
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.67 E-value=0.018 Score=49.52 Aligned_cols=207 Identities=10% Similarity=0.015 Sum_probs=119.6
Q ss_pred CCceeEEecCCCCCCCCC-CCc-eeeeEEeCCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeC
Q psy1098 9 CPVYRWRRIDDPAGPQPR-PRH-GHRAVAIKDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDN 86 (390)
Q Consensus 9 ~~~~~W~~~~~~~~~~p~-~r~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~ 86 (390)
+....++.+. ..|- ++. ...+...++.+|+-.|... .+.+..+|+.+++-.... .++...++..++..+
T Consensus 26 ~~~~~~~vv~----~~phd~~~ftqGL~~~~~~LyestG~~g--~S~v~~vD~~Tgkv~~~~---~l~~~~FgeGit~~g 96 (262)
T 3nol_A 26 IPIYDYQIVH----SYPHDTKAFTEGFFYRNGYFYESTGLNG--RSSIRKVDIESGKTLQQI---ELGKRYFGEGISDWK 96 (262)
T ss_dssp CCEEEEEEEE----EEECCTTCEEEEEEEETTEEEEEEEETT--EEEEEEECTTTCCEEEEE---ECCTTCCEEEEEEET
T ss_pred CcccceEEEE----EecCCCCcccceEEEECCEEEEECCCCC--CceEEEEECCCCcEEEEE---ecCCccceeEEEEeC
Confidence 4455677665 3333 333 2334455888999888433 367889999998865443 345555667788889
Q ss_pred CEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCcccc
Q psy1098 87 TRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKY 166 (390)
Q Consensus 87 ~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 166 (390)
++||+.... .+.+++||+.+.+-..--+ .+-.+.+++..++.+|+.-| .
T Consensus 97 ~~ly~ltw~------~~~v~v~D~~t~~~~~ti~---------~~~eG~glt~dg~~L~~SdG-s--------------- 145 (262)
T 3nol_A 97 DKIVGLTWK------NGLGFVWNIRNLRQVRSFN---------YDGEGWGLTHNDQYLIMSDG-T--------------- 145 (262)
T ss_dssp TEEEEEESS------SSEEEEEETTTCCEEEEEE---------CSSCCCCEEECSSCEEECCS-S---------------
T ss_pred CEEEEEEee------CCEEEEEECccCcEEEEEE---------CCCCceEEecCCCEEEEECC-C---------------
Confidence 999998543 2569999998875432222 22355666766778888655 2
Q ss_pred ccceeeeecCCCceeeeeccccCC-CCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCC
Q psy1098 167 LDDFYTLELKSGHTTVWDMPGTYG-GLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGP 245 (390)
Q Consensus 167 ~~~~~~~d~~~~~~~~W~~~~~~~-~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~ 245 (390)
+.++.+|+.+.. .-..+.... ..|..... .+... +++||+---. .++|.+.|+++.+-...-....
T Consensus 146 -~~i~~iDp~T~~--v~~~I~V~~~g~~~~~lN-ELe~~-----~G~lyan~w~----~~~I~vIDp~tG~V~~~Id~~~ 212 (262)
T 3nol_A 146 -PVLRFLDPESLT--PVRTITVTAHGEELPELN-ELEWV-----DGEIFANVWQ----TNKIVRIDPETGKVTGIIDLNG 212 (262)
T ss_dssp -SEEEEECTTTCS--EEEEEECEETTEECCCEE-EEEEE-----TTEEEEEETT----SSEEEEECTTTCBEEEEEECTT
T ss_pred -CeEEEEcCCCCe--EEEEEEeccCCccccccc-eeEEE-----CCEEEEEEcc----CCeEEEEECCCCcEEEEEECCc
Confidence 248888887642 222222110 11111111 23334 6788865432 2689999999887544221211
Q ss_pred C--------CCCCceeeEEEE--CCEEEEEcCc
Q psy1098 246 Q--------PLPRSLHTACVI--GDRMFIFGGW 268 (390)
Q Consensus 246 ~--------p~~r~~~~~~~~--~~~i~i~GG~ 268 (390)
+ +..-.-.+.+.. .+++||-|-.
T Consensus 213 L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 213 ILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp GGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred CccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 1 111122444444 4678888753
No 23
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.66 E-value=0.029 Score=50.24 Aligned_cols=253 Identities=11% Similarity=0.030 Sum_probs=132.9
Q ss_pred CCCCCCCceeEEecCCC-CCCCCCCCceeeeEEeCCEEEEEccCCCCcccceEEEECCCCcEE-eeeecCCCCCCCceee
Q psy1098 4 LSDDNCPVYRWRRIDDP-AGPQPRPRHGHRAVAIKDLMLVFGGGNEGIVEELHVFNTATNQWF-IPTLKGDIPPGCAAYG 81 (390)
Q Consensus 4 ~~~~~~~~~~W~~~~~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~d~~~~~W~-~~~~~~~~p~~r~~~~ 81 (390)
|..+|+.++++..-... ....+.....+.++..++++|+.... .+.+.++|+.+.+-. .++ ... .-+.
T Consensus 19 l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~----~~~v~viD~~t~~~~~~i~---~~~---~p~~ 88 (328)
T 3dsm_A 19 LSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN----SHVIFAIDINTFKEVGRIT---GFT---SPRY 88 (328)
T ss_dssp EEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG----GTEEEEEETTTCCEEEEEE---CCS---SEEE
T ss_pred EEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC----CCEEEEEECcccEEEEEcC---CCC---CCcE
Confidence 34456666666532100 00112234445666789999998762 356899999887763 332 122 2233
Q ss_pred EEE-eCCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCC
Q psy1098 82 IVV-DNTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKP 160 (390)
Q Consensus 82 ~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~ 160 (390)
++. .++++|+.... ...+.++|+.+.+-...-+.....+. ...-..++..++++|+..-
T Consensus 89 i~~~~~g~lyv~~~~------~~~v~~iD~~t~~~~~~i~~g~~~~~---~~~p~~i~~~~~~lyv~~~----------- 148 (328)
T 3dsm_A 89 IHFLSDEKAYVTQIW------DYRIFIINPKTYEITGYIECPDMDME---SGSTEQMVQYGKYVYVNCW----------- 148 (328)
T ss_dssp EEEEETTEEEEEEBS------CSEEEEEETTTTEEEEEEECTTCCTT---TCBCCCEEEETTEEEEEEC-----------
T ss_pred EEEeCCCeEEEEECC------CCeEEEEECCCCeEEEEEEcCCcccc---CCCcceEEEECCEEEEEcC-----------
Confidence 333 67799987632 25688999998865432221100000 0022234447889998742
Q ss_pred CCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCC--CCc----cCcEEEEecCC
Q psy1098 161 TPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMS--GNR----LSDLFMLDINS 234 (390)
Q Consensus 161 ~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~--~~~----~~~v~~~d~~~ 234 (390)
...+.+.++|+.+.. .-..+. .+..| +.+...+ ++++|+..... ... ...++++|+.+
T Consensus 149 ----~~~~~v~viD~~t~~--~~~~i~-~g~~p-----~~i~~~~----dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t 212 (328)
T 3dsm_A 149 ----SYQNRILKIDTETDK--VVDELT-IGIQP-----TSLVMDK----YNKMWTITDGGYEGSPYGYEAPSLYRIDAET 212 (328)
T ss_dssp ----TTCCEEEEEETTTTE--EEEEEE-CSSCB-----CCCEECT----TSEEEEEBCCBCTTCSSCBCCCEEEEEETTT
T ss_pred ----CCCCEEEEEECCCCe--EEEEEE-cCCCc-----cceEEcC----CCCEEEEECCCccCCccccCCceEEEEECCC
Confidence 012248889987642 111221 22222 2333332 67888876321 111 25799999998
Q ss_pred CeEeecccCCCCCCCCceeeEEEE--CCEEEEEcCcccCCCccccccccccceecCceEEeecCCCeeeecccccccCCC
Q psy1098 235 MTWQKPQILGPQPLPRSLHTACVI--GDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFL 312 (390)
Q Consensus 235 ~~W~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~ 312 (390)
.+..... ..+....-..++.. ++.+|+..+ .++++|+.+.+...... .
T Consensus 213 ~~v~~~~---~~~~g~~p~~la~~~d~~~lyv~~~---------------------~v~~~d~~t~~~~~~~~------~ 262 (328)
T 3dsm_A 213 FTVEKQF---KFKLGDWPSEVQLNGTRDTLYWINN---------------------DIWRMPVEADRVPVRPF------L 262 (328)
T ss_dssp TEEEEEE---ECCTTCCCEEEEECTTSCEEEEESS---------------------SEEEEETTCSSCCSSCS------B
T ss_pred CeEEEEE---ecCCCCCceeEEEecCCCEEEEEcc---------------------EEEEEECCCCceeeeee------e
Confidence 8765421 12211222334444 456777532 67889998877532221 2
Q ss_pred CC-CCCCcceee--eCCEEEEEe
Q psy1098 313 PK-PRAGHCASV--INSRMYIWS 332 (390)
Q Consensus 313 p~-~r~~~~~~~--~~~~l~v~G 332 (390)
+. ...-.++++ .+++||+..
T Consensus 263 ~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 263 EFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEE
T ss_pred cCCCCceEEEEEcCCCCeEEEEc
Confidence 21 122223333 267899987
No 24
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.66 E-value=0.0077 Score=51.33 Aligned_cols=160 Identities=11% Similarity=0.046 Sum_probs=100.4
Q ss_pred ceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCC
Q psy1098 78 AAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDE 157 (390)
Q Consensus 78 ~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~ 157 (390)
+-..+...++.||.-.|.... +.+..+|+.+.+-....++ +..-.+..++..+++||+......
T Consensus 22 ftqGL~~~~~~LyestG~~g~----S~v~~vD~~tgkv~~~~~l-------~~~~fgeGi~~~~~~ly~ltw~~~----- 85 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETGR----SSVRKVDLETGRILQRAEV-------PPPYFGAGIVAWRDRLIQLTWRNH----- 85 (243)
T ss_dssp CEEEEEEETTEEEEEECCTTS----CEEEEEETTTCCEEEEEEC-------CTTCCEEEEEEETTEEEEEESSSS-----
T ss_pred ccccEEEECCEEEEECCCCCC----ceEEEEECCCCCEEEEEeC-------CCCcceeEEEEeCCEEEEEEeeCC-----
Confidence 445677788999998887432 4588999999876554443 244456667778999999855433
Q ss_pred CCCCCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeE
Q psy1098 158 TKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTW 237 (390)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W 237 (390)
.+++||..+.. .-..++. +..+-+++.. ++++|+.-|. +.++.+|+++.+-
T Consensus 86 -----------~v~v~D~~tl~--~~~ti~~------~~~Gwglt~d-----g~~L~vSdgs-----~~l~~iDp~t~~~ 136 (243)
T 3mbr_X 86 -----------EGFVYDLATLT--PRARFRY------PGEGWALTSD-----DSHLYMSDGT-----AVIRKLDPDTLQQ 136 (243)
T ss_dssp -----------EEEEEETTTTE--EEEEEEC------SSCCCEEEEC-----SSCEEEECSS-----SEEEEECTTTCCE
T ss_pred -----------EEEEEECCcCc--EEEEEeC------CCCceEEeeC-----CCEEEEECCC-----CeEEEEeCCCCeE
Confidence 48999987642 2223221 2233444443 6788988763 6799999998764
Q ss_pred eecccCCCCCCCC-ceeeEEEECCEEEEEcCcccCCCccccccccccceecCceEEeecCCCee
Q psy1098 238 QKPQILGPQPLPR-SLHTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTW 300 (390)
Q Consensus 238 ~~~~~~~~~p~~r-~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W 300 (390)
..-...+..+.+. .---+...+++||+---. .+.+.+.|+++.+-
T Consensus 137 ~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~------------------s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 137 VGSIKVTAGGRPLDNLNELEWVNGELLANVWL------------------TSRIARIDPASGKV 182 (243)
T ss_dssp EEEEECEETTEECCCEEEEEEETTEEEEEETT------------------TTEEEEECTTTCBE
T ss_pred EEEEEEccCCcccccceeeEEeCCEEEEEECC------------------CCeEEEEECCCCCE
Confidence 4321122222221 112344458888855322 57899999998864
No 25
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.37 E-value=0.025 Score=52.76 Aligned_cols=220 Identities=11% Similarity=0.038 Sum_probs=112.5
Q ss_pred eEEeCCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCc
Q psy1098 33 AVAIKDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASK 112 (390)
Q Consensus 33 ~~~~~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~ 112 (390)
+...++..++.|+.+ ..+.+||..+.+-.... ........++..++.+++.|+.+ ..+.++|..+
T Consensus 138 ~~~~d~~~l~~g~~d----g~i~iwd~~~~~~~~~~-----~~h~~~v~~l~~~~~~l~sg~~d------g~i~vwd~~~ 202 (435)
T 1p22_A 138 CLQYDDQKIVSGLRD----NTIKIWDKNTLECKRIL-----TGHTGSVLCLQYDERVIITGSSD------STVRVWDVNT 202 (435)
T ss_dssp EEECCSSEEEEEESS----SCEEEEESSSCCEEEEE-----CCCSSCEEEEECCSSEEEEEETT------SCEEEEESSS
T ss_pred EEEECCCEEEEEeCC----CeEEEEeCCCCeEEEEE-----cCCCCcEEEEEECCCEEEEEcCC------CeEEEEECCC
Confidence 344567777777744 35888998776644322 11111223333466777777753 3477888877
Q ss_pred ceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCC
Q psy1098 113 WEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGL 192 (390)
Q Consensus 113 ~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~ 192 (390)
.+-...-. .......++.+++..++.|+.+.. +..+|+.+......... ....
T Consensus 203 ~~~~~~~~---------~h~~~v~~l~~~~~~l~s~s~dg~----------------i~vwd~~~~~~~~~~~~--~~~~ 255 (435)
T 1p22_A 203 GEMLNTLI---------HHCEAVLHLRFNNGMMVTCSKDRS----------------IAVWDMASPTDITLRRV--LVGH 255 (435)
T ss_dssp CCEEEEEC---------CCCSCEEEEECCTTEEEEEETTSC----------------EEEEECSSSSCCEEEEE--ECCC
T ss_pred CcEEEEEc---------CCCCcEEEEEEcCCEEEEeeCCCc----------------EEEEeCCCCCCceeeeE--ecCC
Confidence 65432211 111222333445556667765543 66777765321111111 0001
Q ss_pred CCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCcccCC
Q psy1098 193 PSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPIL 272 (390)
Q Consensus 193 p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~ 272 (390)
...-.++.. ++..++.|+.+ ..+.+||+.+.+-.... ........++..++.+++.|+.
T Consensus 256 ---~~~v~~~~~-----~~~~l~s~~~d----g~i~vwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~l~~g~~---- 314 (435)
T 1p22_A 256 ---RAAVNVVDF-----DDKYIVSASGD----RTIKVWNTSTCEFVRTL-----NGHKRGIACLQYRDRLVVSGSS---- 314 (435)
T ss_dssp ---SSCEEEEEE-----ETTEEEEEETT----SEEEEEETTTCCEEEEE-----ECCSSCEEEEEEETTEEEEEET----
T ss_pred ---CCcEEEEEe-----CCCEEEEEeCC----CeEEEEECCcCcEEEEE-----cCCCCcEEEEEeCCCEEEEEeC----
Confidence 111122233 44566666655 46888998876533311 1111122334446677777775
Q ss_pred CccccccccccceecCceEEeecCCCeeeecccccccCCCCCCCCCcceeeeCCEEEEEeccCCc
Q psy1098 273 KDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVINSRMYIWSGRDDY 337 (390)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~ 337 (390)
-..+.+||+.+.+-.. . +......-.++.++++.++.|+.++.
T Consensus 315 --------------dg~i~iwd~~~~~~~~--~------~~~h~~~v~~~~~~~~~l~sg~~dg~ 357 (435)
T 1p22_A 315 --------------DNTIRLWDIECGACLR--V------LEGHEELVRCIRFDNKRIVSGAYDGK 357 (435)
T ss_dssp --------------TSCEEEEETTTCCEEE--E------ECCCSSCEEEEECCSSEEEEEETTSC
T ss_pred --------------CCeEEEEECCCCCEEE--E------EeCCcCcEEEEEecCCEEEEEeCCCc
Confidence 3578889987754221 1 11111122334447888888888754
No 26
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.32 E-value=0.082 Score=47.23 Aligned_cols=195 Identities=10% Similarity=0.046 Sum_probs=106.9
Q ss_pred ccceEEEECCCCcEEeeeec--CCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcceeE-EecCCCCCCCC
Q psy1098 51 VEELHVFNTATNQWFIPTLK--GDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKWEWK-RLKPKPPRFGS 127 (390)
Q Consensus 51 ~~~~~~~d~~~~~W~~~~~~--~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~-~~~~~~~~~~~ 127 (390)
...+..+|+.+++....... ...+.......++..++++|+.... .+.+.++|+.+.+-. .++.
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~~t~~~~~~i~~------- 82 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDINTFKEVGRITG------- 82 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG------GTEEEEEETTTCCEEEEEEC-------
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC------CCEEEEEECcccEEEEEcCC-------
Confidence 56789999999887542210 0123334445667788999998653 256889999887653 3321
Q ss_pred CCCCCccceEEE-ECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCCC-CceeeeEEee
Q psy1098 128 PPCPRLGHSFTL-IGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSP-RESHTACSWT 205 (390)
Q Consensus 128 ~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~-r~~~~~~~~~ 205 (390)
...-+.++. .++++|+..... +.+.++|+.+... .+ .++ .+..... ..-..++..
T Consensus 83 ---~~~p~~i~~~~~g~lyv~~~~~----------------~~v~~iD~~t~~~-~~-~i~-~g~~~~~~~~p~~i~~~- 139 (328)
T 3dsm_A 83 ---FTSPRYIHFLSDEKAYVTQIWD----------------YRIFIINPKTYEI-TG-YIE-CPDMDMESGSTEQMVQY- 139 (328)
T ss_dssp ---CSSEEEEEEEETTEEEEEEBSC----------------SEEEEEETTTTEE-EE-EEE-CTTCCTTTCBCCCEEEE-
T ss_pred ---CCCCcEEEEeCCCeEEEEECCC----------------CeEEEEECCCCeE-EE-EEE-cCCccccCCCcceEEEE-
Confidence 111223333 577999875322 2488889876421 11 121 1220000 011223333
Q ss_pred ccCCCcEEEEEcC-CCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEE-ECCEEEEEcCcccCCCcccccccccc
Q psy1098 206 DEYKNTKLIIYGG-MSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACV-IGDRMFIFGGWVPILKDESRSLHEKE 283 (390)
Q Consensus 206 ~~~~~~~i~v~GG-~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~i~GG~~~~~~~~~~~~~~~~ 283 (390)
++++|+..- .+ +.|.++|+.+.+.......+..| +.++. -++++|+.......... ..
T Consensus 140 ----~~~lyv~~~~~~----~~v~viD~~t~~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~-----~~-- 199 (328)
T 3dsm_A 140 ----GKYVYVNCWSYQ----NRILKIDTETDKVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSP-----YG-- 199 (328)
T ss_dssp ----TTEEEEEECTTC----CEEEEEETTTTEEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCS-----SC--
T ss_pred ----CCEEEEEcCCCC----CEEEEEECCCCeEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCc-----cc--
Confidence 889999852 22 57999999998765532222222 22222 35888887532110000 00
Q ss_pred ceecCceEEeecCCCeeee
Q psy1098 284 WKCSNQLACLHLPEMTWED 302 (390)
Q Consensus 284 ~~~~~~~~~~d~~~~~W~~ 302 (390)
.-...++++|+++.+...
T Consensus 200 -~~~~~v~~id~~t~~v~~ 217 (328)
T 3dsm_A 200 -YEAPSLYRIDAETFTVEK 217 (328)
T ss_dssp -BCCCEEEEEETTTTEEEE
T ss_pred -cCCceEEEEECCCCeEEE
Confidence 003679999999887653
No 27
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.26 E-value=0.011 Score=50.78 Aligned_cols=159 Identities=11% Similarity=-0.027 Sum_probs=95.7
Q ss_pred eeEEEeCCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCC
Q psy1098 80 YGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETK 159 (390)
Q Consensus 80 ~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~ 159 (390)
..+...++.||+..|.... +.+.++|+.+.+-....++ +..-.+..++..+++||+......
T Consensus 46 qGL~~~~~~LyestG~~g~----S~v~~vD~~Tgkv~~~~~l-------~~~~FgeGit~~g~~ly~ltw~~~------- 107 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNGR----SSIRKVDIESGKTLQQIEL-------GKRYFGEGISDWKDKIVGLTWKNG------- 107 (262)
T ss_dssp EEEEEETTEEEEEEEETTE----EEEEEECTTTCCEEEEEEC-------CTTCCEEEEEEETTEEEEEESSSS-------
T ss_pred ceEEEECCEEEEECCCCCC----ceEEEEECCCCcEEEEEec-------CCccceeEEEEeCCEEEEEEeeCC-------
Confidence 4555568899998887422 4588999998876544432 233345557778999999855433
Q ss_pred CCCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEee
Q psy1098 160 PTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQK 239 (390)
Q Consensus 160 ~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~ 239 (390)
.++.||..+.. .-..++. +..+.+.+.. ++.+|+.-|. +.++.+|+++.+-..
T Consensus 108 ---------~v~v~D~~t~~--~~~ti~~------~~eG~glt~d-----g~~L~~SdGs-----~~i~~iDp~T~~v~~ 160 (262)
T 3nol_A 108 ---------LGFVWNIRNLR--QVRSFNY------DGEGWGLTHN-----DQYLIMSDGT-----PVLRFLDPESLTPVR 160 (262)
T ss_dssp ---------EEEEEETTTCC--EEEEEEC------SSCCCCEEEC-----SSCEEECCSS-----SEEEEECTTTCSEEE
T ss_pred ---------EEEEEECccCc--EEEEEEC------CCCceEEecC-----CCEEEEECCC-----CeEEEEcCCCCeEEE
Confidence 48999987642 2222221 2233444443 6778887662 679999999876443
Q ss_pred cccCCCCCCCCce-eeEEEECCEEEEEcCcccCCCccccccccccceecCceEEeecCCCeee
Q psy1098 240 PQILGPQPLPRSL-HTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTWE 301 (390)
Q Consensus 240 ~~~~~~~p~~r~~-~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~ 301 (390)
-...+....+... --+...+++||+---. .+.|.+.|+++.+-.
T Consensus 161 ~I~V~~~g~~~~~lNELe~~~G~lyan~w~------------------~~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 161 TITVTAHGEELPELNELEWVDGEIFANVWQ------------------TNKIVRIDPETGKVT 205 (262)
T ss_dssp EEECEETTEECCCEEEEEEETTEEEEEETT------------------SSEEEEECTTTCBEE
T ss_pred EEEeccCCccccccceeEEECCEEEEEEcc------------------CCeEEEEECCCCcEE
Confidence 1111111111111 1233458888864321 578999999988743
No 28
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.23 E-value=0.027 Score=57.04 Aligned_cols=259 Identities=8% Similarity=0.019 Sum_probs=129.3
Q ss_pred CCCCCCCceeEEecCCCCCCCCCCCceeeeEEe-CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeE
Q psy1098 4 LSDDNCPVYRWRRIDDPAGPQPRPRHGHRAVAI-KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGI 82 (390)
Q Consensus 4 ~~~~~~~~~~W~~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~ 82 (390)
|..+|+.+.+++.+.. +..++.. .-.++... ++.|+| |.. ...++.||+.+++++.+... .++. ..-.++
T Consensus 385 l~~~~~~~~~~~~~~~-~~~~~~~-~v~~i~~d~~g~lWi-gt~----~~Gl~~~~~~~~~~~~~~~~-~~~~-~~v~~i 455 (781)
T 3v9f_A 385 INVFENGKRVAIYNKE-NRELLSN-SVLCSLKDSEGNLWF-GTY----LGNISYYNTRLKKFQIIELE-KNEL-LDVRVF 455 (781)
T ss_dssp EEEEETTEEEEECC------CCCS-BEEEEEECTTSCEEE-EET----TEEEEEECSSSCEEEECCST-TTCC-CCEEEE
T ss_pred EEEEECCCCeEEEccC-CCCCCCc-ceEEEEECCCCCEEE-Eec----cCCEEEEcCCCCcEEEeccC-CCCC-CeEEEE
Confidence 4455666666665531 1112211 22233333 455666 321 13589999998888776521 1111 122333
Q ss_pred EEe-CCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEE-CCEEEEEcCccCCCCCCCCC
Q psy1098 83 VVD-NTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLI-GNKVYLFGGLANSGGDETKP 160 (390)
Q Consensus 83 ~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~ 160 (390)
+.. ++.|++. .. .-+++||+.+.+|..+..... ...+. ..-.+++.. ++.|++. ....
T Consensus 456 ~~d~~g~lwig-t~-------~Gl~~~~~~~~~~~~~~~~~~--~~~~~-~~i~~i~~d~~g~lWig-t~~~-------- 515 (781)
T 3v9f_A 456 YEDKNKKIWIG-TH-------AGVFVIDLASKKVIHHYDTSN--SQLLE-NFVRSIAQDSEGRFWIG-TFGG-------- 515 (781)
T ss_dssp EECTTSEEEEE-ET-------TEEEEEESSSSSCCEEECTTT--SSCSC-SCEEEEEECTTCCEEEE-ESSS--------
T ss_pred EECCCCCEEEE-EC-------CceEEEeCCCCeEEecccCcc--ccccc-ceeEEEEEcCCCCEEEE-EcCC--------
Confidence 333 4566663 21 348899999988877654210 01111 111122222 4667763 2211
Q ss_pred CCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcE-EEEecCCCeEee
Q psy1098 161 TPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDL-FMLDINSMTWQK 239 (390)
Q Consensus 161 ~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v-~~~d~~~~~W~~ 239 (390)
-+++|+..+ .++........++.... .+.... .++.|++... ..+ .+||+.+.+++.
T Consensus 516 --------Gl~~~~~~~---~~~~~~~~~~~l~~~~i-~~i~~d----~~g~lWi~T~------~Glv~~~d~~~~~~~~ 573 (781)
T 3v9f_A 516 --------GVGIYTPDM---QLVRKFNQYEGFCSNTI-NQIYRS----SKGQMWLATG------EGLVCFPSARNFDYQV 573 (781)
T ss_dssp --------CEEEECTTC---CEEEEECTTTTCSCSCE-EEEEEC----TTSCEEEEET------TEEEEESCTTTCCCEE
T ss_pred --------CEEEEeCCC---CeEEEccCCCCCCCCee-EEEEEC----CCCCEEEEEC------CCceEEECCCCCcEEE
Confidence 267787765 35554332223332222 122221 2567777543 346 899998888776
Q ss_pred cccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecCceEEeecCCCeeeecccccccCCCCCCCCC
Q psy1098 240 PQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPRAG 318 (390)
Q Consensus 240 ~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~ 318 (390)
......+|.... .+++.- ++.|++.+. ..+.+||+.+.+++..... ..++...+.
T Consensus 574 ~~~~~gl~~~~i-~~i~~d~~g~lW~~t~--------------------~Gl~~~~~~~~~~~~~~~~---dGl~~~~f~ 629 (781)
T 3v9f_A 574 FQRKEGLPNTHI-RAISEDKNGNIWASTN--------------------TGISCYITSKKCFYTYDHS---NNIPQGSFI 629 (781)
T ss_dssp ECGGGTCSCCCC-CEEEECSSSCEEEECS--------------------SCEEEEETTTTEEEEECGG---GTCCSSCEE
T ss_pred ccccCCCCCceE-EEEEECCCCCEEEEcC--------------------CceEEEECCCCceEEeccc---CCccccccc
Confidence 543333443333 233322 577887642 4688999999988776542 125544443
Q ss_pred c-ceeeeCCEEEEEeccCCc
Q psy1098 319 H-CASVINSRMYIWSGRDDY 337 (390)
Q Consensus 319 ~-~~~~~~~~l~v~GG~~~~ 337 (390)
. +++...+.-+.+||.++.
T Consensus 630 ~~~~~~~~~G~l~~g~~~Gl 649 (781)
T 3v9f_A 630 SGCVTKDHNGLIYFGSINGL 649 (781)
T ss_dssp EEEEEECTTSCEEEEETTEE
T ss_pred cCceEECCCCEEEEECCCce
Confidence 2 333333334455666543
No 29
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.21 E-value=0.12 Score=46.94 Aligned_cols=217 Identities=16% Similarity=0.215 Sum_probs=116.2
Q ss_pred eeEEeCCEEEEEccCCCCcccceEEEECCCCc--EEeeeecCCCC-----CCCceeeEEEeCCEEEEEcceeCCceeecc
Q psy1098 32 RAVAIKDLMLVFGGGNEGIVEELHVFNTATNQ--WFIPTLKGDIP-----PGCAAYGIVVDNTRVLIFGGMVEYGKYSSD 104 (390)
Q Consensus 32 ~~~~~~~~iyv~GG~~~~~~~~~~~~d~~~~~--W~~~~~~~~~p-----~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 104 (390)
+.++.++.+|+... ...++.||..+++ |+..... ..+ ........+..++.||+.... ..
T Consensus 48 ~p~v~~~~v~~~~~-----~g~v~a~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-------g~ 114 (376)
T 3q7m_A 48 HPALADNVVYAADR-----AGLVKALNADDGKEIWSVSLAE-KDGWFSKEPALLSGGVTVSGGHVYIGSEK-------AQ 114 (376)
T ss_dssp CCEEETTEEEEECT-----TSEEEEEETTTCCEEEEEECCC----CCSCCCCCEEEEEEEETTEEEEEETT-------SE
T ss_pred ccEEECCEEEEEcC-----CCeEEEEEccCCceeeeecCcc-ccccccccCcccccCceEeCCEEEEEcCC-------CE
Confidence 55677889998765 2368999997665 6543211 000 122334455678888885321 35
Q ss_pred eEEEEcCcc--eeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceee
Q psy1098 105 LYELQASKW--EWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTV 182 (390)
Q Consensus 105 v~~~d~~~~--~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 182 (390)
++.+|..+. .|+.-... ....+.+..++.+|+... . ..++.+|..+.. ..
T Consensus 115 l~a~d~~tG~~~W~~~~~~----------~~~~~p~~~~~~v~v~~~-~----------------g~l~~~d~~tG~-~~ 166 (376)
T 3q7m_A 115 VYALNTSDGTVAWQTKVAG----------EALSRPVVSDGLVLIHTS-N----------------GQLQALNEADGA-VK 166 (376)
T ss_dssp EEEEETTTCCEEEEEECSS----------CCCSCCEEETTEEEEECT-T----------------SEEEEEETTTCC-EE
T ss_pred EEEEECCCCCEEEEEeCCC----------ceEcCCEEECCEEEEEcC-C----------------CeEEEEECCCCc-EE
Confidence 899998755 57653321 112233455777777432 1 137888887653 46
Q ss_pred eeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCC--eEeecccCCCCCCC-----C---ce
Q psy1098 183 WDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSM--TWQKPQILGPQPLP-----R---SL 252 (390)
Q Consensus 183 W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~--~W~~~~~~~~~p~~-----r---~~ 252 (390)
|+........ ..+...+.+.. ++.+|+ |..+ ..++.+|+.+. .|+... ..+.. + ..
T Consensus 167 W~~~~~~~~~-~~~~~~~~~~~-----~~~v~~-g~~~----g~l~~~d~~tG~~~w~~~~---~~~~~~~~~~~~~~~~ 232 (376)
T 3q7m_A 167 WTVNLDMPSL-SLRGESAPTTA-----FGAAVV-GGDN----GRVSAVLMEQGQMIWQQRI---SQATGSTEIDRLSDVD 232 (376)
T ss_dssp EEEECCC------CCCCCCEEE-----TTEEEE-CCTT----TEEEEEETTTCCEEEEEEC---CC-----------CCC
T ss_pred EEEeCCCCce-eecCCCCcEEE-----CCEEEE-EcCC----CEEEEEECCCCcEEEEEec---ccCCCCcccccccccC
Confidence 8763211111 11111223333 666665 3322 46889998765 477621 11111 1 12
Q ss_pred eeEEEECCEEEEEcCcccCCCccccccccccceecCceEEeecCCC--eeeecccccccCCCCCCCCCcceeeeCCEEEE
Q psy1098 253 HTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEM--TWEDLSVEVTDDFLPKPRAGHCASVINSRMYI 330 (390)
Q Consensus 253 ~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~W~~v~~~~~~~~~p~~r~~~~~~~~~~~l~v 330 (390)
...++.++.+|+.+. ...++++|+++. .|+.-.. . ....+..++.||+
T Consensus 233 ~~p~~~~~~v~~~~~-------------------~g~l~~~d~~tG~~~w~~~~~--------~---~~~~~~~~~~l~~ 282 (376)
T 3q7m_A 233 TTPVVVNGVVFALAY-------------------NGNLTALDLRSGQIMWKRELG--------S---VNDFIVDGNRIYL 282 (376)
T ss_dssp CCCEEETTEEEEECT-------------------TSCEEEEETTTCCEEEEECCC--------C---EEEEEEETTEEEE
T ss_pred CCcEEECCEEEEEec-------------------CcEEEEEECCCCcEEeeccCC--------C---CCCceEECCEEEE
Confidence 333456788887642 357889998766 4765321 1 1234445777777
Q ss_pred Eec
Q psy1098 331 WSG 333 (390)
Q Consensus 331 ~GG 333 (390)
...
T Consensus 283 ~~~ 285 (376)
T 3q7m_A 283 VDQ 285 (376)
T ss_dssp EET
T ss_pred EcC
Confidence 653
No 30
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.10 E-value=0.049 Score=49.58 Aligned_cols=185 Identities=11% Similarity=0.120 Sum_probs=96.1
Q ss_pred EEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEE--eCCEEEEEcceeCCceeecceEEEEcCcceeE
Q psy1098 39 LMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVV--DNTRVLIFGGMVEYGKYSSDLYELQASKWEWK 116 (390)
Q Consensus 39 ~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~ 116 (390)
.+|+.|+.+ ..+.++|..+++-..... ... .-.+++. .+..||+.|+.. ..+.++|..+.+..
T Consensus 3 ~l~vs~~~d----~~v~v~d~~~~~~~~~~~---~~~--~~~~~~~s~dg~~l~~~~~~d------~~i~v~d~~~~~~~ 67 (391)
T 1l0q_A 3 FAYIANSES----DNISVIDVTSNKVTATIP---VGS--NPMGAVISPDGTKVYVANAHS------NDVSIIDTATNNVI 67 (391)
T ss_dssp EEEEEETTT----TEEEEEETTTTEEEEEEE---CSS--SEEEEEECTTSSEEEEEEGGG------TEEEEEETTTTEEE
T ss_pred EEEEEcCCC----CEEEEEECCCCeEEEEee---cCC--CcceEEECCCCCEEEEECCCC------CeEEEEECCCCeEE
Confidence 466666633 458899998776544321 111 1223333 234677776542 35888998877654
Q ss_pred EecCCCCCCCCCCCCCccceEEEE--C-CEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCC
Q psy1098 117 RLKPKPPRFGSPPCPRLGHSFTLI--G-NKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLP 193 (390)
Q Consensus 117 ~~~~~~~~~~~~p~~r~~~~~~~~--~-~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p 193 (390)
..-.. .. ....+.+ + ..+++.+.... .+..+|+.+.. .-..+. .
T Consensus 68 ~~~~~---------~~-~v~~~~~spdg~~l~~~~~~~~----------------~v~v~d~~~~~--~~~~~~-~---- 114 (391)
T 1l0q_A 68 ATVPA---------GS-SPQGVAVSPDGKQVYVTNMASS----------------TLSVIDTTSNT--VAGTVK-T---- 114 (391)
T ss_dssp EEEEC---------SS-SEEEEEECTTSSEEEEEETTTT----------------EEEEEETTTTE--EEEEEE-C----
T ss_pred EEEEC---------CC-CccceEECCCCCEEEEEECCCC----------------EEEEEECCCCe--EEEEEe-C----
Confidence 43321 11 2222333 3 45666543322 37888887642 111111 1
Q ss_pred CCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-C-CEEEEEcCcccC
Q psy1098 194 SPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-G-DRMFIFGGWVPI 271 (390)
Q Consensus 194 ~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~-~~i~i~GG~~~~ 271 (390)
...-..++..++ +..+|+.++.+ ..+.++|+.+.+.......+. .-..++.. + ..+|+.++.
T Consensus 115 -~~~~~~~~~s~d---g~~l~~~~~~~----~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~dg~~l~~~~~~--- 178 (391)
T 1l0q_A 115 -GKSPLGLALSPD---GKKLYVTNNGD----KTVSVINTVTKAVINTVSVGR-----SPKGIAVTPDGTKVYVANFD--- 178 (391)
T ss_dssp -SSSEEEEEECTT---SSEEEEEETTT----TEEEEEETTTTEEEEEEECCS-----SEEEEEECTTSSEEEEEETT---
T ss_pred -CCCcceEEECCC---CCEEEEEeCCC----CEEEEEECCCCcEEEEEecCC-----CcceEEECCCCCEEEEEeCC---
Confidence 111133333322 44577777554 479999998887655322211 11233333 3 356666553
Q ss_pred CCccccccccccceecCceEEeecCCCeeee
Q psy1098 272 LKDESRSLHEKEWKCSNQLACLHLPEMTWED 302 (390)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 302 (390)
...+.++|+.+.+...
T Consensus 179 ---------------~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 179 ---------------SMSISVIDTVTNSVID 194 (391)
T ss_dssp ---------------TTEEEEEETTTTEEEE
T ss_pred ---------------CCEEEEEECCCCeEEE
Confidence 3578899998876443
No 31
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.04 E-value=0.13 Score=44.23 Aligned_cols=157 Identities=13% Similarity=-0.020 Sum_probs=95.0
Q ss_pred eeeEEeCCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEc
Q psy1098 31 HRAVAIKDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQA 110 (390)
Q Consensus 31 ~~~~~~~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 110 (390)
..+...++.+|+-.|.... +..+|+.+++-.... ++...++..++..+++||+.... .+.+++||+
T Consensus 58 qGL~~~~~~Ly~stG~~g~----v~~iD~~Tgkv~~~~----l~~~~FgeGit~~g~~Ly~ltw~------~~~v~V~D~ 123 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQGT----LRQLSLESAQPVWME----RLGNIFAEGLASDGERLYQLTWT------EGLLFTWSG 123 (268)
T ss_dssp EEEEEETTEEEEEETTTTE----EEECCSSCSSCSEEE----ECTTCCEEEEEECSSCEEEEESS------SCEEEEEET
T ss_pred ceEEEECCEEEEEcCCCCE----EEEEECCCCcEEeEE----CCCCcceeEEEEeCCEEEEEEcc------CCEEEEEEC
Confidence 3444557888888884433 889999888753322 33344556688889999998543 256999999
Q ss_pred CcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCC
Q psy1098 111 SKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYG 190 (390)
Q Consensus 111 ~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~ 190 (390)
.+.+-..--+ .+-.+.+++..++.+|+.-| +. .++.+|+.+.. .-..+.. .
T Consensus 124 ~Tl~~~~ti~---------~~~eGwGLt~Dg~~L~vSdG-s~----------------~l~~iDp~T~~--v~~~I~V-~ 174 (268)
T 3nok_A 124 MPPQRERTTR---------YSGEGWGLCYWNGKLVRSDG-GT----------------MLTFHEPDGFA--LVGAVQV-K 174 (268)
T ss_dssp TTTEEEEEEE---------CSSCCCCEEEETTEEEEECS-SS----------------EEEEECTTTCC--EEEEEEC-E
T ss_pred CcCcEEEEEe---------CCCceeEEecCCCEEEEECC-CC----------------EEEEEcCCCCe--EEEEEEe-C
Confidence 8875433222 12345677777889999865 22 48888887642 2222221 1
Q ss_pred CCCCCCce-eeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEee
Q psy1098 191 GLPSPRES-HTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQK 239 (390)
Q Consensus 191 ~~p~~r~~-~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~ 239 (390)
..+.+... ..+... +++||+---. .++|.+.|+++.+-..
T Consensus 175 ~~g~~v~~lNeLe~~-----dG~lyanvw~----s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 175 LRGQPVELINELECA-----NGVIYANIWH----SSDVLEIDPATGTVVG 215 (268)
T ss_dssp ETTEECCCEEEEEEE-----TTEEEEEETT----CSEEEEECTTTCBEEE
T ss_pred CCCcccccccccEEe-----CCEEEEEECC----CCeEEEEeCCCCcEEE
Confidence 11111111 122333 6788865422 2689999999887443
No 32
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.03 E-value=0.14 Score=44.36 Aligned_cols=206 Identities=11% Similarity=0.005 Sum_probs=114.0
Q ss_pred CceeEEecCCCCCCCCCCC-c-eeeeEEeC-CEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeC
Q psy1098 10 PVYRWRRIDDPAGPQPRPR-H-GHRAVAIK-DLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDN 86 (390)
Q Consensus 10 ~~~~W~~~~~~~~~~p~~r-~-~~~~~~~~-~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~ 86 (390)
...+.+.+. ..|-.. . -+.+...+ +.+|+-.|... .+.+..+|+.+++-.... .++...+...++..+
T Consensus 5 ~~~~~~vv~----~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~--~s~v~~iD~~tg~v~~~i---~l~~~~fgeGi~~~g 75 (266)
T 2iwa_A 5 RVYIVEVLN----EFPHDPYAFTQGLVYAENDTLFESTGLYG--RSSVRQVALQTGKVENIH---KMDDSYFGEGLTLLN 75 (266)
T ss_dssp CEEEEEEEE----EEECCTTCCEEEEEECSTTEEEEEECSTT--TCEEEEEETTTCCEEEEE---ECCTTCCEEEEEEET
T ss_pred CccCceEEE----EEECCCCCCcccEEEeCCCeEEEECCCCC--CCEEEEEECCCCCEEEEE---ecCCCcceEEEEEeC
Confidence 344566555 333332 2 24555555 78999877322 367999999988865433 234444556777788
Q ss_pred CEEEEEcceeCCceeecceEEEEcCcceeE-EecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccc
Q psy1098 87 TRVLIFGGMVEYGKYSSDLYELQASKWEWK-RLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYK 165 (390)
Q Consensus 87 ~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~-~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 165 (390)
++||+..-. .+.+++||+.+.+-. .++. + . -.+..++..++++|+.-| +
T Consensus 76 ~~lyv~t~~------~~~v~viD~~t~~v~~~i~~-----g-~---~~g~glt~Dg~~l~vs~g-s-------------- 125 (266)
T 2iwa_A 76 EKLYQVVWL------KNIGFIYDRRTLSNIKNFTH-----Q-M---KDGWGLATDGKILYGSDG-T-------------- 125 (266)
T ss_dssp TEEEEEETT------CSEEEEEETTTTEEEEEEEC-----C-S---SSCCEEEECSSSEEEECS-S--------------
T ss_pred CEEEEEEec------CCEEEEEECCCCcEEEEEEC-----C-C---CCeEEEEECCCEEEEECC-C--------------
Confidence 999998532 256899999876432 2221 1 1 223445555678888654 1
Q ss_pred cccceeeeecCCCceeeeeccccCC-CCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCC
Q psy1098 166 YLDDFYTLELKSGHTTVWDMPGTYG-GLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILG 244 (390)
Q Consensus 166 ~~~~~~~~d~~~~~~~~W~~~~~~~-~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~ 244 (390)
+.++.+|+.+.. .-..+.... ..|..+- ..+... ++++|+.-..+ ++|.+.|+.+.+-...-..+
T Consensus 126 --~~l~viD~~t~~--v~~~I~Vg~~~~p~~~~-nele~~-----dg~lyvn~~~~----~~V~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 126 --SILYEIDPHTFK--LIKKHNVKYNGHRVIRL-NELEYI-----NGEVWANIWQT----DCIARISAKDGTLLGWILLP 191 (266)
T ss_dssp --SEEEEECTTTCC--EEEEEECEETTEECCCE-EEEEEE-----TTEEEEEETTS----SEEEEEETTTCCEEEEEECH
T ss_pred --CeEEEEECCCCc--EEEEEEECCCCcccccc-eeEEEE-----CCEEEEecCCC----CeEEEEECCCCcEEEEEECC
Confidence 248888987632 222222111 1121111 223333 67888765432 68999999988643311111
Q ss_pred C---------CCCCCceeeEEEE--CCEEEEEcCc
Q psy1098 245 P---------QPLPRSLHTACVI--GDRMFIFGGW 268 (390)
Q Consensus 245 ~---------~p~~r~~~~~~~~--~~~i~i~GG~ 268 (390)
. .+..-.-.+.+.. ++++||-|+.
T Consensus 192 g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~ 226 (266)
T 2iwa_A 192 NLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL 226 (266)
T ss_dssp HHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT
T ss_pred CcccccccccccccCceEEEEEcCCCCEEEEECCC
Confidence 0 0111122344444 4689999875
No 33
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.03 E-value=0.036 Score=51.25 Aligned_cols=195 Identities=8% Similarity=-0.005 Sum_probs=94.7
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCce-eeEE-EeCCEEEEEcceeCCceeecceEEEEcCcce
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAA-YGIV-VDNTRVLIFGGMVEYGKYSSDLYELQASKWE 114 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~-~~~~-~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~ 114 (390)
++.+++.++.+ ..+.++|+.+.+.......+........ .+++ ..++++++.|+.. ..+.+||+.+.+
T Consensus 133 ~~~~~~~~~~~----~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d------~~v~~~d~~~~~ 202 (433)
T 3bws_A 133 NTRLAIPLLED----EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA------NAVHVFDLKTLA 202 (433)
T ss_dssp SSEEEEEBTTS----SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG------TEEEEEETTTCC
T ss_pred CCeEEEEeCCC----CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC------CEEEEEECCCce
Confidence 56777777633 3489999988776543211000011111 1222 2356788877643 357888987754
Q ss_pred eEEecCCCCCCCCCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCC
Q psy1098 115 WKRLKPKPPRFGSPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGL 192 (390)
Q Consensus 115 W~~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~ 192 (390)
....-.. ....-.+++.. +..+|+.++.+. .+..+|+.+.. .-..+
T Consensus 203 ~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~~~----------------~i~~~d~~~~~--~~~~~------ 250 (433)
T 3bws_A 203 YKATVDL--------TGKWSKILLYDPIRDLVYCSNWISE----------------DISVIDRKTKL--EIRKT------ 250 (433)
T ss_dssp EEEEEEC--------SSSSEEEEEEETTTTEEEEEETTTT----------------EEEEEETTTTE--EEEEC------
T ss_pred EEEEEcC--------CCCCeeEEEEcCCCCEEEEEecCCC----------------cEEEEECCCCc--EEEEe------
Confidence 3322111 11111222222 346666654432 37888887531 11111
Q ss_pred CCCCceeeeEEeeccCCCcEEEEEcCCCCCc----cCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-C-CEEEEEc
Q psy1098 193 PSPRESHTACSWTDEYKNTKLIIYGGMSGNR----LSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-G-DRMFIFG 266 (390)
Q Consensus 193 p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~----~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~-~~i~i~G 266 (390)
+....-..++..+ +++.+++++..... -..+.+||+.+.+-..... .+. .-..++.. + +.+|+.+
T Consensus 251 ~~~~~~~~~~~~~----~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~---~~~--~~~~~~~~~~g~~l~~~~ 321 (433)
T 3bws_A 251 DKIGLPRGLLLSK----DGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG---PPG--NKRHIVSGNTENKIYVSD 321 (433)
T ss_dssp CCCSEEEEEEECT----TSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE---EEE--CEEEEEECSSTTEEEEEE
T ss_pred cCCCCceEEEEcC----CCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc---CCC--CcceEEECCCCCEEEEEe
Confidence 1111122333332 44444444432211 2468899998776444211 010 11122222 3 3677776
Q ss_pred CcccCCCccccccccccceecCceEEeecCCCee
Q psy1098 267 GWVPILKDESRSLHEKEWKCSNQLACLHLPEMTW 300 (390)
Q Consensus 267 G~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W 300 (390)
+. ...+.+||+.+.+-
T Consensus 322 ~~------------------~~~v~v~d~~~~~~ 337 (433)
T 3bws_A 322 MC------------------CSKIEVYDLKEKKV 337 (433)
T ss_dssp TT------------------TTEEEEEETTTTEE
T ss_pred cC------------------CCEEEEEECCCCcE
Confidence 54 35788999887653
No 34
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.95 E-value=0.14 Score=47.68 Aligned_cols=95 Identities=13% Similarity=0.168 Sum_probs=51.4
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCcccCCCccccccccccceecCc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSNQ 289 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~ 289 (390)
++..++.|+.+ ..+.+||+.+.+-.... .+ ......+...++.+++.|+. -..
T Consensus 288 ~~~~l~~~~~d----~~i~i~d~~~~~~~~~~-~~----~~~~v~~~~~~~~~l~~~~~------------------dg~ 340 (445)
T 2ovr_B 288 DGIHVVSGSLD----TSIRVWDVETGNCIHTL-TG----HQSLTSGMELKDNILVSGNA------------------DST 340 (445)
T ss_dssp CSSEEEEEETT----SCEEEEETTTCCEEEEE-CC----CCSCEEEEEEETTEEEEEET------------------TSC
T ss_pred CCCEEEEEeCC----CeEEEEECCCCCEEEEE-cC----CcccEEEEEEeCCEEEEEeC------------------CCe
Confidence 55567777765 46889998876533211 11 11122333345566677764 357
Q ss_pred eEEeecCCCeeeecccccccCCCCC-CCCCcceeeeCCEEEEEeccCCc
Q psy1098 290 LACLHLPEMTWEDLSVEVTDDFLPK-PRAGHCASVINSRMYIWSGRDDY 337 (390)
Q Consensus 290 ~~~~d~~~~~W~~v~~~~~~~~~p~-~r~~~~~~~~~~~l~v~GG~~~~ 337 (390)
+.+||+.+.+-...-. .+. ....-.++..++.+++.|+.++.
T Consensus 341 i~vwd~~~~~~~~~~~------~~~~~~~~v~~~~~~~~~l~s~~~dg~ 383 (445)
T 2ovr_B 341 VKIWDIKTGQCLQTLQ------GPNKHQSAVTCLQFNKNFVITSSDDGT 383 (445)
T ss_dssp EEEEETTTCCEEEEEC------STTSCSSCEEEEEECSSEEEEEETTSE
T ss_pred EEEEECCCCcEEEEEc------cCCCCCCCEEEEEECCCEEEEEeCCCe
Confidence 8889987654322111 111 12223344557788888887754
No 35
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.87 E-value=0.12 Score=52.34 Aligned_cols=259 Identities=8% Similarity=0.065 Sum_probs=128.1
Q ss_pred CCCCCCCceeEEecCCCCC----CCCCCCceeeeEEe-CCE-EEEEccCCCCcccceEEEECCCCcEEeeeecC-CCCCC
Q psy1098 4 LSDDNCPVYRWRRIDDPAG----PQPRPRHGHRAVAI-KDL-MLVFGGGNEGIVEELHVFNTATNQWFIPTLKG-DIPPG 76 (390)
Q Consensus 4 ~~~~~~~~~~W~~~~~~~~----~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~-~~p~~ 76 (390)
|..+++.+++++.+..... .++ ...-.+++.. ++. |+| |... ..+++||+.++++..+.... .++..
T Consensus 379 l~~~~~~~~~~~~~~~~~~~~~~~l~-~~~v~~i~~d~~g~~lWi-gt~~----~Gl~~~d~~~~~~~~~~~~~~~l~~~ 452 (795)
T 4a2l_A 379 LNLYNPITQRFTSYTLQEDESARGIG-SNNIKAVYVDEKKSLVYI-GTHA----GGLSILHRNSGQVENFNQRNSQLVNE 452 (795)
T ss_dssp EEEECTTTCCEEEECCC------CCS-CSCEEEEEEETTTTEEEE-EETT----TEEEEEETTTCCEEEECTTTSCCSCS
T ss_pred eEEEcCCCCcEEEEecCCCCcccCCC-CccEEEEEEcCCCCEEEE-EeCc----CceeEEeCCCCcEEEeecCCCCcCCC
Confidence 4556777777777642210 011 1222333333 455 555 3221 34889999988887765211 11111
Q ss_pred CceeeEEEe-CCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEE-CCEEEEEcCccCCC
Q psy1098 77 CAAYGIVVD-NTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLI-GNKVYLFGGLANSG 154 (390)
Q Consensus 77 r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~ 154 (390)
.-.+++.. ++.|++. .. .-+++||+.+.+|..+..... ....+... -.++... ++.+++... .
T Consensus 453 -~v~~i~~d~~g~lwig-t~-------~Gl~~~~~~~~~~~~~~~~~~-~~~~~~~~-i~~i~~d~~g~lWigt~-~--- 517 (795)
T 4a2l_A 453 -NVYAILPDGEGNLWLG-TL-------SALVRFNPEQRSFTTIEKEKD-GTPVVSKQ-ITTLFRDSHKRLWIGGE-E--- 517 (795)
T ss_dssp -CEEEEEECSSSCEEEE-ES-------SCEEEEETTTTEEEECCBCTT-CCBCCCCC-EEEEEECTTCCEEEEES-S---
T ss_pred -eeEEEEECCCCCEEEE-ec-------CceeEEeCCCCeEEEcccccc-ccccCCce-EEEEEECCCCCEEEEeC-C---
Confidence 12223333 3566653 22 238899999998887754210 00011111 1122222 467776432 1
Q ss_pred CCCCCCCCccccccceeeeecCCCceeeeecccc---CCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEe
Q psy1098 155 GDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGT---YGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLD 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~---~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d 231 (390)
-+++|+..+ .++ .... ...++.... .+.+.. .++.|++... ..+++||
T Consensus 518 --------------Gl~~~~~~~---~~~-~~~~~~~~~~l~~~~i-~~i~~d----~~g~lWigT~------~Gl~~~d 568 (795)
T 4a2l_A 518 --------------GLSVFKQEG---LDI-QKASILPVSNVTKLFT-NCIYEA----SNGIIWVGTR------EGFYCFN 568 (795)
T ss_dssp --------------CEEEEEEET---TEE-EECCCSCSCGGGGSCE-EEEEEC----TTSCEEEEES------SCEEEEE
T ss_pred --------------ceEEEeCCC---CeE-EEecCCCCCCCCCCee-EEEEEC----CCCCEEEEeC------CCceeEC
Confidence 277777765 234 2111 111111111 112221 2567777542 2589999
Q ss_pred cCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecCceEEeecCCCeeeecccccccC
Q psy1098 232 INSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDD 310 (390)
Q Consensus 232 ~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~ 310 (390)
+.+.+++.......+|.... .+++.- ++.|++.+. ..+.+||+.+.+++..... .
T Consensus 569 ~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lWi~t~--------------------~Gl~~~~~~~~~~~~~~~~---d 624 (795)
T 4a2l_A 569 EKDKQIKRYNTTNGLPNNVV-YGILEDSFGRLWLSTN--------------------RGISCFNPETEKFRNFTES---D 624 (795)
T ss_dssp TTTTEEEEECGGGTCSCSCE-EEEEECTTSCEEEEET--------------------TEEEEEETTTTEEEEECGG---G
T ss_pred CCCCcEEEeCCCCCCchhhe-EEEEECCCCCEEEEcC--------------------CceEEEcCCCCcEEEcCCc---C
Confidence 99998887543333443322 222222 467877653 4678899999988776542 1
Q ss_pred CCCCCCCC-cceeee-CCEEEEEeccCCc
Q psy1098 311 FLPKPRAG-HCASVI-NSRMYIWSGRDDY 337 (390)
Q Consensus 311 ~~p~~r~~-~~~~~~-~~~l~v~GG~~~~ 337 (390)
.++...+. .+++.. ++.|| +||.+|.
T Consensus 625 Gl~~~~f~~~~~~~~~~G~l~-~g~~~Gl 652 (795)
T 4a2l_A 625 GLQSNQFNTASYCRTSVGQMY-FGGINGI 652 (795)
T ss_dssp TCSCSCEEEEEEEECTTSCEE-EEETTEE
T ss_pred CCccccCccCceeECCCCeEE-EecCCce
Confidence 25544443 233333 45554 5665543
No 36
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.85 E-value=0.02 Score=52.26 Aligned_cols=147 Identities=15% Similarity=0.139 Sum_probs=75.8
Q ss_pred CEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEE--eCCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 38 DLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVV--DNTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 38 ~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
+.+|+.++.+ ..+.++|..+++...... .+. .-.+++. .++.||+.|... ..+.+||+.+.+.
T Consensus 44 ~~l~~~~~~d----~~i~v~d~~~~~~~~~~~---~~~--~v~~~~~spdg~~l~~~~~~~------~~v~v~d~~~~~~ 108 (391)
T 1l0q_A 44 TKVYVANAHS----NDVSIIDTATNNVIATVP---AGS--SPQGVAVSPDGKQVYVTNMAS------STLSVIDTTSNTV 108 (391)
T ss_dssp SEEEEEEGGG----TEEEEEETTTTEEEEEEE---CSS--SEEEEEECTTSSEEEEEETTT------TEEEEEETTTTEE
T ss_pred CEEEEECCCC----CeEEEEECCCCeEEEEEE---CCC--CccceEECCCCCEEEEEECCC------CEEEEEECCCCeE
Confidence 3566766532 468899998877654331 111 2223332 244566655331 3488999988765
Q ss_pred EEecCCCCCCCCCCCCCccceEEEE-C-CEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCC
Q psy1098 116 KRLKPKPPRFGSPPCPRLGHSFTLI-G-NKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLP 193 (390)
Q Consensus 116 ~~~~~~~~~~~~~p~~r~~~~~~~~-~-~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p 193 (390)
...... ...-..++.. + ..+|+.++.+. .+..+|+.+.. .-..+. .+
T Consensus 109 ~~~~~~---------~~~~~~~~~s~dg~~l~~~~~~~~----------------~v~~~d~~~~~--~~~~~~-~~--- 157 (391)
T 1l0q_A 109 AGTVKT---------GKSPLGLALSPDGKKLYVTNNGDK----------------TVSVINTVTKA--VINTVS-VG--- 157 (391)
T ss_dssp EEEEEC---------SSSEEEEEECTTSSEEEEEETTTT----------------EEEEEETTTTE--EEEEEE-CC---
T ss_pred EEEEeC---------CCCcceEEECCCCCEEEEEeCCCC----------------EEEEEECCCCc--EEEEEe-cC---
Confidence 443321 1111222222 3 45766654332 37788887632 111111 11
Q ss_pred CCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEee
Q psy1098 194 SPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQK 239 (390)
Q Consensus 194 ~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~ 239 (390)
..-..++..++ +..+++.++.+ ..+.+||+.+.+...
T Consensus 158 --~~~~~~~~~~d---g~~l~~~~~~~----~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 158 --RSPKGIAVTPD---GTKVYVANFDS----MSISVIDTVTNSVID 194 (391)
T ss_dssp --SSEEEEEECTT---SSEEEEEETTT----TEEEEEETTTTEEEE
T ss_pred --CCcceEEECCC---CCEEEEEeCCC----CEEEEEECCCCeEEE
Confidence 11123333322 45677776554 468999998876554
No 37
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.78 E-value=0.26 Score=43.71 Aligned_cols=198 Identities=8% Similarity=0.007 Sum_probs=96.5
Q ss_pred CEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCC-----CCceeeEEE--eCCEEEEEcceeCCceeecceEEEEc
Q psy1098 38 DLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPP-----GCAAYGIVV--DNTRVLIFGGMVEYGKYSSDLYELQA 110 (390)
Q Consensus 38 ~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~-----~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~~d~ 110 (390)
+.+|+.+... ..+..+|+.+.+-......+.... +..-+.++. .++.+|+.+... ...++++|+
T Consensus 101 ~~l~v~~~~~----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~ 171 (353)
T 3vgz_A 101 QTLWFGNTVN----SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDG 171 (353)
T ss_dssp TEEEEEETTT----TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEET
T ss_pred CEEEEEecCC----CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcC
Confidence 4577766532 368899998877533221111111 111233333 345677765221 134889999
Q ss_pred CcceeEEecCCCCCCCCCCCCCccceEEEE-CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccC
Q psy1098 111 SKWEWKRLKPKPPRFGSPPCPRLGHSFTLI-GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTY 189 (390)
Q Consensus 111 ~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~ 189 (390)
.+.+-....+.. ..........- ++.+|+... + +.+..+|..+... .+.. . .
T Consensus 172 ~~~~~~~~~~~~-------~~~~~~~~~s~dg~~l~~~~~-~----------------~~i~~~d~~~~~~-~~~~-~-~ 224 (353)
T 3vgz_A 172 GNIKLKTAIQNT-------GKMSTGLALDSEGKRLYTTNA-D----------------GELITIDTADNKI-LSRK-K-L 224 (353)
T ss_dssp TTTEEEEEECCC-------CTTCCCCEEETTTTEEEEECT-T----------------SEEEEEETTTTEE-EEEE-E-C
T ss_pred CCCceEEEecCC-------CCccceEEECCCCCEEEEEcC-C----------------CeEEEEECCCCeE-EEEE-E-c
Confidence 877544332211 11111122222 456666533 1 1367788876421 1221 1 1
Q ss_pred CCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-C-CEEEEEcC
Q psy1098 190 GGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-G-DRMFIFGG 267 (390)
Q Consensus 190 ~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~-~~i~i~GG 267 (390)
+..........++..++ ++.+|+..... +.+++||+.+.+...... .+.+ ..++.. + +.+|+.+.
T Consensus 225 ~~~~~~~~~~~~~~s~d---g~~l~~~~~~~----~~v~~~d~~~~~~~~~~~---~~~~---~~~~~s~dg~~l~v~~~ 291 (353)
T 3vgz_A 225 LDDGKEHFFINISLDTA---RQRAFITDSKA----AEVLVVDTRNGNILAKVA---APES---LAVLFNPARNEAYVTHR 291 (353)
T ss_dssp CCSSSCCCEEEEEEETT---TTEEEEEESSS----SEEEEEETTTCCEEEEEE---CSSC---CCEEEETTTTEEEEEET
T ss_pred CCCCCCcccceEEECCC---CCEEEEEeCCC----CEEEEEECCCCcEEEEEE---cCCC---ceEEECCCCCEEEEEEC
Confidence 11111112222334332 55677765332 579999998876544221 1222 123333 3 45777654
Q ss_pred cccCCCccccccccccceecCceEEeecCCCeeee
Q psy1098 268 WVPILKDESRSLHEKEWKCSNQLACLHLPEMTWED 302 (390)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 302 (390)
. ...+.++|+.+.+...
T Consensus 292 ~------------------~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 292 Q------------------AGKVSVIDAKSYKVVK 308 (353)
T ss_dssp T------------------TTEEEEEETTTTEEEE
T ss_pred C------------------CCeEEEEECCCCeEEE
Confidence 3 3578899998876543
No 38
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.74 E-value=0.16 Score=43.98 Aligned_cols=159 Identities=13% Similarity=0.061 Sum_probs=92.4
Q ss_pred eeEEEeC-CEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCC
Q psy1098 80 YGIVVDN-TRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDET 158 (390)
Q Consensus 80 ~~~~~~~-~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~ 158 (390)
+.+...+ +.||+..|... .+.+.++|+.+.+-...-+. +.......++..++++|+..-..
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~tg~v~~~i~l-------~~~~fgeGi~~~g~~lyv~t~~~------- 85 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG----RSSVRQVALQTGKVENIHKM-------DDSYFGEGLTLLNEKLYQVVWLK------- 85 (266)
T ss_dssp EEEEECSTTEEEEEECSTT----TCEEEEEETTTCCEEEEEEC-------CTTCCEEEEEEETTEEEEEETTC-------
T ss_pred ccEEEeCCCeEEEECCCCC----CCEEEEEECCCCCEEEEEec-------CCCcceEEEEEeCCEEEEEEecC-------
Confidence 5666555 79999876421 24588999998875544332 12234445666788999985432
Q ss_pred CCCCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEe
Q psy1098 159 KPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQ 238 (390)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~ 238 (390)
+.++.+|..+.. .-..++ .+ .|.+ ...+.- ++++|+.-|. +.++.+|+++.+-.
T Consensus 86 ---------~~v~viD~~t~~--v~~~i~-~g-~~~g---~glt~D-----g~~l~vs~gs-----~~l~viD~~t~~v~ 139 (266)
T 2iwa_A 86 ---------NIGFIYDRRTLS--NIKNFT-HQ-MKDG---WGLATD-----GKILYGSDGT-----SILYEIDPHTFKLI 139 (266)
T ss_dssp ---------SEEEEEETTTTE--EEEEEE-CC-SSSC---CEEEEC-----SSSEEEECSS-----SEEEEECTTTCCEE
T ss_pred ---------CEEEEEECCCCc--EEEEEE-CC-CCCe---EEEEEC-----CCEEEEECCC-----CeEEEEECCCCcEE
Confidence 248889987642 222332 12 2322 223222 6778887652 68999999987644
Q ss_pred ecccCCCCCCCC-ceeeEEEECCEEEEEcCcccCCCccccccccccceecCceEEeecCCCee
Q psy1098 239 KPQILGPQPLPR-SLHTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTW 300 (390)
Q Consensus 239 ~~~~~~~~p~~r-~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W 300 (390)
.--..+..+.+. .-..+...++++|+--.. .+.+.+.|+++.+-
T Consensus 140 ~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~------------------~~~V~vID~~tg~V 184 (266)
T 2iwa_A 140 KKHNVKYNGHRVIRLNELEYINGEVWANIWQ------------------TDCIARISAKDGTL 184 (266)
T ss_dssp EEEECEETTEECCCEEEEEEETTEEEEEETT------------------SSEEEEEETTTCCE
T ss_pred EEEEECCCCcccccceeEEEECCEEEEecCC------------------CCeEEEEECCCCcE
Confidence 321122222221 112333348888866432 57899999988763
No 39
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.72 E-value=0.11 Score=48.38 Aligned_cols=216 Identities=9% Similarity=0.047 Sum_probs=105.4
Q ss_pred EEeCCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcc
Q psy1098 34 VAIKDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKW 113 (390)
Q Consensus 34 ~~~~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~ 113 (390)
...++..++.|+.+ ..+.+||..+.+-.... . .....-.++... +.+++.|+.+ ..+..+|..+.
