BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10988
(1857 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q15643|TRIPB_HUMAN Thyroid receptor-interacting protein 11 OS=Homo sapiens GN=TRIP11
PE=1 SV=3
Length = 1979
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 203/385 (52%), Gaps = 49/385 (12%)
Query: 1487 QEREVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQH 1546
QE+ VV Q +ER+++ L L+ Q E T L E+ LR + E ERL+ H
Sbjct: 1536 QEKTVVFQ--------QERDQVMLALKQKQMENTALQNEVQRLRDKEFRSNQELERLRNH 1587
Query: 1547 LLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKS 1606
LL++E+ T E + AE L K+ EE++ SS+ A +AS +++ QVE+L Q+
Sbjct: 1588 LLESEDSYTREALAAEDREAKLRKKVTVLEEKLVSSSNAMENASHQASVQVESLQEQLNV 1647
Query: 1607 LTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYA 1666
+++Q+++ +L +++ V+++ SL NLQ+VLE FQ E+ + LE Q +L +
Sbjct: 1648 VSKQRDETALQLSVSQEQVKQYALSLANLQMVLEHFQQEEKAMYSAELEK-QKQLIAEWK 1706
Query: 1667 KNNE-LTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEE-LNKKE 1724
KN E L + +LQ L EA +L +A RL++QL+ K + I+EL ++ N+L +E L+ +
Sbjct: 1707 KNAENLEGKVISLQECLDEANAALDSASRLTEQLDVKEEQIEEL-KRQNELRQEMLDDVQ 1765
Query: 1725 AKLKEVNNG--GKVDKCLVTNMIVNFLTAPSRPSRHQALQILASVIDMTPQDRQKI---- 1778
KL + N GKVDK L+ N+ + P + RH+ L+++ S++ + ++ +++
Sbjct: 1766 KKLMSLANSSEGKVDKVLMRNLFIGHFHTP-KNQRHEVLRLMGSILGVRREEMEQLFHDD 1824
Query: 1779 --GLE--------------PSQAFNPNQ------SLSEAFIQFLESES-----SPRSKAQ 1811
G+ P+ PNQ S SE F++FLE+ES P+
Sbjct: 1825 QGGVTRWMTGWLGGGSKSVPNTPLRPNQQSVVNSSFSELFVKFLETESHPSIPPPKLSVH 1884
Query: 1812 SSTPV---SRRTSSTTSPLLFPESA 1833
P+ RR T +P F ++A
Sbjct: 1885 DMKPLDSPGRRKRDTNAPESFKDTA 1909
>sp|Q10411|SPO15_SCHPO Sporulation-specific protein 15 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=spo15 PE=1 SV=1
Length = 1957
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 226/951 (23%), Positives = 418/951 (43%), Gaps = 173/951 (18%)
Query: 193 KKDEVIEKLKAELESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVI 252
KK++ EK+K ++ S++ +L E E+ N G +E LEKL+V + + +
Sbjct: 219 KKEKDYEKIKEDVSSIKASLAE-----EQASNKSLRGE----QERLEKLLVSSNKTVSTL 269
Query: 253 QNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWT 312
+ E L A+ ++E+ E + + E +++ELK V ++ K++ +E +
Sbjct: 270 RQTEN---SLRAECKTLQEKLE-KCAINEEDSKLLEELKHNVANYSDAIVHKDKLIEDLS 325
Query: 313 DN----DNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMEL 368
DN S E+D ++K NE++ EKL + +T+ LK S + QL E+ +EL
Sbjct: 326 TRISEFDNLKS---ERDTLSIK--NEKL-EKLLR--NTIGSLK-DSRTSNSQLEEEMVEL 376
Query: 369 EEWGN--NDSWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGD 426
+E + KL++ +QENK L + E Q L S ++ +K+ + LE+
Sbjct: 377 KESNRTIHSQLTDAESKLSSFEQENKSLKGSIDEYQNNLSSKDKMVKQVSSQLEEARSSL 436
Query: 427 DWGTGNSTELNNLR----AKCSEFEKTIVELK-----SQEELL-KQALIDKENELSEWGQ 476
TG E+N+ R K +FEK +L+ S EL K ALIDK+++
Sbjct: 437 AHATGKLAEINSERDFQNKKIKDFEKIEQDLRACLNSSSNELKEKSALIDKKDQ------ 490
Query: 477 TNEWGSPSSSDLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQG--TSSHSHPV-DQQ 533
+LN LRE+ + EQK + ++ L++ Q+ H V + Q
Sbjct: 491 ----------ELNNLREQ-------IKEQKKVSESTQSSLQSLQRDILNEKKKHEVYESQ 533
Query: 534 VQDRESRIEMLSRENEGLRTRVEQL-----GLVIENNYVQESDPMNNSLDNTAQLTAEKE 588
+ + + ++ +E L +++ L V NN + ES +L N Q E
Sbjct: 534 LNELKGELQTEISNSEHLSSQLSTLAAEKEAAVATNNELSESKNSLQTLCNAFQ-----E 588
Query: 589 RLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEK 648
+L + V L +EN + L+ + +K L E Q+LE + + +QL K
Sbjct: 589 KLAKSVMQL-KENEQNFSSLDTSFKK---LNESHQELENNHQTITKQL-----------K 633
Query: 649 TLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDID 708
+++Q+L + N E + E L K +L+E + + +K E D+D
Sbjct: 634 DTSSKLQQLQLERANFEQKESTLSDENNDLRTKLLKLEESNKSLIKKQE--------DVD 685
Query: 709 TLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEA 768
+L KN+Q+ KE+L + + L K+E +NL +DNL ++ TL +NDL +
Sbjct: 686 SLEKNIQTLKEDLRK---SEEALRFSKLEAKNLREVIDNLKGKHE----TLEAQRNDLHS 738
Query: 769 KISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNE 828
+S+ N NA L + +E
Sbjct: 739 SLSDAKNT---------------------NAILSSEL------------------TKSSE 759
Query: 829 NIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIENQ------ 882
+++ ++ LTQ++ +K + S Q + L DD++ +++Q
Sbjct: 760 DVKRLTANVETLTQDSKAMKQSFTSLVNSYQSISN----LYHELRDDHVNMQSQNNTLLE 815
Query: 883 ---QLKQNLESVKQENTLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELES 939
+LK + E++ Q+N +++N+Q L+ K +KV+EL + K L S
Sbjct: 816 SESKLKTDCENLTQQNMTLIDNVQKLM-HKHVNQESKVSELKEVNGKLSL---DLKNLRS 871
Query: 940 TLDAKLTD----FSTKEQLNKN------KMAELSAMLESVQAENISIKQMNEELQALTET 989
+L+ ++D + +L+KN + A+L++ L+S++AE + NEEL +
Sbjct: 872 SLNVAISDNDQILTQLAELSKNYDSLEQESAQLNSGLKSLEAEKQLLHTENEELHIRLDK 931
Query: 990 LKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHV 1049
L E L + QE + L EE S++ I +++ +L + L + +
Sbjct: 932 LTGKLKIEESKSSDLGKKLTARQEEISNLKEENMSQSQAITSVK---SKLDETLSKSSKL 988
Query: 1050 ENELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNA 1100
E ++ ++KV E+E + L A + + + + ++ LQT+++ A
Sbjct: 989 EADIEHLKNKVSEVEVERNALLASNERLMDDLKNNGENIASLQTEIEKKRA 1039
>sp|Q922J3|CLIP1_MOUSE CAP-Gly domain-containing linker protein 1 OS=Mus musculus GN=Clip1
PE=1 SV=1
Length = 1391
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 127/256 (49%), Gaps = 34/256 (13%)
Query: 561 VIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEE 620
V++ Y ++S+ + N T+QL+A KE+L ++ L + N E K +LE ++ +G E+