T Consensus 125 ~~~~g~~l~sg~~d----g~i~vwd~~~~~~~~~~---~-~h~~~v~~~~~~-~~~l~s~~~d------g~i~vwd~~~~ 189 (445)
T 2ovr_B 125 LQFCGNRIVSGSDD----NTLKVWSAVTGKCLRTL---V-GHTGGVWSSQMR-DNIIISGSTD------RTLKVWNAETG 189 (445)
T ss_dssp EEEETTEEEEEETT----SCEEEEETTTCCEEEEC---C-CCSSCEEEEEEE-TTEEEEEETT------SCEEEEETTTT
T ss_pred EEEcCCEEEEEECC----CcEEEEECCCCcEEEEE---c-CCCCCEEEEEec-CCEEEEEeCC------CeEEEEECCcC
Confidence 33455566666633 45888998776643221 0 111111223333 4566666653 34778888776
Q ss_pred eeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCC
Q psy1098 114 EWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLP 193 (390)
Q Consensus 114 ~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p 193 (390)
+-...-. .......+..+++..++.|+.+. .+..+|+.+.. .-..+.. ..
T Consensus 190 ~~~~~~~---------~h~~~v~~~~~~~~~l~s~s~dg----------------~i~~wd~~~~~--~~~~~~~---~~ 239 (445)
T 2ovr_B 190 ECIHTLY---------GHTSTVRCMHLHEKRVVSGSRDA----------------TLRVWDIETGQ--CLHVLMG---HV 239 (445)
T ss_dssp EEEEEEC---------CCSSCEEEEEEETTEEEEEETTS----------------EEEEEESSSCC--EEEEEEC---CS
T ss_pred cEEEEEC---------CCCCcEEEEEecCCEEEEEeCCC----------------EEEEEECCCCc--EEEEEcC---Cc
Confidence 4332211 11112223334455566666543 26777776532 1111110 11
Q ss_pred CCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCcccCCC
Q psy1098 194 SPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPILK 273 (390)
Q Consensus 194 ~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~ 273 (390)
....++.. ++..++.|+.+ ..+.+||+.+.+-.... ........++..++..++.|+.
T Consensus 240 ---~~v~~~~~-----~~~~l~~~~~d----g~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~l~~~~~----- 297 (445)
T 2ovr_B 240 ---AAVRCVQY-----DGRRVVSGAYD----FMVKVWDPETETCLHTL-----QGHTNRVYSLQFDGIHVVSGSL----- 297 (445)
T ss_dssp ---SCEEEEEE-----CSSCEEEEETT----SCEEEEEGGGTEEEEEE-----CCCSSCEEEEEECSSEEEEEET-----
T ss_pred ---ccEEEEEE-----CCCEEEEEcCC----CEEEEEECCCCcEeEEe-----cCCCCceEEEEECCCEEEEEeC-----
Confidence 11222333 55667777765 46888888776533211 1111122333447777777775
Q ss_pred ccccccccccceecCceEEeecCCCeeeecccccccCCCCCCCCCcceeeeCCEEEEEeccCCc
Q psy1098 274 DESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVINSRMYIWSGRDDY 337 (390)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~ 337 (390)
-..+.+||+.+.+-... +........++..++.+++.|+.++.
T Consensus 298 -------------d~~i~i~d~~~~~~~~~--------~~~~~~~v~~~~~~~~~l~~~~~dg~ 340 (445)
T 2ovr_B 298 -------------DTSIRVWDVETGNCIHT--------LTGHQSLTSGMELKDNILVSGNADST 340 (445)
T ss_dssp -------------TSCEEEEETTTCCEEEE--------ECCCCSCEEEEEEETTEEEEEETTSC
T ss_pred -------------CCeEEEEECCCCCEEEE--------EcCCcccEEEEEEeCCEEEEEeCCCe
Confidence 35788899877653221 11111122233445666777776543
No 40
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.63 E-value=0.31 Score=42.61 Aligned_cols=67 Identities=18% Similarity=0.187 Sum_probs=38.0
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCcee-eEEEECCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLH-TACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~-~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
+++.++.|+.+ ..+.+||+.+.+-.... .+......... .....++.+++.|+. -.
T Consensus 203 ~~~~l~~~~~d----~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~sg~~------------------dg 259 (312)
T 4ery_A 203 NGKYILAATLD----NTLKLWDYSKGKCLKTY-TGHKNEKYCIFANFSVTGGKWIVSGSE------------------DN 259 (312)
T ss_dssp TSSEEEEEETT----TEEEEEETTTTEEEEEE-CSSCCSSSCCCEEEECSSSCEEEECCT------------------TS
T ss_pred CCCEEEEEcCC----CeEEEEECCCCcEEEEE-EecCCceEEEEEEEEeCCCcEEEEECC------------------CC
Confidence 56677777765 46888998877543321 11111111111 222235677777775 35
Q ss_pred ceEEeecCCCe
Q psy1098 289 QLACLHLPEMT 299 (390)
Q Consensus 289 ~~~~~d~~~~~ 299 (390)
.+.+||+.+.+
T Consensus 260 ~i~vwd~~~~~ 270 (312)
T 4ery_A 260 LVYIWNLQTKE 270 (312)
T ss_dssp CEEEEETTTCC
T ss_pred EEEEEECCCch
Confidence 78889987765
No 41
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.43 E-value=0.097 Score=48.61 Aligned_cols=187 Identities=9% Similarity=0.100 Sum_probs=92.3
Q ss_pred EEeCCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcc
Q psy1098 34 VAIKDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKW 113 (390)
Q Consensus 34 ~~~~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~ 113 (390)
+..++.+++.|+.+ ..+.++|..+.+..... .........+...+..++.|+.+ ..+..||..+.
T Consensus 179 l~~~~~~l~sg~~d----g~i~vwd~~~~~~~~~~-----~~h~~~v~~l~~~~~~l~s~s~d------g~i~vwd~~~~ 243 (435)
T 1p22_A 179 LQYDERVIITGSSD----STVRVWDVNTGEMLNTL-----IHHCEAVLHLRFNNGMMVTCSKD------RSIAVWDMASP 243 (435)
T ss_dssp EECCSSEEEEEETT----SCEEEEESSSCCEEEEE-----CCCCSCEEEEECCTTEEEEEETT------SCEEEEECSSS
T ss_pred EEECCCEEEEEcCC----CeEEEEECCCCcEEEEE-----cCCCCcEEEEEEcCCEEEEeeCC------CcEEEEeCCCC
Confidence 33466677777643 34888888877643322 11111222233345566666653 34677887665
Q ss_pred eeEEe-cCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCC
Q psy1098 114 EWKRL-KPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGL 192 (390)
Q Consensus 114 ~W~~~-~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~ 192 (390)
.-... ... ........++.+++..++.|+.+. .+..+|+.+.. .-..+. ..
T Consensus 244 ~~~~~~~~~-------~~~~~~v~~~~~~~~~l~s~~~dg----------------~i~vwd~~~~~--~~~~~~---~~ 295 (435)
T 1p22_A 244 TDITLRRVL-------VGHRAAVNVVDFDDKYIVSASGDR----------------TIKVWNTSTCE--FVRTLN---GH 295 (435)
T ss_dssp SCCEEEEEE-------CCCSSCEEEEEEETTEEEEEETTS----------------EEEEEETTTCC--EEEEEE---CC
T ss_pred CCceeeeEe-------cCCCCcEEEEEeCCCEEEEEeCCC----------------eEEEEECCcCc--EEEEEc---CC
Confidence 32111 110 011122233334555666666543 26777776532 111111 11
Q ss_pred CCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCcccCC
Q psy1098 193 PSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPIL 272 (390)
Q Consensus 193 p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~ 272 (390)
. ....++.. ++..++.|+.+ ..+.+||+.+.+-...- .. ....-.++..++..++.|+.
T Consensus 296 ~---~~v~~~~~-----~~~~l~~g~~d----g~i~iwd~~~~~~~~~~--~~---h~~~v~~~~~~~~~l~sg~~---- 354 (435)
T 1p22_A 296 K---RGIACLQY-----RDRLVVSGSSD----NTIRLWDIECGACLRVL--EG---HEELVRCIRFDNKRIVSGAY---- 354 (435)
T ss_dssp S---SCEEEEEE-----ETTEEEEEETT----SCEEEEETTTCCEEEEE--CC---CSSCEEEEECCSSEEEEEET----
T ss_pred C---CcEEEEEe-----CCCEEEEEeCC----CeEEEEECCCCCEEEEE--eC---CcCcEEEEEecCCEEEEEeC----
Confidence 1 11122333 45567777765 46889998876432211 11 11122334447778888875
Q ss_pred CccccccccccceecCceEEeecCCC
Q psy1098 273 KDESRSLHEKEWKCSNQLACLHLPEM 298 (390)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~d~~~~ 298 (390)
-..+.+||+.+.
T Consensus 355 --------------dg~i~vwd~~~~ 366 (435)
T 1p22_A 355 --------------DGKIKVWDLVAA 366 (435)
T ss_dssp --------------TSCEEEEEHHHH
T ss_pred --------------CCcEEEEECCCC
Confidence 346777887543
No 42
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.32 E-value=0.057 Score=46.50 Aligned_cols=156 Identities=13% Similarity=0.087 Sum_probs=94.2
Q ss_pred eeeEEEeCCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCC
Q psy1098 79 AYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDET 158 (390)
Q Consensus 79 ~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~ 158 (390)
...+...++.||+..|... .+.++|+.+.+-.... ++ ..-++..++..+++||+......
T Consensus 57 tqGL~~~~~~Ly~stG~~g------~v~~iD~~Tgkv~~~~-l~-------~~~FgeGit~~g~~Ly~ltw~~~------ 116 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQG------TLRQLSLESAQPVWME-RL-------GNIFAEGLASDGERLYQLTWTEG------ 116 (268)
T ss_dssp EEEEEEETTEEEEEETTTT------EEEECCSSCSSCSEEE-EC-------TTCCEEEEEECSSCEEEEESSSC------
T ss_pred cceEEEECCEEEEEcCCCC------EEEEEECCCCcEEeEE-CC-------CCcceeEEEEeCCEEEEEEccCC------
Confidence 3566667889999888732 2788999888644322 21 22344556777899999855433
Q ss_pred CCCCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEe
Q psy1098 159 KPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQ 238 (390)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~ 238 (390)
.++.||..+.. .-..++. +..+-+.+.. ++++|+.-|. +.++.+|+++.+-.
T Consensus 117 ----------~v~V~D~~Tl~--~~~ti~~------~~eGwGLt~D-----g~~L~vSdGs-----~~l~~iDp~T~~v~ 168 (268)
T 3nok_A 117 ----------LLFTWSGMPPQ--RERTTRY------SGEGWGLCYW-----NGKLVRSDGG-----TMLTFHEPDGFALV 168 (268)
T ss_dssp ----------EEEEEETTTTE--EEEEEEC------SSCCCCEEEE-----TTEEEEECSS-----SEEEEECTTTCCEE
T ss_pred ----------EEEEEECCcCc--EEEEEeC------CCceeEEecC-----CCEEEEECCC-----CEEEEEcCCCCeEE
Confidence 48999988642 2233322 1223344443 7889998763 68999999987644
Q ss_pred ecccCCCCCCCCce-eeEEEECCEEEEEcCcccCCCccccccccccceecCceEEeecCCCee
Q psy1098 239 KPQILGPQPLPRSL-HTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTW 300 (390)
Q Consensus 239 ~~~~~~~~p~~r~~-~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W 300 (390)
.-......+.+... --+...+++||+---. .+.|.+.|+++.+-
T Consensus 169 ~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~------------------s~~I~vIDp~TG~V 213 (268)
T 3nok_A 169 GAVQVKLRGQPVELINELECANGVIYANIWH------------------SSDVLEIDPATGTV 213 (268)
T ss_dssp EEEECEETTEECCCEEEEEEETTEEEEEETT------------------CSEEEEECTTTCBE
T ss_pred EEEEeCCCCcccccccccEEeCCEEEEEECC------------------CCeEEEEeCCCCcE
Confidence 42112222222111 1233448888853211 57899999998863
No 43
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.21 E-value=0.62 Score=41.53 Aligned_cols=71 Identities=6% Similarity=0.079 Sum_probs=38.7
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCc-eeeEEEe-C--CEEEEEcceeCCceeecceEEEEcCc
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCA-AYGIVVD-N--TRVLIFGGMVEYGKYSSDLYELQASK 112 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~-~~~~~~~-~--~~iyv~GG~~~~~~~~~~v~~~d~~~ 112 (390)
++..++.|+.+ ..+.+||.....+..+.. +..... -.++... . +.+++.|+.+ ..+.+||..+
T Consensus 22 ~~~~l~~~~~d----g~i~iw~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~ 88 (379)
T 3jrp_A 22 YGKRLATCSSD----KTIKIFEVEGETHKLIDT---LTGHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEEN 88 (379)
T ss_dssp SSSEEEEEETT----SCEEEEEEETTEEEEEEE---ECCCSSCEEEEEECCGGGCSEEEEEETT------SCEEEEEEET
T ss_pred CCCEEEEEECC----CcEEEEecCCCcceeeeE---ecCCCCcEEEEEeCCCCCCCEEEEeccC------CEEEEEEcCC
Confidence 35566666633 347888887666655542 111111 1222222 2 4666666653 2477788888
Q ss_pred ceeEEecC
Q psy1098 113 WEWKRLKP 120 (390)
Q Consensus 113 ~~W~~~~~ 120 (390)
.+|..+..
T Consensus 89 ~~~~~~~~ 96 (379)
T 3jrp_A 89 GRWSQIAV 96 (379)
T ss_dssp TEEEEEEE
T ss_pred CceeEeee
Confidence 77665543
No 44
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.18 E-value=0.33 Score=48.98 Aligned_cols=211 Identities=9% Similarity=-0.008 Sum_probs=105.9
Q ss_pred CCCCCCCceeEEecCCCCCCCCCCCceeeeEEe-CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCC-CCceee
Q psy1098 4 LSDDNCPVYRWRRIDDPAGPQPRPRHGHRAVAI-KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPP-GCAAYG 81 (390)
Q Consensus 4 ~~~~~~~~~~W~~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~-~r~~~~ 81 (390)
|..+|+.+++++.+... .++. ..-.++... ++.|++... ..+++||+.+++|.........+. ...-.+
T Consensus 429 l~~~~~~~~~~~~~~~~--~~~~-~~v~~i~~d~~g~lwigt~------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 499 (781)
T 3v9f_A 429 ISYYNTRLKKFQIIELE--KNEL-LDVRVFYEDKNKKIWIGTH------AGVFVIDLASKKVIHHYDTSNSQLLENFVRS 499 (781)
T ss_dssp EEEECSSSCEEEECCST--TTCC-CCEEEEEECTTSEEEEEET------TEEEEEESSSSSCCEEECTTTSSCSCSCEEE
T ss_pred EEEEcCCCCcEEEeccC--CCCC-CeEEEEEECCCCCEEEEEC------CceEEEeCCCCeEEecccCcccccccceeEE
Confidence 45567777788877521 1111 122233333 455665322 458999999988877653211011 111222
Q ss_pred EEEe-CCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEE-CCEEEEEcCccCCCCCCCC
Q psy1098 82 IVVD-NTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLI-GNKVYLFGGLANSGGDETK 159 (390)
Q Consensus 82 ~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~ 159 (390)
++.. ++.|++. ... .-+++||+.+.++..+... ..++.... .++... ++.|++... .
T Consensus 500 i~~d~~g~lWig-t~~------~Gl~~~~~~~~~~~~~~~~----~~l~~~~i-~~i~~d~~g~lWi~T~-~-------- 558 (781)
T 3v9f_A 500 IAQDSEGRFWIG-TFG------GGVGIYTPDMQLVRKFNQY----EGFCSNTI-NQIYRSSKGQMWLATG-E-------- 558 (781)
T ss_dssp EEECTTCCEEEE-ESS------SCEEEECTTCCEEEEECTT----TTCSCSCE-EEEEECTTSCEEEEET-T--------
T ss_pred EEEcCCCCEEEE-EcC------CCEEEEeCCCCeEEEccCC----CCCCCCee-EEEEECCCCCEEEEEC-C--------
Confidence 3332 4566653 221 2378899998888877541 11221111 122222 467776422 1
Q ss_pred CCCccccccce-eeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEe
Q psy1098 160 PTPSYKYLDDF-YTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQ 238 (390)
Q Consensus 160 ~~~~~~~~~~~-~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~ 238 (390)
-+ ++||..+. ++........+|.... .+++.. .++.|++.+. +.+.+||+.+.+++
T Consensus 559 ---------Glv~~~d~~~~---~~~~~~~~~gl~~~~i-~~i~~d----~~g~lW~~t~------~Gl~~~~~~~~~~~ 615 (781)
T 3v9f_A 559 ---------GLVCFPSARNF---DYQVFQRKEGLPNTHI-RAISED----KNGNIWASTN------TGISCYITSKKCFY 615 (781)
T ss_dssp ---------EEEEESCTTTC---CCEEECGGGTCSCCCC-CEEEEC----SSSCEEEECS------SCEEEEETTTTEEE
T ss_pred ---------CceEEECCCCC---cEEEccccCCCCCceE-EEEEEC----CCCCEEEEcC------CceEEEECCCCceE
Confidence 14 67776652 3433222223443332 233332 2677887753 46899999999887
Q ss_pred ecccCCCCCCCCcee-eEEEE-CCEEEEEcCc
Q psy1098 239 KPQILGPQPLPRSLH-TACVI-GDRMFIFGGW 268 (390)
Q Consensus 239 ~~~~~~~~p~~r~~~-~~~~~-~~~i~i~GG~ 268 (390)
.......++...... +++.. +++||+ ||.
T Consensus 616 ~~~~~dGl~~~~f~~~~~~~~~~G~l~~-g~~ 646 (781)
T 3v9f_A 616 TYDHSNNIPQGSFISGCVTKDHNGLIYF-GSI 646 (781)
T ss_dssp EECGGGTCCSSCEEEEEEEECTTSCEEE-EET
T ss_pred EecccCCccccccccCceEECCCCEEEE-ECC
Confidence 754433444443332 33333 455555 553
No 45
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.15 E-value=0.22 Score=45.54 Aligned_cols=96 Identities=13% Similarity=0.150 Sum_probs=49.7
Q ss_pred CcEEEEEcC--CCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCE-EEEEcCcccCCCccccccccccce
Q psy1098 210 NTKLIIYGG--MSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDR-MFIFGGWVPILKDESRSLHEKEWK 285 (390)
Q Consensus 210 ~~~i~v~GG--~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~-i~i~GG~~~~~~~~~~~~~~~~~~ 285 (390)
+..+++.|+ .+ ..+.+||+.+.+-..... . ...-.+++.. +++ +++.+|..
T Consensus 271 ~~~ll~~~~gs~d----~~i~i~d~~~~~~~~~~~---~--~~~v~~~~~s~~~~~l~~~~g~~---------------- 325 (401)
T 4aez_A 271 QSNLLATGGGTMD----KQIHFWNAATGARVNTVD---A--GSQVTSLIWSPHSKEIMSTHGFP---------------- 325 (401)
T ss_dssp STTEEEEECCTTT----CEEEEEETTTCCEEEEEE---C--SSCEEEEEECSSSSEEEEEECTT----------------
T ss_pred CCCEEEEecCCCC----CEEEEEECCCCCEEEEEe---C--CCcEEEEEECCCCCeEEEEeecC----------------
Confidence 456777764 33 468899988765433211 1 1111222222 344 44443431
Q ss_pred ecCceEEeecCCCeeeecccccccCCCCC--CCCCcceeeeCCEEEEEeccCCc
Q psy1098 286 CSNQLACLHLPEMTWEDLSVEVTDDFLPK--PRAGHCASVINSRMYIWSGRDDY 337 (390)
Q Consensus 286 ~~~~~~~~d~~~~~W~~v~~~~~~~~~p~--~r~~~~~~~~~~~l~v~GG~~~~ 337 (390)
...+.+||+.+.....+.. ++. .+....+..-++++++.||.++.
T Consensus 326 -dg~i~v~~~~~~~~~~~~~------~~~h~~~v~~~~~s~dg~~l~s~~~dg~ 372 (401)
T 4aez_A 326 -DNNLSIWSYSSSGLTKQVD------IPAHDTRVLYSALSPDGRILSTAASDEN 372 (401)
T ss_dssp -TCEEEEEEEETTEEEEEEE------EECCSSCCCEEEECTTSSEEEEECTTSE
T ss_pred -CCcEEEEecCCccceeEEE------ecCCCCCEEEEEECCCCCEEEEEeCCCc
Confidence 3578889988877665543 221 12212222226778888888754
No 46
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.11 E-value=0.63 Score=40.60 Aligned_cols=222 Identities=9% Similarity=0.025 Sum_probs=104.5
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEE-eCCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVV-DNTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
++..++.|+.+ ..+.++|..+.+...... . ....-.+++. -++++++.|+.+ ..+.+||..+.+-
T Consensus 34 ~~~~l~s~~~d----g~i~iw~~~~~~~~~~~~---~-h~~~v~~~~~~~~~~~l~s~~~d------~~i~vwd~~~~~~ 99 (312)
T 4ery_A 34 NGEWLASSSAD----KLIKIWGAYDGKFEKTIS---G-HKLGISDVAWSSDSNLLVSASDD------KTLKIWDVSSGKC 99 (312)
T ss_dssp TSSEEEEEETT----SCEEEEETTTCCEEEEEC---C-CSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTCCE
T ss_pred CCCEEEEeeCC----CeEEEEeCCCcccchhhc---c-CCCceEEEEEcCCCCEEEEECCC------CEEEEEECCCCcE
Confidence 34566666633 347788887776654331 1 1111122222 245666667653 3477788876643
Q ss_pred EEecCCCCCCCCCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCC
Q psy1098 116 KRLKPKPPRFGSPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLP 193 (390)
Q Consensus 116 ~~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p 193 (390)
...-. .....-.++.+ ++.+++.|+.+.. +..+|+.+.. .-..+. ...
T Consensus 100 ~~~~~---------~~~~~v~~~~~~~~~~~l~s~~~d~~----------------i~iwd~~~~~--~~~~~~---~~~ 149 (312)
T 4ery_A 100 LKTLK---------GHSNYVFCCNFNPQSNLIVSGSFDES----------------VRIWDVKTGK--CLKTLP---AHS 149 (312)
T ss_dssp EEEEE---------CCSSCEEEEEECSSSSEEEEEETTSC----------------EEEEETTTCC--EEEEEC---CCS
T ss_pred EEEEc---------CCCCCEEEEEEcCCCCEEEEEeCCCc----------------EEEEECCCCE--EEEEec---CCC
Confidence 22111 01111122222 4566677776543 6777876532 111111 111
Q ss_pred CCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCcccCCC
Q psy1098 194 SPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPILK 273 (390)
Q Consensus 194 ~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~ 273 (390)
. .-..+.... ++++++.|+.+ ..+.+||+.+.+-..... ....+.....+...+++.++.|+.
T Consensus 150 ~---~v~~~~~~~---~~~~l~~~~~d----~~i~~wd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~----- 212 (312)
T 4ery_A 150 D---PVSAVHFNR---DGSLIVSSSYD----GLCRIWDTASGQCLKTLI--DDDNPPVSFVKFSPNGKYILAATL----- 212 (312)
T ss_dssp S---CEEEEEECT---TSSEEEEEETT----SCEEEEETTTCCEEEEEC--CSSCCCEEEEEECTTSSEEEEEET-----
T ss_pred C---cEEEEEEcC---CCCEEEEEeCC----CcEEEEECCCCceeeEEe--ccCCCceEEEEECCCCCEEEEEcC-----
Confidence 1 112222221 56677888765 468889988765433110 111111111111225666777664
Q ss_pred ccccccccccceecCceEEeecCCCeeeecccccccCCCCCCCCCc-cee-eeCCEEEEEeccCCc
Q psy1098 274 DESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGH-CAS-VINSRMYIWSGRDDY 337 (390)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~-~~~-~~~~~l~v~GG~~~~ 337 (390)
-..+.+||+.+.+-...-.. ........ ... .-++.+++.||.++.
T Consensus 213 -------------d~~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~sg~~dg~ 260 (312)
T 4ery_A 213 -------------DNTLKLWDYSKGKCLKTYTG-----HKNEKYCIFANFSVTGGKWIVSGSEDNL 260 (312)
T ss_dssp -------------TTEEEEEETTTTEEEEEECS-----SCCSSSCCCEEEECSSSCEEEECCTTSC
T ss_pred -------------CCeEEEEECCCCcEEEEEEe-----cCCceEEEEEEEEeCCCcEEEEECCCCE
Confidence 35788899877653322110 11111111 111 225677788887754
No 47
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.08 E-value=0.82 Score=41.67 Aligned_cols=180 Identities=9% Similarity=-0.002 Sum_probs=89.8
Q ss_pred cceEEEECCCCcEEeeeecCCCCCCCceeeEEEe-CCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCC
Q psy1098 52 EELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVD-NTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPC 130 (390)
Q Consensus 52 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~ 130 (390)
..+.+||..+++...... ......-.+++.. ++.+++.|+.+ ..+.+||..+.+....-. .
T Consensus 113 ~~v~lw~~~~~~~~~~~~---~~~~~~v~~v~~s~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~---------~ 174 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAE---TDESTYVASVKWSHDGSFLSVGLGN------GLVDIYDVESQTKLRTMA---------G 174 (401)
T ss_dssp TEEEEEETTTCCEEEEEE---CCTTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTCCEEEEEC---------C
T ss_pred CeEEEeeCCCCcEeEeee---cCCCCCEEEEEECCCCCEEEEECCC------CeEEEEECcCCeEEEEec---------C
Confidence 458999998888765542 2111222223222 45566666643 247788887765333221 1
Q ss_pred CCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCC
Q psy1098 131 PRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKN 210 (390)
Q Consensus 131 ~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~ 210 (390)
......++..++.+++.|+.+. .+..+|+..... .-..+. .... .-.++...+ +
T Consensus 175 ~~~~v~~~~~~~~~l~~~~~dg----------------~i~i~d~~~~~~-~~~~~~---~~~~--~v~~~~~~~----~ 228 (401)
T 4aez_A 175 HQARVGCLSWNRHVLSSGSRSG----------------AIHHHDVRIANH-QIGTLQ---GHSS--EVCGLAWRS----D 228 (401)
T ss_dssp CSSCEEEEEEETTEEEEEETTS----------------EEEEEETTSSSC-EEEEEE---CCSS--CEEEEEECT----T
T ss_pred CCCceEEEEECCCEEEEEcCCC----------------CEEEEecccCcc-eeeEEc---CCCC--CeeEEEEcC----C
Confidence 1122233444666777776554 266777763221 111111 0111 112222322 6
Q ss_pred cEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE--CCEEEEEcC-cccCCCccccccccccceec
Q psy1098 211 TKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI--GDRMFIFGG-WVPILKDESRSLHEKEWKCS 287 (390)
Q Consensus 211 ~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG-~~~~~~~~~~~~~~~~~~~~ 287 (390)
+.+++.|+.+ ..+.+||+.+.+-.... .... ..-.+++.. +..+++.|| .. -
T Consensus 229 ~~~l~s~~~d----~~v~iwd~~~~~~~~~~--~~~~--~~v~~~~~~p~~~~ll~~~~gs~-----------------d 283 (401)
T 4aez_A 229 GLQLASGGND----NVVQIWDARSSIPKFTK--TNHN--AAVKAVAWCPWQSNLLATGGGTM-----------------D 283 (401)
T ss_dssp SSEEEEEETT----SCEEEEETTCSSEEEEE--CCCS--SCCCEEEECTTSTTEEEEECCTT-----------------T
T ss_pred CCEEEEEeCC----CeEEEccCCCCCccEEe--cCCc--ceEEEEEECCCCCCEEEEecCCC-----------------C
Confidence 6778888765 46889998875432211 1111 111222332 456777764 21 3
Q ss_pred CceEEeecCCCee
Q psy1098 288 NQLACLHLPEMTW 300 (390)
Q Consensus 288 ~~~~~~d~~~~~W 300 (390)
..+.+||+.+.+-
T Consensus 284 ~~i~i~d~~~~~~ 296 (401)
T 4aez_A 284 KQIHFWNAATGAR 296 (401)
T ss_dssp CEEEEEETTTCCE
T ss_pred CEEEEEECCCCCE
Confidence 5788899877653
No 48
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.01 E-value=0.57 Score=40.96 Aligned_cols=216 Identities=15% Similarity=0.119 Sum_probs=102.4
Q ss_pred CEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEE-eCCEEEEEcceeCCceeecceEEEEcCcceeE
Q psy1098 38 DLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVV-DNTRVLIFGGMVEYGKYSSDLYELQASKWEWK 116 (390)
Q Consensus 38 ~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~ 116 (390)
+..++.|+.+ ..+.+||..+.+......... .. ..-.+++. .+++.++.|+.+ ..+..||..+.+..
T Consensus 109 ~~~l~~~~~d----~~i~~~d~~~~~~~~~~~~~~-~~-~~i~~~~~~~~~~~l~~~~~d------g~v~~~d~~~~~~~ 176 (337)
T 1gxr_A 109 GCTLIVGGEA----STLSIWDLAAPTPRIKAELTS-SA-PACYALAISPDSKVCFSCCSD------GNIAVWDLHNQTLV 176 (337)
T ss_dssp SSEEEEEESS----SEEEEEECCCC--EEEEEEEC-SS-SCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEE
T ss_pred CCEEEEEcCC----CcEEEEECCCCCcceeeeccc-CC-CceEEEEECCCCCEEEEEeCC------CcEEEEeCCCCcee
Confidence 4455555422 357888888776433321101 11 11122222 244566666542 34778888876543
Q ss_pred EecCCCCCCCCCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCC
Q psy1098 117 RLKPKPPRFGSPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPS 194 (390)
Q Consensus 117 ~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~ 194 (390)
..-. ..........+ ++..++.|+.+. .+..+|+.+.. .-.... .+.
T Consensus 177 ~~~~---------~~~~~i~~~~~~~~~~~l~~~~~dg----------------~i~~~d~~~~~--~~~~~~----~~~ 225 (337)
T 1gxr_A 177 RQFQ---------GHTDGASCIDISNDGTKLWTGGLDN----------------TVRSWDLREGR--QLQQHD----FTS 225 (337)
T ss_dssp EEEC---------CCSSCEEEEEECTTSSEEEEEETTS----------------EEEEEETTTTE--EEEEEE----CSS
T ss_pred eeee---------cccCceEEEEECCCCCEEEEEecCC----------------cEEEEECCCCc--eEeeec----CCC
Confidence 3221 11111222233 455666666543 37778877532 111111 111
Q ss_pred CCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCC
Q psy1098 195 PRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILK 273 (390)
Q Consensus 195 ~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~ 273 (390)
+ -.++...+ +++.+++|+.+ ..+.+||+.+..-..+. . ....-.++... ++++++.|+.
T Consensus 226 ~--v~~~~~s~----~~~~l~~~~~~----~~i~~~~~~~~~~~~~~---~--~~~~v~~~~~~~~~~~l~~~~~----- 285 (337)
T 1gxr_A 226 Q--IFSLGYCP----TGEWLAVGMES----SNVEVLHVNKPDKYQLH---L--HESCVLSLKFAYCGKWFVSTGK----- 285 (337)
T ss_dssp C--EEEEEECT----TSSEEEEEETT----SCEEEEETTSSCEEEEC---C--CSSCEEEEEECTTSSEEEEEET-----
T ss_pred c--eEEEEECC----CCCEEEEEcCC----CcEEEEECCCCCeEEEc---C--CccceeEEEECCCCCEEEEecC-----
Confidence 1 12233332 56677777654 46888998876533321 1 11111222222 5667777764
Q ss_pred ccccccccccceecCceEEeecCCCeeeecccccccCCCCCCCCCcceee-eCCEEEEEeccCCc
Q psy1098 274 DESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASV-INSRMYIWSGRDDY 337 (390)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~ 337 (390)
-..+.+||+.+.+-..... ....-.+++. -++++++.|+.++.
T Consensus 286 -------------dg~i~~~~~~~~~~~~~~~--------~~~~v~~~~~s~~~~~l~~~~~dg~ 329 (337)
T 1gxr_A 286 -------------DNLLNAWRTPYGASIFQSK--------ESSSVLSCDISVDDKYIVTGSGDKK 329 (337)
T ss_dssp -------------TSEEEEEETTTCCEEEEEE--------CSSCEEEEEECTTSCEEEEEETTSC
T ss_pred -------------CCcEEEEECCCCeEEEEec--------CCCcEEEEEECCCCCEEEEecCCCe
Confidence 3568888887765432211 1111111222 25677788877643
No 49
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.93 E-value=0.82 Score=40.39 Aligned_cols=94 Identities=10% Similarity=0.095 Sum_probs=49.7
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
++++++.|+.+ ..+.+||+.+......- .+ ....-.+++.. +++.++.|+. -.
T Consensus 217 d~~~l~s~s~d----g~i~iwd~~~~~~~~~~-~~---h~~~v~~~~~sp~~~~l~s~s~------------------D~ 270 (321)
T 3ow8_A 217 DSQLLVTASDD----GYIKIYDVQHANLAGTL-SG---HASWVLNVAFCPDDTHFVSSSS------------------DK 270 (321)
T ss_dssp TSCEEEEECTT----SCEEEEETTTCCEEEEE-CC---CSSCEEEEEECTTSSEEEEEET------------------TS
T ss_pred CCCEEEEEcCC----CeEEEEECCCcceeEEE-cC---CCCceEEEEECCCCCEEEEEeC------------------CC
Confidence 67788888776 45888998766543311 01 11111122222 5667777775 34
Q ss_pred ceEEeecCCCeeeecccccccCCCCCCCCCcceeee--CCEEEEEeccCCc
Q psy1098 289 QLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVI--NSRMYIWSGRDDY 337 (390)
Q Consensus 289 ~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~ 337 (390)
.+.++|+.+.+-.. . +......-.++.+ +++.++.||.++.
T Consensus 271 ~v~iwd~~~~~~~~--~------~~~h~~~v~~v~~s~~g~~l~s~~~d~~ 313 (321)
T 3ow8_A 271 SVKVWDVGTRTCVH--T------FFDHQDQVWGVKYNGNGSKIVSVGDDQE 313 (321)
T ss_dssp CEEEEETTTTEEEE--E------ECCCSSCEEEEEECTTSSEEEEEETTCC
T ss_pred cEEEEeCCCCEEEE--E------EcCCCCcEEEEEECCCCCEEEEEeCCCe
Confidence 68888887765322 1 1111111122222 5677788887754
No 50
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.88 E-value=0.62 Score=41.35 Aligned_cols=30 Identities=7% Similarity=-0.010 Sum_probs=19.6
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeee
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPT 68 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~ 68 (390)
++++|+.+... ....+++||+.+++++.+.
T Consensus 50 dg~l~~~~~~~--~~~~v~~~~~~~g~~~~~~ 79 (347)
T 3hfq_A 50 KDCLYSVDKED--DEGGIAAWQIDGQTAHKLN 79 (347)
T ss_dssp TCEEEEEEEET--TEEEEEEEEEETTEEEEEE
T ss_pred CCeEEEEEecC--CCceEEEEEecCCcEEEee
Confidence 56666665421 2367889999877776655
No 51
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.86 E-value=0.92 Score=40.91 Aligned_cols=70 Identities=6% Similarity=-0.108 Sum_probs=36.7
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCC-C-CCCCceeeEEEE-CCEEEEEcCcccCCCcccccccccccee
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGP-Q-PLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKC 286 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~-~-p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~ 286 (390)
++ +++.|+.+ ..+.+||+.+.+-........ . +....-.+++.. ++++++.|+.+..
T Consensus 197 ~~-~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~--------------- 256 (397)
T 1sq9_A 197 RG-LIATGFNN----GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS--------------- 256 (397)
T ss_dssp TS-EEEEECTT----SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT---------------
T ss_pred Cc-eEEEEeCC----CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCC---------------
Confidence 55 77777665 468899998765443211100 0 001111222222 5677777764200
Q ss_pred cCceEEeecCCCe
Q psy1098 287 SNQLACLHLPEMT 299 (390)
Q Consensus 287 ~~~~~~~d~~~~~ 299 (390)
...+.+||+.+.+
T Consensus 257 ~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 257 FGCITLYETEFGE 269 (397)
T ss_dssp EEEEEEEETTTCC
T ss_pred CceEEEEECCCCc
Confidence 1578889987654
No 52
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.85 E-value=0.32 Score=49.25 Aligned_cols=213 Identities=11% Similarity=0.034 Sum_probs=103.8
Q ss_pred CCCCCCCceeEEecCCCCCCCCCCCceeeeEEe-CCEEEEEccCCCCcccceEEEECCCCcEEeeeecC---CCCCCCce
Q psy1098 4 LSDDNCPVYRWRRIDDPAGPQPRPRHGHRAVAI-KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKG---DIPPGCAA 79 (390)
Q Consensus 4 ~~~~~~~~~~W~~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~---~~p~~r~~ 79 (390)
|..+|+.+++++.+....+.++.... .++... ++.|++-.. +.+++||+.+++|..+.... .++... -
T Consensus 429 l~~~d~~~~~~~~~~~~~~~l~~~~v-~~i~~d~~g~lwigt~------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~-i 500 (795)
T 4a2l_A 429 LSILHRNSGQVENFNQRNSQLVNENV-YAILPDGEGNLWLGTL------SALVRFNPEQRSFTTIEKEKDGTPVVSKQ-I 500 (795)
T ss_dssp EEEEETTTCCEEEECTTTSCCSCSCE-EEEEECSSSCEEEEES------SCEEEEETTTTEEEECCBCTTCCBCCCCC-E
T ss_pred eeEEeCCCCcEEEeecCCCCcCCCee-EEEEECCCCCEEEEec------CceeEEeCCCCeEEEccccccccccCCce-E
Confidence 44566666667666432112222221 222222 355665432 34899999999998765321 111111 1
Q ss_pred eeEEEe-CCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEE-CCEEEEEcCccCCCCCC
Q psy1098 80 YGIVVD-NTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLI-GNKVYLFGGLANSGGDE 157 (390)
Q Consensus 80 ~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~ 157 (390)
.++... ++.|++.. . .-+++||+.+.++ .+...... ..++. ..-.+++.. ++.|++.. ..
T Consensus 501 ~~i~~d~~g~lWigt-~-------~Gl~~~~~~~~~~-~~~~~~~~-~~l~~-~~i~~i~~d~~g~lWigT-~~------ 562 (795)
T 4a2l_A 501 TTLFRDSHKRLWIGG-E-------EGLSVFKQEGLDI-QKASILPV-SNVTK-LFTNCIYEASNGIIWVGT-RE------ 562 (795)
T ss_dssp EEEEECTTCCEEEEE-S-------SCEEEEEEETTEE-EECCCSCS-CGGGG-SCEEEEEECTTSCEEEEE-SS------
T ss_pred EEEEECCCCCEEEEe-C-------CceEEEeCCCCeE-EEecCCCC-CCCCC-CeeEEEEECCCCCEEEEe-CC------
Confidence 222232 45666632 2 2388899988877 44321000 00111 111122222 46777632 21
Q ss_pred CCCCCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeE
Q psy1098 158 TKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTW 237 (390)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W 237 (390)
-+++||..+ .++........+|.... .+++.. .++.|++.+. +.+.+||+.+.++
T Consensus 563 -----------Gl~~~d~~~---~~~~~~~~~~gl~~~~i-~~i~~d----~~g~lWi~t~------~Gl~~~~~~~~~~ 617 (795)
T 4a2l_A 563 -----------GFYCFNEKD---KQIKRYNTTNGLPNNVV-YGILED----SFGRLWLSTN------RGISCFNPETEKF 617 (795)
T ss_dssp -----------CEEEEETTT---TEEEEECGGGTCSCSCE-EEEEEC----TTSCEEEEET------TEEEEEETTTTEE
T ss_pred -----------CceeECCCC---CcEEEeCCCCCCchhhe-EEEEEC----CCCCEEEEcC------CceEEEcCCCCcE
Confidence 177788765 34444322223443322 222222 2677887763 4689999999988
Q ss_pred eecccCCCCCCCCce-eeEEEE-CCEEEEEcCc
Q psy1098 238 QKPQILGPQPLPRSL-HTACVI-GDRMFIFGGW 268 (390)
Q Consensus 238 ~~~~~~~~~p~~r~~-~~~~~~-~~~i~i~GG~ 268 (390)
+.......++..... .+++.. ++.||+ ||.
T Consensus 618 ~~~~~~dGl~~~~f~~~~~~~~~~G~l~~-g~~ 649 (795)
T 4a2l_A 618 RNFTESDGLQSNQFNTASYCRTSVGQMYF-GGI 649 (795)
T ss_dssp EEECGGGTCSCSCEEEEEEEECTTSCEEE-EET
T ss_pred EEcCCcCCCccccCccCceeECCCCeEEE-ecC
Confidence 875433334444433 233333 455555 553
No 53
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.83 E-value=0.37 Score=42.25 Aligned_cols=220 Identities=11% Similarity=0.035 Sum_probs=102.3
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEe-eeecCCCCCCCceeeEEEe-CCEEEEEcceeCCceeecceEEEEcCcce
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFI-PTLKGDIPPGCAAYGIVVD-NTRVLIFGGMVEYGKYSSDLYELQASKWE 114 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~-~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~~ 114 (390)
++++++.|+ + ..+.+||..+..... +...........-.+++.. +++.++.|+.+ ..+..||..+.+
T Consensus 62 ~~~~l~~~~-d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~~d~~~~~ 130 (337)
T 1gxr_A 62 PTRHVYTGG-K----GCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA------STLSIWDLAAPT 130 (337)
T ss_dssp SSSEEEEEC-B----SEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS------SEEEEEECCCC-
T ss_pred CCcEEEEcC-C----CeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC------CcEEEEECCCCC
Confidence 455666665 2 457888886654211 1100001111112222222 34566666542 347788887765
Q ss_pred eEEecCCCCCCCCCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCC
Q psy1098 115 WKRLKPKPPRFGSPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGL 192 (390)
Q Consensus 115 W~~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~ 192 (390)
........ ..........+ ++..++.|+.+.. +..+|+.+.. .-..+. ..
T Consensus 131 ~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~dg~----------------v~~~d~~~~~--~~~~~~---~~ 182 (337)
T 1gxr_A 131 PRIKAELT-------SSAPACYALAISPDSKVCFSCCSDGN----------------IAVWDLHNQT--LVRQFQ---GH 182 (337)
T ss_dssp -EEEEEEE-------CSSSCEEEEEECTTSSEEEEEETTSC----------------EEEEETTTTE--EEEEEC---CC
T ss_pred cceeeecc-------cCCCceEEEEECCCCCEEEEEeCCCc----------------EEEEeCCCCc--eeeeee---cc
Confidence 43322211 11111222223 4566666665432 6778876531 112211 11
Q ss_pred CCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccC
Q psy1098 193 PSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPI 271 (390)
Q Consensus 193 p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~ 271 (390)
. . .-.++...+ +++.++.++.+ ..+.+||+.+.+-.... .. ...-.+++.. +++++++|+.
T Consensus 183 ~-~-~i~~~~~~~----~~~~l~~~~~d----g~i~~~d~~~~~~~~~~---~~--~~~v~~~~~s~~~~~l~~~~~--- 244 (337)
T 1gxr_A 183 T-D-GASCIDISN----DGTKLWTGGLD----NTVRSWDLREGRQLQQH---DF--TSQIFSLGYCPTGEWLAVGME--- 244 (337)
T ss_dssp S-S-CEEEEEECT----TSSEEEEEETT----SEEEEEETTTTEEEEEE---EC--SSCEEEEEECTTSSEEEEEET---
T ss_pred c-C-ceEEEEECC----CCCEEEEEecC----CcEEEEECCCCceEeee---cC--CCceEEEEECCCCCEEEEEcC---
Confidence 1 1 112223322 56667777655 46889998877543321 11 1112222322 5667777764
Q ss_pred CCccccccccccceecCceEEeecCCCeeeecccccccCCCCCCCCCcceeee--CCEEEEEeccCCc
Q psy1098 272 LKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVI--NSRMYIWSGRDDY 337 (390)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~ 337 (390)
...+.+||+.+.+-..+.. . ...-..+.+ ++++++.|+.++.
T Consensus 245 ---------------~~~i~~~~~~~~~~~~~~~------~---~~~v~~~~~~~~~~~l~~~~~dg~ 288 (337)
T 1gxr_A 245 ---------------SSNVEVLHVNKPDKYQLHL------H---ESCVLSLKFAYCGKWFVSTGKDNL 288 (337)
T ss_dssp ---------------TSCEEEEETTSSCEEEECC------C---SSCEEEEEECTTSSEEEEEETTSE
T ss_pred ---------------CCcEEEEECCCCCeEEEcC------C---ccceeEEEECCCCCEEEEecCCCc
Confidence 3578889987765332221 1 111122222 5677777877643
No 54
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.76 E-value=0.96 Score=39.92 Aligned_cols=208 Identities=10% Similarity=-0.010 Sum_probs=98.4
Q ss_pred CEEEEEccCCC--CcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 38 DLMLVFGGGNE--GIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 38 ~~iyv~GG~~~--~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
+.+|+...... .....++.+|+.+.+.......+..| ...++...++.+|+.+... ..++++|+.+.+-
T Consensus 53 ~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~---~~~~~s~dg~~l~v~~~~~------~~v~~~d~~~~~~ 123 (353)
T 3vgz_A 53 NALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKP---FGATINNTTQTLWFGNTVN------SAVTAIDAKTGEV 123 (353)
T ss_dssp TEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCC---CSEEEETTTTEEEEEETTT------TEEEEEETTTCCE
T ss_pred CEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCc---ceEEECCCCCEEEEEecCC------CEEEEEeCCCCee
Confidence 46776653221 13567999999887754433211111 1122222345677776532 3588999987754
Q ss_pred EEecCCCCCCC-CCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCC
Q psy1098 116 KRLKPKPPRFG-SPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGL 192 (390)
Q Consensus 116 ~~~~~~~~~~~-~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~ 192 (390)
...-....... ....+..-+.++.. ++.+|+.+.... ..++.+|..+.. .-..+...+..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~---------------~~i~~~d~~~~~--~~~~~~~~~~~ 186 (353)
T 3vgz_A 124 KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKE---------------SVIWVVDGGNIK--LKTAIQNTGKM 186 (353)
T ss_dssp EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSS---------------CEEEEEETTTTE--EEEEECCCCTT
T ss_pred EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCC---------------ceEEEEcCCCCc--eEEEecCCCCc
Confidence 33222110000 00001111222222 356776652211 137888887642 22222111111
Q ss_pred CCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE--CCEEEEEcCccc
Q psy1098 193 PSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI--GDRMFIFGGWVP 270 (390)
Q Consensus 193 p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~ 270 (390)
| ..+...++ ++.+|+... + ..+.++|+.+.+-......+.........+++.. ++.+|+....
T Consensus 187 ~-----~~~~~s~d---g~~l~~~~~-~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-- 251 (353)
T 3vgz_A 187 S-----TGLALDSE---GKRLYTTNA-D----GELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK-- 251 (353)
T ss_dssp C-----CCCEEETT---TTEEEEECT-T----SEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS--
T ss_pred c-----ceEEECCC---CCEEEEEcC-C----CeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC--
Confidence 1 23333332 456666643 2 5788999988764432212111111122223333 3456666432
Q ss_pred CCCccccccccccceecCceEEeecCCCeeee
Q psy1098 271 ILKDESRSLHEKEWKCSNQLACLHLPEMTWED 302 (390)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 302 (390)
...+.+||+.+.+...
T Consensus 252 ----------------~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 252 ----------------AAEVLVVDTRNGNILA 267 (353)
T ss_dssp ----------------SSEEEEEETTTCCEEE
T ss_pred ----------------CCEEEEEECCCCcEEE
Confidence 3689999998876543
No 55
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.73 E-value=1 Score=40.02 Aligned_cols=71 Identities=14% Similarity=0.280 Sum_probs=39.0
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEE-EeCCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIV-VDNTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
++.+++.|+.+ ..+.+||..+.++..+..-.. ....-.++. .-++++++.|+.+ ..+..||..+.++
T Consensus 19 ~~~~l~~~~~d----~~v~i~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~ 86 (372)
T 1k8k_C 19 DRTQIAICPNN----HEVHIYEKSGNKWVQVHELKE--HNGQVTGVDWAPDSNRIVTCGTD------RNAYVWTLKGRTW 86 (372)
T ss_dssp TSSEEEEECSS----SEEEEEEEETTEEEEEEEEEC--CSSCEEEEEEETTTTEEEEEETT------SCEEEEEEETTEE
T ss_pred CCCEEEEEeCC----CEEEEEeCCCCcEEeeeeecC--CCCcccEEEEeCCCCEEEEEcCC------CeEEEEECCCCee
Confidence 45567777633 458889998887655442111 111112222 2245566666642 2477788877766
Q ss_pred EEec
Q psy1098 116 KRLK 119 (390)
Q Consensus 116 ~~~~ 119 (390)
....
T Consensus 87 ~~~~ 90 (372)
T 1k8k_C 87 KPTL 90 (372)
T ss_dssp EEEE
T ss_pred eeeE
Confidence 5443
No 56
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.62 E-value=0.88 Score=38.54 Aligned_cols=215 Identities=13% Similarity=0.058 Sum_probs=99.0
Q ss_pred CCEEEE-EccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEe-CCEEEEEcceeCCceeecceEEEEcCcce
Q psy1098 37 KDLMLV-FGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVD-NTRVLIFGGMVEYGKYSSDLYELQASKWE 114 (390)
Q Consensus 37 ~~~iyv-~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~~ 114 (390)
++.+|+ .... ...+..||+.+.....+.. .....-++++.. +++||+... ...+++||+....
T Consensus 34 ~g~l~v~~~~~----~~~i~~~~~~~~~~~~~~~----~~~~~p~~i~~~~~g~l~v~~~-------~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 34 AGNVYVTSEGM----YGRVVKLATGSTGTTVLPF----NGLYQPQGLAVDGAGTVYVTDF-------NNRVVTLAAGSNN 98 (270)
T ss_dssp TCCEEEEECSS----SCEEEEECC-----EECCC----CSCCSCCCEEECTTCCEEEEET-------TTEEEEECTTCSC
T ss_pred CCCEEEEccCC----CCcEEEecCCCcccceEee----CCcCCcceeEECCCCCEEEEcC-------CCEEEEEeCCCce
Confidence 456888 4332 2457788886655443321 111112334443 457888654 1348889988765
Q ss_pred eEEecCCCCCCCCCCCCCccceEEEE-CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCC
Q psy1098 115 WKRLKPKPPRFGSPPCPRLGHSFTLI-GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLP 193 (390)
Q Consensus 115 W~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p 193 (390)
...+... ....-..++.. ++++|+...... .+++++..+. ...... .....
T Consensus 99 ~~~~~~~--------~~~~p~~i~~~~~g~l~v~~~~~~----------------~i~~~~~~~~---~~~~~~-~~~~~ 150 (270)
T 1rwi_B 99 QTVLPFD--------GLNYPEGLAVDTQGAVYVADRGNN----------------RVVKLAAGSK---TQTVLP-FTGLN 150 (270)
T ss_dssp CEECCCC--------SCSSEEEEEECTTCCEEEEEGGGT----------------EEEEECTTCC---SCEECC-CCSCC
T ss_pred EeeeecC--------CcCCCcceEECCCCCEEEEECCCC----------------EEEEEECCCc---eeEeec-cccCC
Confidence 4433211 11112233333 567887643221 3666655431 111110 11111
Q ss_pred CCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCC
Q psy1098 194 SPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPIL 272 (390)
Q Consensus 194 ~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~ 272 (390)
.+ ..++..+ ++++|+..... ..+.+||+.+..-.... .... ..-.+++.- ++.+|+....
T Consensus 151 ~p---~~i~~~~----~g~l~v~~~~~----~~i~~~~~~~~~~~~~~-~~~~---~~p~~i~~d~~g~l~v~~~~---- 211 (270)
T 1rwi_B 151 DP---DGVAVDN----SGNVYVTDTDN----NRVVKLEAESNNQVVLP-FTDI---TAPWGIAVDEAGTVYVTEHN---- 211 (270)
T ss_dssp SC---CCEEECT----TCCEEEEEGGG----TEEEEECTTTCCEEECC-CSSC---CSEEEEEECTTCCEEEEETT----
T ss_pred Cc---eeEEEeC----CCCEEEEECCC----CEEEEEecCCCceEeec-ccCC---CCceEEEECCCCCEEEEECC----
Confidence 11 2233321 56788875422 46889998876543321 1111 111233332 4578887542
Q ss_pred CccccccccccceecCceEEeecCCCeeeecccccccCCCCCCCCCcceeee--CCEEEEEeccC
Q psy1098 273 KDESRSLHEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVI--NSRMYIWSGRD 335 (390)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~ 335 (390)
...+.+||+.+..-..... ........+.+ +++||+....+
T Consensus 212 --------------~~~v~~~~~~~~~~~~~~~--------~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 212 --------------TNQVVKLLAGSTTSTVLPF--------TGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp --------------TSCEEEECTTCSCCEECCC--------CSCSCEEEEEECTTCCEEEEEGGG
T ss_pred --------------CCcEEEEcCCCCcceeecc--------CCCCCceeEEECCCCCEEEEECCC
Confidence 3568889887654332221 11111222333 56788876554
No 57
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.53 E-value=1.4 Score=40.12 Aligned_cols=96 Identities=16% Similarity=0.101 Sum_probs=50.6
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCE-EEEEcCcccCCCccccccccccceec
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDR-MFIFGGWVPILKDESRSLHEKEWKCS 287 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~-i~i~GG~~~~~~~~~~~~~~~~~~~~ 287 (390)
++++++.|+.+ ..+.+||+.+.+-.... .......-.+++.. ++. +++.|+. -
T Consensus 258 ~~~~l~~~~~d----g~i~i~d~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l~~g~~------------------d 312 (420)
T 3vl1_A 258 YGKYVIAGHVS----GVITVHNVFSKEQTIQL---PSKFTCSCNSLTVDGNNANYIYAGYE------------------N 312 (420)
T ss_dssp TTEEEEEEETT----SCEEEEETTTCCEEEEE---CCTTSSCEEEEEECSSCTTEEEEEET------------------T
T ss_pred CCCEEEEEcCC----CeEEEEECCCCceeEEc---ccccCCCceeEEEeCCCCCEEEEEeC------------------C
Confidence 67778888765 35889998876533211 11111111222222 344 7777764 3
Q ss_pred CceEEeecCCCee--eecccccccCCCCCCCCCcceeeeCCEEEEEeccCCc
Q psy1098 288 NQLACLHLPEMTW--EDLSVEVTDDFLPKPRAGHCASVINSRMYIWSGRDDY 337 (390)
Q Consensus 288 ~~~~~~d~~~~~W--~~v~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~ 337 (390)
..+.+||+.+.+- ..+.. . ....-..+..-++++++.||.++.
T Consensus 313 g~i~vwd~~~~~~~~~~~~~------~-~~~~v~~~~~~~~~~l~s~~~d~~ 357 (420)
T 3vl1_A 313 GMLAQWDLRSPECPVGEFLI------N-EGTPINNVYFAAGALFVSSGFDTS 357 (420)
T ss_dssp SEEEEEETTCTTSCSEEEEE------S-TTSCEEEEEEETTEEEEEETTTEE
T ss_pred CeEEEEEcCCCcCchhhhhc------c-CCCCceEEEeCCCCEEEEecCCcc
Confidence 5788899877532 22221 0 111112223337888888888743
No 58
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.51 E-value=0.2 Score=45.11 Aligned_cols=152 Identities=10% Similarity=0.087 Sum_probs=68.0
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCce-eeEEE-eCCEEEEEcceeCCceeecceEEEEcCcce
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAA-YGIVV-DNTRVLIFGGMVEYGKYSSDLYELQASKWE 114 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~ 114 (390)
++.+++.|+.+ ..+.+||..+..|..+. .+...... .++.. -++++++.|+.+ ..+.+||..+..
T Consensus 22 ~g~~l~~~~~d----~~i~iw~~~~~~~~~~~---~~~~h~~~v~~~~~s~~~~~l~s~s~d------~~v~vwd~~~~~ 88 (377)
T 3dwl_C 22 QRTEFVTTTAT----NQVELYEQDGNGWKHAR---TFSDHDKIVTCVDWAPKSNRIVTCSQD------RNAYVYEKRPDG 88 (377)
T ss_dssp SSSEEECCCSS----SCBCEEEEETTEEEECC---CBCCCSSCEEEEEECTTTCCEEEEETT------SSEEEC------
T ss_pred CCCEEEEecCC----CEEEEEEccCCceEEEE---EEecCCceEEEEEEeCCCCEEEEEeCC------CeEEEEEcCCCC
Confidence 45666777643 45788888888776654 22221111 22222 245666666653 347777777765
Q ss_pred -eEEecCCCCCCCCCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCC
Q psy1098 115 -WKRLKPKPPRFGSPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGG 191 (390)
Q Consensus 115 -W~~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~ 191 (390)
|....... .......++.+ ++..++.|+.+.. +..+|+.+. ..|..+.....
T Consensus 89 ~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~----------------i~iwd~~~~--~~~~~~~~~~~ 143 (377)
T 3dwl_C 89 TWKQTLVLL-------RLNRAATFVRWSPNEDKFAVGSGARV----------------ISVCYFEQE--NDWWVSKHLKR 143 (377)
T ss_dssp CCCCEEECC-------CCSSCEEEEECCTTSSCCEEEESSSC----------------EEECCC-------CCCCEEECS
T ss_pred ceeeeeEec-------ccCCceEEEEECCCCCEEEEEecCCe----------------EEEEEECCc--ccceeeeEeec
Confidence 43332211 11111222333 4566666665432 566666653 22332211111
Q ss_pred CCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCC
Q psy1098 192 LPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSM 235 (390)
Q Consensus 192 ~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~ 235 (390)
+....-.++...+ ++++++.|+.+ ..+.+||+.+.
T Consensus 144 -~h~~~v~~~~~~~----~~~~l~~~~~d----~~i~iwd~~~~ 178 (377)
T 3dwl_C 144 -PLRSTILSLDWHP----NNVLLAAGCAD----RKAYVLSAYVR 178 (377)
T ss_dssp -SCCSCEEEEEECT----TSSEEEEEESS----SCEEEEEECCS
T ss_pred -ccCCCeEEEEEcC----CCCEEEEEeCC----CEEEEEEEEec
Confidence 0111112233332 56777888765 45778887543
No 59
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.50 E-value=1.5 Score=40.18 Aligned_cols=191 Identities=11% Similarity=-0.037 Sum_probs=93.7
Q ss_pred ceEEEECCCCcEEeeeecCCCCCCCceeeEEEe-CCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCC
Q psy1098 53 ELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVD-NTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCP 131 (390)
Q Consensus 53 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~ 131 (390)
.++.+|+.+..+..+.. .+....-.+++.. ++.+++.++.. ..+.++|+.+.+.....+.. .....
T Consensus 102 ~l~~~d~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~~~~~~~~------~~i~~~d~~~g~~~~~~~~~----~~~~~ 168 (433)
T 3bws_A 102 KLIALDKEGITHRFISR---FKTGFQPKSVRFIDNTRLAIPLLED------EGMDVLDINSGQTVRLSPPE----KYKKK 168 (433)
T ss_dssp CEEECCBTTCSEEEEEE---EECSSCBCCCEESSSSEEEEEBTTS------SSEEEEETTTCCEEEECCCH----HHHTT
T ss_pred EEEEECCCCCcceEEEE---EcCCCCceEEEEeCCCeEEEEeCCC------CeEEEEECCCCeEeeecCcc----ccccc
Confidence 67888887776655442 1111111222222 67788877643 34888999887655433210 00011
Q ss_pred CccceEEEE--CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCC
Q psy1098 132 RLGHSFTLI--GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYK 209 (390)
Q Consensus 132 r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~ 209 (390)
.....++.+ ++.+++.++.+. .+..+|+.+.. ....+.. ....-.+++..++
T Consensus 169 ~~~v~~~~~~~~~~~~~s~~~d~----------------~v~~~d~~~~~--~~~~~~~-----~~~~~~~~~~~~~--- 222 (433)
T 3bws_A 169 LGFVETISIPEHNELWVSQMQAN----------------AVHVFDLKTLA--YKATVDL-----TGKWSKILLYDPI--- 222 (433)
T ss_dssp CCEEEEEEEGGGTEEEEEEGGGT----------------EEEEEETTTCC--EEEEEEC-----SSSSEEEEEEETT---
T ss_pred CCceeEEEEcCCCEEEEEECCCC----------------EEEEEECCCce--EEEEEcC-----CCCCeeEEEEcCC---
Confidence 111122333 578888776543 37778876532 1122111 1111123333322
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
+..+|+.+..+ ..+.+||+.+.+..... +....-.+++.. +++.+++++........ --.
T Consensus 223 ~~~l~~~~~~~----~~i~~~d~~~~~~~~~~-----~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~----------~dg 283 (433)
T 3bws_A 223 RDLVYCSNWIS----EDISVIDRKTKLEIRKT-----DKIGLPRGLLLSKDGKELYIAQFSASNQES----------GGG 283 (433)
T ss_dssp TTEEEEEETTT----TEEEEEETTTTEEEEEC-----CCCSEEEEEEECTTSSEEEEEEEESCTTCS----------CCE
T ss_pred CCEEEEEecCC----CcEEEEECCCCcEEEEe-----cCCCCceEEEEcCCCCEEEEEECCCCcccc----------CCC
Confidence 55677776544 46899999887654421 111112233332 45555555432111000 024
Q ss_pred ceEEeecCCCeee
Q psy1098 289 QLACLHLPEMTWE 301 (390)
Q Consensus 289 ~~~~~d~~~~~W~ 301 (390)
.+.+||+.+.+-.
T Consensus 284 ~i~~~d~~~~~~~ 296 (433)
T 3bws_A 284 RLGIYSMDKEKLI 296 (433)
T ss_dssp EEEEEETTTTEEE
T ss_pred eEEEEECCCCcEE
Confidence 7889998877543
No 60
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.46 E-value=1.4 Score=39.68 Aligned_cols=64 Identities=11% Similarity=-0.048 Sum_probs=33.2
Q ss_pred CEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEe--CCEEEEEcceeCCceeecceEEEEcCcce
Q psy1098 38 DLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVD--NTRVLIFGGMVEYGKYSSDLYELQASKWE 114 (390)
Q Consensus 38 ~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~~~~~ 114 (390)
+.+++.|+.+ ..+.+||..+.+-.... ..+.......+... ++.+++.|+.. ..+..||..+.+
T Consensus 112 ~~~l~s~~~d----~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~d~~~~~ 177 (408)
T 4a11_B 112 TGMFTSSSFD----KTLKVWDTNTLQTADVF---NFEETVYSHHMSPVSTKHCLVAVGTRG------PKVQLCDLKSGS 177 (408)
T ss_dssp TTCEEEEETT----SEEEEEETTTTEEEEEE---ECSSCEEEEEECSSCSSCCEEEEEESS------SSEEEEESSSSC
T ss_pred CcEEEEEeCC----CeEEEeeCCCCccceec---cCCCceeeeEeecCCCCCcEEEEEcCC------CeEEEEeCCCcc
Confidence 3466666532 35888898877654433 12222111222111 33466666653 347788887654
No 61
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.46 E-value=1.3 Score=39.34 Aligned_cols=217 Identities=13% Similarity=0.161 Sum_probs=105.2
Q ss_pred eeEEecCCCCCCCCC-CCceeeeEEeCCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEE-EeCCEE
Q psy1098 12 YRWRRIDDPAGPQPR-PRHGHRAVAIKDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIV-VDNTRV 89 (390)
Q Consensus 12 ~~W~~~~~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~-~~~~~i 89 (390)
.+|+.+... .+. .....++...++.+|+.|- . ..++.-.=.-.+|+.+.....+|. ..+.++ ..++.+
T Consensus 66 ~tW~~~~~~---~~~~~~~~~~i~~~~~~~~~~g~-~----g~i~~S~DgG~tW~~~~~~~~~~~--~~~~i~~~~~~~~ 135 (327)
T 2xbg_A 66 QTWEPRTLV---LDHSDYRFNSVSFQGNEGWIVGE-P----PIMLHTTDGGQSWSQIPLDPKLPG--SPRLIKALGNGSA 135 (327)
T ss_dssp SSCEECCCC---CSCCCCEEEEEEEETTEEEEEEE-T----TEEEEESSTTSSCEECCCCTTCSS--CEEEEEEEETTEE
T ss_pred CCCeECCCC---CCCCCccEEEEEecCCeEEEEEC-C----CeEEEECCCCCCceECccccCCCC--CeEEEEEECCCCE
Confidence 479888521 111 2233344445678888753 1 123332222568998763211221 223333 346788
Q ss_pred EEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEE-CCEEEEEcCccCCCCCCCCCCCcccccc
Q psy1098 90 LIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLI-GNKVYLFGGLANSGGDETKPTPSYKYLD 168 (390)
Q Consensus 90 yv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~~ 168 (390)
|+.|.. + .+++-+-...+|+++... .+..-+.++.. ++.++++|- ...