Sbjct: 700 VLQAKYTEQSEVIGNF---TSQLSAVKEKL-LDLDALRKANSEGKLELETLRQQLEGAEK 755
Query: 621 EIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDG 680
+I+ LE ++ + S ++ E+QE L ++ +NQ K+ L+
Sbjct: 756 QIKNLE-----------TERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEK 804
Query: 681 KYEELKEKYEQMSEKFENQTGKDSVDIDTLIKN----LQSKKEELCRLLDE----KNTLD 732
+ + LKEK+ SE ++V T +++ L K+E+ L E + L
Sbjct: 805 ELQTLKEKFASTSE--------EAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLT 856
Query: 733 NIKV---EKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISELNNAQHNKNNEINDLNK 789
+++ EK++ E QL ++ I +++ D ++++++N+ K + +L
Sbjct: 857 DMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQL 916
Query: 790 RISLFEENNAFLQRSI 805
+++ EN +FLQ+SI
Sbjct: 917 KLTKANENASFLQKSI 932
>sp|P21249|ANT1_ONCVO Major antigen OS=Onchocerca volvulus GN=OVT1 PE=2 SV=2
Length = 2022
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 175/725 (24%), Positives = 308/725 (42%), Gaps = 140/725 (19%)
Query: 1076 QWIHEFEVKTNTLSDLQTQLDTYNAKITH------AALVEQE-LGEMKNQMQTLEYEKQE 1128
++I E + D TQ+ T AK++ AA E E L EM N++Q +K +
Sbjct: 702 EYITEVTIIRRQNDDFDTQMKTNQAKLSSMKNSLIAAKKEIEKLSEMNNRLQQ---DKND 758
Query: 1129 LLKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTLEAQLKELADN 1188
L+ Q+ N L +++ ++ F +K DN L + T + L E L
Sbjct: 759 LIGAKQKGDTELNLLTEKIRKVEIEFERIKKDNQELEDHERTARDD-LKQETNRNHLLAK 817
Query: 1189 ETQYKQMQIVYEDTQRKLNEELARRDATIAT-LNTT--GAPDLNASIENILKEKDATLSE 1245
E + + IV LN+ LA+ DA L+ T +P A E I K +++ +
Sbjct: 818 ELEEARADIV------ALNDRLAKMDANFKIKLDETIKKSP---ADHETI-KSRESKSEK 867
Query: 1246 MLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELRTE----------------DLEYK 1289
++ K E K + + +A LEK S+K EK + L+ E DL+ K
Sbjct: 868 IIVKHETKIYEINKYRAELEKLESDKDDLEKRIIGLQDELNEKDRDTDRLNAEIDDLKRK 927
Query: 1290 LQ-EKEKMIQELNEMKQSFFIGDSKDSVRYSDEEHVQELRELQLMN------ESLQNEVL 1342
LQ E EK+ +E +++ + I DEE +++ MN S N+
Sbjct: 928 LQTEIEKVRKETTTVQERYHIE--------WDEERDNHQKKIDSMNALIDELRSKLNDAE 979
Query: 1343 RSATEIDNMKETITYLEQYNLQLSKSQESSTTLTLLQSELAEQRTLNQQLVQIVNTKH-- 1400
R+ ++ N +++I E + + KS + L L+ EL R ++ + NT
Sbjct: 980 RAMADLQN-RDSILERENNDWK-EKSDALNMELDRLRDELLSVRRDAEKEINRYNTDLQT 1037
Query: 1401 ---------TESNN--------YHQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSE 1443
T +NN +I LN +++++ K++DL G+V LE +LK
Sbjct: 1038 AARNEIKLLTPTNNEMKSQLNAAEDKINSLNKVITDQQNKIRDLTGEVHHLEGELKDAKG 1097
Query: 1444 TLATKERQLAETKEQLSL-----AQSQLE------EVTQLMSSNDRPEADGEPAQEREVV 1492
+A E +L T+E++ L A Q E ++ L ND
Sbjct: 1098 NVANLESELDTTRERIHLLGEQNASLQTELNKIKGDIDSLFGEND--------------- 1142
Query: 1493 AQHVAPVETSRERNE-----LALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHL 1547
++T++E NE L +LQ E ++ LR + L N L +
Sbjct: 1143 -----MLKTAKESNEAEIDRLKQKLQRSIENAKKYSDALDKLRPEYDRLQN----LYREK 1193
Query: 1548 LKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSL 1607
+K E+ T Q +QDL +L ++ ++ + T + S AL S+V+ L
Sbjct: 1194 IKQAENLT-------QAVQDLESRLNQSRRELRDA----TDKLIASEGDRNALRSEVEKL 1242
Query: 1608 TEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEI--AQSLEFLQGELNNSY 1665
+ + ++E+L + D ++QA+L++L + + +D + Q+LE + E+N+
Sbjct: 1243 QHEVQFMREQLLRKTD---EYQAALSDL---VNAHRTAEDGRVNAVQALEARKYEINDLQ 1296
Query: 1666 AKNNELTQLISTLQHQ---LQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELNK 1722
++ + Q + TLQ ++ R+ L A R + ++ TI V++ M+E K
Sbjct: 1297 SRLDNAEQYLVTLQQNYVAVENERDMLYDALRRLHSMIDRTVTINRFLIGVDESMDE--K 1354
Query: 1723 KEAKL 1727
KE L
Sbjct: 1355 KETVL 1359
>sp|Q9Y623|MYH4_HUMAN Myosin-4 OS=Homo sapiens GN=MYH4 PE=1 SV=2
Length = 1939
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 182/393 (46%), Gaps = 41/393 (10%)
Query: 37 SDNSDEISEAYDMLQNEYDDLKQKFDEVVNRTKSD-NGNQTEVPTTSTVRNGFELMPNVE 95
+D+ E+ E D LQ +KQK ++ + K + N + + T S + FE M
Sbjct: 1201 ADSVAELGEQIDSLQR----VKQKLEKEKSELKMEINDLASNMETVSKAKANFEKM---- 1252
Query: 96 DYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTE 155
R L +++S++KTKE E I EL + + + S QL+EK +SQL+
Sbjct: 1253 -----CRTLEDQLSEIKTKEEEQQRLINELSAQKARLHTESGEFSRQLDEKDAMVSQLSR 1307
Query: 156 HNRFLQEEMQSLKDKLRDLDENVTVED-IKKANESAIAKKDEVIEKLKAELES---VEKA 211
+ ++++ LK R L+E + + A +SA D + E+ + E E+ +++
Sbjct: 1308 GKQAFTQQIEELK---RQLEEETKAKSTLAHALQSARHDCDLLREQYEEEQEAKAELQRG 1364
Query: 212 LREKESEVEEWGN---NDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTR 268
+ + SEV +W DA +++++E +KL Q+ E ++ + A LE R
Sbjct: 1365 MSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEEHVEAVNSKCASLEKTKQR 1424
Query: 269 VKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQK--EQELEGWTDNDNWGSSGNEQDI 326
++ E E D M+ +S + KQ+ ++ L W + ++
Sbjct: 1425 LQNEVE---------DLMIDVERSNAACIALDKKQRNFDKVLAEWKQK----YEETQAEL 1471
Query: 327 EALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKLAT 386
EA +KE+ + +L K ++ + H E+L+++ + E+ + + GG + +
Sbjct: 1472 EASQKESRSLSTELFKVKNAYEESLDHLETLKRENKNLQQEISDLTEQIAEGGKH--IHE 1529
Query: 387 LQQENKVLNEKVSELQTQLLSVEEALKKKENDL 419
L++ K L+ + SELQT L E +L+ +E +
Sbjct: 1530 LEKVKKQLDHEKSELQTSLEEAEASLEHEEGKI 1562
>sp|P49025|CTRO_MOUSE Citron Rho-interacting kinase OS=Mus musculus GN=Cit PE=1 SV=3
Length = 2055
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 66/117 (56%), Gaps = 8/117 (6%)
Query: 604 LKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLIN 663
+KKKL +A E++ LE ++++LE ++ R + KD + +T +IQ++ K++
Sbjct: 685 IKKKLVEAEERRHSLENKVKRLE---TMERRENRLKDDI-----QTKSEQIQQMADKILE 736