T Consensus 136 ~~~~~~---g----~v~~S~DgG~tW~~~~~~--------~~~~~~~~~~~~~~~~~~~g~-~G~--------------- 184 (327)
T 2xbg_A 136 EMITNV---G----AIYRTKDSGKNWQALVQE--------AIGVMRNLNRSPSGEYVAVSS-RGS--------------- 184 (327)
T ss_dssp EEEETT---C----CEEEESSTTSSEEEEECS--------CCCCEEEEEECTTSCEEEEET-TSS---------------
T ss_pred EEEeCC---c----cEEEEcCCCCCCEEeecC--------CCcceEEEEEcCCCcEEEEEC-CCc---------------
Confidence 887642 1 255443345679988642 12222333333 456666542 211
Q ss_pred ceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecC-CCeEeecccCCCCC
Q psy1098 169 DFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDIN-SMTWQKPQILGPQP 247 (390)
Q Consensus 169 ~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~-~~~W~~~~~~~~~p 247 (390)
+++-+-. ....|+.+.. +.....+.++..+ ++.+|+.+.. ..+++.+.. ..+|+.+.. +.++
T Consensus 185 -~~~S~d~--gG~tW~~~~~----~~~~~~~~~~~~~----~g~~~~~~~~-----G~~~~s~~D~G~tW~~~~~-~~~~ 247 (327)
T 2xbg_A 185 -FYSTWEP--GQTAWEPHNR----TTSRRLHNMGFTP----DGRLWMIVNG-----GKIAFSDPDNSENWGELLS-PLRR 247 (327)
T ss_dssp -EEEEECT--TCSSCEEEEC----CSSSCEEEEEECT----TSCEEEEETT-----TEEEEEETTEEEEECCCBC-TTSS
T ss_pred -EEEEeCC--CCCceeECCC----CCCCccceeEECC----CCCEEEEeCC-----ceEEEecCCCCCeeEeccC-Cccc
Confidence 3332211 1257887532 2233344444432 5678877642 124444333 568998542 1122
Q ss_pred CCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecCceEEeecCCCeeeeccc
Q psy1098 248 LPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTWEDLSV 305 (390)
Q Consensus 248 ~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~ 305 (390)
.....++++.. ++.+|+.|+. ..+++-.-...+|+.+..
T Consensus 248 ~~~~~~~v~~~~~~~~~~~g~~-------------------g~i~~S~DgG~tW~~~~~ 287 (327)
T 2xbg_A 248 NSVGFLDLAYRTPNEVWLAGGA-------------------GALLCSQDGGQTWQQDVD 287 (327)
T ss_dssp CCSCEEEEEESSSSCEEEEEST-------------------TCEEEESSTTSSCEECGG
T ss_pred CCcceEEEEecCCCEEEEEeCC-------------------CeEEEeCCCCcccEEcCc
Confidence 22223344333 5778888762 234333334678998874
No 62
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.45 E-value=0.98 Score=41.46 Aligned_cols=83 Identities=12% Similarity=0.067 Sum_probs=41.4
Q ss_pred CcEEEEecCCCeEeecccCCCCCCCCceeeEEEE--CCEEEEEcCcccCCCccccccccccceecCceEEeecCCCeeee
Q psy1098 225 SDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI--GDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTWED 302 (390)
Q Consensus 225 ~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 302 (390)
..|.+||+.+.+-..... ... ...+++.. ++.+++..|.. -..+.+||..+.+ .
T Consensus 301 ~~I~iwd~~t~~~~~~~~---~~~--~v~~~~~~~~~~~lv~~sg~~-----------------d~~I~iwd~~~~~--~ 356 (420)
T 4gga_A 301 RHIRIWNVCSGACLSAVD---AHS--QVCSILWSPHYKELISGHGFA-----------------QNQLVIWKYPTMA--K 356 (420)
T ss_dssp CEEEEEETTTTEEEEEEE---CSS--CEEEEEEETTTTEEEEEECTT-----------------TCCEEEEETTTCC--E
T ss_pred CEEEEEeCCccccceeec---ccc--ceeeeeecCCCCeEEEEEecC-----------------CCEEEEEECCCCc--E
Confidence 457888988876544211 111 11122222 45555555542 3468888877654 3
Q ss_pred cccccccCCCC--CCCCCcceeeeCCEEEEEeccCCc
Q psy1098 303 LSVEVTDDFLP--KPRAGHCASVINSRMYIWSGRDDY 337 (390)
Q Consensus 303 v~~~~~~~~~p--~~r~~~~~~~~~~~l~v~GG~~~~ 337 (390)
+.. +. ..+....+..-++++++-||.|+.
T Consensus 357 v~~------l~gH~~~V~~l~~spdg~~l~S~s~D~t 387 (420)
T 4gga_A 357 VAE------LKGHTSRVLSLTMSPDGATVASAAADET 387 (420)
T ss_dssp EEE------ECCCSSCEEEEEECTTSSCEEEEETTTE
T ss_pred EEE------EcCCCCCEEEEEEcCCCCEEEEEecCCe
Confidence 332 21 111111111226778888888754
No 63
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.41 E-value=1 Score=41.52 Aligned_cols=202 Identities=10% Similarity=0.022 Sum_probs=99.7
Q ss_pred CEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEE--eCCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 38 DLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVV--DNTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 38 ~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
++.+++++... ....++++|+.+++...+. ..+. ...+++. .+..|++.+.... ...++.+|..+.+.
T Consensus 190 g~~la~~s~~~-~~~~i~~~d~~tg~~~~l~---~~~~--~~~~~~~spdg~~la~~~~~~g----~~~i~~~d~~~~~~ 259 (415)
T 2hqs_A 190 GSKLAYVTFES-GRSALVIQTLANGAVRQVA---SFPR--HNGAPAFSPDGSKLAFALSKTG----SLNLYVMDLASGQI 259 (415)
T ss_dssp SSEEEEEECTT-SSCEEEEEETTTCCEEEEE---CCSS--CEEEEEECTTSSEEEEEECTTS----SCEEEEEETTTCCE
T ss_pred CCEEEEEEecC-CCcEEEEEECCCCcEEEee---cCCC--cccCEEEcCCCCEEEEEEecCC----CceEEEEECCCCCE
Confidence 44444444222 1357899999888876654 2222 1222222 2344554543321 24599999988776
Q ss_pred EEecCCCCCCCCCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCC
Q psy1098 116 KRLKPKPPRFGSPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLP 193 (390)
Q Consensus 116 ~~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p 193 (390)
..+... . .......+ +++.+++++.... ...++.+|+.+. +-..+..
T Consensus 260 ~~l~~~---------~-~~~~~~~~spdg~~l~~~s~~~g-------------~~~i~~~d~~~~---~~~~l~~----- 308 (415)
T 2hqs_A 260 RQVTDG---------R-SNNTEPTWFPDSQNLAFTSDQAG-------------RPQVYKVNINGG---APQRITW----- 308 (415)
T ss_dssp EECCCC---------S-SCEEEEEECTTSSEEEEEECTTS-------------SCEEEEEETTSS---CCEECCC-----
T ss_pred EeCcCC---------C-CcccceEECCCCCEEEEEECCCC-------------CcEEEEEECCCC---CEEEEec-----
Confidence 554431 1 11222333 4544444432111 124788888763 2222111
Q ss_pred CCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCcccCCC
Q psy1098 194 SPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPILK 273 (390)
Q Consensus 194 ~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~ 273 (390)
...........+ +++.+++++..+ ....++++|+.+.+...+.. .. .....+..-+++.+++++....
T Consensus 309 ~~~~~~~~~~sp----dG~~l~~~~~~~-g~~~i~~~d~~~~~~~~l~~---~~--~~~~~~~spdg~~l~~~s~~~~-- 376 (415)
T 2hqs_A 309 EGSQNQDADVSS----DGKFMVMVSSNG-GQQHIAKQDLATGGVQVLSS---TF--LDETPSLAPNGTMVIYSSSQGM-- 376 (415)
T ss_dssp SSSEEEEEEECT----TSSEEEEEEECS-SCEEEEEEETTTCCEEECCC---SS--SCEEEEECTTSSEEEEEEEETT--
T ss_pred CCCcccCeEECC----CCCEEEEEECcC-CceEEEEEECCCCCEEEecC---CC--CcCCeEEcCCCCEEEEEEcCCC--
Confidence 111222233332 455555544321 12478999999888766431 11 1112222226677777654211
Q ss_pred ccccccccccceecCceEEeecCCCeeeeccc
Q psy1098 274 DESRSLHEKEWKCSNQLACLHLPEMTWEDLSV 305 (390)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~~ 305 (390)
...++++|+.+...+.+..
T Consensus 377 -------------~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 377 -------------GSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp -------------EEEEEEEETTSCCEEECCC
T ss_pred -------------ccEEEEEECCCCcEEEeeC
Confidence 2378999988777666643
No 64
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.38 E-value=1.2 Score=38.48 Aligned_cols=213 Identities=10% Similarity=0.061 Sum_probs=103.2
Q ss_pred CEEEEEccCCCCcccceEEEECCCCc--EEeeeecCCCCC-CCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcc-
Q psy1098 38 DLMLVFGGGNEGIVEELHVFNTATNQ--WFIPTLKGDIPP-GCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKW- 113 (390)
Q Consensus 38 ~~iyv~GG~~~~~~~~~~~~d~~~~~--W~~~~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~- 113 (390)
+++++.|..+ ..+.++|..+++ |+.-. +. .......+..++++++.+. +.++.||+...
T Consensus 5 ~~~lv~~~~~----~~v~~~d~~tG~~~w~~~~-----~~~~~~~~~~~~pdG~ilvs~~--------~~V~~~d~~G~~ 67 (276)
T 3no2_A 5 QHLLVGGSGW----NKIAIINKDTKEIVWEYPL-----EKGWECNSVAATKAGEILFSYS--------KGAKMITRDGRE 67 (276)
T ss_dssp CEEEEECTTC----SEEEEEETTTTEEEEEEEC-----CTTCCCCEEEECTTSCEEEECB--------SEEEEECTTSCE
T ss_pred CcEEEeeCCC----CEEEEEECCCCeEEEEeCC-----CccCCCcCeEECCCCCEEEeCC--------CCEEEECCCCCE
Confidence 5666666533 558888987766 54422 11 1223333445677777321 34888998433
Q ss_pred eeEEecCCCCCCCCCCCCCccceEEEE-CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCC
Q psy1098 114 EWKRLKPKPPRFGSPPCPRLGHSFTLI-GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGL 192 (390)
Q Consensus 114 ~W~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~ 192 (390)
.|+.-.+ .....+++..+ ++.+++...... ..++.++.... ..|+..- ....
T Consensus 68 ~W~~~~~---------~~~~~~~~~~~~dG~~lv~~~~~~---------------~~v~~vd~~Gk--~l~~~~~-~~~~ 120 (276)
T 3no2_A 68 LWNIAAP---------AGCEMQTARILPDGNALVAWCGHP---------------STILEVNMKGE--VLSKTEF-ETGI 120 (276)
T ss_dssp EEEEECC---------TTCEEEEEEECTTSCEEEEEESTT---------------EEEEEECTTSC--EEEEEEE-CCSC
T ss_pred EEEEcCC---------CCccccccEECCCCCEEEEecCCC---------------CEEEEEeCCCC--EEEEEec-cCCC
Confidence 4654321 11122333333 566665533211 13666766431 2344311 1111
Q ss_pred CCCC-ceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCC-eEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcc
Q psy1098 193 PSPR-ESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSM-TWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWV 269 (390)
Q Consensus 193 p~~r-~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~-~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~ 269 (390)
+.+. ..+.+...+ ++.+++....+ ..+..||++.. .|+.- .. .. .+++..+ ++.+++.+..
T Consensus 121 ~~~~~~~~~v~~~~----~G~~lv~~~~~----~~v~~~d~~G~~~w~~~---~~-~~---~~~~~~~~~g~~~v~~~~- 184 (276)
T 3no2_A 121 ERPHAQFRQINKNK----KGNYLVPLFAT----SEVREIAPNGQLLNSVK---LS-GT---PFSSAFLDNGDCLVACGD- 184 (276)
T ss_dssp SSGGGSCSCCEECT----TSCEEEEETTT----TEEEEECTTSCEEEEEE---CS-SC---CCEEEECTTSCEEEECBT-
T ss_pred CcccccccCceECC----CCCEEEEecCC----CEEEEECCCCCEEEEEE---CC-CC---ccceeEcCCCCEEEEeCC-
Confidence 1110 011122221 56666654332 46889998732 36652 11 11 1233334 6778887653
Q ss_pred cCCCccccccccccceecCceEEeecCCCe--eeecccccccCCCCCCCC--Ccceeee-CCEEEEEe
Q psy1098 270 PILKDESRSLHEKEWKCSNQLACLHLPEMT--WEDLSVEVTDDFLPKPRA--GHCASVI-NSRMYIWS 332 (390)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--W~~v~~~~~~~~~p~~r~--~~~~~~~-~~~l~v~G 332 (390)
-..+..+|+.+.+ |+.-... ++..+. -.+++.+ ++.+|+..
T Consensus 185 -----------------~~~v~~~d~~tG~~~w~~~~~~-----~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 185 -----------------AHCFVQLNLESNRIVRRVNAND-----IEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp -----------------TSEEEEECTTTCCEEEEEEGGG-----SBSCCCSEEEEEEECTTSCEEEEE
T ss_pred -----------------CCeEEEEeCcCCcEEEEecCCC-----CCCccccccccceEcCCCCEEEEe
Confidence 2468999998553 7654321 222222 1233333 78888876
No 65
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.37 E-value=1.2 Score=40.22 Aligned_cols=25 Identities=12% Similarity=0.162 Sum_probs=16.7
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEee
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQK 239 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~ 239 (390)
++ +++.++.+ ..+.+||+.+.+-..
T Consensus 300 ~~-~l~~~~~d----~~i~i~d~~~~~~~~ 324 (425)
T 1r5m_A 300 DD-KVISCSMD----GSVRLWSLKQNTLLA 324 (425)
T ss_dssp TT-EEEEEETT----SEEEEEETTTTEEEE
T ss_pred CC-EEEEEeCC----CcEEEEECCCCcEeE
Confidence 45 66677655 468899988765433
No 66
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.35 E-value=1 Score=40.37 Aligned_cols=23 Identities=13% Similarity=0.465 Sum_probs=15.6
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCe
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMT 236 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~ 236 (390)
++++++.|+.+ ..|.+||+.+.+
T Consensus 226 ~~~~l~sg~~d----g~v~~wd~~~~~ 248 (344)
T 4gqb_B 226 QSEVFVFGDEN----GTVSLVDTKSTS 248 (344)
T ss_dssp CTTEEEEEETT----SEEEEEESCC--
T ss_pred CCcceEEeccC----CcEEEEECCCCc
Confidence 56788888765 357888887653
No 67
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.27 E-value=1.5 Score=39.62 Aligned_cols=93 Identities=17% Similarity=0.080 Sum_probs=47.6
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
++++++.|+.+ ..+.+||+.+.+-.... . .....-.+++.. ++ +++.|+. -.
T Consensus 258 ~~~~l~~~~~d----~~i~i~d~~~~~~~~~~--~--~~~~~i~~~~~~~~~-~l~~~~~------------------d~ 310 (425)
T 1r5m_A 258 TNKLLLSASDD----GTLRIWHGGNGNSQNCF--Y--GHSQSIVSASWVGDD-KVISCSM------------------DG 310 (425)
T ss_dssp TTTEEEEEETT----SCEEEECSSSBSCSEEE--C--CCSSCEEEEEEETTT-EEEEEET------------------TS
T ss_pred CCCEEEEEcCC----CEEEEEECCCCccceEe--c--CCCccEEEEEECCCC-EEEEEeC------------------CC
Confidence 55577777655 45888888765422211 0 111122333334 44 6666654 35
Q ss_pred ceEEeecCCCeeeecccccccCCCCCCCCCcceeee--CCEEEEEeccCCc
Q psy1098 289 QLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVI--NSRMYIWSGRDDY 337 (390)
Q Consensus 289 ~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~ 337 (390)
.+.+||+.+.+-...-. . ......++.+ ++++++.|+.++.
T Consensus 311 ~i~i~d~~~~~~~~~~~------~--~~~~i~~~~~s~~~~~l~~~~~dg~ 353 (425)
T 1r5m_A 311 SVRLWSLKQNTLLALSI------V--DGVPIFAGRISQDGQKYAVAFMDGQ 353 (425)
T ss_dssp EEEEEETTTTEEEEEEE------C--TTCCEEEEEECTTSSEEEEEETTSC
T ss_pred cEEEEECCCCcEeEecc------c--CCccEEEEEEcCCCCEEEEEECCCe
Confidence 78889987765332221 1 1111122222 5677788877643
No 68
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.26 E-value=1.3 Score=38.33 Aligned_cols=74 Identities=11% Similarity=0.041 Sum_probs=40.0
Q ss_pred CCEEEEEcc---CCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEe-C-CEEEEEcceeCCceeecceEEEEcC
Q psy1098 37 KDLMLVFGG---GNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVD-N-TRVLIFGGMVEYGKYSSDLYELQAS 111 (390)
Q Consensus 37 ~~~iyv~GG---~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~v~~~d~~ 111 (390)
++.+|+... ........+++||+.++++..+...........-++++.. + ++||+.... +.+++||+.
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-------~~l~~~d~~ 100 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-------LGLLVVQTD 100 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-------TEEEEEETT
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-------CCEEEEeCC
Confidence 567888711 0011234689999988888765420000011112333333 4 688886532 248889988
Q ss_pred cceeEEe
Q psy1098 112 KWEWKRL 118 (390)
Q Consensus 112 ~~~W~~~ 118 (390)
.+...+
T Consensus 101 -g~~~~~ 106 (314)
T 1pjx_A 101 -GTFEEI 106 (314)
T ss_dssp -SCEEEC
T ss_pred -CCEEEE
Confidence 666554
No 69
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.12 E-value=0.51 Score=47.49 Aligned_cols=191 Identities=8% Similarity=-0.044 Sum_probs=89.4
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcceeE
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKWEWK 116 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~ 116 (390)
++..++.|+.+ ..+.+||..++....... ............-+++.++.|+.+ ..+.+||..+.+..
T Consensus 24 ~~~~la~~~~~----g~v~iwd~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~~~~ 90 (814)
T 3mkq_A 24 TEPWVLTTLYS----GRVEIWNYETQVEVRSIQ---VTETPVRAGKFIARKNWIIVGSDD------FRIRVFNYNTGEKV 90 (814)
T ss_dssp SSSEEEEEETT----SEEEEEETTTTEEEEEEE---CCSSCEEEEEEEGGGTEEEEEETT------SEEEEEETTTCCEE
T ss_pred CCCEEEEEeCC----CEEEEEECCCCceEEEEe---cCCCcEEEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEE
Confidence 34556666532 458889987776543221 111111111222344566666642 34778888776543
Q ss_pred EecCCCCCCCCCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCC
Q psy1098 117 RLKPKPPRFGSPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPS 194 (390)
Q Consensus 117 ~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~ 194 (390)
..-.. .. ..-.++.+ ++..++.|+.+. .+..+++.+.. ..... ......
T Consensus 91 ~~~~~--------~~-~~v~~~~~s~~~~~l~~~~~dg----------------~i~vw~~~~~~--~~~~~--~~~~~~ 141 (814)
T 3mkq_A 91 VDFEA--------HP-DYIRSIAVHPTKPYVLSGSDDL----------------TVKLWNWENNW--ALEQT--FEGHEH 141 (814)
T ss_dssp EEEEC--------CS-SCEEEEEECSSSSEEEEEETTS----------------EEEEEEGGGTS--EEEEE--EECCSS
T ss_pred EEEec--------CC-CCEEEEEEeCCCCEEEEEcCCC----------------EEEEEECCCCc--eEEEE--EcCCCC
Confidence 32210 11 11222222 455556666443 26667765421 11111 111111
Q ss_pred CCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE---CCEEEEEcCcccC
Q psy1098 195 PRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI---GDRMFIFGGWVPI 271 (390)
Q Consensus 195 ~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~---~~~i~i~GG~~~~ 271 (390)
.-.++...+. ++..++.|+.+ ..+.+||+.+..-.... .... ...-..++.. ++.+++.|+.
T Consensus 142 --~v~~~~~~p~---~~~~l~~~~~d----g~v~vwd~~~~~~~~~~-~~~~--~~~v~~~~~~~~~~~~~l~~~~~--- 206 (814)
T 3mkq_A 142 --FVMCVAFNPK---DPSTFASGCLD----RTVKVWSLGQSTPNFTL-TTGQ--ERGVNYVDYYPLPDKPYMITASD--- 206 (814)
T ss_dssp --CEEEEEEETT---EEEEEEEEETT----SEEEEEETTCSSCSEEE-ECCC--TTCCCEEEECCSTTCCEEEEECT---
T ss_pred --cEEEEEEEcC---CCCEEEEEeCC----CeEEEEECCCCcceeEE-ecCC--CCCEEEEEEEECCCCCEEEEEeC---
Confidence 1122333321 45677777765 46888888654322211 1111 1111122222 5667777775
Q ss_pred CCccccccccccceecCceEEeecCCCe
Q psy1098 272 LKDESRSLHEKEWKCSNQLACLHLPEMT 299 (390)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 299 (390)
-..+.+||+.+.+
T Consensus 207 ---------------dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 207 ---------------DLTIKIWDYQTKS 219 (814)
T ss_dssp ---------------TSEEEEEETTTTE
T ss_pred ---------------CCEEEEEECCCCc
Confidence 3568888887665
No 70
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.11 E-value=1.5 Score=38.37 Aligned_cols=71 Identities=11% Similarity=0.018 Sum_probs=35.7
Q ss_pred CEEEEEccCCCCcccceEEEECCCCcE-EeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcceeE
Q psy1098 38 DLMLVFGGGNEGIVEELHVFNTATNQW-FIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKWEWK 116 (390)
Q Consensus 38 ~~iyv~GG~~~~~~~~~~~~d~~~~~W-~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~ 116 (390)
+.+|+.+... ..++.+|+.+.+. ......+. .++...++...++.+| .+.... -...++++|..+.+..
T Consensus 52 ~~l~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~-~~~~~~---~~~~i~v~d~~~~~~~ 121 (331)
T 3u4y_A 52 SNVVVTSDFC----QTLVQIETQLEPPKVVAIQEGQ--SSMADVDITPDDQFAV-TVTGLN---HPFNMQSYSFLKNKFI 121 (331)
T ss_dssp CEEEEEESTT----CEEEEEECSSSSCEEEEEEECS--SCCCCEEECTTSSEEE-ECCCSS---SSCEEEEEETTTTEEE
T ss_pred CEEEEEeCCC----CeEEEEECCCCceeEEecccCC--CCccceEECCCCCEEE-EecCCC---CcccEEEEECCCCCeE
Confidence 3466666522 3789999988774 22221111 2221122222344566 332210 0125889999887654
Q ss_pred Ee
Q psy1098 117 RL 118 (390)
Q Consensus 117 ~~ 118 (390)
..
T Consensus 122 ~~ 123 (331)
T 3u4y_A 122 ST 123 (331)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 71
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.10 E-value=2.1 Score=39.64 Aligned_cols=94 Identities=10% Similarity=0.069 Sum_probs=50.5
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
++.+++.|+.+ ..+.+||+.+.+-.... .. ....-.+++.. ++..++.|+. -.
T Consensus 279 ~~~~l~~~~~d----~~i~vwd~~~~~~~~~~---~~-~~~~v~~~~~~~~~~~l~sg~~------------------dg 332 (464)
T 3v7d_B 279 HGNIVVSGSYD----NTLIVWDVAQMKCLYIL---SG-HTDRIYSTIYDHERKRCISASM------------------DT 332 (464)
T ss_dssp ETTEEEEEETT----SCEEEEETTTTEEEEEE---CC-CSSCEEEEEEETTTTEEEEEET------------------TS
T ss_pred CCCEEEEEeCC----CeEEEEECCCCcEEEEe---cC-CCCCEEEEEEcCCCCEEEEEeC------------------CC
Confidence 45567777665 46889998876543311 11 11112223333 5567777764 35
Q ss_pred ceEEeecCCCeeeecccccccCCCCCCCCCcceeeeCCEEEEEeccCCc
Q psy1098 289 QLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVINSRMYIWSGRDDY 337 (390)
Q Consensus 289 ~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~ 337 (390)
.+.+||+.+.+-.. . +......-.++.+.++.++.|+.++.
T Consensus 333 ~i~vwd~~~~~~~~--~------~~~h~~~v~~~~~~~~~l~s~s~dg~ 373 (464)
T 3v7d_B 333 TIRIWDLENGELMY--T------LQGHTALVGLLRLSDKFLVSAAADGS 373 (464)
T ss_dssp CEEEEETTTTEEEE--E------ECCCSSCEEEEEECSSEEEEEETTSE
T ss_pred cEEEEECCCCcEEE--E------EeCCCCcEEEEEEcCCEEEEEeCCCc
Confidence 68889987765222 1 11112222344456677777777654
No 72
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.08 E-value=1.7 Score=38.52 Aligned_cols=65 Identities=9% Similarity=-0.027 Sum_probs=36.8
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE--CCEEEEEcCcccCCCccccccccccceec
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI--GDRMFIFGGWVPILKDESRSLHEKEWKCS 287 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~ 287 (390)
+++.++.|+.+ ..+.+||+.+.+-.... ..+.......++.. ++++++.|+. -
T Consensus 237 ~~~~l~s~s~d----~~v~iwd~~~~~~~~~~---~~~~~~~~v~~~~~s~~g~~l~~g~~------------------d 291 (340)
T 1got_B 237 NGNAFATGSDD----ATCRLFDLRADQELMTY---SHDNIICGITSVSFSKSGRLLLAGYD------------------D 291 (340)
T ss_dssp TSSEEEEEETT----SCEEEEETTTTEEEEEE---CCTTCCSCEEEEEECTTSSEEEEEET------------------T
T ss_pred CCCEEEEEcCC----CcEEEEECCCCcEEEEE---ccCCcccceEEEEECCCCCEEEEECC------------------C
Confidence 66778888776 46888998876532211 11111111222222 5677777764 3
Q ss_pred CceEEeecCCCe
Q psy1098 288 NQLACLHLPEMT 299 (390)
Q Consensus 288 ~~~~~~d~~~~~ 299 (390)
..+.+||..+..
T Consensus 292 ~~i~vwd~~~~~ 303 (340)
T 1got_B 292 FNCNVWDALKAD 303 (340)
T ss_dssp SEEEEEETTTCC
T ss_pred CeEEEEEcccCc
Confidence 468888876543
No 73
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.08 E-value=1.2 Score=39.94 Aligned_cols=93 Identities=8% Similarity=0.000 Sum_probs=47.4
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-C-CEEEEEcCcccCCCccccccccccceec
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-G-DRMFIFGGWVPILKDESRSLHEKEWKCS 287 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~-~~i~i~GG~~~~~~~~~~~~~~~~~~~~ 287 (390)
++.+++.|+.+ ..+.+||+.+.+-.. ..... ...-.+++.. + +++++.|+. -
T Consensus 238 ~~~~la~g~~d----~~i~~wd~~~~~~~~--~~~~~--~~~v~~l~~sp~~~~~lasgs~------------------D 291 (357)
T 4g56_B 238 KDDTFACGDET----GNVSLVNIKNPDSAQ--TSAVH--SQNITGLAYSYHSSPFLASISE------------------D 291 (357)
T ss_dssp STTEEEEEESS----SCEEEEESSCGGGCE--EECCC--SSCEEEEEECSSSSCCEEEEET------------------T
T ss_pred ccceEEEeecc----cceeEEECCCCcEeE--EEecc--ceeEEEEEEcCCCCCEEEEEeC------------------C
Confidence 46677787765 458888887653221 01111 1111122222 3 356666664 2
Q ss_pred CceEEeecCCCeeeecccccccCCCCCCCCCcceee---eCCEEEEEeccCCc
Q psy1098 288 NQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASV---INSRMYIWSGRDDY 337 (390)
Q Consensus 288 ~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~---~~~~l~v~GG~~~~ 337 (390)
..+.++|..+.+-... +... ..-.++. .++++++.||.++.
T Consensus 292 ~~i~iwd~~~~~~~~~--------~~H~-~~V~~vafsP~d~~~l~s~s~Dg~ 335 (357)
T 4g56_B 292 CTVAVLDADFSEVFRD--------LSHR-DFVTGVAWSPLDHSKFTTVGWDHK 335 (357)
T ss_dssp SCEEEECTTSCEEEEE--------CCCS-SCEEEEEECSSSTTEEEEEETTSC
T ss_pred CEEEEEECCCCcEeEE--------CCCC-CCEEEEEEeCCCCCEEEEEcCCCe
Confidence 4688889887653322 1111 1112222 25778888888754
No 74
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.08 E-value=0.96 Score=40.25 Aligned_cols=21 Identities=5% Similarity=0.202 Sum_probs=15.0
Q ss_pred cEEEEEcCCCCCccCcEEEEecCCC
Q psy1098 211 TKLIIYGGMSGNRLSDLFMLDINSM 235 (390)
Q Consensus 211 ~~i~v~GG~~~~~~~~v~~~d~~~~ 235 (390)
+.+++.|+.+ ..+.+||+.+.
T Consensus 115 ~~~l~~~~~d----~~i~v~d~~~~ 135 (379)
T 3jrp_A 115 GPLLLVASSD----GKVSVVEFKEN 135 (379)
T ss_dssp CSEEEEEETT----SEEEEEECCTT
T ss_pred CCEEEEecCC----CcEEEEecCCC
Confidence 5677777765 46788888765
No 75
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.06 E-value=1.7 Score=38.33 Aligned_cols=94 Identities=10% Similarity=0.168 Sum_probs=50.7
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
+++.++.|+.+ ..+.+||+.+.+-...- .+ ...+ -.+++.. ++++++.|+. -.
T Consensus 175 dg~~lasg~~d----g~i~iwd~~~~~~~~~~-~~-h~~~--v~~l~~spd~~~l~s~s~------------------dg 228 (321)
T 3ow8_A 175 DGKYLASGAID----GIINIFDIATGKLLHTL-EG-HAMP--IRSLTFSPDSQLLVTASD------------------DG 228 (321)
T ss_dssp TSSEEEEEETT----SCEEEEETTTTEEEEEE-CC-CSSC--CCEEEECTTSCEEEEECT------------------TS
T ss_pred CCCEEEEEcCC----CeEEEEECCCCcEEEEE-cc-cCCc--eeEEEEcCCCCEEEEEcC------------------CC
Confidence 67788888776 46889999877543311 11 1111 1122222 5677788775 34
Q ss_pred ceEEeecCCCeeeecccccccCCCCCCCCCcceeee--CCEEEEEeccCCc
Q psy1098 289 QLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVI--NSRMYIWSGRDDY 337 (390)
Q Consensus 289 ~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~ 337 (390)
.+.+||+.+...... +......-.++.+ ++++++.|+.++.
T Consensus 229 ~i~iwd~~~~~~~~~--------~~~h~~~v~~~~~sp~~~~l~s~s~D~~ 271 (321)
T 3ow8_A 229 YIKIYDVQHANLAGT--------LSGHASWVLNVAFCPDDTHFVSSSSDKS 271 (321)
T ss_dssp CEEEEETTTCCEEEE--------ECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eEEEEECCCcceeEE--------EcCCCCceEEEEECCCCCEEEEEeCCCc
Confidence 678888876553221 1111111122222 5677888887754
No 76
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.99 E-value=3.1 Score=41.12 Aligned_cols=126 Identities=15% Similarity=0.164 Sum_probs=70.0
Q ss_pred eeeEEeCCEEEEEccCCCCcccceEEEECCCCc--EEeeeecCCC--CC---CCceeeEEEeCCEEEEEcceeCCceeec
Q psy1098 31 HRAVAIKDLMLVFGGGNEGIVEELHVFNTATNQ--WFIPTLKGDI--PP---GCAAYGIVVDNTRVLIFGGMVEYGKYSS 103 (390)
Q Consensus 31 ~~~~~~~~~iyv~GG~~~~~~~~~~~~d~~~~~--W~~~~~~~~~--p~---~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 103 (390)
.+-++.++.||+... ...++.+|..+++ |+.-...... +. .....+.+..+++||+.... .
T Consensus 71 ~~P~v~~g~vyv~~~-----~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d-------g 138 (677)
T 1kb0_A 71 ATPVVVDGIMYVSAS-----WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD-------G 138 (677)
T ss_dssp CCCEEETTEEEEECG-----GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT-------S
T ss_pred eCCEEECCEEEEECC-----CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC-------C
Confidence 344667899998876 3568999988776 7653311000 00 01123455678888885421 3
Q ss_pred ceEEEEcCcc--eeEEecC-CCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCce
Q psy1098 104 DLYELQASKW--EWKRLKP-KPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHT 180 (390)
Q Consensus 104 ~v~~~d~~~~--~W~~~~~-~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 180 (390)
.++.+|..+. .|+.-.. .. ........+-+..++.+|+..+.... .....++.||..+..
T Consensus 139 ~l~alD~~tG~~~W~~~~~~~~-----~~~~~~~~~p~v~~~~v~v~~~~~~~-----------~~~g~v~a~D~~tG~- 201 (677)
T 1kb0_A 139 RLIALDAATGKEVWHQNTFEGQ-----KGSLTITGAPRVFKGKVIIGNGGAEY-----------GVRGYITAYDAETGE- 201 (677)
T ss_dssp EEEEEETTTCCEEEEEETTTTC-----CSSCBCCSCCEEETTEEEECCBCTTT-----------CCBCEEEEEETTTCC-
T ss_pred EEEEEECCCCCEEeeecCCcCc-----CcCcccccCcEEECCEEEEEeccccc-----------CCCCEEEEEECCCCc-
Confidence 5889998765 5876432 10 00111222334557888774332111 223458889988764
Q ss_pred eeeec
Q psy1098 181 TVWDM 185 (390)
Q Consensus 181 ~~W~~ 185 (390)
..|+.
T Consensus 202 ~~W~~ 206 (677)
T 1kb0_A 202 RKWRW 206 (677)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 46876
No 77
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=94.89 E-value=1.3 Score=38.49 Aligned_cols=65 Identities=9% Similarity=0.008 Sum_probs=32.5
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcce
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKWE 114 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~ 114 (390)
++.+++.|+.+ ..+.++|..+..-..... .............++++++.|+.+ ..+.++|..+.+
T Consensus 24 ~~~~l~s~~~d----g~v~lWd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~s~d------~~i~vwd~~~~~ 88 (304)
T 2ynn_A 24 TEPWVLTTLYS----GRVELWNYETQVEVRSIQ---VTETPVRAGKFIARKNWIIVGSDD------FRIRVFNYNTGE 88 (304)
T ss_dssp SSSEEEEEETT----SEEEEEETTTTEEEEEEE---CCSSCEEEEEEEGGGTEEEEEETT------SEEEEEETTTCC
T ss_pred CCCEEEEEcCC----CcEEEEECCCCceeEEee---ccCCcEEEEEEeCCCCEEEEECCC------CEEEEEECCCCc
Confidence 45566666633 357788887765432221 111111111223344566666653 336778877654
No 78
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.72 E-value=1.5 Score=44.06 Aligned_cols=96 Identities=5% Similarity=0.044 Sum_probs=49.8
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCce-eeEEE-eC--CEEEEEcceeCCceeecceEEEEcCc
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAA-YGIVV-DN--TRVLIFGGMVEYGKYSSDLYELQASK 112 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~-~~~~~-~~--~~iyv~GG~~~~~~~~~~v~~~d~~~ 112 (390)
++..++.|+.+ ..+.+||....++..+.. +...... .++.. .+ +.+++.|+.+ ..+.++|..+
T Consensus 20 dg~~latg~~d----g~I~vwd~~~~~~~~~~~---l~~h~~~V~~l~~s~~~~~~~l~s~s~D------g~I~vwd~~~ 86 (753)
T 3jro_A 20 YGKRLATCSSD----KTIKIFEVEGETHKLIDT---LTGHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEEN 86 (753)
T ss_dssp SSCCEEEEETT----TEEEEEEEETTEEEEEEE---ECCCSSCEEEEEECCTTSCSEEEEEETT------SCEEEEEEET
T ss_pred CCCeEEEEECC----CcEEEEecCCCCCcccee---ccCCcCceEEEEecCCCCCCEEEEEeCC------CeEEEEECCC
Confidence 34556666633 357788887777766542 2211111 22222 22 5666777653 3377788888
Q ss_pred ceeEEecCCCCCCCCCCCCCccceEEEE--C--CEEEEEcCccC
Q psy1098 113 WEWKRLKPKPPRFGSPPCPRLGHSFTLI--G--NKVYLFGGLAN 152 (390)
Q Consensus 113 ~~W~~~~~~~~~~~~~p~~r~~~~~~~~--~--~~l~v~GG~~~ 152 (390)
.++..+.... .......++.+ + +.+++.|+.++
T Consensus 87 ~~~~~~~~~~-------~h~~~V~~v~~sp~~~~~~l~sgs~dg 123 (753)
T 3jro_A 87 GRWSQIAVHA-------VHSASVNSVQWAPHEYGPLLLVASSDG 123 (753)
T ss_dssp TEEEEEEEEC-------CCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred Cccccccccc-------CCCCCeEEEEECCCCCCCEEEEEeCCC
Confidence 7765554321 11122223333 3 56777777654
No 79
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.71 E-value=2.1 Score=37.85 Aligned_cols=96 Identities=13% Similarity=0.121 Sum_probs=50.9
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
++++++.|+.+ ..+.+||+.+..-...- .+ ....-.+++.. ++.+++.|+. -.
T Consensus 195 ~~~~l~sg~~d----~~v~~wd~~~~~~~~~~-~~---h~~~v~~v~~~p~~~~l~s~s~------------------d~ 248 (340)
T 1got_B 195 DTRLFVSGACD----ASAKLWDVREGMCRQTF-TG---HESDINAICFFPNGNAFATGSD------------------DA 248 (340)
T ss_dssp TSSEEEEEETT----SCEEEEETTTCSEEEEE-CC---CSSCEEEEEECTTSSEEEEEET------------------TS
T ss_pred CCCEEEEEeCC----CcEEEEECCCCeeEEEE-cC---CcCCEEEEEEcCCCCEEEEEcC------------------CC
Confidence 66788888876 46888898765433211 01 11111122222 5677777775 34
Q ss_pred ceEEeecCCCeeeecccccccCCCCCCCCCcceeee--CCEEEEEeccCCc
Q psy1098 289 QLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVI--NSRMYIWSGRDDY 337 (390)
Q Consensus 289 ~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~ 337 (390)
.+.+||+.+.+-...-. .+.......++.+ ++++++.|+.++.
T Consensus 249 ~v~iwd~~~~~~~~~~~------~~~~~~~v~~~~~s~~g~~l~~g~~d~~ 293 (340)
T 1got_B 249 TCRLFDLRADQELMTYS------HDNIICGITSVSFSKSGRLLLAGYDDFN 293 (340)
T ss_dssp CEEEEETTTTEEEEEEC------CTTCCSCEEEEEECTTSSEEEEEETTSE
T ss_pred cEEEEECCCCcEEEEEc------cCCcccceEEEEECCCCCEEEEECCCCe
Confidence 67888887664221111 1111122233333 5778888887754
No 80
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=94.70 E-value=2.2 Score=37.97 Aligned_cols=76 Identities=13% Similarity=0.133 Sum_probs=34.7
Q ss_pred EEEEccCCCCccc--ceEEEECCCCcEEeeeecCCCCCCCceeeEEEe-CCEEEEEcceeCCceeecceEEEEcCcceeE
Q psy1098 40 MLVFGGGNEGIVE--ELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVD-NTRVLIFGGMVEYGKYSSDLYELQASKWEWK 116 (390)
Q Consensus 40 iyv~GG~~~~~~~--~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~ 116 (390)
.+++|........ .++.+|..+.+.+.+... .... ..+....- +..||+.+.... ..-.-.+|.++..+.+.+
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~--p~~l~~spdg~~l~~~~~~~~-~~~~v~~~~~~~~~g~~~ 90 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVAN--PSYLIPSADGKFVYSVNEFSK-DQAAVSAFAFDKEKGTLH 90 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSC--CCSEEECTTSSEEEEEECCSS-TTCEEEEEEEETTTTEEE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCC--CceEEECCCCCEEEEEEccCC-CCCcEEEEEEeCCCCcEE
Confidence 4455654433333 355557788888776632 1111 11112222 345666554311 111123456666555555
Q ss_pred Eec
Q psy1098 117 RLK 119 (390)
Q Consensus 117 ~~~ 119 (390)
.+.
T Consensus 91 ~~~ 93 (361)
T 3scy_A 91 LLN 93 (361)
T ss_dssp EEE
T ss_pred Eee
Confidence 544
No 81
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.68 E-value=2.1 Score=37.70 Aligned_cols=66 Identities=12% Similarity=0.097 Sum_probs=36.6
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCC-CeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceec
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINS-MTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCS 287 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~-~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~ 287 (390)
+++.++.|+.+ ..+.+||+.+ ..-..... . ....-.+++.. ++.+++.|+. -
T Consensus 186 ~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~--~--~~~~v~~~~~~~~~~~l~~~~~------------------d 239 (369)
T 3zwl_B 186 KGKYIIAGHKD----GKISKYDVSNNYEYVDSID--L--HEKSISDMQFSPDLTYFITSSR------------------D 239 (369)
T ss_dssp GGCEEEEEETT----SEEEEEETTTTTEEEEEEE--C--CSSCEEEEEECTTSSEEEEEET------------------T
T ss_pred CCCEEEEEcCC----CEEEEEECCCCcEeEEEEe--c--CCCceeEEEECCCCCEEEEecC------------------C
Confidence 56677777665 4688999887 33222110 0 11111222222 5667777764 3
Q ss_pred CceEEeecCCCeee
Q psy1098 288 NQLACLHLPEMTWE 301 (390)
Q Consensus 288 ~~~~~~d~~~~~W~ 301 (390)
..+.+||+.+.+-.
T Consensus 240 ~~i~v~d~~~~~~~ 253 (369)
T 3zwl_B 240 TNSFLVDVSTLQVL 253 (369)
T ss_dssp SEEEEEETTTCCEE
T ss_pred ceEEEEECCCCcee
Confidence 57888998776533
No 82
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.59 E-value=2.1 Score=37.17 Aligned_cols=66 Identities=9% Similarity=0.013 Sum_probs=39.5
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEE-eCCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVV-DNTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
++.+|+.... ...+++||+.+.....+. .+. +. .+++. -++++++.. ...+++||+.+.++
T Consensus 24 ~~~l~~~d~~----~~~i~~~d~~~~~~~~~~----~~~-~~-~~i~~~~dG~l~v~~--------~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 24 SNSLLFVDIP----AKKVCRWDSFTKQVQRVT----MDA-PV-SSVALRQSGGYVATI--------GTKFCALNWKEQSA 85 (297)
T ss_dssp TTEEEEEETT----TTEEEEEETTTCCEEEEE----CSS-CE-EEEEEBTTSSEEEEE--------TTEEEEEETTTTEE
T ss_pred CCEEEEEECC----CCEEEEEECCCCcEEEEe----CCC-ce-EEEEECCCCCEEEEE--------CCeEEEEECCCCcE
Confidence 3678877653 246899999887765443 121 11 22332 345565532 13588999998887
Q ss_pred EEecC
Q psy1098 116 KRLKP 120 (390)
Q Consensus 116 ~~~~~ 120 (390)
+.+..
T Consensus 86 ~~~~~ 90 (297)
T 3g4e_A 86 VVLAT 90 (297)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 76654
No 83
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.49 E-value=3.7 Score=39.65 Aligned_cols=127 Identities=15% Similarity=0.167 Sum_probs=68.6
Q ss_pred eeeEEeCCEEEEEccCCCCcccceEEEEC-CCCc--EEeeeecCC--CCCC---CceeeEEEeCCEEEEEcceeCCceee
Q psy1098 31 HRAVAIKDLMLVFGGGNEGIVEELHVFNT-ATNQ--WFIPTLKGD--IPPG---CAAYGIVVDNTRVLIFGGMVEYGKYS 102 (390)
Q Consensus 31 ~~~~~~~~~iyv~GG~~~~~~~~~~~~d~-~~~~--W~~~~~~~~--~p~~---r~~~~~~~~~~~iyv~GG~~~~~~~~ 102 (390)
.+-++.++.||+.... ...++.+|. .+++ |+.-..... .+.. ....+.+..+++||+....
T Consensus 56 ~~P~v~~g~vyv~~~~----~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d------- 124 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAF----PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN------- 124 (571)
T ss_dssp SCCEEETTEEEEECST----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT-------
T ss_pred cccEEECCEEEEEeCC----CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCC-------
Confidence 3455678999987652 346899998 7665 765321100 0000 1122345678888886431
Q ss_pred cceEEEEcCcc--eeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCce
Q psy1098 103 SDLYELQASKW--EWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHT 180 (390)
Q Consensus 103 ~~v~~~d~~~~--~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 180 (390)
..++.+|..+. .|+.-.... ........+-+..++.+|+-.+.... .....++.||..+.+
T Consensus 125 g~l~alD~~tG~~~W~~~~~~~-----~~~~~~~~~P~v~~g~v~vg~~~~~~-----------~~~g~v~a~D~~tG~- 187 (571)
T 2ad6_A 125 GHLLALDAKTGKINWEVEVCDP-----KVGSTLTQAPFVAKDTVLMGCSGAEL-----------GVRGAVNAFDLKTGE- 187 (571)
T ss_dssp SEEEEEETTTCCEEEEEECCCG-----GGTCBCCSCCEEETTEEEEECBCGGG-----------TCCCEEEEEETTTCC-
T ss_pred CEEEEEECCCCCEEEEecCCCC-----CccceeccCCEEECCEEEEEecCCcc-----------CCCCEEEEEECCCCc-
Confidence 34889998765 587532210 00001122334457888774332110 122358888887753
Q ss_pred eeeec
Q psy1098 181 TVWDM 185 (390)
Q Consensus 181 ~~W~~ 185 (390)
..|+.
T Consensus 188 ~~W~~ 192 (571)
T 2ad6_A 188 LKWRA 192 (571)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 46865
No 84
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=94.39 E-value=2.1 Score=36.54 Aligned_cols=222 Identities=7% Similarity=0.017 Sum_probs=106.0
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCC-CCceeeEEE--eCCEEEEEcceeCCceeecceEEEEcCcc
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPP-GCAAYGIVV--DNTRVLIFGGMVEYGKYSSDLYELQASKW 113 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~-~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~~d~~~~ 113 (390)
++.+|+.... ...+.+||+.......+...+..+. ...-..++. .+++||+.+... ...+.+||....
T Consensus 40 ~g~l~v~~~~----~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~-----~~~i~~~d~~g~ 110 (286)
T 1q7f_A 40 QNDIIVADTN----NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP-----THQIQIYNQYGQ 110 (286)
T ss_dssp TCCEEEEEGG----GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG-----GCEEEEECTTSC
T ss_pred CCCEEEEECC----CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC-----CCEEEEECCCCc
Confidence 4668887542 2458889987544333332111111 112234444 367888876321 134788886554
Q ss_pred eeEEecCCCCCCCCCCCCCccceEEEE-CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCC
Q psy1098 114 EWKRLKPKPPRFGSPPCPRLGHSFTLI-GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGL 192 (390)
Q Consensus 114 ~W~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~ 192 (390)
.-..+... ....-+.++.. ++++|+..... +.+++|+... .....+......
T Consensus 111 ~~~~~~~~--------~~~~~~~i~~~~~g~l~v~~~~~----------------~~i~~~~~~g---~~~~~~~~~~~~ 163 (286)
T 1q7f_A 111 FVRKFGAT--------ILQHPRGVTVDNKGRIIVVECKV----------------MRVIIFDQNG---NVLHKFGCSKHL 163 (286)
T ss_dssp EEEEECTT--------TCSCEEEEEECTTSCEEEEETTT----------------TEEEEECTTS---CEEEEEECTTTC
T ss_pred EEEEecCc--------cCCCceEEEEeCCCCEEEEECCC----------------CEEEEEcCCC---CEEEEeCCCCcc
Confidence 43333221 11111233332 56788764322 1377777643 222222111111
Q ss_pred CCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccC
Q psy1098 193 PSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPI 271 (390)
Q Consensus 193 p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~ 271 (390)
. .-..++..+ ++++|+....+ ..|.+||+.......+...+... .-.+++.- ++++|+....
T Consensus 164 ~---~p~~i~~~~----~g~l~v~~~~~----~~i~~~~~~g~~~~~~~~~g~~~---~p~~i~~d~~G~l~v~~~~--- 226 (286)
T 1q7f_A 164 E---FPNGVVVND----KQEIFISDNRA----HCVKVFNYEGQYLRQIGGEGITN---YPIGVGINSNGEILIADNH--- 226 (286)
T ss_dssp S---SEEEEEECS----SSEEEEEEGGG----TEEEEEETTCCEEEEESCTTTSC---SEEEEEECTTCCEEEEECS---
T ss_pred C---CcEEEEECC----CCCEEEEECCC----CEEEEEcCCCCEEEEEccCCccC---CCcEEEECCCCCEEEEeCC---
Confidence 1 112333332 67888876432 56899998765444432111111 11223332 5788887643
Q ss_pred CCccccccccccceecC-ceEEeecCCCeeeecccccccCCCCCCCCCcceee-eCCEEEEEe
Q psy1098 272 LKDESRSLHEKEWKCSN-QLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASV-INSRMYIWS 332 (390)
Q Consensus 272 ~~~~~~~~~~~~~~~~~-~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~-~~~~l~v~G 332 (390)
.. .+.+||+....-..+... .+... -.+++. -+++||+..
T Consensus 227 ---------------~~~~i~~~~~~g~~~~~~~~~-----~~~~~-~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 227 ---------------NNFNLTIFTQDGQLISALESK-----VKHAQ-CFDVALMDDGSVVLAS 268 (286)
T ss_dssp ---------------SSCEEEEECTTSCEEEEEEES-----SCCSC-EEEEEEETTTEEEEEE
T ss_pred ---------------CCEEEEEECCCCCEEEEEccc-----CCCCc-ceeEEECCCCcEEEEC
Confidence 23 788898766554444331 11111 112222 267888874
No 85
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.36 E-value=2.5 Score=37.07 Aligned_cols=67 Identities=12% Similarity=0.237 Sum_probs=38.0
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEE-e-CCEEEEEcceeCCceeecceEEEEcCcce
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVV-D-NTRVLIFGGMVEYGKYSSDLYELQASKWE 114 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~~ 114 (390)
++.+|+.++. ...++++|+.+.+...... .+.....+.++. - ++.+|+.+.. ...++++|+.+.+
T Consensus 10 ~~~~~v~~~~----~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~~~v~~~~------~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 10 GHEYMIVTNY----PNNLHVVDVASDTVYKSCV---MPDKFGPGTAMMAPDNRTAYVLNNH------YGDIYGIDLDTCK 76 (349)
T ss_dssp TCEEEEEEET----TTEEEEEETTTTEEEEEEE---CSSCCSSCEEEECTTSSEEEEEETT------TTEEEEEETTTTE
T ss_pred CCEEEEEeCC----CCeEEEEECCCCcEEEEEe---cCCCCCCceeEECCCCCEEEEEeCC------CCcEEEEeCCCCc
Confidence 5667777763 3568899998877543321 121001122322 2 3457776532 1458899998775
Q ss_pred eE
Q psy1098 115 WK 116 (390)
Q Consensus 115 W~ 116 (390)
-.
T Consensus 77 ~~ 78 (349)
T 1jmx_B 77 NT 78 (349)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 86
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=94.35 E-value=2.1 Score=36.23 Aligned_cols=148 Identities=14% Similarity=0.052 Sum_probs=70.8
Q ss_pred CcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCc-ceeEEecCCCCCCCC
Q psy1098 49 GIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASK-WEWKRLKPKPPRFGS 127 (390)
Q Consensus 49 ~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~-~~W~~~~~~~~~~~~ 127 (390)
.....++++|+.+++...+... +... ......-+++.+++++. ..++++|..+ .+...+....
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~---~~~v-~~~~~spdg~~l~~~~~-------~~i~~~d~~~~~~~~~~~~~~----- 82 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQT---PELF-EAPNWSPDGKYLLLNSE-------GLLYRLSLAGDPSPEKVDTGF----- 82 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEE---SSCC-EEEEECTTSSEEEEEET-------TEEEEEESSSCCSCEECCCTT-----
T ss_pred CcceeEEEEeCCCCceeeeccC---Ccce-EeeEECCCCCEEEEEcC-------CeEEEEeCCCCCCceEecccc-----
Confidence 3457799999988887655421 1111 11112234455555431 3588999988 6655544211
Q ss_pred CCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeecc
Q psy1098 128 PPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDE 207 (390)
Q Consensus 128 ~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~ 207 (390)
...........-+++.+++++... .....++.++..+. ....+.. .. . .......++
T Consensus 83 -~~~~~~~~~~spdg~~l~~~~~~~------------~~~~~l~~~~~~~~---~~~~~~~---~~-~--~~~~~~spd- 139 (297)
T 2ojh_A 83 -ATICNNDHGISPDGALYAISDKVE------------FGKSAIYLLPSTGG---TPRLMTK---NL-P--SYWHGWSPD- 139 (297)
T ss_dssp -CCCBCSCCEECTTSSEEEEEECTT------------TSSCEEEEEETTCC---CCEECCS---SS-S--EEEEEECTT-
T ss_pred -ccccccceEECCCCCEEEEEEeCC------------CCcceEEEEECCCC---ceEEeec---CC-C--ccceEECCC-
Confidence 011112222222555555555322 11235777877653 2222111 11 1 122233321
Q ss_pred CCCcEEEEEcCCCCCccCcEEEEecCCCeEee
Q psy1098 208 YKNTKLIIYGGMSGNRLSDLFMLDINSMTWQK 239 (390)
Q Consensus 208 ~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~ 239 (390)
+..|++.++.++. ..+|.+++.+.....
T Consensus 140 --g~~l~~~~~~~~~--~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 140 --GKSFTYCGIRDQV--FDIYSMDIDSGVETR 167 (297)
T ss_dssp --SSEEEEEEEETTE--EEEEEEETTTCCEEE
T ss_pred --CCEEEEEECCCCc--eEEEEEECCCCcceE
Confidence 3445545543322 357788887766655
No 87
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=94.30 E-value=1.2 Score=39.69 Aligned_cols=28 Identities=7% Similarity=0.134 Sum_probs=17.3
Q ss_pred CCEEEEEcceeCCceeecceEEEEcCcceeEEec
Q psy1098 86 NTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLK 119 (390)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~ 119 (390)
++++++.|+.. ..+.+||..+.++..+.
T Consensus 19 ~~~~l~~~~~d------~~v~i~~~~~~~~~~~~ 46 (372)
T 1k8k_C 19 DRTQIAICPNN------HEVHIYEKSGNKWVQVH 46 (372)
T ss_dssp TSSEEEEECSS------SEEEEEEEETTEEEEEE
T ss_pred CCCEEEEEeCC------CEEEEEeCCCCcEEeee
Confidence 44566666542 34778888877655444
No 88
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.25 E-value=4 Score=39.09 Aligned_cols=75 Identities=8% Similarity=0.123 Sum_probs=42.1
Q ss_pred CcE-EEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEEC-CEEEEEcCcccCCCccccccccccceec
Q psy1098 210 NTK-LIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIG-DRMFIFGGWVPILKDESRSLHEKEWKCS 287 (390)
Q Consensus 210 ~~~-i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~-~~i~i~GG~~~~~~~~~~~~~~~~~~~~ 287 (390)
+++ +|+.+..+ +.|.++|+.+.+-......+..|.+......+.-+ +.+|+.+... .
T Consensus 334 dg~~l~va~~~~----~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~-----------------d 392 (543)
T 1nir_A 334 SHRYFMTAANNS----NKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLG-----------------D 392 (543)
T ss_dssp TSCEEEEEEGGG----TEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSS-----------------S
T ss_pred CCCEEEEEecCC----CeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCC-----------------C
Confidence 444 55554322 57888999998765533344555543333322223 6777776421 2
Q ss_pred CceEEeecCC-----Ceeeeccc
Q psy1098 288 NQLACLHLPE-----MTWEDLSV 305 (390)
Q Consensus 288 ~~~~~~d~~~-----~~W~~v~~ 305 (390)
..|-++|..+ ..|+.+..
T Consensus 393 ~~V~v~d~~~~~~~~~~~~~v~~ 415 (543)
T 1nir_A 393 GSISLIGTDPKNHPQYAWKKVAE 415 (543)
T ss_dssp SEEEEEECCTTTCTTTBTSEEEE
T ss_pred ceEEEEEeCCCCCchhcCeEEEE
Confidence 4677777765 23777665
No 89
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.10 E-value=1.7 Score=40.16 Aligned_cols=98 Identities=10% Similarity=0.028 Sum_probs=47.4
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEE--eCCEEEEEcceeCCceeecceEEEEcCcce
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVV--DNTRVLIFGGMVEYGKYSSDLYELQASKWE 114 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~ 114 (390)
++.+++.|+.+. .+.+||..+..-..+.. .......=.+++. .++.+++.|+.+ ..|-++|..+..
T Consensus 131 ~~~~lasGs~dg----~i~lWd~~~~~~~~~~~--~~gH~~~V~~l~f~p~~~~~l~s~s~D------~~v~iwd~~~~~ 198 (435)
T 4e54_B 131 HPSTVAVGSKGG----DIMLWNFGIKDKPTFIK--GIGAGGSITGLKFNPLNTNQFYASSME------GTTRLQDFKGNI 198 (435)
T ss_dssp CTTCEEEEETTS----CEEEECSSCCSCCEEEC--CCSSSCCCCEEEECSSCTTEEEEECSS------SCEEEEETTSCE
T ss_pred CCCEEEEEeCCC----EEEEEECCCCCceeEEE--ccCCCCCEEEEEEeCCCCCEEEEEeCC------CEEEEeeccCCc
Confidence 345777777433 47888887665433221 0111111122222 245566667653 236677887766
Q ss_pred eEEecCCCCCCCCCCCCCccceEEE-ECCEEEEEcCccC
Q psy1098 115 WKRLKPKPPRFGSPPCPRLGHSFTL-IGNKVYLFGGLAN 152 (390)
Q Consensus 115 W~~~~~~~~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~ 152 (390)
...+.... .......++.. -++.+++.|+.++
T Consensus 199 ~~~~~~~~------~~~~~~~~~~~~~~~~~l~~g~~dg 231 (435)
T 4e54_B 199 LRVFASSD------TINIWFCSLDVSASSRMVVTGDNVG 231 (435)
T ss_dssp EEEEECCS------SCSCCCCCEEEETTTTEEEEECSSS
T ss_pred eeEEeccC------CCCccEEEEEECCCCCEEEEEeCCC
Confidence 55443311 01111122222 2567777777654
No 90
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=94.10 E-value=2.2 Score=36.07 Aligned_cols=73 Identities=12% Similarity=0.000 Sum_probs=37.9
Q ss_pred CCEEEEEccCCCCcccceEEEECCC-CcEEeeeecCCCCC-CCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcce
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTAT-NQWFIPTLKGDIPP-GCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKWE 114 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~-~~W~~~~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~ 114 (390)
+++.+++++ ...++++|..+ .+...+.. .+. .........-+++.+++++.... ....+|.++..+..
T Consensus 52 dg~~l~~~~-----~~~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~ 121 (297)
T 2ojh_A 52 DGKYLLLNS-----EGLLYRLSLAGDPSPEKVDT---GFATICNNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGGT 121 (297)
T ss_dssp TSSEEEEEE-----TTEEEEEESSSCCSCEECCC---TTCCCBCSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCCC
T ss_pred CCCEEEEEc-----CCeEEEEeCCCCCCceEecc---ccccccccceEECCCCCEEEEEEeCCC--CcceEEEEECCCCc
Confidence 455555554 24689999988 76655441 111 11111222234455555543211 23568888887766
Q ss_pred eEEec
Q psy1098 115 WKRLK 119 (390)
Q Consensus 115 W~~~~ 119 (390)
-..+.
T Consensus 122 ~~~~~ 126 (297)
T 2ojh_A 122 PRLMT 126 (297)
T ss_dssp CEECC
T ss_pred eEEee
Confidence 54443
No 91
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.08 E-value=2.8 Score=36.59 Aligned_cols=64 Identities=11% Similarity=0.118 Sum_probs=38.0
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEE--eCCEEEEEcceeCCceeecceEEEEcCcce
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVV--DNTRVLIFGGMVEYGKYSSDLYELQASKWE 114 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~ 114 (390)
.+.+|+.... ...+.++|+.+++...... .+. ... .++. .++.+|+.+... ..++++|+.+.+
T Consensus 9 ~~~~~v~~~~----~~~v~~~d~~~~~~~~~~~---~~~-~~~-~~~~s~dg~~l~~~~~~~------~~i~~~d~~~~~ 73 (331)
T 3u4y_A 9 SNFGIVVEQH----LRRISFFSTDTLEILNQIT---LGY-DFV-DTAITSDCSNVVVTSDFC------QTLVQIETQLEP 73 (331)
T ss_dssp CCEEEEEEGG----GTEEEEEETTTCCEEEEEE---CCC-CEE-EEEECSSSCEEEEEESTT------CEEEEEECSSSS
T ss_pred CCEEEEEecC----CCeEEEEeCcccceeeeEE---ccC-Ccc-eEEEcCCCCEEEEEeCCC------CeEEEEECCCCc
Confidence 4567777663 3468999999888765442 221 111 2322 234577765431 368899998776
Q ss_pred e
Q psy1098 115 W 115 (390)
Q Consensus 115 W 115 (390)
.
T Consensus 74 ~ 74 (331)
T 3u4y_A 74 P 74 (331)
T ss_dssp C
T ss_pred e
Confidence 4
No 92
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.91 E-value=3.6 Score=37.27 Aligned_cols=66 Identities=8% Similarity=0.043 Sum_probs=33.5
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEe-CCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVD-NTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
+++.++.|+.+ ..+.+||..+.+-.... .. ....-.++... ++..++.|+.+ ..+.++|..+.+.
T Consensus 134 dg~~l~s~~~d----~~i~iwd~~~~~~~~~~---~~-h~~~v~~~~~~p~~~~l~s~s~d------~~v~iwd~~~~~~ 199 (393)
T 1erj_A 134 DGKFLATGAED----RLIRIWDIENRKIVMIL---QG-HEQDIYSLDYFPSGDKLVSGSGD------RTVRIWDLRTGQC 199 (393)
T ss_dssp TSSEEEEEETT----SCEEEEETTTTEEEEEE---CC-CSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEE
T ss_pred CCCEEEEEcCC----CeEEEEECCCCcEEEEE---cc-CCCCEEEEEEcCCCCEEEEecCC------CcEEEEECCCCee
Confidence 45566666633 35788888776543322 11 11111222222 34455556542 3467788877654
Q ss_pred E
Q psy1098 116 K 116 (390)
Q Consensus 116 ~ 116 (390)
.
T Consensus 200 ~ 200 (393)
T 1erj_A 200 S 200 (393)
T ss_dssp E
T ss_pred E
Confidence 3
No 93
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=93.87 E-value=3.2 Score=36.54 Aligned_cols=23 Identities=30% Similarity=0.294 Sum_probs=16.1
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCe
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMT 236 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~ 236 (390)
++..++.|+.+ ..+.+||+.+.+
T Consensus 172 ~~~~l~~~~~d----g~i~i~d~~~~~ 194 (366)
T 3k26_A 172 LGEKIMSCGMD----HSLKLWRINSKR 194 (366)
T ss_dssp TSSEEEEEETT----SCEEEEESCSHH
T ss_pred CCCEEEEecCC----CCEEEEECCCCc
Confidence 56677777765 468888887653
No 94
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=93.79 E-value=3.3 Score=36.48 Aligned_cols=62 Identities=8% Similarity=-0.057 Sum_probs=32.8
Q ss_pred cceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcceeEEec
Q psy1098 52 EELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLK 119 (390)
Q Consensus 52 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~ 119 (390)
-.++.+|..++++..+........+ ......-+++||+.+... ....++.|++.+.+.+.+.
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p--~~~a~spdg~l~~~~~~~----~~~~v~~~~~~~g~~~~~~ 79 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNP--TYLALSAKDCLYSVDKED----DEGGIAAWQIDGQTAHKLN 79 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCC--CCEEECTTCEEEEEEEET----TEEEEEEEEEETTEEEEEE
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCc--ceEEEccCCeEEEEEecC----CCceEEEEEecCCcEEEee
Confidence 3467778888888765432111111 112223356777665321 1245888888766665544
No 95
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=93.78 E-value=2.3 Score=38.42 Aligned_cols=23 Identities=13% Similarity=0.362 Sum_probs=16.3
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCe
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMT 236 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~ 236 (390)
++.+++.|+.+ ..+.+||+.+.+
T Consensus 274 ~~~~l~s~~~d----g~v~~wd~~~~~ 296 (416)
T 2pm9_A 274 DEHLLLSSGRD----NTVLLWNPESAE 296 (416)
T ss_dssp CSSCEEEEESS----SEEEEECSSSCC
T ss_pred CCCeEEEEeCC----CCEEEeeCCCCc
Confidence 56677777765 458888887764
No 96
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=93.75 E-value=0.48 Score=42.34 Aligned_cols=72 Identities=6% Similarity=0.197 Sum_probs=39.0
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCe-EeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceec
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMT-WQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCS 287 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~-W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~ 287 (390)
++++++.|+.+ ..+.++|+.+.. +..+....... ..-.+++.. ++++++.|+. -
T Consensus 116 ~~~~l~s~s~D----~~v~iwd~~~~~~~~~~~~~~~h~--~~v~~~~~~p~~~~l~s~s~------------------d 171 (345)
T 3fm0_A 116 SGNLLATCSRD----KSVWVWEVDEEDEYECVSVLNSHT--QDVKHVVWHPSQELLASASY------------------D 171 (345)
T ss_dssp TSSEEEEEETT----SCEEEEEECTTSCEEEEEEECCCC--SCEEEEEECSSSSCEEEEET------------------T
T ss_pred CCCEEEEEECC----CeEEEEECCCCCCeEEEEEecCcC--CCeEEEEECCCCCEEEEEeC------------------C
Confidence 67788888776 457788876542 32221111111 111122222 4667777764 3
Q ss_pred CceEEeecCCCeeeeccc
Q psy1098 288 NQLACLHLPEMTWEDLSV 305 (390)
Q Consensus 288 ~~~~~~d~~~~~W~~v~~ 305 (390)
..+.+||..+..|..+..