Query: 664 VEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEE 720
+E +AQV Q L+ ++ ++ YE+ + +NQ KD D ++L +Q +EE
Sbjct: 737 LEEKHREAQVSAQHLEVHLKQKEQHYEEKIKVLDNQIKKDLADKESLENMMQRHEEE 793
>sp|P12270|TPR_HUMAN Nucleoprotein TPR OS=Homo sapiens GN=TPR PE=1 SV=3
Length = 2363
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 252 IQNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLE------ASLKQKE 305
+ N++ LI L+ DL +V+ EKE + L DA + +++ KV+T+ K +
Sbjct: 1389 LTNNQNLIQSLKEDLNKVRTEKET-IQKDL--DAKIIDIQEKVKTITQVKKIGRRYKTQY 1445
Query: 306 QELEGWTDN---DNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLL 362
+EL+ D + SSG+ Q+ +E +E+KE L + E+ L++ E+LQK L
Sbjct: 1446 EELKAQQDKVMETSAQSSGDHQEQHVSVQEMQELKETLNQAETKSKSLESQVENLQKTLS 1505
Query: 363 EKEME 367
EKE E
Sbjct: 1506 EKETE 1510
>sp|P85001|CE290_DANRE Centrosomal protein of 290 kDa OS=Danio rerio GN=cep290 PE=2 SV=1
Length = 2439
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 121/250 (48%), Gaps = 32/250 (12%)
Query: 647 EKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVD 706
E +L+ +++ L+ L + N+ Q EK+AL+ ELK+K +++S + Q D
Sbjct: 1794 ENSLKEDLETLNKDLQRSQKSQNKLQSEKEALEEHLNELKKKIQRLSSGLQAQVESDGPT 1853
Query: 707 IDTLIKNLQSKKEELCR-----LLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQ 761
+D+L K ++ + EL R D+++TL K KE + +
Sbjct: 1854 VDSLQKKIRKLEHELDRKSISEPADKRSTLKEDKSSKEEV----------------VRWE 1897
Query: 762 SKNDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNE 821
+A++ ++ N K E++ K+++ +E + L++ + L++ L K +
Sbjct: 1898 EGKKWQARVDKMRNVLKEKEREVDSQAKQLATMKELYSRLEQEKVSLQKKL--KGRGVTA 1955
Query: 822 KEISYNENIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIEN 881
++ +EA + +I++L + AEL Q +++KQ+QAL A ++D I I N
Sbjct: 1956 DQVVGARTLEA-DKEIEELHKRN----AELEQQ---IKVMKQQQALPRDAAMED-ITIRN 2006
Query: 882 QQLKQNLESV 891
+ L++ L S+
Sbjct: 2007 RYLEERLYSM 2016
>sp|O61308|PUMA_PARUN 227 kDa spindle- and centromere-associated protein OS=Parascaris
univalens GN=PUMA1 PE=2 SV=1
Length = 1955
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 26/156 (16%)
Query: 91 MPNVEDYNEKIR----ALNEEVSQLKTKENELHSRIEEL---EDKLQQKIDDEKSVSYQL 143
+ N+E E +R A N+ V+ L T NE S+I EL E +L++ + D ++ S +
Sbjct: 1008 LKNLERVCETLRSQLTAANDRVASLNTTINEQTSKIRELNSHEHRLEEDLADSRATSSAI 1067
Query: 144 EE----KAIEISQLTEHNRFLQEEMQSLKDKLRDLDENV-TVEDIKKANESAIAK----- 193
E + EHN LQ E + K ++ L + T+ + K++ ES + +
Sbjct: 1068 ENDLGNATGRLRSSEEHNAILQSENRKSKTEIEALKHQIDTIMNTKESCESEVERLKKKI 1127
Query: 194 ---------KDEVIEKLKAELESVEKALREKESEVE 220
++E IEKL+ E + +E+ REK EV+
Sbjct: 1128 VQTTTITKEQNEKIEKLRIEHDHLERDYREKTKEVD 1163
>sp|Q9UKX3|MYH13_HUMAN Myosin-13 OS=Homo sapiens GN=MYH13 PE=1 SV=2