T Consensus 172 ~~i~~w~~~~~~~~~~~~ 189 (345)
T 3fm0_A 172 DTVKLYREEEDDWVCCAT 189 (345)
T ss_dssp SCEEEEEEETTEEEEEEE
T ss_pred CcEEEEEecCCCEEEEEE
Confidence 467788888877765443
No 97
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=93.57 E-value=2.9 Score=35.17 Aligned_cols=173 Identities=11% Similarity=0.026 Sum_probs=82.0
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEe-CCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVD-NTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
++.+|+... ...+..||+.......+.. .....-..++.. ++++|+.... ...+++++..+...
T Consensus 77 ~g~l~v~~~-----~~~i~~~d~~~~~~~~~~~----~~~~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~ 141 (270)
T 1rwi_B 77 AGTVYVTDF-----NNRVVTLAAGSNNQTVLPF----DGLNYPEGLAVDTQGAVYVADRG------NNRVVKLAAGSKTQ 141 (270)
T ss_dssp TCCEEEEET-----TTEEEEECTTCSCCEECCC----CSCSSEEEEEECTTCCEEEEEGG------GTEEEEECTTCCSC
T ss_pred CCCEEEEcC-----CCEEEEEeCCCceEeeeec----CCcCCCcceEECCCCCEEEEECC------CCEEEEEECCCcee
Confidence 456777654 2468889987765443321 111122344443 5578886432 13477787665543
Q ss_pred EEecCCCCCCCCCCCCCccceEEEE-CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCC
Q psy1098 116 KRLKPKPPRFGSPPCPRLGHSFTLI-GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPS 194 (390)
Q Consensus 116 ~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~ 194 (390)
...... ....-..++.. ++++|+..... +.+.+++..... ..... ...+
T Consensus 142 ~~~~~~--------~~~~p~~i~~~~~g~l~v~~~~~----------------~~i~~~~~~~~~--~~~~~--~~~~-- 191 (270)
T 1rwi_B 142 TVLPFT--------GLNDPDGVAVDNSGNVYVTDTDN----------------NRVVKLEAESNN--QVVLP--FTDI-- 191 (270)
T ss_dssp EECCCC--------SCCSCCCEEECTTCCEEEEEGGG----------------TEEEEECTTTCC--EEECC--CSSC--
T ss_pred Eeeccc--------cCCCceeEEEeCCCCEEEEECCC----------------CEEEEEecCCCc--eEeec--ccCC--
Confidence 322110 11111233333 46788764322 237778776521 11110 1111
Q ss_pred CCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE--CCEEEEEcCc
Q psy1098 195 PRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI--GDRMFIFGGW 268 (390)
Q Consensus 195 ~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~ 268 (390)
..-..++.. .++.+|+..... +.+.+||+.+..-.... . ........+.+ +++||+....
T Consensus 192 -~~p~~i~~d----~~g~l~v~~~~~----~~v~~~~~~~~~~~~~~---~--~~~~~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 192 -TAPWGIAVD----EAGTVYVTEHNT----NQVVKLLAGSTTSTVLP---F--TGLNTPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp -CSEEEEEEC----TTCCEEEEETTT----SCEEEECTTCSCCEECC---C--CSCSCEEEEEECTTCCEEEEEGG
T ss_pred -CCceEEEEC----CCCCEEEEECCC----CcEEEEcCCCCcceeec---c--CCCCCceeEEECCCCCEEEEECC
Confidence 111223332 156888876432 46889998765433211 1 11122223333 4678887643
No 98
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=93.55 E-value=0.6 Score=41.90 Aligned_cols=154 Identities=10% Similarity=0.030 Sum_probs=68.9
Q ss_pred CCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCCc
Q psy1098 86 NTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTPS 163 (390)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~ 163 (390)
++++++.|+.+ ..+.+||..+..|..+.... .....-.++.+ ++.+++.|+.+..
T Consensus 22 ~g~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~-------~h~~~v~~~~~s~~~~~l~s~s~d~~---------- 78 (377)
T 3dwl_C 22 QRTEFVTTTAT------NQVELYEQDGNGWKHARTFS-------DHDKIVTCVDWAPKSNRIVTCSQDRN---------- 78 (377)
T ss_dssp SSSEEECCCSS------SCBCEEEEETTEEEECCCBC-------CCSSCEEEEEECTTTCCEEEEETTSS----------
T ss_pred CCCEEEEecCC------CEEEEEEccCCceEEEEEEe-------cCCceEEEEEEeCCCCEEEEEeCCCe----------
Confidence 45566666653 34667777777666655432 11111222333 4567777765442
Q ss_pred cccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCe-Eeeccc
Q psy1098 164 YKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMT-WQKPQI 242 (390)
Q Consensus 164 ~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~-W~~~~~ 242 (390)
+..+|+.+.. .|..+....... ..-.++...+ +++.++.|+.+ ..+.+||+.+.+ |..+..
T Consensus 79 ------v~vwd~~~~~--~~~~~~~~~~~~--~~v~~~~~~~----~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~ 140 (377)
T 3dwl_C 79 ------AYVYEKRPDG--TWKQTLVLLRLN--RAATFVRWSP----NEDKFAVGSGA----RVISVCYFEQENDWWVSKH 140 (377)
T ss_dssp ------EEEC--------CCCCEEECCCCS--SCEEEEECCT----TSSCCEEEESS----SCEEECCC-----CCCCEE
T ss_pred ------EEEEEcCCCC--ceeeeeEecccC--CceEEEEECC----CCCEEEEEecC----CeEEEEEECCcccceeeeE
Confidence 6677776531 133221111111 1112222222 56677777765 357788887654 333221
Q ss_pred CCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecCceEEeecCCCe
Q psy1098 243 LGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMT 299 (390)
Q Consensus 243 ~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 299 (390)
... +....-.+++.. ++++++.|+. -..+.+||+.+..
T Consensus 141 ~~~-~h~~~v~~~~~~~~~~~l~~~~~------------------d~~i~iwd~~~~~ 179 (377)
T 3dwl_C 141 LKR-PLRSTILSLDWHPNNVLLAAGCA------------------DRKAYVLSAYVRD 179 (377)
T ss_dssp ECS-SCCSCEEEEEECTTSSEEEEEES------------------SSCEEEEEECCSS
T ss_pred eec-ccCCCeEEEEEcCCCCEEEEEeC------------------CCEEEEEEEEecc
Confidence 111 111122222332 5667777775 2467778875443
No 99
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=93.43 E-value=2 Score=37.22 Aligned_cols=74 Identities=9% Similarity=-0.028 Sum_probs=37.0
Q ss_pred CEEEEEccCCCCcccceEEEECCCCcEEee-eecCCCCCCCceeeEEE-eCCEEEEEcceeC---------CceeecceE
Q psy1098 38 DLMLVFGGGNEGIVEELHVFNTATNQWFIP-TLKGDIPPGCAAYGIVV-DNTRVLIFGGMVE---------YGKYSSDLY 106 (390)
Q Consensus 38 ~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~-~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~---------~~~~~~~v~ 106 (390)
+.+|+.... +.++.||+. ++...+ ...........-..++. .++++|+...... .......++
T Consensus 83 g~l~v~~~~-----~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~ 156 (314)
T 1pjx_A 83 NQLFVADMR-----LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIY 156 (314)
T ss_dssp SEEEEEETT-----TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEE
T ss_pred CcEEEEECC-----CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEE
Confidence 678887641 258899998 776554 32100001111223333 3567877653210 011124688
Q ss_pred EEEcCcceeEEe
Q psy1098 107 ELQASKWEWKRL 118 (390)
Q Consensus 107 ~~d~~~~~W~~~ 118 (390)
++|+. .+...+
T Consensus 157 ~~~~~-g~~~~~ 167 (314)
T 1pjx_A 157 CFTTD-GQMIQV 167 (314)
T ss_dssp EECTT-SCEEEE
T ss_pred EECCC-CCEEEe
Confidence 89876 444443
No 100
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.31 E-value=2.3 Score=42.61 Aligned_cols=64 Identities=5% Similarity=0.095 Sum_probs=34.5
Q ss_pred CEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEe-C--CEEEEEcceeCCceeecceEEEEcCcc
Q psy1098 38 DLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVD-N--TRVLIFGGMVEYGKYSSDLYELQASKW 113 (390)
Q Consensus 38 ~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~v~~~d~~~~ 113 (390)
+..++.|+.+ ..+.+||..++.|..+..... ....-.++... + +.+++.|+.+ ..+.+||..+.
T Consensus 67 ~~~l~s~s~D----g~I~vwd~~~~~~~~~~~~~~--h~~~V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~ 133 (753)
T 3jro_A 67 GTILASCSYD----GKVLIWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKEN 133 (753)
T ss_dssp CSEEEEEETT----SCEEEEEEETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCSS
T ss_pred CCEEEEEeCC----CeEEEEECCCCcccccccccC--CCCCeEEEEECCCCCCCEEEEEeCC------CcEEEEEeecC
Confidence 5566666643 348888988888766553211 11112222222 2 5567777653 23666776554
No 101
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=93.24 E-value=4.2 Score=36.04 Aligned_cols=28 Identities=4% Similarity=0.014 Sum_probs=17.7
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQ 241 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~ 241 (390)
...+|+.+..+ +.+.+|++.+.+.+.+.
T Consensus 222 g~~l~v~~~~~----~~v~v~~~~~g~~~~~~ 249 (361)
T 3scy_A 222 GKFAYLINEIG----GTVIAFRYADGMLDEIQ 249 (361)
T ss_dssp SSEEEEEETTT----CEEEEEEEETTEEEEEE
T ss_pred CCEEEEEcCCC----CeEEEEEecCCceEEeE
Confidence 33566665332 56888888877765543
No 102
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=93.24 E-value=3.6 Score=35.23 Aligned_cols=65 Identities=5% Similarity=-0.022 Sum_probs=34.9
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
++. ++.|+.+ ..+.+||+.+.+-..... . ....-.+++.. +++ ++.|+. -.
T Consensus 195 ~~~-~~~~~~d----g~i~i~d~~~~~~~~~~~--~--~~~~i~~~~~~~~~~-l~~~~~------------------dg 246 (313)
T 3odt_A 195 DGH-FISCSND----GLIKLVDMHTGDVLRTYE--G--HESFVYCIKLLPNGD-IVSCGE------------------DR 246 (313)
T ss_dssp TTE-EEEEETT----SEEEEEETTTCCEEEEEE--C--CSSCEEEEEECTTSC-EEEEET------------------TS
T ss_pred CCe-EEEccCC----CeEEEEECCchhhhhhhh--c--CCceEEEEEEecCCC-EEEEec------------------CC
Confidence 566 6666655 468889988654332110 0 11111233333 343 555554 35
Q ss_pred ceEEeecCCCeeee
Q psy1098 289 QLACLHLPEMTWED 302 (390)
Q Consensus 289 ~~~~~d~~~~~W~~ 302 (390)
.+.+||+.+.+...
T Consensus 247 ~v~iwd~~~~~~~~ 260 (313)
T 3odt_A 247 TVRIWSKENGSLKQ 260 (313)
T ss_dssp EEEEECTTTCCEEE
T ss_pred EEEEEECCCCceeE
Confidence 78899988776443
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=93.17 E-value=1 Score=40.97 Aligned_cols=106 Identities=11% Similarity=-0.008 Sum_probs=51.9
Q ss_pred EEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCCccc
Q psy1098 88 RVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTPSYK 165 (390)
Q Consensus 88 ~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~ 165 (390)
.+++.|+.+ ..+.++|..+.+....-... ... ....++.+ ++..++.|+.+.
T Consensus 145 ~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~------~~~-~~v~~~~~~~~~~~l~~~~~d~------------- 198 (402)
T 2aq5_A 145 NVLLSAGCD------NVILVWDVGTGAAVLTLGPD------VHP-DTIYSVDWSRDGALICTSCRDK------------- 198 (402)
T ss_dssp TEEEEEETT------SCEEEEETTTTEEEEEECTT------TCC-SCEEEEEECTTSSCEEEEETTS-------------
T ss_pred CEEEEEcCC------CEEEEEECCCCCccEEEecC------CCC-CceEEEEECCCCCEEEEEecCC-------------
Confidence 467777653 34778898877544322100 011 11222333 466666666543
Q ss_pred cccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEc---CCCCCccCcEEEEecCCC
Q psy1098 166 YLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYG---GMSGNRLSDLFMLDINSM 235 (390)
Q Consensus 166 ~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~G---G~~~~~~~~v~~~d~~~~ 235 (390)
.+..+|+.+.. .-..+. ......+. ..+...+ ++++++.| +.+ ..+.+||+.+.
T Consensus 199 ---~i~iwd~~~~~--~~~~~~--~~~~~~~~-~~~~~~~----~~~~l~~g~~~~~d----~~i~iwd~~~~ 255 (402)
T 2aq5_A 199 ---RVRVIEPRKGT--VVAEKD--RPHEGTRP-VHAVFVS----EGKILTTGFSRMSE----RQVALWDTKHL 255 (402)
T ss_dssp ---EEEEEETTTTE--EEEEEE--CSSCSSSC-CEEEECS----TTEEEEEEECTTCC----EEEEEEETTBC
T ss_pred ---cEEEEeCCCCc--eeeeec--cCCCCCcc-eEEEEcC----CCcEEEEeccCCCC----ceEEEEcCccc
Confidence 37778877532 111110 01111111 2233332 67777777 332 56888888764
No 104
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.90 E-value=5.5 Score=36.44 Aligned_cols=211 Identities=13% Similarity=0.066 Sum_probs=101.5
Q ss_pred cceEEEECCCCcEEeeeecCCCCCCCceeeEE-EeCCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCC
Q psy1098 52 EELHVFNTATNQWFIPTLKGDIPPGCAAYGIV-VDNTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPC 130 (390)
Q Consensus 52 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~ 130 (390)
..++++|.....-..+... .. .-.+++ .-+++.+++++.... ...++.+|+.+.+...+...
T Consensus 159 ~~i~i~d~~g~~~~~l~~~---~~--~v~~~~~Spdg~~la~~s~~~~---~~~i~~~d~~tg~~~~l~~~--------- 221 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS---PQ--PLMSPAWSPDGSKLAYVTFESG---RSALVIQTLANGAVRQVASF--------- 221 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE---SS--CEEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCCEEEEECC---------
T ss_pred ceEEEEcCCCCCCEEEeCC---CC--cceeeEEcCCCCEEEEEEecCC---CcEEEEEECCCCcEEEeecC---------
Confidence 6788999876554444321 11 111222 224455555554221 24689999988876665432
Q ss_pred CCccceEEEE--CC-EEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeecc
Q psy1098 131 PRLGHSFTLI--GN-KVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDE 207 (390)
Q Consensus 131 ~r~~~~~~~~--~~-~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~ 207 (390)
.. ......+ ++ .|++.+..+. ...++.+|+.+. +...+.. .+ .........|
T Consensus 222 ~~-~~~~~~~spdg~~la~~~~~~g--------------~~~i~~~d~~~~---~~~~l~~---~~--~~~~~~~~sp-- 276 (415)
T 2hqs_A 222 PR-HNGAPAFSPDGSKLAFALSKTG--------------SLNLYVMDLASG---QIRQVTD---GR--SNNTEPTWFP-- 276 (415)
T ss_dssp SS-CEEEEEECTTSSEEEEEECTTS--------------SCEEEEEETTTC---CEEECCC---CS--SCEEEEEECT--
T ss_pred CC-cccCEEEcCCCCEEEEEEecCC--------------CceEEEEECCCC---CEEeCcC---CC--CcccceEECC--
Confidence 11 1222333 44 4554444322 225888898763 2333211 11 1112222222
Q ss_pred CCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEE-ECCEEEEEcCcccCCCcccccccccccee
Q psy1098 208 YKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACV-IGDRMFIFGGWVPILKDESRSLHEKEWKC 286 (390)
Q Consensus 208 ~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~i~GG~~~~~~~~~~~~~~~~~~~ 286 (390)
+++.++++...+ ....++++|+.+.+-..+.. ........+. -+++.+++++....
T Consensus 277 --dg~~l~~~s~~~-g~~~i~~~d~~~~~~~~l~~-----~~~~~~~~~~spdG~~l~~~~~~~g--------------- 333 (415)
T 2hqs_A 277 --DSQNLAFTSDQA-GRPQVYKVNINGGAPQRITW-----EGSQNQDADVSSDGKFMVMVSSNGG--------------- 333 (415)
T ss_dssp --TSSEEEEEECTT-SSCEEEEEETTSSCCEECCC-----SSSEEEEEEECTTSSEEEEEEECSS---------------
T ss_pred --CCCEEEEEECCC-CCcEEEEEECCCCCEEEEec-----CCCcccCeEECCCCCEEEEEECcCC---------------
Confidence 455444443211 12468999998876544321 1112222222 25665555543210
Q ss_pred cCceEEeecCCCeeeecccccccCCCCCCCCCcceeeeCCEEEEEeccC
Q psy1098 287 SNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVINSRMYIWSGRD 335 (390)
Q Consensus 287 ~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~ 335 (390)
...++++|+.+.+...+.. . ......+..-+++.+++++.+
T Consensus 334 ~~~i~~~d~~~~~~~~l~~------~--~~~~~~~~spdg~~l~~~s~~ 374 (415)
T 2hqs_A 334 QQHIAKQDLATGGVQVLSS------T--FLDETPSLAPNGTMVIYSSSQ 374 (415)
T ss_dssp CEEEEEEETTTCCEEECCC------S--SSCEEEEECTTSSEEEEEEEE
T ss_pred ceEEEEEECCCCCEEEecC------C--CCcCCeEEcCCCCEEEEEEcC
Confidence 2478999999888766543 1 111111122257777777654
No 105
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=92.70 E-value=3.8 Score=40.60 Aligned_cols=32 Identities=13% Similarity=0.149 Sum_probs=20.7
Q ss_pred CCEEEEEccC-C-CCcccceEEEECCCCcEEeee
Q psy1098 37 KDLMLVFGGG-N-EGIVEELHVFNTATNQWFIPT 68 (390)
Q Consensus 37 ~~~iyv~GG~-~-~~~~~~~~~~d~~~~~W~~~~ 68 (390)
+++.+++++. + ......++++|..+++...+.
T Consensus 47 dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~ 80 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLV 80 (741)
T ss_dssp TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEeccCCCCcccEEEEEECCCCceeEcc
Confidence 4555555543 2 223458999999988876655
No 106
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=92.47 E-value=8 Score=37.26 Aligned_cols=75 Identities=16% Similarity=0.244 Sum_probs=42.7
Q ss_pred CcEEEEecCCCe--EeecccCCCCCCCCceeeEEEECCEEEEEcCcccCCCccccccccccceecCceEEeecCCCe--e
Q psy1098 225 SDLFMLDINSMT--WQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMT--W 300 (390)
Q Consensus 225 ~~v~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--W 300 (390)
..++.+|+.+.+ |+... +.+......+..++.+|+ |.. ...++.+|.++.+ |
T Consensus 444 g~l~a~D~~tG~~~W~~~~-----~~~~~~~~~~t~gg~v~~-g~~------------------dg~l~a~D~~tG~~lw 499 (571)
T 2ad6_A 444 GQIRAFDLTTGKAKWTKWE-----KFAAWGGTLYTKGGLVWY-ATL------------------DGYLKALDNKDGKELW 499 (571)
T ss_dssp EEEEEECTTTCCEEEEEEE-----SSCCCSBCEEETTTEEEE-ECT------------------TSEEEEEETTTCCEEE
T ss_pred CeEEEEECCCCCEEEEecC-----CCCccceeEEECCCEEEE-EcC------------------CCeEEEEECCCCCEEE
Confidence 568999998764 88632 112222233334677777 432 3578999988765 6
Q ss_pred eecccccccCCCCCCCCCccee-eeCCEEEEE
Q psy1098 301 EDLSVEVTDDFLPKPRAGHCAS-VINSRMYIW 331 (390)
Q Consensus 301 ~~v~~~~~~~~~p~~r~~~~~~-~~~~~l~v~ 331 (390)
+.- ++....+..++ ..++++||.
T Consensus 500 ~~~--------~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 500 NFK--------MPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp EEE--------CSSCCCSCCEEEEETTEEEEE
T ss_pred EEe--------CCCCcEeeeEEEEECCEEEEE
Confidence 643 22222233333 268888875
No 107
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.40 E-value=7.8 Score=38.66 Aligned_cols=24 Identities=8% Similarity=0.130 Sum_probs=16.6
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeE
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTW 237 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W 237 (390)
++..++.|+.+ ..+.+||+.+.+-
T Consensus 197 ~~~~l~~~~~d----g~i~~~d~~~~~~ 220 (814)
T 3mkq_A 197 DKPYMITASDD----LTIKIWDYQTKSC 220 (814)
T ss_dssp TCCEEEEECTT----SEEEEEETTTTEE
T ss_pred CCCEEEEEeCC----CEEEEEECCCCcE
Confidence 45677777665 3688889887653
No 108
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=92.30 E-value=6.5 Score=35.80 Aligned_cols=22 Identities=14% Similarity=0.291 Sum_probs=16.0
Q ss_pred cEEEEEcCCCCCccCcEEEEecCCCe
Q psy1098 211 TKLIIYGGMSGNRLSDLFMLDINSMT 236 (390)
Q Consensus 211 ~~i~v~GG~~~~~~~~v~~~d~~~~~ 236 (390)
+.+++.|+.+ ..+.+||+.+..
T Consensus 308 g~~l~sgs~D----~~i~iwd~~~~~ 329 (410)
T 1vyh_C 308 GPFLLSGSRD----KTIKMWDVSTGM 329 (410)
T ss_dssp CCEEEEEETT----SEEEEEETTTTE
T ss_pred CCEEEEEeCC----CeEEEEECCCCc
Confidence 5677777765 468889988765
No 109
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=92.27 E-value=6.2 Score=35.49 Aligned_cols=25 Identities=12% Similarity=0.050 Sum_probs=18.2
Q ss_pred cEEEEEcCCCCCccCcEEEEecCCCeEee
Q psy1098 211 TKLIIYGGMSGNRLSDLFMLDINSMTWQK 239 (390)
Q Consensus 211 ~~i~v~GG~~~~~~~~v~~~d~~~~~W~~ 239 (390)
+.+++.|+.+ ..+.+||+.+.+-..
T Consensus 178 ~~~l~~~~~d----g~v~iwd~~~~~~~~ 202 (416)
T 2pm9_A 178 AHVFASAGSS----NFASIWDLKAKKEVI 202 (416)
T ss_dssp TTEEEEESSS----SCEEEEETTTTEEEE
T ss_pred CcEEEEEcCC----CCEEEEECCCCCcce
Confidence 5678887765 468899998876543
No 110
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=91.98 E-value=9.3 Score=36.92 Aligned_cols=76 Identities=16% Similarity=0.248 Sum_probs=44.8
Q ss_pred eeeEEeCCEEEEEccCCCCcccceEEEECCCCc--EEeeeecCCCCCCC---ceeeEEEeCCEEEEEcceeCCceeecce
Q psy1098 31 HRAVAIKDLMLVFGGGNEGIVEELHVFNTATNQ--WFIPTLKGDIPPGC---AAYGIVVDNTRVLIFGGMVEYGKYSSDL 105 (390)
Q Consensus 31 ~~~~~~~~~iyv~GG~~~~~~~~~~~~d~~~~~--W~~~~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~~~~~v 105 (390)
.+.++.++.||+.... ..++.+|..+.+ |+.-.........+ ...+.+..+++||+... ...+
T Consensus 62 ~~P~v~~g~vyv~~~~-----~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-------dg~l 129 (582)
T 1flg_A 62 SQAIVSDGVIYVTASY-----SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-------DASV 129 (582)
T ss_dssp CCCEEETTEEEEEETT-----TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-------TTEE
T ss_pred eccEEECCEEEEEcCC-----CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC-------CCEE
Confidence 3446778999987762 238999997666 76543211100011 11334567888887421 1358
Q ss_pred EEEEcCcc--eeEEe
Q psy1098 106 YELQASKW--EWKRL 118 (390)
Q Consensus 106 ~~~d~~~~--~W~~~ 118 (390)
+.+|..+. .|+.-
T Consensus 130 ~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 130 VALNKNTGKVVWKKK 144 (582)
T ss_dssp EEEESSSCCEEEEEE
T ss_pred EEEECCCCCEEeeec
Confidence 89998766 58754
No 111
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=91.98 E-value=6 Score=34.68 Aligned_cols=26 Identities=15% Similarity=0.372 Sum_probs=17.9
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEee
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQK 239 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~ 239 (390)
++..++.++.+ ..+.+||+.+.+-..
T Consensus 229 ~~~~l~~~~~d----~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 229 DLTYFITSSRD----TNSFLVDVSTLQVLK 254 (369)
T ss_dssp TSSEEEEEETT----SEEEEEETTTCCEEE
T ss_pred CCCEEEEecCC----ceEEEEECCCCceee
Confidence 56667777655 468899988765444
No 112
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=91.96 E-value=7.1 Score=35.52 Aligned_cols=146 Identities=9% Similarity=-0.021 Sum_probs=69.0
Q ss_pred CEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEE-eCCEEEEEcceeCCceeecceEEEEcCcceeE
Q psy1098 38 DLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVV-DNTRVLIFGGMVEYGKYSSDLYELQASKWEWK 116 (390)
Q Consensus 38 ~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~ 116 (390)
+.+++.|+.+ ..+.+||..+.+....- .... ..-.+++. .++++++.|+.+ ..+.+||..+..-.
T Consensus 120 ~~~l~s~s~D----g~i~vwd~~~~~~~~~l---~~h~-~~V~~v~~~~~~~~l~sgs~D------~~i~iwd~~~~~~~ 185 (410)
T 1vyh_C 120 FSVMVSASED----ATIKVWDYETGDFERTL---KGHT-DSVQDISFDHSGKLLASCSAD------MTIKLWDFQGFECI 185 (410)
T ss_dssp SSEEEEEESS----SCEEEEETTTCCCCEEE---CCCS-SCEEEEEECTTSSEEEEEETT------SCCCEEETTSSCEE
T ss_pred CCEEEEEeCC----CeEEEEECCCCcEEEEE---eccC-CcEEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCcee
Confidence 4466666633 34788888776543321 1111 11122222 245677777753 23556777664322
Q ss_pred EecCCCCCCCCCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCC
Q psy1098 117 RLKPKPPRFGSPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPS 194 (390)
Q Consensus 117 ~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~ 194 (390)
..+. .-...-.++.+ ++..++.|+.+. .+..+|+.+.. .-..+.. ..
T Consensus 186 --~~~~-------~h~~~V~~v~~~p~~~~l~s~s~D~----------------~i~~wd~~~~~--~~~~~~~---h~- 234 (410)
T 1vyh_C 186 --RTMH-------GHDHNVSSVSIMPNGDHIVSASRDK----------------TIKMWEVQTGY--CVKTFTG---HR- 234 (410)
T ss_dssp --ECCC-------CCSSCEEEEEECSSSSEEEEEETTS----------------EEEEEETTTCC--EEEEEEC---CS-
T ss_pred --EEEc-------CCCCCEEEEEEeCCCCEEEEEeCCC----------------eEEEEECCCCc--EEEEEeC---CC-
Confidence 2211 11111222333 456666676554 26677776532 1111110 01
Q ss_pred CCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeE
Q psy1098 195 PRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTW 237 (390)
Q Consensus 195 ~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W 237 (390)
..-..+... .++.+++.|+.+ ..+.+||+.+...
T Consensus 235 --~~v~~~~~~---~~g~~l~s~s~D----~~v~vwd~~~~~~ 268 (410)
T 1vyh_C 235 --EWVRMVRPN---QDGTLIASCSND----QTVRVWVVATKEC 268 (410)
T ss_dssp --SCEEEEEEC---TTSSEEEEEETT----SCEEEEETTTCCE
T ss_pred --ccEEEEEEC---CCCCEEEEEcCC----CeEEEEECCCCce
Confidence 111122221 267788888776 4577888776544
No 113
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=91.96 E-value=6.2 Score=34.85 Aligned_cols=184 Identities=6% Similarity=0.057 Sum_probs=85.7
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEE-eCCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVV-DNTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
++++++.||.+ ..+.++|..++.|........ .....-.+++. -++++++.|+.+ ..+.++|..+..+
T Consensus 27 ~g~~las~~~D----~~i~iw~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~s~D------~~v~iw~~~~~~~ 95 (345)
T 3fm0_A 27 AGTLLASCGGD----RRIRIWGTEGDSWICKSVLSE-GHQRTVRKVAWSPCGNYLASASFD------ATTCIWKKNQDDF 95 (345)
T ss_dssp TSSCEEEEETT----SCEEEEEEETTEEEEEEEECS-SCSSCEEEEEECTTSSEEEEEETT------SCEEEEEECCC-E
T ss_pred CCCEEEEEcCC----CeEEEEEcCCCcceeeeeecc-ccCCcEEEEEECCCCCEEEEEECC------CcEEEEEccCCCe
Confidence 45667777743 347788888877754331100 11111122222 245666777653 2355566665554
Q ss_pred EEecCCCCCCCCCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCC
Q psy1098 116 KRLKPKPPRFGSPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLP 193 (390)
Q Consensus 116 ~~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p 193 (390)
..+.... .-...-.++.+ ++.+++.|+.+.. +..+|+.... .+..+.......
T Consensus 96 ~~~~~~~-------~h~~~v~~v~~sp~~~~l~s~s~D~~----------------v~iwd~~~~~--~~~~~~~~~~h~ 150 (345)
T 3fm0_A 96 ECVTTLE-------GHENEVKSVAWAPSGNLLATCSRDKS----------------VWVWEVDEED--EYECVSVLNSHT 150 (345)
T ss_dssp EEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTSC----------------EEEEEECTTS--CEEEEEEECCCC
T ss_pred EEEEEcc-------CCCCCceEEEEeCCCCEEEEEECCCe----------------EEEEECCCCC--CeEEEEEecCcC
Confidence 4333211 11111122333 4667777776543 6666765432 222111111111
Q ss_pred CCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCc
Q psy1098 194 SPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGW 268 (390)
Q Consensus 194 ~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~ 268 (390)
.. -.+++..+ ++++++.|+.+ ..+.+||..+..|..+...... ...-.+++.. +++.++.|+.
T Consensus 151 ~~--v~~~~~~p----~~~~l~s~s~d----~~i~~w~~~~~~~~~~~~~~~h--~~~v~~l~~sp~g~~l~s~s~ 214 (345)
T 3fm0_A 151 QD--VKHVVWHP----SQELLASASYD----DTVKLYREEEDDWVCCATLEGH--ESTVWSLAFDPSGQRLASCSD 214 (345)
T ss_dssp SC--EEEEEECS----SSSCEEEEETT----SCEEEEEEETTEEEEEEEECCC--SSCEEEEEECTTSSEEEEEET
T ss_pred CC--eEEEEECC----CCCEEEEEeCC----CcEEEEEecCCCEEEEEEecCC--CCceEEEEECCCCCEEEEEeC
Confidence 11 11222222 56677888766 4578888888887653221111 1111122222 5667777765
No 114
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=91.94 E-value=4.5 Score=35.16 Aligned_cols=103 Identities=13% Similarity=0.253 Sum_probs=51.6
Q ss_pred EeCCEEEEEcceeCCceeecceEEEEcC-cceeEEecCCCCCCCCCCCCCccceEEEE-CCEEEEEcCccCCCCCCCCCC
Q psy1098 84 VDNTRVLIFGGMVEYGKYSSDLYELQAS-KWEWKRLKPKPPRFGSPPCPRLGHSFTLI-GNKVYLFGGLANSGGDETKPT 161 (390)
Q Consensus 84 ~~~~~iyv~GG~~~~~~~~~~v~~~d~~-~~~W~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~ 161 (390)
..++.||+.... ..+++||+. ...|...... . ...+.+.. ++.+++. ....
T Consensus 105 ~~~~~l~v~t~~-------~~l~~~d~~g~~~~~~~~~~---------~-~~~~~~~~~~g~l~vg-t~~~--------- 157 (330)
T 3hxj_A 105 IFEDILYVTSMD-------GHLYAINTDGTEKWRFKTKK---------A-IYATPIVSEDGTIYVG-SNDN--------- 157 (330)
T ss_dssp EETTEEEEECTT-------SEEEEECTTSCEEEEEECSS---------C-CCSCCEECTTSCEEEE-CTTS---------
T ss_pred EECCEEEEEecC-------CEEEEEcCCCCEEEEEcCCC---------c-eeeeeEEcCCCEEEEE-cCCC---------
Confidence 347788874311 348889887 3356554321 1 12223334 5667663 3211
Q ss_pred CccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCC-CeEee
Q psy1098 162 PSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINS-MTWQK 239 (390)
Q Consensus 162 ~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~-~~W~~ 239 (390)
.++.+|.. . ...|.... +.... .+.+.. .++.+|+.. ..+++||... ..|+.
T Consensus 158 -------~l~~~d~~-g-~~~~~~~~-----~~~~~-~~~~~d----~~g~l~v~t-------~~l~~~d~~g~~~~~~ 210 (330)
T 3hxj_A 158 -------YLYAINPD-G-TEKWRFKT-----NDAIT-SAASIG----KDGTIYFGS-------DKVYAINPDGTEKWNF 210 (330)
T ss_dssp -------EEEEECTT-S-CEEEEEEC-----SSCCC-SCCEEC----TTCCEEEES-------SSEEEECTTSCEEEEE
T ss_pred -------EEEEECCC-C-CEeEEEec-----CCCce-eeeEEc----CCCEEEEEe-------CEEEEECCCCcEEEEE
Confidence 37788876 2 24576521 11111 122221 166777654 4588888432 34665
No 115
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=91.87 E-value=9.9 Score=36.97 Aligned_cols=76 Identities=13% Similarity=0.023 Sum_probs=44.8
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCC-CCCCCc---eeeEEEE-CCEEEEEcCcccCCCccccccccccc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGP-QPLPRS---LHTACVI-GDRMFIFGGWVPILKDESRSLHEKEW 284 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~-~p~~r~---~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~ 284 (390)
++++++.+..++ ...++++|+.+.+++.+..... ...+.. ....+.. ++++++.+.. +
T Consensus 252 dg~l~~~~~~~~--~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~-------------- 314 (662)
T 3azo_A 252 DGSLIVATDRTG--WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G-------------- 314 (662)
T ss_dssp TSCEEEEECTTS--SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S--------------
T ss_pred CCeEEEEECCCC--CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C--------------
Confidence 566777765543 2479999998888887542111 001111 1123333 5677766543 1
Q ss_pred eecCceEEeecCCCeeeecc
Q psy1098 285 KCSNQLACLHLPEMTWEDLS 304 (390)
Q Consensus 285 ~~~~~~~~~d~~~~~W~~v~ 304 (390)
...++.+|+.+.+.+.+.
T Consensus 315 --~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 315 --AAVLGILDPESGELVDAA 332 (662)
T ss_dssp --SCEEEEEETTTTEEEECC
T ss_pred --ccEEEEEECCCCcEEEec
Confidence 468888998888776664
No 116
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=91.80 E-value=10 Score=37.38 Aligned_cols=68 Identities=16% Similarity=0.111 Sum_probs=36.3
Q ss_pred CCEEEEEccCCCCcccceEEEECCCC---cEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcc
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATN---QWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKW 113 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~---~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~ 113 (390)
+++.++++.. ..++++|..+. .-..+. ... .........-+++.++++.. ..++++|..+.
T Consensus 119 Dg~~l~~~~~-----~~i~~~d~~~~~~~~~~~l~---~~~-~~~~~~~~SPDG~~la~~~~-------~~i~~~d~~~g 182 (741)
T 2ecf_A 119 DAQRLLFPLG-----GELYLYDLKQEGKAAVRQLT---HGE-GFATDAKLSPKGGFVSFIRG-------RNLWVIDLASG 182 (741)
T ss_dssp TSSEEEEEET-----TEEEEEESSSCSTTSCCBCC---CSS-SCEEEEEECTTSSEEEEEET-------TEEEEEETTTT
T ss_pred CCCEEEEEeC-----CcEEEEECCCCCcceEEEcc---cCC-cccccccCCCCCCEEEEEeC-------CcEEEEecCCC
Confidence 4555555543 67999999876 444333 111 11112222234444444431 26899999887
Q ss_pred eeEEecC
Q psy1098 114 EWKRLKP 120 (390)
Q Consensus 114 ~W~~~~~ 120 (390)
+..++..
T Consensus 183 ~~~~~~~ 189 (741)
T 2ecf_A 183 RQMQLTA 189 (741)
T ss_dssp EEEECCC
T ss_pred CEEEecc
Confidence 7666543
No 117
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=91.79 E-value=6.5 Score=34.69 Aligned_cols=240 Identities=11% Similarity=0.128 Sum_probs=115.6
Q ss_pred ceeEEecCCCCCCCCCCCceeeeEEe-CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEE
Q psy1098 11 VYRWRRIDDPAGPQPRPRHGHRAVAI-KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRV 89 (390)
Q Consensus 11 ~~~W~~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i 89 (390)
-.+|+.+. .|......++... .+.+|++|- . ..++.-.-...+|+.+..... .......++...++.+
T Consensus 24 g~~W~~~~-----~~~~~~~~~v~~~~~~~~~~~G~-~----g~i~~s~DgG~tW~~~~~~~~-~~~~~~~~i~~~~~~~ 92 (327)
T 2xbg_A 24 YNPWEAIQ-----LPTTATILDMSFIDRHHGWLVGV-N----ATLMETRDGGQTWEPRTLVLD-HSDYRFNSVSFQGNEG 92 (327)
T ss_dssp SCCEEEEE-----CSCSSCEEEEEESSSSCEEEEET-T----TEEEEESSTTSSCEECCCCCS-CCCCEEEEEEEETTEE
T ss_pred CCCceEee-----cCCCCcEEEEEECCCCcEEEEcC-C----CeEEEeCCCCCCCeECCCCCC-CCCccEEEEEecCCeE
Confidence 45899885 2323333333333 456787653 1 123332223458988753211 1122334455556788
Q ss_pred EEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEE-ECCEEEEEcCccCCCCCCCCCCCcccccc
Q psy1098 90 LIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTL-IGNKVYLFGGLANSGGDETKPTPSYKYLD 168 (390)
Q Consensus 90 yv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~~ 168 (390)
|+.|-. ..+++-+-.-.+|+.+.... ..|. ....++. -++.+|+.|...
T Consensus 93 ~~~g~~-------g~i~~S~DgG~tW~~~~~~~----~~~~--~~~~i~~~~~~~~~~~~~~g----------------- 142 (327)
T 2xbg_A 93 WIVGEP-------PIMLHTTDGGQSWSQIPLDP----KLPG--SPRLIKALGNGSAEMITNVG----------------- 142 (327)
T ss_dssp EEEEET-------TEEEEESSTTSSCEECCCCT----TCSS--CEEEEEEEETTEEEEEETTC-----------------
T ss_pred EEEECC-------CeEEEECCCCCCceECcccc----CCCC--CeEEEEEECCCCEEEEeCCc-----------------
Confidence 886521 12444333356899876421 0111 1223333 357888776421
Q ss_pred ceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecC-CCeEeecccCCCCC
Q psy1098 169 DFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDIN-SMTWQKPQILGPQP 247 (390)
Q Consensus 169 ~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~-~~~W~~~~~~~~~p 247 (390)
.+++-+-. ..+|+.+.. +.....+.+...+ ++.+++.|-. ..+++-+-. ..+|+.+.. +
T Consensus 143 ~v~~S~Dg---G~tW~~~~~----~~~~~~~~~~~~~----~~~~~~~g~~-----G~~~~S~d~gG~tW~~~~~----~ 202 (327)
T 2xbg_A 143 AIYRTKDS---GKNWQALVQ----EAIGVMRNLNRSP----SGEYVAVSSR-----GSFYSTWEPGQTAWEPHNR----T 202 (327)
T ss_dssp CEEEESST---TSSEEEEEC----SCCCCEEEEEECT----TSCEEEEETT-----SSEEEEECTTCSSCEEEEC----C
T ss_pred cEEEEcCC---CCCCEEeec----CCCcceEEEEEcC----CCcEEEEECC-----CcEEEEeCCCCCceeECCC----C
Confidence 13322111 257988643 1122233444332 5667766532 235554333 578998632 2
Q ss_pred CCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecCceEEeecC-CCeeeecccccccCCCCCCCCCcceeee-
Q psy1098 248 LPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLP-EMTWEDLSVEVTDDFLPKPRAGHCASVI- 324 (390)
Q Consensus 248 ~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~W~~v~~~~~~~~~p~~r~~~~~~~~- 324 (390)
.+...+.++.. ++++|+.+.. ..+++.+.. ..+|+.+..+. ++.....++.+..
T Consensus 203 ~~~~~~~~~~~~~g~~~~~~~~-------------------G~~~~s~~D~G~tW~~~~~~~----~~~~~~~~~v~~~~ 259 (327)
T 2xbg_A 203 TSRRLHNMGFTPDGRLWMIVNG-------------------GKIAFSDPDNSENWGELLSPL----RRNSVGFLDLAYRT 259 (327)
T ss_dssp SSSCEEEEEECTTSCEEEEETT-------------------TEEEEEETTEEEEECCCBCTT----SSCCSCEEEEEESS
T ss_pred CCCccceeEECCCCCEEEEeCC-------------------ceEEEecCCCCCeeEeccCCc----ccCCcceEEEEecC
Confidence 33444444443 5678877631 234443223 66899876410 1222111222222
Q ss_pred CCEEEEEecc
Q psy1098 325 NSRMYIWSGR 334 (390)
Q Consensus 325 ~~~l~v~GG~ 334 (390)
++.+|++|+.
T Consensus 260 ~~~~~~~g~~ 269 (327)
T 2xbg_A 260 PNEVWLAGGA 269 (327)
T ss_dssp SSCEEEEEST
T ss_pred CCEEEEEeCC
Confidence 5778888764
No 118
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=91.78 E-value=6.2 Score=35.20 Aligned_cols=144 Identities=10% Similarity=0.027 Sum_probs=72.7
Q ss_pred EEEEEccCCCCcccceEEEECCCCcEEeeeecCCC-CCCCceeeEEEe--CCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 39 LMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDI-PPGCAAYGIVVD--NTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 39 ~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
.+++.|+.+ ..+.+||..+....... .. .....-.++... ++.+++.|+.+ ..+..+|......
T Consensus 87 ~~l~s~~~d----g~i~iwd~~~~~~~~~~---~~~~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~ 153 (383)
T 3ei3_B 87 TTVAVGSKG----GDIILWDYDVQNKTSFI---QGMGPGDAITGMKFNQFNTNQLFVSSIR------GATTLRDFSGSVI 153 (383)
T ss_dssp TEEEEEEBT----SCEEEEETTSTTCEEEE---CCCSTTCBEEEEEEETTEEEEEEEEETT------TEEEEEETTSCEE
T ss_pred CEEEEEcCC----CeEEEEeCCCcccceee---ecCCcCCceeEEEeCCCCCCEEEEEeCC------CEEEEEECCCCce
Confidence 567777643 35888999877765544 11 111122233333 34666666542 3477788887665
Q ss_pred EEecCCCCCCCCCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCC
Q psy1098 116 KRLKPKPPRFGSPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLP 193 (390)
Q Consensus 116 ~~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p 193 (390)
..+.... .......++.+ ++.+++.|+.+. .+..+|+.. .....+.. ..
T Consensus 154 ~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~----------------~i~i~d~~~---~~~~~~~~---h~ 204 (383)
T 3ei3_B 154 QVFAKTD-------SWDYWYCCVDVSVSRQMLATGDSTG----------------RLLLLGLDG---HEIFKEKL---HK 204 (383)
T ss_dssp EEEECCC-------CSSCCEEEEEEETTTTEEEEEETTS----------------EEEEEETTS---CEEEEEEC---SS
T ss_pred EEEeccC-------CCCCCeEEEEECCCCCEEEEECCCC----------------CEEEEECCC---CEEEEecc---CC
Confidence 5554311 10111122222 456667776543 367777743 22222111 11
Q ss_pred CCCceeeeEEeeccCCCcE-EEEEcCCCCCccCcEEEEecCC
Q psy1098 194 SPRESHTACSWTDEYKNTK-LIIYGGMSGNRLSDLFMLDINS 234 (390)
Q Consensus 194 ~~r~~~~~~~~~~~~~~~~-i~v~GG~~~~~~~~v~~~d~~~ 234 (390)
..-.++...+ +++ +++.|+.+ ..+.+||+.+
T Consensus 205 --~~v~~~~~~~----~~~~~l~s~~~d----~~i~iwd~~~ 236 (383)
T 3ei3_B 205 --AKVTHAEFNP----RCDWLMATSSVD----ATVKLWDLRN 236 (383)
T ss_dssp --SCEEEEEECS----SCTTEEEEEETT----SEEEEEEGGG
T ss_pred --CcEEEEEECC----CCCCEEEEEeCC----CEEEEEeCCC
Confidence 1112233332 444 77787765 4688888876
No 119
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=91.63 E-value=7.1 Score=34.80 Aligned_cols=19 Identities=11% Similarity=0.044 Sum_probs=14.8
Q ss_pred cCceEEeecCCCeeeeccc
Q psy1098 287 SNQLACLHLPEMTWEDLSV 305 (390)
Q Consensus 287 ~~~~~~~d~~~~~W~~v~~ 305 (390)
...++++|+.+.+-+.+..
T Consensus 319 ~~~i~~~d~~~~~~~~l~~ 337 (388)
T 3pe7_A 319 DPFLYVFNMKNGTQHRVAR 337 (388)
T ss_dssp CCEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEeccCCceEEecc
Confidence 3579999999988776654
No 120
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=91.56 E-value=6.4 Score=34.15 Aligned_cols=24 Identities=21% Similarity=0.346 Sum_probs=17.5
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeE
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTW 237 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W 237 (390)
++++++.|+.+ ..+.+||+.+..-
T Consensus 226 ~~~~l~s~s~D----g~i~iwd~~~~~~ 249 (340)
T 4aow_A 226 DGSLCASGGKD----GQAMLWDLNEGKH 249 (340)
T ss_dssp TSSEEEEEETT----CEEEEEETTTTEE
T ss_pred CCCEEEEEeCC----CeEEEEEeccCce
Confidence 67788888876 3578888887653
No 121
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=91.53 E-value=6.7 Score=34.33 Aligned_cols=52 Identities=12% Similarity=0.047 Sum_probs=28.2
Q ss_pred cceEEEECCCCcEEeeeecCCCCCCCceeeEE---EeCCEEEEEcceeCCceeecceEEEEcCcce
Q psy1098 52 EELHVFNTATNQWFIPTLKGDIPPGCAAYGIV---VDNTRVLIFGGMVEYGKYSSDLYELQASKWE 114 (390)
Q Consensus 52 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~---~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~ 114 (390)
..+.+||..+........ ... .-.++. ..++.+++.|+.+ ..+..||..+.+
T Consensus 108 g~v~iwd~~~~~~~~~~~---~~~--~v~~~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~ 162 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQIAQ---HDA--PVKTIHWIKAPNYSCVMTGSWD------KTLKFWDTRSSN 162 (368)
T ss_dssp SEEEEEETTTTEEEEEEE---CSS--CEEEEEEEECSSCEEEEEEETT------SEEEEECSSCSS
T ss_pred CcEEEEEcCCCCceeecc---ccC--ceEEEEEEeCCCCCEEEEccCC------CcEEEEECCCCc
Confidence 357788887776554331 111 112222 2355677777653 347778877654
No 122
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.52 E-value=7.4 Score=38.84 Aligned_cols=109 Identities=7% Similarity=0.057 Sum_probs=57.1
Q ss_pred CCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEE-CCEEEEEcCccCCCCCCCCCCCcc
Q psy1098 86 NTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLI-GNKVYLFGGLANSGGDETKPTPSY 164 (390)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~ 164 (390)
++.|+++||.. +-+++||+.+.++..+.... ......-.++... ++.|++. ...
T Consensus 482 ~g~lWi~~~t~------~Gl~~~d~~~~~~~~~~~~~-----~~~~~~~~~i~~d~~g~lWig-t~~------------- 536 (758)
T 3ott_A 482 EGNVWVLLYNN------KGIDKINPRTREVTKLFADE-----LTGEKSPNYLLCDEDGLLWVG-FHG------------- 536 (758)
T ss_dssp TSCEEEEETTC------SSEEEEETTTTEEEEECTTT-----SCGGGCEEEEEECTTSCEEEE-ETT-------------
T ss_pred CCCEEEEccCC------CCcEEEeCCCCceEEecCCC-----cCCCcccceEEECCCCCEEEE-ecC-------------
Confidence 45788865542 23889999999888764210 1111111222222 4677763 321
Q ss_pred ccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEee
Q psy1098 165 KYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQK 239 (390)
Q Consensus 165 ~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~ 239 (390)
-+.+|+..+ .++.... ...+|... -.++... ++.|++... +.+.+||+.+.+...
T Consensus 537 ----Gl~~~~~~~---~~~~~~~-~~gl~~~~-i~~i~~~-----~g~lWi~t~------~Gl~~~~~~~~~~~~ 591 (758)
T 3ott_A 537 ----GVMRINPKD---ESQQSIS-FGSFSNNE-ILSMTCV-----KNSIWVSTT------NGLWIIDRKTMDARQ 591 (758)
T ss_dssp ----EEEEECC-----CCCCBCC-CCC---CC-EEEEEEE-----TTEEEEEES------SCEEEEETTTCCEEE
T ss_pred ----ceEEEecCC---CceEEec-ccCCCccc-eEEEEEC-----CCCEEEECC------CCeEEEcCCCceeEE
Confidence 267777765 3444322 12233221 1222222 788888763 468999999887765
No 123
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=91.39 E-value=6.3 Score=33.77 Aligned_cols=77 Identities=6% Similarity=-0.035 Sum_probs=39.1
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecC-CCCCCCceeeEEEeCCEEEEE----cceeC-------Cceeecc
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKG-DIPPGCAAYGIVVDNTRVLIF----GGMVE-------YGKYSSD 104 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~-~~p~~r~~~~~~~~~~~iyv~----GG~~~-------~~~~~~~ 104 (390)
++.+|+.... ...+..||+.+++...+.... ..+..+.....+.-++++|+. |.... .......
T Consensus 79 dg~l~v~~~~----~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~ 154 (296)
T 3e5z_A 79 QGHLIACSHG----LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRW 154 (296)
T ss_dssp TCCEEEEETT----TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCE
T ss_pred CCcEEEEecC----CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcE
Confidence 4567665432 245899999888876654210 111111122223335678886 43210 0011246
Q ss_pred eEEEEcCcceeEEe
Q psy1098 105 LYELQASKWEWKRL 118 (390)
Q Consensus 105 v~~~d~~~~~W~~~ 118 (390)
+|++++. .+...+
T Consensus 155 l~~~~~~-g~~~~~ 167 (296)
T 3e5z_A 155 VFRLAPD-GTLSAP 167 (296)
T ss_dssp EEEECTT-SCEEEE
T ss_pred EEEECCC-CCEEEe
Confidence 8999887 444444
No 124
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=91.39 E-value=6.3 Score=34.03 Aligned_cols=65 Identities=11% Similarity=0.070 Sum_probs=35.8
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
++.+++.|+.+ ..+.++|+.+.+-...- .+. .. .-..++.. ++.+++.|+. -.
T Consensus 197 ~~~~l~s~s~D----~~i~iWd~~~~~~~~~~-~~h--~~-~v~~~~~~p~~~~l~s~s~------------------Dg 250 (304)
T 2ynn_A 197 DKPYMITASDD----LTIKIWDYQTKSCVATL-EGH--MS-NVSFAVFHPTLPIIISGSE------------------DG 250 (304)
T ss_dssp TCCEEEEEETT----SEEEEEETTTTEEEEEE-ECC--SS-CEEEEEECSSSSEEEEEET------------------TS
T ss_pred CCCEEEEEcCC----CeEEEEeCCCCccceee-CCC--CC-CEEEEEECCCCCEEEEEcC------------------CC
Confidence 45677777765 46888898876533211 110 01 11122222 4567777775 24
Q ss_pred ceEEeecCCCee
Q psy1098 289 QLACLHLPEMTW 300 (390)
Q Consensus 289 ~~~~~d~~~~~W 300 (390)
.+.++|+.+.+-
T Consensus 251 ~i~iWd~~~~~~ 262 (304)
T 2ynn_A 251 TLKIWNSSTYKV 262 (304)
T ss_dssp CEEEEETTTCCE
T ss_pred eEEEEECCCCce
Confidence 677888877653
No 125
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=91.37 E-value=6.8 Score=34.13 Aligned_cols=71 Identities=8% Similarity=0.060 Sum_probs=40.9
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEE-eCCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVV-DNTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
++.+|+.+... ..+++||+.+.+...+... + ...-.+++. -++++|+..... ......+++||+.+...
T Consensus 55 ~g~l~~~~~~~----~~i~~~d~~~~~~~~~~~~---~-~~~~~~i~~~~dg~l~v~~~~~--~~~~~~i~~~d~~~~~~ 124 (333)
T 2dg1_A 55 QGQLFLLDVFE----GNIFKINPETKEIKRPFVS---H-KANPAAIKIHKDGRLFVCYLGD--FKSTGGIFAATENGDNL 124 (333)
T ss_dssp TSCEEEEETTT----CEEEEECTTTCCEEEEEEC---S-SSSEEEEEECTTSCEEEEECTT--SSSCCEEEEECTTSCSC
T ss_pred CCCEEEEECCC----CEEEEEeCCCCcEEEEeeC---C-CCCcceEEECCCCcEEEEeCCC--CCCCceEEEEeCCCCEE
Confidence 45688776532 4689999998887765421 1 112233433 355777764321 01123588999888765
Q ss_pred EE
Q psy1098 116 KR 117 (390)
Q Consensus 116 ~~ 117 (390)
..
T Consensus 125 ~~ 126 (333)
T 2dg1_A 125 QD 126 (333)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 126
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=91.31 E-value=6 Score=35.34 Aligned_cols=26 Identities=8% Similarity=0.037 Sum_probs=15.8
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCe
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMT 236 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~ 236 (390)
++++++.|+.++ ....+.+||+.+.+
T Consensus 244 ~~~~l~~~~~d~-~~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 244 QGSLLAIAHDSN-SFGCITLYETEFGE 269 (397)
T ss_dssp STTEEEEEEEET-TEEEEEEEETTTCC
T ss_pred CCCEEEEEecCC-CCceEEEEECCCCc
Confidence 566677766431 11358889987664
No 127
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=91.22 E-value=11 Score=36.45 Aligned_cols=127 Identities=13% Similarity=0.168 Sum_probs=65.9
Q ss_pred eeeEEeCCEEEEEccCCCCcccceEEEEC-CCCc--EEeeeecCC--CCCCC---ceeeEEE--eCCE----EEEEccee
Q psy1098 31 HRAVAIKDLMLVFGGGNEGIVEELHVFNT-ATNQ--WFIPTLKGD--IPPGC---AAYGIVV--DNTR----VLIFGGMV 96 (390)
Q Consensus 31 ~~~~~~~~~iyv~GG~~~~~~~~~~~~d~-~~~~--W~~~~~~~~--~p~~r---~~~~~~~--~~~~----iyv~GG~~ 96 (390)
.+-++.++.||+.... ...++.+|. .+++ |+.-..... .+..+ .....+. .+++ ||+....
T Consensus 56 ~tP~v~~g~vyv~~~~----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~d- 130 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSF----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLD- 130 (599)
T ss_dssp SCCEEETTEEEEECST----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTT-
T ss_pred eccEEECCEEEEEeCC----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCC-
Confidence 4456678999988652 346899998 7665 765331100 00011 1122344 4556 7775321
Q ss_pred CCceeecceEEEEcCcc--eeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeee
Q psy1098 97 EYGKYSSDLYELQASKW--EWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLE 174 (390)
Q Consensus 97 ~~~~~~~~v~~~d~~~~--~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d 174 (390)
..++.+|..+. .|+.-.... ........+-++.++.+|+-.+.... .....++.||
T Consensus 131 ------g~l~AlDa~TG~~~W~~~~~~~-----~~~~~~~ssP~v~~g~V~vg~~g~e~-----------g~~g~v~A~D 188 (599)
T 1w6s_A 131 ------GNVAALNAETGETVWKVENSDI-----KVGSTLTIAPYVVKDKVIIGSSGAEL-----------GVRGYLTAYD 188 (599)
T ss_dssp ------SEEEEEETTTCCEEEEEECCCG-----GGTCBCCSCCEEETTEEEECCBCGGG-----------TCCCEEEEEE
T ss_pred ------CEEEEEECCCCCEEEeecCCCC-----CccceeecCCEEECCEEEEEeccccc-----------CCCCeEEEEE
Confidence 34888998665 587532210 00001122334467887764321110 1233588888
Q ss_pred cCCCceeeeec
Q psy1098 175 LKSGHTTVWDM 185 (390)
Q Consensus 175 ~~~~~~~~W~~ 185 (390)
..+.. ..|+.
T Consensus 189 ~~TG~-~~W~~ 198 (599)
T 1w6s_A 189 VKTGE-QVWRA 198 (599)
T ss_dssp TTTCC-EEEEE
T ss_pred CCCCc-EEEEE
Confidence 88754 45865
No 128
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=91.11 E-value=4.7 Score=35.94 Aligned_cols=26 Identities=15% Similarity=0.210 Sum_probs=19.0
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEee
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQK 239 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~ 239 (390)
+++.++.|+.+ ..|.+||+.+.+-..
T Consensus 150 dg~~l~sgs~d----g~v~iwd~~~~~~~~ 175 (357)
T 4g56_B 150 DGTQAVSGGKD----FSVKVWDLSQKAVLK 175 (357)
T ss_dssp SSSEEEEEETT----SCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC----CeEEEEECCCCcEEE
Confidence 67778888776 458889988876443
No 129
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=91.03 E-value=8 Score=34.33 Aligned_cols=96 Identities=10% Similarity=0.026 Sum_probs=51.3
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
++..++.|+.+ ..+.+||+.+.+....-. . ....-.+++.. ++.+++.|+. -.
T Consensus 209 ~g~~l~sgs~D----g~v~~wd~~~~~~~~~~~--~--h~~~v~~v~~~p~~~~l~s~s~------------------D~ 262 (354)
T 2pbi_B 209 TGNTFVSGGCD----KKAMVWDMRSGQCVQAFE--T--HESDVNSVRYYPSGDAFASGSD------------------DA 262 (354)
T ss_dssp SCCEEEEEETT----SCEEEEETTTCCEEEEEC--C--CSSCEEEEEECTTSSEEEEEET------------------TS
T ss_pred CCCEEEEEeCC----CeEEEEECCCCcEEEEec--C--CCCCeEEEEEeCCCCEEEEEeC------------------CC
Confidence 35678888876 468899988776543210 0 11111122222 5667777775 34
Q ss_pred ceEEeecCCCeeeecccccccCCCCCCCCCcceeee--CCEEEEEeccCCc
Q psy1098 289 QLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVI--NSRMYIWSGRDDY 337 (390)
Q Consensus 289 ~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~ 337 (390)
.+.+||+.+.+-..+-. .........++.+ ++++++.|+.++.
T Consensus 263 ~v~lwd~~~~~~~~~~~------~~~~~~~~~~~~~s~~g~~l~~g~~d~~ 307 (354)
T 2pbi_B 263 TCRLYDLRADREVAIYS------KESIIFGASSVDFSLSGRLLFAGYNDYT 307 (354)
T ss_dssp CEEEEETTTTEEEEEEC------CTTCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred eEEEEECCCCcEEEEEc------CCCcccceeEEEEeCCCCEEEEEECCCc
Confidence 67788887764222211 1111222333333 5778888877654
No 130
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=90.91 E-value=9.5 Score=35.01 Aligned_cols=147 Identities=9% Similarity=0.051 Sum_probs=74.2
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEE-EeCCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIV-VDNTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
++.+++.|+.+ ..+.+||..+.+-.... ..... .-.+++ ..++..++.|+.+ ..+..||..+.+-
T Consensus 279 ~~~~l~~~~~d----~~i~vwd~~~~~~~~~~---~~~~~-~v~~~~~~~~~~~l~sg~~d------g~i~vwd~~~~~~ 344 (464)
T 3v7d_B 279 HGNIVVSGSYD----NTLIVWDVAQMKCLYIL---SGHTD-RIYSTIYDHERKRCISASMD------TTIRIWDLENGEL 344 (464)
T ss_dssp ETTEEEEEETT----SCEEEEETTTTEEEEEE---CCCSS-CEEEEEEETTTTEEEEEETT------SCEEEEETTTTEE
T ss_pred CCCEEEEEeCC----CeEEEEECCCCcEEEEe---cCCCC-CEEEEEEcCCCCEEEEEeCC------CcEEEEECCCCcE
Confidence 34455556533 35888998776543322 11111 112222 2344566666653 3477888877643
Q ss_pred EEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCCC
Q psy1098 116 KRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSP 195 (390)
Q Consensus 116 ~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~ 195 (390)
...-. .....-.+..+++..++.|+.++ .+..+|+.+.. ..+... .. .
T Consensus 345 ~~~~~---------~h~~~v~~~~~~~~~l~s~s~dg----------------~v~vwd~~~~~-~~~~~~-----~~-~ 392 (464)
T 3v7d_B 345 MYTLQ---------GHTALVGLLRLSDKFLVSAAADG----------------SIRGWDANDYS-RKFSYH-----HT-N 392 (464)
T ss_dssp EEEEC---------CCSSCEEEEEECSSEEEEEETTS----------------EEEEEETTTCC-EEEEEE-----CT-T
T ss_pred EEEEe---------CCCCcEEEEEEcCCEEEEEeCCC----------------cEEEEECCCCc-eeeeec-----CC-C
Confidence 22211 11122234445666666766554 26777777542 222221 01 1
Q ss_pred CceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEee
Q psy1098 196 RESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQK 239 (390)
Q Consensus 196 r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~ 239 (390)
.....+... ++++++.|+ + ..+.+||+.+.+-..
T Consensus 393 ~~~~~~~~~-----~~~~l~~~~-d----g~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 393 LSAITTFYV-----SDNILVSGS-E----NQFNIYNLRSGKLVH 426 (464)
T ss_dssp CCCEEEEEE-----CSSEEEEEE-T----TEEEEEETTTCCEEE
T ss_pred CccEEEEEe-----CCCEEEEec-C----CeEEEEECCCCcEEe
Confidence 111222222 666777776 3 468999998876554
No 131
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=90.89 E-value=10 Score=35.34 Aligned_cols=58 Identities=16% Similarity=0.174 Sum_probs=37.6
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCC-CCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcc
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIP-PGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKW 113 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~ 113 (390)
++++|+|-| +..|.||..+++..... .| .+... ++....+++|+|-|. ..|+||..+.
T Consensus 158 ~~~~yfFkG------~~yw~yd~~~~~~~~~~----w~gi~~iD-AA~~~~g~~YfFkG~--------~y~rfd~~~~ 216 (460)
T 1qhu_A 158 DEGILFFQG------NRKWFWDLTTGTKKERS----WPAVGNCT-SALRWLGRYYCFQGN--------QFLRFNPVSG 216 (460)
T ss_dssp SSEEEEEET------TEEEEEETTTTEEEEEC----CTTSCCCS-EEEEETTEEEEEETT--------EEEEECTTTC
T ss_pred CCeEEEEec------ccEEEEecccceeeccc----CCCCCccc-hheeeCCceEEEECC--------EEEEEcCccC
Confidence 678999998 56899999877654321 21 22233 333446899999775 3777876554
No 132
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=90.83 E-value=7.9 Score=33.93 Aligned_cols=231 Identities=11% Similarity=0.085 Sum_probs=108.7
Q ss_pred cceEEEECCCCcEEeeeecCCCCCCCceeeEEEe-CCEEEEEcceeCCceeecceEEEEcCcc--eeEEecCCCCCCCCC
Q psy1098 52 EELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVD-NTRVLIFGGMVEYGKYSSDLYELQASKW--EWKRLKPKPPRFGSP 128 (390)
Q Consensus 52 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~--~W~~~~~~~~~~~~~ 128 (390)
..+..+|+.+.+.......+.+ ..-+.+++. +++||+..... ..|.+||+... .-..+.... ..+..
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~---~~p~gia~d~~g~l~v~d~~~------~~v~~~~~~g~~~~~~~~~~~~-~~g~~ 138 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLF---YLPHGLSIDTDGNYWVTDVAL------HQVFKLDPHSKEGPLLILGRSM-QPGSD 138 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTC---SSEEEEEECTTSCEEEEETTT------TEEEEECTTCSSCCSEEESBTT-BCCCS
T ss_pred CcEEEEECCCCeEEeccCCCcc---CCceEEEECCCCCEEEEECCC------CEEEEEeCCCCeEEEEEecccC-CCCCC
Confidence 3689999987776543321111 122333333 56788875431 45888888655 222232100 00100
Q ss_pred CCCCccc-eEEEE--CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCC----CCCCc-eee
Q psy1098 129 PCPRLGH-SFTLI--GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGL----PSPRE-SHT 200 (390)
Q Consensus 129 p~~r~~~-~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~----p~~r~-~~~ 200 (390)
....... .++.. ++.+|+..+... +.+.+|+.... .-..+...+.. +.... -+.