Length = 1938
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 177/381 (46%), Gaps = 73/381 (19%)
Query: 37 SDNSDEISEAYDMLQN-------EYDDLKQKFDEVVNRTKSDNGNQTEV-PTTSTVRNGF 88
+D+ E+ E D LQ E +LK + D++ + ++ + +++ + T TV + F
Sbjct: 1201 ADSVAELGEQIDNLQRVKQKLEKEKSELKMEIDDMASNIEALSKSKSNIERTCRTVEDQF 1260
Query: 89 -ELMPNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKA 147
E+ E + I LN + ++L+T+ EL R+EE E + Q +++++ QLEE
Sbjct: 1261 SEIKAKDEQQTQLIHDLNMQKARLQTQNGELSHRVEEKESLISQLTKSKQALTQQLEELK 1320
Query: 148 IEISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELES 207
++ + T+ + +QS + D ++ E ++ E+ KAEL
Sbjct: 1321 RQMEEETKAKNAMAHALQSSRH-----DCDLLREQYEEEQEA------------KAEL-- 1361
Query: 208 VEKALREKESEVEEWGN---NDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEA 264
++AL + SEV +W DA +++++E +KL Q L E +N ET +K A
Sbjct: 1362 -QRALSKANSEVAQWRTKYETDAIQRTEELEEAKKKLA---QRLQEAEENTETANSKC-A 1416
Query: 265 DLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQ 324
L + K+ + EV + ++++L+ + T A+L +K++ +
Sbjct: 1417 SLEKTKQRLQGEV------EDLMRDLE-RSHTACATLDKKQRNFD--------------- 1454
Query: 325 DIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKL 384
K E K+KL + ++ L + S SL +L + EE D+L
Sbjct: 1455 ------KVLAEWKQKLDESQAELEAAQKESRSLSTELFKMRNAYEEVV---------DQL 1499
Query: 385 ATLQQENKVLNEKVSELQTQL 405
TL++ENK L E++S+L Q+
Sbjct: 1500 ETLRRENKNLQEEISDLTEQI 1520
>sp|Q9BE40|MYH1_BOVIN Myosin-1 OS=Bos taurus GN=MYH1 PE=2 SV=2
Length = 1938
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
Query: 101 IRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFL 160
RAL +++S+LKTKE+E I +L + + + S QL+EK +SQL+ +
Sbjct: 1252 CRALEDQLSELKTKEDEQQRLINDLTTQRARLQTESGEFSRQLDEKDALVSQLSRGKQAF 1311
Query: 161 QEEMQSLKDKLRDLDENVTVED-IKKANESAIAKKDEVIEKLKAELES---VEKALREKE 216
++++ LK R L+E + + + A +SA D + E+ + E E +++A+ +
Sbjct: 1312 TQQIEELK---RQLEEEIKAKSALAHALQSARHDCDLLREQYEEEQEGKAELQRAMSKAN 1368
Query: 217 SEVEEW 222
SEV +W
Sbjct: 1369 SEVAQW 1374
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.304 0.122 0.309
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 605,156,731
Number of Sequences: 539616
Number of extensions: 26141648
Number of successful extensions: 247521
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 6828
Number of HSP's that attempted gapping in prelim test: 139360
Number of HSP's gapped (non-prelim): 54246
length of query: 1857
length of database: 191,569,459
effective HSP length: 132
effective length of query: 1725
effective length of database: 120,340,147
effective search space: 207586753575
effective search space used: 207586753575
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 69 (31.2 bits)