T Consensus 139 ~~~~~~P~~ia~~~~~g~lyv~d~~~~---------------~~I~~~~~~g~---~~~~~~~~g~~~~~~~~~~~~p~g 200 (329)
T 3fvz_A 139 QNHFCQPTDVAVEPSTGAVFVSDGYCN---------------SRIVQFSPSGK---FVTQWGEESSGSSPRPGQFSVPHS 200 (329)
T ss_dssp TTCCSSEEEEEECTTTCCEEEEECSSC---------------CEEEEECTTSC---EEEEECEECCSSSCCTTEESCEEE
T ss_pred ccccCCCcEEEEeCCCCeEEEEeCCCC---------------CeEEEEcCCCC---EEEEeccCCCCCCCCCcccCCCcE
Confidence 1111122 23332 578999865221 13777775431 11111111111 11111 133
Q ss_pred eEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCcccCCCccccccc
Q psy1098 201 ACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRSLH 280 (390)
Q Consensus 201 ~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~ 280 (390)
++..+ .++.+|+..... +.|.+||+.+.+..... ........-.+.+...+.+|...|........
T Consensus 201 ia~d~---~~g~l~v~d~~~----~~I~~~~~~~G~~~~~~--~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~----- 266 (329)
T 3fvz_A 201 LALVP---HLDQLCVADREN----GRIQCFKTDTKEFVREI--KHASFGRNVFAISYIPGFLFAVNGKPYFGDQE----- 266 (329)
T ss_dssp EEEET---TTTEEEEEETTT----TEEEEEETTTCCEEEEE--CCTTTTTCEEEEEEETTEEEEEECCCCTTCSC-----
T ss_pred EEEEC---CCCEEEEEECCC----CEEEEEECCCCcEEEEE--eccccCCCcceeeecCCEEEEeCCCEEeccCC-----
Confidence 33332 138999987543 57899999866654421 11112222234444457777777653322111
Q ss_pred cccceecCceEEeecCCCeeeecccccccCCCCCCCCCcceeee--CCEEEEEeccC
Q psy1098 281 EKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVI--NSRMYIWSGRD 335 (390)
Q Consensus 281 ~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~ 335 (390)
...+.++|+.+.+....-.. .+........+.+ ++.|||....+
T Consensus 267 ------~~~v~~~~~~~g~~~~~~~~-----~~~~~~~p~~ia~~~dG~lyvad~~~ 312 (329)
T 3fvz_A 267 ------PVQGFVMNFSSGEIIDVFKP-----VRKHFDMPHDIVASEDGTVYIGDAHT 312 (329)
T ss_dssp ------CCCEEEEETTTCCEEEEECC-----SSSCCSSEEEEEECTTSEEEEEESSS
T ss_pred ------CcEEEEEEcCCCeEEEEEcC-----CCCccCCeeEEEECCCCCEEEEECCC
Confidence 35788899877765443110 1111111222333 56888887554
No 133
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=90.75 E-value=7.9 Score=36.93 Aligned_cols=55 Identities=13% Similarity=0.106 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGW 268 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~ 268 (390)
++..++.++.+ ..+.+||+.+.+-.........+......+++..++..++.|+.
T Consensus 263 ~~~~l~~~~~d----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 317 (615)
T 1pgu_A 263 DSQKFATVGAD----ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSL 317 (615)
T ss_dssp SSSEEEEEETT----SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEET
T ss_pred CCCEEEEEcCC----CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEEC
Confidence 45566666654 46888998877644422111111111222333335666666664
No 134
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=90.39 E-value=14 Score=35.94 Aligned_cols=72 Identities=17% Similarity=0.091 Sum_probs=41.0
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeE-EEECCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTA-CVIGDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~-~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
++++++.+.. + ...+|.+|+.+...+.+.. +. ...... ..-++.+++..+... ...
T Consensus 304 ~~~~~~~~~~-~--~~~l~~~d~~~~~~~~l~~----~~-~~~~~~~s~~~~~~~~~~~~~~---------------~~~ 360 (662)
T 3azo_A 304 NGLIAVVHGK-G--AAVLGILDPESGELVDAAG----PW-TEWAATLTVSGTRAVGVAASPR---------------TAY 360 (662)
T ss_dssp TSCEEEEEBS-S--SCEEEEEETTTTEEEECCS----SC-CEEEEEEEEETTEEEEEEEETT---------------EEE
T ss_pred CCEEEEEEEc-C--ccEEEEEECCCCcEEEecC----CC-CeEEEEEecCCCEEEEEEcCCC---------------CCC
Confidence 5666666654 2 3578899998887766431 11 111222 334566666544311 034
Q ss_pred ceEEeecCCCeeeecc
Q psy1098 289 QLACLHLPEMTWEDLS 304 (390)
Q Consensus 289 ~~~~~d~~~~~W~~v~ 304 (390)
.++.+|+.+.+.+.+.
T Consensus 361 ~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 361 EVVELDTVTGRARTIG 376 (662)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCceEEee
Confidence 7888888777766653
No 135
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=90.23 E-value=19 Score=38.08 Aligned_cols=95 Identities=9% Similarity=0.051 Sum_probs=50.6
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCcccCCCccccccccccceecCc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSNQ 289 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~ 289 (390)
+++.++.|+.+ ..+.+||+.+.....+. .....-.++....+..++.|+. -..
T Consensus 1014 dg~~l~s~~~d----g~i~vwd~~~~~~~~~~-----~~~~~v~~~~~~~~~~l~~~~~------------------dg~ 1066 (1249)
T 3sfz_A 1014 DGKTLISSSED----SVIQVWNWQTGDYVFLQ-----AHQETVKDFRLLQDSRLLSWSF------------------DGT 1066 (1249)
T ss_dssp SSSCEEEECSS----SBEEEEETTTTEEECCB-----CCSSCEEEEEECSSSEEEEEES------------------SSE
T ss_pred CCCEEEEEcCC----CEEEEEECCCCceEEEe-----cCCCcEEEEEEcCCCcEEEEEC------------------CCc
Confidence 66777787765 46889999888766522 1112222333334444555554 356
Q ss_pred eEEeecCCCeeeecccccccCCCCCCCCCcceeeeCCEEEEEeccCCc
Q psy1098 290 LACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVINSRMYIWSGRDDY 337 (390)
Q Consensus 290 ~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~ 337 (390)
+.++|+.+.+-...-. .........+..-++++++.|+.++.
T Consensus 1067 v~vwd~~~~~~~~~~~------~~~~~v~~~~~s~d~~~l~s~s~d~~ 1108 (1249)
T 3sfz_A 1067 VKVWNVITGRIERDFT------CHQGTVLSCAISSDATKFSSTSADKT 1108 (1249)
T ss_dssp EEEEETTTTCCCEEEE------CCSSCCCCEEECSSSSSCEEECCSSC
T ss_pred EEEEECCCCceeEEEc------ccCCcEEEEEECCCCCEEEEEcCCCc
Confidence 8888887765322211 11111212222235667777777644
No 136
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=90.08 E-value=7.6 Score=35.55 Aligned_cols=22 Identities=14% Similarity=0.089 Sum_probs=15.5
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSM 235 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~ 235 (390)
++.+++.|+.+ ..|.+||+.+.
T Consensus 243 ~~~~l~s~~~d----g~i~i~d~~~~ 264 (430)
T 2xyi_A 243 HESLFGSVADD----QKLMIWDTRNN 264 (430)
T ss_dssp CTTEEEEEETT----SEEEEEETTCS
T ss_pred CCCEEEEEeCC----CeEEEEECCCC
Confidence 45677777655 46889998865
No 137
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=90.04 E-value=7.3 Score=37.24 Aligned_cols=62 Identities=10% Similarity=0.048 Sum_probs=34.8
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEE--eCCEEEEEcceeCCceeecceEEEEc--Cc
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVV--DNTRVLIFGGMVEYGKYSSDLYELQA--SK 112 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~~d~--~~ 112 (390)
++.+|+.+.. ...+.++|..+.+....-..+ ..-|.++. .+..||+.+ .. ..|..||+ .+
T Consensus 148 ~~~~~vs~~~----d~~V~v~D~~t~~~~~~i~~g-----~~~~~v~~spdg~~l~v~~-~d------~~V~v~D~~~~t 211 (543)
T 1nir_A 148 PNLFSVTLRD----AGQIALVDGDSKKIVKVIDTG-----YAVHISRMSASGRYLLVIG-RD------ARIDMIDLWAKE 211 (543)
T ss_dssp GGEEEEEEGG----GTEEEEEETTTCCEEEEEECS-----TTEEEEEECTTSCEEEEEE-TT------SEEEEEETTSSS
T ss_pred CCEEEEEEcC----CCeEEEEECCCceEEEEEecC-----cccceEEECCCCCEEEEEC-CC------CeEEEEECcCCC
Confidence 5678877653 245788899887754322111 11344433 234566654 21 45888998 55
Q ss_pred ce
Q psy1098 113 WE 114 (390)
Q Consensus 113 ~~ 114 (390)
.+
T Consensus 212 ~~ 213 (543)
T 1nir_A 212 PT 213 (543)
T ss_dssp CE
T ss_pred Cc
Confidence 54
No 138
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=89.99 E-value=8.9 Score=33.18 Aligned_cols=64 Identities=19% Similarity=0.213 Sum_probs=35.8
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
...+++.|+.+ ..+.+||+.+.+-..... + ....-.+++.. ++++++.|+. -.
T Consensus 184 ~~~~~~s~~~d----~~i~i~d~~~~~~~~~~~-~---h~~~v~~~~~s~~~~~l~s~s~------------------Dg 237 (340)
T 4aow_A 184 SNPIIVSCGWD----KLVKVWNLANCKLKTNHI-G---HTGYLNTVTVSPDGSLCASGGK------------------DG 237 (340)
T ss_dssp SSCEEEEEETT----SCEEEEETTTTEEEEEEC-C---CSSCEEEEEECTTSSEEEEEET------------------TC
T ss_pred CCcEEEEEcCC----CEEEEEECCCCceeeEec-C---CCCcEEEEEECCCCCEEEEEeC------------------CC
Confidence 44566677665 457888988776544211 1 11111122222 5677787775 24
Q ss_pred ceEEeecCCCe
Q psy1098 289 QLACLHLPEMT 299 (390)
Q Consensus 289 ~~~~~d~~~~~ 299 (390)
.+.+||+.+.+
T Consensus 238 ~i~iwd~~~~~ 248 (340)
T 4aow_A 238 QAMLWDLNEGK 248 (340)
T ss_dssp EEEEEETTTTE
T ss_pred eEEEEEeccCc
Confidence 67778877654
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=89.98 E-value=8.9 Score=33.17 Aligned_cols=18 Identities=0% Similarity=0.043 Sum_probs=12.1
Q ss_pred CceEEeecC--CCeeeeccc
Q psy1098 288 NQLACLHLP--EMTWEDLSV 305 (390)
Q Consensus 288 ~~~~~~d~~--~~~W~~v~~ 305 (390)
..+.+||+. +.+++.+..
T Consensus 253 ~~i~v~d~~~~~~~~~~~~~ 272 (343)
T 1ri6_A 253 SLITVFSVSEDGSVLSKEGF 272 (343)
T ss_dssp TEEEEEEECTTSCCEEEEEE
T ss_pred CEEEEEEEcCCCCceEEeee
Confidence 567788877 556666654
No 140
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=89.95 E-value=6.2 Score=41.82 Aligned_cols=68 Identities=10% Similarity=0.022 Sum_probs=34.4
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcceeE
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKWEWK 116 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~ 116 (390)
++..++.|+.+ ..+.+||..+....... .............-+++.++.|+.+ ..+..+|..+....
T Consensus 972 ~g~~l~~g~~~----g~i~i~d~~~~~~~~~~---~~h~~~v~~l~~s~dg~~l~s~~~d------g~i~vwd~~~~~~~ 1038 (1249)
T 3sfz_A 972 HLEYVAFGDED----GAIKIIELPNNRVFSSG---VGHKKAVRHIQFTADGKTLISSSED------SVIQVWNWQTGDYV 1038 (1249)
T ss_dssp TSSEEEEEETT----SCCEEEETTTTSCEEEC---CCCSSCCCCEEECSSSSCEEEECSS------SBEEEEETTTTEEE
T ss_pred CCCEEEEEcCC----CCEEEEEcCCCceeeec---ccCCCceEEEEECCCCCEEEEEcCC------CEEEEEECCCCceE
Confidence 44556666533 35788888766543321 1111111111122345566666653 34778888877654
Q ss_pred E
Q psy1098 117 R 117 (390)
Q Consensus 117 ~ 117 (390)
.
T Consensus 1039 ~ 1039 (1249)
T 3sfz_A 1039 F 1039 (1249)
T ss_dssp C
T ss_pred E
Confidence 3
No 141
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=89.86 E-value=14 Score=35.19 Aligned_cols=64 Identities=6% Similarity=0.074 Sum_probs=35.6
Q ss_pred EEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCC-CCceeeEEEE-C-CEEEEEcCcccCCCccccccccccceecCc
Q psy1098 213 LIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPL-PRSLHTACVI-G-DRMFIFGGWVPILKDESRSLHEKEWKCSNQ 289 (390)
Q Consensus 213 i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~-~r~~~~~~~~-~-~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~ 289 (390)
+++.|+.+ ..+.+||+.+.+-...- ..... ...-.+++.. + ++.++.|+. -..
T Consensus 175 ~l~~~~~d----~~v~vwd~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~------------------dg~ 230 (615)
T 1pgu_A 175 RSMTVGDD----GSVVFYQGPPFKFSASD--RTHHKQGSFVRDVEFSPDSGEFVITVGS------------------DRK 230 (615)
T ss_dssp EEEEEETT----TEEEEEETTTBEEEEEE--CSSSCTTCCEEEEEECSTTCCEEEEEET------------------TCC
T ss_pred EEEEEeCC----CcEEEEeCCCcceeeee--cccCCCCceEEEEEECCCCCCEEEEEeC------------------CCe
Confidence 67777665 46888888776543311 11111 0012223333 4 677777765 357
Q ss_pred eEEeecCCCee
Q psy1098 290 LACLHLPEMTW 300 (390)
Q Consensus 290 ~~~~d~~~~~W 300 (390)
+.+||+.+.+.
T Consensus 231 i~vwd~~~~~~ 241 (615)
T 1pgu_A 231 ISCFDGKSGEF 241 (615)
T ss_dssp EEEEETTTCCE
T ss_pred EEEEECCCCCE
Confidence 88899877653
No 142
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=89.83 E-value=8.4 Score=32.64 Aligned_cols=190 Identities=12% Similarity=0.038 Sum_probs=92.2
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEe-CCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVD-NTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
++.+|+.... ...++.||+. .....+... .....-+.++.. +++||+.... ...++++|+ +.+.
T Consensus 67 ~g~l~v~~~~----~~~i~~~~~~-g~~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g~~ 131 (299)
T 2z2n_A 67 DGEVWFTENA----ANKIGRITKK-GIIKEYTLP---NPDSAPYGITEGPNGDIWFTEMN------GNRIGRITD-DGKI 131 (299)
T ss_dssp TSCEEEEETT----TTEEEEECTT-SCEEEEECS---STTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TCCE
T ss_pred CCCEEEeCCC----CCeEEEECCC-CcEEEEeCC---CcCCCceeeEECCCCCEEEEecC------CceEEEECC-CCCE
Confidence 4567776432 2348888886 455544411 112223444444 4678876432 134788888 4444
Q ss_pred EEecCCCCCCCCCCCCCccceEEEE-CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCC
Q psy1098 116 KRLKPKPPRFGSPPCPRLGHSFTLI-GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPS 194 (390)
Q Consensus 116 ~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~ 194 (390)
..+.... ....-..++.. ++.+|+..... +.++++|. +. +...+.......
T Consensus 132 ~~~~~~~-------~~~~~~~i~~~~~g~l~v~~~~~----------------~~i~~~~~-~g---~~~~~~~~~~~~- 183 (299)
T 2z2n_A 132 REYELPN-------KGSYPSFITLGSDNALWFTENQN----------------NAIGRITE-SG---DITEFKIPTPAS- 183 (299)
T ss_dssp EEEECSS-------TTCCEEEEEECTTSCEEEEETTT----------------TEEEEECT-TC---CEEEEECSSTTC-
T ss_pred EEecCCC-------CCCCCceEEEcCCCCEEEEeCCC----------------CEEEEEcC-CC---cEEEeeCCCCCC-
Confidence 4443210 11122233333 46788753211 23778887 42 332221111111
Q ss_pred CCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE--CCEEEEEcCcccCC
Q psy1098 195 PRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI--GDRMFIFGGWVPIL 272 (390)
Q Consensus 195 ~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~ 272 (390)
.-..++..+ ++++|+..... ..+.+||+ +.+...... +........+.. ++++|+....
T Consensus 184 --~~~~i~~~~----~g~l~v~~~~~----~~i~~~~~-~g~~~~~~~----~~~~~~~~~i~~~~~g~l~v~~~~---- 244 (299)
T 2z2n_A 184 --GPVGITKGN----DDALWFVEIIG----NKIGRITT-SGEITEFKI----PTPNARPHAITAGAGIDLWFTEWG---- 244 (299)
T ss_dssp --CEEEEEECT----TSSEEEEETTT----TEEEEECT-TCCEEEEEC----SSTTCCEEEEEECSTTCEEEEETT----
T ss_pred --cceeEEECC----CCCEEEEccCC----ceEEEECC-CCcEEEEEC----CCCCCCceeEEECCCCCEEEeccC----
Confidence 112233321 56788775332 46889998 666655321 111112223333 5678877521
Q ss_pred CccccccccccceecCceEEeecCCCeeeec
Q psy1098 273 KDESRSLHEKEWKCSNQLACLHLPEMTWEDL 303 (390)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v 303 (390)
...+.+||+ +.+...+
T Consensus 245 --------------~~~i~~~d~-~g~~~~~ 260 (299)
T 2z2n_A 245 --------------ANKIGRLTS-NNIIEEY 260 (299)
T ss_dssp --------------TTEEEEEET-TTEEEEE
T ss_pred --------------CceEEEECC-CCceEEE
Confidence 357888998 4454444
No 143
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=89.80 E-value=8.8 Score=32.82 Aligned_cols=66 Identities=8% Similarity=0.086 Sum_probs=38.5
Q ss_pred CEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEE-eCCEEEEEcceeCCceeecceEEEEcCcceeE
Q psy1098 38 DLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVV-DNTRVLIFGGMVEYGKYSSDLYELQASKWEWK 116 (390)
Q Consensus 38 ~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~ 116 (390)
+.+|+.+... ..++.||+.+. ...+.. +.. .-.+++. -++++|+.... ...+++||+.+.+..
T Consensus 40 ~~l~~~~~~~----~~i~~~~~~~~-~~~~~~----~~~-~~~~l~~~~dg~l~v~~~~------~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 40 SAVIFSDVRQ----NRTWAWSDDGQ-LSPEMH----PSH-HQNGHCLNKQGHLIACSHG------LRRLERQREPGGEWE 103 (296)
T ss_dssp TEEEEEEGGG----TEEEEEETTSC-EEEEES----SCS-SEEEEEECTTCCEEEEETT------TTEEEEECSTTCCEE
T ss_pred CEEEEEeCCC----CEEEEEECCCC-eEEEEC----CCC-CcceeeECCCCcEEEEecC------CCeEEEEcCCCCcEE
Confidence 3478777533 45899999887 555442 221 1233333 35667765421 134888998777766
Q ss_pred Eec
Q psy1098 117 RLK 119 (390)
Q Consensus 117 ~~~ 119 (390)
.+.
T Consensus 104 ~~~ 106 (296)
T 3e5z_A 104 SIA 106 (296)
T ss_dssp EEE
T ss_pred EEe
Confidence 553
No 144
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=89.79 E-value=16 Score=35.89 Aligned_cols=232 Identities=7% Similarity=-0.036 Sum_probs=104.1
Q ss_pred eCCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCC---ceeeEEEeCCEEEEEcceeCCceeecceEEEEcCc
Q psy1098 36 IKDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGC---AAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASK 112 (390)
Q Consensus 36 ~~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~ 112 (390)
-++++|.+--...+....+|+.+.....|+.+.....+.... ......+-+++.+++.-... +.-...++++|..+
T Consensus 78 dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~-G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 78 RNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPN-AADEAVLHVIDVDS 156 (695)
T ss_dssp ETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEET-TCSCCEEEEEETTT
T ss_pred ECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCC-CCceEEEEEEECCC
Confidence 356666654333334566788888777888776321111111 11111223455555543321 11124689999988
Q ss_pred ceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCC
Q psy1098 113 WEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGL 192 (390)
Q Consensus 113 ~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~ 192 (390)
.+...... .+.......+-.-+++.++++......... ...-.....++.+++.+..... ..+... .
T Consensus 157 g~~~~~~~-------~~~~~~~~~~wspDg~~l~~~~~d~~~~~~---~~~~~~~~~v~~~~l~t~~~~~-~lv~~~--~ 223 (695)
T 2bkl_A 157 GEWSKVDV-------IEGGKYATPKWTPDSKGFYYEWLPTDPSIK---VDERPGYTTIRYHTLGTEPSKD-TVVHER--T 223 (695)
T ss_dssp CCBCSSCC-------BSCCTTCCCEECTTSSEEEEEECCCCTTSC---GGGGGGGCEEEEEETTSCGGGC-EEEECC--C
T ss_pred CCCcCCcc-------cCcccccceEEecCCCEEEEEEecCCCCCc---cccCCCCCEEEEEECCCCchhc-eEEEec--C
Confidence 76531101 111111111222255555555443211000 0000234458888877643110 111101 1
Q ss_pred CCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCcccCC
Q psy1098 193 PSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPIL 272 (390)
Q Consensus 193 p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~ 272 (390)
..+.........+ +++.+++....+....+++.++..+..++.+.... .. ....+..++.+|+......
T Consensus 224 ~~~~~~~~~~~Sp----DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~----~~-~~~~~~~~g~l~~~s~~~~-- 292 (695)
T 2bkl_A 224 GDPTTFLQSDLSR----DGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGV----GA-KYEVHAWKDRFYVLTDEGA-- 292 (695)
T ss_dssp CCTTCEEEEEECT----TSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECS----SC-CEEEEEETTEEEEEECTTC--
T ss_pred CCCEEEEEEEECC----CCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCC----Cc-eEEEEecCCcEEEEECCCC--
Confidence 1111222222322 45545554332212357888887777777754211 11 1222235666555533210
Q ss_pred CccccccccccceecCceEEeecCCCe---eeeccc
Q psy1098 273 KDESRSLHEKEWKCSNQLACLHLPEMT---WEDLSV 305 (390)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~d~~~~~---W~~v~~ 305 (390)
....++++|+.+.. |+.+-.
T Consensus 293 -------------~~~~l~~~d~~~~~~~~~~~l~~ 315 (695)
T 2bkl_A 293 -------------PRQRVFEVDPAKPARASWKEIVP 315 (695)
T ss_dssp -------------TTCEEEEEBTTBCSGGGCEEEEC
T ss_pred -------------CCCEEEEEeCCCCCccCCeEEec
Confidence 03578889987654 777653
No 145
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=89.77 E-value=7.6 Score=34.46 Aligned_cols=25 Identities=12% Similarity=0.049 Sum_probs=17.2
Q ss_pred cEEEEEcCCCCCccCcEEEEecCCCeEee
Q psy1098 211 TKLIIYGGMSGNRLSDLFMLDINSMTWQK 239 (390)
Q Consensus 211 ~~i~v~GG~~~~~~~~v~~~d~~~~~W~~ 239 (390)
.++++.|+.+ ..|.+||..+.+-..
T Consensus 270 ~~~lasgs~D----~~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 270 VPFLASLSED----CSLAVLDSSLSELFR 294 (344)
T ss_dssp SCCEEEEETT----SCEEEECTTCCEEEE
T ss_pred CeEEEEEeCC----CeEEEEECCCCcEEE
Confidence 4677777766 458889988775433
No 146
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=89.64 E-value=8.7 Score=32.55 Aligned_cols=190 Identities=13% Similarity=0.078 Sum_probs=92.0
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEe-CCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVD-NTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
++.+|+.... ...+..||+. ++...+... .....-+.++.. ++++|+.... ...+++||+. .+.
T Consensus 72 ~g~l~v~~~~----~~~v~~~d~~-g~~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 72 LGDIWFTENG----ANKIGKLSKK-GGFTEYPLP---QPDSGPYGITEGLNGDIWFTQLN------GDRIGKLTAD-GTI 136 (300)
T ss_dssp TSCEEEEETT----TTEEEEECTT-SCEEEEECS---STTCCEEEEEECSTTCEEEEETT------TTEEEEECTT-SCE
T ss_pred CCCEEEEecC----CCeEEEECCC-CCeEEecCC---CCCCCCccceECCCCCEEEEccC------CCeEEEECCC-CCE
Confidence 4567776432 2458889987 666655421 111223444443 5678876432 1347888887 544
Q ss_pred EEecCCCCCCCCCCCCCccceEEEE-CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCC
Q psy1098 116 KRLKPKPPRFGSPPCPRLGHSFTLI-GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPS 194 (390)
Q Consensus 116 ~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~ 194 (390)
..+.. + .....-+.++.. ++++|+..... ..+++++. +. +...+.......
T Consensus 137 ~~~~~-~------~~~~~~~~i~~d~~g~l~v~~~~~----------------~~i~~~~~-~g---~~~~~~~~~~~~- 188 (300)
T 2qc5_A 137 YEYDL-P------NKGSYPAFITLGSDNALWFTENQN----------------NSIGRITN-TG---KLEEYPLPTNAA- 188 (300)
T ss_dssp EEEEC-S------STTCCEEEEEECTTSSEEEEETTT----------------TEEEEECT-TC---CEEEEECSSTTC-
T ss_pred EEccC-C------CCCCCceeEEECCCCCEEEEecCC----------------CeEEEECC-CC---cEEEeeCCCCCC-
Confidence 44321 1 011112233332 46677753211 13777877 32 232221111111
Q ss_pred CCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE--CCEEEEEcCcccCC
Q psy1098 195 PRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI--GDRMFIFGGWVPIL 272 (390)
Q Consensus 195 ~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~ 272 (390)
.-..++.. .++.+|+..... ..+.+||+ +.+...... +........+.. +++||+....
T Consensus 189 --~~~~i~~d----~~g~l~v~~~~~----~~i~~~~~-~g~~~~~~~----~~~~~~~~~i~~d~~g~l~v~~~~---- 249 (300)
T 2qc5_A 189 --APVGITSG----NDGALWFVEIMG----NKIGRITT-TGEISEYDI----PTPNARPHAITAGKNSEIWFTEWG---- 249 (300)
T ss_dssp --CEEEEEEC----TTSSEEEEETTT----TEEEEECT-TCCEEEEEC----SSTTCCEEEEEECSTTCEEEEETT----
T ss_pred --CcceEEEC----CCCCEEEEccCC----CEEEEEcC-CCcEEEEEC----CCCCCCceEEEECCCCCEEEeccC----
Confidence 11222222 156788765322 46889998 555554321 111122223333 5678887532
Q ss_pred CccccccccccceecCceEEeecCCCeeeec
Q psy1098 273 KDESRSLHEKEWKCSNQLACLHLPEMTWEDL 303 (390)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v 303 (390)
...+.+||+ +.+....
T Consensus 250 --------------~~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 250 --------------ANQIGRITN-DNTIQEY 265 (300)
T ss_dssp --------------TTEEEEECT-TSCEEEE
T ss_pred --------------CCeEEEECC-CCcEEEE
Confidence 357888988 4555544
No 147
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=89.64 E-value=12 Score=34.05 Aligned_cols=205 Identities=15% Similarity=0.229 Sum_probs=101.3
Q ss_pred CcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCC
Q psy1098 111 SKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYG 190 (390)
Q Consensus 111 ~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~ 190 (390)
....|++-.. +..|....-|+.+.+++.-|++|=-+++..+ +-..-++.-+........-.+. ...
T Consensus 268 ~~spW~~t~L-----~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~P--------Re~G~~yfs~~~~sp~~~vrr~-i~s 333 (670)
T 3ju4_A 268 HKSPWRKTDL-----GLIPSVTEVHSFATIDNNGFAMGYHQGDVAP--------REVGLFYFPDAFNSPSNYVRRQ-IPS 333 (670)
T ss_dssp TTSCCEEEEC-----CSCTTCSEEEEEEECSSSCEEEEEEECSSSS--------CEEEEEEETTTTTCTTCCEEEE-CCG
T ss_pred ccCCceeccc-----ccccceeeeeeeeEecCCceEEEeccCCCCc--------ceeeEEEecccccCCcceeeee-chh
Confidence 3445655433 2345667788899998877788654443211 2222222222222111111111 111
Q ss_pred CCCCCCceeeeEEeeccCCCcEEEEEc-CCCCCc-cCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCc
Q psy1098 191 GLPSPRESHTACSWTDEYKNTKLIIYG-GMSGNR-LSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGW 268 (390)
Q Consensus 191 ~~p~~r~~~~~~~~~~~~~~~~i~v~G-G~~~~~-~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~ 268 (390)
.....-+..+.-.+ ++++|++- |..+.+ =..+.+-+.....|+.+... -..-....-.+.+++.|||||-.
T Consensus 334 ey~~~AsEPCvkyY-----dgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp--~nvHhtnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 334 EYEPDASEPCIKYY-----DGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFP--HNVHHTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp GGCTTEEEEEEEEE-----TTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECT--TCCCSSCCCEEEETTEEEEEEEC
T ss_pred hhccccccchhhhh-----CCEEEEEecCcCCCCCcceeeeecccCCchhheecc--ccccccCCCcceeCCEEEEEecc
Confidence 22222233444556 89999885 433333 35577778788889997542 22223445677889999999854
Q ss_pred ccCC--CccccccccccceecCceE-E-----eecCCCeeeecccccccCCCCCCCCCcceeee-CCEE-EEEeccCCc
Q psy1098 269 VPIL--KDESRSLHEKEWKCSNQLA-C-----LHLPEMTWEDLSVEVTDDFLPKPRAGHCASVI-NSRM-YIWSGRDDY 337 (390)
Q Consensus 269 ~~~~--~~~~~~~~~~~~~~~~~~~-~-----~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~-~~~l-~v~GG~~~~ 337 (390)
.... ..+..... .+..+-..++ + +..+.-+|..+...--.+..-..-.+-+++++ ++.| |||||.+..
T Consensus 407 RA~nEWE~G~pD~R-Y~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd~~ 484 (670)
T 3ju4_A 407 RAENEWEAGAPDDR-YKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGEDHF 484 (670)
T ss_dssp SSTTCSSTTCCCCC-SSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBCSC
T ss_pred ccccccccCCCccc-ccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcccC
Confidence 3322 11111100 0001111111 1 22355577777654222223334445555555 5554 688997643
No 148
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=89.28 E-value=19 Score=35.88 Aligned_cols=214 Identities=9% Similarity=0.059 Sum_probs=101.5
Q ss_pred ceEEEECCCCcEEeeeecCCCC--CCCceeeEEEe-CCEEEEEcceeCCceeecceEEEEcCcc------eeE---EecC
Q psy1098 53 ELHVFNTATNQWFIPTLKGDIP--PGCAAYGIVVD-NTRVLIFGGMVEYGKYSSDLYELQASKW------EWK---RLKP 120 (390)
Q Consensus 53 ~~~~~d~~~~~W~~~~~~~~~p--~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~------~W~---~~~~ 120 (390)
.+.+||+.+++++......... ....-+++... ++.|++ |... .-+++||+.+. .+. ....
T Consensus 393 GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gT~~------~Gl~~~~~~~~~~~~~~~~~~~~~~~~ 465 (758)
T 3ott_A 393 SINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWI-STCL------GGIFVVDKHKLMQSTSGQYIAEQNYSV 465 (758)
T ss_dssp EEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEE-EESS------SCEEEEEHHHHHHCCSSEEECSEEECG
T ss_pred cHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEE-EECC------CceEEEccccccccCCcceeccccccc
Confidence 4899999999887765321111 11122333333 356766 3221 22677776531 221 1111
Q ss_pred CCCCCCCCCCCCccceEEEE-CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCCCCcee
Q psy1098 121 KPPRFGSPPCPRLGHSFTLI-GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESH 199 (390)
Q Consensus 121 ~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~ 199 (390)
. ..++. ..-.++... ++.|++++|... -+++||..+ .++..+... .++....-.
T Consensus 466 ~----~~l~~-~~i~~i~~d~~g~lWi~~~t~~----------------Gl~~~d~~~---~~~~~~~~~-~~~~~~~~~ 520 (758)
T 3ott_A 466 H----NGLSG-MFINQIIPDNEGNVWVLLYNNK----------------GIDKINPRT---REVTKLFAD-ELTGEKSPN 520 (758)
T ss_dssp G----GTCSC-SCEEEEEECTTSCEEEEETTCS----------------SEEEEETTT---TEEEEECTT-TSCGGGCEE
T ss_pred c----ccccc-ceeeeEEEcCCCCEEEEccCCC----------------CcEEEeCCC---CceEEecCC-CcCCCcccc
Confidence 0 00111 111222222 467888655432 278888865 355543211 111111111
Q ss_pred eeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCcccCCCcccccc
Q psy1098 200 TACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRSL 279 (390)
Q Consensus 200 ~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~ 279 (390)
++... .++.|++-. . ..+.+||+.+.+++... ...+|.. .-.+++.-++.|++...
T Consensus 521 ~i~~d----~~g~lWigt-~-----~Gl~~~~~~~~~~~~~~-~~gl~~~-~i~~i~~~~g~lWi~t~------------ 576 (758)
T 3ott_A 521 YLLCD----EDGLLWVGF-H-----GGVMRINPKDESQQSIS-FGSFSNN-EILSMTCVKNSIWVSTT------------ 576 (758)
T ss_dssp EEEEC----TTSCEEEEE-T-----TEEEEECC--CCCCBCC-CCC---C-CEEEEEEETTEEEEEES------------
T ss_pred eEEEC----CCCCEEEEe-c-----CceEEEecCCCceEEec-ccCCCcc-ceEEEEECCCCEEEECC------------
Confidence 22221 267788643 2 35899999988776643 1223322 22333344678887642
Q ss_pred ccccceecCceEEeecCCCeeeecccccccCCCCCCCCCcceeeeCCEEEEEeccCCc
Q psy1098 280 HEKEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVINSRMYIWSGRDDY 337 (390)
Q Consensus 280 ~~~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~ 337 (390)
..+.+||+.+.+.+... +|...+..++....+.-+.+||.+|.
T Consensus 577 --------~Gl~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~G~l~fG~~~Gl 619 (758)
T 3ott_A 577 --------NGLWIIDRKTMDARQQN-------MTNKRFTSLLFDPKEDCVYLGGADGF 619 (758)
T ss_dssp --------SCEEEEETTTCCEEEC---------CCCCCSEEEEETTTTEEEEECBSEE
T ss_pred --------CCeEEEcCCCceeEEec-------CCCCceeeeEEECCCCcEEEecCCce
Confidence 46889999988876543 33333332222223445567777654
No 149
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=89.15 E-value=5.5 Score=34.79 Aligned_cols=68 Identities=13% Similarity=0.094 Sum_probs=37.3
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCe--EeecccCCCCCCCCceeeEE-----EECCEEEEEcCcccCCCccccccccc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMT--WQKPQILGPQPLPRSLHTAC-----VIGDRMFIFGGWVPILKDESRSLHEK 282 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~-----~~~~~i~i~GG~~~~~~~~~~~~~~~ 282 (390)
+++.++.|+.+ ..+.+||+.+.. ...+... .....+.-.+++ ..++.+++.|+.
T Consensus 128 ~~~~l~~~~~d----~~i~vwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~l~~~~~-------------- 188 (357)
T 3i2n_A 128 GAPEIVTGSRD----GTVKVWDPRQKDDPVANMEPV-QGENKRDCWTVAFGNAYNQEERVVCAGYD-------------- 188 (357)
T ss_dssp CCCEEEEEETT----SCEEEECTTSCSSCSEEECCC-TTSCCCCEEEEEEECCCC-CCCEEEEEET--------------
T ss_pred CccEEEEEeCC----CeEEEEeCCCCCCcceecccc-CCCCCCceEEEEEEeccCCCCCEEEEEcc--------------
Confidence 56677777765 468888887654 2221110 111111222222 136677777764
Q ss_pred cceecCceEEeecCCCee
Q psy1098 283 EWKCSNQLACLHLPEMTW 300 (390)
Q Consensus 283 ~~~~~~~~~~~d~~~~~W 300 (390)
...+.+||+.+.+-
T Consensus 189 ----d~~i~i~d~~~~~~ 202 (357)
T 3i2n_A 189 ----NGDIKLFDLRNMAL 202 (357)
T ss_dssp ----TSEEEEEETTTTEE
T ss_pred ----CCeEEEEECccCce
Confidence 35788899887764
No 150
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=88.72 E-value=14 Score=33.59 Aligned_cols=83 Identities=5% Similarity=-0.019 Sum_probs=44.3
Q ss_pred cceEEEECCCCcEEeeeecCCCCCCCce-eeEEE-eCCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCC
Q psy1098 52 EELHVFNTATNQWFIPTLKGDIPPGCAA-YGIVV-DNTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPP 129 (390)
Q Consensus 52 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p 129 (390)
+.++++|..+++...+.. +...... .+++. -++++++.|+.+ ..|.++|..+.+-.....
T Consensus 125 ~tV~lWd~~tg~~~~~~~---~~~~~~~V~sv~fspdg~~lasgs~D------g~v~iWd~~~~~~~~~~~--------- 186 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQKRLRNMT--------- 186 (420)
T ss_dssp TEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEEC---------
T ss_pred CEEEEEECCCCCEEEEEE---ecCCCCcEEEEEECCCCCEEEEEECC------CeEEEEEcCCCcEEEEEe---------
Confidence 468899998887665441 2221111 22222 245677777653 347788888765433221
Q ss_pred CCCccceEEEECCEEEEEcCccC
Q psy1098 130 CPRLGHSFTLIGNKVYLFGGLAN 152 (390)
Q Consensus 130 ~~r~~~~~~~~~~~l~v~GG~~~ 152 (390)
.......+...++.+++.|+.+.
T Consensus 187 ~h~~~v~~~s~~~~~l~sgs~d~ 209 (420)
T 4gga_A 187 SHSARVGSLSWNSYILSSGSRSG 209 (420)
T ss_dssp CCSSCEEEEEEETTEEEEEETTS
T ss_pred CCCCceEEEeeCCCEEEEEeCCC
Confidence 11122234445667777777654
No 151
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=88.48 E-value=20 Score=35.27 Aligned_cols=105 Identities=9% Similarity=0.018 Sum_probs=55.9
Q ss_pred ecceEEEEcCc------c--eeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeee
Q psy1098 102 SSDLYELQASK------W--EWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTL 173 (390)
Q Consensus 102 ~~~v~~~d~~~------~--~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~ 173 (390)
.+++|.+|..+ . .+..+... ...........++.+|+.+.... ....++.+
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~s~dg~~l~~~s~~~~-------------~~~~l~~~ 316 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDN--------FEGEYDYVTNEGTVFTFKTNRHS-------------PNYRLINI 316 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECS--------SSSCEEEEEEETTEEEEEECTTC-------------TTCEEEEE
T ss_pred ccEEEEEECcccccccCCccceEEeeCC--------CCcEEEEEeccCCEEEEEECCCC-------------CCCEEEEE
Confidence 46799999876 3 57776542 11111223334678888765432 23358888
Q ss_pred ecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCe
Q psy1098 174 ELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMT 236 (390)
Q Consensus 174 d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~ 236 (390)
++.++....|+.+... .+.. .-..+... .++.+++....++ ...++++|+.+++
T Consensus 317 d~~~~~~~~~~~l~~~--~~~~-~~~~~~~~----~~~~lv~~~~~~g--~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 317 DFTDPEESKWKVLVPE--HEKD-VLEWVACV----RSNFLVLCYLHDV--KNTLQLHDLATGA 370 (710)
T ss_dssp ETTSCCGGGCEEEECC--CSSC-EEEEEEEE----TTTEEEEEEEETT--EEEEEEEETTTCC
T ss_pred eCCCCCcccceeccCC--CCCC-eEEEEEEE----cCCEEEEEEEECC--EEEEEEEECCCCC
Confidence 8876533357765321 1111 11112222 1567776664433 2468899985554
No 152
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=88.44 E-value=13 Score=33.01 Aligned_cols=24 Identities=8% Similarity=0.313 Sum_probs=15.4
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcE
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQW 64 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W 64 (390)
++.+++.|+.+ ..+.+||..+...
T Consensus 55 ~~~~l~~~~~d----g~i~iw~~~~~~~ 78 (408)
T 4a11_B 55 EGRYMLSGGSD----GVIVLYDLENSSR 78 (408)
T ss_dssp TCCEEEEEETT----SCEEEEECCCCSS
T ss_pred CCCEEEEEcCC----CeEEEEECCCCcc
Confidence 45677777743 3478888876553
No 153
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=88.06 E-value=21 Score=35.06 Aligned_cols=105 Identities=11% Similarity=-0.012 Sum_probs=58.4
Q ss_pred cceEEEEcCcc--eeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCce
Q psy1098 103 SDLYELQASKW--EWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHT 180 (390)
Q Consensus 103 ~~v~~~d~~~~--~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 180 (390)
+++|.+|..+. .+..+... ...........++.+|+....+. ....++.+++.++..
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~--------~~~~~~~~~~~g~~l~~~t~~~~-------------~~~~l~~~d~~~~~~ 317 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGD--------LDADVSLVDNKGSTLYLLTNRDA-------------PNRRLVTVDAANPGP 317 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECS--------SSSCEEEEEEETTEEEEEECTTC-------------TTCEEEEEETTSCCG
T ss_pred cEEEEEECCCCCCceEEEeCC--------CCceEEEEeccCCEEEEEECCCC-------------CCCEEEEEeCCCCCc
Confidence 68999998665 67776542 11111123345788988865432 223588888887654
Q ss_pred eeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeec
Q psy1098 181 TVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKP 240 (390)
Q Consensus 181 ~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~ 240 (390)
..|+.+.+.. ... - ..... ++.|++..-.++ ...++++|+.......+
T Consensus 318 ~~~~~l~~~~--~~~--~-~~s~~-----g~~lv~~~~~~g--~~~l~~~d~~g~~~~~l 365 (693)
T 3iuj_A 318 AHWRDLIPER--QQV--L-TVHSG-----SGYLFAEYMVDA--TARVEQFDYEGKRVREV 365 (693)
T ss_dssp GGCEEEECCC--SSC--E-EEEEE-----TTEEEEEEEETT--EEEEEEECTTSCEEEEE
T ss_pred cccEEEecCC--CCE--E-EEEEE-----CCEEEEEEEECC--eeEEEEEECCCCeeEEe
Confidence 5687653321 111 1 22222 556655433222 24688899886655543
No 154
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=87.89 E-value=7.1 Score=33.95 Aligned_cols=69 Identities=6% Similarity=0.086 Sum_probs=34.0
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCC-CceeeEEEe---CCEEEEEcceeCCceeecceEEEEcCc
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPG-CAAYGIVVD---NTRVLIFGGMVEYGKYSSDLYELQASK 112 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~-r~~~~~~~~---~~~iyv~GG~~~~~~~~~~v~~~d~~~ 112 (390)
+++.++.|+.+ ..+.+||..++....+.. +... ..-.+++.. ++.+++.|+.+ ..+.++|..+
T Consensus 24 ~g~~lasgs~D----~~v~lwd~~~~~~~~~~~---l~gH~~~V~~v~~~~~~~~~~l~s~s~D------~~v~iWd~~~ 90 (316)
T 3bg1_A 24 YGTRLATCSSD----RSVKIFDVRNGGQILIAD---LRGHEGPVWQVAWAHPMYGNILASCSYD------RKVIIWREEN 90 (316)
T ss_dssp GGCEEEEEETT----TEEEEEEEETTEEEEEEE---EECCSSCEEEEEECCGGGSSCEEEEETT------SCEEEECCSS
T ss_pred CCCEEEEEeCC----CeEEEEEecCCCcEEEEE---EcCCCccEEEEEeCCCCCCCEEEEEECC------CEEEEEECCC
Confidence 45566666633 347777876655332221 1110 111222221 24566667653 3366788877
Q ss_pred ceeEEe
Q psy1098 113 WEWKRL 118 (390)
Q Consensus 113 ~~W~~~ 118 (390)
..|...
T Consensus 91 ~~~~~~ 96 (316)
T 3bg1_A 91 GTWEKS 96 (316)
T ss_dssp SCCCEE
T ss_pred CcceEE
Confidence 665443
No 155
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=87.22 E-value=14 Score=31.91 Aligned_cols=17 Identities=0% Similarity=-0.226 Sum_probs=12.1
Q ss_pred ceEEeecCCCeeeeccc
Q psy1098 289 QLACLHLPEMTWEDLSV 305 (390)
Q Consensus 289 ~~~~~d~~~~~W~~v~~ 305 (390)
.+|.+|+.+.+++.+..
T Consensus 302 ~v~~~d~~~g~~~~~~~ 318 (343)
T 1ri6_A 302 SVYEIVGEQGLLHEKGR 318 (343)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred EEEEEcCCCceeeEccc
Confidence 35555878888888765
No 156
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=87.19 E-value=23 Score=34.79 Aligned_cols=153 Identities=7% Similarity=0.003 Sum_probs=72.4
Q ss_pred ccceEEEECCCCcEE--eeeecCCCCCCCceeeE-EEeCCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCC
Q psy1098 51 VEELHVFNTATNQWF--IPTLKGDIPPGCAAYGI-VVDNTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGS 127 (390)
Q Consensus 51 ~~~~~~~d~~~~~W~--~~~~~~~~p~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~ 127 (390)
...++.++..+..-. .+.. ........... ..-+++.+++...... ..+++|.++..+..+..+...
T Consensus 201 ~~~v~~~~l~t~~~~~~lv~~--~~~~~~~~~~~~~SpDG~~l~~~~~~~~--~~~~l~~~~~~~~~~~~l~~~------ 270 (695)
T 2bkl_A 201 YTTIRYHTLGTEPSKDTVVHE--RTGDPTTFLQSDLSRDGKYLFVYILRGW--SENDVYWKRPGEKDFRLLVKG------ 270 (695)
T ss_dssp GCEEEEEETTSCGGGCEEEEC--CCCCTTCEEEEEECTTSCCEEEEEEETT--TEEEEEEECTTCSSCEEEEEC------
T ss_pred CCEEEEEECCCCchhceEEEe--cCCCCEEEEEEEECCCCCEEEEEEeCCC--CceEEEEEcCCCCceEEeecC------
Confidence 345777777665532 2221 11111222222 2334444444443321 235788887766677777642
Q ss_pred CCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeecc
Q psy1098 128 PPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDE 207 (390)
Q Consensus 128 ~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~ 207 (390)
.. .....+..++.+|+....+ .....++.+|+.++....|..+... .+.. .-......
T Consensus 271 --~~-~~~~~~~~~g~l~~~s~~~-------------~~~~~l~~~d~~~~~~~~~~~l~~~--~~~~-~l~~~~~~--- 328 (695)
T 2bkl_A 271 --VG-AKYEVHAWKDRFYVLTDEG-------------APRQRVFEVDPAKPARASWKEIVPE--DSSA-SLLSVSIV--- 328 (695)
T ss_dssp --SS-CCEEEEEETTEEEEEECTT-------------CTTCEEEEEBTTBCSGGGCEEEECC--CSSC-EEEEEEEE---
T ss_pred --CC-ceEEEEecCCcEEEEECCC-------------CCCCEEEEEeCCCCCccCCeEEecC--CCCC-eEEEEEEE---
Confidence 11 1122222355565554332 1233588888876543347765321 1111 11122233
Q ss_pred CCCcEEEEEcCCCCCccCcEEEEecCCCeEee
Q psy1098 208 YKNTKLIIYGGMSGNRLSDLFMLDINSMTWQK 239 (390)
Q Consensus 208 ~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~ 239 (390)
++.+++....++ ...++++++....-..
T Consensus 329 --~~~lv~~~~~dg--~~~l~~~~~~g~~~~~ 356 (695)
T 2bkl_A 329 --GGHLSLEYLKDA--TSEVRVATLKGKPVRT 356 (695)
T ss_dssp --TTEEEEEEEETT--EEEEEEEETTCCEEEE
T ss_pred --CCEEEEEEEECC--EEEEEEEeCCCCeeEE
Confidence 677777765433 2568888876543333
No 157
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=87.11 E-value=10 Score=32.64 Aligned_cols=60 Identities=15% Similarity=0.070 Sum_probs=31.6
Q ss_pred cceEEEECCCCcEEeeeecCC-CCCCCceeeEEEeCCEEEEEcceeCCc------eeecceEEEEcCc
Q psy1098 52 EELHVFNTATNQWFIPTLKGD-IPPGCAAYGIVVDNTRVLIFGGMVEYG------KYSSDLYELQASK 112 (390)
Q Consensus 52 ~~~~~~d~~~~~W~~~~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~------~~~~~v~~~d~~~ 112 (390)
..++.||+.+++.+.+..... .+..+.....+.-++++|+. ...... .....+|++++..
T Consensus 73 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~-~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 73 TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAG-TMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEE-EEECCSBTTBCCTTCEEEEEECTTS
T ss_pred CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEe-cCCcccccccccCCCcEEEEEECCC
Confidence 468999999988877664211 12222222223335677663 222110 1124688888753
No 158
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=87.06 E-value=24 Score=34.51 Aligned_cols=74 Identities=12% Similarity=0.182 Sum_probs=38.4
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE--CC-EEEEEcCcccCCCcccccccccccee
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI--GD-RMFIFGGWVPILKDESRSLHEKEWKC 286 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~-~i~i~GG~~~~~~~~~~~~~~~~~~~ 286 (390)
++++++.+..++ ...+|.+|........+. ...... ...+.. ++ .|++.+..... .
T Consensus 322 dg~~l~~~~~~g--~~~l~~~~~~~~~~~~l~---~~~~~v--~~~~~~spdg~~l~~~~~~~~~--------------~ 380 (706)
T 2z3z_A 322 NNQFIWQSRRDG--WNHLYLYDTTGRLIRQVT---KGEWEV--TNFAGFDPKGTRLYFESTEASP--------------L 380 (706)
T ss_dssp SSEEEEEECTTS--SCEEEEEETTSCEEEECC---CSSSCE--EEEEEECTTSSEEEEEESSSCT--------------T
T ss_pred CCEEEEEEccCC--ccEEEEEECCCCEEEecC---CCCeEE--EeeeEEcCCCCEEEEEecCCCC--------------c
Confidence 456666654443 356888887776666642 111111 121222 34 45555443110 0
Q ss_pred cCceEEeecCCCeeeecc
Q psy1098 287 SNQLACLHLPEMTWEDLS 304 (390)
Q Consensus 287 ~~~~~~~d~~~~~W~~v~ 304 (390)
...++.+|+.+.+.+.+.
T Consensus 381 ~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 381 ERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp CBEEEEEETTCCCCEESC
T ss_pred eEEEEEEEcCCCCceecc
Confidence 247888888877655554
No 159
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=86.76 E-value=15 Score=31.89 Aligned_cols=62 Identities=6% Similarity=0.115 Sum_probs=35.9
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE----CCEEEEEcCcccCCCccccccccccce
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI----GDRMFIFGGWVPILKDESRSLHEKEWK 285 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~----~~~i~i~GG~~~~~~~~~~~~~~~~~~ 285 (390)
++.+++.|+.+ ..+.+||+.+.+-.... .. ...-.++... ++..++.|+.
T Consensus 179 ~~~~l~~~~~d----~~i~i~d~~~~~~~~~~---~~--~~~v~~~~~~~~~~~~~~l~~~~~----------------- 232 (357)
T 3i2n_A 179 EERVVCAGYDN----GDIKLFDLRNMALRWET---NI--KNGVCSLEFDRKDISMNKLVATSL----------------- 232 (357)
T ss_dssp CCCEEEEEETT----SEEEEEETTTTEEEEEE---EC--SSCEEEEEESCSSSSCCEEEEEES-----------------
T ss_pred CCCEEEEEccC----CeEEEEECccCceeeec---CC--CCceEEEEcCCCCCCCCEEEEECC-----------------
Confidence 67777777765 46889999887643321 11 1112233333 4567777764
Q ss_pred ecCceEEeecCCC
Q psy1098 286 CSNQLACLHLPEM 298 (390)
Q Consensus 286 ~~~~~~~~d~~~~ 298 (390)
-..+.+||+.+.
T Consensus 233 -dg~i~i~d~~~~ 244 (357)
T 3i2n_A 233 -EGKFHVFDMRTQ 244 (357)
T ss_dssp -TTEEEEEEEEEE
T ss_pred -CCeEEEEeCcCC
Confidence 346777887654
No 160
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=86.45 E-value=6.1 Score=36.23 Aligned_cols=66 Identities=14% Similarity=0.058 Sum_probs=38.0
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
++.+++.|+.+ ..|.++|+.+.....+...... .....++... ++++++.|+. ..
T Consensus 176 ~~~~l~s~s~D----~~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~g~~------------------dg 231 (435)
T 4e54_B 176 NTNQFYASSME----GTTRLQDFKGNILRVFASSDTI--NIWFCSLDVSASSRMVVTGDN------------------VG 231 (435)
T ss_dssp CTTEEEEECSS----SCEEEEETTSCEEEEEECCSSC--SCCCCCEEEETTTTEEEEECS------------------SS
T ss_pred CCCEEEEEeCC----CEEEEeeccCCceeEEeccCCC--CccEEEEEECCCCCEEEEEeC------------------CC
Confidence 45677778776 3578889887765543221111 1111222233 6678888875 34
Q ss_pred ceEEeecCCCe
Q psy1098 289 QLACLHLPEMT 299 (390)
Q Consensus 289 ~~~~~d~~~~~ 299 (390)
.+.++|+.+..
T Consensus 232 ~i~~wd~~~~~ 242 (435)
T 4e54_B 232 NVILLNMDGKE 242 (435)
T ss_dssp BEEEEESSSCB
T ss_pred cEeeeccCcce
Confidence 67788876543
No 161
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=86.26 E-value=15 Score=31.32 Aligned_cols=42 Identities=17% Similarity=0.201 Sum_probs=22.3
Q ss_pred CceEEeecCCCeeeecccccccCCCCCCCCCcceeee--CCEEEEEeccCCc
Q psy1098 288 NQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVI--NSRMYIWSGRDDY 337 (390)
Q Consensus 288 ~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~ 337 (390)
..+.+||..+.+ .+.. +..-...-.++.+ ++++++.||.++.
T Consensus 264 ~~i~iwd~~~~~--~~~~------l~gH~~~V~~l~~spdg~~l~S~s~D~~ 307 (318)
T 4ggc_A 264 NQLVIWKYPTMA--KVAE------LKGHTSRVLSLTMSPDGATVASAAADET 307 (318)
T ss_dssp CCEEEEETTTCC--EEEE------ECCCSSCEEEEEECTTSSCEEEEETTTE
T ss_pred CEEEEEECCCCc--EEEE------EcCCCCCEEEEEEcCCCCEEEEEecCCe
Confidence 468889987654 2222 2111111122222 5778888888764
No 162
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=86.14 E-value=25 Score=33.80 Aligned_cols=107 Identities=10% Similarity=0.032 Sum_probs=55.7
Q ss_pred ceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccC-CCCC
Q psy1098 169 DFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQIL-GPQP 247 (390)
Q Consensus 169 ~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~-~~~p 247 (390)
.++.+|..+.. ...+. .++..+.-|.....++ +..+|+.... .+.|.++|..+.+-...... +..|
T Consensus 321 ~v~~vd~~~~~---~~~v~---~i~~~~~~~d~~~~pd---gr~~~va~~~----sn~V~ViD~~t~kl~~~i~vgg~~P 387 (567)
T 1qks_A 321 KILLVDYTDLN---NLKTT---EISAERFLHDGGLDGS---HRYFITAANA----RNKLVVIDTKEGKLVAIEDTGGQTP 387 (567)
T ss_dssp EEEEEETTCSS---EEEEE---EEECCSSEEEEEECTT---SCEEEEEEGG----GTEEEEEETTTTEEEEEEECSSSSB
T ss_pred eEEEEecCCCc---cceee---eeeccccccCceECCC---CCEEEEEeCC----CCeEEEEECCCCcEEEEEeccCcCC
Confidence 46777766532 11111 1233445555555432 3445554322 26799999999875543334 5666
Q ss_pred CCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecCceEEeecCCC-----eeeeccc
Q psy1098 248 LPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEM-----TWEDLSV 305 (390)
Q Consensus 248 ~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-----~W~~v~~ 305 (390)
.+..+.....- .+.+|+.+-.. ...+-++|..+. .|+.+..
T Consensus 388 hpg~g~~~~~p~~g~v~~t~~~g-----------------~~~Vsvid~~~~~~~~~~~kvv~~ 434 (567)
T 1qks_A 388 HPGRGANFVHPTFGPVWATSHMG-----------------DDSVALIGTDPEGHPDNAWKILDS 434 (567)
T ss_dssp CCTTCEEEEETTTEEEEEEEBSS-----------------SSEEEEEECCTTTCTTTBTSEEEE
T ss_pred CCccceeeECCCCCcEEEeCCCC-----------------CCeEEEecCCCCCCccccCEEEEE
Confidence 66444333222 25677654210 246777776652 3877665
No 163
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=85.95 E-value=12 Score=30.19 Aligned_cols=63 Identities=10% Similarity=0.194 Sum_probs=40.5
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEee-----cc-cCCCCCCCCceeeEEEECCEEEEEcCcccCCCcccccccccc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQK-----PQ-ILGPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRSLHEKE 283 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~-----~~-~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~ 283 (390)
++++|+|-| +..|+||..+.+-.. +. .-..+| ..-.++...++.+|+|-|
T Consensus 109 ~g~~yfFkg------~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp--~~idaa~~~~g~~Yffkg---------------- 164 (195)
T 1itv_A 109 RGKMLLFSG------RRLWRFDVKAQMVDPRSASEVDRMFPGVP--LDTHDVFQFREKAYFCQD---------------- 164 (195)
T ss_dssp TTEEEEEET------TEEEEEETTTTEECGGGCEEHHHHSTTSC--SSCSEEEEETTEEEEEET----------------
T ss_pred CCeEEEEeC------CEEEEEeCCcccccCCCccChhhcCCCCC--CCCCEEEEeCCeEEEEeC----------------
Confidence 789999977 578999988765332 00 011122 223355556799999977
Q ss_pred ceecCceEEeecCCCee
Q psy1098 284 WKCSNQLACLHLPEMTW 300 (390)
Q Consensus 284 ~~~~~~~~~~d~~~~~W 300 (390)
+..|+||..+.+-
T Consensus 165 ----~~y~~~~~~~~~v 177 (195)
T 1itv_A 165 ----RFYWRVSSRSELN 177 (195)
T ss_dssp ----TEEEEEECCTTCC
T ss_pred ----CEEEEEECCccEE
Confidence 3678888876653
No 164
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=85.87 E-value=17 Score=31.67 Aligned_cols=28 Identities=7% Similarity=0.126 Sum_probs=19.8
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQ 241 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~ 241 (390)
++.+++.|+.+ ..+.++|..+..|+.+.
T Consensus 164 ~~~~l~s~s~D----~~i~iW~~~~~~~~~~~ 191 (330)
T 2hes_X 164 SEALLASSSYD----DTVRIWKDYDDDWECVA 191 (330)
T ss_dssp SSSEEEEEETT----SCEEEEEEETTEEEEEE
T ss_pred CCCEEEEEcCC----CeEEEEECCCCCeeEEE
Confidence 56778888876 45778888777776543
No 165
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=85.86 E-value=28 Score=34.09 Aligned_cols=62 Identities=13% Similarity=0.144 Sum_probs=35.2
Q ss_pred EEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecCce
Q psy1098 212 KLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSNQL 290 (390)
Q Consensus 212 ~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~ 290 (390)
..++.|+.+ ..|.+||+.+.+-...- .+ ....-.+++.. ++++++.|+. -..+
T Consensus 532 ~~l~s~s~d----~~v~vwd~~~~~~~~~~-~~---h~~~v~~v~~spdg~~l~sg~~------------------Dg~i 585 (694)
T 3dm0_A 532 PTIVSASWD----KTVKVWNLSNCKLRSTL-AG---HTGYVSTVAVSPDGSLCASGGK------------------DGVV 585 (694)
T ss_dssp CEEEEEETT----SCEEEEETTTCCEEEEE-CC---CSSCEEEEEECTTSSEEEEEET------------------TSBC
T ss_pred ceEEEEeCC----CeEEEEECCCCcEEEEE-cC---CCCCEEEEEEeCCCCEEEEEeC------------------CCeE
Confidence 467777765 46888898876543311 01 11111122222 5678888775 3467
Q ss_pred EEeecCCCe
Q psy1098 291 ACLHLPEMT 299 (390)
Q Consensus 291 ~~~d~~~~~ 299 (390)
.++|+.+.+
T Consensus 586 ~iwd~~~~~ 594 (694)
T 3dm0_A 586 LLWDLAEGK 594 (694)
T ss_dssp EEEETTTTE
T ss_pred EEEECCCCc
Confidence 788887765
No 166
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=85.64 E-value=15 Score=30.92 Aligned_cols=191 Identities=8% Similarity=-0.020 Sum_probs=94.4
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEE-eCCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVV-DNTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
++.+|+.... ...+..||+. ......... .....-++++. .++.+|+.... ...+++||+. .+.
T Consensus 25 ~g~l~v~~~~----~~~v~~~d~~-~~~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~ 89 (299)
T 2z2n_A 25 KGKVWITQHK----ANMISCINLD-GKITEYPLP---TPDAKVMCLTISSDGEVWFTENA------ANKIGRITKK-GII 89 (299)
T ss_dssp TSCEEEEETT----TTEEEEECTT-CCEEEEECS---STTCCEEEEEECTTSCEEEEETT------TTEEEEECTT-SCE
T ss_pred CCCEEEEecC----CCcEEEEcCC-CCeEEecCC---cccCceeeEEECCCCCEEEeCCC------CCeEEEECCC-CcE
Confidence 4667775431 2458899998 777665421 11122334443 35677776432 1247888876 344
Q ss_pred EEecCCCCCCCCCCCCCccceEEEE-CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCC
Q psy1098 116 KRLKPKPPRFGSPPCPRLGHSFTLI-GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPS 194 (390)
Q Consensus 116 ~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~ 194 (390)
..+.. + .....-+.++.. ++.+|+...... .++++|. +. +...+.....
T Consensus 90 ~~~~~-~------~~~~~~~~i~~~~~g~l~v~~~~~~----------------~i~~~d~-~g---~~~~~~~~~~--- 139 (299)
T 2z2n_A 90 KEYTL-P------NPDSAPYGITEGPNGDIWFTEMNGN----------------RIGRITD-DG---KIREYELPNK--- 139 (299)
T ss_dssp EEEEC-S------STTCCEEEEEECTTSCEEEEETTTT----------------EEEEECT-TC---CEEEEECSST---
T ss_pred EEEeC-C------CcCCCceeeEECCCCCEEEEecCCc----------------eEEEECC-CC---CEEEecCCCC---
Confidence 44431 1 011122233333 467887543221 3677777 32 2222111111
Q ss_pred CCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCC
Q psy1098 195 PRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILK 273 (390)
Q Consensus 195 ~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~ 273 (390)
...-..++.. .++++|+..... ..++++|+ +.+.......... ..-.+++.. ++++|+....
T Consensus 140 ~~~~~~i~~~----~~g~l~v~~~~~----~~i~~~~~-~g~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~~----- 202 (299)
T 2z2n_A 140 GSYPSFITLG----SDNALWFTENQN----NAIGRITE-SGDITEFKIPTPA---SGPVGITKGNDDALWFVEII----- 202 (299)
T ss_dssp TCCEEEEEEC----TTSCEEEEETTT----TEEEEECT-TCCEEEEECSSTT---CCEEEEEECTTSSEEEEETT-----
T ss_pred CCCCceEEEc----CCCCEEEEeCCC----CEEEEEcC-CCcEEEeeCCCCC---CcceeEEECCCCCEEEEccC-----
Confidence 1112233332 156788865322 46899998 6666553211111 111233332 4678876532
Q ss_pred ccccccccccceecCceEEeecCCCeeeec
Q psy1098 274 DESRSLHEKEWKCSNQLACLHLPEMTWEDL 303 (390)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v 303 (390)
...+.+||+ +.+...+
T Consensus 203 -------------~~~i~~~~~-~g~~~~~ 218 (299)
T 2z2n_A 203 -------------GNKIGRITT-SGEITEF 218 (299)
T ss_dssp -------------TTEEEEECT-TCCEEEE
T ss_pred -------------CceEEEECC-CCcEEEE
Confidence 357888998 6666654
No 167
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=85.63 E-value=28 Score=33.98 Aligned_cols=79 Identities=4% Similarity=-0.052 Sum_probs=39.4
Q ss_pred CcEEEEEcCCCC-CccCcEEEEecCCC-eEeecccCCCCC-CCCceeeEEEE--CCEEEEEcCcccCCCccccccccccc
Q psy1098 210 NTKLIIYGGMSG-NRLSDLFMLDINSM-TWQKPQILGPQP-LPRSLHTACVI--GDRMFIFGGWVPILKDESRSLHEKEW 284 (390)
Q Consensus 210 ~~~i~v~GG~~~-~~~~~v~~~d~~~~-~W~~~~~~~~~p-~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~ 284 (390)
+++.++++..+. .....++++|+.+. ....+....... ..........- ++++++.+..++
T Consensus 268 dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g-------------- 333 (706)
T 2z3z_A 268 DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG-------------- 333 (706)
T ss_dssp TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS--------------
T ss_pred CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCC--------------
Confidence 455444433321 22357899999988 666543211110 00001112222 667665554321
Q ss_pred eecCceEEeecCCCeeeecc
Q psy1098 285 KCSNQLACLHLPEMTWEDLS 304 (390)
Q Consensus 285 ~~~~~~~~~d~~~~~W~~v~ 304 (390)
...+|.+|..+...+.+.
T Consensus 334 --~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 334 --WNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp --SCEEEEEETTSCEEEECC
T ss_pred --ccEEEEEECCCCEEEecC
Confidence 357888887776666654
No 168
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=85.42 E-value=16 Score=31.10 Aligned_cols=195 Identities=8% Similarity=0.010 Sum_probs=92.5
Q ss_pred CCEEEEEcceeCCceeecceEEEEcCcc--eeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCc
Q psy1098 86 NTRVLIFGGMVEYGKYSSDLYELQASKW--EWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPS 163 (390)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~v~~~d~~~~--~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~ 163 (390)
.+++++.|..+ ..+.++|.++. .|+.-... ........+.-++++++.+.
T Consensus 4 ~~~~lv~~~~~------~~v~~~d~~tG~~~w~~~~~~--------~~~~~~~~~~pdG~ilvs~~-------------- 55 (276)
T 3no2_A 4 PQHLLVGGSGW------NKIAIINKDTKEIVWEYPLEK--------GWECNSVAATKAGEILFSYS-------------- 55 (276)
T ss_dssp CCEEEEECTTC------SEEEEEETTTTEEEEEEECCT--------TCCCCEEEECTTSCEEEECB--------------
T ss_pred CCcEEEeeCCC------CEEEEEECCCCeEEEEeCCCc--------cCCCcCeEECCCCCEEEeCC--------------
Confidence 35777776542 45788898665 36543210 01222223333677777321
Q ss_pred cccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCe-Eeeccc
Q psy1098 164 YKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMT-WQKPQI 242 (390)
Q Consensus 164 ~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~-W~~~~~ 242 (390)
+.++.+|. +. ...|+.-. +....-+++...+ ++++++..... ...++.+|+.... |+...
T Consensus 56 ----~~V~~~d~-~G-~~~W~~~~-----~~~~~~~~~~~~~----dG~~lv~~~~~---~~~v~~vd~~Gk~l~~~~~- 116 (276)
T 3no2_A 56 ----KGAKMITR-DG-RELWNIAA-----PAGCEMQTARILP----DGNALVAWCGH---PSTILEVNMKGEVLSKTEF- 116 (276)
T ss_dssp ----SEEEEECT-TS-CEEEEEEC-----CTTCEEEEEEECT----TSCEEEEEEST---TEEEEEECTTSCEEEEEEE-
T ss_pred ----CCEEEECC-CC-CEEEEEcC-----CCCccccccEECC----CCCEEEEecCC---CCEEEEEeCCCCEEEEEec-
Confidence 13788888 33 24587521 1111223333332 66666664321 1457788875442 44311
Q ss_pred CCCCCCC--CceeeEEEECCEEEEEcCcccCCCccccccccccceecCceEEeecCCCe-eeecccccccCCCCCCCCCc
Q psy1098 243 LGPQPLP--RSLHTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMT-WEDLSVEVTDDFLPKPRAGH 319 (390)
Q Consensus 243 ~~~~p~~--r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-W~~v~~~~~~~~~p~~r~~~ 319 (390)
....+.+ .........++.+++.... ...+.+||++.+. |+.-... .| +
T Consensus 117 ~~~~~~~~~~~~~v~~~~~G~~lv~~~~------------------~~~v~~~d~~G~~~w~~~~~~-----~~-----~ 168 (276)
T 3no2_A 117 ETGIERPHAQFRQINKNKKGNYLVPLFA------------------TSEVREIAPNGQLLNSVKLSG-----TP-----F 168 (276)
T ss_dssp CCSCSSGGGSCSCCEECTTSCEEEEETT------------------TTEEEEECTTSCEEEEEECSS-----CC-----C
T ss_pred cCCCCcccccccCceECCCCCEEEEecC------------------CCEEEEECCCCCEEEEEECCC-----Cc-----c
Confidence 1111111 1112233345666665432 3578899987443 6543210 11 2
Q ss_pred ceeee-CCEEEEEeccCCccccccceeeeCeeEEEEec
Q psy1098 320 CASVI-NSRMYIWSGRDDYKKAWNNQVCCKDLWYLEVE 356 (390)
Q Consensus 320 ~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~d~w~~~~~ 356 (390)
++..+ ++.+++.+..++.-..++. ..-+-+|++...
T Consensus 169 ~~~~~~~g~~~v~~~~~~~v~~~d~-~tG~~~w~~~~~ 205 (276)
T 3no2_A 169 SSAFLDNGDCLVACGDAHCFVQLNL-ESNRIVRRVNAN 205 (276)
T ss_dssp EEEECTTSCEEEECBTTSEEEEECT-TTCCEEEEEEGG
T ss_pred ceeEcCCCCEEEEeCCCCeEEEEeC-cCCcEEEEecCC
Confidence 23333 6777777655432111110 012578888643
No 169
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=84.83 E-value=10 Score=33.68 Aligned_cols=64 Identities=8% Similarity=0.003 Sum_probs=34.0
Q ss_pred cceEEEECCCCcEEeeeecCCCCCCCceeeEEEe-CCEEEEEcceeCCceeecceEEEEcCcceeEEec
Q psy1098 52 EELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVD-NTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLK 119 (390)
Q Consensus 52 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~ 119 (390)
..++.+|+.+++-..+... + ....+....- +++.+++............+|.+|........+.
T Consensus 168 ~~l~~~d~~~g~~~~l~~~---~-~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~ 232 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQE---N-QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVK 232 (388)
T ss_dssp EEEEEEETTTCCEEEEEEE---S-SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESC
T ss_pred ceEEEEECCCCceEEeecC---C-ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEee
Confidence 5688899988876665521 1 1222222333 3444333332211122457999998876655554
No 170
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=84.81 E-value=21 Score=31.90 Aligned_cols=108 Identities=8% Similarity=0.012 Sum_probs=54.3
Q ss_pred eCCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCC
Q psy1098 85 DNTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTP 162 (390)
Q Consensus 85 ~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~ 162 (390)
.++++++.|+.+ ..+.+||..+.+-...... .. ..-.++.+ ++.+++.|+.+.
T Consensus 107 ~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~--------h~-~~v~~~~~~~~~~~l~s~s~d~---------- 161 (420)
T 3vl1_A 107 LQMRRFILGTTE------GDIKVLDSNFNLQREIDQA--------HV-SEITKLKFFPSGEALISSSQDM---------- 161 (420)
T ss_dssp SSSCEEEEEETT------SCEEEECTTSCEEEEETTS--------SS-SCEEEEEECTTSSEEEEEETTS----------
T ss_pred cCCCEEEEEECC------CCEEEEeCCCcceeeeccc--------cc-CccEEEEECCCCCEEEEEeCCC----------
Confidence 356677777653 3477888876654333110 11 11222333 456666666543
Q ss_pred ccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEe
Q psy1098 163 SYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQ 238 (390)
Q Consensus 163 ~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~ 238 (390)
.+..+|+.+.. .-..+. .... .-.++...+ +++.++.|+.+ ..+.+||+.+.+-.
T Consensus 162 ------~i~iwd~~~~~--~~~~~~---~h~~--~v~~~~~~~----~~~~l~s~~~d----~~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 162 ------QLKIWSVKDGS--NPRTLI---GHRA--TVTDIAIID----RGRNVLSASLD----GTIRLWECGTGTTI 216 (420)
T ss_dssp ------EEEEEETTTCC--CCEEEE---CCSS--CEEEEEEET----TTTEEEEEETT----SCEEEEETTTTEEE
T ss_pred ------eEEEEeCCCCc--CceEEc---CCCC--cEEEEEEcC----CCCEEEEEcCC----CcEEEeECCCCcee
Confidence 26777776532 111111 0111 112233332 56667777765 35888888876533
No 171
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=84.74 E-value=15 Score=30.05 Aligned_cols=96 Identities=17% Similarity=0.225 Sum_probs=48.1
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeE---eecccCCCCCCCCceeeEEE-E--CCEEEEEcCcccCCCcccccccccc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTW---QKPQILGPQPLPRSLHTACV-I--GDRMFIFGGWVPILKDESRSLHEKE 283 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W---~~~~~~~~~p~~r~~~~~~~-~--~~~i~i~GG~~~~~~~~~~~~~~~~ 283 (390)
++++|+|-| +.+|+|+-.+..- ..+...+ +|.....--+++ . ++++|+|-|
T Consensus 79 ~~~iyfFkG------~~~w~~~~~~~~~gyPk~I~~~G-lP~~~~~IDAA~~~~~~gk~yfFkG---------------- 135 (207)
T 1pex_A 79 HDLIFIFRG------RKFWALNGYDILEGYPKKISELG-LPKEVKKISAAVHFEDTGKTLLFSG---------------- 135 (207)
T ss_dssp TTEEEEEET------TEEEEESTTCCCTTCSEESTTTT-CCTTCCCCCEEEECTTTSEEEEEET----------------
T ss_pred CCcEEEEcc------CEEEEEeCCeeccCCceeccccC-CCCCCccccEEEEeCCCCEEEEEeC----------------
Confidence 689999987 5688886432111 0111111 222111222233 2 479999977
Q ss_pred ceecCceEEeecCCCeeeeccccc---ccCCCCCCCCCcceeeeCCEEEEEecc
Q psy1098 284 WKCSNQLACLHLPEMTWEDLSVEV---TDDFLPKPRAGHCASVINSRMYIWSGR 334 (390)
Q Consensus 284 ~~~~~~~~~~d~~~~~W~~v~~~~---~~~~~p~~r~~~~~~~~~~~l~v~GG~ 334 (390)
+..|+||..+++-..--+.. ....+|. .. .++...++++|+|-|.
T Consensus 136 ----~~ywr~d~~~~~~d~gyPr~i~~~~~Gip~-~i-DaAf~~~g~~YfFkg~ 183 (207)
T 1pex_A 136 ----NQVWRYDDTNHIMDKDYPRLIEEDFPGIGD-KV-DAVYEKNGYIYFFNGP 183 (207)
T ss_dssp ----TEEEEEETTTTEECSSCCCBHHHHSTTSCS-CC-SEEEEETTEEEEEETT
T ss_pred ----CEEEEEeCcCccccCCCCccHHHcCCCCCC-Cc-cEEEEcCCcEEEEECC
Confidence 47789998765422100000 0111332 12 2333458899999775
No 172
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=84.60 E-value=21 Score=31.55 Aligned_cols=95 Identities=7% Similarity=-0.007 Sum_probs=49.2
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE--CCEEEEEcCcccCCCccccccccccceec
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI--GDRMFIFGGWVPILKDESRSLHEKEWKCS 287 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~ 287 (390)
++..++.|+.+ ..+.+||+.+..-.... . .........++.. ++++++.|+. -
T Consensus 251 ~~~~l~s~s~D----~~v~lwd~~~~~~~~~~--~-~~~~~~~~~~~~~s~~g~~l~~g~~------------------d 305 (354)
T 2pbi_B 251 SGDAFASGSDD----ATCRLYDLRADREVAIY--S-KESIIFGASSVDFSLSGRLLFAGYN------------------D 305 (354)
T ss_dssp TSSEEEEEETT----SCEEEEETTTTEEEEEE--C-CTTCCSCEEEEEECTTSSEEEEEET------------------T
T ss_pred CCCEEEEEeCC----CeEEEEECCCCcEEEEE--c-CCCcccceeEEEEeCCCCEEEEEEC------------------C
Confidence 56677888776 46888898876432211 1 1111112222322 5677777764 3
Q ss_pred CceEEeecCCCeeeecccccccCCCCCCCCCcceeee--CCEEEEEeccCCc
Q psy1098 288 NQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVI--NSRMYIWSGRDDY 337 (390)
Q Consensus 288 ~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~ 337 (390)
..+.+||+.+.+ .+.. +..-...-.++.+ ++++++.|+.++.
T Consensus 306 ~~i~vwd~~~~~--~~~~------l~~h~~~v~~l~~spdg~~l~sgs~D~~ 349 (354)
T 2pbi_B 306 YTINVWDVLKGS--RVSI------LFGHENRVSTLRVSPDGTAFCSGSWDHT 349 (354)
T ss_dssp SCEEEEETTTCS--EEEE------ECCCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred CcEEEEECCCCc--eEEE------EECCCCcEEEEEECCCCCEEEEEcCCCC
Confidence 478888876553 1221 1111111122222 5777888887753
No 173
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=84.31 E-value=19 Score=30.99 Aligned_cols=67 Identities=12% Similarity=0.175 Sum_probs=34.1
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCc----EEeeeecCCCCCCCceeeEE-EeCCE-EEEEcceeCCceeecceEEEEc
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQ----WFIPTLKGDIPPGCAAYGIV-VDNTR-VLIFGGMVEYGKYSSDLYELQA 110 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~----W~~~~~~~~~p~~r~~~~~~-~~~~~-iyv~GG~~~~~~~~~~v~~~d~ 110 (390)
++.+++.|+.+ ..+.+||..+.. ...+. . ....-.+++ .-+++ +++.|+.+ ..+..||.
T Consensus 22 ~~~~l~~~~~d----~~v~iw~~~~~~~~~~~~~~~---~--~~~~v~~~~~~~~~~~~l~~~~~d------g~i~~wd~ 86 (342)
T 1yfq_A 22 SKSLLLITSWD----GSLTVYKFDIQAKNVDLLQSL---R--YKHPLLCCNFIDNTDLQIYVGTVQ------GEILKVDL 86 (342)
T ss_dssp GGTEEEEEETT----SEEEEEEEETTTTEEEEEEEE---E--CSSCEEEEEEEESSSEEEEEEETT------SCEEEECS
T ss_pred CCCEEEEEcCC----CeEEEEEeCCCCccccceeee---e--cCCceEEEEECCCCCcEEEEEcCC------CeEEEEEe
Confidence 44555666533 347777776655 22222 1 111112222 23455 66666643 34788888
Q ss_pred -CcceeEEe
Q psy1098 111 -SKWEWKRL 118 (390)
Q Consensus 111 -~~~~W~~~ 118 (390)
.+.....+
T Consensus 87 ~~~~~~~~~ 95 (342)
T 1yfq_A 87 IGSPSFQAL 95 (342)
T ss_dssp SSSSSEEEC
T ss_pred ccCCceEec
Confidence 77655444
No 174
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=84.29 E-value=23 Score=31.87 Aligned_cols=97 Identities=10% Similarity=0.084 Sum_probs=50.0
Q ss_pred eeEEecCCCCCCCCCCCceeeeEEe---CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCC--C-------ce
Q psy1098 12 YRWRRIDDPAGPQPRPRHGHRAVAI---KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPG--C-------AA 79 (390)
Q Consensus 12 ~~W~~~~~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~--r-------~~ 79 (390)
.+|+.+. ..+.....++++.. .+.||+.+.... .-..++..+-...+|+.+.....++.. + .-
T Consensus 43 ~~W~~~~----~~~~~~~v~~i~~dp~~~~~l~~g~~~g~-~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i 117 (394)
T 3b7f_A 43 RTWELRG----PVFLGHTIHHIVQDPREPERMLMAARTGH-LGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHV 117 (394)
T ss_dssp CSEEEEE----EESTTSEEEEEEECSSSTTCEEEEEEC---CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEE
T ss_pred CCceECC----ccCCCCceEEEEECCCCCCeEEEEecCCC-CCccEEEeCCCCCCceECCccccCCCcccccccccccce
Confidence 4788763 11222334444444 456777654211 112477766677889987632112211 1 11
Q ss_pred eeEEEe----CCEEEEEcceeCCceeecceEEEEcCcceeEEecC
Q psy1098 80 YGIVVD----NTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKP 120 (390)
Q Consensus 80 ~~~~~~----~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~ 120 (390)
.+++.. .+.||+.+ . ...+++.+-...+|+.+..
T Consensus 118 ~~l~~~~~~~~~~l~~g~-~------~ggl~~S~DgG~tW~~~~~ 155 (394)
T 3b7f_A 118 FWLTPGHASEPGTWYAGT-S------PQGLFRSTDHGASWEPVAG 155 (394)
T ss_dssp EEEEECCTTSTTCEEEEE-E------TTEEEEESSTTSBCEECHH
T ss_pred eEEEeCCCCCCCEEEEEe-c------CCcEEEEcCCCCCeEECcC
Confidence 223333 45676643 2 1347788777788998753
No 175
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=84.14 E-value=7.7 Score=35.49 Aligned_cols=21 Identities=10% Similarity=0.281 Sum_probs=15.0
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINS 234 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~ 234 (390)
...+++.|+.+ ..|.+||+.+
T Consensus 289 ~~~~l~tg~~d----g~v~vwd~~~ 309 (430)
T 2xyi_A 289 SEFILATGSAD----KTVALWDLRN 309 (430)
T ss_dssp CTTEEEEEETT----SEEEEEETTC
T ss_pred CCCEEEEEeCC----CeEEEEeCCC
Confidence 33478888776 4588888875
No 176
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=84.01 E-value=20 Score=30.86 Aligned_cols=64 Identities=19% Similarity=0.301 Sum_probs=32.5
Q ss_pred eCCEEEEEccCCCCcccceEEEECC-CCcEEeeeecCCCCCCCceeeEEEe-CCEEEEEcceeCCceeecceEEEEcCcc
Q psy1098 36 IKDLMLVFGGGNEGIVEELHVFNTA-TNQWFIPTLKGDIPPGCAAYGIVVD-NTRVLIFGGMVEYGKYSSDLYELQASKW 113 (390)
Q Consensus 36 ~~~~iyv~GG~~~~~~~~~~~~d~~-~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~ 113 (390)
.++.+|+... ...++.||+. ...|.... +.. ...+.+.. ++.||+.. . ...++.||+...
T Consensus 106 ~~~~l~v~t~-----~~~l~~~d~~g~~~~~~~~-----~~~-~~~~~~~~~~g~l~vgt-~------~~~l~~~d~~g~ 167 (330)
T 3hxj_A 106 FEDILYVTSM-----DGHLYAINTDGTEKWRFKT-----KKA-IYATPIVSEDGTIYVGS-N------DNYLYAINPDGT 167 (330)
T ss_dssp ETTEEEEECT-----TSEEEEECTTSCEEEEEEC-----SSC-CCSCCEECTTSCEEEEC-T------TSEEEEECTTSC
T ss_pred ECCEEEEEec-----CCEEEEEcCCCCEEEEEcC-----CCc-eeeeeEEcCCCEEEEEc-C------CCEEEEECCCCC
Confidence 3677776432 2358888887 33354422 111 11222333 56666632 1 134888888732
Q ss_pred -eeEE
Q psy1098 114 -EWKR 117 (390)
Q Consensus 114 -~W~~ 117 (390)
.|..
T Consensus 168 ~~~~~ 172 (330)
T 3hxj_A 168 EKWRF 172 (330)
T ss_dssp EEEEE
T ss_pred EeEEE
Confidence 3544
No 177
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=83.86 E-value=16 Score=29.59 Aligned_cols=96 Identities=15% Similarity=0.160 Sum_probs=49.8
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeE-eecccCCCCCCC--CceeeEEEECCEEEEEcCcccCCCcccccccccccee
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTW-QKPQILGPQPLP--RSLHTACVIGDRMFIFGGWVPILKDESRSLHEKEWKC 286 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W-~~~~~~~~~p~~--r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~ 286 (390)
++++|+|-| +..|+|+..+..- ..+... .+|.. ....+....++++|+|-|
T Consensus 64 ~~~~yfFkG------~~yw~~~~~~~~~Pk~i~~~-G~p~~~~~iDAA~~~~~g~~yfFkg------------------- 117 (195)
T 1itv_A 64 SKKLFFFSG------RQVWVYTGASVLGPRRLDKL-GLGADVAQVTGALRSGRGKMLLFSG------------------- 117 (195)
T ss_dssp TCCEEEEET------TEEEEEETTEEEEEEEGGGG-TCCTTCCCCCEEEECSTTEEEEEET-------------------
T ss_pred CCeEEEEeC------CEEEEEcCCccCCCEEeeec-ccCCCccceeEEEEcCCCeEEEEeC-------------------
Confidence 678999988 5688887543211 011111 12221 222333323689999976
Q ss_pred cCceEEeecCCCeeeecccc---cccCCCCCCCCCcceeeeCCEEEEEecc
Q psy1098 287 SNQLACLHLPEMTWEDLSVE---VTDDFLPKPRAGHCASVINSRMYIWSGR 334 (390)
Q Consensus 287 ~~~~~~~d~~~~~W~~v~~~---~~~~~~p~~r~~~~~~~~~~~l~v~GG~ 334 (390)
+..|+||..+.+-..--+. ....++|. .-.++...++.+|++-|.
T Consensus 118 -~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp~--~idaa~~~~g~~Yffkg~ 165 (195)
T 1itv_A 118 -RRLWRFDVKAQMVDPRSASEVDRMFPGVPL--DTHDVFQFREKAYFCQDR 165 (195)
T ss_dssp -TEEEEEETTTTEECGGGCEEHHHHSTTSCS--SCSEEEEETTEEEEEETT
T ss_pred -CEEEEEeCCcccccCCCccChhhcCCCCCC--CCCEEEEeCCeEEEEeCC
Confidence 3678899876542210000 00111322 123444457899999875
No 178
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=83.50 E-value=16 Score=32.44 Aligned_cols=63 Identities=8% Similarity=-0.012 Sum_probs=32.7
Q ss_pred cceEEEECCCCcEEeeeecCCCCCCCceeeEEEe-CCE-EEEEcceeCCceeecceEEEEcCcceeEEec
Q psy1098 52 EELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVD-NTR-VLIFGGMVEYGKYSSDLYELQASKWEWKRLK 119 (390)
Q Consensus 52 ~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~ 119 (390)
..++.+|+.+++...+... + ....+....- +++ |++... .........+|.+|.....+..+.
T Consensus 168 ~~l~~~d~~~g~~~~~~~~---~-~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~ 232 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQD---T-AWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIK 232 (396)
T ss_dssp EEEEEEETTTCCEEEEEEE---S-SCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESS
T ss_pred ceEEEEECCCCcEEeeccC---C-cccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEee
Confidence 4688889888877665521 1 1112222222 233 444332 111112257999998877666554
No 179
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=82.96 E-value=24 Score=31.13 Aligned_cols=145 Identities=7% Similarity=0.001 Sum_probs=71.7
Q ss_pred EEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEE---CCEEEEEcCccCCCCCCCCCCCcc
Q psy1098 88 RVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLI---GNKVYLFGGLANSGGDETKPTPSY 164 (390)
Q Consensus 88 ~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~~~~~~~~ 164 (390)
++++.|+.+ ..+.+||..+.+........ .....-.++.+ ++.+++.|+.+.
T Consensus 87 ~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~l~s~~~d~------------ 141 (383)
T 3ei3_B 87 TTVAVGSKG------GDIILWDYDVQNKTSFIQGM-------GPGDAITGMKFNQFNTNQLFVSSIRG------------ 141 (383)
T ss_dssp TEEEEEEBT------SCEEEEETTSTTCEEEECCC-------STTCBEEEEEEETTEEEEEEEEETTT------------
T ss_pred CEEEEEcCC------CeEEEEeCCCcccceeeecC-------CcCCceeEEEeCCCCCCEEEEEeCCC------------
Confidence 577777653 34778888877655443210 11111222223 346777766543
Q ss_pred ccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCC
Q psy1098 165 KYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILG 244 (390)
Q Consensus 165 ~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~ 244 (390)
.+..+|+.+ .....+....... ..-.++...+ ++++++.|+.+ ..+.+||+....-..+..
T Consensus 142 ----~i~iwd~~~---~~~~~~~~~~~~~--~~v~~~~~~~----~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~-- 202 (383)
T 3ei3_B 142 ----ATTLRDFSG---SVIQVFAKTDSWD--YWYCCVDVSV----SRQMLATGDST----GRLLLLGLDGHEIFKEKL-- 202 (383)
T ss_dssp ----EEEEEETTS---CEEEEEECCCCSS--CCEEEEEEET----TTTEEEEEETT----SEEEEEETTSCEEEEEEC--
T ss_pred ----EEEEEECCC---CceEEEeccCCCC--CCeEEEEECC----CCCEEEEECCC----CCEEEEECCCCEEEEecc--
Confidence 266777765 2333222111111 1112233332 56677787765 468888886444333211
Q ss_pred CCCCCCceeeEEEE-CCE-EEEEcCcccCCCccccccccccceecCceEEeecCC
Q psy1098 245 PQPLPRSLHTACVI-GDR-MFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPE 297 (390)
Q Consensus 245 ~~p~~r~~~~~~~~-~~~-i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 297 (390)
....-.+++.. ++. +++.|+. -..+.+||+.+
T Consensus 203 ---h~~~v~~~~~~~~~~~~l~s~~~------------------d~~i~iwd~~~ 236 (383)
T 3ei3_B 203 ---HKAKVTHAEFNPRCDWLMATSSV------------------DATVKLWDLRN 236 (383)
T ss_dssp ---SSSCEEEEEECSSCTTEEEEEET------------------TSEEEEEEGGG
T ss_pred ---CCCcEEEEEECCCCCCEEEEEeC------------------CCEEEEEeCCC
Confidence 11111222222 344 7777764 34678888876
No 180
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=82.90 E-value=32 Score=32.41 Aligned_cols=22 Identities=9% Similarity=0.074 Sum_probs=14.7
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSM 235 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~ 235 (390)
++++++.++.+ ..+.+||....
T Consensus 478 d~~~las~~~d----~~i~iw~~~~~ 499 (577)
T 2ymu_A 478 DGQTIASASDD----KTVKLWNRNGQ 499 (577)
T ss_dssp TSCEEEEEETT----SEEEEEETTSC
T ss_pred CCCEEEEEeCC----CEEEEEcCCCC
Confidence 67778887765 35777886543
No 181
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=82.62 E-value=21 Score=30.24 Aligned_cols=56 Identities=4% Similarity=0.052 Sum_probs=31.3
Q ss_pred cceEEEECCCCcEEeeeecCCCCCCC-ceeeEE-EeCCEEEEEcceeCCceeecceEEEEcCcceeE
Q psy1098 52 EELHVFNTATNQWFIPTLKGDIPPGC-AAYGIV-VDNTRVLIFGGMVEYGKYSSDLYELQASKWEWK 116 (390)
Q Consensus 52 ~~~~~~d~~~~~W~~~~~~~~~p~~r-~~~~~~-~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~ 116 (390)
+.+.++|..+++...... ..... .-.+++ .-+++.++.|+.+ ..+..+|..+.+-.
T Consensus 45 ~tV~iWd~~tg~~~~~~~---~~~~~~~V~~v~~~~~~~~l~sgs~D------g~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQKRL 102 (318)
T ss_dssp TEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEE
T ss_pred CEEEEEECCCCCEEEEEE---ecCCCCeEEEEEECCCCCEEEEEECC------CcEEEeecCCceeE
Confidence 458899998887655431 11111 112222 2345677777753 23677888877543
No 182
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=82.34 E-value=39 Score=33.01 Aligned_cols=24 Identities=17% Similarity=0.246 Sum_probs=17.9
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeE
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTW 237 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W 237 (390)
++++++.|+.+ ..|.++|+.+.+-
T Consensus 572 dg~~l~sg~~D----g~i~iwd~~~~~~ 595 (694)
T 3dm0_A 572 DGSLCASGGKD----GVVLLWDLAEGKK 595 (694)
T ss_dssp TSSEEEEEETT----SBCEEEETTTTEE
T ss_pred CCCEEEEEeCC----CeEEEEECCCCce
Confidence 67788888876 4578889887653
No 183
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=81.89 E-value=18 Score=32.42 Aligned_cols=65 Identities=9% Similarity=0.146 Sum_probs=38.4
Q ss_pred EEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecCce
Q psy1098 212 KLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSNQL 290 (390)
Q Consensus 212 ~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~ 290 (390)
.+++.|+.+ ..+.+||+.+.+..... ........-.+++.. ++.+++.|+. -..+
T Consensus 145 ~~l~s~~~d----g~i~iwd~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~------------------d~~i 200 (402)
T 2aq5_A 145 NVLLSAGCD----NVILVWDVGTGAAVLTL--GPDVHPDTIYSVDWSRDGALICTSCR------------------DKRV 200 (402)
T ss_dssp TEEEEEETT----SCEEEEETTTTEEEEEE--CTTTCCSCEEEEEECTTSSCEEEEET------------------TSEE
T ss_pred CEEEEEcCC----CEEEEEECCCCCccEEE--ecCCCCCceEEEEECCCCCEEEEEec------------------CCcE
Confidence 577788765 46889999887654421 001111122223332 5667777764 3578
Q ss_pred EEeecCCCee
Q psy1098 291 ACLHLPEMTW 300 (390)
Q Consensus 291 ~~~d~~~~~W 300 (390)
.+||+.+.+-
T Consensus 201 ~iwd~~~~~~ 210 (402)
T 2aq5_A 201 RVIEPRKGTV 210 (402)
T ss_dssp EEEETTTTEE
T ss_pred EEEeCCCCce
Confidence 8999887664
No 184
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=81.68 E-value=34 Score=31.86 Aligned_cols=91 Identities=15% Similarity=0.170 Sum_probs=47.5
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCc--E-Eeeeec-CCCCCCCceeeEEE-----eCCEEEEEcceeCCceeecceEE
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQ--W-FIPTLK-GDIPPGCAAYGIVV-----DNTRVLIFGGMVEYGKYSSDLYE 107 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~--W-~~~~~~-~~~p~~r~~~~~~~-----~~~~iyv~GG~~~~~~~~~~v~~ 107 (390)
++++|+|-| +.+|+|+-..-. . +.+... ..+|. .-..++.. .++++|+|-|. ..|+
T Consensus 107 ~g~~yfFkG------~~yW~~~~~~~~~GYPk~I~~~fpGlp~-~IDAA~~~~~~~~~~~~~yfFkG~--------~yw~ 171 (460)
T 1qhu_A 107 HTSVYLIKG------DKVWVYTSEKNEKVYPKSLQDEFPGIPF-PLDAAVECHRGECQDEGILFFQGN--------RKWF 171 (460)
T ss_dssp TTEEEEEET------TEEEEECC-------CEEHHHHSTTCCS-SCCEEEEECBBTBSSSEEEEEETT--------EEEE
T ss_pred CCcEEEEec------cEEEEEeCCcccCCCCeEhhhccCCCCC-CeeEEEECCccCCCCCeEEEEecc--------cEEE
Confidence 589999988 567777532111 0 111100 01222 22223321 26788888774 3799
Q ss_pred EEcCcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCc
Q psy1098 108 LQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGL 150 (390)
Q Consensus 108 ~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~ 150 (390)
||..+++.... .-+ .. +.. -++....+++|+|-|.
T Consensus 172 yd~~~~~~~~~-~w~----gi--~~i-DAA~~~~g~~YfFkG~ 206 (460)
T 1qhu_A 172 WDLTTGTKKER-SWP----AV--GNC-TSALRWLGRYYCFQGN 206 (460)
T ss_dssp EETTTTEEEEE-CCT----TS--CCC-SEEEEETTEEEEEETT
T ss_pred Eecccceeecc-cCC----CC--Ccc-chheeeCCceEEEECC
Confidence 99988765431 111 11 222 3445557899999775
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=81.59 E-value=25 Score=30.33 Aligned_cols=80 Identities=6% Similarity=-0.078 Sum_probs=40.9
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEE-eCCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVV-DNTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
++++|+...........+++||+.+.....+.. .......-..++. -++++|+.............++++|+.+.+.
T Consensus 97 dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~ 174 (333)
T 2dg1_A 97 DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIE--DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV 174 (333)
T ss_dssp TSCEEEEECTTSSSCCEEEEECTTSCSCEEEEC--SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE
T ss_pred CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEc--cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEE
Confidence 556777654321223568999998877653321 1111112223333 2567777543211111234688999877655
Q ss_pred EEe
Q psy1098 116 KRL 118 (390)
Q Consensus 116 ~~~ 118 (390)
..+
T Consensus 175 ~~~ 177 (333)
T 2dg1_A 175 TPI 177 (333)
T ss_dssp EEE
T ss_pred EEe
Confidence 544
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=81.57 E-value=27 Score=30.76 Aligned_cols=72 Identities=8% Similarity=0.035 Sum_probs=35.1
Q ss_pred cEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecCceEEeecCCCeeeecc
Q psy1098 226 DLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMTWEDLS 304 (390)
Q Consensus 226 ~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v~ 304 (390)
.++++|+.+.+.+.+.. .+ ... ....- +++++++.+.. .+..... .......-...++++|+.+.+.+.+.
T Consensus 265 ~l~~~d~~~g~~~~l~~---~~--~~~-~~~s~~dg~~l~~~~~~-~p~~~~~-~~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 265 VIYKANPETLENEEVMV---MP--PCS-HLMSNFDGSLMVGDGCD-APVDVAD-ADSYNIENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp EEEEECTTTCCEEEEEE---CC--SEE-EEEECSSSSEEEEEECC-C-----------CCCCCCEEEEEETTTTBCCEEE
T ss_pred eEEEEECCCCCeEEeee---CC--CCC-CCccCCCCceEEEecCC-cceeecc-ccccccCCCCcEEEEecccCceEEcc
Confidence 49999998887666432 11 111 22223 66766664421 0000000 00000000357999999888766654
Q ss_pred c
Q psy1098 305 V 305 (390)
Q Consensus 305 ~ 305 (390)
.
T Consensus 337 ~ 337 (396)
T 3c5m_A 337 K 337 (396)
T ss_dssp E
T ss_pred C
Confidence 4
No 187
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=81.57 E-value=23 Score=29.81 Aligned_cols=190 Identities=5% Similarity=-0.015 Sum_probs=93.9
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEe-CCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVD-NTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
++.+|+.... ...+..||+. .+...+... .....-++++.. ++.+|+.... ...+++||+. .++
T Consensus 30 ~g~l~v~~~~----~~~v~~~~~~-~~~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~------~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 30 DGKVWFTQHK----ANKISSLDQS-GRIKEFEVP---TPDAKVMCLIVSSLGDIWFTENG------ANKIGKLSKK-GGF 94 (300)
T ss_dssp TSCEEEEETT----TTEEEEECTT-SCEEEEECS---STTCCEEEEEECTTSCEEEEETT------TTEEEEECTT-SCE
T ss_pred CCCEEEEcCC----CCeEEEECCC-CceEEEECC---CCCCcceeEEECCCCCEEEEecC------CCeEEEECCC-CCe
Confidence 4668886532 2458889988 676655421 111222344433 4578876432 1348889988 555
Q ss_pred EEecCCCCCCCCCCCCCccceEEEE-CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCC
Q psy1098 116 KRLKPKPPRFGSPPCPRLGHSFTLI-GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPS 194 (390)
Q Consensus 116 ~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~ 194 (390)
..+.... ....-+.++.. ++.+|+...... .+++++... ....+.. ...
T Consensus 95 ~~~~~~~-------~~~~~~~i~~~~~g~l~v~~~~~~----------------~i~~~~~~g-~~~~~~~---~~~--- 144 (300)
T 2qc5_A 95 TEYPLPQ-------PDSGPYGITEGLNGDIWFTQLNGD----------------RIGKLTADG-TIYEYDL---PNK--- 144 (300)
T ss_dssp EEEECSS-------TTCCEEEEEECSTTCEEEEETTTT----------------EEEEECTTS-CEEEEEC---SST---
T ss_pred EEecCCC-------CCCCCccceECCCCCEEEEccCCC----------------eEEEECCCC-CEEEccC---CCC---
Confidence 5443210 11222233333 567887543211 367777652 1111221 101
Q ss_pred CCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE--CCEEEEEcCcccCC
Q psy1098 195 PRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI--GDRMFIFGGWVPIL 272 (390)
Q Consensus 195 ~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~ 272 (390)
...-..++..+ ++++|+..... ..+++||+ +.+...... +........+.. ++.+|+....
T Consensus 145 ~~~~~~i~~d~----~g~l~v~~~~~----~~i~~~~~-~g~~~~~~~----~~~~~~~~~i~~d~~g~l~v~~~~---- 207 (300)
T 2qc5_A 145 GSYPAFITLGS----DNALWFTENQN----NSIGRITN-TGKLEEYPL----PTNAAAPVGITSGNDGALWFVEIM---- 207 (300)
T ss_dssp TCCEEEEEECT----TSSEEEEETTT----TEEEEECT-TCCEEEEEC----SSTTCCEEEEEECTTSSEEEEETT----
T ss_pred CCCceeEEECC----CCCEEEEecCC----CeEEEECC-CCcEEEeeC----CCCCCCcceEEECCCCCEEEEccC----
Confidence 11112333321 56688765322 46889998 555554321 111112222333 5678876432
Q ss_pred CccccccccccceecCceEEeecCCCeeeec
Q psy1098 273 KDESRSLHEKEWKCSNQLACLHLPEMTWEDL 303 (390)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~v 303 (390)
...+.+||+ +.++...
T Consensus 208 --------------~~~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 208 --------------GNKIGRITT-TGEISEY 223 (300)
T ss_dssp --------------TTEEEEECT-TCCEEEE
T ss_pred --------------CCEEEEEcC-CCcEEEE
Confidence 346888988 5555554
No 188
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=81.50 E-value=23 Score=29.81 Aligned_cols=178 Identities=6% Similarity=0.020 Sum_probs=84.1
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEE-eCCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVV-DNTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
++.+|+.+.. ....+..||+....-..+. .+....-..++. .++++|+.... ...+++||+.....
T Consensus 88 ~g~l~v~~~~---~~~~i~~~d~~g~~~~~~~----~~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~ 154 (286)
T 1q7f_A 88 SGDIIVTERS---PTHQIQIYNQYGQFVRKFG----ATILQHPRGVTVDNKGRIIVVECK------VMRVIIFDQNGNVL 154 (286)
T ss_dssp TTEEEEEECG---GGCEEEEECTTSCEEEEEC----TTTCSCEEEEEECTTSCEEEEETT------TTEEEEECTTSCEE
T ss_pred CCeEEEEcCC---CCCEEEEECCCCcEEEEec----CccCCCceEEEEeCCCCEEEEECC------CCEEEEEcCCCCEE
Confidence 5778887642 1245888886444333332 111112233433 34578886532 13588888766544
Q ss_pred EEecCCCCCCCCCCCCCccceEEEE-CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCC
Q psy1098 116 KRLKPKPPRFGSPPCPRLGHSFTLI-GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPS 194 (390)
Q Consensus 116 ~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~ 194 (390)
..+.... ....-..++.. ++.+|+..... +.+.+|+... .....+...+.+..
T Consensus 155 ~~~~~~~-------~~~~p~~i~~~~~g~l~v~~~~~----------------~~i~~~~~~g---~~~~~~~~~g~~~~ 208 (286)
T 1q7f_A 155 HKFGCSK-------HLEFPNGVVVNDKQEIFISDNRA----------------HCVKVFNYEG---QYLRQIGGEGITNY 208 (286)
T ss_dssp EEEECTT-------TCSSEEEEEECSSSEEEEEEGGG----------------TEEEEEETTC---CEEEEESCTTTSCS
T ss_pred EEeCCCC-------ccCCcEEEEECCCCCEEEEECCC----------------CEEEEEcCCC---CEEEEEccCCccCC
Confidence 4443210 11111222222 47888864432 2377888654 22222221111111
Q ss_pred CCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEc
Q psy1098 195 PRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFG 266 (390)
Q Consensus 195 ~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~G 266 (390)
-..++..+ ++++|+.....+ ..|.+||+....-..+... .... .-.+++.. ++++|+..
T Consensus 209 ---p~~i~~d~----~G~l~v~~~~~~---~~i~~~~~~g~~~~~~~~~--~~~~-~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 209 ---PIGVGINS----NGEILIADNHNN---FNLTIFTQDGQLISALESK--VKHA-QCFDVALMDDGSVVLAS 268 (286)
T ss_dssp ---EEEEEECT----TCCEEEEECSSS---CEEEEECTTSCEEEEEEES--SCCS-CEEEEEEETTTEEEEEE
T ss_pred ---CcEEEECC----CCCEEEEeCCCC---EEEEEECCCCCEEEEEccc--CCCC-cceeEEECCCCcEEEEC
Confidence 12233321 678888864431 2688999765544333221 1111 11233333 67888874
No 189
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=81.44 E-value=42 Score=32.85 Aligned_cols=123 Identities=12% Similarity=0.146 Sum_probs=68.4
Q ss_pred eeeEEeCCEEEEEccCCCCcccceEEEECCCCc--EEeeeecCCCCCC--------CceeeEEEeCCEEEEEcceeCCce
Q psy1098 31 HRAVAIKDLMLVFGGGNEGIVEELHVFNTATNQ--WFIPTLKGDIPPG--------CAAYGIVVDNTRVLIFGGMVEYGK 100 (390)
Q Consensus 31 ~~~~~~~~~iyv~GG~~~~~~~~~~~~d~~~~~--W~~~~~~~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~ 100 (390)
.+-++.++.||+... ...++.+|..+++ |+.-.. .+.. ....+.++.+++||+....
T Consensus 60 ~~P~v~~g~vyv~~~-----~~~v~AlD~~tG~~~W~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d----- 126 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMS-----WSRVIAVDAASGKELWRYDPE---VAKVKARTSCCDAVNRGVALWGDKVYVGTLD----- 126 (668)
T ss_dssp CCCEEETTEEEEEEG-----GGEEEEEETTTCCEEEEECCC---CCGGGGGGCTTCSCCCCCEEEBTEEEEECTT-----
T ss_pred cCCEEECCEEEEECC-----CCeEEEEECCCChhceEECCC---CCccccccccccCCccceEEECCEEEEEcCC-----
Confidence 344567899998765 3468899987666 765321 1110 0112345567888875421
Q ss_pred eecceEEEEcCcc--eeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCC
Q psy1098 101 YSSDLYELQASKW--EWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSG 178 (390)
Q Consensus 101 ~~~~v~~~d~~~~--~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 178 (390)
..++.+|..+. .|+.-.... ........+-+..++.+|+-.+.... .....++.+|..+.
T Consensus 127 --g~l~alD~~tG~~~W~~~~~~~-----~~~~~~~~~P~v~~~~v~vg~~~~~~-----------~~~g~v~a~D~~tG 188 (668)
T 1kv9_A 127 --GRLIALDAKTGKAIWSQQTTDP-----AKPYSITGAPRVVKGKVIIGNGGAEY-----------GVRGFVSAYDADTG 188 (668)
T ss_dssp --SEEEEEETTTCCEEEEEECSCT-----TSSCBCCSCCEEETTEEEECCBCTTT-----------CCBCEEEEEETTTC
T ss_pred --CEEEEEECCCCCEeeeeccCCC-----CCcceecCCCEEECCEEEEeCCCCCc-----------CCCCEEEEEECCCC
Confidence 35889998765 587643211 00111222334567888763221111 22345888998875
Q ss_pred ceeeeec
Q psy1098 179 HTTVWDM 185 (390)
Q Consensus 179 ~~~~W~~ 185 (390)
. ..|+.
T Consensus 189 ~-~~W~~ 194 (668)
T 1kv9_A 189 K-LAWRF 194 (668)
T ss_dssp C-EEEEE
T ss_pred c-EEEEe
Confidence 4 46875
No 190
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=81.01 E-value=25 Score=30.02 Aligned_cols=75 Identities=13% Similarity=0.126 Sum_probs=36.7
Q ss_pred CEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCC--CCceeeEEE--eCCEEEEEccee--CCce---eecceEEE
Q psy1098 38 DLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPP--GCAAYGIVV--DNTRVLIFGGMV--EYGK---YSSDLYEL 108 (390)
Q Consensus 38 ~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~--~r~~~~~~~--~~~~iyv~GG~~--~~~~---~~~~v~~~ 108 (390)
+.+|+.+.. ...++++|+.+.+-......+. +. ...-+.++. .++.+|+..... .... ....++++
T Consensus 46 ~~l~v~~~~----~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~ 120 (337)
T 1pby_B 46 RIAYATVNK----SESLVKIDLVTGETLGRIDLST-PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120 (337)
T ss_dssp SEEEEEETT----TTEEEEEETTTCCEEEEEECCB-TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEE
T ss_pred CEEEEEeCC----CCeEEEEECCCCCeEeeEEcCC-cccccccccceEECCCCCEEEEEecccccccccccccCceEEEE
Confidence 357776652 2468999998776543221111 00 001112222 244677664211 0011 13578899
Q ss_pred EcCcceeEE
Q psy1098 109 QASKWEWKR 117 (390)
Q Consensus 109 d~~~~~W~~ 117 (390)
|..+.+...
T Consensus 121 d~~~~~~~~ 129 (337)
T 1pby_B 121 DAETLSRRK 129 (337)
T ss_dssp ETTTTEEEE
T ss_pred ECCCCcEEE
Confidence 998776543
No 191
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=80.99 E-value=25 Score=29.94 Aligned_cols=72 Identities=14% Similarity=0.236 Sum_probs=36.1
Q ss_pred cEEEEEcCCCCCccCcEEEEecCC--CeEeecccCCCCCCCCceeeEEE-ECCEEEEEcCcccCCCccccccccccceec
Q psy1098 211 TKLIIYGGMSGNRLSDLFMLDINS--MTWQKPQILGPQPLPRSLHTACV-IGDRMFIFGGWVPILKDESRSLHEKEWKCS 287 (390)
Q Consensus 211 ~~i~v~GG~~~~~~~~v~~~d~~~--~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~ 287 (390)
+.+++.|+.+ ..+.++|+.+ ..|...... ....+..-.+++. .++++++.||.+
T Consensus 219 ~~~las~s~D----~~v~iWd~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~g~~las~~~D------------------ 275 (297)
T 2pm7_B 219 RSYMASVSQD----RTCIIWTQDNEQGPWKKTLLK-EEKFPDVLWRASWSLSGNVLALSGGD------------------ 275 (297)
T ss_dssp SEEEEEEETT----SCEEEEEESSTTSCCEEEESS-SSCCSSCEEEEEECSSSCCEEEEETT------------------
T ss_pred ceEEEEEECC----CcEEEEEeCCCCCccceeeee-cccCCCcEEEEEECCCCCEEEEEcCC------------------
Confidence 4788888776 3577777665 335432111 0111111122222 256777777652
Q ss_pred CceEEeecC-CCeeeeccc
Q psy1098 288 NQLACLHLP-EMTWEDLSV 305 (390)
Q Consensus 288 ~~~~~~d~~-~~~W~~v~~ 305 (390)
..+.+++.. ...|..+..
T Consensus 276 ~~v~lw~~~~~g~w~~~~~ 294 (297)
T 2pm7_B 276 NKVTLWKENLEGKWEPAGE 294 (297)
T ss_dssp SCEEEEEECTTSCEEEC--
T ss_pred CcEEEEEECCCCcEEeccc
Confidence 345556654 457887754
No 192
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=80.87 E-value=27 Score=30.29 Aligned_cols=44 Identities=11% Similarity=0.065 Sum_probs=23.6
Q ss_pred CceEEeecCCCeeeecccccccCCCCCCCC--Ccceeee----CCEEEEEeccCCc
Q psy1098 288 NQLACLHLPEMTWEDLSVEVTDDFLPKPRA--GHCASVI----NSRMYIWSGRDDY 337 (390)
Q Consensus 288 ~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~--~~~~~~~----~~~l~v~GG~~~~ 337 (390)
..+.+||..+..|..+.. ...... .-.++.+ ++++++.||.++.
T Consensus 271 g~v~iw~~~~~~~~~~~~------~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~ 320 (330)
T 2hes_X 271 GVLAVYEEVDGEWKVFAK------RALCHGVYEINVVKWLELNGKTILATGGDDGI 320 (330)
T ss_dssp SCEEEEEEETTEEEEEEE------ESCTTTTSCEEEEEEC-----CCEEEEETTSE
T ss_pred CEEEEEEcCCCceEEEec------cccccccceEEEEEEecCCCceEEEEecCCCc
Confidence 467788888888866543 111111 1122222 3667888888754
No 193
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=80.43 E-value=28 Score=30.08 Aligned_cols=23 Identities=13% Similarity=0.390 Sum_probs=17.5
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCe
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMT 236 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~ 236 (390)
++++++.|+.+ ..+.+||+.+.+
T Consensus 207 ~g~~l~s~~~d----g~i~iwd~~~~~ 229 (319)
T 3frx_A 207 DGTLIASAGKD----GEIMLWNLAAKK 229 (319)
T ss_dssp TSSEEEEEETT----CEEEEEETTTTE
T ss_pred CCCEEEEEeCC----CeEEEEECCCCc
Confidence 67788888876 468888988765
No 194
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=80.17 E-value=28 Score=29.94 Aligned_cols=43 Identities=9% Similarity=0.011 Sum_probs=24.3
Q ss_pred CceEEeecCCCeeeecccccccCCCCCCCCCcceeeeCCEEEEEeccCCc
Q psy1098 288 NQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVINSRMYIWSGRDDY 337 (390)
Q Consensus 288 ~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~ 337 (390)
..+.+||+.+.+-...-. ......-.+++ -++++++.||.++.
T Consensus 273 g~i~vwd~~~~~~~~~~~------~~h~~~v~~~~-~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 273 GIISCWNLQTRKKIKNFA------KFNEDSVVKIA-CSDNILCLATSDDT 315 (342)
T ss_dssp SCEEEEETTTTEEEEECC------CCSSSEEEEEE-ECSSEEEEEEECTH
T ss_pred ceEEEEcCccHhHhhhhh------cccCCCceEec-CCCCeEEEEecCCc
Confidence 478899988765322111 10011112233 67888999998876
No 195
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=80.06 E-value=48 Score=32.56 Aligned_cols=233 Identities=9% Similarity=0.026 Sum_probs=103.1
Q ss_pred eCCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCC---ceeeEEEeCCEEEEEcceeCCceeecceEEEEcCc
Q psy1098 36 IKDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGC---AAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASK 112 (390)
Q Consensus 36 ~~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~ 112 (390)
-++++|.+--........+++.+.....|+.+.....+.... ......+-+++.++++.... +.....++++|..+
T Consensus 82 dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~-G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 82 KGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSAS-GSDWVTIKFMKVDG 160 (710)
T ss_dssp ETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEET-TCSCEEEEEEETTT
T ss_pred ECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCC-CCceEEEEEEECCC
Confidence 355555553323333456788887777777654221111111 11111223455555544322 11123689999998
Q ss_pred ceeEEecCCCCCCCCCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCC
Q psy1098 113 WEWKRLKPKPPRFGSPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYG 190 (390)
Q Consensus 113 ~~W~~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~ 190 (390)
.+....... ... ...... +++.++++...............-.....++.+++.+..... ..+....
T Consensus 161 g~~~~~~~~--------~~~--~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~-~~v~~~~ 229 (710)
T 2xdw_A 161 AKELPDVLE--------RVK--FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED-ILCAEFP 229 (710)
T ss_dssp TEEEEEEEE--------EEC--SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC-EEEECCT
T ss_pred CCCCccccc--------Ccc--cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc-eEEeccC
Confidence 877654321 111 122233 444333433222100000000000223457777876532110 1110111
Q ss_pred CCCCCCceeeeEEeeccCCCcEEEEEcCCCCC-ccCcEEEEecCC------C--eEeecccCCCCCCCCceeeEEEECCE
Q psy1098 191 GLPSPRESHTACSWTDEYKNTKLIIYGGMSGN-RLSDLFMLDINS------M--TWQKPQILGPQPLPRSLHTACVIGDR 261 (390)
Q Consensus 191 ~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~-~~~~v~~~d~~~------~--~W~~~~~~~~~p~~r~~~~~~~~~~~ 261 (390)
..+.........+ +++.+++....+. ..++++++|+.+ . .+..+... ..........-++.
T Consensus 230 --~~~~~~~~~~~Sp----Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~----~~~~~~~~s~dg~~ 299 (710)
T 2xdw_A 230 --DEPKWMGGAELSD----DGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN----FEGEYDYVTNEGTV 299 (710)
T ss_dssp --TCTTCEEEEEECT----TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS----SSSCEEEEEEETTE
T ss_pred --CCCeEEEEEEEcC----CCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC----CCcEEEEEeccCCE
Confidence 1122222233332 4554444432222 246899999876 3 46664321 11111222233677
Q ss_pred EEEEcCcccCCCccccccccccceecCceEEeecCCC---eeeeccc
Q psy1098 262 MFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEM---TWEDLSV 305 (390)
Q Consensus 262 i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~W~~v~~ 305 (390)
||+.+..... ...++++|+.+. .|+.+-.
T Consensus 300 l~~~s~~~~~---------------~~~l~~~d~~~~~~~~~~~l~~ 331 (710)
T 2xdw_A 300 FTFKTNRHSP---------------NYRLINIDFTDPEESKWKVLVP 331 (710)
T ss_dssp EEEEECTTCT---------------TCEEEEEETTSCCGGGCEEEEC
T ss_pred EEEEECCCCC---------------CCEEEEEeCCCCCcccceeccC
Confidence 8887643210 357888998765 4877654
No 196
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=80.05 E-value=15 Score=31.89 Aligned_cols=64 Identities=9% Similarity=0.030 Sum_probs=37.5
Q ss_pred cEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE--CCEEEEEcCcccCCCccccccccccceecC
Q psy1098 211 TKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI--GDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 211 ~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
+.+++.|+.+ ..+.+||+.+.+-.... .. ....-.++... ++.+++.|+. -.
T Consensus 85 ~~~l~~~~~d----g~i~v~d~~~~~~~~~~--~~--~~~~i~~~~~~~~~~~~l~s~~~------------------dg 138 (366)
T 3k26_A 85 HPLLAVAGSR----GIIRIINPITMQCIKHY--VG--HGNAINELKFHPRDPNLLLSVSK------------------DH 138 (366)
T ss_dssp CEEEEEEETT----CEEEEECTTTCCEEEEE--ES--CCSCEEEEEECSSCTTEEEEEET------------------TS
T ss_pred CCEEEEecCC----CEEEEEEchhceEeeee--cC--CCCcEEEEEECCCCCCEEEEEeC------------------CC
Confidence 6788888876 36888888765433211 01 11111222222 5677777775 35
Q ss_pred ceEEeecCCCee
Q psy1098 289 QLACLHLPEMTW 300 (390)
Q Consensus 289 ~~~~~d~~~~~W 300 (390)
.+.++|+.+.+-
T Consensus 139 ~i~iwd~~~~~~ 150 (366)
T 3k26_A 139 ALRLWNIQTDTL 150 (366)
T ss_dssp CEEEEETTTTEE
T ss_pred eEEEEEeecCeE
Confidence 788899887654
No 197
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=79.69 E-value=27 Score=29.47 Aligned_cols=25 Identities=0% Similarity=-0.288 Sum_probs=14.1
Q ss_pred eCCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 85 DNTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 85 ~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
.++..++.|+.+ ..+.+||..+..-
T Consensus 27 ~~~~~l~s~~~d------g~v~vw~~~~~~~ 51 (313)
T 3odt_A 27 VDDSKVASVSRD------GTVRLWSKDDQWL 51 (313)
T ss_dssp EETTEEEEEETT------SEEEEEEESSSEE
T ss_pred cCCCEEEEEEcC------CcEEEEECCCCEE
Confidence 344455666542 2467777766543
No 198
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=78.65 E-value=37 Score=30.48 Aligned_cols=61 Identities=13% Similarity=0.223 Sum_probs=34.4
Q ss_pred eEEEECCC--CcEEeeeecCCCCCCCceeeEEEe---CCEEEEEcceeCCceeecceEEEEcCcceeEEecC
Q psy1098 54 LHVFNTAT--NQWFIPTLKGDIPPGCAAYGIVVD---NTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKP 120 (390)
Q Consensus 54 ~~~~d~~~--~~W~~~~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~ 120 (390)
++.++... .+|+.+.. .+....-++++.. .+.||+.+... ..-.-+++.+-...+|+++..
T Consensus 33 l~~~~~~~~g~~W~~~~~---~~~~~~v~~i~~dp~~~~~l~~g~~~g---~~g~gl~~s~D~G~tW~~~~~ 98 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGP---VFLGHTIHHIVQDPREPERMLMAARTG---HLGPTVFRSDDGGGNWTEATR 98 (394)
T ss_dssp EEEEEECTTSCSEEEEEE---ESTTSEEEEEEECSSSTTCEEEEEEC-----CCEEEEEESSTTSCCEECSB
T ss_pred eEEEECCCCCCCceECCc---cCCCCceEEEEECCCCCCeEEEEecCC---CCCccEEEeCCCCCCceECCc
Confidence 77777655 68987641 1122233445544 45677754321 011247777777788998764
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=78.55 E-value=54 Score=32.37 Aligned_cols=232 Identities=8% Similarity=-0.020 Sum_probs=101.5
Q ss_pred eCCEEEEEccCCCCcccceEEEECC---CCcEEeeeecCCCCCCC--ceee-EEEeCCEEEEEcceeCCceeecceEEEE
Q psy1098 36 IKDLMLVFGGGNEGIVEELHVFNTA---TNQWFIPTLKGDIPPGC--AAYG-IVVDNTRVLIFGGMVEYGKYSSDLYELQ 109 (390)
Q Consensus 36 ~~~~iyv~GG~~~~~~~~~~~~d~~---~~~W~~~~~~~~~p~~r--~~~~-~~~~~~~iyv~GG~~~~~~~~~~v~~~d 109 (390)
-++++|.+--........+|+.+.. ...|+.+.....+.... .... ..+-+++.++++...... -...++++|
T Consensus 117 dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~-e~~~i~v~d 195 (741)
T 1yr2_A 117 RGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGS-DWRTVKFVG 195 (741)
T ss_dssp ETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTC-SEEEEEEEE
T ss_pred ECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCC-ceEEEEEEE
Confidence 3555655543333334677888876 67777764221111111 1111 122345555555443211 124689999
Q ss_pred cCcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccC
Q psy1098 110 ASKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTY 189 (390)
Q Consensus 110 ~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~ 189 (390)
..+.+....... ........-.-++.|++ +.............. .....++.+++.+..... ..+...
T Consensus 196 l~tg~~~~~~~~--------~~~~~~~~wspD~~l~~-~~~~~~~~~~~~~~~--~~~~~v~~~~lgt~~~~~-~lv~~~ 263 (741)
T 1yr2_A 196 VADGKPLADELK--------WVKFSGLAWLGNDALLY-SRFAEPKEGQAFQAL--NYNQTVWLHRLGTPQSAD-QPVFAT 263 (741)
T ss_dssp TTTCCEEEEEEE--------EEESCCCEESTTSEEEE-EECCCC--------C--CCCCEEEEEETTSCGGGC-EEEECC
T ss_pred CCCCCCCCccCC--------CceeccEEEECCCEEEE-EEecCcccccccccC--CCCCEEEEEECCCCchhC-EEEecc
Confidence 998876543210 11111111111333433 332211000000000 223457777776532111 111101
Q ss_pred CCCCCCCceeeeEEeeccCCCcEEEEEcCCCC-CccCcEEEEecCCC--e-EeecccCCCCCCCCceeeEEEECCEEEEE
Q psy1098 190 GGLPSPRESHTACSWTDEYKNTKLIIYGGMSG-NRLSDLFMLDINSM--T-WQKPQILGPQPLPRSLHTACVIGDRMFIF 265 (390)
Q Consensus 190 ~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~-~~~~~v~~~d~~~~--~-W~~~~~~~~~p~~r~~~~~~~~~~~i~i~ 265 (390)
...+.........+ +++.+++....+ ...++++++|+.+. . |+.+... ..... ......++.||+.
T Consensus 264 --~~~~~~~~~~~~Sp----DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~---~~~~~-~~~~~dg~~l~~~ 333 (741)
T 1yr2_A 264 --PELPKRGHGASVSS----DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD---LKAQW-DFVDGVGDQLWFV 333 (741)
T ss_dssp --TTCTTCEEEEEECT----TSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS---SSSCE-EEEEEETTEEEEE
T ss_pred --CCCCeEEEEEEECC----CCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC---CCceE-EEEeccCCEEEEE
Confidence 11111222222222 554444433222 13468999999876 6 7775321 11111 1222346677776
Q ss_pred cCcccCCCccccccccccceecCceEEeecCC--Ceeeeccc
Q psy1098 266 GGWVPILKDESRSLHEKEWKCSNQLACLHLPE--MTWEDLSV 305 (390)
Q Consensus 266 GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~W~~v~~ 305 (390)
...... ...++++|+.+ ..|+.+-+
T Consensus 334 s~~~~~---------------~~~l~~~d~~~~~~~~~~l~~ 360 (741)
T 1yr2_A 334 SGDGAP---------------LKKIVRVDLSGSTPRFDTVVP 360 (741)
T ss_dssp ECTTCT---------------TCEEEEEECSSSSCEEEEEEC
T ss_pred ECCCCC---------------CCEEEEEeCCCCccccEEEec
Confidence 432110 35789999887 57887754
No 200
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=77.45 E-value=27 Score=28.22 Aligned_cols=62 Identities=11% Similarity=0.209 Sum_probs=38.1
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEee-----cccCCCCCCCCceeeEEEE-CC-EEEEEcCcccCCCccccccccc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQK-----PQILGPQPLPRSLHTACVI-GD-RMFIFGGWVPILKDESRSLHEK 282 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~-----~~~~~~~p~~r~~~~~~~~-~~-~i~i~GG~~~~~~~~~~~~~~~ 282 (390)
++++|+|-| +..|+||..+.+-.. +..-..+| ..-.++... ++ ++|+|-|
T Consensus 109 ~g~~yfFkG------~~yw~yd~~~~~v~~gyPk~i~~~~gip--~~idaAf~~~~~~~~YfFkg--------------- 165 (196)
T 3c7x_A 109 NGKTYFFRG------NKYYRFNEELRAVDSEYPKNIKVWEGIP--ESPRGSFMGSDEVFTYFYKG--------------- 165 (196)
T ss_dssp TTEEEEEET------TEEEEEETTTTEECTTCSEEGGGSBTCC--SSCSEEEECTTSSEEEEEET---------------
T ss_pred CCEEEEEEC------CEEEEEeCCcccccCCCCccHHHCCCcC--CCcceeEEecCCCEEEEEEC---------------
Confidence 689999987 578999987764332 11011122 222333333 44 8999976
Q ss_pred cceecCceEEeecCCCe
Q psy1098 283 EWKCSNQLACLHLPEMT 299 (390)
Q Consensus 283 ~~~~~~~~~~~d~~~~~ 299 (390)
+..|+||..+.+
T Consensus 166 -----~~y~r~d~~~~~ 177 (196)
T 3c7x_A 166 -----NKYWKFNNQKLK 177 (196)
T ss_dssp -----TEEEEEETTTTE
T ss_pred -----CEEEEEECCcce
Confidence 367889987765
No 201
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=77.14 E-value=28 Score=28.36 Aligned_cols=65 Identities=9% Similarity=0.104 Sum_probs=41.3
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEee-----cc-cCCCCCCCCceeeEEEECCEEEEEcCcccCCCcccccccccc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQK-----PQ-ILGPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRSLHEKE 283 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~-----~~-~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~ 283 (390)
++++|+|-| +..|+||..+.+-.. +. .-..+| ..-.++...++++|+|-|
T Consensus 127 ~gk~yfFkG------~~ywr~d~~~~~~d~gyPr~i~~~~~Gip--~~iDaAf~~~g~~YfFkg---------------- 182 (207)
T 1pex_A 127 TGKTLLFSG------NQVWRYDDTNHIMDKDYPRLIEEDFPGIG--DKVDAVYEKNGYIYFFNG---------------- 182 (207)
T ss_dssp TSEEEEEET------TEEEEEETTTTEECSSCCCBHHHHSTTSC--SCCSEEEEETTEEEEEET----------------
T ss_pred CCEEEEEeC------CEEEEEeCcCccccCCCCccHHHcCCCCC--CCccEEEEcCCcEEEEEC----------------
Confidence 589999987 678999987654331 00 011122 222344456899999977
Q ss_pred ceecCceEEeecCCCeeee
Q psy1098 284 WKCSNQLACLHLPEMTWED 302 (390)
Q Consensus 284 ~~~~~~~~~~d~~~~~W~~ 302 (390)
+..|+||..+.+-..
T Consensus 183 ----~~y~rf~~~~~~v~~ 197 (207)
T 1pex_A 183 ----PIQFEYSIWSNRIVR 197 (207)
T ss_dssp ----TEEEEEETTTTEEEE
T ss_pred ----CEEEEEeCCccEEec
Confidence 377888887766443
No 202
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=76.31 E-value=56 Score=31.31 Aligned_cols=59 Identities=10% Similarity=0.086 Sum_probs=33.1
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEE--eCCEEEEEcceeCCceeecceEEEEcC
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVV--DNTRVLIFGGMVEYGKYSSDLYELQAS 111 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~~d~~ 111 (390)
++.+||.... .+.+.++|..+.+-.... +....-|.++. .+..+|+.+ . ...+..+|+.
T Consensus 166 ~~~~~V~~~~----~~~V~viD~~t~~v~~~i-----~~g~~p~~v~~SpDGr~lyv~~-~------dg~V~viD~~ 226 (567)
T 1qks_A 166 ENLFSVTLRD----AGQIALIDGSTYEIKTVL-----DTGYAVHISRLSASGRYLFVIG-R------DGKVNMIDLW 226 (567)
T ss_dssp GGEEEEEETT----TTEEEEEETTTCCEEEEE-----ECSSCEEEEEECTTSCEEEEEE-T------TSEEEEEETT
T ss_pred CceEEEEeCC----CCeEEEEECCCCeEEEEE-----eCCCCccceEECCCCCEEEEEc-C------CCeEEEEECC
Confidence 4566766542 356899999887654322 12222233333 245677753 2 1358899985
No 203
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=76.31 E-value=61 Score=31.73 Aligned_cols=62 Identities=15% Similarity=0.253 Sum_probs=34.4
Q ss_pred CCCCCCCc--eeEEecCCCCCCCCCCCceeeeEEeCCEEEEEccCC-CCcccceEEEECCCCc--EEee
Q psy1098 4 LSDDNCPV--YRWRRIDDPAGPQPRPRHGHRAVAIKDLMLVFGGGN-EGIVEELHVFNTATNQ--WFIP 67 (390)
Q Consensus 4 ~~~~~~~~--~~W~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~-~~~~~~~~~~d~~~~~--W~~~ 67 (390)
|.++|..+ ..|+.-... .........+.++.++.+|+..+.. ......++.||..+++ |+.-
T Consensus 129 l~alD~~tG~~~W~~~~~~--~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 129 LIALDAKTGKAIWSQQTTD--PAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEEETTTCCEEEEEECSC--TTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEeeeeccCC--CCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 45566654 478865421 1111222334456688877754321 2245679999998776 7653
No 204
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=75.56 E-value=39 Score=29.16 Aligned_cols=68 Identities=6% Similarity=-0.003 Sum_probs=34.2
Q ss_pred CEEEEEccCCCCcccceEEEECCCCcEEe-eeecCCCCCCCceeeEEEe-CCEEEEEcceeCCceeecceEEEEcCccee
Q psy1098 38 DLMLVFGGGNEGIVEELHVFNTATNQWFI-PTLKGDIPPGCAAYGIVVD-NTRVLIFGGMVEYGKYSSDLYELQASKWEW 115 (390)
Q Consensus 38 ~~iyv~GG~~~~~~~~~~~~d~~~~~W~~-~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W 115 (390)
+.+++.|+.+ ..+.+||..+..... ....+ ....-.+++.. +++.++.|+.+ ..+.++|..+.+.
T Consensus 54 g~~l~~~~~d----g~i~iw~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~ 120 (368)
T 3mmy_A 54 GNFLIAGSWA----NDVRCWEVQDSGQTIPKAQQM---HTGPVLDVCWSDDGSKVFTASCD------KTAKMWDLSSNQA 120 (368)
T ss_dssp SEEEEEEETT----SEEEEEEECTTSCEEEEEEEE---CSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEE
T ss_pred ceEEEEECCC----CcEEEEEcCCCCceeEEEecc---ccCCEEEEEECcCCCEEEEEcCC------CcEEEEEcCCCCc
Confidence 3777777743 347888887633222 11110 11111222222 44556666542 3477888888765
Q ss_pred EEe
Q psy1098 116 KRL 118 (390)
Q Consensus 116 ~~~ 118 (390)
...
T Consensus 121 ~~~ 123 (368)
T 3mmy_A 121 IQI 123 (368)
T ss_dssp EEE
T ss_pred eee
Confidence 544
No 205
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=75.26 E-value=49 Score=30.12 Aligned_cols=65 Identities=9% Similarity=0.073 Sum_probs=37.7
Q ss_pred cEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCcccCCCccccccccccceecCce
Q psy1098 211 TKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSNQL 290 (390)
Q Consensus 211 ~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~ 290 (390)
+++++.|+.+ ..|.+||+.+.+.......+ ........+.. ++++++.|+. -..+
T Consensus 210 ~~~l~s~~~d----~~i~vwd~~~~~~~~~~~~~--h~~~v~~~~~s-d~~~l~s~~~------------------d~~v 264 (450)
T 2vdu_B 210 HQFIITSDRD----EHIKISHYPQCFIVDKWLFG--HKHFVSSICCG-KDYLLLSAGG------------------DDKI 264 (450)
T ss_dssp CEEEEEEETT----SCEEEEEESCTTCEEEECCC--CSSCEEEEEEC-STTEEEEEES------------------SSEE
T ss_pred CcEEEEEcCC----CcEEEEECCCCceeeeeecC--CCCceEEEEEC-CCCEEEEEeC------------------CCeE
Confidence 7888888875 46888888766433210011 11111222222 7777777774 3577
Q ss_pred EEeecCCCee
Q psy1098 291 ACLHLPEMTW 300 (390)
Q Consensus 291 ~~~d~~~~~W 300 (390)
.+||+.+.+.
T Consensus 265 ~vwd~~~~~~ 274 (450)
T 2vdu_B 265 FAWDWKTGKN 274 (450)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCcE
Confidence 8888877653
No 206
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=75.12 E-value=45 Score=29.71 Aligned_cols=24 Identities=17% Similarity=0.189 Sum_probs=17.5
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeE
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTW 237 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W 237 (390)
++++++.|+.+ ..+.+||+.+..-
T Consensus 218 ~~~~l~~~s~d----~~v~iwd~~~~~~ 241 (393)
T 1erj_A 218 DGKYIAAGSLD----RAVRVWDSETGFL 241 (393)
T ss_dssp TCCEEEEEETT----SCEEEEETTTCCE
T ss_pred CCCEEEEEcCC----CcEEEEECCCCcE
Confidence 56788888776 4588888887653
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=74.67 E-value=42 Score=29.12 Aligned_cols=66 Identities=14% Similarity=0.088 Sum_probs=39.7
Q ss_pred CEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcceeEE
Q psy1098 38 DLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKWEWKR 117 (390)
Q Consensus 38 ~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~ 117 (390)
+.+|+.+.. ...+++||+.+++...+. .+. ........-++++++... ..+++||+.+.+...
T Consensus 61 ~~l~~~d~~----~~~i~~~d~~~~~~~~~~----~~~-~v~~i~~~~dg~l~v~~~--------~gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 61 GTAWWFNIL----ERELHELHLASGRKTVHA----LPF-MGSALAKISDSKQLIASD--------DGLFLRDTATGVLTL 123 (326)
T ss_dssp TEEEEEEGG----GTEEEEEETTTTEEEEEE----CSS-CEEEEEEEETTEEEEEET--------TEEEEEETTTCCEEE
T ss_pred CEEEEEECC----CCEEEEEECCCCcEEEEE----CCC-cceEEEEeCCCeEEEEEC--------CCEEEEECCCCcEEE
Confidence 567776543 246899999887765543 121 112222334677777531 248899998887776
Q ss_pred ecC
Q psy1098 118 LKP 120 (390)
Q Consensus 118 ~~~ 120 (390)
+..
T Consensus 124 ~~~ 126 (326)
T 2ghs_A 124 HAE 126 (326)
T ss_dssp EEC
T ss_pred Eee
Confidence 643
No 208
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=74.45 E-value=68 Score=31.43 Aligned_cols=64 Identities=13% Similarity=0.193 Sum_probs=34.5
Q ss_pred CCCCCCCc--eeEEecCCCCCCCCCCCceeeeEEeCCEEEEEccCC-CCcccceEEEECCCCc--EEeee
Q psy1098 4 LSDDNCPV--YRWRRIDDPAGPQPRPRHGHRAVAIKDLMLVFGGGN-EGIVEELHVFNTATNQ--WFIPT 68 (390)
Q Consensus 4 ~~~~~~~~--~~W~~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~-~~~~~~~~~~d~~~~~--W~~~~ 68 (390)
|.++|..+ ..|+.-.... .........+.++.++.+|+..+.. ......++.||..+++ |+.-.
T Consensus 140 l~alD~~tG~~~W~~~~~~~-~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 140 LIALDAATGKEVWHQNTFEG-QKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp EEEEETTTCCEEEEEETTTT-CCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred EEEEECCCCCEEeeecCCcC-cCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 45566654 4788653200 1011122233445678777765422 2245679999998776 76543
No 209
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=74.01 E-value=36 Score=28.00 Aligned_cols=52 Identities=17% Similarity=0.319 Sum_probs=30.8
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecc---cC-CCCCCCCceeeEEEEC--CEEEEEcC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQ---IL-GPQPLPRSLHTACVIG--DRMFIFGG 267 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~---~~-~~~p~~r~~~~~~~~~--~~i~i~GG 267 (390)
++++|+|-| +..|+||..+.+-..-- .. .-+..+..-.++...+ +.+|+|=|
T Consensus 135 ~g~~YfFkG------~~ywr~d~~~~~v~~gyPr~i~~~w~g~p~~idaAf~~~~~g~~YfFkg 192 (218)
T 1gen_A 135 NKKTYIFAG------DKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKG 192 (218)
T ss_dssp TTEEEEEET------TEEEEEETTTTEECSSCCEEHHHHSSSCCSSCSEEEECTTTCEEEEEET
T ss_pred CCeEEEEEC------CEEEEEECccccccCCCCcchhhccCCCCCCCCEEEEEcCCCcEEEEEC
Confidence 789999987 57899998876533210 00 0111222233444444 89999976
No 210
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=73.71 E-value=48 Score=29.36 Aligned_cols=53 Identities=17% Similarity=0.194 Sum_probs=28.8
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCC---CCCceeeEEEECCEEEEEcCc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQP---LPRSLHTACVIGDRMFIFGGW 268 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p---~~r~~~~~~~~~~~i~i~GG~ 268 (390)
++++++.|+.+ ..+.+||..+.+-... ..... ..+....+..-+++.++.|+.
T Consensus 309 ~g~~l~~g~~d----g~i~vwd~~~~~~~~~--~~~~~~~h~~~v~~l~~s~dg~~l~sgs~ 364 (380)
T 3iz6_a 309 SGRLLFAGYSN----GDCYVWDTLLAEMVLN--LGTLQNSHEGRISCLGLSSDGSALCTGSW 364 (380)
T ss_dssp SSSEEEEECTT----SCEEEEETTTCCEEEE--ECCSCSSCCCCCCEEEECSSSSEEEEECT
T ss_pred CCCEEEEEECC----CCEEEEECCCCceEEE--EecccCCCCCceEEEEECCCCCEEEEeeC
Confidence 67777787765 4688999876553321 11111 111111222236778888886
No 211
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=73.44 E-value=42 Score=28.57 Aligned_cols=52 Identities=10% Similarity=0.040 Sum_probs=28.9
Q ss_pred ccceEEEECCCCcEEeeeecCCCCCCCceeeEEE--eCCEEEEEcceeCCceeecceEEEEcCcceeE
Q psy1098 51 VEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVV--DNTRVLIFGGMVEYGKYSSDLYELQASKWEWK 116 (390)
Q Consensus 51 ~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~ 116 (390)
...+.+||..+.+.......+. .-..++. .++.||+.+ ..++++|+.+.+-.
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~---------~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEAPR-----QITMLAWARDGSKLYGLG---------RDLHVMDPEAGTLV 167 (337)
T ss_dssp CCEEEEEETTTTEEEEEEECCS-----SCCCEEECTTSSCEEEES---------SSEEEEETTTTEEE
T ss_pred CceEEEEECCCCcEEEEEeCCC-----CcceeEECCCCCEEEEeC---------CeEEEEECCCCcEe
Confidence 3678899998776543321111 1122222 234466652 35889999877644
No 212
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=73.26 E-value=54 Score=29.78 Aligned_cols=24 Identities=17% Similarity=0.253 Sum_probs=16.5
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeE
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTW 237 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W 237 (390)
++++++.|+.+ ..|.+||+.+.+.
T Consensus 251 d~~~l~s~~~d----~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 251 KDYLLLSAGGD----DKIFAWDWKTGKN 274 (450)
T ss_dssp STTEEEEEESS----SEEEEEETTTCCE
T ss_pred CCCEEEEEeCC----CeEEEEECCCCcE
Confidence 45566777654 4688888887653
No 213
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=72.74 E-value=76 Score=31.19 Aligned_cols=127 Identities=12% Similarity=0.183 Sum_probs=67.1
Q ss_pred eEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCC-----CCCceeeeEEeeccCCC
Q psy1098 136 SFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLP-----SPRESHTACSWTDEYKN 210 (390)
Q Consensus 136 ~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p-----~~r~~~~~~~~~~~~~~ 210 (390)
+-++.++.||+.... +.++.+|..+.+ ..|+.-....... ......+.++. +
T Consensus 65 ~P~v~~g~vyv~~~~-----------------~~v~AlD~~tG~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 121 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPF-----------------SVVYALDARDGR-LIWKYDPQSDRHRAGEACCDAVNRGVAVW-----K 121 (689)
T ss_dssp CCEEETTEEEEECGG-----------------GCEEEEETTTCC-EEEEECCCCCGGGGGGCTTCSCCCCCEEE-----T
T ss_pred cCEEECCEEEEEcCC-----------------CeEEEEECCCCc-eeEEEcCCCCccccccccccCCCCccEEE-----C
Confidence 335678999986542 237888887754 5698622111000 00011223344 7
Q ss_pred cEEEEEcCCCCCccCcEEEEecCCCe--EeecccCCCCCCCCceeeEEEECCEEEEEcCcccCCCccccccccccceecC
Q psy1098 211 TKLIIYGGMSGNRLSDLFMLDINSMT--WQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 211 ~~i~v~GG~~~~~~~~v~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
++||+... + ..++.+|.++.+ |+...............+-++.++++|+-.+..... ...
T Consensus 122 g~v~v~~~-d----g~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~-------------~~g 183 (689)
T 1yiq_A 122 GKVYVGVL-D----GRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFG-------------VRG 183 (689)
T ss_dssp TEEEEECT-T----SEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTC-------------CBC
T ss_pred CEEEEEcc-C----CEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccC-------------CCC
Confidence 88877642 2 468899988764 887321010011112223455688887743211000 135
Q ss_pred ceEEeecCCCe--eeec
Q psy1098 289 QLACLHLPEMT--WEDL 303 (390)
Q Consensus 289 ~~~~~d~~~~~--W~~v 303 (390)
.++.||.++.+ |+.-
T Consensus 184 ~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 184 YVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCcEEEEec
Confidence 78999998765 8753
No 214
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=72.60 E-value=64 Score=30.26 Aligned_cols=50 Identities=8% Similarity=-0.033 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGW 268 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~ 268 (390)
+++.++.++.+ ..+.+||.....-..+.. ....-.+++.. ++++++.|+.
T Consensus 437 d~~~l~~~~~d----~~v~~w~~~~~~~~~~~~-----~~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 437 DDQTIASASDD----KTVKLWNRNGQLLQTLTG-----HSSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp TSSEEEEEETT----SEEEEEETTSCEEEEEEC-----CSSCEEEEEECTTSCEEEEEET
T ss_pred CCCEEEEEcCC----CEEEEEECCCCEEEEEcC-----CCCCEEEEEEcCCCCEEEEEeC
Confidence 56677777665 357788866544433221 11111222222 6777777764
No 215
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=72.43 E-value=27 Score=30.08 Aligned_cols=67 Identities=13% Similarity=0.179 Sum_probs=40.1
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CC-EEEEEcCcccCCCccccccccccceec
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GD-RMFIFGGWVPILKDESRSLHEKEWKCS 287 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~-~i~i~GG~~~~~~~~~~~~~~~~~~~~ 287 (390)
++++|+.++.+ ..|+++|+.+.+.......+. ....+..+.. ++ .+|+.+.. .
T Consensus 10 ~~~~~v~~~~~----~~v~~~d~~~~~~~~~~~~~~---~~~~~~~~~s~dg~~~~v~~~~------------------~ 64 (349)
T 1jmx_B 10 GHEYMIVTNYP----NNLHVVDVASDTVYKSCVMPD---KFGPGTAMMAPDNRTAYVLNNH------------------Y 64 (349)
T ss_dssp TCEEEEEEETT----TEEEEEETTTTEEEEEEECSS---CCSSCEEEECTTSSEEEEEETT------------------T
T ss_pred CCEEEEEeCCC----CeEEEEECCCCcEEEEEecCC---CCCCceeEECCCCCEEEEEeCC------------------C
Confidence 67788887654 579999999887554221111 0011233333 44 57776542 3
Q ss_pred CceEEeecCCCeee
Q psy1098 288 NQLACLHLPEMTWE 301 (390)
Q Consensus 288 ~~~~~~d~~~~~W~ 301 (390)
..++++|+.+.+-.
T Consensus 65 ~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 65 GDIYGIDLDTCKNT 78 (349)
T ss_dssp TEEEEEETTTTEEE
T ss_pred CcEEEEeCCCCcEE
Confidence 57899999887654
No 216
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=71.94 E-value=45 Score=28.28 Aligned_cols=22 Identities=14% Similarity=-0.041 Sum_probs=15.0
Q ss_pred cEEEEEcCCCCCccCcEEEEecCCCe
Q psy1098 211 TKLIIYGGMSGNRLSDLFMLDINSMT 236 (390)
Q Consensus 211 ~~i~v~GG~~~~~~~~v~~~d~~~~~ 236 (390)
+.+++.|+.+ ..+.+||+.+.+
T Consensus 124 ~~~l~~~~~d----g~v~iwd~~~~~ 145 (351)
T 3f3f_A 124 GLKLACLGND----GILRLYDALEPS 145 (351)
T ss_dssp CSEEEEEETT----CEEEEEECSSTT
T ss_pred CcEEEEecCC----CcEEEecCCChH
Confidence 6677777765 357888876543
No 217
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=71.86 E-value=72 Score=30.55 Aligned_cols=26 Identities=8% Similarity=0.184 Sum_probs=19.5
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEee
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQK 239 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~ 239 (390)
+++.++.|+.+ ..+.++|+.+.+...
T Consensus 250 dg~~l~s~s~D----~~v~lWd~~~~~~~~ 275 (611)
T 1nr0_A 250 DGTKIASASAD----KTIKIWNVATLKVEK 275 (611)
T ss_dssp TSSEEEEEETT----SEEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC----CeEEEEeCCCCceee
Confidence 67778888776 468889998877654
No 218
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=71.72 E-value=38 Score=27.29 Aligned_cols=64 Identities=16% Similarity=0.238 Sum_probs=35.6
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEe---ecccCC-CCCCCCceeeEEE-ECCEEEEEcCcccCCCccccccccccc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQ---KPQILG-PQPLPRSLHTACV-IGDRMFIFGGWVPILKDESRSLHEKEW 284 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~---~~~~~~-~~p~~r~~~~~~~-~~~~i~i~GG~~~~~~~~~~~~~~~~~ 284 (390)
++++|+|-| +..|+|+..+.... .+.... .+|......+... .++++|+|-|
T Consensus 61 ~g~~yfFkg------~~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG----------------- 117 (196)
T 3c7x_A 61 DGKFVFFKG------DKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG----------------- 117 (196)
T ss_dssp TSCEEEEET------TEEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-----------------
T ss_pred CCcEEEecC------CEEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-----------------
Confidence 788999977 56889975421110 111111 1332222222221 2589999977
Q ss_pred eecCceEEeecCCCe
Q psy1098 285 KCSNQLACLHLPEMT 299 (390)
Q Consensus 285 ~~~~~~~~~d~~~~~ 299 (390)
+..|+||..+++
T Consensus 118 ---~~yw~yd~~~~~ 129 (196)
T 3c7x_A 118 ---NKYYRFNEELRA 129 (196)
T ss_dssp ---TEEEEEETTTTE
T ss_pred ---CEEEEEeCCccc
Confidence 367889887654
No 219
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=71.58 E-value=54 Score=29.02 Aligned_cols=21 Identities=10% Similarity=0.191 Sum_probs=14.6
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINS 234 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~ 234 (390)
+++.++.|+.++ .+.++++..
T Consensus 355 dg~~l~sgs~D~----~i~iW~~~~ 375 (380)
T 3iz6_a 355 DGSALCTGSWDK----NLKIWAFSG 375 (380)
T ss_dssp SSSEEEEECTTS----CEEEEECCS
T ss_pred CCCEEEEeeCCC----CEEEEecCC
Confidence 677888888763 466666553
No 220
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=70.30 E-value=58 Score=31.44 Aligned_cols=127 Identities=12% Similarity=0.193 Sum_probs=64.8
Q ss_pred ceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeec-CCCceeeeeccccCCC--CCCC---CceeeeEE--eec
Q psy1098 135 HSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLEL-KSGHTTVWDMPGTYGG--LPSP---RESHTACS--WTD 206 (390)
Q Consensus 135 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~W~~~~~~~~--~p~~---r~~~~~~~--~~~ 206 (390)
.+-++.++.||+.+.... .++.+|. .+.+ ..|+.-..... .+.. ......++ .
T Consensus 56 ~tP~v~~g~vyv~~~~~~----------------~v~AlD~~~tG~-~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~-- 116 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFPN----------------NTFALGLDDPGT-ILWQDKPKQNPAARAVACCDLVNRGLAYWPG-- 116 (599)
T ss_dssp SCCEEETTEEEEECSTTT----------------CEEEEETTCTTS-EEEEECCCCCGGGGGGCSSCSCCCCCEEECC--
T ss_pred eccEEECCEEEEEeCCCC----------------EEEEEeCCCCCc-EEEEECCCCCccccccccccccccceEEEec--
Confidence 344566899998765221 3788888 6653 56987321110 0000 01112233 2
Q ss_pred cCCCcE----EEEEcCCCCCccCcEEEEecCCCe--EeecccCCCCC-CCCceeeEEEECCEEEEEcCcccCCCcccccc
Q psy1098 207 EYKNTK----LIIYGGMSGNRLSDLFMLDINSMT--WQKPQILGPQP-LPRSLHTACVIGDRMFIFGGWVPILKDESRSL 279 (390)
Q Consensus 207 ~~~~~~----i~v~GG~~~~~~~~v~~~d~~~~~--W~~~~~~~~~p-~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~ 279 (390)
+++ ||+... + ..++.+|..+.+ |+.-. .... ......+-++.+++||+-.+....
T Consensus 117 ---~g~~~~rV~v~t~-d----g~l~AlDa~TG~~~W~~~~--~~~~~~~~~~ssP~v~~g~V~vg~~g~e~-------- 178 (599)
T 1w6s_A 117 ---DGKTPALILKTQL-D----GNVAALNAETGETVWKVEN--SDIKVGSTLTIAPYVVKDKVIIGSSGAEL-------- 178 (599)
T ss_dssp ---CSSSCCEEEEECT-T----SEEEEEETTTCCEEEEEEC--CCGGGTCBCCSCCEEETTEEEECCBCGGG--------
T ss_pred ---CCcceeEEEEEcC-C----CEEEEEECCCCCEEEeecC--CCCCccceeecCCEEECCEEEEEeccccc--------
Confidence 444 776542 2 468899987765 88621 1100 001122334568877764321100
Q ss_pred ccccceecCceEEeecCCCe--eeec
Q psy1098 280 HEKEWKCSNQLACLHLPEMT--WEDL 303 (390)
Q Consensus 280 ~~~~~~~~~~~~~~d~~~~~--W~~v 303 (390)
.....++.||.++.+ |+.-
T Consensus 179 -----g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 179 -----GVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp -----TCCCEEEEEETTTCCEEEEEE
T ss_pred -----CCCCeEEEEECCCCcEEEEEc
Confidence 013578899988664 7653
No 221
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=70.25 E-value=83 Score=30.60 Aligned_cols=31 Identities=19% Similarity=0.075 Sum_probs=19.2
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeec
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKP 240 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~ 240 (390)
+++++++....+.....++++|+.+.+...+
T Consensus 265 Dg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 265 STKVAVTWLNRAQNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp SSEEEEEEEETTSCEEEEEEEETTTCCEEEE
T ss_pred CCeEEEEEEcCCCCeEEEEEEeCCCCcceEE
Confidence 6776655433222335689999988776553
No 222
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=69.06 E-value=73 Score=29.50 Aligned_cols=65 Identities=6% Similarity=0.020 Sum_probs=41.4
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEee-----cc-cCCCCCCCCceeeEEEECCEEEEEcCcccCCCcccccccccc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQK-----PQ-ILGPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRSLHEKE 283 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~-----~~-~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~ 283 (390)
++++|+|-| +..|+||..+.+-.. +. .-...| ..--+++..++++|+|-|
T Consensus 367 ~~k~yfFkG------~~yw~yd~~~~~~~~gYPk~I~~~fpgip--~~iDAA~~~~g~~YFFkg---------------- 422 (450)
T 1su3_A 367 TGKTYFFVA------NKYWRYDEYKRSMDPGYPKMIAHDFPGIG--HKVDAVFMKDGFFYFFHG---------------- 422 (450)
T ss_dssp TTEEEEEET------TEEEEEETTTTEECSSCSEEHHHHSTTSC--SCCSEEEEETTEEEEEET----------------
T ss_pred CCeEEEEeC------CEEEEEeCCCccccCCCCcchhhcCCCCC--CCccEEEEcCCeEEEEeC----------------
Confidence 689999987 679999977544322 10 011122 222344456899999977
Q ss_pred ceecCceEEeecCCCeeee
Q psy1098 284 WKCSNQLACLHLPEMTWED 302 (390)
Q Consensus 284 ~~~~~~~~~~d~~~~~W~~ 302 (390)
+..|+||..+.+-..
T Consensus 423 ----~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 423 ----TRQYKFDPKTKRILT 437 (450)
T ss_dssp ----TEEEEEETTTTEEEE
T ss_pred ----CEEEEEECCcceEec
Confidence 367899987776544
No 223
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=69.03 E-value=91 Score=30.60 Aligned_cols=126 Identities=12% Similarity=0.152 Sum_probs=68.7
Q ss_pred eeeEEeCCEEEEEccCCCCcccceEEEECCCCc--EEeeeecCCC--CCC---CceeeEEEeCCEEEEEcceeCCceeec
Q psy1098 31 HRAVAIKDLMLVFGGGNEGIVEELHVFNTATNQ--WFIPTLKGDI--PPG---CAAYGIVVDNTRVLIFGGMVEYGKYSS 103 (390)
Q Consensus 31 ~~~~~~~~~iyv~GG~~~~~~~~~~~~d~~~~~--W~~~~~~~~~--p~~---r~~~~~~~~~~~iyv~GG~~~~~~~~~ 103 (390)
.+-++.++.||+... ...++.+|..+++ |+.-...... +.. ....+.+..+++||+.... .
T Consensus 64 ~~P~v~~g~vyv~~~-----~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d-------g 131 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGP-----FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD-------G 131 (689)
T ss_dssp CCCEEETTEEEEECG-----GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT-------S
T ss_pred ecCEEECCEEEEEcC-----CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC-------C
Confidence 344567899998765 3568999987766 7653211000 000 0112345678888885421 3
Q ss_pred ceEEEEcCcc--eeEEecC-CCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCce
Q psy1098 104 DLYELQASKW--EWKRLKP-KPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHT 180 (390)
Q Consensus 104 ~v~~~d~~~~--~W~~~~~-~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 180 (390)
.++.+|..+. .|+.-.. .. ........+.++.++.+|+-.+.... .....++.+|..+..
T Consensus 132 ~l~AlDa~TG~~~W~~~~~~~~-----~~~~~~~~sP~v~~g~v~vg~~~~~~-----------~~~g~v~a~D~~tG~- 194 (689)
T 1yiq_A 132 RLEAIDAKTGQRAWSVDTRADH-----KRSYTITGAPRVVNGKVVIGNGGAEF-----------GVRGYVTAYDAETGK- 194 (689)
T ss_dssp EEEEEETTTCCEEEEEECCSCT-----TSCCBCCSCCEEETTEEEECCBCTTT-----------CCBCEEEEEETTTCC-
T ss_pred EEEEEECCCCCEeeeecCcCCC-----CCCccccCCcEEECCEEEEEeCCCcc-----------CCCCEEEEEECCCCc-
Confidence 4888998765 5876432 10 00112222335568888773222111 223458889988764
Q ss_pred eeeec
Q psy1098 181 TVWDM 185 (390)
Q Consensus 181 ~~W~~ 185 (390)
..|+.
T Consensus 195 ~~W~~ 199 (689)
T 1yiq_A 195 EAWRF 199 (689)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 46875
No 224
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=68.24 E-value=57 Score=27.95 Aligned_cols=25 Identities=12% Similarity=0.355 Sum_probs=16.3
Q ss_pred cEEEEEcCCCCCccCcEEEEecCCC-eEee
Q psy1098 211 TKLIIYGGMSGNRLSDLFMLDINSM-TWQK 239 (390)
Q Consensus 211 ~~i~v~GG~~~~~~~~v~~~d~~~~-~W~~ 239 (390)
+.+++.|+.+ ..+.++|+.+. .|..
T Consensus 117 g~~lasgs~D----~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 117 GLILACGSSD----GAISLLTYTGEGQWEV 142 (316)
T ss_dssp CSCEEEECSS----SCEEEEEECSSSCEEE
T ss_pred CcEEEEEcCC----CCEEEEecCCCCCcce
Confidence 5677777765 35777777654 4643
No 225
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=68.01 E-value=97 Score=30.53 Aligned_cols=163 Identities=9% Similarity=-0.000 Sum_probs=80.2
Q ss_pred EEEEEccCCCCcccceEEEECCCC--c-EEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCc--c
Q psy1098 39 LMLVFGGGNEGIVEELHVFNTATN--Q-WFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASK--W 113 (390)
Q Consensus 39 ~iyv~GG~~~~~~~~~~~~d~~~~--~-W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~--~ 113 (390)
.|++.........+.++++|..+. . |..+... .... ...+...++.||+..... .....++.+|..+ .
T Consensus 281 ~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~---~~~~-~~~~~~dg~~l~~~s~~~---~~~~~l~~~d~~~~~~ 353 (741)
T 1yr2_A 281 WVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD---LKAQ-WDFVDGVGDQLWFVSGDG---APLKKIVRVDLSGSTP 353 (741)
T ss_dssp EEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS---SSSC-EEEEEEETTEEEEEECTT---CTTCEEEEEECSSSSC
T ss_pred EEEEEEEccCCCcceEEEEECCCCCCcccEEecCC---CCce-EEEEeccCCEEEEEECCC---CCCCEEEEEeCCCCcc
Confidence 344444333224578999998776 6 7777621 1111 222335677777764331 1124588999887 5
Q ss_pred eeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCC
Q psy1098 114 EWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLP 193 (390)
Q Consensus 114 ~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p 193 (390)
.|..+.+.. ...-..+...++.+++....+. ...++.++... ..-..+. .|
T Consensus 354 ~~~~l~~~~--------~~~l~~~~~~~~~lv~~~~~dg--------------~~~l~~~~~~g---~~~~~l~----~~ 404 (741)
T 1yr2_A 354 RFDTVVPES--------KDNLESVGIAGNRLFASYIHDA--------------KSQVLAFDLDG---KPAGAVS----LP 404 (741)
T ss_dssp EEEEEECCC--------SSEEEEEEEEBTEEEEEEEETT--------------EEEEEEEETTS---CEEEECB----CS
T ss_pred ccEEEecCC--------CCeEEEEEEECCEEEEEEEECC--------------EEEEEEEeCCC---Cceeecc----CC
Confidence 788876421 1111122333677776654432 23477777643 2222221 12
Q ss_pred CCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecc
Q psy1098 194 SPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQ 241 (390)
Q Consensus 194 ~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~ 241 (390)
....-......+ ....+++.. .+...-..++.||+.+.+.+.+.
T Consensus 405 ~~~~v~~~~~s~---d~~~l~~~~-ss~~~P~~i~~~d~~tg~~~~l~ 448 (741)
T 1yr2_A 405 GIGSASGLSGRP---GDRHAYLSF-SSFTQPATVLALDPATAKTTPWE 448 (741)
T ss_dssp SSCEEEEEECCB---TCSCEEEEE-EETTEEEEEEEEETTTTEEEECS
T ss_pred CCeEEEEeecCC---CCCEEEEEE-cCCCCCCEEEEEECCCCcEEEEe
Confidence 111111111111 123333332 11122357899999888766643
No 226
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=66.77 E-value=52 Score=26.98 Aligned_cols=96 Identities=13% Similarity=0.282 Sum_probs=48.6
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeE---eecccCCCCCCC-CceeeEEE--ECCEEEEEcCcccCCCcccccccccc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTW---QKPQILGPQPLP-RSLHTACV--IGDRMFIFGGWVPILKDESRSLHEKE 283 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W---~~~~~~~~~p~~-r~~~~~~~--~~~~i~i~GG~~~~~~~~~~~~~~~~ 283 (390)
++++|+|-| +..|+|+-.+..- ..+...+ .|.. ..--++.. .++++|+|-|
T Consensus 87 ~~k~yfFkG------~~yW~y~~~~~~~gyPk~I~~~g-~p~~~~~IDAAf~~~~~g~~YfFkG---------------- 143 (218)
T 1gen_A 87 EEKAVFFAG------NEYWIYSASTLERGYPKPLTSLG-LPPDVQRVDAAFNWSKNKKTYIFAG---------------- 143 (218)
T ss_dssp TTEEEEEET------TEEEEEETTEECTTCSEEGGGGT-CCTTCCCCSEEEEETTTTEEEEEET----------------
T ss_pred CCEEEEEeC------CEEEEEcCccccCCCCccHhhcC-CCCCcCCccEEEEEcCCCeEEEEEC----------------
Confidence 689999987 5789998431100 0011111 1211 11223333 2689999977
Q ss_pred ceecCceEEeecCCCeeeeccccc---ccCCCCCCCCCcceeeeC--CEEEEEecc
Q psy1098 284 WKCSNQLACLHLPEMTWEDLSVEV---TDDFLPKPRAGHCASVIN--SRMYIWSGR 334 (390)
Q Consensus 284 ~~~~~~~~~~d~~~~~W~~v~~~~---~~~~~p~~r~~~~~~~~~--~~l~v~GG~ 334 (390)
+..|+||..+.+-..--+.. ....+| ..-.++.... +++|+|-|.
T Consensus 144 ----~~ywr~d~~~~~v~~gyPr~i~~~w~g~p--~~idaAf~~~~~g~~YfFkg~ 193 (218)
T 1gen_A 144 ----DKFWRYNEVKKKMDPGFPKLIADAWNAIP--DNLDAVVDLQGGGHSYFFKGA 193 (218)
T ss_dssp ----TEEEEEETTTTEECSSCCEEHHHHSSSCC--SSCSEEEECTTTCEEEEEETT
T ss_pred ----CEEEEEECccccccCCCCcchhhccCCCC--CCCCEEEEEcCCCcEEEEECC
Confidence 36788988766432210000 011122 2223444443 889999775
No 227
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=65.83 E-value=1.1e+02 Score=30.20 Aligned_cols=94 Identities=4% Similarity=-0.020 Sum_probs=47.4
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE--CCEEEEEcCcccCCCccccccccccceec
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI--GDRMFIFGGWVPILKDESRSLHEKEWKCS 287 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~ 287 (390)
++.||+..-. ....|+++++....-+.+. ...+..| .++++- +++||+.-.. .
T Consensus 507 ~g~ly~td~~---~~~~I~~~~~dG~~~~~l~-~~~l~~P---nGlavd~~~~~LY~aD~~------------------~ 561 (699)
T 1n7d_A 507 HGFMYWTDWG---TPAKIKKGGLNGVDIYSLV-TENIQWP---NGITLDLLSGRLYWVDSK------------------L 561 (699)
T ss_dssp SSCCEECCCS---SSCCEEBCCSSSCCCCEES-CSSCSSC---CCEEECTTTCCEEEEETT------------------T
T ss_pred CCcEEEcccC---CCCeEEEEeCCCCCeeEEE-eCCCCCc---cEEEEeccCCEEEEEecC------------------C
Confidence 5677776421 1146777777643322221 1112112 123332 5788887532 4
Q ss_pred CceEEeecCCCeeeecccccccCCCCCCCCCcceeeeCCEEEEEec
Q psy1098 288 NQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVINSRMYIWSG 333 (390)
Q Consensus 288 ~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG 333 (390)
..|+++++....-+.+... ........++++.++.||+.-.
T Consensus 562 ~~I~~~d~dG~~~~~~~~~-----~~~~~~P~glavd~~~lywtd~ 602 (699)
T 1n7d_A 562 HSISSIDVNGGNRKTILED-----EKRLAHPFSLAVFEDKVFWTDI 602 (699)
T ss_dssp TEEEEECSSSSCCEEECCC-----SSSCSSCCCCEEETTEEEEECS
T ss_pred CeEEEEccCCCceEEEEec-----CCcCCCceEeEEECCEEEEEeC
Confidence 6788888876443333221 1112223456666788888763
No 228
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=65.27 E-value=69 Score=30.31 Aligned_cols=59 Identities=8% Similarity=0.038 Sum_probs=33.1
Q ss_pred eEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcceeEEecC
Q psy1098 54 LHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKP 120 (390)
Q Consensus 54 ~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~ 120 (390)
+.+||..+.+...+... +. ...+....+ +.+++++..... ...++.+|..+.+...+..
T Consensus 134 ~~l~d~~~g~~~~l~~~---~~--~~~~~spDG-~~la~~~~~~~~--~~~i~~~d~~~g~~~~l~~ 192 (582)
T 3o4h_A 134 VALYALDGGGLRELARL---PG--FGFVSDIRG-DLIAGLGFFGGG--RVSLFTSNLSSGGLRVFDS 192 (582)
T ss_dssp EEEEEEETTEEEEEEEE---SS--CEEEEEEET-TEEEEEEEEETT--EEEEEEEETTTCCCEEECC
T ss_pred ceEEEccCCcEEEeecC---CC--ceEEECCCC-CEEEEEEEcCCC--CeEEEEEcCCCCCceEeec
Confidence 34778888777666532 22 233333344 444444443222 1349999998888777643
No 229
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=64.44 E-value=65 Score=27.23 Aligned_cols=98 Identities=8% Similarity=0.049 Sum_probs=51.0
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE---CCEEEEEcCcccCCCcccccccccccee
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI---GDRMFIFGGWVPILKDESRSLHEKEWKC 286 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~---~~~i~i~GG~~~~~~~~~~~~~~~~~~~ 286 (390)
+++.++.|+.+ ..+.+||+.+.....+..... ....-.+++.. ++.+++.|+.
T Consensus 20 ~g~~las~s~D----~~v~iw~~~~~~~~~~~~l~g--H~~~V~~v~~s~~~~g~~l~s~s~------------------ 75 (297)
T 2pm7_B 20 YGKRMATCSSD----KTIKIFEVEGETHKLIDTLTG--HEGPVWRVDWAHPKFGTILASCSY------------------ 75 (297)
T ss_dssp TSSEEEEEETT----SCEEEEEBCSSCBCCCEEECC--CSSCEEEEEECCGGGCSEEEEEET------------------
T ss_pred CCCEEEEEeCC----CEEEEEecCCCCcEEEEEEcc--ccCCeEEEEecCCCcCCEEEEEcC------------------
Confidence 67778888776 457788876543332211111 11111122221 2567777775
Q ss_pred cCceEEeecCCCeeeecccccccCCCCCCCCCcceeee--C--CEEEEEeccCCc
Q psy1098 287 SNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVI--N--SRMYIWSGRDDY 337 (390)
Q Consensus 287 ~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~--~--~~l~v~GG~~~~ 337 (390)
-..+.++|+++.+|..+.. +......-.++.+ + +.+++.|+.++.
T Consensus 76 D~~v~iWd~~~~~~~~~~~------~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~ 124 (297)
T 2pm7_B 76 DGKVMIWKEENGRWSQIAV------HAVHSASVNSVQWAPHEYGPMLLVASSDGK 124 (297)
T ss_dssp TTEEEEEEBSSSCBCCCEE------ECCCSSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred CCEEEEEEcCCCceEEEEE------eecCCCceeEEEeCcCCCCcEEEEEECCCc
Confidence 2467888988887766543 2111111222322 1 567777777643
No 230
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=64.27 E-value=65 Score=27.21 Aligned_cols=13 Identities=15% Similarity=0.212 Sum_probs=9.0
Q ss_pred CCEEEEEeccCCc
Q psy1098 325 NSRMYIWSGRDDY 337 (390)
Q Consensus 325 ~~~l~v~GG~~~~ 337 (390)
++++++.||.++.
T Consensus 317 ~~~~l~s~~~dg~ 329 (351)
T 3f3f_A 317 TGTILSSAGDDGK 329 (351)
T ss_dssp SSCCEEEEETTSC
T ss_pred CCCEEEEecCCCc
Confidence 4677777877653
No 231
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=64.17 E-value=71 Score=27.61 Aligned_cols=23 Identities=13% Similarity=0.082 Sum_probs=18.0
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCe
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMT 236 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~ 236 (390)
++.+++.|+.+ ..|.+||+.+.+
T Consensus 181 dg~~lasg~~d----g~i~iwd~~~~~ 203 (343)
T 3lrv_A 181 DSLLLALYSPD----GILDVYNLSSPD 203 (343)
T ss_dssp TSCEEEEECTT----SCEEEEESSCTT
T ss_pred CCCEEEEEcCC----CEEEEEECCCCC
Confidence 77888888876 468899988764
No 232
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=63.52 E-value=1.2e+02 Score=30.11 Aligned_cols=19 Identities=5% Similarity=0.228 Sum_probs=15.3
Q ss_pred cCceEEeecCCCeeeeccc
Q psy1098 287 SNQLACLHLPEMTWEDLSV 305 (390)
Q Consensus 287 ~~~~~~~d~~~~~W~~v~~ 305 (390)
...+++.+-...+|+++.+
T Consensus 274 ~g~v~rS~D~G~tW~~~~~ 292 (763)
T 3a0f_A 274 YGEVWSYDPTNGNWKHITP 292 (763)
T ss_dssp CEEEEEEETTTTEEEECCT
T ss_pred ceeEEEEeCCCCceEECCC
Confidence 3578888888899999875
No 233
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=63.09 E-value=75 Score=27.49 Aligned_cols=20 Identities=40% Similarity=0.561 Sum_probs=14.7
Q ss_pred CcEEEEEcCCCCCccCcEEEEecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDIN 233 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~ 233 (390)
+++.++.|+.+ ..+.+||+.
T Consensus 224 ~g~~l~sgs~d----g~v~iwd~~ 243 (343)
T 2xzm_R 224 NGKYIATGGKD----KKLLIWDIL 243 (343)
T ss_dssp TSSEEEEEETT----CEEEEEESS
T ss_pred CCCEEEEEcCC----CeEEEEECC
Confidence 67778888876 357788874
No 234
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=63.07 E-value=1.2e+02 Score=29.70 Aligned_cols=149 Identities=8% Similarity=0.022 Sum_probs=75.5
Q ss_pred ccceEEEECCCC--cEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcc---eeEEecCCCCCC
Q psy1098 51 VEELHVFNTATN--QWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKW---EWKRLKPKPPRF 125 (390)
Q Consensus 51 ~~~~~~~d~~~~--~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~---~W~~~~~~~~~~ 125 (390)
.+.++.+|..+. .+..+.. +.......+...++.||+...... ....++.+|..+. .|+.+.+..
T Consensus 258 ~~~i~~~d~~~~~~~~~~l~~----~~~~~~~~~~~~g~~l~~~t~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~--- 327 (693)
T 3iuj_A 258 GNRLYVKDLSQENAPLLTVQG----DLDADVSLVDNKGSTLYLLTNRDA---PNRRLVTVDAANPGPAHWRDLIPER--- 327 (693)
T ss_dssp CCEEEEEETTSTTCCCEEEEC----SSSSCEEEEEEETTEEEEEECTTC---TTCEEEEEETTSCCGGGCEEEECCC---
T ss_pred CcEEEEEECCCCCCceEEEeC----CCCceEEEEeccCCEEEEEECCCC---CCCEEEEEeCCCCCccccEEEecCC---
Confidence 468899998665 6777652 122222224456788988765421 2246888887653 488776532
Q ss_pred CCCCCCCccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEee
Q psy1098 126 GSPPCPRLGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWT 205 (390)
Q Consensus 126 ~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~ 205 (390)
.... .....++.|++..-.+. ...++.+++.. .....+. +|...... ....
T Consensus 328 -----~~~~-~~s~~g~~lv~~~~~~g--------------~~~l~~~d~~g---~~~~~l~----~p~~~~~~-~~~~- 378 (693)
T 3iuj_A 328 -----QQVL-TVHSGSGYLFAEYMVDA--------------TARVEQFDYEG---KRVREVA----LPGLGSVS-GFNG- 378 (693)
T ss_dssp -----SSCE-EEEEETTEEEEEEEETT--------------EEEEEEECTTS---CEEEEEC----CSSSSEEE-ECCC-
T ss_pred -----CCEE-EEEEECCEEEEEEEECC--------------eeEEEEEECCC---CeeEEee----cCCCceEE-eeec-
Confidence 1111 44444666665432221 23477777764 2233321 22211111 1111
Q ss_pred ccCCCcEEEEE-cCCCCCccCcEEEEecCCCeEeecc
Q psy1098 206 DEYKNTKLIIY-GGMSGNRLSDLFMLDINSMTWQKPQ 241 (390)
Q Consensus 206 ~~~~~~~i~v~-GG~~~~~~~~v~~~d~~~~~W~~~~ 241 (390)
....+.+++. .+. ..-..++.||+.+.+.+.+.
T Consensus 379 -~~d~~~l~~~~ss~--~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 379 -KHDDPALYFGFENY--AQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp -CTTCSCEEEEEECS--SSCCEEEEECTTTCCEEEEE
T ss_pred -CCCCCEEEEEecCC--CCCCEEEEEECCCCeEEEEE
Confidence 0113344433 222 12357899999888776654
No 235
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=62.74 E-value=63 Score=26.53 Aligned_cols=61 Identities=11% Similarity=0.219 Sum_probs=34.0
Q ss_pred eCCEEEEEccCCCCcccceEEEECCCCcEEeeeecC---CCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCc
Q psy1098 36 IKDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKG---DIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASK 112 (390)
Q Consensus 36 ~~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~ 112 (390)
.++++|+|=| +.+|+++............. .+|. .-..+.. .++++|+|=|. .+|+|+..+
T Consensus 27 ~~g~~yfFkg------~~~Wr~~~~~~~~~p~~Is~~wpgLP~-~IDAA~~-~~~~~yfFkG~--------~yw~~~~~~ 90 (219)
T 1hxn_A 27 NHGATYVFSG------SHYWRLDTNRDGWHSWPIAHQWPQGPS-TVDAAFS-WEDKLYLIQDT--------KVYVFLTKG 90 (219)
T ss_dssp TTSCEEEEET------TEEEESSSSSCTTCCEEGGGTCTTSCS-SCSEEEE-ETTEEEEEETT--------EEEEEECSS
T ss_pred CCCcEEEEeC------CEEEEEcCCCCCCCceEhhhhccCCCC-CccEEEE-ECCcEEEecCC--------EEEEEeCCC
Confidence 4788999988 55566654332221111111 2232 2233333 38899999663 388898653
No 236
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=62.39 E-value=82 Score=27.71 Aligned_cols=24 Identities=4% Similarity=0.290 Sum_probs=19.1
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeE
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTW 237 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W 237 (390)
++++++.|+.+ ..|.+||+.+.+-
T Consensus 280 dg~~lasgs~D----~~V~iwd~~~~~~ 303 (365)
T 4h5i_A 280 KGELAVLASND----NSIALVKLKDLSM 303 (365)
T ss_dssp TSCEEEEEETT----SCEEEEETTTTEE
T ss_pred CCCceEEEcCC----CEEEEEECCCCcE
Confidence 78888898876 4688999988653
No 237
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=62.10 E-value=73 Score=27.06 Aligned_cols=75 Identities=5% Similarity=0.002 Sum_probs=36.1
Q ss_pred CcEEEEEcCCCCC-ccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGN-RLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~-~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
+..+|+....... ....|++|++..............+......-++--+++||+..+ +
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~--------------------~ 258 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSG--------------------T 258 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCS--------------------S
T ss_pred CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecC--------------------C
Confidence 3457776532110 125689998876543221111111111111112222566776542 3
Q ss_pred ceEEeecCCCeeeecc
Q psy1098 289 QLACLHLPEMTWEDLS 304 (390)
Q Consensus 289 ~~~~~d~~~~~W~~v~ 304 (390)
.|.+||++......+.
T Consensus 259 gv~~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 259 GVCVFDSDGQLLGHIP 274 (305)
T ss_dssp EEEEECTTSCEEEEEE
T ss_pred cEEEECCCCCEEEEEE
Confidence 5889999777665554
No 238
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=61.81 E-value=74 Score=30.89 Aligned_cols=53 Identities=15% Similarity=0.334 Sum_probs=30.3
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeec--ccC--CCCCCCCceeeEEEEC--CEEEEEcCc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKP--QIL--GPQPLPRSLHTACVIG--DRMFIFGGW 268 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~--~~~--~~~p~~r~~~~~~~~~--~~i~i~GG~ 268 (390)
++++|+|-| +..|+||..+.+-..- ... .-+..+..-.++.... +++|+|-|.
T Consensus 548 ~gktYFFkG------~~ywryd~~~~~vd~gYPk~i~~~w~G~p~~iDAAf~~~~~g~~YFFkG~ 606 (631)
T 1ck7_A 548 NKKTYIFAG------DKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGA 606 (631)
T ss_dssp TCEEEEEET------TEEEEEETTTTEECTTCCEETTTSCSSCCTTCCEEECCTTSCBCEEEETT
T ss_pred CCeEEEEEC------CEEEEEcCCcccccCCCCcchHhhcCCCCCCCcEeEEEcCCCeEEEEECC
Confidence 789999987 5799999876543321 000 1112222223444433 788988773
No 239
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=59.10 E-value=88 Score=27.01 Aligned_cols=24 Identities=17% Similarity=0.141 Sum_probs=17.4
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeE
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTW 237 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W 237 (390)
++.+++.|+.+ ..+.+||+.+.+.
T Consensus 87 ~~~~l~s~s~D----~~v~lwd~~~~~~ 110 (343)
T 2xzm_R 87 ENCFAISSSWD----KTLRLWDLRTGTT 110 (343)
T ss_dssp STTEEEEEETT----SEEEEEETTSSCE
T ss_pred CCCEEEEEcCC----CcEEEEECCCCcE
Confidence 56677788766 4688889887654
No 240
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=58.40 E-value=1e+02 Score=27.53 Aligned_cols=23 Identities=13% Similarity=0.179 Sum_probs=16.5
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCe
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMT 236 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~ 236 (390)
++.+++.|+.+ ..+.+||+.+.+
T Consensus 272 ~~~~l~s~~~d----g~i~iwd~~~~~ 294 (437)
T 3gre_A 272 NSVIVVGGSSK----TFLTIWNFVKGH 294 (437)
T ss_dssp TEEEEEEESTT----EEEEEEETTTTE
T ss_pred CccEEEEEcCC----CcEEEEEcCCCc
Confidence 56677777765 358888887665
No 241
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=57.45 E-value=1.4e+02 Score=28.65 Aligned_cols=70 Identities=20% Similarity=0.310 Sum_probs=42.5
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCe--EeecccCCCCCCC---CceeeEEEECCEEEEEcCcccCCCccccccccccc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMT--WQKPQILGPQPLP---RSLHTACVIGDRMFIFGGWVPILKDESRSLHEKEW 284 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~--W~~~~~~~~~p~~---r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~ 284 (390)
+++||+.... +.++.+|..+.+ |+.-........+ ....+.++.+++||+...
T Consensus 68 ~g~vyv~~~~-----~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~----------------- 125 (582)
T 1flg_A 68 DGVIYVTASY-----SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL----------------- 125 (582)
T ss_dssp TTEEEEEETT-----TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-----------------
T ss_pred CCEEEEEcCC-----CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC-----------------
Confidence 8999988764 238899987654 8873211110001 112334567888887532
Q ss_pred eecCceEEeecCCCe--eeec
Q psy1098 285 KCSNQLACLHLPEMT--WEDL 303 (390)
Q Consensus 285 ~~~~~~~~~d~~~~~--W~~v 303 (390)
...++.+|.++.+ |+.-
T Consensus 126 --dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 126 --DASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp --TTEEEEEESSSCCEEEEEE
T ss_pred --CCEEEEEECCCCCEEeeec
Confidence 3578999987764 8753
No 242
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=57.19 E-value=1.1e+02 Score=27.40 Aligned_cols=96 Identities=9% Similarity=0.073 Sum_probs=47.7
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCe--Ee-ecccCCCCCCC-CceeeEEEE--CCEEEEEcCcccCCCcccccccccc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMT--WQ-KPQILGPQPLP-RSLHTACVI--GDRMFIFGGWVPILKDESRSLHEKE 283 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~--W~-~~~~~~~~p~~-r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~ 283 (390)
++++|+|-| +..|+|+..... +- .+... ..|.. ..--++... ++++|+|-|
T Consensus 236 ~g~~~fFkg------~~yWr~~~~~~~~gyPk~I~~~-GlP~~~~~IDAA~~~~~~~~~yfFkG---------------- 292 (365)
T 3ba0_A 236 RNQVFLFKD------DKYWLISNLRPEPNYPKSIHSF-GFPNFVKKIDAAVFNPRFYRTYFFVD---------------- 292 (365)
T ss_dssp GTEEEEEET------TEEEECSTTSCTTTCSEETTTT-TCCTTCCCCCEEEEETTTTEEEEEET----------------
T ss_pred CCEEEEEeC------CEEEEEcCCcccCCCCceeeec-cCCCCCCCcCEEEEeCCCCEEEEEEC----------------
Confidence 789999977 567888654211 11 11111 12321 112233333 479999977
Q ss_pred ceecCceEEeecCCCeeeecccccc---cCCCCCCCCCcceeee-CCEEEEEecc
Q psy1098 284 WKCSNQLACLHLPEMTWEDLSVEVT---DDFLPKPRAGHCASVI-NSRMYIWSGR 334 (390)
Q Consensus 284 ~~~~~~~~~~d~~~~~W~~v~~~~~---~~~~p~~r~~~~~~~~-~~~l~v~GG~ 334 (390)
+..|+||..+.+-..--+... ...+|. .-.++... ++++|.|=|.
T Consensus 293 ----~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~--~iDaA~~~~~g~~YfFkg~ 341 (365)
T 3ba0_A 293 ----NQYWRYDERRQMMDPGYPKLITKNFQGIGP--KIDAVFYSKNKYYYFFQGS 341 (365)
T ss_dssp ----TEEEEEETTTTEECSSCCCCHHHHSTTCCS--SCSEEEEETTTEEEEEETT
T ss_pred ----CEEEEEeCCcceecCCCCcchhhcCCCCCC--ccceeeEecCCcEEEEeCC
Confidence 477889876654221000000 011221 12233334 7889998774
No 243
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=56.68 E-value=1.6e+02 Score=29.35 Aligned_cols=96 Identities=15% Similarity=0.177 Sum_probs=47.6
Q ss_pred ceeEEecCCCCCCCCCCCceeeeEEe---CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCC-----CCCceeeE
Q psy1098 11 VYRWRRIDDPAGPQPRPRHGHRAVAI---KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIP-----PGCAAYGI 82 (390)
Q Consensus 11 ~~~W~~~~~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p-----~~r~~~~~ 82 (390)
..+|+.+. .....| -.++++. .+.+|+ |+.. ..+++-+-...+|+.+. ..+ ..+.-+++
T Consensus 3 ~~~W~~~~----~~~~g~-i~~i~~~p~~~~~~~a-~~~~----ggv~rS~DgG~tW~~~~---~~~~~~~~~~~~i~~i 69 (789)
T 1sqj_A 3 HYEFKNVA----IGGGGY-ITGIVAHPKTKDLLYA-RTDI----GGAYRWDAGTSKWIPLN---DFIEAQDMNIMGTESI 69 (789)
T ss_dssp -CEEEECC----CCBCSC-EEEEEECSSSTTCEEE-EESS----SCEEEEETTTTEEEESC---TTCCGGGGGGCSEEEE
T ss_pred cccceEcc----CCCCCc-EEEEEECCCCCCEEEE-EecC----CCEEEecCCCCCeeECc---cCCCcccccCCceeEE
Confidence 35899996 211222 3333332 133554 4322 23666666677899865 212 12334455
Q ss_pred EEeC---CEEEEEcceeCCceeecceEEEEcCcceeEEecC
Q psy1098 83 VVDN---TRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKP 120 (390)
Q Consensus 83 ~~~~---~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~ 120 (390)
++.. +.+|+..|....... ..|++=+-.-.+|+++..
T Consensus 70 a~dp~~~~~i~~~~g~~~~~~~-~~v~~S~DgG~TW~~~~~ 109 (789)
T 1sqj_A 70 ALDPNNPDRLYLAQGRYVGDEW-AAFYVSEDRGQSFTIYES 109 (789)
T ss_dssp EEETTEEEEEEEEECSCTTSSC-CEEEEESSTTSEEEEEEC
T ss_pred EECCCCCCEEEEEeCccCCCcc-cEEEEECCCCCcceeccC
Confidence 5432 467776654211111 335554445668998864
No 244
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=55.81 E-value=1.3e+02 Score=28.24 Aligned_cols=71 Identities=17% Similarity=0.078 Sum_probs=38.4
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
+++.++++..+......++++|+.+.+.+.+.. .+ ......+.. +++.++.+...+ ..
T Consensus 160 DG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~---~~--~~~~~~~~SpDG~~l~~~~~~~----------------~~ 218 (582)
T 3o4h_A 160 RGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDS---GE--GSFSSASISPGMKVTAGLETAR----------------EA 218 (582)
T ss_dssp ETTEEEEEEEEETTEEEEEEEETTTCCCEEECC---SS--CEEEEEEECTTSCEEEEEECSS----------------CE
T ss_pred CCCEEEEEEEcCCCCeEEEEEcCCCCCceEeec---CC--CccccceECCCCCEEEEccCCC----------------ee
Confidence 555566554332222459999999888876431 11 111122222 555544322110 24
Q ss_pred ceEEeecCCCeee
Q psy1098 289 QLACLHLPEMTWE 301 (390)
Q Consensus 289 ~~~~~d~~~~~W~ 301 (390)
.++++|+++.+.+
T Consensus 219 ~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 219 RLVTVDPRDGSVE 231 (582)
T ss_dssp EEEEECTTTCCEE
T ss_pred EEEEEcCCCCcEE
Confidence 7889999888766
No 245
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=55.42 E-value=1.5e+02 Score=28.69 Aligned_cols=17 Identities=12% Similarity=0.559 Sum_probs=13.8
Q ss_pred CcEEEEEcCCCCCccCcEEEEec
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDI 232 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~ 232 (390)
++++|+|-| +..|+|+.
T Consensus 500 ~~k~yFFkG------~~yWry~~ 516 (631)
T 1ck7_A 500 EEKAVFFAG------NEYWIYSA 516 (631)
T ss_dssp TTEEEEEET------TEEEEEET
T ss_pred CCEEEEEec------CEEEEECC
Confidence 688999977 56899985
No 246
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=55.13 E-value=1.2e+02 Score=27.33 Aligned_cols=153 Identities=10% Similarity=0.033 Sum_probs=75.6
Q ss_pred CCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCCc
Q psy1098 86 NTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTPS 163 (390)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~ 163 (390)
+++||+.... ...+.++|+.+..-..+... ....+ ++.. ++.+|+.......
T Consensus 141 ~g~lyv~d~~------~~~I~~id~~~g~~~~~~~~---------~~~~~-ia~~~~g~~l~~~d~~~~~---------- 194 (409)
T 3hrp_A 141 NNTVLAYQRD------DPRVRLISVDDNKVTTVHPG---------FKGGK-PAVTKDKQRVYSIGWEGTH---------- 194 (409)
T ss_dssp TTEEEEEETT------TTEEEEEETTTTEEEEEEET---------CCBCB-CEECTTSSEEEEEBSSTTC----------
T ss_pred CCCEEEEecC------CCcEEEEECCCCEEEEeecc---------CCCCc-eeEecCCCcEEEEecCCCc----------
Confidence 5678887542 14588899887765554431 11122 2222 3466665432211
Q ss_pred cccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccC
Q psy1098 164 YKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQIL 243 (390)
Q Consensus 164 ~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~ 243 (390)
.++.++..... ....+..... +....-+.++..+. ++.||+... . ..+++||+.+...+.+...
T Consensus 195 -----~I~~~d~~~~~--~~~~~g~~~~-~~~~~p~~iav~p~---~g~lyv~d~-~----~~I~~~d~~~~~~~~~~~~ 258 (409)
T 3hrp_A 195 -----TVYVYMKASGW--APTRIGQLGS-TFSGKIGAVALDET---EEWLYFVDS-N----KNFGRFNVKTQEVTLIKQL 258 (409)
T ss_dssp -----EEEEEEGGGTT--CEEEEEECCT-TSCSCCCBCEECTT---SSEEEEECT-T----CEEEEEETTTCCEEEEEEC
T ss_pred -----eEEEEEcCCCc--eeEEeeeccc-hhcCCcEEEEEeCC---CCeEEEEEC-C----CcEEEEECCCCCEEEEecc
Confidence 47788776421 1112100000 01112234444432 688898432 1 4699999987765443111
Q ss_pred CCCCCCCce-e-eEEEE--CCEEEEEcCcccCCCccccccccccceecCceEEeecCCC
Q psy1098 244 GPQPLPRSL-H-TACVI--GDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEM 298 (390)
Q Consensus 244 ~~~p~~r~~-~-~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 298 (390)
......... . .+++. ++.||+.... ...|++|++...
T Consensus 259 ~~~g~~~~~P~~~ia~~p~~g~lyv~d~~------------------~~~I~~~~~~g~ 299 (409)
T 3hrp_A 259 ELSGSLGTNPGPYLIYYFVDSNFYMSDQN------------------LSSVYKITPDGE 299 (409)
T ss_dssp CCCSCCCCSSCCEEEEETTTTEEEEEETT------------------TTEEEEECTTCC
T ss_pred cccCCCCCCccccEEEeCCCCEEEEEeCC------------------CCEEEEEecCCC
Confidence 111111122 1 44444 5789887532 357888887654
No 247
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=50.64 E-value=1.3e+02 Score=26.48 Aligned_cols=149 Identities=15% Similarity=0.211 Sum_probs=73.4
Q ss_pred CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCC
Q psy1098 141 GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMS 220 (390)
Q Consensus 141 ~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~ 220 (390)
++.+||.+-..- ..+++++........|..- ......+.+....++.+ .+..+++..+ .
T Consensus 147 ~GnaYVt~s~~~---------------~~I~rV~pdG~~~~~~~~~---~~~~~~~~G~nGIv~~p--dg~~Liv~~~-~ 205 (334)
T 2p9w_A 147 DGNSYVAFALGM---------------PAIARVSADGKTVSTFAWE---SGNGGQRPGYSGITFDP--HSNKLIAFGG-P 205 (334)
T ss_dssp TSCEEEEEEESS---------------CEEEEECTTSCCEEEEEEC---CCCSSSCCSCSEEEEET--TTTEEEEESS-S
T ss_pred CCCEEEeCCCCC---------------CeEEEEeCCCCEEeeeeec---CCCcccccCcceEEEeC--CCCEEEEEcC-C
Confidence 579999755430 2488888875433446541 11223344444444421 1456666665 3
Q ss_pred CCccCcEEEEecCCCeEeecccC--CCC-CCCCcee-eEEEECCEEEEEcCcccCCCccccccccccceecCceEEeecC
Q psy1098 221 GNRLSDLFMLDINSMTWQKPQIL--GPQ-PLPRSLH-TACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLP 296 (390)
Q Consensus 221 ~~~~~~v~~~d~~~~~W~~~~~~--~~~-p~~r~~~-~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 296 (390)
..+++||+.+.....+... +.. ....... .....+++++++.-. .+..+.+-..
T Consensus 206 ----g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~------------------~~~~~~l~S~ 263 (334)
T 2p9w_A 206 ----RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGAR------------------APYAISFRSW 263 (334)
T ss_dssp ----SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEE------------------TTEEEEEECS
T ss_pred ----CeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcC------------------CCCEEEEECC
Confidence 5689999884322111111 111 1111111 122358888666432 2333444334
Q ss_pred CCeeeecccccccCCCCCC--CCCccee-e----eCCEEEEEeccCC
Q psy1098 297 EMTWEDLSVEVTDDFLPKP--RAGHCAS-V----INSRMYIWSGRDD 336 (390)
Q Consensus 297 ~~~W~~v~~~~~~~~~p~~--r~~~~~~-~----~~~~l~v~GG~~~ 336 (390)
.+ |+....... .|.. -.+.+.+ . .+++||++-++..
T Consensus 264 Dg-W~sa~~~g~---~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~f~ 306 (334)
T 2p9w_A 264 DN-WKSANIKKT---KRSELQNSGFTAVADYYQGSEQGLYAVSAFFD 306 (334)
T ss_dssp ST-TSEEEEEEE---ECGGGGSSCEEEEEEEEETTEEEEEEEECCGG
T ss_pred CC-cceeEEeee---ecCccccCceeEEEEeccccCCeEEEEeeecC
Confidence 44 877654322 2221 2234333 3 4689999998753
No 248
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=50.34 E-value=1.2e+02 Score=25.82 Aligned_cols=83 Identities=16% Similarity=0.110 Sum_probs=43.0
Q ss_pred CCCCCceeeeEEe-CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEe-CCEEEEEcceeCCcee
Q psy1098 24 QPRPRHGHRAVAI-KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVD-NTRVLIFGGMVEYGKY 101 (390)
Q Consensus 24 ~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~ 101 (390)
.|.....+..+.- ++.||+.--. ...++.+|+.... ..... .+ ..-+.++.. ++++|+...... .
T Consensus 28 ~p~~~~pegia~~~~g~lyv~d~~----~~~I~~~d~~g~~-~~~~~---~~--~~p~gia~~~dG~l~vad~~~~-~-- 94 (306)
T 2p4o_A 28 FPVNTFLENLASAPDGTIFVTNHE----VGEIVSITPDGNQ-QIHAT---VE--GKVSGLAFTSNGDLVATGWNAD-S-- 94 (306)
T ss_dssp ECTTCCEEEEEECTTSCEEEEETT----TTEEEEECTTCCE-EEEEE---CS--SEEEEEEECTTSCEEEEEECTT-S--
T ss_pred CCCCCCcceEEECCCCCEEEEeCC----CCeEEEECCCCce-EEEEe---CC--CCceeEEEcCCCcEEEEeccCC-c--
Confidence 3333344444432 4568887532 2458899987643 22221 11 123344433 457887653210 1
Q ss_pred ecceEEEEcCcceeEEecC
Q psy1098 102 SSDLYELQASKWEWKRLKP 120 (390)
Q Consensus 102 ~~~v~~~d~~~~~W~~~~~ 120 (390)
..++++|+.+.+...+..
T Consensus 95 -~~v~~~d~~~g~~~~~~~ 112 (306)
T 2p4o_A 95 -IPVVSLVKSDGTVETLLT 112 (306)
T ss_dssp -CEEEEEECTTSCEEEEEE
T ss_pred -ceEEEEcCCCCeEEEEEe
Confidence 237788887777666554
No 249
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=49.89 E-value=2e+02 Score=28.27 Aligned_cols=65 Identities=11% Similarity=0.032 Sum_probs=38.1
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccC-CCCCCCCceeeEEEECCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQIL-GPQPLPRSLHTACVIGDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~-~~~p~~r~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
+++||+.-.. ...|+++++....-+.+... ..++ ...++++.++.||+.-.. ..
T Consensus 551 ~~~LY~aD~~----~~~I~~~d~dG~~~~~~~~~~~~~~---~P~glavd~~~lywtd~~------------------~~ 605 (699)
T 1n7d_A 551 SGRLYWVDSK----LHSISSIDVNGGNRKTILEDEKRLA---HPFSLAVFEDKVFWTDII------------------NE 605 (699)
T ss_dssp TCCEEEEETT----TTEEEEECSSSSCCEEECCCSSSCS---SCCCCEEETTEEEEECST------------------TT
T ss_pred CCEEEEEecC----CCeEEEEccCCCceEEEEecCCcCC---CceEeEEECCEEEEEeCC------------------CC
Confidence 6788887643 25788998875433332111 1122 224556677888888632 45
Q ss_pred ceEEeecCCCe
Q psy1098 289 QLACLHLPEMT 299 (390)
Q Consensus 289 ~~~~~d~~~~~ 299 (390)
.|.++|+.+.+
T Consensus 606 ~V~~~d~~~G~ 616 (699)
T 1n7d_A 606 AIFSANRLTGS 616 (699)
T ss_dssp CEEEEETTTEE
T ss_pred eEEEEEccCCC
Confidence 77788776554
No 250
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=49.40 E-value=1.6e+02 Score=27.14 Aligned_cols=94 Identities=9% Similarity=0.170 Sum_probs=47.1
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCe--E-eecc-cCCCCCC-CCceeeEEEE--CCEEEEEcCcccCCCccccccccc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMT--W-QKPQ-ILGPQPL-PRSLHTACVI--GDRMFIFGGWVPILKDESRSLHEK 282 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~--W-~~~~-~~~~~p~-~r~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~ 282 (390)
++++|+|-| +.+|+++..+.. + ..+. ..+ .|. +..--++... ++++|+|-|
T Consensus 318 ~g~~~fFKg------~~~W~~~~~~~~~gyP~~i~~~~g-~P~~~~~IDAA~~~~~~~k~yfFkG--------------- 375 (450)
T 1su3_A 318 RDEVRFFKG------NKYWAVQGQNVLHGYPKDIYSSFG-FPRTVKHIDAALSEENTGKTYFFVA--------------- 375 (450)
T ss_dssp GTEEEEEET------TEEEEEETTEECTTCSEEHHHHHC-CCTTCCCCCEEEEETTTTEEEEEET---------------
T ss_pred CCeEEEEeC------CEEEEecCCcccCCCceeeehhhc-CCCCCCccceEEEEcCCCeEEEEeC---------------
Confidence 689999987 567888643210 0 0011 011 121 1111133333 589999977
Q ss_pred cceecCceEEeecCCCeeee-----cccccccCCCCCCCCCcceeeeCCEEEEEecc
Q psy1098 283 EWKCSNQLACLHLPEMTWED-----LSVEVTDDFLPKPRAGHCASVINSRMYIWSGR 334 (390)
Q Consensus 283 ~~~~~~~~~~~d~~~~~W~~-----v~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~ 334 (390)
+..|+||..+.+-.. +.. ....+|. . -.+++..++++|+|-|.
T Consensus 376 -----~~yw~yd~~~~~~~~gYPk~I~~--~fpgip~-~-iDAA~~~~g~~YFFkg~ 423 (450)
T 1su3_A 376 -----NKYWRYDEYKRSMDPGYPKMIAH--DFPGIGH-K-VDAVFMKDGFFYFFHGT 423 (450)
T ss_dssp -----TEEEEEETTTTEECSSCSEEHHH--HSTTSCS-C-CSEEEEETTEEEEEETT
T ss_pred -----CEEEEEeCCCccccCCCCcchhh--cCCCCCC-C-ccEEEEcCCeEEEEeCC
Confidence 478889876543211 110 0011221 1 22344458899999875
No 251
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=48.99 E-value=1.2e+02 Score=25.72 Aligned_cols=63 Identities=13% Similarity=0.171 Sum_probs=34.0
Q ss_pred cEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecCc
Q psy1098 211 TKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSNQ 289 (390)
Q Consensus 211 ~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~ 289 (390)
+..++.|+.+ ..+.++|+.+.+-.... .+ ....-.+++.. ++++++.||. -..
T Consensus 166 ~~~l~s~~~d----~~i~~wd~~~~~~~~~~-~~---h~~~v~~~~~sp~g~~l~s~~~------------------dg~ 219 (319)
T 3frx_A 166 SVTIISAGND----KMVKAWNLNQFQIEADF-IG---HNSNINTLTASPDGTLIASAGK------------------DGE 219 (319)
T ss_dssp CCEEEEEETT----SCEEEEETTTTEEEEEE-CC---CCSCEEEEEECTTSSEEEEEET------------------TCE
T ss_pred ccEEEEEeCC----CEEEEEECCcchhheee-cC---CCCcEEEEEEcCCCCEEEEEeC------------------CCe
Confidence 3466777665 46888888776543311 11 01111122222 5677777775 246
Q ss_pred eEEeecCCCe
Q psy1098 290 LACLHLPEMT 299 (390)
Q Consensus 290 ~~~~d~~~~~ 299 (390)
+.++|+.+.+
T Consensus 220 i~iwd~~~~~ 229 (319)
T 3frx_A 220 IMLWNLAAKK 229 (319)
T ss_dssp EEEEETTTTE
T ss_pred EEEEECCCCc
Confidence 7777776654
No 252
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=48.20 E-value=1.5e+02 Score=26.58 Aligned_cols=154 Identities=11% Similarity=0.062 Sum_probs=76.1
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCceeecceEEEEcCcce-e
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYGKYSSDLYELQASKWE-W 115 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~-W 115 (390)
++.||+.... ...+.++|+.++.-..+.... ..++ .++...++.||+..... . ..++.++..... .
T Consensus 141 ~g~lyv~d~~----~~~I~~id~~~g~~~~~~~~~--~~~~--ia~~~~g~~l~~~d~~~-~----~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 141 NNTVLAYQRD----DPRVRLISVDDNKVTTVHPGF--KGGK--PAVTKDKQRVYSIGWEG-T----HTVYVYMKASGWAP 207 (409)
T ss_dssp TTEEEEEETT----TTEEEEEETTTTEEEEEEETC--CBCB--CEECTTSSEEEEEBSST-T----CEEEEEEGGGTTCE
T ss_pred CCCEEEEecC----CCcEEEEECCCCEEEEeeccC--CCCc--eeEecCCCcEEEEecCC-C----ceEEEEEcCCCcee
Confidence 5678888652 246889999887776655321 1111 22222344666654321 1 158889887553 2
Q ss_pred EEecCCCCCCCCCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCC
Q psy1098 116 KRLKPKPPRFGSPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLP 193 (390)
Q Consensus 116 ~~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p 193 (390)
..+.... .+....-+.++.. ++.||+... . ..++++|..+............+
T Consensus 208 ~~~g~~~-----~~~~~~p~~iav~p~~g~lyv~d~-~----------------~~I~~~d~~~~~~~~~~~~~~~g--- 262 (409)
T 3hrp_A 208 TRIGQLG-----STFSGKIGAVALDETEEWLYFVDS-N----------------KNFGRFNVKTQEVTLIKQLELSG--- 262 (409)
T ss_dssp EEEEECC-----TTSCSCCCBCEECTTSSEEEEECT-T----------------CEEEEEETTTCCEEEEEECCCCS---
T ss_pred EEeeecc-----chhcCCcEEEEEeCCCCeEEEEEC-C----------------CcEEEEECCCCCEEEEecccccC---
Confidence 2331110 0011112233333 578888322 1 14888888764322221111111
Q ss_pred CCCce-e-eeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCC
Q psy1098 194 SPRES-H-TACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSM 235 (390)
Q Consensus 194 ~~r~~-~-~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~ 235 (390)
..... . .++..+. ++.+|+..... ..|++|++...
T Consensus 263 ~~~~~P~~~ia~~p~---~g~lyv~d~~~----~~I~~~~~~g~ 299 (409)
T 3hrp_A 263 SLGTNPGPYLIYYFV---DSNFYMSDQNL----SSVYKITPDGE 299 (409)
T ss_dssp CCCCSSCCEEEEETT---TTEEEEEETTT----TEEEEECTTCC
T ss_pred CCCCCccccEEEeCC---CCEEEEEeCCC----CEEEEEecCCC
Confidence 11111 1 3444432 58899885432 56889987754
No 253
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=47.48 E-value=1.1e+02 Score=29.85 Aligned_cols=31 Identities=13% Similarity=0.043 Sum_probs=18.1
Q ss_pred CcEEEEEcCCCCCccCcEEEEe----cCCCeEeec
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLD----INSMTWQKP 240 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d----~~~~~W~~~ 240 (390)
++++++...........|+++| +.+.++..+
T Consensus 263 D~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~ 297 (719)
T 1z68_A 263 DERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKT 297 (719)
T ss_dssp SSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGG
T ss_pred CCeEEEEEeccccCeEEEEEEcccCCCCCCceEEE
Confidence 5666665321112234689999 877776654
No 254
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=47.43 E-value=1.5e+02 Score=26.35 Aligned_cols=67 Identities=6% Similarity=-0.000 Sum_probs=41.7
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeeccc----CCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccc
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQI----LGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEW 284 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~----~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~ 284 (390)
++++|+|-| +..|+||..+.+-..-.+ ..-+..+..--++... ++++|+|=|
T Consensus 284 ~~~~yfFkG------~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~~iDaA~~~~~g~~YfFkg----------------- 340 (365)
T 3ba0_A 284 FYRTYFFVD------NQYWRYDERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQG----------------- 340 (365)
T ss_dssp TTEEEEEET------TEEEEEETTTTEECSSCCCCHHHHSTTCCSSCSEEEEETTTEEEEEET-----------------
T ss_pred CCEEEEEEC------CEEEEEeCCcceecCCCCcchhhcCCCCCCccceeeEecCCcEEEEeC-----------------
Confidence 689999987 678999987665332000 0001122223344444 789999976
Q ss_pred eecCceEEeecCCCeeee
Q psy1098 285 KCSNQLACLHLPEMTWED 302 (390)
Q Consensus 285 ~~~~~~~~~d~~~~~W~~ 302 (390)
+..|+||..+.+-..
T Consensus 341 ---~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 341 ---SNQFEYDFLLQRITK 355 (365)
T ss_dssp ---TEEEEEETTTTEEEE
T ss_pred ---CEEEEEECCccEEec
Confidence 378899988877555
No 255
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=45.68 E-value=2e+02 Score=27.26 Aligned_cols=67 Identities=1% Similarity=0.019 Sum_probs=34.1
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
.+..++.++.+ ..+..+|+.+..-.... .+ ....-.+++.. +++.++.|+. -.
T Consensus 293 ~~~~l~s~s~d----~~i~~~~~~~~~~~~~~-~g---h~~~v~~l~~spdg~~l~s~s~------------------D~ 346 (611)
T 1nr0_A 293 TKQALVSISAN----GFINFVNPELGSIDQVR-YG---HNKAITALSSSADGKTLFSADA------------------EG 346 (611)
T ss_dssp CSSCEEEEETT----CCEEEEETTTTEEEEEE-CC---CSSCEEEEEECTTSSEEEEEET------------------TS
T ss_pred cCCEEEEEeCC----CcEEEEeCCCCCcceEE-cC---CCCCEEEEEEeCCCCEEEEEeC------------------CC
Confidence 34455555554 35777887766532211 11 11111122222 5677777765 24
Q ss_pred ceEEeecCCCeeee
Q psy1098 289 QLACLHLPEMTWED 302 (390)
Q Consensus 289 ~~~~~d~~~~~W~~ 302 (390)
.+.++|+.+.+-..
T Consensus 347 ~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 347 HINSWDISTGISNR 360 (611)
T ss_dssp CEEEEETTTCCEEE
T ss_pred cEEEEECCCCceee
Confidence 67778877765433
No 256
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=45.41 E-value=1.5e+02 Score=27.05 Aligned_cols=26 Identities=15% Similarity=0.169 Sum_probs=17.7
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEee
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQK 239 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~ 239 (390)
++.||+.--.. ..|++|++.+..-+.
T Consensus 237 ~g~lyv~d~~~----~~V~~~~~~~~~~~~ 262 (430)
T 3tc9_A 237 NGELYFNSWNA----GQVFRYDFTTQETTP 262 (430)
T ss_dssp TCCEEEEETTT----TEEEEEETTTTEEEE
T ss_pred CCEEEEEECCC----CEEEEEECCCCcEEE
Confidence 57788775322 569999998776533
No 257
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=44.60 E-value=1.5e+02 Score=25.39 Aligned_cols=206 Identities=11% Similarity=0.070 Sum_probs=95.4
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCc--EEeeeecCCC---CC-CCceeeEEEe--CCEEEEEcceeCCceeecceEEE
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQ--WFIPTLKGDI---PP-GCAAYGIVVD--NTRVLIFGGMVEYGKYSSDLYEL 108 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~--W~~~~~~~~~---p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~ 108 (390)
++.+|+....+ ..+..||+.... -..+...+.. .. ...-..+++. ++.||+..+.. ...|.+|
T Consensus 101 ~g~l~v~d~~~----~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~-----~~~I~~~ 171 (329)
T 3fvz_A 101 DGNYWVTDVAL----HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC-----NSRIVQF 171 (329)
T ss_dssp TSCEEEEETTT----TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS-----CCEEEEE
T ss_pred CCCEEEEECCC----CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC-----CCeEEEE
Confidence 45688776532 458888886542 2222111000 01 1122344444 57899987521 1458888
Q ss_pred EcCcceeEEecCCCCCCCCCCCCCc-cceEEEE-C-CEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeec
Q psy1098 109 QASKWEWKRLKPKPPRFGSPPCPRL-GHSFTLI-G-NKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDM 185 (390)
Q Consensus 109 d~~~~~W~~~~~~~~~~~~~p~~r~-~~~~~~~-~-~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~ 185 (390)
|+....-..+..........+.... -+.++.. + +.+|+....+. .+.+|+..+.. .-..
T Consensus 172 ~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~----------------~I~~~~~~~G~--~~~~ 233 (329)
T 3fvz_A 172 SPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG----------------RIQCFKTDTKE--FVRE 233 (329)
T ss_dssp CTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT----------------EEEEEETTTCC--EEEE
T ss_pred cCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC----------------EEEEEECCCCc--EEEE
Confidence 8665433333211000000011111 2233333 4 78998754332 37778876321 1122
Q ss_pred cccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCC---CCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE--CC
Q psy1098 186 PGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMS---GNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI--GD 260 (390)
Q Consensus 186 ~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~---~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~ 260 (390)
+... .....-.+++.. .+.++...|.. +.....+.++|+.+.+....- +..+........+.+ ++
T Consensus 234 ~~~~---~~~~~~~~~~~~-----pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~--~~~~~~~~~p~~ia~~~dG 303 (329)
T 3fvz_A 234 IKHA---SFGRNVFAISYI-----PGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF--KPVRKHFDMPHDIVASEDG 303 (329)
T ss_dssp ECCT---TTTTCEEEEEEE-----TTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE--CCSSSCCSSEEEEEECTTS
T ss_pred Eecc---ccCCCcceeeec-----CCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE--cCCCCccCCeeEEEECCCC
Confidence 1111 111111223333 36667666642 112357899998877655421 111111122223333 56
Q ss_pred EEEEEcCcccCCCccccccccccceecCceEEeecCC
Q psy1098 261 RMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPE 297 (390)
Q Consensus 261 ~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 297 (390)
.|||.... .+.|.+|++..
T Consensus 304 ~lyvad~~------------------~~~I~~~~~~~ 322 (329)
T 3fvz_A 304 TVYIGDAH------------------TNTVWKFTLTE 322 (329)
T ss_dssp EEEEEESS------------------SCCEEEEEEEE
T ss_pred CEEEEECC------------------CCEEEEEeCCc
Confidence 88888653 35777777653
No 258
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=44.42 E-value=1.5e+02 Score=25.29 Aligned_cols=61 Identities=11% Similarity=0.106 Sum_probs=33.8
Q ss_pred cceEEEECCCCcEEeeeecCCC---------------CCCCceeeEEEe--CCEEEEEcceeCCceeecceEEEEcCcce
Q psy1098 52 EELHVFNTATNQWFIPTLKGDI---------------PPGCAAYGIVVD--NTRVLIFGGMVEYGKYSSDLYELQASKWE 114 (390)
Q Consensus 52 ~~~~~~d~~~~~W~~~~~~~~~---------------p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~~~~~ 114 (390)
..++.||+.+..++.+...... +....-+.++.. +++||+.... ..+.++|+.+..
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~-------~~i~~~d~~~g~ 112 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY-------YHLSVVGSEGGH 112 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT-------TEEEEECTTCEE
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC-------CCEEEEeCCCCE
Confidence 4688899887777655421110 000112445554 5788887321 237788887665
Q ss_pred eEEec
Q psy1098 115 WKRLK 119 (390)
Q Consensus 115 W~~~~ 119 (390)
.+.+.
T Consensus 113 ~~~~~ 117 (322)
T 2fp8_A 113 ATQLA 117 (322)
T ss_dssp CEEEE
T ss_pred EEEec
Confidence 55443
No 259
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=41.02 E-value=1.7e+02 Score=24.94 Aligned_cols=203 Identities=10% Similarity=-0.010 Sum_probs=93.6
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEe--CCEEEEEcceeCC-----------ceeec
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVD--NTRVLIFGGMVEY-----------GKYSS 103 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~-----------~~~~~ 103 (390)
++.|||.-.. ..+..+|+.+...+.+.....-.....-..+++. ++.||+.-..... .....
T Consensus 91 ~g~l~v~d~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g 165 (322)
T 2fp8_A 91 NNQLYIVDCY-----YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTG 165 (322)
T ss_dssp TTEEEEEETT-----TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCE
T ss_pred CCcEEEEECC-----CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCc
Confidence 5778887431 2378889876655554321010011122334443 4678886422100 01124
Q ss_pred ceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEE-C-CEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCcee
Q psy1098 104 DLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLI-G-NKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTT 181 (390)
Q Consensus 104 ~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~-~-~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 181 (390)
.+++||+.+.+...+... . ..-..++.. + +.+|+.-.. .+.+++|++......
T Consensus 166 ~v~~~d~~~~~~~~~~~~--------~-~~p~gia~~~dg~~lyv~d~~----------------~~~I~~~~~~~~~~~ 220 (322)
T 2fp8_A 166 RLIKYDPSTKETTLLLKE--------L-HVPGGAEVSADSSFVLVAEFL----------------SHQIVKYWLEGPKKG 220 (322)
T ss_dssp EEEEEETTTTEEEEEEEE--------E-SCCCEEEECTTSSEEEEEEGG----------------GTEEEEEESSSTTTT
T ss_pred eEEEEeCCCCEEEEeccC--------C-ccCcceEECCCCCEEEEEeCC----------------CCeEEEEECCCCcCC
Confidence 689999987665443221 0 111122322 3 357775322 124777777642111
Q ss_pred eeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCC------ccCcEEEEecCCCeEeecccCCCCCCCCceeeE
Q psy1098 182 VWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGN------RLSDLFMLDINSMTWQKPQILGPQPLPRSLHTA 255 (390)
Q Consensus 182 ~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~------~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~ 255 (390)
....+.. .+. -..++.- .+++|||....... ....+.+||+....-..+......+ ...-.++
T Consensus 221 ~~~~~~~---~~g---P~gi~~d----~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~-~~~~~~~ 289 (322)
T 2fp8_A 221 TAEVLVK---IPN---PGNIKRN----ADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFA-GEHFEQI 289 (322)
T ss_dssp CEEEEEE---CSS---EEEEEEC----TTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTT-TSCCCEE
T ss_pred ccceEEe---CCC---CCCeEEC----CCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCc-cccceEE
Confidence 2222111 121 1223332 25678887532100 0245889998755444432211111 1122234
Q ss_pred EEECCEEEEEcCcccCCCccccccccccceecCceEEeecCCC
Q psy1098 256 CVIGDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEM 298 (390)
Q Consensus 256 ~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 298 (390)
+..+++|||..-. .+.|.+|++..+
T Consensus 290 ~~~~g~L~v~~~~------------------~~~i~~~~~~~~ 314 (322)
T 2fp8_A 290 QEHDGLLYIGTLF------------------HGSVGILVYDKK 314 (322)
T ss_dssp EEETTEEEEECSS------------------CSEEEEEEC---
T ss_pred EEeCCEEEEeecC------------------CCceEEEecccc
Confidence 4457889987543 356778877544
No 260
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=40.98 E-value=1.7e+02 Score=25.03 Aligned_cols=107 Identities=7% Similarity=-0.052 Sum_probs=53.9
Q ss_pred CCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCCc
Q psy1098 86 NTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTPS 163 (390)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~ 163 (390)
++.+++.|+.+ ..+..||..+.+-....... .. ....++.+ ++.+++.|+.+..
T Consensus 138 ~~~~l~s~s~d------g~i~~wd~~~~~~~~~~~~~-------~~-~~i~~~~~~pdg~~lasg~~dg~---------- 193 (343)
T 3lrv_A 138 NTEYFIWADNR------GTIGFQSYEDDSQYIVHSAK-------SD-VEYSSGVLHKDSLLLALYSPDGI---------- 193 (343)
T ss_dssp -CCEEEEEETT------CCEEEEESSSSCEEEEECCC-------SS-CCCCEEEECTTSCEEEEECTTSC----------
T ss_pred CCCEEEEEeCC------CcEEEEECCCCcEEEEEecC-------CC-CceEEEEECCCCCEEEEEcCCCE----------
Confidence 44566667653 34778888877654332210 11 11233333 5778888876543
Q ss_pred cccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCe
Q psy1098 164 YKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMT 236 (390)
Q Consensus 164 ~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~ 236 (390)
+..+|+.+..... ..+. ..... .-.++...+ ++..++.|+ + +.+.+||+.+..
T Consensus 194 ------i~iwd~~~~~~~~-~~~~--~~h~~--~v~~l~fs~----~g~~l~s~~-~----~~v~iwd~~~~~ 246 (343)
T 3lrv_A 194 ------LDVYNLSSPDQAS-SRFP--VDEEA--KIKEVKFAD----NGYWMVVEC-D----QTVVCFDLRKDV 246 (343)
T ss_dssp ------EEEEESSCTTSCC-EECC--CCTTS--CEEEEEECT----TSSEEEEEE-S----SBEEEEETTSST
T ss_pred ------EEEEECCCCCCCc-cEEe--ccCCC--CEEEEEEeC----CCCEEEEEe-C----CeEEEEEcCCCC
Confidence 7778887642110 1111 00111 111222222 566777776 3 368899987653
No 261
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=40.87 E-value=1.5e+02 Score=24.34 Aligned_cols=191 Identities=8% Similarity=-0.039 Sum_probs=97.8
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEeeeecCCCCCCCceeeEEEe--CCEEEEEcceeCCceeecceEEEEcCcce
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVD--NTRVLIFGGMVEYGKYSSDLYELQASKWE 114 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~~~~~ 114 (390)
++.||+.-.. ...+.++|+....-..+... .+ ..-+.++.. ++.||+.-.. ...+.++++....
T Consensus 47 ~~~ly~~d~~----~~~I~~~~~~g~~~~~~~~~-~~---~~p~~ia~d~~~~~lyv~d~~------~~~I~~~~~~g~~ 112 (267)
T 1npe_A 47 DKVVYWTDIS----EPSIGRASLHGGEPTTIIRQ-DL---GSPEGIALDHLGRTIFWTDSQ------LDRIEVAKMDGTQ 112 (267)
T ss_dssp TTEEEEEETT----TTEEEEEESSSCCCEEEECT-TC---CCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCS
T ss_pred CCEEEEEECC----CCEEEEEecCCCCcEEEEEC-CC---CCccEEEEEecCCeEEEEECC------CCEEEEEEcCCCC
Confidence 4678877542 35688899876543333211 11 122444443 5789987542 2457888886543
Q ss_pred eEEecCCCCCCCCCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCC
Q psy1098 115 WKRLKPKPPRFGSPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGL 192 (390)
Q Consensus 115 W~~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~ 192 (390)
-..+.... ..+. ..++.. ++++|+..... ..+.++++++.......... ..+
T Consensus 113 ~~~~~~~~-------~~~P-~~i~vd~~~g~lyv~~~~~--------------~~~~I~~~~~dg~~~~~~~~----~~~ 166 (267)
T 1npe_A 113 RRVLFDTG-------LVNP-RGIVTDPVRGNLYWTDWNR--------------DNPKIETSHMDGTNRRILAQ----DNL 166 (267)
T ss_dssp CEEEECSS-------CSSE-EEEEEETTTTEEEEEECCS--------------SSCEEEEEETTSCCCEEEEC----TTC
T ss_pred EEEEEECC-------CCCc-cEEEEeeCCCEEEEEECCC--------------CCcEEEEEecCCCCcEEEEE----CCC
Confidence 33332210 1111 223333 57899874321 11246677665321111111 111
Q ss_pred CCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEECCEEEEEcCcccCC
Q psy1098 193 PSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVIGDRMFIFGGWVPIL 272 (390)
Q Consensus 193 p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG~~~~~ 272 (390)
..-..++..+ .++.||+.-... +.|+++|+....-..+.. ....| .+++.-++.+|+....
T Consensus 167 ---~~P~gia~d~---~~~~lyv~d~~~----~~I~~~~~~g~~~~~~~~--~~~~P---~gi~~d~~~lyva~~~---- 227 (267)
T 1npe_A 167 ---GLPNGLTFDA---FSSQLCWVDAGT----HRAECLNPAQPGRRKVLE--GLQYP---FAVTSYGKNLYYTDWK---- 227 (267)
T ss_dssp ---SCEEEEEEET---TTTEEEEEETTT----TEEEEEETTEEEEEEEEE--CCCSE---EEEEEETTEEEEEETT----
T ss_pred ---CCCcEEEEcC---CCCEEEEEECCC----CEEEEEecCCCceEEEec--CCCCc---eEEEEeCCEEEEEECC----
Confidence 1112333332 257888886432 578999987644333211 11122 3455568889987532
Q ss_pred CccccccccccceecCceEEeecCCCee
Q psy1098 273 KDESRSLHEKEWKCSNQLACLHLPEMTW 300 (390)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~d~~~~~W 300 (390)
...+.++|+.+.+-
T Consensus 228 --------------~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 228 --------------TNSVIAMDLAISKE 241 (267)
T ss_dssp --------------TTEEEEEETTTTEE
T ss_pred --------------CCeEEEEeCCCCCc
Confidence 45789999987654
No 262
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=40.02 E-value=1.9e+02 Score=25.39 Aligned_cols=141 Identities=11% Similarity=0.147 Sum_probs=72.0
Q ss_pred CCEEEEEcceeCCceeecceEEEEcCcce---eEEecCCCCCCCCCCCCCccceEEEE---CCEEEEEcCccCCCCCCCC
Q psy1098 86 NTRVLIFGGMVEYGKYSSDLYELQASKWE---WKRLKPKPPRFGSPPCPRLGHSFTLI---GNKVYLFGGLANSGGDETK 159 (390)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~v~~~d~~~~~---W~~~~~~~~~~~~~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~~~ 159 (390)
++.+||.+.... ..|+++++.... |-.-.+ ....+.+..-.++ ++.|++..+ ..
T Consensus 147 ~GnaYVt~s~~~-----~~I~rV~pdG~~~~~~~~~~~-------~~~~~~G~nGIv~~pdg~~Liv~~~-~g------- 206 (334)
T 2p9w_A 147 DGNSYVAFALGM-----PAIARVSADGKTVSTFAWESG-------NGGQRPGYSGITFDPHSNKLIAFGG-PR------- 206 (334)
T ss_dssp TSCEEEEEEESS-----CEEEEECTTSCCEEEEEECCC-------CSSSCCSCSEEEEETTTTEEEEESS-SS-------
T ss_pred CCCEEEeCCCCC-----CeEEEEeCCCCEEeeeeecCC-------CcccccCcceEEEeCCCCEEEEEcC-CC-------
Confidence 468999765420 458999987552 432111 1234555554444 346777665 33
Q ss_pred CCCccccccceeeeecCCCceeeeeccccC--CCC-CCCC-ceeeeEEeeccCCCcEEEEEc-CCCCCccCcEEEEecCC
Q psy1098 160 PTPSYKYLDDFYTLELKSGHTTVWDMPGTY--GGL-PSPR-ESHTACSWTDEYKNTKLIIYG-GMSGNRLSDLFMLDINS 234 (390)
Q Consensus 160 ~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~--~~~-p~~r-~~~~~~~~~~~~~~~~i~v~G-G~~~~~~~~v~~~d~~~ 234 (390)
.+++||+..+ ..| .++.. +.. ...- .+...... +++++++. +. +.++++-...
T Consensus 207 ---------~L~~fD~~~p--v~~-~v~~~~~G~~~~~~~~dgilp~~~-----~G~vllV~~~~-----~~~~~l~S~D 264 (334)
T 2p9w_A 207 ---------ALTAFDVSKP--YAW-PEPVKINGDFGTLSGTEKIVTVPV-----GNESVLVGARA-----PYAISFRSWD 264 (334)
T ss_dssp ---------SEEEEECSSS--SCC-CEECEESSCCCCCTTEEEEEEEEE-----TTEEEEEEEET-----TEEEEEECSS
T ss_pred ---------eEEEEcCCCC--cce-eecccccCCcccccCccccccccc-----CCEEEEEEcCC-----CCEEEEECCC
Confidence 3888998753 233 22211 211 1111 11111123 67775444 33 3345555455
Q ss_pred CeEeecccCCCCCC---CCceeeEEE----ECCEEEEEcCcc
Q psy1098 235 MTWQKPQILGPQPL---PRSLHTACV----IGDRMFIFGGWV 269 (390)
Q Consensus 235 ~~W~~~~~~~~~p~---~r~~~~~~~----~~~~i~i~GG~~ 269 (390)
+ |+.....+..|. ++.....++ .+++||++.+.-
T Consensus 265 g-W~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~f 305 (334)
T 2p9w_A 265 N-WKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSAFF 305 (334)
T ss_dssp T-TSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEECCG
T ss_pred C-cceeEEeeeecCccccCceeEEEEeccccCCeEEEEeeec
Confidence 5 888655444443 333334444 568999998764
No 263
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=37.90 E-value=2.8e+02 Score=26.66 Aligned_cols=67 Identities=15% Similarity=0.030 Sum_probs=33.1
Q ss_pred ceEEEECCCCcEEeeeecCCCCCCCceeeEEEeCCEEEEEcceeCCc---eeecceEEEEcCcceeEEec
Q psy1098 53 ELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVDNTRVLIFGGMVEYG---KYSSDLYELQASKWEWKRLK 119 (390)
Q Consensus 53 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~---~~~~~v~~~d~~~~~W~~~~ 119 (390)
.++++|..+++-..+.................-+++.++++...... .....++++|..+.+-..+.
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 107 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLD 107 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECC
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEecc
Confidence 68888887776554442111100011111223344544554432111 12367889999887655554
No 264
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=37.00 E-value=2.5e+02 Score=25.70 Aligned_cols=120 Identities=14% Similarity=0.151 Sum_probs=63.4
Q ss_pred CCCCCCceeeeEEeCCEEEEEccCCCC-cccce--EEEEC----CCCc-EEeeeecCCCCCCCceeeEEEeCCEEEEEcc
Q psy1098 23 PQPRPRHGHRAVAIKDLMLVFGGGNEG-IVEEL--HVFNT----ATNQ-WFIPTLKGDIPPGCAAYGIVVDNTRVLIFGG 94 (390)
Q Consensus 23 ~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~--~~~d~----~~~~-W~~~~~~~~~p~~r~~~~~~~~~~~iyv~GG 94 (390)
..|..-.-|+.+.+++.-|.+|=.+.. ....+ ..|.. -... =+.++. +....-+.-++-..++.||+.--
T Consensus 279 ~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~s--ey~~~AsEPCvkyYdgvLyLtTR 356 (670)
T 3ju4_A 279 LIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPS--EYEPDASEPCIKYYDGVLYLITR 356 (670)
T ss_dssp SCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCG--GGCTTEEEEEEEEETTEEEEEEE
T ss_pred cccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechh--hhccccccchhhhhCCEEEEEec
Confidence 556667899999999888888842221 11222 22211 1111 122221 11122223344467899998754
Q ss_pred eeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEECCEEEEEcCc
Q psy1098 95 MVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLIGNKVYLFGGL 150 (390)
Q Consensus 95 ~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~ 150 (390)
.......-+.+.+-+.....|+.+.-.. -.-....-.+..++.||+||--
T Consensus 357 gt~~~~~GS~L~rs~d~Gq~w~slrfp~------nvHhtnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 357 GTRGDRLGSSLHRSRDIGQTWESLRFPH------NVHHTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp ESCTTSCCCEEEEESSTTSSCEEEECTT------CCCSSCCCEEEETTEEEEEEEC
T ss_pred CcCCCCCcceeeeecccCCchhheeccc------cccccCCCcceeCCEEEEEecc
Confidence 3323233345666666677788765310 0112233356679999999864
No 265
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=36.67 E-value=3.4e+02 Score=27.16 Aligned_cols=136 Identities=10% Similarity=0.004 Sum_probs=69.8
Q ss_pred eCCEEEEEcceeCCceeecceEEEEcCcceeEEecCCCCCCCCCCCCCccceEEEE--CCEEEEEc-CccCCCCCCCCCC
Q psy1098 85 DNTRVLIFGGMVEYGKYSSDLYELQASKWEWKRLKPKPPRFGSPPCPRLGHSFTLI--GNKVYLFG-GLANSGGDETKPT 161 (390)
Q Consensus 85 ~~~~iyv~GG~~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~G-G~~~~~~~~~~~~ 161 (390)
.+++||+.-.. ...|+++++....-..+.... +..| ..+++. ++.||+.- |.
T Consensus 481 ~~~~LY~tD~~------~~~I~v~~ldG~~~~~l~~~~-----l~~P---~gIaVDp~~g~LYwtD~g~----------- 535 (791)
T 3m0c_C 481 IHSNIYWTDSV------LGTVSVADTKGVKRKTLFREN-----GSKP---RAIVVDPVHGFMYWTDWGT----------- 535 (791)
T ss_dssp TTTEEEEEETT------TTEEEEEETTSSSEEEEEECT-----TCCE---EEEEEETTTTEEEEEECSS-----------
T ss_pred cCCcEEEEecC------CCeEEEEeCCCCeEEEEEeCC-----CCCc---ceEEEecCCCCEEEecCCC-----------
Confidence 46789987532 245888888766544443210 1111 233332 57898863 21
Q ss_pred CccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecc
Q psy1098 162 PSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQ 241 (390)
Q Consensus 162 ~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~ 241 (390)
...++++++......... ...+..| ..+++-+ .+++||+.-.. .+.|+++++....-+.+.
T Consensus 536 -----~~~I~~~~~dG~~~~~lv----~~~l~~P---~GLavD~---~~~~LYwaD~~----~~~I~~~d~dG~~~~~v~ 596 (791)
T 3m0c_C 536 -----PAKIKKGGLNGVDIYSLV----TENIQWP---NGITLDL---LSGRLYWVDSK----LHSISSIDVNGGNRKTIL 596 (791)
T ss_dssp -----SCEEEEEETTSCCEEEEE----CSSCSCE---EEEEEET---TTTEEEEEETT----TTEEEEEETTSCSCEEEE
T ss_pred -----CCeEEEEecCCCceEEEE----eCCCCCc---eEEEEec---CCCeEEEEeCC----CCcEEEEecCCCceEEEe
Confidence 124777777653211121 1112111 1222221 27899998533 267999998754433322
Q ss_pred c-CCCCCCCCceeeEEEECCEEEEEcC
Q psy1098 242 I-LGPQPLPRSLHTACVIGDRMFIFGG 267 (390)
Q Consensus 242 ~-~~~~p~~r~~~~~~~~~~~i~i~GG 267 (390)
. ...++ ...++++.+++||+.-.
T Consensus 597 ~~~~~l~---~P~glav~~~~lYwtD~ 620 (791)
T 3m0c_C 597 EDEKRLA---HPFSLAVFEDKVFWTDI 620 (791)
T ss_dssp ECTTTTS---SEEEEEEETTEEEEEET
T ss_pred cCCCccC---CCCEEEEeCCEEEEEEC
Confidence 1 11222 23466667889998853
No 266
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=36.65 E-value=7.7 Score=34.86 Aligned_cols=53 Identities=8% Similarity=0.122 Sum_probs=24.6
Q ss_pred eeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCCccCcEEEEecCCC--eEee
Q psy1098 170 FYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGNRLSDLFMLDINSM--TWQK 239 (390)
Q Consensus 170 ~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~--~W~~ 239 (390)
++.+|..+.. ..|+.-. +. . ..+.+.. ++++|+.+..+ ..++.+|.++. .|+.
T Consensus 21 v~a~d~~tG~-~~W~~~~--~~----~-~s~p~~~-----~g~~~v~~s~d----g~l~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 21 LHAVSKRTGS-IKWTLKE--DP----V-LQVPTHV-----EEPAFLPDPND----GSLYTLGSKNNEGLTKL 75 (369)
T ss_dssp EEEEETTTCC-EEEEEEC--CC----S-CCCC----------CCEEECTTT----CCEEEC-----CCSEEC
T ss_pred EEEEECCCCC-EEEEecC--CC----c-eecceEc-----CCCEEEEeCCC----CEEEEEECCCCceeeee
Confidence 7888887653 4687622 11 1 1122222 56677776544 35888888654 3553
No 267
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=35.24 E-value=3.3e+02 Score=26.60 Aligned_cols=67 Identities=10% Similarity=0.066 Sum_probs=34.5
Q ss_pred cceEEEECCCCcEEeeeecCCCCCC-Cce--eeEEEeCCEEEEEcceeCC---ceeecceEEEEcCcceeEEec
Q psy1098 52 EELHVFNTATNQWFIPTLKGDIPPG-CAA--YGIVVDNTRVLIFGGMVEY---GKYSSDLYELQASKWEWKRLK 119 (390)
Q Consensus 52 ~~~~~~d~~~~~W~~~~~~~~~p~~-r~~--~~~~~~~~~iyv~GG~~~~---~~~~~~v~~~d~~~~~W~~~~ 119 (390)
..+.+||..+++-..+......... ... +++ .-+++.++++..... .....++|.+|..+.+..++.
T Consensus 36 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~ 108 (740)
T 4a5s_A 36 NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSI-SPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEE 108 (740)
T ss_dssp TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEE-CTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS
T ss_pred CcEEEEECCCCceEEEEechhhhhhcccccceEE-CCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcc
Confidence 4688999988886555322111111 111 222 233443344443211 123467899999988765543
No 268
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=33.34 E-value=1.8e+02 Score=24.98 Aligned_cols=65 Identities=9% Similarity=0.033 Sum_probs=38.9
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEE-EECCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTAC-VIGDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~-~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
++.+|+++... ..|++||+.+.+.+.... +. .-.+.+ .-++++++... .
T Consensus 60 ~~~l~~~d~~~----~~i~~~d~~~~~~~~~~~----~~--~v~~i~~~~dg~l~v~~~--------------------~ 109 (326)
T 2ghs_A 60 SGTAWWFNILE----RELHELHLASGRKTVHAL----PF--MGSALAKISDSKQLIASD--------------------D 109 (326)
T ss_dssp TTEEEEEEGGG----TEEEEEETTTTEEEEEEC----SS--CEEEEEEEETTEEEEEET--------------------T
T ss_pred CCEEEEEECCC----CEEEEEECCCCcEEEEEC----CC--cceEEEEeCCCeEEEEEC--------------------C
Confidence 47788776432 469999999877654321 11 112222 23677777531 3
Q ss_pred ceEEeecCCCeeeecc
Q psy1098 289 QLACLHLPEMTWEDLS 304 (390)
Q Consensus 289 ~~~~~d~~~~~W~~v~ 304 (390)
.+++||+.+.+.+.+.
T Consensus 110 gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 110 GLFLRDTATGVLTLHA 125 (326)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred CEEEEECCCCcEEEEe
Confidence 4778888777766553
No 269
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=32.94 E-value=2.6e+02 Score=24.73 Aligned_cols=26 Identities=15% Similarity=0.152 Sum_probs=19.0
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEee
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQK 239 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~ 239 (390)
+++.++.|+.+ ..+.+||+.+.+...
T Consensus 225 ~~~~l~s~~~d----g~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 225 ECCVLILGTTR----GIIDIWDIRFNVLIR 250 (437)
T ss_dssp TSCEEEEEETT----SCEEEEETTTTEEEE
T ss_pred CCCEEEEEcCC----CeEEEEEcCCccEEE
Confidence 67778888776 468899998765443
No 270
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=32.60 E-value=3.9e+02 Score=26.69 Aligned_cols=206 Identities=5% Similarity=-0.004 Sum_probs=99.4
Q ss_pred ceEEEECCCCcEEeeeecCCCCCCCceeeEEEe--CCEEEEEcceeCCceeecceEEEEcCcc----eeEEecCCCCCCC
Q psy1098 53 ELHVFNTATNQWFIPTLKGDIPPGCAAYGIVVD--NTRVLIFGGMVEYGKYSSDLYELQASKW----EWKRLKPKPPRFG 126 (390)
Q Consensus 53 ~~~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~~~~----~W~~~~~~~~~~~ 126 (390)
.+..+++....+..+.. ..+...+++.. +++||+.-.. ...|+++++... ....+....
T Consensus 405 ~Ir~i~l~~~~~~~l~~-----~~~~~~gl~~d~~~~~lY~sD~~------~~~I~~~~l~g~~~~~~~~~vi~~~---- 469 (791)
T 3m0c_C 405 EVRKMTLDRSEYTSLIP-----NLRNVVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRD---- 469 (791)
T ss_dssp SEEEECTTSCCCEEEEC-----SCSSEEEEEEETTTTEEEEEETT------TTEEEEEEC--------CEEEECSS----
T ss_pred ceeEeeccCCcceeeec-----CCCceEEEeecccCCeeEEeecc------ceeEEEEeccCCCCCcceeEEEecC----
Confidence 45556666555555431 12223344433 5788887543 134777776542 222222100
Q ss_pred CCCCCCccceEEEE--CCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeeccccCCCCCCCCceeeeEEe
Q psy1098 127 SPPCPRLGHSFTLI--GNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSW 204 (390)
Q Consensus 127 ~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~ 204 (390)
. ..-..+++. ++.||+.-.. .+.|.++++.... -..+. ...+..| ..+++.
T Consensus 470 ---l-~~P~GLAvD~~~~~LY~tD~~----------------~~~I~v~~ldG~~---~~~l~-~~~l~~P---~gIaVD 522 (791)
T 3m0c_C 470 ---I-QAPDGLAVDWIHSNIYWTDSV----------------LGTVSVADTKGVK---RKTLF-RENGSKP---RAIVVD 522 (791)
T ss_dssp ---C-SCCCEEEEETTTTEEEEEETT----------------TTEEEEEETTSSS---EEEEE-ECTTCCE---EEEEEE
T ss_pred ---C-CCcceeeeeecCCcEEEEecC----------------CCeEEEEeCCCCe---EEEEE-eCCCCCc---ceEEEe
Confidence 0 111223332 5789987432 2247777776522 11111 1122222 234443
Q ss_pred eccCCCcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE---CCEEEEEcCcccCCCcccccccc
Q psy1098 205 TDEYKNTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI---GDRMFIFGGWVPILKDESRSLHE 281 (390)
Q Consensus 205 ~~~~~~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~---~~~i~i~GG~~~~~~~~~~~~~~ 281 (390)
+. .+.||+.--.. ...|+++++....-+.+. ...+. ....+++ +++||+.-..
T Consensus 523 p~---~g~LYwtD~g~---~~~I~~~~~dG~~~~~lv-~~~l~----~P~GLavD~~~~~LYwaD~~------------- 578 (791)
T 3m0c_C 523 PV---HGFMYWTDWGT---PAKIKKGGLNGVDIYSLV-TENIQ----WPNGITLDLLSGRLYWVDSK------------- 578 (791)
T ss_dssp TT---TTEEEEEECSS---SCEEEEEETTSCCEEEEE-CSSCS----CEEEEEEETTTTEEEEEETT-------------
T ss_pred cC---CCCEEEecCCC---CCeEEEEecCCCceEEEE-eCCCC----CceEEEEecCCCeEEEEeCC-------------
Confidence 22 68899875211 146888888765444322 11121 2223333 6889998432
Q ss_pred ccceecCceEEeecCCCeeeecccccccCCCCCCCCCcceeeeCCEEEEEecc
Q psy1098 282 KEWKCSNQLACLHLPEMTWEDLSVEVTDDFLPKPRAGHCASVINSRMYIWSGR 334 (390)
Q Consensus 282 ~~~~~~~~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~ 334 (390)
...|+++++....=+.+... ...++ ..+++++.+++||+.--.
T Consensus 579 -----~~~I~~~d~dG~~~~~v~~~--~~~l~---~P~glav~~~~lYwtD~~ 621 (791)
T 3m0c_C 579 -----LHSISSIDVNGGNRKTILED--EKRLA---HPFSLAVFEDKVFWTDII 621 (791)
T ss_dssp -----TTEEEEEETTSCSCEEEEEC--TTTTS---SEEEEEEETTEEEEEETT
T ss_pred -----CCcEEEEecCCCceEEEecC--CCccC---CCCEEEEeCCEEEEEECC
Confidence 46788999876543333221 01122 234666678899988644
No 271
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=31.72 E-value=1.1e+02 Score=25.05 Aligned_cols=61 Identities=10% Similarity=0.166 Sum_probs=37.9
Q ss_pred CCEEEEEccCCCCcccceEEEECCCCcEEee--eecCCCCC------C-CceeeEEE-eCCEEEEEcceeCCceeecceE
Q psy1098 37 KDLMLVFGGGNEGIVEELHVFNTATNQWFIP--TLKGDIPP------G-CAAYGIVV-DNTRVLIFGGMVEYGKYSSDLY 106 (390)
Q Consensus 37 ~~~iyv~GG~~~~~~~~~~~~d~~~~~W~~~--~~~~~~p~------~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~ 106 (390)
++++|+|-| +..|+||...++...- ......|. + ....++.. .++++|+|=|. ..|
T Consensus 127 ~gk~yfFkG------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~--------~yw 192 (225)
T 3oyo_A 127 GKEVYLFKG------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ--------NYV 192 (225)
T ss_dssp TTEEEEEET------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT--------EEE
T ss_pred CCcEEEEeC------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC--------EEE
Confidence 689999999 6789999766654321 11101221 2 22333332 47899999774 489
Q ss_pred EEEcC
Q psy1098 107 ELQAS 111 (390)
Q Consensus 107 ~~d~~ 111 (390)
+||..
T Consensus 193 r~d~~ 197 (225)
T 3oyo_A 193 RIDFT 197 (225)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 99987
No 272
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=31.14 E-value=2.6e+02 Score=24.27 Aligned_cols=102 Identities=10% Similarity=0.088 Sum_probs=53.2
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEE-ECCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACV-IGDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
+++.++.++.++.....++.++....................-.+++. -++++++.|+. -.
T Consensus 230 dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~------------------D~ 291 (365)
T 4h5i_A 230 DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN------------------DN 291 (365)
T ss_dssp TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET------------------TS
T ss_pred CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC------------------CC
Confidence 778888877654433456777776665543211000001111112222 26788888875 24
Q ss_pred ceEEeecCCCeeeecccccccCCCCCCCCC-cceeee--CCEEEEEeccCCc
Q psy1098 289 QLACLHLPEMTWEDLSVEVTDDFLPKPRAG-HCASVI--NSRMYIWSGRDDY 337 (390)
Q Consensus 289 ~~~~~d~~~~~W~~v~~~~~~~~~p~~r~~-~~~~~~--~~~l~v~GG~~~~ 337 (390)
.|.+||..+.+-. .. +.....+ -.++.+ ++++++-|+.++.
T Consensus 292 ~V~iwd~~~~~~~--~~------~~~gH~~~V~~v~fSpdg~~laS~S~D~t 335 (365)
T 4h5i_A 292 SIALVKLKDLSMS--KI------FKQAHSFAITEVTISPDSTYVASVSAANT 335 (365)
T ss_dssp CEEEEETTTTEEE--EE------ETTSSSSCEEEEEECTTSCEEEEEETTSE
T ss_pred EEEEEECCCCcEE--EE------ecCcccCCEEEEEECCCCCEEEEEeCCCe
Confidence 7888998876522 11 1111111 122333 6788888888754
No 273
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=30.93 E-value=2.4e+02 Score=23.83 Aligned_cols=18 Identities=22% Similarity=-0.029 Sum_probs=13.6
Q ss_pred ccceEEEECCCCcEEeee
Q psy1098 51 VEELHVFNTATNQWFIPT 68 (390)
Q Consensus 51 ~~~~~~~d~~~~~W~~~~ 68 (390)
...++.+|..+++...+.
T Consensus 84 ~~~l~~~~~~~g~~~~l~ 101 (347)
T 2gop_A 84 VSEIWVADLETLSSKKIL 101 (347)
T ss_dssp EEEEEEEETTTTEEEEEE
T ss_pred cceEEEEECCCCceEEEE
Confidence 456899999888776665
No 274
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=30.82 E-value=59 Score=26.86 Aligned_cols=16 Identities=19% Similarity=0.262 Sum_probs=13.7
Q ss_pred CcEEEEEcCCCCCccCcEEEEe
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLD 231 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d 231 (390)
++++|+|-| +.+|+|+
T Consensus 72 ~g~~~fFKg------~~~Wr~~ 87 (227)
T 3lp9_A 72 NNEAFIFYE------NFCALID 87 (227)
T ss_dssp TTEEEEEET------TEEEEEE
T ss_pred CCEEEEEeC------CEEEEEe
Confidence 899999987 5688888
No 275
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=30.70 E-value=2.8e+02 Score=24.45 Aligned_cols=215 Identities=8% Similarity=-0.003 Sum_probs=0.0
Q ss_pred CCEEEEEccCCCC-----cccceEEEECCCCcEEeeeecCCCC--------CCCceeeEEEeCCEEEEEcceeCCceeec
Q psy1098 37 KDLMLVFGGGNEG-----IVEELHVFNTATNQWFIPTLKGDIP--------PGCAAYGIVVDNTRVLIFGGMVEYGKYSS 103 (390)
Q Consensus 37 ~~~iyv~GG~~~~-----~~~~~~~~d~~~~~W~~~~~~~~~p--------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 103 (390)
+..+|+..-.... ..+.+..||+.+.+-.... ..+ ..-...++...+..||+. +....+
T Consensus 77 g~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i---~~~~~~~~~~g~~p~~~~~spDG~~l~v~-----n~~~~~ 148 (373)
T 2mad_H 77 GSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADI---ELPDAPRFDVGPYSWMNANTPNNADLLFF-----QFAAGP 148 (373)
T ss_pred CCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEE---ECCCccccccCCCccceEECCCCCEEEEE-----ecCCCC
Q ss_pred ceEEEEcCcceeEEe-cCCCCCCCCCCCCCccceEEEECCEEEEE--------------------------------cCc
Q psy1098 104 DLYELQASKWEWKRL-KPKPPRFGSPPCPRLGHSFTLIGNKVYLF--------------------------------GGL 150 (390)
Q Consensus 104 ~v~~~d~~~~~W~~~-~~~~~~~~~~p~~r~~~~~~~~~~~l~v~--------------------------------GG~ 150 (390)
.+.++| .+.+-... -+.+......|.....+.+..-+++++++ ++.
T Consensus 149 ~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 227 (373)
T 2mad_H 149 AVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRI 227 (373)
T ss_pred eEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEE
Q ss_pred cCCCCCCCCCCCccccccceeeeecCCCceeeeecc-------ccCCCCCCCCceeeeEEeeccCCCcEEEEEcCCCCC-
Q psy1098 151 ANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMP-------GTYGGLPSPRESHTACSWTDEYKNTKLIIYGGMSGN- 222 (390)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~-------~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG~~~~- 222 (390)
--. .....++.+|+.......-..+ ...+..|......+...- .+++|+.......
T Consensus 228 ~~~-----------~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d-----~~~lyV~~~~~~~~ 291 (373)
T 2mad_H 228 VWP-----------VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKS-----SDGIYLLTSEQSAW 291 (373)
T ss_pred EEE-----------cCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCC-----CCEEEEEeccCCcc
Q ss_pred ----ccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE--CC-EEEEEcCcccCCCccccccccccceecCceEEeec
Q psy1098 223 ----RLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI--GD-RMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHL 295 (390)
Q Consensus 223 ----~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~-~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 295 (390)
.-++|+++|+.+.+-.. ..+.+...+++++. +. .+|+..+. .+++.++|+
T Consensus 292 ~~~~~~~~V~VID~~t~~vv~-----~i~~g~~p~~i~~s~Dg~~~l~v~~~~------------------~~~V~ViD~ 348 (373)
T 2mad_H 292 KLHAAAKEVTSVTGLVGQTSS-----QISLGHDVDAISVAQDGGPDLYALSAG------------------TEVLHIYDA 348 (373)
T ss_pred cccCCCCeEEEEECCCCEEEE-----EEECCCCcCeEEECCCCCeEEEEEcCC------------------CCeEEEEEC
Q ss_pred CCCe
Q psy1098 296 PEMT 299 (390)
Q Consensus 296 ~~~~ 299 (390)
++.+
T Consensus 349 ~t~~ 352 (373)
T 2mad_H 349 GAGD 352 (373)
T ss_pred CCCC
No 276
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=28.81 E-value=2.6e+02 Score=23.51 Aligned_cols=70 Identities=9% Similarity=0.039 Sum_probs=38.6
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCeEeecccCCCCCCCCceeeEEEE-CCEEEEEcCcccCCCccccccccccceecC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMTWQKPQILGPQPLPRSLHTACVI-GDRMFIFGGWVPILKDESRSLHEKEWKCSN 288 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~ 288 (390)
+++||+..-.. ..|+++|+....-.... .+ ..-++++.. ++++|+...... ..
T Consensus 42 ~g~lyv~d~~~----~~I~~~d~~g~~~~~~~-~~-----~~p~gia~~~dG~l~vad~~~~----------------~~ 95 (306)
T 2p4o_A 42 DGTIFVTNHEV----GEIVSITPDGNQQIHAT-VE-----GKVSGLAFTSNGDLVATGWNAD----------------SI 95 (306)
T ss_dssp TSCEEEEETTT----TEEEEECTTCCEEEEEE-CS-----SEEEEEEECTTSCEEEEEECTT----------------SC
T ss_pred CCCEEEEeCCC----CeEEEECCCCceEEEEe-CC-----CCceeEEEcCCCcEEEEeccCC----------------cc
Confidence 56788885322 46899998764322111 11 122333333 577887653100 12
Q ss_pred ceEEeecCCCeeeeccc
Q psy1098 289 QLACLHLPEMTWEDLSV 305 (390)
Q Consensus 289 ~~~~~d~~~~~W~~v~~ 305 (390)
.++.+|+.+.+.+.+..
T Consensus 96 ~v~~~d~~~g~~~~~~~ 112 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLT 112 (306)
T ss_dssp EEEEEECTTSCEEEEEE
T ss_pred eEEEEcCCCCeEEEEEe
Confidence 47788888887766554
No 277
>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}
Probab=27.45 E-value=53 Score=23.05 Aligned_cols=34 Identities=26% Similarity=0.489 Sum_probs=23.3
Q ss_pred CCCCCCceeEEec-ccceEEEeccCccccceeeeC
Q psy1098 357 KPGPPGRIQLVRA-ATNNLEICWPGHPIADSYAIY 390 (390)
Q Consensus 357 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 390 (390)
.|..|..+..... ....+.+.|.....+.+|.+|
T Consensus 4 ~P~aP~~l~a~~~~~~~~v~LsW~~~~~~~~Y~Vy 38 (103)
T 3mpc_A 4 APAFPTGLSAVLDSSGNTANLTWNAAPGANSYNVK 38 (103)
T ss_dssp CCCCCEEEEEEECTTSCCEEEEEECCTTCSEEEEE
T ss_pred CCCCCceeEEEEeCCCCEEEEEEECCCCCCEEEEE
Confidence 4555555555443 345789999998888888876
No 278
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=26.98 E-value=5.6e+02 Score=26.74 Aligned_cols=165 Identities=12% Similarity=0.085 Sum_probs=79.2
Q ss_pred ccceEEEECCEEEEEcCccCCCCCCCCCCCccccccceeeeecCCCceeeeecccc-CCCCCCCCceeeeEEeeccCCCc
Q psy1098 133 LGHSFTLIGNKVYLFGGLANSGGDETKPTPSYKYLDDFYTLELKSGHTTVWDMPGT-YGGLPSPRESHTACSWTDEYKNT 211 (390)
Q Consensus 133 ~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~W~~~~~-~~~~p~~r~~~~~~~~~~~~~~~ 211 (390)
.++++....+.+ ++|.-... .+...++.|..... ..|..... .+.......+.+++... .. +.
T Consensus 335 ~GfSa~~t~d~~-~~GapG~~-----------~w~G~v~~~~~~~~--~~~~~~~~~~~~~~~sylGySVa~~~-~~-g~ 398 (1095)
T 3k6s_A 335 EGFSAVFTPDGP-VLGAVGSF-----------TWSGGAFLYPPNMS--PTFINMSQENVDMRDSYLGYSTELAL-WK-GV 398 (1095)
T ss_dssp TTSSEECCTTCC-EEEESCST-----------TTTBEEEECCSSSC--CEEECCCSSCCCCCSCCBTSSEECCC-CS-SS
T ss_pred ccccceecCCcc-eEcccccC-----------CccceeEEecCCCc--ceeeccccccccccccccceeeEEec-cC-Cc
Confidence 455544444444 66654332 44455676665431 22332211 11222222344444321 11 23
Q ss_pred EEEEEcCCCCCccCcEEEEecCCCeEeeccc-CCCCCCCCceeeEEEEC------CEEEEEcCcccCCCccccccccccc
Q psy1098 212 KLIIYGGMSGNRLSDLFMLDINSMTWQKPQI-LGPQPLPRSLHTACVIG------DRMFIFGGWVPILKDESRSLHEKEW 284 (390)
Q Consensus 212 ~i~v~GG~~~~~~~~v~~~d~~~~~W~~~~~-~~~~p~~r~~~~~~~~~------~~i~i~GG~~~~~~~~~~~~~~~~~ 284 (390)
..+|+|--.......+++|......|+.... .+.......+.+.++.+ ..++++|.-.....
T Consensus 399 ~~~v~GAP~~~~~G~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~----------- 467 (1095)
T 3k6s_A 399 QSLVLGAPRYQHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQ----------- 467 (1095)
T ss_dssp CEEEEEETTGGGTCEEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSS-----------
T ss_pred eEEEEEcccccccceEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCc-----------
Confidence 4466663322234568888887777877442 33444446666776642 35777774221110
Q ss_pred eecCceEEeecCC--CeeeecccccccCCCCCCCCCcceeee
Q psy1098 285 KCSNQLACLHLPE--MTWEDLSVEVTDDFLPKPRAGHCASVI 324 (390)
Q Consensus 285 ~~~~~~~~~d~~~--~~W~~v~~~~~~~~~p~~r~~~~~~~~ 324 (390)
.....+++|.... ..|............+..|++++.+.+
T Consensus 468 ~~~G~Vyvy~~~~~~~~~~~~~~l~g~~~~~~~~FG~sva~~ 509 (1095)
T 3k6s_A 468 TRGGQVSVCPLPRGWRRWWCDAVLYGEQGHPWGRFGAALTVL 509 (1095)
T ss_dssp CCCBCEEEEECCSSTTCCCSCSSCCCCCSCSSCCBTSCEEEE
T ss_pred CCCCEEEEEEeCCCCcceeeeEEeecccCCccccCccceEee
Confidence 0135678875433 457654321111112457888877764
No 279
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=26.43 E-value=52 Score=29.28 Aligned_cols=46 Identities=15% Similarity=0.325 Sum_probs=23.0
Q ss_pred CcEEEEEcCCCCCccCcEEEEecCCCe--EeecccCCCCCCCCceeeEEEECCEEEEEcC
Q psy1098 210 NTKLIIYGGMSGNRLSDLFMLDINSMT--WQKPQILGPQPLPRSLHTACVIGDRMFIFGG 267 (390)
Q Consensus 210 ~~~i~v~GG~~~~~~~~v~~~d~~~~~--W~~~~~~~~~p~~r~~~~~~~~~~~i~i~GG 267 (390)
++.||+.+ .+ ..++.+|..+.+ |+... +. ...+.++.++++|+.++
T Consensus 9 ~~~v~~gs-~d----g~v~a~d~~tG~~~W~~~~--~~-----~~s~p~~~~g~~~v~~s 56 (369)
T 2hz6_A 9 ETLLFVST-LD----GSLHAVSKRTGSIKWTLKE--DP-----VLQVPTHVEEPAFLPDP 56 (369)
T ss_dssp TTEEEEEE-TT----SEEEEEETTTCCEEEEEEC--CC-----SCCCC-----CCEEECT
T ss_pred CCEEEEEc-CC----CEEEEEECCCCCEEEEecC--CC-----ceecceEcCCCEEEEeC
Confidence 56666554 32 368899987654 87622 11 11222344666777764
No 280
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=23.29 E-value=3.8e+02 Score=23.51 Aligned_cols=21 Identities=10% Similarity=0.319 Sum_probs=16.0
Q ss_pred EEEEEcCCCCCccCcEEEEecCCCe
Q psy1098 212 KLIIYGGMSGNRLSDLFMLDINSMT 236 (390)
Q Consensus 212 ~i~v~GG~~~~~~~~v~~~d~~~~~ 236 (390)
.+++.|+.+ ..+.+||+.+.+
T Consensus 240 ~~l~s~~~d----g~i~iwd~~~~~ 260 (447)
T 3dw8_B 240 NTFVYSSSK----GTIRLCDMRASA 260 (447)
T ss_dssp TEEEEEETT----SCEEEEETTTCS
T ss_pred cEEEEEeCC----CeEEEEECcCCc
Confidence 688888776 468889988765
No 281
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=22.06 E-value=4.2e+02 Score=23.58 Aligned_cols=17 Identities=18% Similarity=0.483 Sum_probs=12.5
Q ss_pred CCcceeee-CCEEEEEec
Q psy1098 317 AGHCASVI-NSRMYIWSG 333 (390)
Q Consensus 317 ~~~~~~~~-~~~l~v~GG 333 (390)
..|+++.. +++||.+|=
T Consensus 338 ~~hs~alt~~G~v~~wG~ 355 (406)
T 4d9s_A 338 WRHTLAVTERNNVFAWGR 355 (406)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEeCCCCEEEecC
Confidence 34666666 688999984
No 282
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=20.11 E-value=1.4e+02 Score=26.25 Aligned_cols=104 Identities=12% Similarity=0.180 Sum_probs=49.0
Q ss_pred eeeeecCCCceeeeeccccCCCCCCCCceeeeEEeeccCCCcEEEEEcC-CCCCccCcEEEEecCCCeEeecccCCC--C
Q psy1098 170 FYTLELKSGHTTVWDMPGTYGGLPSPRESHTACSWTDEYKNTKLIIYGG-MSGNRLSDLFMLDINSMTWQKPQILGP--Q 246 (390)
Q Consensus 170 ~~~~d~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~~~~~i~v~GG-~~~~~~~~v~~~d~~~~~W~~~~~~~~--~ 246 (390)
++.+|..++. ..|+.-.. ...|.-........ .++.++++.. .+ ..++.++..++.|.-....+. .
T Consensus 22 l~Ald~~tG~-~~W~~~~~-~~~p~~~~~~~~~~-----~~~~~~vv~p~~d----G~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 22 LHAVDRRNGH-IIWSIEPE-NFQPLIEIQEPSRL-----ETYETLIIEPFGD----GNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEETTTTE-EEEEECGG-GSCCSEECCCSCTT-----TSSEEEEECCSTT----TEEEEEETTTEEEEEEEEHHHHHT
T ss_pred EEEEECCCCc-EEEEecCC-ccCCcEEecCCccc-----cCCcEEEEEECCC----CEEEEEECCCCcEEeeecccccee
Confidence 7888877653 57986322 00111000000000 1456666643 23 357888888766543111000 1
Q ss_pred CCCCceeeEEEE-------CCEEEEEcCcccCCCccccccccccceecCceEEeecCCCe--eee
Q psy1098 247 PLPRSLHTACVI-------GDRMFIFGGWVPILKDESRSLHEKEWKCSNQLACLHLPEMT--WED 302 (390)
Q Consensus 247 p~~r~~~~~~~~-------~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--W~~ 302 (390)
..|....+.-++ .+..+++|+. ...++.+|+.+.+ |+.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~------------------~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSM------------------RTIMYTINMLNGEIISAF 137 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEE------------------EEEEEEEETTTCCEEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEec------------------CCEEEEEECCCCcEEEEE
Confidence 112221222222 5556666664 4578889888775 665
Done!